Query 024681
Match_columns 264
No_of_seqs 426 out of 1316
Neff 12.1
Searched_HMMs 46136
Date Fri Mar 29 06:33:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024681.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024681hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 6.5E-40 1.4E-44 246.1 24.2 253 7-264 19-293 (294)
2 PRK10349 carboxylesterase BioH 100.0 1.6E-39 3.4E-44 239.4 22.5 247 6-263 2-254 (256)
3 TIGR02240 PHA_depoly_arom poly 100.0 2.5E-39 5.5E-44 240.6 21.0 247 7-264 13-265 (276)
4 PLN02679 hydrolase, alpha/beta 100.0 8.5E-38 1.9E-42 239.4 24.4 252 7-264 73-356 (360)
5 PRK03592 haloalkane dehalogena 100.0 8.5E-38 1.9E-42 234.7 22.8 247 7-264 18-288 (295)
6 PRK00870 haloalkane dehalogena 100.0 2E-37 4.3E-42 233.3 21.3 246 6-264 34-300 (302)
7 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.6E-37 5.7E-42 227.3 20.9 247 7-263 1-251 (251)
8 TIGR01738 bioH putative pimelo 100.0 5.5E-37 1.2E-41 224.8 21.8 239 14-262 1-245 (245)
9 PLN02578 hydrolase 100.0 2.3E-36 5E-41 231.4 25.0 248 7-263 77-353 (354)
10 TIGR03611 RutD pyrimidine util 100.0 4.5E-37 9.8E-42 226.9 19.5 246 8-264 1-257 (257)
11 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.1E-36 4.6E-41 226.2 23.0 247 6-264 20-282 (282)
12 PRK03204 haloalkane dehalogena 100.0 1.2E-36 2.7E-41 226.5 21.1 244 7-263 25-286 (286)
13 KOG4178 Soluble epoxide hydrol 100.0 4.9E-36 1.1E-40 214.8 22.5 257 6-264 32-319 (322)
14 PLN02965 Probable pheophorbida 100.0 2.2E-36 4.7E-41 222.3 21.0 232 19-263 5-251 (255)
15 PRK10673 acyl-CoA esterase; Pr 100.0 4.7E-36 1E-40 221.1 22.9 234 16-264 15-254 (255)
16 TIGR03056 bchO_mg_che_rel puta 100.0 6.2E-36 1.4E-40 223.3 23.1 252 7-263 17-278 (278)
17 PRK06489 hypothetical protein; 100.0 1.6E-35 3.4E-40 227.4 23.7 250 6-264 50-356 (360)
18 PLN03084 alpha/beta hydrolase 100.0 6.2E-35 1.3E-39 222.5 25.1 250 6-264 115-383 (383)
19 PRK11126 2-succinyl-6-hydroxy- 100.0 1E-35 2.2E-40 217.6 19.8 234 17-264 2-241 (242)
20 PLN03087 BODYGUARD 1 domain co 100.0 4.2E-35 9E-40 227.5 22.5 252 6-264 186-478 (481)
21 PLN02385 hydrolase; alpha/beta 100.0 2.9E-35 6.2E-40 225.4 19.5 246 7-263 73-343 (349)
22 PRK07581 hypothetical protein; 100.0 3.2E-34 7E-39 219.1 23.3 258 6-264 26-335 (339)
23 KOG4409 Predicted hydrolase/ac 100.0 3.7E-34 7.9E-39 205.8 21.6 254 9-263 82-362 (365)
24 PRK08775 homoserine O-acetyltr 100.0 8.7E-35 1.9E-39 222.1 19.4 244 7-264 47-338 (343)
25 PRK10749 lysophospholipase L2; 100.0 4.1E-34 8.8E-39 217.1 21.2 251 7-264 42-328 (330)
26 TIGR01392 homoserO_Ac_trn homo 100.0 4.7E-34 1E-38 218.7 21.5 256 6-263 16-351 (351)
27 PRK00175 metX homoserine O-ace 100.0 8.1E-34 1.7E-38 218.8 21.7 256 7-264 34-373 (379)
28 PHA02857 monoglyceride lipase; 100.0 1.5E-33 3.2E-38 210.0 20.3 246 7-263 12-271 (276)
29 PF12697 Abhydrolase_6: Alpha/ 100.0 1.4E-34 3E-39 209.7 14.2 225 20-257 1-228 (228)
30 PLN02211 methyl indole-3-aceta 100.0 8.6E-34 1.9E-38 209.3 17.8 245 7-263 8-268 (273)
31 KOG1454 Predicted hydrolase/ac 100.0 9E-34 2E-38 211.6 16.5 243 16-264 57-323 (326)
32 TIGR03695 menH_SHCHC 2-succiny 100.0 8.6E-33 1.9E-37 203.1 21.6 241 17-263 1-251 (251)
33 PLN02298 hydrolase, alpha/beta 100.0 2.1E-32 4.5E-37 208.5 21.7 249 7-263 44-315 (330)
34 PLN02894 hydrolase, alpha/beta 100.0 1.2E-31 2.6E-36 207.5 25.4 247 16-263 104-383 (402)
35 TIGR01250 pro_imino_pep_2 prol 100.0 1.7E-31 3.7E-36 200.4 24.5 250 7-263 13-288 (288)
36 PRK14875 acetoin dehydrogenase 100.0 1.7E-31 3.7E-36 207.2 20.7 242 7-264 120-370 (371)
37 PLN02980 2-oxoglutarate decarb 100.0 2.4E-31 5.2E-36 234.2 23.6 254 7-264 1359-1638(1655)
38 PLN02652 hydrolase; alpha/beta 100.0 5.4E-31 1.2E-35 202.2 20.4 235 16-263 135-385 (395)
39 TIGR01249 pro_imino_pep_1 prol 100.0 1.4E-30 3.1E-35 196.1 19.6 252 6-262 15-306 (306)
40 COG2267 PldB Lysophospholipase 100.0 4.4E-30 9.6E-35 190.1 21.0 248 6-264 20-293 (298)
41 KOG1455 Lysophospholipase [Lip 100.0 8.1E-30 1.7E-34 180.2 17.4 239 18-264 55-311 (313)
42 PRK06765 homoserine O-acetyltr 100.0 1.1E-28 2.3E-33 188.8 24.9 262 2-264 35-387 (389)
43 KOG2984 Predicted hydrolase [G 100.0 1.4E-30 3.1E-35 172.4 12.1 240 6-264 31-275 (277)
44 PRK05855 short chain dehydroge 100.0 2.5E-29 5.4E-34 206.1 20.5 253 7-263 14-290 (582)
45 PLN02511 hydrolase 100.0 7.6E-29 1.6E-33 191.3 19.1 241 15-263 98-363 (388)
46 COG1647 Esterase/lipase [Gener 100.0 1.6E-28 3.5E-33 165.4 18.1 221 18-264 16-243 (243)
47 KOG2382 Predicted alpha/beta h 100.0 9.9E-29 2.2E-33 177.5 18.2 232 16-264 51-312 (315)
48 TIGR01607 PST-A Plasmodium sub 100.0 4.8E-28 1E-32 183.3 21.0 251 8-263 10-331 (332)
49 PRK10985 putative hydrolase; P 100.0 8.9E-27 1.9E-31 176.5 19.4 242 16-262 57-317 (324)
50 PRK13604 luxD acyl transferase 100.0 1.6E-26 3.4E-31 168.1 19.2 200 16-248 36-247 (307)
51 TIGR03100 hydr1_PEP hydrolase, 100.0 3.4E-26 7.4E-31 169.2 20.9 229 16-264 25-274 (274)
52 PRK05077 frsA fermentation/res 100.0 4.2E-26 9.1E-31 176.8 21.9 210 16-263 193-410 (414)
53 TIGR01838 PHA_synth_I poly(R)- 99.9 2E-25 4.3E-30 175.4 20.0 246 4-252 173-462 (532)
54 PF00561 Abhydrolase_1: alpha/ 99.9 6.2E-27 1.3E-31 170.0 8.5 215 43-259 1-229 (230)
55 PRK10566 esterase; Provisional 99.9 2.5E-24 5.5E-29 158.0 19.9 212 8-264 15-247 (249)
56 PRK11071 esterase YqiA; Provis 99.9 2.5E-24 5.5E-29 149.9 18.4 182 18-263 2-189 (190)
57 TIGR01836 PHA_synth_III_C poly 99.9 1.1E-24 2.4E-29 167.0 18.0 240 17-264 62-349 (350)
58 COG0596 MhpC Predicted hydrola 99.9 7.4E-23 1.6E-27 151.9 21.9 251 7-263 11-280 (282)
59 PLN02872 triacylglycerol lipas 99.9 3.4E-23 7.3E-28 158.7 17.8 245 17-263 74-387 (395)
60 KOG1552 Predicted alpha/beta h 99.9 3.2E-23 7E-28 144.1 14.8 198 2-263 45-250 (258)
61 PF12695 Abhydrolase_5: Alpha/ 99.9 4.1E-23 8.8E-28 139.1 15.0 143 19-245 1-145 (145)
62 COG3208 GrsT Predicted thioest 99.9 1.8E-21 3.9E-26 134.6 19.5 224 16-263 6-234 (244)
63 PRK07868 acyl-CoA synthetase; 99.9 1.4E-21 3.1E-26 167.5 22.1 253 4-263 48-359 (994)
64 COG2021 MET2 Homoserine acetyl 99.9 4.8E-21 1E-25 140.1 20.4 258 7-264 37-367 (368)
65 KOG2564 Predicted acetyltransf 99.9 7E-22 1.5E-26 138.0 13.8 101 16-120 73-181 (343)
66 PF03096 Ndr: Ndr family; Int 99.9 7.3E-22 1.6E-26 140.9 13.3 253 6-263 9-277 (283)
67 PRK11460 putative hydrolase; P 99.9 7E-21 1.5E-25 137.1 17.1 176 15-263 14-210 (232)
68 PF06342 DUF1057: Alpha/beta h 99.9 1.1E-19 2.3E-24 128.4 20.8 231 18-263 36-297 (297)
69 KOG2931 Differentiation-relate 99.9 1.3E-19 2.9E-24 127.7 20.5 253 6-263 32-304 (326)
70 TIGR03101 hydr2_PEP hydrolase, 99.9 1.3E-20 2.8E-25 136.8 13.6 100 17-120 25-133 (266)
71 KOG4667 Predicted esterase [Li 99.9 9.9E-20 2.1E-24 122.5 15.6 200 18-249 34-243 (269)
72 KOG4391 Predicted alpha/beta h 99.9 8.8E-21 1.9E-25 127.7 10.3 196 15-264 76-281 (300)
73 COG1506 DAP2 Dipeptidyl aminop 99.8 5.2E-20 1.1E-24 150.2 16.1 220 2-263 375-614 (620)
74 TIGR01839 PHA_synth_II poly(R) 99.8 7.6E-19 1.6E-23 137.2 19.7 236 3-246 199-482 (560)
75 PLN02442 S-formylglutathione h 99.8 2.1E-18 4.7E-23 128.0 20.7 187 16-247 46-264 (283)
76 PF00326 Peptidase_S9: Prolyl 99.8 5.1E-20 1.1E-24 131.8 10.6 191 33-263 3-207 (213)
77 TIGR02821 fghA_ester_D S-formy 99.8 3.4E-18 7.4E-23 126.7 20.1 106 16-121 41-173 (275)
78 COG0429 Predicted hydrolase of 99.8 5.2E-19 1.1E-23 127.5 14.7 237 16-263 74-338 (345)
79 PLN00021 chlorophyllase 99.8 1.5E-18 3.2E-23 129.5 16.5 172 16-251 51-246 (313)
80 PF02230 Abhydrolase_2: Phosph 99.8 9.9E-18 2.1E-22 119.9 16.6 179 13-263 10-213 (216)
81 PF06500 DUF1100: Alpha/beta h 99.8 4.2E-18 9E-23 128.3 14.9 194 17-247 190-395 (411)
82 KOG1838 Alpha/beta hydrolase [ 99.8 5.4E-17 1.2E-21 121.5 20.5 226 16-250 124-368 (409)
83 TIGR01849 PHB_depoly_PhaZ poly 99.8 2.5E-17 5.3E-22 125.3 17.6 255 5-264 86-405 (406)
84 PF05448 AXE1: Acetyl xylan es 99.8 2.6E-17 5.7E-22 123.0 17.5 225 4-263 68-318 (320)
85 PF00975 Thioesterase: Thioest 99.8 4.8E-17 1E-21 118.0 17.9 219 18-262 1-229 (229)
86 PF01738 DLH: Dienelactone hyd 99.8 2.7E-17 5.9E-22 118.1 16.3 178 16-264 13-216 (218)
87 TIGR01840 esterase_phb esteras 99.8 1.4E-16 3.1E-21 113.7 17.5 106 16-121 12-130 (212)
88 COG3458 Acetyl esterase (deace 99.7 4.9E-17 1.1E-21 113.6 12.9 195 16-246 82-301 (321)
89 TIGR00976 /NonD putative hydro 99.7 9.4E-17 2E-21 130.0 16.5 117 2-123 6-134 (550)
90 TIGR03230 lipo_lipase lipoprot 99.7 4.7E-17 1E-21 125.1 13.4 104 15-122 39-155 (442)
91 COG0412 Dienelactone hydrolase 99.7 4.4E-16 9.6E-21 111.8 17.5 173 5-249 14-206 (236)
92 COG0400 Predicted esterase [Ge 99.7 2.4E-16 5.1E-21 109.6 15.1 173 16-260 17-204 (207)
93 COG4757 Predicted alpha/beta h 99.7 1.1E-16 2.4E-21 109.2 11.8 250 2-262 15-280 (281)
94 PF06821 Ser_hydrolase: Serine 99.7 3.9E-16 8.4E-21 106.2 14.3 158 20-254 1-162 (171)
95 PRK10162 acetyl esterase; Prov 99.7 2.2E-15 4.8E-20 113.9 19.6 105 14-122 78-196 (318)
96 COG2945 Predicted hydrolase of 99.7 4.2E-16 9.2E-21 103.5 12.8 166 16-262 27-204 (210)
97 cd00707 Pancreat_lipase_like P 99.7 9.1E-17 2E-21 118.4 9.9 110 10-123 29-149 (275)
98 TIGR03502 lipase_Pla1_cef extr 99.7 1.2E-15 2.6E-20 124.5 16.3 90 17-106 449-575 (792)
99 KOG2565 Predicted hydrolases o 99.7 1.9E-15 4.1E-20 110.3 14.7 99 18-119 153-262 (469)
100 PF08538 DUF1749: Protein of u 99.7 5.1E-15 1.1E-19 107.3 14.1 239 8-263 23-303 (303)
101 PF05728 UPF0227: Uncharacteri 99.7 5.6E-14 1.2E-18 96.6 18.0 177 20-262 2-186 (187)
102 PF10230 DUF2305: Uncharacteri 99.7 4.5E-14 9.8E-19 103.5 18.7 106 17-123 2-124 (266)
103 PF02129 Peptidase_S15: X-Pro 99.6 7.6E-15 1.6E-19 108.8 14.1 127 1-132 1-147 (272)
104 PRK10115 protease 2; Provision 99.6 5.1E-15 1.1E-19 122.0 14.4 206 2-247 426-655 (686)
105 COG3243 PhaC Poly(3-hydroxyalk 99.6 5.3E-15 1.2E-19 110.3 12.9 237 8-248 96-373 (445)
106 KOG2624 Triglyceride lipase-ch 99.6 6.4E-14 1.4E-18 106.6 13.8 106 15-121 71-199 (403)
107 PRK05371 x-prolyl-dipeptidyl a 99.6 2.3E-13 5.1E-18 113.1 17.9 213 38-263 273-517 (767)
108 PF02273 Acyl_transf_2: Acyl t 99.6 4.1E-13 9E-18 92.9 16.0 202 17-247 30-239 (294)
109 PRK10252 entF enterobactin syn 99.6 1.9E-13 4.1E-18 122.3 18.3 99 17-121 1068-1171(1296)
110 PF09752 DUF2048: Uncharacteri 99.6 2.6E-13 5.5E-18 100.0 14.7 239 16-264 91-348 (348)
111 PF12146 Hydrolase_4: Putative 99.6 2.5E-14 5.4E-19 83.9 7.4 72 7-81 3-79 (79)
112 PF12740 Chlorophyllase2: Chlo 99.5 1.2E-12 2.6E-17 93.4 16.1 172 16-251 16-211 (259)
113 COG3571 Predicted hydrolase of 99.5 2E-12 4.3E-17 83.5 14.4 183 11-263 8-209 (213)
114 COG3545 Predicted esterase of 99.5 2.4E-12 5.1E-17 84.9 14.3 170 18-263 3-177 (181)
115 COG3319 Thioesterase domains o 99.5 5E-12 1.1E-16 90.8 17.1 99 18-122 1-104 (257)
116 PF03959 FSH1: Serine hydrolas 99.5 5.6E-13 1.2E-17 94.8 10.6 166 16-250 3-206 (212)
117 PF06028 DUF915: Alpha/beta hy 99.4 2.3E-11 5E-16 87.8 16.5 203 17-262 11-252 (255)
118 PF07859 Abhydrolase_3: alpha/ 99.4 2.2E-12 4.7E-17 92.4 11.2 95 20-121 1-110 (211)
119 KOG2551 Phospholipase/carboxyh 99.4 1.6E-11 3.5E-16 84.0 14.3 176 16-262 4-221 (230)
120 KOG4627 Kynurenine formamidase 99.4 1.4E-11 3E-16 83.1 13.4 199 10-263 58-269 (270)
121 PTZ00472 serine carboxypeptida 99.4 2.9E-11 6.3E-16 95.5 17.5 104 16-121 76-216 (462)
122 PF10503 Esterase_phd: Esteras 99.4 1.9E-10 4.1E-15 81.2 17.4 105 17-121 16-132 (220)
123 KOG3975 Uncharacterized conser 99.4 2E-10 4.4E-15 79.9 16.7 243 13-263 25-301 (301)
124 KOG3043 Predicted hydrolase re 99.4 6.7E-12 1.5E-16 85.9 9.4 172 18-263 40-238 (242)
125 PF08840 BAAT_C: BAAT / Acyl-C 99.4 6.7E-12 1.5E-16 89.2 9.5 137 86-247 22-164 (213)
126 PF03403 PAF-AH_p_II: Platelet 99.4 2E-11 4.3E-16 93.9 12.3 103 17-120 100-261 (379)
127 PF07224 Chlorophyllase: Chlor 99.3 7.5E-11 1.6E-15 82.9 13.5 101 18-122 47-158 (307)
128 PF07819 PGAP1: PGAP1-like pro 99.3 2.1E-11 4.5E-16 87.2 11.0 102 17-121 4-123 (225)
129 KOG2100 Dipeptidyl aminopeptid 99.3 3.7E-11 8.1E-16 99.9 13.6 199 18-263 527-745 (755)
130 PF06057 VirJ: Bacterial virul 99.3 3.1E-11 6.8E-16 81.5 10.4 94 19-121 4-107 (192)
131 COG0657 Aes Esterase/lipase [L 99.3 4.3E-10 9.4E-15 85.4 17.5 100 16-122 78-192 (312)
132 PRK04940 hypothetical protein; 99.3 1.1E-09 2.3E-14 74.0 16.7 168 20-263 2-178 (180)
133 smart00824 PKS_TE Thioesterase 99.3 5.1E-10 1.1E-14 80.1 16.2 94 22-121 2-102 (212)
134 KOG1515 Arylacetamide deacetyl 99.3 1.5E-09 3.2E-14 81.4 18.4 100 16-122 89-208 (336)
135 COG4188 Predicted dienelactone 99.3 1.9E-11 4.2E-16 90.6 8.3 212 17-254 71-303 (365)
136 KOG2112 Lysophospholipase [Lip 99.2 3.3E-10 7.1E-15 77.2 11.6 175 18-259 4-202 (206)
137 PF11339 DUF3141: Protein of u 99.2 9.3E-09 2E-13 79.5 18.6 80 35-123 92-177 (581)
138 PF12715 Abhydrolase_7: Abhydr 99.2 1.2E-09 2.6E-14 81.9 13.3 101 18-119 116-258 (390)
139 KOG2281 Dipeptidyl aminopeptid 99.2 5.8E-10 1.3E-14 87.7 11.7 219 2-264 623-866 (867)
140 PF05677 DUF818: Chlamydia CHL 99.1 2.8E-08 6E-13 73.2 18.8 85 16-107 136-236 (365)
141 PF01674 Lipase_2: Lipase (cla 99.1 5.4E-11 1.2E-15 83.8 4.6 89 18-107 2-96 (219)
142 PLN02733 phosphatidylcholine-s 99.1 5E-10 1.1E-14 87.3 8.2 90 28-120 105-200 (440)
143 PF00151 Lipase: Lipase; Inte 99.1 4E-10 8.6E-15 85.0 7.4 101 15-123 69-189 (331)
144 COG4099 Predicted peptidase [G 99.1 3.1E-09 6.8E-14 76.2 10.5 98 18-120 192-303 (387)
145 PF00450 Peptidase_S10: Serine 99.1 9.3E-08 2E-12 75.8 20.2 105 16-121 39-181 (415)
146 PF03583 LIP: Secretory lipase 99.1 5.9E-09 1.3E-13 77.7 12.5 60 203-262 218-282 (290)
147 KOG1553 Predicted alpha/beta h 99.1 6.4E-10 1.4E-14 81.3 6.9 114 2-120 224-344 (517)
148 COG2936 Predicted acyl esteras 99.0 6.8E-08 1.5E-12 76.5 15.9 121 2-127 29-165 (563)
149 COG3509 LpqC Poly(3-hydroxybut 99.0 2.2E-08 4.7E-13 72.1 11.9 120 2-121 44-179 (312)
150 COG4814 Uncharacterized protei 98.9 1.7E-07 3.7E-12 65.9 15.2 102 19-120 47-175 (288)
151 PF05057 DUF676: Putative seri 98.9 2.9E-08 6.3E-13 71.0 11.8 84 17-105 4-97 (217)
152 KOG3847 Phospholipase A2 (plat 98.9 1.9E-08 4E-13 72.8 9.7 173 16-262 117-345 (399)
153 PF05990 DUF900: Alpha/beta hy 98.9 2.1E-08 4.7E-13 72.2 10.0 102 16-120 17-136 (233)
154 KOG3253 Predicted alpha/beta h 98.9 4.1E-08 8.8E-13 77.2 11.9 158 16-249 175-349 (784)
155 PRK10439 enterobactin/ferric e 98.9 4.4E-07 9.6E-12 71.0 17.6 103 16-120 208-322 (411)
156 PF04301 DUF452: Protein of un 98.9 2.3E-07 4.9E-12 64.9 14.2 81 17-123 11-92 (213)
157 KOG1551 Uncharacterized conser 98.9 2.9E-07 6.2E-12 65.2 14.0 228 18-264 114-365 (371)
158 COG3150 Predicted esterase [Ge 98.8 1.7E-07 3.6E-12 61.6 9.6 86 20-120 2-90 (191)
159 PLN02606 palmitoyl-protein thi 98.8 8.4E-07 1.8E-11 65.0 14.2 97 17-121 26-132 (306)
160 COG1075 LipA Predicted acetylt 98.7 4.8E-08 1E-12 74.4 7.9 97 19-121 61-164 (336)
161 PF05705 DUF829: Eukaryotic pr 98.7 1.6E-06 3.4E-11 63.4 14.5 60 203-262 177-240 (240)
162 KOG4840 Predicted hydrolases o 98.7 1.1E-06 2.3E-11 60.8 11.5 93 18-121 37-144 (299)
163 PF05577 Peptidase_S28: Serine 98.6 4.5E-07 9.7E-12 72.2 11.1 106 16-121 28-148 (434)
164 PF10340 DUF2424: Protein of u 98.6 6.5E-06 1.4E-10 62.6 16.2 105 16-123 121-237 (374)
165 PF12048 DUF3530: Protein of u 98.6 1.2E-05 2.7E-10 60.6 17.7 104 17-120 87-228 (310)
166 PF10142 PhoPQ_related: PhoPQ- 98.5 1.7E-06 3.6E-11 66.0 11.1 148 84-263 170-318 (367)
167 COG1073 Hydrolases of the alph 98.5 3.1E-06 6.7E-11 63.9 12.1 69 196-264 223-296 (299)
168 PF00756 Esterase: Putative es 98.5 7.5E-07 1.6E-11 65.6 7.6 50 71-120 97-149 (251)
169 PF08386 Abhydrolase_4: TAP-li 98.5 8.9E-07 1.9E-11 55.1 6.7 59 204-263 34-92 (103)
170 KOG2541 Palmitoyl protein thio 98.4 6.5E-06 1.4E-10 58.7 11.2 95 18-121 24-128 (296)
171 COG4782 Uncharacterized protei 98.4 2.4E-06 5.1E-11 63.7 9.2 103 15-120 114-233 (377)
172 KOG3101 Esterase D [General fu 98.4 2.6E-06 5.6E-11 58.5 8.3 105 17-121 44-176 (283)
173 PLN02633 palmitoyl protein thi 98.4 2.2E-05 4.8E-10 57.9 13.0 96 18-121 26-131 (314)
174 KOG2183 Prolylcarboxypeptidase 98.4 6.5E-06 1.4E-10 62.4 10.4 107 14-120 77-201 (492)
175 PF02089 Palm_thioest: Palmito 98.3 4.8E-06 1E-10 60.7 8.2 102 17-121 5-116 (279)
176 KOG3724 Negative regulator of 98.3 1.7E-05 3.8E-10 64.9 11.3 96 18-120 90-219 (973)
177 PLN03016 sinapoylglucose-malat 98.2 0.00044 9.6E-09 54.8 18.0 59 204-263 347-429 (433)
178 cd00312 Esterase_lipase Estera 98.2 8.4E-06 1.8E-10 66.3 8.7 102 16-121 94-213 (493)
179 PF11144 DUF2920: Protein of u 98.2 0.0001 2.2E-09 56.5 13.3 34 87-120 185-218 (403)
180 PLN02209 serine carboxypeptida 98.2 0.00069 1.5E-08 53.8 17.8 59 204-263 351-433 (437)
181 KOG1282 Serine carboxypeptidas 98.2 0.0017 3.6E-08 51.4 19.5 59 205-263 364-446 (454)
182 KOG2237 Predicted serine prote 98.1 5.6E-05 1.2E-09 60.7 11.1 105 16-120 469-583 (712)
183 COG1770 PtrB Protease II [Amin 98.1 0.00021 4.5E-09 57.8 13.0 107 16-122 447-563 (682)
184 PLN02213 sinapoylglucose-malat 98.0 0.00069 1.5E-08 51.7 15.5 59 204-263 233-315 (319)
185 COG2939 Carboxypeptidase C (ca 98.0 0.0022 4.7E-08 50.7 17.0 102 16-119 100-234 (498)
186 COG1505 Serine proteases of th 98.0 6.6E-05 1.4E-09 59.9 8.6 194 17-250 421-629 (648)
187 COG2382 Fes Enterochelin ester 97.9 0.00065 1.4E-08 50.0 12.1 115 6-122 83-213 (299)
188 cd00741 Lipase Lipase. Lipase 97.9 5.4E-05 1.2E-09 51.2 6.4 53 69-121 7-67 (153)
189 PF00135 COesterase: Carboxyle 97.9 5.1E-05 1.1E-09 62.5 7.2 104 17-121 125-245 (535)
190 PF02450 LCAT: Lecithin:choles 97.9 5.9E-05 1.3E-09 59.1 7.0 78 32-121 66-160 (389)
191 COG0627 Predicted esterase [Ge 97.8 0.00014 3E-09 54.8 7.5 106 16-122 53-188 (316)
192 PF07082 DUF1350: Protein of u 97.7 0.0082 1.8E-07 43.2 16.7 92 19-119 19-123 (250)
193 KOG3967 Uncharacterized conser 97.7 0.00047 1E-08 47.8 8.4 100 18-120 102-226 (297)
194 PF06259 Abhydrolase_8: Alpha/ 97.7 0.002 4.4E-08 44.2 11.4 53 69-121 87-144 (177)
195 KOG2182 Hydrolytic enzymes of 97.7 0.00028 6E-09 55.2 7.9 106 15-121 84-207 (514)
196 COG2272 PnbA Carboxylesterase 97.6 0.00037 8.1E-09 54.7 8.1 106 16-122 93-218 (491)
197 PF05576 Peptidase_S37: PS-10 97.6 0.00011 2.4E-09 56.1 4.9 119 2-121 48-169 (448)
198 COG4553 DepA Poly-beta-hydroxy 97.6 0.0079 1.7E-07 44.2 13.8 101 17-122 103-210 (415)
199 PF01764 Lipase_3: Lipase (cla 97.6 0.00022 4.9E-09 47.3 5.9 36 71-106 49-84 (140)
200 COG3946 VirJ Type IV secretory 97.6 0.00069 1.5E-08 51.7 8.5 82 18-108 261-348 (456)
201 KOG1202 Animal-type fatty acid 97.6 0.0042 9.2E-08 54.3 13.8 98 15-123 2121-2221(2376)
202 COG2819 Predicted hydrolase of 97.4 0.00052 1.1E-08 49.7 5.3 51 72-122 120-173 (264)
203 PF11187 DUF2974: Protein of u 97.3 0.00093 2E-08 48.0 6.2 47 74-121 73-123 (224)
204 cd00519 Lipase_3 Lipase (class 97.2 0.0014 3.1E-08 47.6 6.2 23 84-106 126-148 (229)
205 COG2830 Uncharacterized protei 97.1 0.011 2.4E-07 39.2 8.9 77 18-120 12-89 (214)
206 KOG2369 Lecithin:cholesterol a 97.1 0.0014 3E-08 51.3 5.4 84 31-120 124-224 (473)
207 COG4287 PqaA PhoPQ-activated p 97.0 0.0021 4.7E-08 48.5 6.0 48 201-248 326-373 (507)
208 PLN02162 triacylglycerol lipas 97.0 0.0031 6.8E-08 49.6 7.0 37 69-105 261-297 (475)
209 PLN02517 phosphatidylcholine-s 97.0 0.0019 4.1E-08 52.3 5.7 80 32-120 157-262 (642)
210 KOG1516 Carboxylesterase and r 97.0 0.0049 1.1E-07 51.1 8.2 103 17-121 112-232 (545)
211 KOG4372 Predicted alpha/beta h 97.0 0.00096 2.1E-08 51.1 3.7 86 18-104 81-168 (405)
212 PLN00413 triacylglycerol lipas 96.9 0.0043 9.3E-08 49.0 7.1 36 70-105 268-303 (479)
213 PLN02571 triacylglycerol lipas 96.7 0.0034 7.4E-08 48.9 5.2 37 70-106 208-246 (413)
214 PF01083 Cutinase: Cutinase; 96.7 0.0045 9.8E-08 42.9 5.3 74 41-121 38-122 (179)
215 PF11288 DUF3089: Protein of u 96.7 0.0048 1E-07 43.4 5.4 68 39-107 41-116 (207)
216 PLN02454 triacylglycerol lipas 96.7 0.004 8.7E-08 48.5 5.4 33 74-106 214-248 (414)
217 PLN02408 phospholipase A1 96.5 0.006 1.3E-07 46.8 5.1 35 72-106 184-220 (365)
218 PLN02310 triacylglycerol lipas 96.4 0.014 3.1E-07 45.4 6.7 37 70-106 189-229 (405)
219 PLN02934 triacylglycerol lipas 96.3 0.0095 2.1E-07 47.5 5.3 36 70-105 305-340 (515)
220 PLN02324 triacylglycerol lipas 96.2 0.012 2.5E-07 46.0 5.1 36 71-106 198-235 (415)
221 PF05277 DUF726: Protein of un 96.2 0.019 4.2E-07 43.9 6.1 38 84-121 218-260 (345)
222 KOG2521 Uncharacterized conser 96.1 0.14 2.9E-06 39.4 10.1 60 204-263 225-288 (350)
223 PLN02847 triacylglycerol lipas 96.0 0.15 3.2E-06 41.9 10.6 21 86-106 251-271 (633)
224 COG4947 Uncharacterized protei 96.0 0.019 4E-07 38.7 4.5 111 7-120 16-135 (227)
225 PLN02802 triacylglycerol lipas 96.0 0.017 3.8E-07 46.1 5.2 36 71-106 313-350 (509)
226 PF06850 PHB_depo_C: PHB de-po 95.9 0.017 3.7E-07 39.9 4.4 61 204-264 134-201 (202)
227 PLN02753 triacylglycerol lipas 95.9 0.018 3.8E-07 46.3 5.0 36 70-105 291-331 (531)
228 PLN03037 lipase class 3 family 95.8 0.02 4.3E-07 45.9 4.9 36 71-106 299-338 (525)
229 PLN02719 triacylglycerol lipas 95.7 0.026 5.7E-07 45.2 5.2 36 71-106 278-318 (518)
230 PF04083 Abhydro_lipase: Parti 95.6 0.015 3.3E-07 32.3 2.8 19 16-34 42-60 (63)
231 PLN02761 lipase class 3 family 95.6 0.026 5.6E-07 45.3 5.0 35 71-105 273-313 (527)
232 KOG4569 Predicted lipase [Lipi 95.2 0.05 1.1E-06 42.0 5.2 37 70-106 155-191 (336)
233 TIGR03712 acc_sec_asp2 accesso 94.3 2.4 5.1E-05 34.3 15.7 106 7-119 278-388 (511)
234 PF08237 PE-PPE: PE-PPE domain 94.3 0.34 7.5E-06 35.0 7.3 63 42-106 2-68 (225)
235 KOG1283 Serine carboxypeptidas 94.0 0.5 1.1E-05 35.7 7.6 102 16-119 30-164 (414)
236 PF07519 Tannase: Tannase and 93.5 0.18 3.9E-06 41.0 5.2 85 36-121 52-150 (474)
237 KOG2029 Uncharacterized conser 92.8 0.31 6.7E-06 39.9 5.4 53 69-121 506-572 (697)
238 COG5153 CVT17 Putative lipase 92.0 0.56 1.2E-05 34.8 5.4 34 84-119 274-307 (425)
239 KOG4540 Putative lipase essent 92.0 0.56 1.2E-05 34.8 5.4 34 84-119 274-307 (425)
240 PF07519 Tannase: Tannase and 91.8 0.4 8.6E-06 39.1 5.1 62 203-264 352-426 (474)
241 PRK12467 peptide synthase; Pro 89.4 3.9 8.4E-05 43.1 10.3 97 17-119 3692-3793(3956)
242 KOG4388 Hormone-sensitive lipa 89.2 1.4 3.1E-05 36.3 5.9 95 19-121 398-508 (880)
243 PF09949 DUF2183: Uncharacteri 88.5 4.2 9.1E-05 25.2 7.6 82 32-116 12-97 (100)
244 KOG2385 Uncharacterized conser 87.9 2.2 4.7E-05 34.7 6.1 40 83-122 444-488 (633)
245 PF03283 PAE: Pectinacetyleste 87.8 4 8.6E-05 32.1 7.5 36 85-120 155-194 (361)
246 PF00698 Acyl_transf_1: Acyl t 83.8 0.97 2.1E-05 34.8 2.5 30 76-105 74-103 (318)
247 smart00827 PKS_AT Acyl transfe 83.3 1.8 3.8E-05 33.0 3.8 30 77-106 73-102 (298)
248 TIGR03131 malonate_mdcH malona 82.8 2 4.3E-05 32.7 3.8 30 77-106 67-96 (295)
249 cd07198 Patatin Patatin-like p 80.5 3.2 6.9E-05 28.6 3.9 33 76-108 16-48 (172)
250 PRK10279 hypothetical protein; 80.5 2.7 5.8E-05 32.1 3.7 33 76-108 23-55 (300)
251 cd07225 Pat_PNPLA6_PNPLA7 Pata 80.5 2.9 6.4E-05 32.0 3.9 33 75-107 32-64 (306)
252 TIGR00128 fabD malonyl CoA-acy 80.0 2.6 5.6E-05 31.9 3.6 29 78-106 74-103 (290)
253 COG1752 RssA Predicted esteras 79.0 3.6 7.8E-05 31.6 4.1 33 76-108 29-61 (306)
254 cd07207 Pat_ExoU_VipD_like Exo 78.7 3.8 8.3E-05 28.8 3.9 32 76-107 17-48 (194)
255 PF11713 Peptidase_C80: Peptid 78.4 2.5 5.4E-05 28.7 2.7 50 48-98 59-116 (157)
256 PF06792 UPF0261: Uncharacteri 78.2 33 0.00073 27.5 10.5 100 18-118 2-127 (403)
257 cd07210 Pat_hypo_W_succinogene 77.5 5 0.00011 29.1 4.3 31 78-108 20-50 (221)
258 COG1073 Hydrolases of the alph 77.4 0.25 5.4E-06 37.2 -2.6 91 16-108 48-154 (299)
259 cd07227 Pat_Fungal_NTE1 Fungal 75.5 4.8 0.0001 30.2 3.8 32 76-107 28-59 (269)
260 COG3673 Uncharacterized conser 74.3 38 0.00083 26.2 8.8 91 15-106 29-142 (423)
261 cd07228 Pat_NTE_like_bacteria 73.8 6.6 0.00014 27.2 4.0 31 78-108 20-50 (175)
262 COG1448 TyrB Aspartate/tyrosin 73.2 28 0.00061 27.5 7.2 84 18-119 172-263 (396)
263 PF05576 Peptidase_S37: PS-10 73.2 2.1 4.6E-05 33.8 1.5 59 201-262 348-411 (448)
264 cd01714 ETF_beta The electron 73.2 16 0.00035 26.1 5.8 48 69-117 93-145 (202)
265 cd07209 Pat_hypo_Ecoli_Z1214_l 72.5 6.5 0.00014 28.4 3.8 33 76-108 16-48 (215)
266 cd07230 Pat_TGL4-5_like Triacy 70.8 2.7 6E-05 33.8 1.7 36 76-111 91-126 (421)
267 TIGR02816 pfaB_fam PfaB family 70.5 6.1 0.00013 32.9 3.6 31 77-107 255-286 (538)
268 PF12242 Eno-Rase_NADH_b: NAD( 69.3 18 0.00039 21.1 4.2 25 84-108 38-62 (78)
269 cd07205 Pat_PNPLA6_PNPLA7_NTE1 69.2 11 0.00024 26.0 4.3 31 77-107 19-49 (175)
270 PF10605 3HBOH: 3HB-oligomer h 67.8 4.4 9.5E-05 33.9 2.2 34 88-121 287-321 (690)
271 PRK02399 hypothetical protein; 66.9 66 0.0014 25.9 11.3 99 18-117 4-128 (406)
272 cd07229 Pat_TGL3_like Triacylg 66.7 4.3 9.4E-05 32.2 2.0 38 77-114 102-139 (391)
273 cd07232 Pat_PLPL Patain-like p 65.8 4 8.6E-05 32.7 1.6 39 76-114 85-123 (407)
274 PF09994 DUF2235: Uncharacteri 64.1 19 0.00041 27.3 4.9 28 79-106 84-112 (277)
275 cd07231 Pat_SDP1-like Sugar-De 63.8 5.6 0.00012 30.5 2.0 32 77-108 87-118 (323)
276 cd07208 Pat_hypo_Ecoli_yjju_li 62.3 14 0.0003 27.6 3.9 33 77-109 17-50 (266)
277 cd07224 Pat_like Patatin-like 61.2 16 0.00034 26.8 3.9 33 76-108 17-51 (233)
278 COG0529 CysC Adenylylsulfate k 60.9 56 0.0012 23.0 7.0 34 17-50 22-59 (197)
279 COG1576 Uncharacterized conser 58.7 55 0.0012 22.2 5.7 56 35-103 59-115 (155)
280 cd07212 Pat_PNPLA9 Patatin-lik 58.1 24 0.00052 27.3 4.6 20 89-108 35-54 (312)
281 COG3887 Predicted signaling pr 58.0 33 0.00071 29.0 5.4 47 71-120 325-377 (655)
282 PF03976 PPK2: Polyphosphate k 57.5 11 0.00025 27.4 2.6 36 16-51 29-68 (228)
283 PF14253 AbiH: Bacteriophage a 57.0 14 0.00031 27.6 3.2 15 84-98 233-247 (270)
284 cd07206 Pat_TGL3-4-5_SDP1 Tria 56.1 17 0.00036 27.8 3.3 29 81-109 92-120 (298)
285 PF10081 Abhydrolase_9: Alpha/ 55.9 24 0.00051 26.7 4.0 36 86-121 109-147 (289)
286 PF08484 Methyltransf_14: C-me 55.9 57 0.0012 22.3 5.6 48 72-119 53-102 (160)
287 TIGR03707 PPK2_P_aer polyphosp 55.7 22 0.00048 26.0 3.8 68 16-99 29-102 (230)
288 cd07204 Pat_PNPLA_like Patatin 55.6 24 0.00051 26.1 4.1 20 89-108 34-53 (243)
289 PF06309 Torsin: Torsin; Inte 55.0 13 0.00028 24.2 2.3 27 14-40 49-77 (127)
290 COG4822 CbiK Cobalamin biosynt 54.9 79 0.0017 22.9 6.4 58 17-91 138-199 (265)
291 TIGR03709 PPK2_rel_1 polyphosp 54.4 20 0.00044 26.8 3.5 35 17-51 55-93 (264)
292 PF00448 SRP54: SRP54-type pro 52.7 82 0.0018 22.4 7.2 65 41-117 82-148 (196)
293 PF02590 SPOUT_MTase: Predicte 52.5 64 0.0014 22.0 5.4 53 34-98 58-111 (155)
294 COG0331 FabD (acyl-carrier-pro 52.3 24 0.00051 27.3 3.7 22 84-105 83-104 (310)
295 COG3933 Transcriptional antite 52.0 1.1E+02 0.0025 25.0 7.2 72 18-103 110-182 (470)
296 PF03610 EIIA-man: PTS system 51.2 61 0.0013 20.5 6.9 72 19-105 2-77 (116)
297 COG3946 VirJ Type IV secretory 50.4 1.3E+02 0.0029 24.4 7.2 101 19-119 50-155 (456)
298 cd01819 Patatin_and_cPLA2 Pata 49.6 32 0.00069 23.3 3.7 28 77-104 17-46 (155)
299 cd07218 Pat_iPLA2 Calcium-inde 49.4 32 0.00068 25.5 3.9 20 89-108 33-52 (245)
300 cd07221 Pat_PNPLA3 Patatin-lik 48.7 33 0.00072 25.5 3.9 22 87-108 33-54 (252)
301 PRK05282 (alpha)-aspartyl dipe 48.5 1.1E+02 0.0024 22.6 6.6 36 16-51 30-70 (233)
302 PF00326 Peptidase_S9: Prolyl 47.4 63 0.0014 23.0 5.2 59 16-82 143-208 (213)
303 KOG2872 Uroporphyrinogen decar 47.1 94 0.002 23.7 5.8 70 18-94 253-336 (359)
304 cd07220 Pat_PNPLA2 Patatin-lik 46.7 36 0.00077 25.4 3.8 22 87-108 37-58 (249)
305 PF12641 Flavodoxin_3: Flavodo 45.8 90 0.002 21.4 5.3 59 204-263 39-97 (160)
306 PF05577 Peptidase_S28: Serine 45.5 29 0.00063 28.2 3.5 40 205-248 377-416 (434)
307 PF01583 APS_kinase: Adenylyls 44.2 39 0.00085 23.0 3.4 35 17-51 1-39 (156)
308 PRK04148 hypothetical protein; 44.1 49 0.0011 21.9 3.7 44 72-119 4-47 (134)
309 COG3621 Patatin [General funct 42.3 95 0.0021 24.3 5.3 53 41-108 7-64 (394)
310 cd00382 beta_CA Carbonic anhyd 41.7 48 0.001 21.3 3.4 31 71-101 44-74 (119)
311 cd07222 Pat_PNPLA4 Patatin-lik 41.4 43 0.00092 24.9 3.5 18 88-105 33-50 (246)
312 TIGR02883 spore_cwlD N-acetylm 39.7 94 0.002 21.9 4.9 40 45-85 2-44 (189)
313 TIGR02069 cyanophycinase cyano 39.6 1.6E+02 0.0035 22.0 6.8 40 12-51 23-66 (250)
314 PF15566 Imm18: Immunity prote 39.3 47 0.001 17.7 2.5 31 69-99 4-34 (52)
315 PF02633 Creatininase: Creatin 39.1 1.3E+02 0.0028 22.1 5.8 38 68-105 83-120 (237)
316 PF13709 DUF4159: Domain of un 38.6 1.4E+02 0.003 21.6 5.6 38 204-242 53-90 (207)
317 cd05312 NAD_bind_1_malic_enz N 38.0 39 0.00084 25.6 2.8 78 19-102 26-122 (279)
318 PF03681 UPF0150: Uncharacteri 37.8 42 0.00091 17.2 2.3 32 41-81 12-43 (48)
319 cd07217 Pat17_PNPLA8_PNPLA9_li 37.4 33 0.00071 27.0 2.5 18 89-106 44-61 (344)
320 COG0218 Predicted GTPase [Gene 37.2 68 0.0015 22.9 3.7 58 202-263 133-197 (200)
321 cd03379 beta_CA_cladeD Carboni 36.8 63 0.0014 21.6 3.5 29 71-99 41-69 (142)
322 PF03490 Varsurf_PPLC: Variant 36.5 65 0.0014 16.9 2.6 24 69-92 8-31 (51)
323 KOG4231 Intracellular membrane 36.5 50 0.0011 27.4 3.4 52 41-107 415-471 (763)
324 cd07213 Pat17_PNPLA8_PNPLA9_li 36.5 34 0.00074 26.0 2.5 19 89-107 37-55 (288)
325 PF01118 Semialdhyde_dh: Semia 36.4 1E+02 0.0022 19.7 4.4 32 87-119 1-33 (121)
326 TIGR00521 coaBC_dfp phosphopan 36.3 2.3E+02 0.0051 22.9 8.6 92 19-119 114-233 (390)
327 cd07211 Pat_PNPLA8 Patatin-lik 35.5 34 0.00073 26.3 2.3 17 89-105 44-60 (308)
328 PRK14194 bifunctional 5,10-met 35.5 97 0.0021 23.9 4.6 34 73-106 143-182 (301)
329 PRK10319 N-acetylmuramoyl-l-al 35.5 1.3E+02 0.0028 23.1 5.3 43 41-84 54-99 (287)
330 PF01734 Patatin: Patatin-like 35.3 34 0.00074 23.6 2.2 21 86-106 27-47 (204)
331 COG1506 DAP2 Dipeptidyl aminop 35.2 1.6E+02 0.0035 25.6 6.4 41 17-57 551-598 (620)
332 KOG4389 Acetylcholinesterase/B 34.8 1.5E+02 0.0033 24.8 5.7 46 75-120 205-254 (601)
333 TIGR02813 omega_3_PfaA polyket 34.3 48 0.0011 34.0 3.6 29 76-104 664-692 (2582)
334 KOG0781 Signal recognition par 34.1 2.5E+02 0.0055 23.6 6.7 86 21-118 442-539 (587)
335 PLN02752 [acyl-carrier protein 34.0 50 0.0011 25.9 3.1 19 88-106 126-144 (343)
336 PF04084 ORC2: Origin recognit 33.4 2.4E+02 0.0052 22.2 7.5 79 21-99 57-150 (326)
337 cd01014 nicotinamidase_related 32.9 1.4E+02 0.003 20.1 4.7 49 74-122 88-136 (155)
338 PRK00103 rRNA large subunit me 32.9 1.6E+02 0.0035 20.1 5.9 52 36-99 60-112 (157)
339 cd00883 beta_CA_cladeA Carboni 32.8 80 0.0017 22.2 3.6 32 72-103 67-98 (182)
340 PRK14974 cell division protein 32.7 2.5E+02 0.0054 22.2 7.8 65 41-117 221-287 (336)
341 PF00484 Pro_CA: Carbonic anhy 32.7 1.4E+02 0.0031 20.0 4.8 35 70-104 39-73 (153)
342 TIGR01425 SRP54_euk signal rec 32.6 2.9E+02 0.0062 22.8 8.5 65 41-117 181-247 (429)
343 COG2230 Cfa Cyclopropane fatty 32.6 1.9E+02 0.0042 22.1 5.7 48 69-117 54-104 (283)
344 TIGR02354 thiF_fam2 thiamine b 32.4 1.4E+02 0.0031 21.3 4.9 41 77-120 13-54 (200)
345 PF06289 FlbD: Flagellar prote 32.3 65 0.0014 17.8 2.4 29 235-263 28-56 (60)
346 TIGR03607 patatin-related prot 31.8 82 0.0018 27.9 4.1 34 72-105 49-85 (739)
347 COG0541 Ffh Signal recognition 31.7 3E+02 0.0064 22.8 6.8 48 70-117 198-247 (451)
348 KOG1752 Glutaredoxin and relat 31.7 1.4E+02 0.0029 18.8 6.3 78 16-108 13-91 (104)
349 COG3727 Vsr DNA G:T-mismatch r 31.7 60 0.0013 21.3 2.5 21 6-26 35-66 (150)
350 COG4667 Predicted esterase of 31.6 55 0.0012 24.6 2.7 41 75-116 29-70 (292)
351 KOG1283 Serine carboxypeptidas 31.5 71 0.0015 24.9 3.3 57 204-261 325-410 (414)
352 PRK03031 rnpA ribonuclease P; 30.8 1.5E+02 0.0033 19.1 5.4 39 36-85 78-117 (122)
353 PRK05723 flavodoxin; Provision 30.8 92 0.002 21.1 3.6 21 68-88 100-120 (151)
354 PF06500 DUF1100: Alpha/beta h 30.6 60 0.0013 26.3 3.0 59 204-263 189-253 (411)
355 COG0145 HyuA N-methylhydantoin 30.2 2.5E+02 0.0054 24.8 6.6 89 19-109 157-255 (674)
356 PHA02114 hypothetical protein 29.7 55 0.0012 20.1 2.0 31 19-49 84-116 (127)
357 PRK11613 folP dihydropteroate 29.6 2.6E+02 0.0057 21.5 6.9 48 41-99 175-224 (282)
358 KOG2170 ATPase of the AAA+ sup 28.8 38 0.00082 26.1 1.5 21 13-33 105-125 (344)
359 PF10686 DUF2493: Protein of u 28.7 81 0.0017 18.1 2.6 10 18-27 32-41 (71)
360 PRK07877 hypothetical protein; 28.5 1.6E+02 0.0035 26.2 5.3 39 80-120 102-140 (722)
361 cd07216 Pat17_PNPLA8_PNPLA9_li 28.4 43 0.00093 25.8 1.9 17 89-105 45-61 (309)
362 PF02882 THF_DHG_CYH_C: Tetrah 28.1 2E+02 0.0044 19.7 4.9 37 70-106 17-59 (160)
363 cd07199 Pat17_PNPLA8_PNPLA9_li 27.3 56 0.0012 24.4 2.3 18 89-106 37-54 (258)
364 PLN03006 carbonate dehydratase 27.1 1.1E+02 0.0024 23.6 3.7 31 72-102 158-188 (301)
365 cd00884 beta_CA_cladeB Carboni 26.9 1.2E+02 0.0027 21.5 3.8 33 72-104 73-105 (190)
366 PRK09004 FMN-binding protein M 26.5 1.3E+02 0.0029 20.1 3.7 15 70-84 99-113 (146)
367 PRK06824 translation initiatio 26.4 1.5E+02 0.0032 19.2 3.6 67 7-85 44-111 (118)
368 PF01751 Toprim: Toprim domain 26.2 1.6E+02 0.0035 17.9 4.0 33 220-253 8-40 (100)
369 cd01012 YcaC_related YcaC rela 26.2 2.1E+02 0.0046 19.3 5.2 48 75-122 78-125 (157)
370 cd08769 DAP_dppA_2 Peptidase M 26.1 2.5E+02 0.0055 21.4 5.4 53 201-260 144-198 (270)
371 PRK08105 flavodoxin; Provision 26.1 1.3E+02 0.0028 20.3 3.6 19 68-86 99-117 (149)
372 cd07214 Pat17_isozyme_like Pat 26.1 52 0.0011 26.0 2.0 18 89-106 46-63 (349)
373 KOG2214 Predicted esterase of 26.0 38 0.00083 27.9 1.2 32 84-115 200-231 (543)
374 cd07219 Pat_PNPLA1 Patatin-lik 25.9 1.1E+02 0.0024 24.5 3.7 19 88-106 46-64 (382)
375 PRK13938 phosphoheptose isomer 25.8 2.5E+02 0.0055 20.0 5.3 24 85-108 45-68 (196)
376 PRK09936 hypothetical protein; 25.8 1.9E+02 0.004 22.3 4.6 30 29-58 36-67 (296)
377 COG0288 CynT Carbonic anhydras 25.8 96 0.0021 22.4 3.1 36 70-105 76-111 (207)
378 cd03131 GATase1_HTS Type 1 glu 25.4 31 0.00067 24.1 0.6 31 76-106 87-117 (175)
379 PRK15219 carbonic anhydrase; P 25.4 75 0.0016 23.6 2.5 32 72-103 129-160 (245)
380 cd05007 SIS_Etherase N-acetylm 25.0 3E+02 0.0066 20.7 5.8 36 74-109 37-73 (257)
381 PRK07053 glutamine amidotransf 24.9 2.9E+02 0.0062 20.4 6.7 31 74-104 70-100 (234)
382 PRK06490 glutamine amidotransf 24.9 2.9E+02 0.0063 20.5 7.8 33 71-103 70-102 (239)
383 cd03144 GATase1_ScBLP_like Typ 24.8 92 0.002 19.9 2.5 15 86-100 76-90 (114)
384 cd07215 Pat17_PNPLA8_PNPLA9_li 24.2 64 0.0014 25.2 2.2 17 89-105 43-59 (329)
385 PF00091 Tubulin: Tubulin/FtsZ 23.8 1.7E+02 0.0036 21.2 4.1 25 75-99 113-137 (216)
386 KOG3086 Predicted dioxygenase 23.7 2.9E+02 0.0063 20.7 5.0 55 68-122 18-80 (296)
387 TIGR03169 Nterm_to_SelD pyridi 23.5 1.3E+02 0.0028 23.7 3.8 35 87-121 1-35 (364)
388 cd01015 CSHase N-carbamoylsarc 23.3 2.4E+02 0.0052 19.5 4.7 47 74-120 103-149 (179)
389 PRK10437 carbonic anhydrase; P 23.3 1.8E+02 0.0039 21.3 4.0 32 72-103 77-108 (220)
390 COG0031 CysK Cysteine synthase 23.2 3.6E+02 0.0079 20.9 11.3 96 19-119 172-291 (300)
391 TIGR00090 iojap_ybeB iojap-lik 23.0 68 0.0015 19.8 1.7 57 36-94 5-68 (99)
392 COG0860 AmiC N-acetylmuramoyl- 23.0 3.2E+02 0.0069 20.2 5.7 40 43-84 42-85 (231)
393 COG0279 GmhA Phosphoheptose is 22.9 1E+02 0.0023 21.3 2.6 73 21-97 44-120 (176)
394 PLN02154 carbonic anhydrase 22.9 1.7E+02 0.0036 22.5 3.9 32 72-103 152-183 (290)
395 PRK05441 murQ N-acetylmuramic 22.7 3.7E+02 0.008 20.8 5.9 24 85-108 62-85 (299)
396 PRK05368 homoserine O-succinyl 22.5 83 0.0018 24.3 2.4 31 76-106 124-154 (302)
397 TIGR00959 ffh signal recogniti 22.5 4.5E+02 0.0097 21.7 7.0 54 41-106 181-234 (428)
398 PLN00416 carbonate dehydratase 22.4 1.7E+02 0.0038 22.0 3.9 33 72-104 126-158 (258)
399 cd00431 cysteine_hydrolases Cy 22.4 2.1E+02 0.0046 19.2 4.2 46 75-120 100-145 (161)
400 PRK10416 signal recognition pa 22.3 3.9E+02 0.0084 20.9 8.2 76 33-117 186-267 (318)
401 KOG1202 Animal-type fatty acid 22.2 78 0.0017 29.9 2.4 25 74-98 570-594 (2376)
402 TIGR03708 poly_P_AMP_trns poly 22.2 1.6E+02 0.0035 24.7 4.1 37 16-52 38-78 (493)
403 COG3007 Uncharacterized paraqu 22.0 3.9E+02 0.0084 20.8 5.8 25 84-108 40-64 (398)
404 PRK10431 N-acetylmuramoyl-l-al 22.0 2.3E+02 0.005 23.4 4.8 39 44-83 192-233 (445)
405 COG1582 FlgEa Uncharacterized 21.9 1.5E+02 0.0032 16.6 2.6 34 228-263 23-56 (67)
406 PF14252 DUF4347: Domain of un 21.6 1.9E+02 0.0041 20.0 3.7 49 31-97 10-60 (165)
407 TIGR03127 RuMP_HxlB 6-phospho 21.5 2.8E+02 0.0061 19.1 4.8 32 76-107 20-52 (179)
408 smart00500 SFM Splicing Factor 21.3 1.3E+02 0.0028 15.4 2.2 24 75-99 5-28 (44)
409 cd00762 NAD_bind_malic_enz NAD 21.3 65 0.0014 24.1 1.6 82 20-103 27-124 (254)
410 PF06792 UPF0261: Uncharacteri 20.7 2.3E+02 0.005 23.0 4.5 40 17-56 184-225 (403)
411 TIGR01158 SUI1_rel translation 20.7 2.1E+02 0.0045 17.9 3.5 34 7-40 27-60 (101)
412 cd01715 ETF_alpha The electron 20.6 2.3E+02 0.0049 19.4 4.1 39 69-108 68-107 (168)
413 PF02353 CMAS: Mycolic acid cy 20.6 1.8E+02 0.004 22.1 3.8 41 74-115 49-92 (273)
414 PHA00490 terminal protein 20.5 1.7E+02 0.0036 20.9 3.3 38 75-113 104-141 (266)
415 PRK09019 translation initiatio 20.3 2.1E+02 0.0045 18.2 3.4 34 7-40 34-67 (108)
416 TIGR00246 tRNA_RlmH_YbeA rRNA 20.3 3E+02 0.0064 18.8 4.6 44 43-99 66-109 (153)
417 cd01985 ETF The electron trans 20.2 3.1E+02 0.0067 19.0 5.6 38 69-107 76-114 (181)
418 cd01311 PDC_hydrolase 2-pyrone 20.2 2.8E+02 0.006 20.8 4.8 46 73-119 30-78 (263)
419 KOG2730 Methylase [General fun 20.0 2.1E+02 0.0046 21.1 3.8 42 68-109 77-118 (263)
420 cd03378 beta_CA_cladeC Carboni 20.0 2.3E+02 0.0049 19.4 3.8 30 72-101 78-107 (154)
421 cd03818 GT1_ExpC_like This fam 20.0 2E+02 0.0043 23.0 4.2 35 20-56 2-38 (396)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.5e-40 Score=246.07 Aligned_cols=253 Identities=22% Similarity=0.280 Sum_probs=171.8
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCC----CcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD----FRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~ 81 (264)
.++|...|+++|+|||+||+++++..|..+++.| ..|+|+++|+||||.|+..... ...| +++++++|+.++++
T Consensus 19 ~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~-~~~~~a~~l~~~l~ 97 (294)
T PLN02824 19 NIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFY-TFETWGEQLNDFCS 97 (294)
T ss_pred EEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccC-CHHHHHHHHHHHHH
Confidence 5788888864579999999999999999999999 8899999999999999754211 1235 49999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh--hhhh-------
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN--YEAW------- 152 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------- 152 (264)
.++.++++|+||||||.+++.+|.++|++|+++|++++........... .........+...+... ...+
T Consensus 98 ~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (294)
T PLN02824 98 DVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQP-WLGRPFIKAFQNLLRETAVGKAFFKSVATP 176 (294)
T ss_pred HhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccc-hhhhHHHHHHHHHHhchhHHHHHHHhhcCH
Confidence 9999999999999999999999999999999999999864322111110 11111111111111000 0000
Q ss_pred --hhhcccccCCC---CChHHHHHHHHhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcchhhHH
Q 024681 153 --AYGYAPLAVGA---DVPAAVREFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAE 224 (264)
Q Consensus 153 --~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 224 (264)
...+....+.. ...+..+.+.... ..+.......... ........+.++++|+++|+|++|.++|.+.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 254 (294)
T PLN02824 177 ETVKNILCQCYHDDSAVTDELVEAILRPG--LEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGR 254 (294)
T ss_pred HHHHHHHHHhccChhhccHHHHHHHHhcc--CCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHH
Confidence 00000000100 0111111111100 1111111111111 111223457889999999999999999999999
Q ss_pred HHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 225 YLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.+..++ +++++++++||+++.|+|+++.+.|.+|+++
T Consensus 255 ~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 255 AYANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred HHHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 98888777 7999999999999999999999999999974
No 2
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.6e-39 Score=239.41 Aligned_cols=247 Identities=19% Similarity=0.327 Sum_probs=170.4
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
..++|...|+++|+|||+||++++...|..+.+.| ++|+|+++|+||||.|+.. ..+ +++++++++.+ +.
T Consensus 2 ~~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~----~~~-~~~~~~~~l~~----~~ 72 (256)
T PRK10349 2 NNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF----GAL-SLADMAEAVLQ----QA 72 (256)
T ss_pred CccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCC----CCC-CHHHHHHHHHh----cC
Confidence 35789999988778999999999999999999999 8999999999999999743 234 37777777653 45
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccc-cCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL-AVGA 163 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 163 (264)
.++++++||||||.+|+.+|.++|++|+++|++++++.......+.. ........+...+..........+... ....
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPG-IKPDVLAGFQQQLSDDFQRTVERFLALQTMGT 151 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCc-ccHHHHHHHHHHHHhchHHHHHHHHHHHHccC
Confidence 68999999999999999999999999999999998655432222211 111111111111111111111111100 0111
Q ss_pred C-ChHHHHHHHHhhcccC-c--hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEe
Q 024681 164 D-VPAAVREFSRTLFNMR-P--DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELL 239 (264)
Q Consensus 164 ~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 239 (264)
. .......+........ + .............+....+.++++|+++++|++|.++|.+..+.+.+.+++ ++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~-~~~~~i 230 (256)
T PRK10349 152 ETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIF 230 (256)
T ss_pred chHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCC-CeEEEe
Confidence 1 1111112222111111 1 111111122234456677889999999999999999999999999999999 899999
Q ss_pred cCCCCcccccChhcHHHHHHHHhc
Q 024681 240 KIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 240 ~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++||++++|+|++|.+.+.+|-+
T Consensus 231 ~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 231 AKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999999999854
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.5e-39 Score=240.64 Aligned_cols=247 Identities=15% Similarity=0.160 Sum_probs=167.6
Q ss_pred eeEEEEe--CCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVV--GTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~--g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|... ++++++|||+||++++...|..+++.| ++|+|+++|+||||.|+.+ ...+ +++++++++.++++.+
T Consensus 13 ~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~---~~~~-~~~~~~~~~~~~i~~l 88 (276)
T TIGR02240 13 SIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTP---RHPY-RFPGLAKLAARMLDYL 88 (276)
T ss_pred EEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCC---CCcC-cHHHHHHHHHHHHHHh
Confidence 5777664 335579999999999999999999999 9999999999999999754 2345 4999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhh--hhhhhhcccccC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANY--EAWAYGYAPLAV 161 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 161 (264)
+.++++|+||||||.+++.+|.++|++|+++|+++++............ ............... ......+.. ..
T Consensus 89 ~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 165 (276)
T TIGR02240 89 DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKV--LMMMASPRRYIQPSHGIHIAPDIYGG-AF 165 (276)
T ss_pred CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhH--HHHhcCchhhhccccccchhhhhccc-ee
Confidence 9999999999999999999999999999999999987542111110000 000000000000000 000000000 00
Q ss_pred CCCChHHHHHHHHhhcccCch-hhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec
Q 024681 162 GADVPAAVREFSRTLFNMRPD-ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (264)
.. .................. ...... .....+....+.++++|+++|+|++|.++|++..+++.+.+++ +++++++
T Consensus 166 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-~~~~~i~ 242 (276)
T TIGR02240 166 RR-DPELAMAHASKVRSGGKLGYYWQLF-AGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-AELHIID 242 (276)
T ss_pred ec-cchhhhhhhhhcccCCCchHHHHHH-HHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC-CEEEEEc
Confidence 00 111111111111111100 011111 1112222355788999999999999999999999999999998 8999998
Q ss_pred CCCCcccccChhcHHHHHHHHhcC
Q 024681 241 IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+||+++.|+|+++++.|.+|+++
T Consensus 243 -~gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 243 -DGHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred -CCCchhhccHHHHHHHHHHHHHH
Confidence 59999999999999999999863
No 4
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=8.5e-38 Score=239.42 Aligned_cols=252 Identities=17% Similarity=0.207 Sum_probs=167.3
Q ss_pred eeEEEEeCCC-----CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 7 ALHVRVVGTG-----DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 7 ~~~~~~~g~~-----~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
+++|.+.|++ .|+|||+||++++...|..++..| ++|+|+++|+||||.|+.+. ...|+ ++++++++.+++
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~--~~~~~-~~~~a~~l~~~l 149 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPP--GFSYT-METWAELILDFL 149 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCC--Ccccc-HHHHHHHHHHHH
Confidence 7889988865 479999999999999999999999 99999999999999997642 13454 999999999999
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHH-hCCCccceeEEecCCCCCCCCCCCCCCccHH--HHHHHHHHH------H----h
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASI-RRPDLFTKLILIGASPRFLNDEDYHGGFEEA--EIDKVFRAM------E----A 147 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~----~ 147 (264)
+.++.++++|+||||||.+++.++. .+|++|+++|++++................. ........+ . .
T Consensus 150 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (360)
T PLN02679 150 EEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFN 229 (360)
T ss_pred HHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHH
Confidence 9999999999999999999999887 4799999999999864322111000000000 000000000 0 0
Q ss_pred h--hhhhhhhcccccCCC---CChHHHHHHHHhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcc
Q 024681 148 N--YEAWAYGYAPLAVGA---DVPAAVREFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVP 219 (264)
Q Consensus 148 ~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 219 (264)
. .......+....+.. ..+...+.+..... .......+.... ...+....+.++++|+|+|+|++|.++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p 307 (360)
T PLN02679 230 RVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPAD--DEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTP 307 (360)
T ss_pred HhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhcc--CCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcC
Confidence 0 000000000000000 01112211111111 111111111111 1223345678899999999999999998
Q ss_pred hhh-----HHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 220 VSV-----AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 220 ~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+. .+.+.+.+++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 308 ~~~~~~~~~~~l~~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 308 LDGPVGKYFSSLPSQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred chhhHHHHHHhhhccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 763 3456677888 8999999999999999999999999999964
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=8.5e-38 Score=234.72 Aligned_cols=247 Identities=18% Similarity=0.273 Sum_probs=165.7
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
+++|...|++ |+|||+||++++...|+.+++.| +.++|+++|+||||.|+.+. ..|+ ++++++|+.+++++++.
T Consensus 18 ~i~y~~~G~g-~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~---~~~~-~~~~a~dl~~ll~~l~~ 92 (295)
T PRK03592 18 RMAYIETGEG-DPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPD---IDYT-FADHARYLDAWFDALGL 92 (295)
T ss_pred EEEEEEeCCC-CEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCC---CCCC-HHHHHHHHHHHHHHhCC
Confidence 5889999965 69999999999999999999999 77899999999999997652 3464 99999999999999999
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhh---------hhhhhhc
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANY---------EAWAYGY 156 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 156 (264)
++++++||||||.+|+.+|.++|++|+++|++++.......... .. ........+.... ......+
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDF----PP-AVRELFQALRSPGEGEEMVLEENVFIERV 167 (295)
T ss_pred CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhc----ch-hHHHHHHHHhCcccccccccchhhHHhhc
Confidence 99999999999999999999999999999999984321110000 00 0111111111000 0001111
Q ss_pred ccccC-CCCChHHHHHHHHhhcccCc-hhhhhhhhhh-----------cCCccccccCCcccCEEEEecCCCCCcchhhH
Q 024681 157 APLAV-GADVPAAVREFSRTLFNMRP-DISLFVSKTV-----------FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA 223 (264)
Q Consensus 157 ~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 223 (264)
..... ....++....+...+..... .....+.... ...+....+.++++|+|+|+|++|.++++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 247 (295)
T PRK03592 168 LPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAI 247 (295)
T ss_pred ccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHH
Confidence 11111 11111122222211111000 0000000000 01122345678899999999999999955444
Q ss_pred HH-HHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 224 EY-LQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 224 ~~-~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+ +.+..++ +++++++++||+++.|+|+++++.|.+|+++
T Consensus 248 ~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~ 288 (295)
T PRK03592 248 RDWCRSWPNQ-LEITVFGAGLHFAQEDSPEEIGAAIAAWLRR 288 (295)
T ss_pred HHHHHHhhhh-cceeeccCcchhhhhcCHHHHHHHHHHHHHH
Confidence 44 4556677 8999999999999999999999999999863
No 6
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2e-37 Score=233.30 Aligned_cols=246 Identities=15% Similarity=0.132 Sum_probs=164.5
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|.+.|+ .+|+|||+||++++...|..+++.| .||+|+++|+||||.|+++.. ...|+ ++++++|+.+++++
T Consensus 34 ~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~-~~~~~-~~~~a~~l~~~l~~ 111 (302)
T PRK00870 34 LRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTR-REDYT-YARHVEWMRSWFEQ 111 (302)
T ss_pred EEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCC-cccCC-HHHHHHHHHHHHHH
Confidence 4689999886 3579999999999999999999999 589999999999999975421 23454 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh----hhhhhhhhccc
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA----NYEAWAYGYAP 158 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 158 (264)
++.++++++||||||.+++.+|.++|++|+++|++++.......... ............ ....+...
T Consensus 112 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--- 182 (302)
T PRK00870 112 LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMP------DAFWAWRAFSQYSPVLPVGRLVNG--- 182 (302)
T ss_pred cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccch------HHHhhhhcccccCchhhHHHHhhc---
Confidence 99999999999999999999999999999999999874221110000 000000000000 00000000
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhh-----------cCCccccccCCcccCEEEEecCCCCCcchhhHHHHH
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTV-----------FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 227 (264)
........+....+................... ........+.++++|+++|+|++|.++|... +.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~ 261 (302)
T PRK00870 183 GTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQ 261 (302)
T ss_pred cccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHH
Confidence 000000011111110000000000000000000 0011224467899999999999999999766 8899
Q ss_pred HHcCCCce---EEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 228 RHLGGRNT---VELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 228 ~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+.+++ .+ +.+++++||+++.|+|+++.+.|.+||++
T Consensus 262 ~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 262 KRIPG-AAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred hhccc-ccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 99987 55 78999999999999999999999999964
No 7
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=2.6e-37 Score=227.27 Aligned_cols=247 Identities=26% Similarity=0.428 Sum_probs=173.3
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
+++|...|+ ++|+||++||++.+...|..+++.| ++|+|+++|+||||.|+.. ...+ +++++++++.++++.+
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~---~~~~-~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAP---EGPY-SIEDLADDVLALLDHL 76 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCC---CCCC-CHHHHHHHHHHHHHHh
Confidence 367888886 4689999999999999999999999 9999999999999999653 2344 4999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHH-HHHhhhhhhhhhcccccCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFR-AMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (264)
+.++++++|||+||.+++.+|.++|++++++|++++.........+... ...... ............+......
T Consensus 77 ~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (251)
T TIGR02427 77 GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNAR-----IAAVRAEGLAALADAVLERWFTPGFR 151 (251)
T ss_pred CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHH-----HhhhhhccHHHHHHHHHHHHcccccc
Confidence 9899999999999999999999999999999999875432211111000 000000 0000000000111111111
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCC
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (264)
.........+......................+....+.++++|+++++|++|.++|.+..+.+.+.+++ .+++.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~ 230 (251)
T TIGR02427 152 EAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG-ARFAEIRGA 230 (251)
T ss_pred cCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC-ceEEEECCC
Confidence 1111122222222222222222222222333445566778899999999999999999999999999998 899999999
Q ss_pred CCcccccChhcHHHHHHHHhc
Q 024681 243 GHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 243 gH~~~~~~~~~~~~~i~~fl~ 263 (264)
||+++.++|+++.+.+.+|++
T Consensus 231 gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 231 GHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCcccccChHHHHHHHHHHhC
Confidence 999999999999999999984
No 8
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=5.5e-37 Score=224.80 Aligned_cols=239 Identities=20% Similarity=0.315 Sum_probs=163.6
Q ss_pred CCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEe
Q 024681 14 GTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVG 92 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 92 (264)
|+++|+|||+||++++...|..+++.| ++|+|+++|+||+|.|... ..+ +++++++++.+.++ ++++++|
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~----~~~-~~~~~~~~~~~~~~----~~~~lvG 71 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGF----GPL-SLADAAEAIAAQAP----DPAIWLG 71 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCC----CCc-CHHHHHHHHHHhCC----CCeEEEE
Confidence 456679999999999999999999999 9999999999999998653 223 47888877765442 6999999
Q ss_pred cChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc-ccCC-CCChHHHH
Q 024681 93 HSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP-LAVG-ADVPAAVR 170 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~ 170 (264)
|||||.+++.+|.++|++++++|++++.+.......+...........+..............+.. .... ........
T Consensus 72 ~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (245)
T TIGR01738 72 WSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDAR 151 (245)
T ss_pred EcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHH
Confidence 999999999999999999999999998765433332322222222222211111111111111100 0001 11111111
Q ss_pred HHHHhhccc-Cc--hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccc
Q 024681 171 EFSRTLFNM-RP--DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247 (264)
Q Consensus 171 ~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 247 (264)
.+...+... .+ .............+....+.++++|+++++|++|.++|.+..+.+.+.+++ +++.+++++||+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 230 (245)
T TIGR01738 152 ALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH-SELYIFAKAAHAPF 230 (245)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC-CeEEEeCCCCCCcc
Confidence 121211111 11 122222233334455566788999999999999999999999999999998 89999999999999
Q ss_pred ccChhcHHHHHHHHh
Q 024681 248 LSAPAIVGPVIRRAL 262 (264)
Q Consensus 248 ~~~~~~~~~~i~~fl 262 (264)
+|+|+++++.|.+|+
T Consensus 231 ~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 231 LSHAEAFCALLVAFK 245 (245)
T ss_pred ccCHHHHHHHHHhhC
Confidence 999999999999986
No 9
>PLN02578 hydrolase
Probab=100.00 E-value=2.3e-36 Score=231.38 Aligned_cols=248 Identities=19% Similarity=0.288 Sum_probs=170.1
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
.++|...|++ |+||++||++++...|..+++.| ++|+|+++|+||||.|+.+ ...|+ .+.+++++.++++.+..
T Consensus 77 ~i~Y~~~g~g-~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~---~~~~~-~~~~a~~l~~~i~~~~~ 151 (354)
T PLN02578 77 KIHYVVQGEG-LPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKA---LIEYD-AMVWRDQVADFVKEVVK 151 (354)
T ss_pred EEEEEEcCCC-CeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCc---ccccC-HHHHHHHHHHHHHHhcc
Confidence 5788888866 68999999999999999999999 9999999999999999864 34565 88999999999999988
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCC-------ccHH----HHHHHHHHHHhhh-----
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG-------FEEA----EIDKVFRAMEANY----- 149 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-------~~~~----~~~~~~~~~~~~~----- 149 (264)
++++++|||+||.+++.+|.++|++|+++|++++.+.+......... .... .............
T Consensus 152 ~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T PLN02578 152 EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQA 231 (354)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999986544322111000 0000 0000000000000
Q ss_pred --hhhhhhcccccCCCC--ChH-HHHHHHHhhcccCchhh---hhhhhhh----cCCccccccCCcccCEEEEecCCCCC
Q 024681 150 --EAWAYGYAPLAVGAD--VPA-AVREFSRTLFNMRPDIS---LFVSKTV----FDTDLRGILGLVRVPCVIIQTSKDVS 217 (264)
Q Consensus 150 --~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~ 217 (264)
...........+... ..+ ..+.... ...++... ....... ...+..+.++++++|+++|+|++|.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~ 309 (354)
T PLN02578 232 KQPSRIESVLKSVYKDKSNVDDYLVESITE--PAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPW 309 (354)
T ss_pred cCHHHHHHHHHHhcCCcccCCHHHHHHHHh--cccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCC
Confidence 000000000000000 001 1111111 01111111 1111111 12334556788999999999999999
Q ss_pred cchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 218 VPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+|.+..+.+.+.+++ .+++++ ++||+++.|+|+++++.|.+|++
T Consensus 310 v~~~~~~~l~~~~p~-a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 310 VGPAKAEKIKAFYPD-TTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCHHHHHHHHHhCCC-CEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999998 788888 49999999999999999999986
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=4.5e-37 Score=226.92 Aligned_cols=246 Identities=22% Similarity=0.362 Sum_probs=169.1
Q ss_pred eEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 8 LHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 8 ~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
++|...|+ ++|+||++||++++...|..+++.| ++|+|+++|+||||.|.... ...++ ++++++++.++++.+
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~-~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGEL--PPGYS-IAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCC--cccCC-HHHHHHHHHHHHHHh
Confidence 46777774 5689999999999999999999999 99999999999999997532 24454 999999999999999
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh-hhhhhhh-----cc
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN-YEAWAYG-----YA 157 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~ 157 (264)
+.++++++||||||.+++.+|.++|++++++|++++........ ..........+... ...+... +.
T Consensus 78 ~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (257)
T TIGR03611 78 NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHT-------RRCFDVRIALLQHAGPEAYVHAQALFLYP 150 (257)
T ss_pred CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhH-------HHHHHHHHHHHhccCcchhhhhhhhhhcc
Confidence 99999999999999999999999999999999998753321100 00000000000000 0000000 00
Q ss_pred cccCCCCChHHHHHHHHhhccc-CchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 158 PLAVGADVPAAVREFSRTLFNM-RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
...................... ...............+....+.++++|+++++|++|.++|++.++.+.+.+++ .++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~ 229 (257)
T TIGR03611 151 ADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPN-AQL 229 (257)
T ss_pred ccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCC-ceE
Confidence 0000000000000000000000 11111111122233445566788899999999999999999999999999998 899
Q ss_pred EEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+.++++||+++.++|+++.+.|.+||++
T Consensus 230 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 230 KLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999974
No 11
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2.1e-36 Score=226.17 Aligned_cols=247 Identities=15% Similarity=0.196 Sum_probs=163.5
Q ss_pred eeeEEEEeCCCCceEEEecCCCCChhhHHHh---hhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFGTDQSAWQRI---LPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~---~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
..++|...|++ |+||++||++.+...|..+ +..+ .+|+|+++|+||||.|+....+ ... ....++++.+++
T Consensus 20 ~~~~y~~~g~~-~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~~~-~~~~~~~l~~~l 95 (282)
T TIGR03343 20 FRIHYNEAGNG-EAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD--EQR-GLVNARAVKGLM 95 (282)
T ss_pred eeEEEEecCCC-CeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc--ccc-cchhHHHHHHHH
Confidence 46889988865 6899999999888777643 3344 7899999999999999754211 111 225688999999
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHH----hhhhhhhhhc
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAME----ANYEAWAYGY 156 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 156 (264)
+.++.++++++||||||.+++.+|.++|++++++|++++...... .................. .....+...
T Consensus 96 ~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (282)
T TIGR03343 96 DALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPS---LFAPMPMEGIKLLFKLYAEPSYETLKQMLNV- 171 (282)
T ss_pred HHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcc---ccccCchHHHHHHHHHhcCCCHHHHHHHHhh-
Confidence 999999999999999999999999999999999999997532111 000011111111111110 001111100
Q ss_pred ccccCCC--CChHHHHHHHHhhcccCchhhhhhhh-----hhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHH
Q 024681 157 APLAVGA--DVPAAVREFSRTLFNMRPDISLFVSK-----TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRH 229 (264)
Q Consensus 157 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 229 (264)
..... ......+........ .+........ .....+....++++++|+++++|++|.+++++.++++++.
T Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~ 248 (282)
T TIGR03343 172 --FLFDQSLITEELLQGRWENIQR-QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWN 248 (282)
T ss_pred --CccCcccCcHHHHHhHHHHhhc-CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHh
Confidence 00000 011111111111111 1111111110 0112233456788999999999999999999999999999
Q ss_pred cCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 230 LGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 230 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++ +++++++++||+++.|+|+++.+.|.+||+.
T Consensus 249 ~~~-~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 249 MPD-AQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred CCC-CEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 999 8999999999999999999999999999963
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.2e-36 Score=226.50 Aligned_cols=244 Identities=17% Similarity=0.193 Sum_probs=160.9
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
+++|...|++ |+|||+||++.+...|..+.+.| ++|+|+++|+||||.|+.+. ...|+ ++++++++.+++++++.
T Consensus 25 ~i~y~~~G~~-~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~-~~~~~~~~~~~~~~~~~ 100 (286)
T PRK03204 25 RIHYIDEGTG-PPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPS--GFGYQ-IDEHARVIGEFVDHLGL 100 (286)
T ss_pred EEEEEECCCC-CEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCC--ccccC-HHHHHHHHHHHHHHhCC
Confidence 5788888875 68999999999999999999999 89999999999999997542 12354 89999999999999999
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHH--Hh---hhhhhhhhccccc
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAM--EA---NYEAWAYGYAPLA 160 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~ 160 (264)
++++++||||||.+++.++..+|++|+++|++++.... . . ......+....... .. ....+...+....
T Consensus 101 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~-~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (286)
T PRK03204 101 DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWP-A-D----TLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAG 174 (286)
T ss_pred CCEEEEEECccHHHHHHHHHhChhheeEEEEECccccC-C-C----chhHHHHHHHhccccchhhhhhhhHHHHHhcccc
Confidence 99999999999999999999999999999998764211 0 0 00000000000000 00 0000111111110
Q ss_pred C-CCCChHHHHHHHHhhcccCchhhhhhh---hhhc--C---CccccccC--CcccCEEEEecCCCCCcchh-hHHHHHH
Q 024681 161 V-GADVPAAVREFSRTLFNMRPDISLFVS---KTVF--D---TDLRGILG--LVRVPCVIIQTSKDVSVPVS-VAEYLQR 228 (264)
Q Consensus 161 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~---~~~~~~~~--~i~~P~l~i~g~~D~~~~~~-~~~~~~~ 228 (264)
. ..........+.. .. ..+....... .... . .+....+. .+++|+++|+|++|.++++. ..+.+.+
T Consensus 175 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~ 252 (286)
T PRK03204 175 TEHRPSSAVMAHYRA-VQ-PNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRA 252 (286)
T ss_pred ccCCCCHHHHHHhcC-CC-CCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHH
Confidence 1 1111111111111 00 0000000000 0000 0 00001111 12899999999999988654 5788999
Q ss_pred HcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 229 HLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 229 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+++ .++++++++||++++|+|+++++.|.+||.
T Consensus 253 ~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 253 TFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred hcCC-CeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 9999 899999999999999999999999999984
No 13
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=4.9e-36 Score=214.78 Aligned_cols=257 Identities=20% Similarity=0.255 Sum_probs=172.5
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|.+.|+ +.|.|+++||++....+|+.....| .||+|+++|+||+|.|+.+. ....|+ +..++.|+..+++.
T Consensus 32 I~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~-~~~~Yt-~~~l~~di~~lld~ 109 (322)
T KOG4178|consen 32 IRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPP-HISEYT-IDELVGDIVALLDH 109 (322)
T ss_pred EEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCC-Ccceee-HHHHHHHHHHHHHH
Confidence 4677888886 5689999999999999999999999 77999999999999998753 236776 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC------------CCCCccHHHH-HHHHHH--HHh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED------------YHGGFEEAEI-DKVFRA--MEA 147 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~------------~~~~~~~~~~-~~~~~~--~~~ 147 (264)
++.++++++||+||+.+|+.+|..+|++|+++|+++.+........ +...+..... +..+.. ...
T Consensus 110 Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~ 189 (322)
T KOG4178|consen 110 LGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEM 189 (322)
T ss_pred hccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHH
Confidence 9999999999999999999999999999999999998654111000 0000000000 000000 000
Q ss_pred hhhhhhh-hcc-cccCC---CC-----ChHHHHHHHHhhcccCchhhhhhhhhhcCC--ccccccCCcccCEEEEecCCC
Q 024681 148 NYEAWAY-GYA-PLAVG---AD-----VPAAVREFSRTLFNMRPDISLFVSKTVFDT--DLRGILGLVRVPCVIIQTSKD 215 (264)
Q Consensus 148 ~~~~~~~-~~~-~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~P~l~i~g~~D 215 (264)
....+.. ... ..... .. ..+..+.+...+..-.-.......+.+.+. .....+.++++|+++|+|+.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D 269 (322)
T KOG4178|consen 190 LVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLD 269 (322)
T ss_pred hHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCc
Confidence 0000000 000 00000 00 111222222222211111111222222111 224456788999999999999
Q ss_pred CCcchh-hHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 216 VSVPVS-VAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 216 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.+.+.. ..+.+.+.+++..+.++++++||+++.|+|+++.+.+.+|+++
T Consensus 270 ~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 270 PVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred ccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 998865 5566667777745788999999999999999999999999864
No 14
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=2.2e-36 Score=222.29 Aligned_cols=232 Identities=20% Similarity=0.214 Sum_probs=155.2
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecCh
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHSV 95 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~ 95 (264)
.|||+||++.+...|..+++.| .+|+|+++|+||||.|+... ...| +++++++|+.++++.++. ++++++||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~--~~~~-~~~~~a~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDS--NTVS-SSDQYNRPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCc--cccC-CHHHHHHHHHHHHHhcCCCCCEEEEecCc
Confidence 6999999999999999999999 78999999999999996431 1234 499999999999999987 4999999999
Q ss_pred hHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh-HHHHHHH-
Q 024681 96 SAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP-AAVREFS- 173 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 173 (264)
||.+++.+|.++|++|+++|++++....... ............ ....+...+.......... .......
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKPGS------IISPRLKNVMEG---TEKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCCCC------CccHHHHhhhhc---cccceeeeeccCCCCCcchhhcCHHHHH
Confidence 9999999999999999999999985321100 000000000000 0000000000000000000 0000000
Q ss_pred HhhcccCc-hhhhhhhhhh---------cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCC
Q 024681 174 RTLFNMRP-DISLFVSKTV---------FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243 (264)
Q Consensus 174 ~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 243 (264)
.......+ .......... ...+....+..+++|+++++|++|..+|+...+.+.+.+++ +++++++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~-a~~~~i~~~G 231 (255)
T PLN02965 153 HYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP-AQTYVLEDSD 231 (255)
T ss_pred HHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc-ceEEEecCCC
Confidence 00000000 0000000000 00112224456899999999999999999999999999999 8999999999
Q ss_pred CcccccChhcHHHHHHHHhc
Q 024681 244 HLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 244 H~~~~~~~~~~~~~i~~fl~ 263 (264)
|+++.|+|++|++.|.+|++
T Consensus 232 H~~~~e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 232 HSAFFSVPTTLFQYLLQAVS 251 (255)
T ss_pred CchhhcCHHHHHHHHHHHHH
Confidence 99999999999999999986
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=4.7e-36 Score=221.13 Aligned_cols=234 Identities=18% Similarity=0.192 Sum_probs=160.2
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 94 (264)
++|+|||+||++++...|..++..| ++|+|+++|+||||.|... ..+ +++++++|+.++++.++.++++++|||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~----~~~-~~~~~~~d~~~~l~~l~~~~~~lvGhS 89 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRD----PVM-NYPAMAQDLLDTLDALQIEKATFIGHS 89 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCC----CCC-CHHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 4579999999999999999999999 9999999999999999753 335 499999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhh---hhhhhcccccCCCCChHHHH
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYE---AWAYGYAPLAVGADVPAAVR 170 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~ 170 (264)
|||.+++.+|.++|++|+++|++++.+...... ........ ...... ... .....+... . .......
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~ 160 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR-----RHDEIFAA-INAVSEAGATTRQQAAAIMRQH-L--NEEGVIQ 160 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccch-----hhHHHHHH-HHHhhhcccccHHHHHHHHHHh-c--CCHHHHH
Confidence 999999999999999999999998654321100 00000000 000000 000 000000000 0 0000111
Q ss_pred HHHHhhcccCch-hhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccccc
Q 024681 171 EFSRTLFNMRPD-ISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS 249 (264)
Q Consensus 171 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 249 (264)
.....+...... .................++++++|+|+|+|++|..++.+..+.+.+.+++ +++.+++++||+++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~ 239 (255)
T PRK10673 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ-ARAHVIAGAGHWVHAE 239 (255)
T ss_pred HHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC-cEEEEeCCCCCeeecc
Confidence 111111000000 00000000111111234667899999999999999999999999999999 8999999999999999
Q ss_pred ChhcHHHHHHHHhcC
Q 024681 250 APAIVGPVIRRALSR 264 (264)
Q Consensus 250 ~~~~~~~~i~~fl~~ 264 (264)
+|+++.+.|.+||++
T Consensus 240 ~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 240 KPDAVLRAIRRYLND 254 (255)
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999999974
No 16
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=6.2e-36 Score=223.34 Aligned_cols=252 Identities=20% Similarity=0.215 Sum_probs=167.5
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.++|.+.|+ +.|+|||+||++++...|..+.+.| ++|+|+++|+||||.|+.+. ...+ +++++++|+.++++.++
T Consensus 17 ~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~-~~~~~~~~l~~~i~~~~ 93 (278)
T TIGR03056 17 HWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPF--RFRF-TLPSMAEDLSALCAAEG 93 (278)
T ss_pred EEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCcc--ccCC-CHHHHHHHHHHHHHHcC
Confidence 577888886 3589999999999999999999999 89999999999999997542 1245 49999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC-CCCCccHHHH------HHHHHHHHhhhhhhhhhcc
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED-YHGGFEEAEI------DKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 157 (264)
.++++++||||||.+++.+|.++|++++++|++++......... .......... .............+.....
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIR 173 (278)
T ss_pred CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhh
Confidence 89999999999999999999999999999999988543211000 0000000000 0000000000000000000
Q ss_pred cccCCCCChHHHHHHHHhhcccC-chhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE
Q 024681 158 PLAVGADVPAAVREFSRTLFNMR-PDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV 236 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 236 (264)
. ............+........ ...................++++++|+++|+|++|.++|.+..+.+.+.+++ +++
T Consensus 174 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~-~~~ 251 (278)
T TIGR03056 174 D-TGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPT-ATL 251 (278)
T ss_pred c-cccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccC-CeE
Confidence 0 000000001111111000000 0000011111111122345678899999999999999999999999999998 899
Q ss_pred EEecCCCCcccccChhcHHHHHHHHhc
Q 024681 237 ELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 237 ~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.++++||+++.|.|+++++.|.+|++
T Consensus 252 ~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 252 HVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred EEECCCCCcccccCHHHHHHHHHHHhC
Confidence 999999999999999999999999985
No 17
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=227.45 Aligned_cols=250 Identities=17% Similarity=0.244 Sum_probs=162.8
Q ss_pred eeeEEEEeCCC--------CceEEEecCCCCChhhHH--Hhh--------hhc-CCceEEEecCCCCCCCCCCCCC----
Q 024681 6 EALHVRVVGTG--------DRILVLAHGFGTDQSAWQ--RIL--------PYL-NHHRVIMFDLVCAGSVNPDYFD---- 62 (264)
Q Consensus 6 ~~~~~~~~g~~--------~p~vv~~hG~~~~~~~~~--~~~--------~~l-~g~~v~~~d~~g~G~s~~~~~~---- 62 (264)
.+++|...|++ +|+|||+||++++...|. .+. ..+ ++|+|+++|+||||.|+.+...
T Consensus 50 ~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~ 129 (360)
T PRK06489 50 LRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAA 129 (360)
T ss_pred ceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCC
Confidence 46889988874 589999999999987775 332 234 7899999999999999753211
Q ss_pred CcccchHHHHHHHHHHH-HHHhCCCeEE-EEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHH
Q 024681 63 FRRYTTLDAYVDDLLNI-LDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDK 140 (264)
Q Consensus 63 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
...|+ ++++++++.++ ++++++++++ ++||||||.+|+.+|.++|++|+++|++++.+........ ... ..
T Consensus 130 ~~~~~-~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~---~~~---~~ 202 (360)
T PRK06489 130 FPRYD-YDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNW---MWR---RM 202 (360)
T ss_pred CCccc-HHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHH---HHH---HH
Confidence 11355 89999998885 4889999985 8999999999999999999999999999875421110000 000 00
Q ss_pred HHHHHHhh--------------hhhhhhh-----------cccccCCCC-ChHHHHHHHHhhcccCchhhhhhhhhhcCC
Q 024681 141 VFRAMEAN--------------YEAWAYG-----------YAPLAVGAD-VPAAVREFSRTLFNMRPDISLFVSKTVFDT 194 (264)
Q Consensus 141 ~~~~~~~~--------------~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (264)
........ ....... +........ .....+........................
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (360)
T PRK06489 203 LIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDY 282 (360)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhcc
Confidence 00000000 0000000 000000000 000111111111111122221222222334
Q ss_pred ccccccCCcccCEEEEecCCCCCcchhhH--HHHHHHcCCCceEEEecCC----CCcccccChhcHHHHHHHHhcC
Q 024681 195 DLRGILGLVRVPCVIIQTSKDVSVPVSVA--EYLQRHLGGRNTVELLKIE----GHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 195 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+..+.+.+|++|+|+|+|++|.++|++.. +.+.+.+++ .++++++++ ||.++ ++|+++++.|.+||++
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHh
Confidence 55677889999999999999999998875 789999999 899999986 99997 8999999999999963
No 18
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=6.2e-35 Score=222.51 Aligned_cols=250 Identities=18% Similarity=0.196 Sum_probs=166.6
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCC-CcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFD-FRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|.+.|+ ++|+|||+||++.+...|+.+++.| ++|+|+++|+||||.|+.+... ...|+ ++++++++.+++++
T Consensus 115 ~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys-~~~~a~~l~~~i~~ 193 (383)
T PLN03084 115 FRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYT-LDEYVSSLESLIDE 193 (383)
T ss_pred eEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCC-HHHHHHHHHHHHHH
Confidence 3678888886 4689999999999999999999999 9999999999999999764221 12465 99999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-----h-hhhhhhhc
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-----N-YEAWAYGY 156 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~ 156 (264)
++.++++|+|||+||.+++.+|.++|++|+++|+++++...... . .. ..+..+...... . .......+
T Consensus 194 l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~-~----~p-~~l~~~~~~l~~~~~~~~~~~~~~~~~ 267 (383)
T PLN03084 194 LKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHA-K----LP-STLSEFSNFLLGEIFSQDPLRASDKAL 267 (383)
T ss_pred hCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccc-c----ch-HHHHHHHHHHhhhhhhcchHHHHhhhh
Confidence 99999999999999999999999999999999999986322110 0 00 011111000000 0 00000000
Q ss_pred ccccCCCCChHHHHHHHHhhcccCc--hhhhhhhhhhcC------Cccccc--cCCcccCEEEEecCCCCCcchhhHHHH
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRP--DISLFVSKTVFD------TDLRGI--LGLVRVPCVIIQTSKDVSVPVSVAEYL 226 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~--~~~i~~P~l~i~g~~D~~~~~~~~~~~ 226 (264)
..........+....+...+..... .........+.. .+.... ..++++|+++++|++|.+++.+..+.+
T Consensus 268 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~ 347 (383)
T PLN03084 268 TSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDF 347 (383)
T ss_pred cccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHH
Confidence 0000000011111111111111100 001111111100 001111 135799999999999999999988888
Q ss_pred HHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 227 QRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 227 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
++.. + .++++++++||+++.|+|+++++.|.+||++
T Consensus 348 a~~~-~-a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 348 CKSS-Q-HKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHhc-C-CeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 8874 5 7999999999999999999999999999974
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=1e-35 Score=217.65 Aligned_cols=234 Identities=16% Similarity=0.134 Sum_probs=150.8
Q ss_pred CceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
+|+|||+||++++...|..+++.|++|+|+++|+||||.|+.+. .. +++++++|+.++++.++.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~~~~vi~~D~~G~G~S~~~~----~~-~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALPDYPRLYIDLPGHGGSAAIS----VD-GFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcCCCCEEEecCCCCCCCCCcc----cc-CHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 57899999999999999999998866999999999999997642 22 59999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCc-cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhhhhhhc-ccccCCCCChHHHHHHH
Q 024681 97 AMIGLLASIRRPDL-FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEAWAYGY-APLAVGADVPAAVREFS 173 (264)
Q Consensus 97 g~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 173 (264)
|.+|+.+|.++|+. |++++++++.+.......... ...........+.. ........+ ...............+.
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQA--RWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLV 154 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHH--HHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHH
Confidence 99999999999764 999999987543221100000 00000000000000 000111000 00001111111111111
Q ss_pred HhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccC
Q 024681 174 RTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA 250 (264)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 250 (264)
.................. ...+..+.+.++++|+++++|++|..+. .+.+. .+ +++++++++||+++.|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~-~~~~~i~~~gH~~~~e~ 227 (242)
T PRK11126 155 AKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LA-LPLHVIPNAGHNAHREN 227 (242)
T ss_pred HhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hc-CeEEEeCCCCCchhhhC
Confidence 111111111111111111 1234456778899999999999998652 23333 25 79999999999999999
Q ss_pred hhcHHHHHHHHhcC
Q 024681 251 PAIVGPVIRRALSR 264 (264)
Q Consensus 251 ~~~~~~~i~~fl~~ 264 (264)
|+++++.|.+|++.
T Consensus 228 p~~~~~~i~~fl~~ 241 (242)
T PRK11126 228 PAAFAASLAQILRL 241 (242)
T ss_pred hHHHHHHHHHHHhh
Confidence 99999999999863
No 20
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=4.2e-35 Score=227.50 Aligned_cols=252 Identities=16% Similarity=0.228 Sum_probs=161.2
Q ss_pred eeeEEEEeCCC----CceEEEecCCCCChhhHHH-hhhhc-----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 6 EALHVRVVGTG----DRILVLAHGFGTDQSAWQR-ILPYL-----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 6 ~~~~~~~~g~~----~p~vv~~hG~~~~~~~~~~-~~~~l-----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
..++|...|+. +|+|||+||++++...|.. +++.| ++|+|+++|+||||.|+.+. ...|+ +++++++
T Consensus 186 ~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~--~~~yt-l~~~a~~ 262 (481)
T PLN03087 186 ESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA--DSLYT-LREHLEM 262 (481)
T ss_pred eEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC--CCcCC-HHHHHHH
Confidence 36888888862 4799999999999999975 33433 59999999999999997542 23454 9999999
Q ss_pred HH-HHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHH-H------HHHh
Q 024681 76 LL-NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVF-R------AMEA 147 (264)
Q Consensus 76 ~~-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~ 147 (264)
+. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++.......... ......... . ....
T Consensus 263 l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 339 (481)
T PLN03087 263 IERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQA---TQYVMRKVAPRRVWPPIAFGA 339 (481)
T ss_pred HHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhH---HHHHHHHhcccccCCccccch
Confidence 94 89999999999999999999999999999999999999999753321111000 000000000 0 0000
Q ss_pred hhhhhhhhcccccC--CCCChHHHHH-------------HHHhhcccCchhh-hh---hhhhh---cCCccccccCCccc
Q 024681 148 NYEAWAYGYAPLAV--GADVPAAVRE-------------FSRTLFNMRPDIS-LF---VSKTV---FDTDLRGILGLVRV 205 (264)
Q Consensus 148 ~~~~~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~~~~~-~~---~~~~~---~~~~~~~~~~~i~~ 205 (264)
....|......... .......... ............. .. ..... ..........++++
T Consensus 340 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~v 419 (481)
T PLN03087 340 SVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKC 419 (481)
T ss_pred hHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCC
Confidence 00001000000000 0000000000 0000000000000 00 00000 00111222346899
Q ss_pred CEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc-cChhcHHHHHHHHhcC
Q 024681 206 PCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL-SAPAIVGPVIRRALSR 264 (264)
Q Consensus 206 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 264 (264)
|+|+|+|++|.++|++..+.+++.+|+ +++++++++||+++. ++|+++++.|.+|+++
T Consensus 420 PtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 420 DVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred CEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 999999999999999999999999999 899999999999885 9999999999999863
No 21
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.9e-35 Score=225.36 Aligned_cols=246 Identities=15% Similarity=0.141 Sum_probs=159.1
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChh-hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHH
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQS-AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~-~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~ 79 (264)
+++|..+++ .+++|||+||++++.. .|..+++.| .||+|+++|+||||.|+... ....+++++++|+.++
T Consensus 73 ~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~---~~~~~~~~~~~dv~~~ 149 (349)
T PLN02385 73 EIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH---GYIPSFDDLVDDVIEH 149 (349)
T ss_pred EEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC---CCcCCHHHHHHHHHHH
Confidence 455656553 3578999999998865 468898888 69999999999999997531 1112589999999999
Q ss_pred HHHhCC------CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 80 LDTLGV------NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 80 ~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
++.+.. .+++|+||||||.+++.++.++|++++++|+++|........ . ...........+......+.
T Consensus 150 l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~--~---~~~~~~~~~~~~~~~~p~~~ 224 (349)
T PLN02385 150 YSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDV--V---PPPLVLQILILLANLLPKAK 224 (349)
T ss_pred HHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccc--c---CchHHHHHHHHHHHHCCCce
Confidence 988753 279999999999999999999999999999999864432111 0 01111111111111100000
Q ss_pred ----hhcccccCCCCChHHHHHHHHhh-cc-cCchhhhhhhhhhc-CCccccccCCcccCEEEEecCCCCCcchhhHHHH
Q 024681 154 ----YGYAPLAVGADVPAAVREFSRTL-FN-MRPDISLFVSKTVF-DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYL 226 (264)
Q Consensus 154 ----~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 226 (264)
..+....+... ......... .. ............+. ..+....+.++++|+|+|+|++|.++|++.++.+
T Consensus 225 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l 301 (349)
T PLN02385 225 LVPQKDLAELAFRDL---KKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFL 301 (349)
T ss_pred ecCCCccccccccCH---HHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHH
Confidence 00000000000 000010000 00 00011111111111 1233456778999999999999999999999999
Q ss_pred HHHcCC-CceEEEecCCCCcccccChhc----HHHHHHHHhc
Q 024681 227 QRHLGG-RNTVELLKIEGHLPHLSAPAI----VGPVIRRALS 263 (264)
Q Consensus 227 ~~~~~~-~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~ 263 (264)
++.++. .+++++++++||+++.++|++ +.+.|.+||+
T Consensus 302 ~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~ 343 (349)
T PLN02385 302 YEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLD 343 (349)
T ss_pred HHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHH
Confidence 998843 279999999999999999976 7888899986
No 22
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=3.2e-34 Score=219.09 Aligned_cols=258 Identities=17% Similarity=0.194 Sum_probs=160.2
Q ss_pred eeeEEEEeCC----CCceEEEecCCCCChhhHHHhh---hhc--CCceEEEecCCCCCCCCCCCCCCcccc----hHHHH
Q 024681 6 EALHVRVVGT----GDRILVLAHGFGTDQSAWQRIL---PYL--NHHRVIMFDLVCAGSVNPDYFDFRRYT----TLDAY 72 (264)
Q Consensus 6 ~~~~~~~~g~----~~p~vv~~hG~~~~~~~~~~~~---~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~----~~~~~ 72 (264)
.+++|...|+ ++|+||++||++++...|..++ +.| .+|+|+++|+||||.|+.+......|+ ....+
T Consensus 26 ~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 105 (339)
T PRK07581 26 ARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTI 105 (339)
T ss_pred ceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeH
Confidence 3688998886 2356777777777776676554 466 689999999999999975421111221 01224
Q ss_pred HHHHHH----HHHHhCCCe-EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC---------------CCCCCC
Q 024681 73 VDDLLN----ILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND---------------EDYHGG 132 (264)
Q Consensus 73 ~~~~~~----~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~---------------~~~~~~ 132 (264)
++|+.+ +++++++++ ++|+||||||.+|+.+|.++|++|+++|++++.+..... ..+...
T Consensus 106 ~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 185 (339)
T PRK07581 106 YDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGG 185 (339)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCC
Confidence 555544 778899999 479999999999999999999999999999876532110 000000
Q ss_pred c----cHHHHHHHHHHHHh--hhhhhhhhcccccCCCCC-hHHHHHHHHh-hcccCchhhhhhhhhhc----------CC
Q 024681 133 F----EEAEIDKVFRAMEA--NYEAWAYGYAPLAVGADV-PAAVREFSRT-LFNMRPDISLFVSKTVF----------DT 194 (264)
Q Consensus 133 ~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~~ 194 (264)
. .............. ....+............. .......... ....++........... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 265 (339)
T PRK07581 186 WYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGG 265 (339)
T ss_pred CCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCC
Confidence 0 00111111010000 000111100000000000 1111122111 12222222222211111 12
Q ss_pred ccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC-CCCcccccChhcHHHHHHHHhcC
Q 024681 195 DLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI-EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 195 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+....+.++++|+|+|+|++|..+|++..+.+.+.+++ ++++++++ +||+++.++++++...|.+||++
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 45567888999999999999999999999999999999 89999998 89999999999999999999864
No 23
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=3.7e-34 Score=205.82 Aligned_cols=254 Identities=16% Similarity=0.144 Sum_probs=165.7
Q ss_pred EEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCe
Q 024681 9 HVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNR 87 (264)
Q Consensus 9 ~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (264)
.......+++++|++||+|++...|-.-++.| +..+|+++|++|+|+|+.+.++.+.-.....+++-+++.....++++
T Consensus 82 ~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~K 161 (365)
T KOG4409|consen 82 TVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEK 161 (365)
T ss_pred eecccccCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcc
Confidence 33333346679999999999999999999999 99999999999999998877666555556788999999999999999
Q ss_pred EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC-CCCCCCccHHHHHHHHHHHH-------------hhhhhhh
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND-EDYHGGFEEAEIDKVFRAME-------------ANYEAWA 153 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 153 (264)
.+|+|||+||++|..+|.++|++|+.+||++|....... ...........+........ ..-....
T Consensus 162 milvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv 241 (365)
T KOG4409|consen 162 MILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLV 241 (365)
T ss_pred eeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHH
Confidence 999999999999999999999999999999996543322 11111111111111111111 0001111
Q ss_pred hhcccccCCCC----ChHHHHHHHHhhcccCchhhhhhhhhhcC-----CccccccCCc--ccCEEEEecCCCCCcchhh
Q 024681 154 YGYAPLAVGAD----VPAAVREFSRTLFNMRPDISLFVSKTVFD-----TDLRGILGLV--RVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 154 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~ 222 (264)
..+.+..+..- .++.+-++.-.....++.....+...+.. ..+.+.+..+ ++|+++|+|++|-+- ...
T Consensus 242 ~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD-~~~ 320 (365)
T KOG4409|consen 242 SRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMD-KNA 320 (365)
T ss_pred hhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCccccc-chh
Confidence 11111111111 11122333333333333333332222211 1222333444 499999999998654 444
Q ss_pred HHHHHHHcCC-CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 223 AEYLQRHLGG-RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 223 ~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
..++.+.+.. .++.+++|++||.+..++|+.|++.+.++++
T Consensus 321 g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~ 362 (365)
T KOG4409|consen 321 GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECD 362 (365)
T ss_pred HHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHh
Confidence 4444443332 2899999999999999999999999999886
No 24
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=8.7e-35 Score=222.05 Aligned_cols=244 Identities=20% Similarity=0.284 Sum_probs=158.3
Q ss_pred eeEEEEeCCCCceEEEecCCCCChh------------hHHHhhh---hc--CCceEEEecCCCCCCCCCCCCCCcccchH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQS------------AWQRILP---YL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTL 69 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~------------~~~~~~~---~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~ 69 (264)
+++|+..|++++++||+||++++.. .|..+.. .| ++|+|+++|+||||.|.. ..++ +
T Consensus 47 ~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~-----~~~~-~ 120 (343)
T PRK08775 47 RLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD-----VPID-T 120 (343)
T ss_pred eEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC-----CCCC-H
Confidence 5889999964445777766665554 6888886 56 699999999999998843 2344 7
Q ss_pred HHHHHHHHHHHHHhCCCeE-EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHH------
Q 024681 70 DAYVDDLLNILDTLGVNRC-AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVF------ 142 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~------ 142 (264)
+++++|+.+++++++++++ +++||||||.+|+.+|.++|++|+++|++++.+...... . .........
T Consensus 121 ~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~---~--~~~~~~~~~~~~~~~ 195 (343)
T PRK08775 121 ADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA---A--AWRALQRRAVALGQL 195 (343)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH---H--HHHHHHHHHHHcCCC
Confidence 8899999999999999764 799999999999999999999999999999864321000 0 000000000
Q ss_pred -----------HHH----HhhhhhhhhhcccccC--CCCChHHHHHHH-----HhhcccCchhhhhhhhhhcCCcccccc
Q 024681 143 -----------RAM----EANYEAWAYGYAPLAV--GADVPAAVREFS-----RTLFNMRPDISLFVSKTVFDTDLRGIL 200 (264)
Q Consensus 143 -----------~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (264)
... ......+...+..... ..........+. .......+............ ....+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l 273 (343)
T PRK08775 196 QCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL--HRVDP 273 (343)
T ss_pred CCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh--cCCCh
Confidence 000 0000001011110000 000000011111 11111122212222111110 12236
Q ss_pred CCcccCEEEEecCCCCCcchhhHHHHHHHc-CCCceEEEecC-CCCcccccChhcHHHHHHHHhcC
Q 024681 201 GLVRVPCVIIQTSKDVSVPVSVAEYLQRHL-GGRNTVELLKI-EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 201 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.++++|+|+++|++|.++|++..+++.+.+ ++ ++++++++ +||++++|+|++|++.|.+||++
T Consensus 274 ~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~-a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 274 EAIRVPTVVVAVEGDRLVPLADLVELAEGLGPR-GSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred hcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCC-CeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 789999999999999999999999999988 56 89999985 99999999999999999999963
No 25
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=4.1e-34 Score=217.12 Aligned_cols=251 Identities=14% Similarity=0.091 Sum_probs=162.8
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCC--CcccchHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFD--FRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~--~~~~~~~~~~~~~~~~~~ 80 (264)
.++|..+++ ++++||++||++++...|..++..| .||+|+++|+||||.|+....+ .....+++++++|+.+++
T Consensus 42 ~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~ 121 (330)
T PRK10749 42 PIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFW 121 (330)
T ss_pred EEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHH
Confidence 588888764 4579999999999999999999877 8999999999999999753211 111225899999999999
Q ss_pred HHh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh---
Q 024681 81 DTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA--- 153 (264)
Q Consensus 81 ~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 153 (264)
+.+ +..+++++||||||.+++.+|.++|++++++|+++|........ . ......+...... .....
T Consensus 122 ~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~--~----~~~~~~~~~~~~~-~~~~~~~~ 194 (330)
T PRK10749 122 QQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL--P----SWMARRILNWAEG-HPRIRDGY 194 (330)
T ss_pred HHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC--C----cHHHHHHHHHHHH-hcCCCCcC
Confidence 886 56799999999999999999999999999999998854321111 0 0011111111100 00000
Q ss_pred ----hhcccccC-C---CCChHHHHHHHHhhcccCch----hhhhhhhhhc--CCccccccCCcccCEEEEecCCCCCcc
Q 024681 154 ----YGYAPLAV-G---ADVPAAVREFSRTLFNMRPD----ISLFVSKTVF--DTDLRGILGLVRVPCVIIQTSKDVSVP 219 (264)
Q Consensus 154 ----~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~ 219 (264)
........ . ...........+.....+.. ....+..... .......+.++++|+|+|+|++|.+++
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~ 274 (330)
T PRK10749 195 AIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVD 274 (330)
T ss_pred CCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeC
Confidence 00000000 0 01111112222222211100 0111111110 112234567889999999999999999
Q ss_pred hhhHHHHHHHcCC------CceEEEecCCCCcccccCh---hcHHHHHHHHhcC
Q 024681 220 VSVAEYLQRHLGG------RNTVELLKIEGHLPHLSAP---AIVGPVIRRALSR 264 (264)
Q Consensus 220 ~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 264 (264)
++.++.+++.+++ .+++++++++||.++.|.+ +++.+.|.+||++
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 275 NRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred HHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 9999988887632 1589999999999998876 6788889999864
No 26
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=4.7e-34 Score=218.70 Aligned_cols=256 Identities=18% Similarity=0.287 Sum_probs=165.4
Q ss_pred eeeEEEEeCC----CCceEEEecCCCCChh-----------hHHHhh----hhc-CCceEEEecCCC--CCCCCCCCCC-
Q 024681 6 EALHVRVVGT----GDRILVLAHGFGTDQS-----------AWQRIL----PYL-NHHRVIMFDLVC--AGSVNPDYFD- 62 (264)
Q Consensus 6 ~~~~~~~~g~----~~p~vv~~hG~~~~~~-----------~~~~~~----~~l-~g~~v~~~d~~g--~G~s~~~~~~- 62 (264)
.+++|..+|+ ++|+||++||++++.. .|..++ ..+ ++|+|+++|+|| +|.|.+....
T Consensus 16 ~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~ 95 (351)
T TIGR01392 16 VRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINP 95 (351)
T ss_pred ceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCC
Confidence 3688999984 3579999999999763 478776 334 899999999999 5665432111
Q ss_pred --------CcccchHHHHHHHHHHHHHHhCCCe-EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC-CC---
Q 024681 63 --------FRRYTTLDAYVDDLLNILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE-DY--- 129 (264)
Q Consensus 63 --------~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~--- 129 (264)
...|+ ++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++.+...... .+
T Consensus 96 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (351)
T TIGR01392 96 GGRPYGSDFPLIT-IRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNEV 174 (351)
T ss_pred CCCcCCCCCCCCc-HHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHHH
Confidence 11354 9999999999999999998 9999999999999999999999999999999865432110 00
Q ss_pred -----------CCC-c-----cHHHHH--HHHHHH-HhhhhhhhhhcccccCCCC-C------hHHHHHHH-----Hhhc
Q 024681 130 -----------HGG-F-----EEAEID--KVFRAM-EANYEAWAYGYAPLAVGAD-V------PAAVREFS-----RTLF 177 (264)
Q Consensus 130 -----------~~~-~-----~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~-----~~~~ 177 (264)
... . ...... ...... ......+...+........ . ....+.+. ....
T Consensus 175 ~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
T TIGR01392 175 QRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVD 254 (351)
T ss_pred HHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHh
Confidence 000 0 000000 000000 0000111111111111000 0 00011111 1122
Q ss_pred ccCchhhhhhhhhhcC-------CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEE-----EecCCCCc
Q 024681 178 NMRPDISLFVSKTVFD-------TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE-----LLKIEGHL 245 (264)
Q Consensus 178 ~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH~ 245 (264)
..++.........+.. .+..+.+++|++|+|+|+|++|.++|++..+.+++.+++ .++. +++++||+
T Consensus 255 ~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-~~~~v~~~~i~~~~GH~ 333 (351)
T TIGR01392 255 RFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA-AGLRVTYVEIESPYGHD 333 (351)
T ss_pred hcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh-cCCceEEEEeCCCCCcc
Confidence 2222222222222211 234577889999999999999999999999999999998 5554 55789999
Q ss_pred ccccChhcHHHHHHHHhc
Q 024681 246 PHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 246 ~~~~~~~~~~~~i~~fl~ 263 (264)
+++++|+++++.|.+||+
T Consensus 334 ~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 334 AFLVETDQVEELIRGFLR 351 (351)
T ss_pred hhhcCHHHHHHHHHHHhC
Confidence 999999999999999985
No 27
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=8.1e-34 Score=218.83 Aligned_cols=256 Identities=18% Similarity=0.299 Sum_probs=166.0
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChhh-------------HHHhh----hhc-CCceEEEecCCCC-CCCC-CCCCC
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQSA-------------WQRIL----PYL-NHHRVIMFDLVCA-GSVN-PDYFD 62 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~~-------------~~~~~----~~l-~g~~v~~~d~~g~-G~s~-~~~~~ 62 (264)
+++|...|+ ++|+|||+||++++... |..++ ..+ ++|+|+++|++|+ |.|+ +....
T Consensus 34 ~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~ 113 (379)
T PRK00175 34 ELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSIN 113 (379)
T ss_pred eEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCC
Confidence 588999885 25899999999999874 67776 344 8999999999983 4443 22111
Q ss_pred C----------cccchHHHHHHHHHHHHHHhCCCe-EEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC-C-
Q 024681 63 F----------RRYTTLDAYVDDLLNILDTLGVNR-CAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED-Y- 129 (264)
Q Consensus 63 ~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-~- 129 (264)
+ ..|+ ++++++++.++++++++++ ++++||||||.+++.+|.++|++|+++|++++.+....... +
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 192 (379)
T PRK00175 114 PDTGKPYGSDFPVIT-IRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFN 192 (379)
T ss_pred CCCCCcccCCCCcCC-HHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHH
Confidence 1 1465 9999999999999999999 59999999999999999999999999999998654221100 0
Q ss_pred -------------CCC-c----cHH--H--HHHHHHH-HHhhhhhhhhhcccccCCCCC------hHHHHHHH-----Hh
Q 024681 130 -------------HGG-F----EEA--E--IDKVFRA-MEANYEAWAYGYAPLAVGADV------PAAVREFS-----RT 175 (264)
Q Consensus 130 -------------~~~-~----~~~--~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~~ 175 (264)
... + ... . ....... ...........+......... ......+. ..
T Consensus 193 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 272 (379)
T PRK00175 193 EVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKF 272 (379)
T ss_pred HHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHH
Confidence 000 0 000 0 0000000 000000111111111111000 00111111 11
Q ss_pred hcccCchhhhhhhhhhcC--------CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCc----eEEEec-CC
Q 024681 176 LFNMRPDISLFVSKTVFD--------TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN----TVELLK-IE 242 (264)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----~~~~~~-~~ 242 (264)
....++.........+.. .+..+.+.+|++|+|+|+|++|.++|++..+.+++.+++ . ++++++ ++
T Consensus 273 ~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~-a~~~~~l~~i~~~~ 351 (379)
T PRK00175 273 VERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLA-AGADVSYAEIDSPY 351 (379)
T ss_pred hhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHh-cCCCeEEEEeCCCC
Confidence 222233222222222111 235677889999999999999999999999999999987 4 677775 89
Q ss_pred CCcccccChhcHHHHHHHHhcC
Q 024681 243 GHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 243 gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
||++++|+|+++++.|.+||++
T Consensus 352 GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 352 GHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred CchhHhcCHHHHHHHHHHHHHh
Confidence 9999999999999999999964
No 28
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.5e-33 Score=209.96 Aligned_cols=246 Identities=18% Similarity=0.217 Sum_probs=154.4
Q ss_pred eeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
+++|+.+-+ .++.|+++||+++++..|..+++.| .||+|+++|+||||.|+... ....++.++++|+...++
T Consensus 12 ~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~---~~~~~~~~~~~d~~~~l~ 88 (276)
T PHA02857 12 YIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK---MMIDDFGVYVRDVVQHVV 88 (276)
T ss_pred EEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc---CCcCCHHHHHHHHHHHHH
Confidence 344544322 3456777799999999999999999 69999999999999997532 112246677777777776
Q ss_pred Hh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 82 TL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 82 ~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
.+ ...+++++||||||.+|+.+|.++|++++++|+++|..... .. . ....+......... .......+.
T Consensus 89 ~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~---~~--~-~~~~~~~~~~~~~~-~~~~~~~~~ 161 (276)
T PHA02857 89 TIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAE---AV--P-RLNLLAAKLMGIFY-PNKIVGKLC 161 (276)
T ss_pred HHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccc---cc--c-HHHHHHHHHHHHhC-CCCccCCCC
Confidence 54 34689999999999999999999999999999999853310 00 0 00111101000000 000000000
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhh--cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCce
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTV--FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNT 235 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 235 (264)
........ .....+..............+.... ...+....+.++++|+|+++|++|.++|++.++++.+.+...++
T Consensus 162 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~ 240 (276)
T PHA02857 162 PESVSRDM-DEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNRE 240 (276)
T ss_pred HhhccCCH-HHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCce
Confidence 00011110 0111111000000000000010100 11223456788999999999999999999999999988743379
Q ss_pred EEEecCCCCcccccCh---hcHHHHHHHHhc
Q 024681 236 VELLKIEGHLPHLSAP---AIVGPVIRRALS 263 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~---~~~~~~i~~fl~ 263 (264)
+.+++++||.++.|.+ +++.+.+.+||+
T Consensus 241 ~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~ 271 (276)
T PHA02857 241 IKIYEGAKHHLHKETDEVKKSVMKEIETWIF 271 (276)
T ss_pred EEEeCCCcccccCCchhHHHHHHHHHHHHHH
Confidence 9999999999998876 578899999986
No 29
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=1.4e-34 Score=209.72 Aligned_cols=225 Identities=26% Similarity=0.433 Sum_probs=154.1
Q ss_pred EEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHH
Q 024681 20 LVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAM 98 (264)
Q Consensus 20 vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 98 (264)
|||+||++++...|..+++.| +||+|+++|+||+|.|..... ...+ ++++.++|+.++++.++.++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~-~~~~-~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPD-YSPY-SIEDYAEDLAELLDALGIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSS-GSGG-SHHHHHHHHHHHHHHTTTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccc-cCCc-chhhhhhhhhhcccccccccccccccccccc
Confidence 799999999999999999999 999999999999999976421 1234 4999999999999999999999999999999
Q ss_pred HHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhh-cccccCCCCChHHHHHHHHhhc
Q 024681 99 IGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYG-YAPLAVGADVPAAVREFSRTLF 177 (264)
Q Consensus 99 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 177 (264)
+++.++.++|++|+++|++++......... .......+.............+... +.... ...........
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-- 150 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPS--RSFGPSFIRRLLAWRSRSLRRLASRFFYRWF----DGDEPEDLIRS-- 150 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----THHHHHHHHHH--
T ss_pred cccccccccccccccceeeccccccccccc--ccccchhhhhhhhcccccccccccccccccc----ccccccccccc--
Confidence 999999999999999999998653211000 0000011111111111111111100 00000 00111111111
Q ss_pred ccCchhhhhhhhh-hcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHH
Q 024681 178 NMRPDISLFVSKT-VFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGP 256 (264)
Q Consensus 178 ~~~~~~~~~~~~~-~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 256 (264)
........... ....+....++++++|+++++|++|.+++.+..+.+.+.+++ +++++++++||+++.++|+++++
T Consensus 151 --~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 151 --SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN-AELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT-EEEEEETTSSSTHHHHSHHHHHH
T ss_pred --cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCccHHHCHHHHhc
Confidence 01111111111 122334456677899999999999999999999999999998 89999999999999999999886
Q ss_pred H
Q 024681 257 V 257 (264)
Q Consensus 257 ~ 257 (264)
+
T Consensus 228 a 228 (228)
T PF12697_consen 228 A 228 (228)
T ss_dssp H
T ss_pred C
Confidence 4
No 30
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=8.6e-34 Score=209.32 Aligned_cols=245 Identities=22% Similarity=0.287 Sum_probs=156.8
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|.+.+.++|+|||+||++.+...|..+...| +||+|+++|+||||.|... .....+++++++++.++++.++
T Consensus 8 ~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~---~~~~~~~~~~~~~l~~~i~~l~ 84 (273)
T PLN02211 8 EVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSD---ADSVTTFDEYNKPLIDFLSSLP 84 (273)
T ss_pred ccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCC---cccCCCHHHHHHHHHHHHHhcC
Confidence 3444445455689999999999999999999999 6999999999999988542 1222259999999999999985
Q ss_pred -CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccH-HHHHHHHHHHHhhhhhhhhhcccccC-
Q 024681 85 -VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEE-AEIDKVFRAMEANYEAWAYGYAPLAV- 161 (264)
Q Consensus 85 -~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 161 (264)
.++++|+||||||.++..++.++|++|+++|++++..... .+.. ................+.........
T Consensus 85 ~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
T PLN02211 85 ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKL-------GFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQ 157 (273)
T ss_pred CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCC-------CCCHHHHHhccccchhhhccceeeeeccCCCC
Confidence 5899999999999999999999999999999998743210 0000 00000000000000000000000000
Q ss_pred CCCChHHHHHHHH-hhcccCchhhhhhh---------hhhcCCccccccCCc-ccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 162 GADVPAAVREFSR-TLFNMRPDISLFVS---------KTVFDTDLRGILGLV-RVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
..........+.. .+....+....... ..+...+......++ ++|+++|.|++|..+|++.++.+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~ 237 (273)
T PLN02211 158 PPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRW 237 (273)
T ss_pred CCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhC
Confidence 0000000000000 01111111111100 011111222223345 789999999999999999999999999
Q ss_pred CCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 231 GGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 231 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+. .+++.++ +||.+++++|+++.+.|.++..
T Consensus 238 ~~-~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 238 PP-SQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred Cc-cEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 98 7899997 8999999999999999998754
No 31
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=9e-34 Score=211.62 Aligned_cols=243 Identities=25% Similarity=0.349 Sum_probs=158.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CC--ceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEe
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NH--HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVG 92 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 92 (264)
.+|+||++|||+++...|+..+..| +. +.|+++|++|+|.++..+. ...|+ ..++++.+..++......+++++|
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~-~~~y~-~~~~v~~i~~~~~~~~~~~~~lvg 134 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPR-GPLYT-LRELVELIRRFVKEVFVEPVSLVG 134 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCC-CCcee-hhHHHHHHHHHHHhhcCcceEEEE
Confidence 4689999999999999999999999 54 9999999999996544322 23365 999999999999999989999999
Q ss_pred cChhHHHHHHHHHhCCCccceeEEec---CCCCCCCCCCCCCCccHHHHHHHHHHHHhhh--------hhhhhhcccc-c
Q 024681 93 HSVSAMIGLLASIRRPDLFTKLILIG---ASPRFLNDEDYHGGFEEAEIDKVFRAMEANY--------EAWAYGYAPL-A 160 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~~v~~~vl~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~ 160 (264)
||+||.+|+.+|+.+|+.|+++++++ +........ .......+........... ..+....... .
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 211 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKG---IKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLK 211 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcc---hhHHHHhhhhhccHhhhcCccccccchhheeHhhhccee
Confidence 99999999999999999999999554 432211110 0000001110000000000 0000000000 0
Q ss_pred CCCCChH-HHHHHHHhhccc-----CchhhhhhhhhhcC--CccccccCCcc-cCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 161 VGADVPA-AVREFSRTLFNM-----RPDISLFVSKTVFD--TDLRGILGLVR-VPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 161 ~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
....... ............ .......+...... ......+.++. +|+++++|++|+++|.+.++.+.+.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p 291 (326)
T KOG1454|consen 212 VVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP 291 (326)
T ss_pred eeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCC
Confidence 0000000 111111111000 00111111111111 23333456666 999999999999999999999999998
Q ss_pred CCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 232 GRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+ +++++++++||.+++|.|+++++.|..|+.+
T Consensus 292 n-~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 292 N-AELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred C-ceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 8 9999999999999999999999999999863
No 32
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=100.00 E-value=8.6e-33 Score=203.15 Aligned_cols=241 Identities=22% Similarity=0.360 Sum_probs=159.0
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH-HHHHHHHhCCCeEEEEecC
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD-LLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~S 94 (264)
+|+||++||++++...|..+.+.| ++|+|+++|+||+|.|+.+. ....+ ++++.+++ +..+++.++.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPD-EIERY-DFEEAAQDILATLLDQLGIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCC-ccChh-hHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 378999999999999999999999 99999999999999996531 11233 58899999 7888888888999999999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCC-ccHHHHHHHHHHHHhhhhhhhhhcccc-cCCC---CChHHH
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG-FEEAEIDKVFRAMEANYEAWAYGYAPL-AVGA---DVPAAV 169 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~ 169 (264)
+||.+++.+|.++|+.|++++++++.+........... .........+. ......+...+... .+.. ......
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFE--QEGLEAFLDDWYQQPLFASQKNLPPEQR 156 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHH--hcCccHHHHHHhcCceeeecccCChHHh
Confidence 99999999999999999999999986543221110000 00000000000 00011111111000 0000 111111
Q ss_pred HHHHHhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcc
Q 024681 170 REFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLP 246 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 246 (264)
..+........+.......... ...+....+.++++|+++++|++|..++ +..+.+.+..++ ++++.++++||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~ 234 (251)
T TIGR03695 157 QALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTLVIIANAGHNI 234 (251)
T ss_pred HHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcEEEEcCCCCCc
Confidence 1222221111222111111111 1223345567889999999999998764 566778888888 8999999999999
Q ss_pred cccChhcHHHHHHHHhc
Q 024681 247 HLSAPAIVGPVIRRALS 263 (264)
Q Consensus 247 ~~~~~~~~~~~i~~fl~ 263 (264)
++++|+++.+.|.+||+
T Consensus 235 ~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 235 HLENPEAFAKILLAFLE 251 (251)
T ss_pred CccChHHHHHHHHHHhC
Confidence 99999999999999984
No 33
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.1e-32 Score=208.52 Aligned_cols=249 Identities=18% Similarity=0.185 Sum_probs=153.1
Q ss_pred eeEEEEeCC-----CCceEEEecCCCCCh-hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 7 ALHVRVVGT-----GDRILVLAHGFGTDQ-SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 7 ~~~~~~~g~-----~~p~vv~~hG~~~~~-~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
+++|+.+++ .+++|||+||++.+. ..|..+...| +||+|+++|+||||.|+... ....+++.+++|+.+
T Consensus 44 ~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~~~~D~~~ 120 (330)
T PLN02298 44 SLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR---AYVPNVDLVVEDCLS 120 (330)
T ss_pred EEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc---ccCCCHHHHHHHHHH
Confidence 456655432 345799999998664 3567777778 79999999999999996421 111258899999999
Q ss_pred HHHHhCC------CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhh
Q 024681 79 ILDTLGV------NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAW 152 (264)
Q Consensus 79 ~~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
+++.+.. .+++|+||||||.+++.++.++|++|+++|++++........ ..... ...............
T Consensus 121 ~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~ 195 (330)
T PLN02298 121 FFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKI--RPPWP---IPQILTFVARFLPTL 195 (330)
T ss_pred HHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCccc--CCchH---HHHHHHHHHHHCCCC
Confidence 9998743 379999999999999999999999999999999864322110 00000 111111111000000
Q ss_pred hhhcccccCCCCCh-HHHHHHHHh-hcccCch-hhhhhhhhhc-CCccccccCCcccCEEEEecCCCCCcchhhHHHHHH
Q 024681 153 AYGYAPLAVGADVP-AAVREFSRT-LFNMRPD-ISLFVSKTVF-DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR 228 (264)
Q Consensus 153 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 228 (264)
.............. ......... ....... .......... .......+.++++|+|+++|++|.++|++.++.+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~ 275 (330)
T PLN02298 196 AIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYE 275 (330)
T ss_pred ccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHH
Confidence 00000000000000 000111000 0000000 0000000000 011235577889999999999999999999999988
Q ss_pred HcCCC-ceEEEecCCCCcccccChh----cHHHHHHHHhc
Q 024681 229 HLGGR-NTVELLKIEGHLPHLSAPA----IVGPVIRRALS 263 (264)
Q Consensus 229 ~~~~~-~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~ 263 (264)
.++.. ++++++++++|.++.++|+ ++.+.|.+||.
T Consensus 276 ~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~ 315 (330)
T PLN02298 276 EAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLN 315 (330)
T ss_pred HhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHH
Confidence 87522 7999999999999998885 46677778875
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.2e-31 Score=207.51 Aligned_cols=247 Identities=16% Similarity=0.195 Sum_probs=152.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcc-cchHHHHHHHHHHHHHHhCCCeEEEEec
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRR-YTTLDAYVDDLLNILDTLGVNRCAYVGH 93 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 93 (264)
++|+||++||++++...|...+..| ++|+|+++|+||||.|+.+...... ....+.+++++.++++.++.++++++||
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGh 183 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGH 183 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 4589999999999999998888999 8899999999999999754221111 1112245677888888889899999999
Q ss_pred ChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCC---CccHHHHHHHHHHH--------------Hh----hhhhh
Q 024681 94 SVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHG---GFEEAEIDKVFRAM--------------EA----NYEAW 152 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------------~~----~~~~~ 152 (264)
||||.+++.+|.++|++|+++|++++............ .........+.... .. ....+
T Consensus 184 S~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~ 263 (402)
T PLN02894 184 SFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRY 263 (402)
T ss_pred CHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHH
Confidence 99999999999999999999999998644322211100 00000000000000 00 00000
Q ss_pred h-hhccccc----CCCCChHHHHHHHHhhcccCchh--hhhhhh---hhcCCccccccCCcccCEEEEecCCCCCcchhh
Q 024681 153 A-YGYAPLA----VGADVPAAVREFSRTLFNMRPDI--SLFVSK---TVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 153 ~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 222 (264)
. ..+.... ...........+........+.. ...... .....+....+.++++|+++|+|++|.+.+ ..
T Consensus 264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~ 342 (402)
T PLN02894 264 TTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EG 342 (402)
T ss_pred HHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HH
Confidence 0 0000000 11111111111111111111111 011111 112344556678899999999999998765 45
Q ss_pred HHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 223 AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
...+.+..+..+++++++++||+++.|+|++|++.|.+|++
T Consensus 343 ~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~ 383 (402)
T PLN02894 343 AVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACR 383 (402)
T ss_pred HHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHH
Confidence 55555555433789999999999999999999999998875
No 35
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=1.7e-31 Score=200.35 Aligned_cols=250 Identities=17% Similarity=0.244 Sum_probs=155.6
Q ss_pred eeEEEEeCC-C-CceEEEecCCCCCh-hhHHHhhhhc-C-CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT-G-DRILVLAHGFGTDQ-SAWQRILPYL-N-HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~-~-~p~vv~~hG~~~~~-~~~~~~~~~l-~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+.|...+. + +|+|||+||++++. ..|..+...+ + ||+|+++|+||+|.|..+......+ +++++++++.++++
T Consensus 13 ~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~-~~~~~~~~~~~~~~ 91 (288)
T TIGR01250 13 YHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELW-TIDYFVDELEEVRE 91 (288)
T ss_pred eEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccc-cHHHHHHHHHHHHH
Confidence 456666653 3 57999999976555 4556666666 4 8999999999999997542111124 49999999999999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCC----CCCCccHHHHHHHHHHHHh-------hhh
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDED----YHGGFEEAEIDKVFRAMEA-------NYE 150 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-------~~~ 150 (264)
.++.++++++||||||.+++.+|.++|++++++|++++......... ........ .......... ...
T Consensus 92 ~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (288)
T TIGR01250 92 KLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPE-VRAAIKRCEASGDYDNPEYQ 170 (288)
T ss_pred HcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChh-HHHHHHHHHhccCcchHHHH
Confidence 99999999999999999999999999999999999987532110000 00000000 0000000000 000
Q ss_pred hhhhhcc--cccCCCCChHHHHHHHHhhcccCchhhh--------hhhhhhcCCccccccCCcccCEEEEecCCCCCcch
Q 024681 151 AWAYGYA--PLAVGADVPAAVREFSRTLFNMRPDISL--------FVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV 220 (264)
Q Consensus 151 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 220 (264)
.....+. ................. ........ .........+....+.++++|+++++|++|.+ ++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~ 246 (288)
T TIGR01250 171 EAVEVFYHHLLCRTRKWPEALKHLKS---GMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TP 246 (288)
T ss_pred HHHHHHHHHhhcccccchHHHHHHhh---ccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CH
Confidence 0000000 00000000000000000 00000000 00001112233455678999999999999985 56
Q ss_pred hhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 221 SVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+..+.+.+.+++ .++++++++||+++.++|+++.+.|.+||+
T Consensus 247 ~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 247 EAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 788889998988 899999999999999999999999999985
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=100.00 E-value=1.7e-31 Score=207.21 Aligned_cols=242 Identities=25% Similarity=0.324 Sum_probs=160.1
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
.++|...|+ .+|+|||+||++++...|..+...| ++|+|+++|+||||.|... ...+ +++++++++.++++.++
T Consensus 120 ~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~---~~~~-~~~~~~~~~~~~~~~~~ 195 (371)
T PRK14875 120 TVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKA---VGAG-SLDELAAAVLAFLDALG 195 (371)
T ss_pred EEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCC---CCCC-CHHHHHHHHHHHHHhcC
Confidence 467777775 4579999999999999999999999 8899999999999999643 1223 59999999999999999
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC-CCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE-DYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
.++++++|||+||.+++.+|.++|++++++|++++........ .+...+.... ....+..+........ ..
T Consensus 196 ~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~ 267 (371)
T PRK14875 196 IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAE-------SRRELKPVLELLFADP-AL 267 (371)
T ss_pred CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhccc-------chhHHHHHHHHHhcCh-hh
Confidence 8999999999999999999999999999999998753221110 0000000000 0000001111000000 00
Q ss_pred CChHHHHHHHHhhcccC-chhhhhhhhh-----hcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEE
Q 024681 164 DVPAAVREFSRTLFNMR-PDISLFVSKT-----VFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 237 (264)
................. .......... ....+....+.++++|+++++|++|.++|.+..+.+. ++ .++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~---~~-~~~~ 343 (371)
T PRK14875 268 VTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP---DG-VAVH 343 (371)
T ss_pred CCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc---CC-CeEE
Confidence 00011111111100000 0000011111 0112334456788999999999999999987665432 34 7899
Q ss_pred EecCCCCcccccChhcHHHHHHHHhcC
Q 024681 238 LLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 238 ~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+++++||++++++|+++.+.|.+||++
T Consensus 344 ~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 344 VLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 999999999999999999999999974
No 37
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=100.00 E-value=2.4e-31 Score=234.16 Aligned_cols=254 Identities=19% Similarity=0.255 Sum_probs=166.7
Q ss_pred eeEEEEeCC--CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCC-----CCcccchHHHHHHHHHH
Q 024681 7 ALHVRVVGT--GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYF-----DFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 7 ~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~-----~~~~~~~~~~~~~~~~~ 78 (264)
.++|++.|+ ++|+|||+||++++...|..++..| ++|+|+++|+||||.|..... ....+ +++++++++.+
T Consensus 1359 ~i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~-si~~~a~~l~~ 1437 (1655)
T PLN02980 1359 LIKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTL-SVELVADLLYK 1437 (1655)
T ss_pred EEEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccC-CHHHHHHHHHH
Confidence 466777775 3579999999999999999999999 899999999999999964321 11234 49999999999
Q ss_pred HHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCC-ccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG-FEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 79 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
+++.++.++++++||||||.+++.+|.++|++|+++|++++.+........... ............ .....+...+.
T Consensus 1438 ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~--~g~~~~~~~~~ 1515 (1655)
T PLN02980 1438 LIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLID--HGLEIFLENWY 1515 (1655)
T ss_pred HHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHh--hhHHHHHHHhc
Confidence 999999999999999999999999999999999999999876433211100000 000000000000 00001111100
Q ss_pred -cccCC--CCChHHHHHHHHhhcccCchhhhhhhhhh---cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 158 -PLAVG--ADVPAAVREFSRTLFNMRPDISLFVSKTV---FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 158 -~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
..... ...+......................... ...+..+.+.++++|+|+|+|++|..++ +.++++.+.++
T Consensus 1516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~ 1594 (1655)
T PLN02980 1516 SGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIG 1594 (1655)
T ss_pred cHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcc
Confidence 00000 00011111111111111111111111111 1234456788999999999999999875 56677777776
Q ss_pred CC-----------ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 232 GR-----------NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 232 ~~-----------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+. +++++++++||++++|+|+++++.|.+||++
T Consensus 1595 ~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1595 KSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred ccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 51 4799999999999999999999999999963
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=5.4e-31 Score=202.22 Aligned_cols=235 Identities=18% Similarity=0.182 Sum_probs=150.0
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC----CeEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV----NRCA 89 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 89 (264)
.+++||++||++++...|..++..| .||+|+++|+||||.|+... ....+++.+++|+.++++.+.. .+++
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~ 211 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH---GYVPSLDYVVEDTEAFLEKIRSENPGVPCF 211 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCCcCHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 4469999999999999999999999 79999999999999997531 1112478889999999888742 3799
Q ss_pred EEecChhHHHHHHHHHhCC---CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh-hhhhhhh-hcccccCC-C
Q 024681 90 YVGHSVSAMIGLLASIRRP---DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA-NYEAWAY-GYAPLAVG-A 163 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~-~ 163 (264)
++||||||.+++.++. +| ++++++|+.+|....... .. .......+.. ....+.. ........ .
T Consensus 212 lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~--------~~-~~~~~~~l~~~~~p~~~~~~~~~~~~~~s 281 (395)
T PLN02652 212 LFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA--------HP-IVGAVAPIFSLVAPRFQFKGANKRGIPVS 281 (395)
T ss_pred EEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc--------hH-HHHHHHHHHHHhCCCCcccCcccccCCcC
Confidence 9999999999998765 55 479999999875322110 00 0001111100 0000000 00000000 0
Q ss_pred CChHHHHHHH-HhhcccCchhhhhhhhhh-cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEec
Q 024681 164 DVPAAVREFS-RTLFNMRPDISLFVSKTV-FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLK 240 (264)
Q Consensus 164 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (264)
.......... .................. ........+.++++|+|+++|++|.++|++.++.+++.+++. +++++++
T Consensus 282 ~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ 361 (395)
T PLN02652 282 RDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYD 361 (395)
T ss_pred CCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEEC
Confidence 0111111111 000000000000000000 011234557788999999999999999999999998887643 7899999
Q ss_pred CCCCccccc-ChhcHHHHHHHHhc
Q 024681 241 IEGHLPHLS-APAIVGPVIRRALS 263 (264)
Q Consensus 241 ~~gH~~~~~-~~~~~~~~i~~fl~ 263 (264)
+++|.++.| .++++.+.+.+||+
T Consensus 362 ga~H~l~~e~~~e~v~~~I~~FL~ 385 (395)
T PLN02652 362 GFLHDLLFEPEREEVGRDIIDWME 385 (395)
T ss_pred CCeEEeccCCCHHHHHHHHHHHHH
Confidence 999998776 78999999999986
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.98 E-value=1.4e-30 Score=196.10 Aligned_cols=252 Identities=17% Similarity=0.233 Sum_probs=152.7
Q ss_pred eeeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 6 ~~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+++|...|+ +.++|||+||++++...+ .+...+ .+|+|+++|+||||.|+... ....+ +.+++++|+..++++
T Consensus 15 ~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~-~~~~~-~~~~~~~dl~~l~~~ 91 (306)
T TIGR01249 15 HQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHA-CLEEN-TTWDLVADIEKLREK 91 (306)
T ss_pred cEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCC-CcccC-CHHHHHHHHHHHHHH
Confidence 4688988886 356899999988776543 334444 68999999999999997542 11234 378999999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCC--CC---ccHHHHHHHHHHHHhhh--hhhhhh
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH--GG---FEEAEIDKVFRAMEANY--EAWAYG 155 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~--~~~~~~ 155 (264)
++.++++++||||||.+++.++.++|++++++|++++.........+. .. .....+..+........ ..+...
T Consensus 92 l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (306)
T TIGR01249 92 LGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNA 171 (306)
T ss_pred cCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHH
Confidence 999999999999999999999999999999999998753321100000 00 00011111110100000 111111
Q ss_pred cccccCCCCChHH-------HHHHHH-hhcccCc---------hhhhhhhh---------hhc--CCccccccCCc-ccC
Q 024681 156 YAPLAVGADVPAA-------VREFSR-TLFNMRP---------DISLFVSK---------TVF--DTDLRGILGLV-RVP 206 (264)
Q Consensus 156 ~~~~~~~~~~~~~-------~~~~~~-~~~~~~~---------~~~~~~~~---------~~~--~~~~~~~~~~i-~~P 206 (264)
+........ ... ...+.. ......+ .....+.. ... ..+....+.++ ++|
T Consensus 172 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P 250 (306)
T TIGR01249 172 YHDRLQSGD-EETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILDNISKIRNIP 250 (306)
T ss_pred HHHHccCCC-HHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCC
Confidence 111111111 110 000110 1111100 00000000 000 11123455666 589
Q ss_pred EEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccC-hhcHHHHHHHHh
Q 024681 207 CVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA-PAIVGPVIRRAL 262 (264)
Q Consensus 207 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl 262 (264)
+++++|++|.++|.+.++.+++.+++ .++++++++||.++.+. .+.+.+.+.+||
T Consensus 251 ~lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 251 TYIVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAFDPNNLAALVHALETYL 306 (306)
T ss_pred eEEEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCCChHHHHHHHHHHHHhC
Confidence 99999999999999999999999998 89999999999986432 244555555543
No 40
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=4.4e-30 Score=190.12 Aligned_cols=248 Identities=17% Similarity=0.166 Sum_probs=162.5
Q ss_pred eeeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHH
Q 024681 6 EALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 6 ~~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
..++|..+-. ...+||++||++.+..-|..++..| +||.|+++|+||||.|.. .......++.++.+|+.+++
T Consensus 20 ~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r--~~rg~~~~f~~~~~dl~~~~ 97 (298)
T COG2267 20 TRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPR--GQRGHVDSFADYVDDLDAFV 97 (298)
T ss_pred ceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCC--CCcCCchhHHHHHHHHHHHH
Confidence 3456665543 2258999999999999999999999 999999999999999972 11234446899999999999
Q ss_pred HHhC----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 81 DTLG----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 81 ~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
+... ..+++++||||||.+++.++.+++.+++++|+.+|...... ........... ......+...+
T Consensus 98 ~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~------~~~~~~~~~~~---~~~~~~~~p~~ 168 (298)
T COG2267 98 ETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG------AILRLILARLA---LKLLGRIRPKL 168 (298)
T ss_pred HHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh------hHHHHHHHHHh---ccccccccccc
Confidence 8875 25999999999999999999999999999999999643221 00000000000 00111111100
Q ss_pred --cc----c---cCCCCChHHHHHHHHhhc-ccCchhhhhhhhhhcC--CccccccCCcccCEEEEecCCCCCcc-hhhH
Q 024681 157 --AP----L---AVGADVPAAVREFSRTLF-NMRPDISLFVSKTVFD--TDLRGILGLVRVPCVIIQTSKDVSVP-VSVA 223 (264)
Q Consensus 157 --~~----~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P~l~i~g~~D~~~~-~~~~ 223 (264)
.. . ......+...+.+..... .........+...... ........++++|+|+++|++|.+++ .+..
T Consensus 169 ~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~ 248 (298)
T COG2267 169 PVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGL 248 (298)
T ss_pred ccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHH
Confidence 00 0 001111222333332221 1111111111111111 12334466789999999999999999 6888
Q ss_pred HHHHHHcCCC-ceEEEecCCCCcccccCh---hcHHHHHHHHhcC
Q 024681 224 EYLQRHLGGR-NTVELLKIEGHLPHLSAP---AIVGPVIRRALSR 264 (264)
Q Consensus 224 ~~~~~~~~~~-~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 264 (264)
.++.+..... +++.+++|+.|.++.|.. +++.+.+.+|+.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 249 ARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred HHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 8887777553 689999999998777753 7888888888853
No 41
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=8.1e-30 Score=180.20 Aligned_cols=239 Identities=17% Similarity=0.203 Sum_probs=163.0
Q ss_pred ceEEEecCCCCCh-hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC------CCeE
Q 024681 18 RILVLAHGFGTDQ-SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG------VNRC 88 (264)
Q Consensus 18 p~vv~~hG~~~~~-~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 88 (264)
..|+++||++... ..|..++..| .||.|+++|++|||.|+... .-..+++..++|+....+... ..+.
T Consensus 55 ~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~---~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~ 131 (313)
T KOG1455|consen 55 GLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLH---AYVPSFDLVVDDVISFFDSIKEREENKGLPR 131 (313)
T ss_pred eEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCc---ccCCcHHHHHHHHHHHHHHHhhccccCCCCe
Confidence 4899999999876 7888899999 99999999999999998631 112368899999998888642 2389
Q ss_pred EEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC--CCh
Q 024681 89 AYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA--DVP 166 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 166 (264)
.|+||||||.+++.++.+.|+..+++|+++|-........ ..+....++..+......|...-....... ..+
T Consensus 132 FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~k-----p~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp 206 (313)
T KOG1455|consen 132 FLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTK-----PHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDP 206 (313)
T ss_pred eeeecCcchHHHHHHHhhCCcccccceeeecccccCCccC-----CCcHHHHHHHHHHHhCCceeecCCccccccccCCH
Confidence 9999999999999999999999999999998644322211 122233333333333344431111101111 111
Q ss_pred HHHHHHHHhhcccCch-hhhhhhhhh-cCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCC
Q 024681 167 AAVREFSRTLFNMRPD-ISLFVSKTV-FDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEG 243 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~g 243 (264)
................ ......+.+ ...+....+.++++|.+++||+.|.+++++.++.+++..+.. +++.++||.=
T Consensus 207 ~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~ 286 (313)
T KOG1455|consen 207 EKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMW 286 (313)
T ss_pred HHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHH
Confidence 1222222222211111 222222222 134556778899999999999999999999999999998765 8999999999
Q ss_pred Ccccc----cChhcHHHHHHHHhcC
Q 024681 244 HLPHL----SAPAIVGPVIRRALSR 264 (264)
Q Consensus 244 H~~~~----~~~~~~~~~i~~fl~~ 264 (264)
|.++. |+-+.|...|.+||++
T Consensus 287 H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 287 HSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HHhhcCCCchhHHHHHHHHHHHHHh
Confidence 98775 2336778888888863
No 42
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.1e-28 Score=188.80 Aligned_cols=262 Identities=18% Similarity=0.252 Sum_probs=172.8
Q ss_pred CCcc--eeeEEEEeCC----CCceEEEecCCCCChh-------------hHHHhhh---hc--CCceEEEecCCCCCCCC
Q 024681 2 GDLL--EALHVRVVGT----GDRILVLAHGFGTDQS-------------AWQRILP---YL--NHHRVIMFDLVCAGSVN 57 (264)
Q Consensus 2 g~~~--~~~~~~~~g~----~~p~vv~~hG~~~~~~-------------~~~~~~~---~l--~g~~v~~~d~~g~G~s~ 57 (264)
|+.+ -++.|+.+|. +.++||++|++.+++. .|..++- .| ..|.||++|..|-|.|+
T Consensus 35 G~~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~ 114 (389)
T PRK06765 35 GRTIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVK 114 (389)
T ss_pred CCCcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCC
Confidence 5554 5789999996 2479999999988642 2666553 45 79999999999976532
Q ss_pred CC--------CC----------CCcccchHHHHHHHHHHHHHHhCCCeEE-EEecChhHHHHHHHHHhCCCccceeEEec
Q 024681 58 PD--------YF----------DFRRYTTLDAYVDDLLNILDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLILIG 118 (264)
Q Consensus 58 ~~--------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~ 118 (264)
.+ .. +...+ +++++++++..++++++++++. ++||||||.+++.+|.++|++|+++|+++
T Consensus 115 ~p~~g~tgp~s~~p~tg~~~~~~fP~~-t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia 193 (389)
T PRK06765 115 DPNVITTGPASINPKTGKPYGMDFPVV-TILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVI 193 (389)
T ss_pred CCCCCCCCCCCCCcCCCCccCCCCCcC-cHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEe
Confidence 11 00 12235 4999999999999999999986 99999999999999999999999999998
Q ss_pred CCCCCCCCC----------------CCCCCc------cHHHHHHHHH--HHHhhhhhh-hhhccccc-CCC------CCh
Q 024681 119 ASPRFLNDE----------------DYHGGF------EEAEIDKVFR--AMEANYEAW-AYGYAPLA-VGA------DVP 166 (264)
Q Consensus 119 ~~~~~~~~~----------------~~~~~~------~~~~~~~~~~--~~~~~~~~~-~~~~~~~~-~~~------~~~ 166 (264)
+.+...... .+..+. ....+..... ........+ ...+.... ... ...
T Consensus 194 ~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~ 273 (389)
T PRK06765 194 GNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTL 273 (389)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccch
Confidence 864421110 000000 0011110000 000001111 11111110 000 000
Q ss_pred HHHHHHH-----HhhcccCchhhhhhhhhhcCC-------ccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC--
Q 024681 167 AAVREFS-----RTLFNMRPDISLFVSKTVFDT-------DLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG-- 232 (264)
Q Consensus 167 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 232 (264)
...+.+. +.....++..+......+... +..+.+.++++|+|+|+|++|.++|++..+++.+.+++
T Consensus 274 ~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~ 353 (389)
T PRK06765 274 TSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQG 353 (389)
T ss_pred hhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC
Confidence 0122222 223344555555444444333 45667889999999999999999999999999999862
Q ss_pred -CceEEEecC-CCCcccccChhcHHHHHHHHhcC
Q 024681 233 -RNTVELLKI-EGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 233 -~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.++++++++ +||+.++++|+++.+.|.+||++
T Consensus 354 ~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 354 KYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 278999985 99999999999999999999974
No 43
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.97 E-value=1.4e-30 Score=172.40 Aligned_cols=240 Identities=15% Similarity=0.148 Sum_probs=169.4
Q ss_pred eeeEEEEeCCCCceEEEecCCC-CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 6 EALHVRVVGTGDRILVLAHGFG-TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 6 ~~~~~~~~g~~~p~vv~~hG~~-~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+++|...|.+...|++++|.- +....|.+....| ..++|+++|-||+|.|.++..+..--. +..-+++...+++
T Consensus 31 ~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~f-f~~Da~~avdLM~ 109 (277)
T KOG2984|consen 31 TQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQF-FMKDAEYAVDLME 109 (277)
T ss_pred ceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHH-HHHhHHHHHHHHH
Confidence 4688999999888999999954 5557888887777 459999999999999988754443332 5666777788999
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
.+..+++.++|||-||..|+..|+++++.|.++|+.++......... ..+..+ .....|......-..
T Consensus 110 aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~-----------ma~kgi-Rdv~kWs~r~R~P~e 177 (277)
T KOG2984|consen 110 ALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA-----------MAFKGI-RDVNKWSARGRQPYE 177 (277)
T ss_pred HhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH-----------HHHhch-HHHhhhhhhhcchHH
Confidence 99999999999999999999999999999999999998654322110 011111 122333322221111
Q ss_pred CCCChH-HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec
Q 024681 162 GADVPA-AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240 (264)
Q Consensus 162 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (264)
.....+ ..+.+.+.. ....++.......-.+..+++++||+++++|+.|++++......+....+. +++.+.|
T Consensus 178 ~~Yg~e~f~~~wa~wv-----D~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~-a~~~~~p 251 (277)
T KOG2984|consen 178 DHYGPETFRTQWAAWV-----DVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSL-AKVEIHP 251 (277)
T ss_pred HhcCHHHHHHHHHHHH-----HHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhccc-ceEEEcc
Confidence 111111 111111110 001111111111113456889999999999999999999888888888888 8999999
Q ss_pred CCCCcccccChhcHHHHHHHHhcC
Q 024681 241 IEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.++|.+++..+++|+..+.+||++
T Consensus 252 eGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 252 EGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred CCCcceeeechHHHHHHHHHHHhc
Confidence 999999999999999999999974
No 44
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=2.5e-29 Score=206.09 Aligned_cols=253 Identities=17% Similarity=0.228 Sum_probs=153.9
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
+++|...|+ +.|+|||+||++++...|..+.+.| ++|+|+++|+||||.|+... ....|+ ++++++|+..+++.++
T Consensus 14 ~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~-~~~~~~-~~~~a~dl~~~i~~l~ 91 (582)
T PRK05855 14 RLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPK-RTAAYT-LARLADDFAAVIDAVS 91 (582)
T ss_pred EEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCC-cccccC-HHHHHHHHHHHHHHhC
Confidence 577888886 4589999999999999999999999 99999999999999997532 123454 9999999999999998
Q ss_pred CCe-EEEEecChhHHHHHHHHHh--CCCccceeEEecCCCCCCCCCCCCCCc---cHHHHHHHHHHHHhhhhhhh---hh
Q 024681 85 VNR-CAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASPRFLNDEDYHGGF---EEAEIDKVFRAMEANYEAWA---YG 155 (264)
Q Consensus 85 ~~~-~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~ 155 (264)
.++ ++|+||||||.+++.++.+ .++++..++.++++............. .................... ..
T Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (582)
T PRK05855 92 PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPV 171 (582)
T ss_pred CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCC
Confidence 765 9999999999999888776 234455554444321100000000000 00001111111000000000 00
Q ss_pred cccccCCCCChHHHHHHHHhhcccCc-------------hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh
Q 024681 156 YAPLAVGADVPAAVREFSRTLFNMRP-------------DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV 222 (264)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 222 (264)
..................+....... .....................+++|+++|+|++|.++|++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~ 251 (582)
T PRK05855 172 LPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPAL 251 (582)
T ss_pred CcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHH
Confidence 00000000000000000000000000 00000000011111122345589999999999999999999
Q ss_pred HHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 223 AEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+.+.+.+++ .++++++ +||+++.|+|+++.+.|.+|+.
T Consensus 252 ~~~~~~~~~~-~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 290 (582)
T PRK05855 252 YDDLSRWVPR-LWRREIK-AGHWLPMSHPQVLAAAVAEFVD 290 (582)
T ss_pred hccccccCCc-ceEEEcc-CCCcchhhChhHHHHHHHHHHH
Confidence 9999888887 7888877 7999999999999999999986
No 45
>PLN02511 hydrolase
Probab=99.97 E-value=7.6e-29 Score=191.28 Aligned_cols=241 Identities=18% Similarity=0.212 Sum_probs=144.8
Q ss_pred CCCceEEEecCCCCChhh-H-HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC----C
Q 024681 15 TGDRILVLAHGFGTDQSA-W-QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV----N 86 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~-~-~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 86 (264)
+++|+||++||+++++.. | ..++..+ +||+|+++|+||||.|.... +..| .....+|+.++++++.. .
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~--~~~~--~~~~~~Dl~~~i~~l~~~~~~~ 173 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT--PQFY--SASFTGDLRQVVDHVAGRYPSA 173 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC--cCEE--cCCchHHHHHHHHHHHHHCCCC
Confidence 356899999999776542 4 5566555 99999999999999996531 2222 24567778777777754 5
Q ss_pred eEEEEecChhHHHHHHHHHhCCCc--cceeEEecCCCCCC-CCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccc--cC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDL--FTKLILIGASPRFL-NDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL--AV 161 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 161 (264)
+++++||||||.+++.++.++|++ |.++++++++.... ....+...+.......+...+..........+... .+
T Consensus 174 ~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~ 253 (388)
T PLN02511 174 NLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEY 253 (388)
T ss_pred CEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 899999999999999999999987 88888887643220 00001111100000001111111000000000000 00
Q ss_pred CCC---ChHHHHHHHHhhccc--CchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH-HHHHHHcCCCce
Q 024681 162 GAD---VPAAVREFSRTLFNM--RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA-EYLQRHLGGRNT 235 (264)
Q Consensus 162 ~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~ 235 (264)
... ......++...+... .......+ +...+....+.+|++|+|+|+|++|+++|.+.. ....+.+++ ++
T Consensus 254 ~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~y---y~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~-~~ 329 (388)
T PLN02511 254 NIPLVANAKTVRDFDDGLTRVSFGFKSVDAY---YSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPN-CL 329 (388)
T ss_pred CHHHHHhCCCHHHHHHhhhhhcCCCCCHHHH---HHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC-EE
Confidence 000 000111111111110 00001111 112344567889999999999999999997754 456677888 89
Q ss_pred EEEecCCCCcccccChhc------HHHHHHHHhc
Q 024681 236 VELLKIEGHLPHLSAPAI------VGPVIRRALS 263 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~~~------~~~~i~~fl~ 263 (264)
+++++++||+.++|+|+. +.+.+.+||+
T Consensus 330 l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 330 LIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred EEECCCcceeccccCCCCCCCCccHHHHHHHHHH
Confidence 999999999999999876 4888888885
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=1.6e-28 Score=165.36 Aligned_cols=221 Identities=19% Similarity=0.242 Sum_probs=156.0
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEEEEe
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCAYVG 92 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G 92 (264)
..|+|+||+.++....+.+.+.| +||.|+++.+||||..... .-.. +.++|.+++.+..+.+ +.+.|.++|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~---fl~t-~~~DW~~~v~d~Y~~L~~~gy~eI~v~G 91 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED---FLKT-TPRDWWEDVEDGYRDLKEAGYDEIAVVG 91 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH---HhcC-CHHHHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 59999999999999999999999 9999999999999988532 1122 3666666666555544 678999999
Q ss_pred cChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHH
Q 024681 93 HSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREF 172 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
-||||.+++.+|.++| ++++|.++++....... ..+..+..... .... +.....+..+..
T Consensus 92 lSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~--------~iie~~l~y~~-~~kk---------~e~k~~e~~~~e 151 (243)
T COG1647 92 LSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR--------IIIEGLLEYFR-NAKK---------YEGKDQEQIDKE 151 (243)
T ss_pred ecchhHHHHHHHhhCC--ccceeeecCCcccccch--------hhhHHHHHHHH-Hhhh---------ccCCCHHHHHHH
Confidence 9999999999999998 89999999864322211 11111221111 1111 112223334444
Q ss_pred HHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCccccc-C
Q 024681 173 SRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPHLS-A 250 (264)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~-~ 250 (264)
++.+..........+... ..+....+..|..|++++.|.+|+.+|.+.+..+.+..... .++.+++++||.+..+ .
T Consensus 152 ~~~~~~~~~~~~~~~~~~--i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~E 229 (243)
T COG1647 152 MKSYKDTPMTTTAQLKKL--IKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKE 229 (243)
T ss_pred HHHhhcchHHHHHHHHHH--HHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchh
Confidence 444433223332222221 12344567889999999999999999999999999887543 8999999999976665 4
Q ss_pred hhcHHHHHHHHhcC
Q 024681 251 PAIVGPVIRRALSR 264 (264)
Q Consensus 251 ~~~~~~~i~~fl~~ 264 (264)
.+++.+.+..||+.
T Consensus 230 rd~v~e~V~~FL~~ 243 (243)
T COG1647 230 RDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHHHhhC
Confidence 58999999999973
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.97 E-value=9.9e-29 Score=177.53 Aligned_cols=232 Identities=19% Similarity=0.243 Sum_probs=160.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC----CCeE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG----VNRC 88 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 88 (264)
..|+++++||+.++...|+.+...| -+-.|+++|.|.||.|... ..+ +.+.+++|+..+++..+ ..++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~----~~h-~~~~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI----TVH-NYEAMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccc----ccc-CHHHHHHHHHHHHHHcccccccCCc
Confidence 4589999999999999999999999 5779999999999999764 223 37889999999999884 5799
Q ss_pred EEEecChhH-HHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh---------hhhhhhhhccc
Q 024681 89 AYVGHSVSA-MIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA---------NYEAWAYGYAP 158 (264)
Q Consensus 89 ~l~G~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 158 (264)
+++|||||| .+++..+...|+.+..+|+++.+|...... .......+..+.. ........+..
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~-------~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~ 198 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRS-------YGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE 198 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcc-------cchHHHHHHHHHhccccccccccHHHHHHHHHH
Confidence 999999999 778888889999999999999876421111 0011111111110 00000001111
Q ss_pred ccCCCCChHHHHHHHHhhc-----------ccCchhhhhhhhhhcCCcccccc--CCcccCEEEEecCCCCCcchhhHHH
Q 024681 159 LAVGADVPAAVREFSRTLF-----------NMRPDISLFVSKTVFDTDLRGIL--GLVRVPCVIIQTSKDVSVPVSVAEY 225 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~ 225 (264)
.. .+..+..+...-. ..+.......+.......++..+ .....||+++.|.++.+++.+...+
T Consensus 199 ~~----~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~ 274 (315)
T KOG2382|consen 199 VG----FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPR 274 (315)
T ss_pred Hh----cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHH
Confidence 00 0011111111111 11222223333332122222333 5568899999999999999999999
Q ss_pred HHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 226 LQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 226 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
+.+.+|+ +++..++++||+++.|+|+++.+.|.+|+.+
T Consensus 275 ~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 275 MEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred HHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 9999999 9999999999999999999999999999864
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.96 E-value=4.8e-28 Score=183.34 Aligned_cols=251 Identities=14% Similarity=0.081 Sum_probs=150.6
Q ss_pred eEEEEeCC--CCceEEEecCCCCChh-hH-------------------------HHhhhhc--CCceEEEecCCCCCCCC
Q 024681 8 LHVRVVGT--GDRILVLAHGFGTDQS-AW-------------------------QRILPYL--NHHRVIMFDLVCAGSVN 57 (264)
Q Consensus 8 ~~~~~~g~--~~p~vv~~hG~~~~~~-~~-------------------------~~~~~~l--~g~~v~~~d~~g~G~s~ 57 (264)
|+++.+.. .+.+|+++||++++.. .| ..+++.| +||+|+++|+||||.|.
T Consensus 10 l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~ 89 (332)
T TIGR01607 10 LKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESD 89 (332)
T ss_pred EEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCc
Confidence 55555432 3459999999999885 21 3578888 89999999999999997
Q ss_pred CCCCCCcccchHHHHHHHHHHHHHHhC------------------------CCeEEEEecChhHHHHHHHHHhCCC----
Q 024681 58 PDYFDFRRYTTLDAYVDDLLNILDTLG------------------------VNRCAYVGHSVSAMIGLLASIRRPD---- 109 (264)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~l~G~S~Gg~~a~~~a~~~p~---- 109 (264)
..........+++++++|+..+++.+. ..|++|+||||||.+++.++.++++
T Consensus 90 ~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~ 169 (332)
T TIGR01607 90 GLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNEN 169 (332)
T ss_pred cccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccccc
Confidence 532212222369999999999887642 2479999999999999999876542
Q ss_pred ----ccceeEEecCCCCCCCCCCCCCCcc-HHHHHHHHHHHHhhhhhhhhhcc--cccCCCCChHHHHHHHHhhcccCch
Q 024681 110 ----LFTKLILIGASPRFLNDEDYHGGFE-EAEIDKVFRAMEANYEAWAYGYA--PLAVGADVPAAVREFSRTLFNMRPD 182 (264)
Q Consensus 110 ----~v~~~vl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (264)
.++++|+++|......... ..... ......+...+. .+...+. ........+...+.+..........
T Consensus 170 ~~~~~i~g~i~~s~~~~i~~~~~-~~~~~~~~~~~~l~~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~ 244 (332)
T TIGR01607 170 NDKLNIKGCISLSGMISIKSVGS-DDSFKFKYFYLPVMNFMS----RVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGG 244 (332)
T ss_pred ccccccceEEEeccceEEecccC-CCcchhhhhHHHHHHHHH----HHCCcccccCccccccChhhhhHHhcCccccCCc
Confidence 5889998887532211000 00000 000111111111 1111110 0000001111222222211111111
Q ss_pred hhhhhhhhhcC--CccccccCCc--ccCEEEEecCCCCCcchhhHHHHHHHcCC-CceEEEecCCCCcccccC-hhcHHH
Q 024681 183 ISLFVSKTVFD--TDLRGILGLV--RVPCVIIQTSKDVSVPVSVAEYLQRHLGG-RNTVELLKIEGHLPHLSA-PAIVGP 256 (264)
Q Consensus 183 ~~~~~~~~~~~--~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~-~~~~~~ 256 (264)
....+...+.. ......+.++ ++|+|+++|++|.+++++.++.+.+.+.. .+++.++++++|.++.|. ++++.+
T Consensus 245 ~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~ 324 (332)
T TIGR01607 245 ITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLK 324 (332)
T ss_pred ccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHH
Confidence 11111111111 0112233444 78999999999999999999998877642 278999999999998875 688999
Q ss_pred HHHHHhc
Q 024681 257 VIRRALS 263 (264)
Q Consensus 257 ~i~~fl~ 263 (264)
.|.+||+
T Consensus 325 ~i~~wL~ 331 (332)
T TIGR01607 325 KIIEWIS 331 (332)
T ss_pred HHHHHhh
Confidence 9999986
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.95 E-value=8.9e-27 Score=176.52 Aligned_cols=242 Identities=15% Similarity=0.062 Sum_probs=137.6
Q ss_pred CCceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 16 GDRILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
.+|+||++||++++.. .+..++..| +||+|+++|+||||.+.............++....+..+.+..+..+++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~v 136 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAV 136 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEE
Confidence 3579999999987643 346688888 899999999999998753211111111233433333334444566789999
Q ss_pred ecChhHHHHHHHHHhCCCc--cceeEEecCCCCCCCCCC-CCCCccHHHHHHH-HHHHHhhhhhhhhhcccccCCCCChH
Q 024681 92 GHSVSAMIGLLASIRRPDL--FTKLILIGASPRFLNDED-YHGGFEEAEIDKV-FRAMEANYEAWAYGYAPLAVGADVPA 167 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
||||||.+++.++.++++. +.++|+++++........ ...... ...... ...+..........+.... . ...+
T Consensus 137 G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~-~-~~~~ 213 (324)
T PRK10985 137 GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFS-RVYQRYLLNLLKANAARKLAAYPGTL-P-INLA 213 (324)
T ss_pred EecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHhccccc-c-CCHH
Confidence 9999999988888876544 889999987543211000 000000 000100 1111111111111111100 0 0111
Q ss_pred ------HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC
Q 024681 168 ------AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 168 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
...++.+... .+..............+....++++++|+++|+|++|++++++....+.+..++ .+++++++
T Consensus 214 ~~~~~~~~~~fd~~~~-~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~ 291 (324)
T PRK10985 214 QLKSVRRLREFDDLIT-ARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPN-VEYQLTEH 291 (324)
T ss_pred HHhcCCcHHHHhhhhe-eccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCC-eEEEECCC
Confidence 1111111111 111111111222222334566789999999999999999998888888777777 89999999
Q ss_pred CCCcccccCh-----hcHHHHHHHHh
Q 024681 242 EGHLPHLSAP-----AIVGPVIRRAL 262 (264)
Q Consensus 242 ~gH~~~~~~~-----~~~~~~i~~fl 262 (264)
+||+.+.+.. .-.-+.+.+|+
T Consensus 292 ~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 292 GGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred CCceeeCCCCCCCCCccHHHHHHHHH
Confidence 9999888742 24455566665
No 50
>PRK13604 luxD acyl transferase; Provisional
Probab=99.95 E-value=1.6e-26 Score=168.11 Aligned_cols=200 Identities=18% Similarity=0.191 Sum_probs=127.7
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC-CCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA-GSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCA 89 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 89 (264)
..++||++||++.+...+..+++.| +||+|+.+|.||+ |.|+... ... +......|+.++++++ +.+++.
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~---~~~-t~s~g~~Dl~aaid~lk~~~~~~I~ 111 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI---DEF-TMSIGKNSLLTVVDWLNTRGINNLG 111 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc---ccC-cccccHHHHHHHHHHHHhcCCCceE
Confidence 3479999999999988899999999 9999999999987 9996532 122 2333467776666665 456899
Q ss_pred EEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC----
Q 024681 90 YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV---- 165 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 165 (264)
|+||||||.+|+..|... .++++|+.+|..... ..+.. .+...+. .+.........
T Consensus 112 LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~-----------d~l~~---~~~~~~~----~~p~~~lp~~~d~~g 171 (307)
T PRK13604 112 LIAASLSARIAYEVINEI--DLSFLITAVGVVNLR-----------DTLER---ALGYDYL----SLPIDELPEDLDFEG 171 (307)
T ss_pred EEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH-----------HHHHH---hhhcccc----cCccccccccccccc
Confidence 999999999997777643 389999998864310 00110 0000000 00000000000
Q ss_pred hHH-HHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC-CCceEEEecCCC
Q 024681 166 PAA-VREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG-GRNTVELLKIEG 243 (264)
Q Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 243 (264)
... ...+.......+... .....+.++++++|+|+|||++|.++|.+.++.+.+.++ ..+++++++|++
T Consensus 172 ~~l~~~~f~~~~~~~~~~~---------~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~ 242 (307)
T PRK13604 172 HNLGSEVFVTDCFKHGWDT---------LDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSS 242 (307)
T ss_pred ccccHHHHHHHHHhcCccc---------cccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCc
Confidence 000 011111111110000 011124456678999999999999999999999999886 238999999999
Q ss_pred Ccccc
Q 024681 244 HLPHL 248 (264)
Q Consensus 244 H~~~~ 248 (264)
|.+..
T Consensus 243 H~l~~ 247 (307)
T PRK13604 243 HDLGE 247 (307)
T ss_pred cccCc
Confidence 98763
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.95 E-value=3.4e-26 Score=169.19 Aligned_cols=229 Identities=14% Similarity=0.108 Sum_probs=137.3
Q ss_pred CCceEEEecCCCC----ChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-----C
Q 024681 16 GDRILVLAHGFGT----DQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-----G 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~----~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 84 (264)
.+++||++||++. +...|..+++.| +||+|+++|+||||.|.... + +++++.+|+.++++.+ +
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~-----~-~~~~~~~d~~~~~~~l~~~~~g 98 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN-----L-GFEGIDADIAAAIDAFREAAPH 98 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-----C-CHHHHHHHHHHHHHHHHhhCCC
Confidence 4467888887553 344567788888 79999999999999986431 2 3667778888777776 4
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
.++++++|||+||.+++.+|.. +++|+++|+++|...... ....................|.... .+..
T Consensus 99 ~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~ 167 (274)
T TIGR03100 99 LRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEA------AQAASRIRHYYLGQLLSADFWRKLL----SGEV 167 (274)
T ss_pred CCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcc------cchHHHHHHHHHHHHhChHHHHHhc----CCCc
Confidence 5789999999999999999865 468999999997522111 0001111111111111111111111 1111
Q ss_pred C-hHHHHHHHHhhccc-CchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-----HHHHHHHc--CCCce
Q 024681 165 V-PAAVREFSRTLFNM-RPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-----AEYLQRHL--GGRNT 235 (264)
Q Consensus 165 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-----~~~~~~~~--~~~~~ 235 (264)
. ....+.+....... .+....... ....+....+..+++|+++++|+.|...+.-. ...+.+.+ ++ ++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~-v~ 244 (274)
T TIGR03100 168 NLGSSLRGLGDALLKARQKGDEVAHG--GLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPG-IE 244 (274)
T ss_pred cHHHHHHHHHHHHHhhhhcCCCcccc--hHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCC-eE
Confidence 1 11122222211101 000000000 01223344566779999999999998864221 14555555 56 89
Q ss_pred EEEecCCCCcccccC-hhcHHHHHHHHhcC
Q 024681 236 VELLKIEGHLPHLSA-PAIVGPVIRRALSR 264 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~ 264 (264)
++.+++++|++..+. ++++.+.|.+||++
T Consensus 245 ~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 245 RVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 999999999985554 59999999999975
No 52
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.95 E-value=4.2e-26 Score=176.77 Aligned_cols=210 Identities=13% Similarity=0.100 Sum_probs=135.2
Q ss_pred CCceEEEecCCCCCh-hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEE
Q 024681 16 GDRILVLAHGFGTDQ-SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCA 89 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~-~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 89 (264)
..|+||+.||+++.. ..|..+.+.| +||+|+++|+||+|.|...... . +......++.+.+... +.+++.
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~---~-d~~~~~~avld~l~~~~~vd~~ri~ 268 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT---Q-DSSLLHQAVLNALPNVPWVDHTRVA 268 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc---c-cHHHHHHHHHHHHHhCcccCcccEE
Confidence 346777766766653 5688888888 8999999999999999643111 1 2344445555555544 557999
Q ss_pred EEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC-CCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHH
Q 024681 90 YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND-EDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAA 168 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
++|||+||.+++.+|..+|++++++|+++++...... ...... ...+. ... +...+. ........
T Consensus 269 l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~-----~p~~~---~~~---la~~lg---~~~~~~~~ 334 (414)
T PRK05077 269 AFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ-----VPEMY---LDV---LASRLG---MHDASDEA 334 (414)
T ss_pred EEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh-----chHHH---HHH---HHHHhC---CCCCChHH
Confidence 9999999999999999999999999999886431100 000000 00000 000 000000 00111111
Q ss_pred HHHHHHhhcccCchhhhhhhhhhcCCccccc-cCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccc
Q 024681 169 VREFSRTLFNMRPDISLFVSKTVFDTDLRGI-LGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 247 (264)
.. ..+ ..+.. ..... ..++++|+|+|+|++|.++|.+.++.+.+..++ .+++++|++ ++
T Consensus 335 l~---~~l------------~~~sl-~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l~~i~~~---~~ 394 (414)
T PRK05077 335 LR---VEL------------NRYSL-KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD-GKLLEIPFK---PV 394 (414)
T ss_pred HH---HHh------------hhccc-hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC-CeEEEccCC---Cc
Confidence 11 110 00000 00011 156899999999999999999999999999988 899999976 45
Q ss_pred ccChhcHHHHHHHHhc
Q 024681 248 LSAPAIVGPVIRRALS 263 (264)
Q Consensus 248 ~~~~~~~~~~i~~fl~ 263 (264)
.+.++++.+.+.+||+
T Consensus 395 ~e~~~~~~~~i~~wL~ 410 (414)
T PRK05077 395 YRNFDKALQEISDWLE 410 (414)
T ss_pred cCCHHHHHHHHHHHHH
Confidence 6799999999999986
No 53
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.94 E-value=2e-25 Score=175.44 Aligned_cols=246 Identities=16% Similarity=0.199 Sum_probs=155.2
Q ss_pred cceeeEEEEeCC--CCceEEEecCCCCChhhHH-----Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH
Q 024681 4 LLEALHVRVVGT--GDRILVLAHGFGTDQSAWQ-----RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 4 ~~~~~~~~~~g~--~~p~vv~~hG~~~~~~~~~-----~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
.++-++|....+ .++|||++||+......|+ .+++.| +||+|+++|++|+|.|.... ....|. .+.+.+
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~-~~ddY~-~~~i~~ 250 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK-TFDDYI-RDGVIA 250 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC-ChhhhH-HHHHHH
Confidence 456677766543 4579999999988877774 688888 89999999999999885431 234454 566777
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHH----HHHHhC-CCccceeEEecCCCCCCCCCCCCCCccHHHH---HHHHH---
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGL----LASIRR-PDLFTKLILIGASPRFLNDEDYHGGFEEAEI---DKVFR--- 143 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 143 (264)
.+..+++.++.++++++||||||.++. .+++.. +++|++++++++...+..............+ .....
T Consensus 251 al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G 330 (532)
T TIGR01838 251 ALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGG 330 (532)
T ss_pred HHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcC
Confidence 788888888999999999999999852 245555 7889999999998766543222111111111 11111
Q ss_pred ------------HHHhhhhhhhhhcccccCCCCChH-HHHHHHHhhcccCchhhhhhhhhhcC-----------Cccccc
Q 024681 144 ------------AMEANYEAWAYGYAPLAVGADVPA-AVREFSRTLFNMRPDISLFVSKTVFD-----------TDLRGI 199 (264)
Q Consensus 144 ------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 199 (264)
.+...-..|............... .+..+..............+++.+.. .+....
T Consensus 331 ~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~d 410 (532)
T TIGR01838 331 YLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLD 410 (532)
T ss_pred CCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecc
Confidence 111100001111111111111100 11111111222222223333322221 233456
Q ss_pred cCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChh
Q 024681 200 LGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPA 252 (264)
Q Consensus 200 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 252 (264)
+.+|++|+++++|++|.++|.+.++.+.+.+++ .+..+++++||..++++|.
T Consensus 411 L~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~-~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 411 LSKVKVPVYIIATREDHIAPWQSAYRGAALLGG-PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred hhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCC-CEEEEECCCCCchHhhCCC
Confidence 788999999999999999999999999999998 7888999999999988874
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.94 E-value=6.2e-27 Score=170.05 Aligned_cols=215 Identities=24% Similarity=0.303 Sum_probs=134.6
Q ss_pred ceEEEecCCCCCCCCC-CCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 43 HRVIMFDLVCAGSVNP-DYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 43 ~~v~~~d~~g~G~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
|+|+++|+||+|.|++ .......|+ .+++++++..+++.++.++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYT-TDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHC-HHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCccccc-HHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999985 012456665 99999999999999999999999999999999999999999999999999852
Q ss_pred C---CCCCCCCCCCccHHHHH-HHHHHHHhhhhhhhhhccc--ccCCCC-ChHH-HHHHHHhhccc-Cchhhh----hhh
Q 024681 122 R---FLNDEDYHGGFEEAEID-KVFRAMEANYEAWAYGYAP--LAVGAD-VPAA-VREFSRTLFNM-RPDISL----FVS 188 (264)
Q Consensus 122 ~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~-~~~~~~~~~~~-~~~~~~----~~~ 188 (264)
. ......+.......... ................... ...... .... ........... ...... ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNAL 159 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccc
Confidence 0 00000000000000000 0000000000000000000 000000 0000 00000000000 000000 011
Q ss_pred hhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHH
Q 024681 189 KTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 189 ~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
......+....+.++++|+++++|++|.++|++....+.+.+++ .++++++++||+.+.++|+++.+.|.
T Consensus 160 ~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 160 GYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 12223344456778999999999999999999999999999999 89999999999999999999998875
No 55
>PRK10566 esterase; Provisional
Probab=99.93 E-value=2.5e-24 Score=158.01 Aligned_cols=212 Identities=20% Similarity=0.178 Sum_probs=128.3
Q ss_pred eEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCC--Ccc-cchHHHHHHHHHHH
Q 024681 8 LHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFD--FRR-YTTLDAYVDDLLNI 79 (264)
Q Consensus 8 ~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~--~~~-~~~~~~~~~~~~~~ 79 (264)
++|...+. ..|+||++||++++...|..++..| +||+|+++|+||+|.+...... ... +.......+|+.++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 44445432 2479999999999998999999999 7999999999999986322100 000 11112223444444
Q ss_pred HHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 80 LDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 80 ~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
++.+ +.++++++|||+||.+++.++.++|+....++++++. .+ .......
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~-------- 150 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSG-YF---------------TSLARTL-------- 150 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcH-HH---------------HHHHHHh--------
Confidence 4432 3468999999999999999999888643344444331 00 0000000
Q ss_pred hhcccccCC-CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCc-ccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 154 YGYAPLAVG-ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV-RVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 154 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
+...... ........... ......+....+.++ ++|+|+++|++|.++|++.++.+.+.++
T Consensus 151 --~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~ 213 (249)
T PRK10566 151 --FPPLIPETAAQQAEFNNIV---------------APLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALR 213 (249)
T ss_pred --cccccccccccHHHHHHHH---------------HHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHH
Confidence 0000000 00000111111 111111222334555 6899999999999999999999998775
Q ss_pred CC-----ceEEEecCCCCcccccChhcHHHHHHHHhcC
Q 024681 232 GR-----NTVELLKIEGHLPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 232 ~~-----~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 264 (264)
.. +++..++++||.+. + +..+.+.+||++
T Consensus 214 ~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 214 ERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred hcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 42 46778899999864 3 356777888763
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.93 E-value=2.5e-24 Score=149.87 Aligned_cols=182 Identities=12% Similarity=-0.007 Sum_probs=123.8
Q ss_pred ceEEEecCCCCChhhHHH--hhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 18 RILVLAHGFGTDQSAWQR--ILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~--~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
|+||++||++++...|.. +...+ .+|+|+++|+||++ ++.++++.++++.++.++++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 689999999999998874 34444 38999999999873 3477788899999988999999
Q ss_pred ecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 92 GHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
||||||.+++.+|.++|. .+|+++|+... ...+. ...... ... ...........
T Consensus 67 G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~-----------~~~~~---~~~~~~--------~~~-~~~~~~~~~~~ 120 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML---PAVVVNPAVRP-----------FELLT---DYLGEN--------ENP-YTGQQYVLESR 120 (190)
T ss_pred EECHHHHHHHHHHHHcCC---CEEEECCCCCH-----------HHHHH---HhcCCc--------ccc-cCCCcEEEcHH
Confidence 999999999999999983 46888875320 00000 000000 000 00000000011
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccCh
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAP 251 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 251 (264)
+.. .....+... +. ..+|+++++|++|.++|.+.+.++++. ++..+++|++|.+ +..
T Consensus 121 ~~~---------------d~~~~~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~ 177 (190)
T PRK11071 121 HIY---------------DLKVMQIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF--VGF 177 (190)
T ss_pred HHH---------------HHHhcCCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch--hhH
Confidence 111 111112112 22 577899999999999999999999984 4566889999987 444
Q ss_pred hcHHHHHHHHhc
Q 024681 252 AIVGPVIRRALS 263 (264)
Q Consensus 252 ~~~~~~i~~fl~ 263 (264)
+++.+.+.+|++
T Consensus 178 ~~~~~~i~~fl~ 189 (190)
T PRK11071 178 ERYFNQIVDFLG 189 (190)
T ss_pred HHhHHHHHHHhc
Confidence 889999999975
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.93 E-value=1.1e-24 Score=166.96 Aligned_cols=240 Identities=16% Similarity=0.177 Sum_probs=141.8
Q ss_pred CceEEEecCCCCChhhH-----HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH-----HHHHHHHHhC
Q 024681 17 DRILVLAHGFGTDQSAW-----QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD-----DLLNILDTLG 84 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~-----~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 84 (264)
+++||++||+..+...+ +.+++.| +||+|+++|++|+|.|... + ++++++. .+..+.+..+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~------~-~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY------L-TLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc------C-CHHHHHHHHHHHHHHHHHHHhC
Confidence 45799999986655444 5788888 8999999999999987532 1 2444443 3444555567
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCcc-HHHHHHHHHHHHhhhhh------------
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFE-EAEIDKVFRAMEANYEA------------ 151 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------ 151 (264)
.++++++||||||.+++.++..+|++++++|+++++..+........... .................
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~ 214 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPF 214 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcc
Confidence 78999999999999999999999999999999998765433221110000 00000000000000000
Q ss_pred --hhhhcccccCCCCChHHHHHHH---Hhhcc---cCchhhhhhhhhhcC-----------CccccccCCcccCEEEEec
Q 024681 152 --WAYGYAPLAVGADVPAAVREFS---RTLFN---MRPDISLFVSKTVFD-----------TDLRGILGLVRVPCVIIQT 212 (264)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~P~l~i~g 212 (264)
....+.........++....+. ..... ........+...+.. ......++++++|+++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G 294 (350)
T TIGR01836 215 SLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYA 294 (350)
T ss_pred hhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEec
Confidence 0000000000001111111111 11111 111111111111110 0112346678999999999
Q ss_pred CCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCcccccC---hhcHHHHHHHHhcC
Q 024681 213 SKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPHLSA---PAIVGPVIRRALSR 264 (264)
Q Consensus 213 ~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 264 (264)
++|.++|++..+.+.+.+++. .++++++ +||...+.. ++++.+.|.+||.+
T Consensus 295 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 295 ERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999999998753 5667777 899766554 47899999999864
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=7.4e-23 Score=151.89 Aligned_cols=251 Identities=28% Similarity=0.416 Sum_probs=151.9
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.+.|...+...|+++++||++++...|......+ ..|+++.+|+||||.|. . . .+ +....++++..+++.
T Consensus 11 ~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~---~-~~-~~~~~~~~~~~~~~~ 84 (282)
T COG0596 11 RLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-P---A-GY-SLSAYADDLAALLDA 84 (282)
T ss_pred EEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-c---c-cc-cHHHHHHHHHHHHHH
Confidence 4556666655669999999999999888843333 12999999999999997 1 1 22 255559999999999
Q ss_pred hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCC----CCccHHHHHHHHHHH-Hhhhhhhhhhc-
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYH----GGFEEAEIDKVFRAM-EANYEAWAYGY- 156 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~- 156 (264)
++..+++++|||+||.+++.++.++|++++++|++++........... ............... ...........
T Consensus 85 ~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T COG0596 85 LGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALG 164 (282)
T ss_pred hCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccc
Confidence 998889999999999999999999999999999999865411100000 000001110000000 00000000000
Q ss_pred -ccccC-------CCCC-hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHH
Q 024681 157 -APLAV-------GADV-PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227 (264)
Q Consensus 157 -~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 227 (264)
..... .... ....................................++++|+++++|++|.+.|......+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~ 244 (282)
T COG0596 165 LLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLA 244 (282)
T ss_pred ccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHH
Confidence 00000 0000 00000000000000000000000011111233456677899999999999777766666677
Q ss_pred HHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 228 RHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 228 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.++...++.+++++||+.+.++|+.+.+.+.+|++
T Consensus 245 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 245 AALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred hhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 777632689999999999999999999999888553
No 59
>PLN02872 triacylglycerol lipase
Probab=99.92 E-value=3.4e-23 Score=158.72 Aligned_cols=245 Identities=14% Similarity=0.076 Sum_probs=142.0
Q ss_pred CceEEEecCCCCChhhHH------Hhhhhc--CCceEEEecCCCCCCCCC----C--CCCCcccchHHHHH-HHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQ------RILPYL--NHHRVIMFDLVCAGSVNP----D--YFDFRRYTTLDAYV-DDLLNILD 81 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~------~~~~~l--~g~~v~~~d~~g~G~s~~----~--~~~~~~~~~~~~~~-~~~~~~~~ 81 (264)
+|+|+++||++.++..|. .++..| +||+|+++|+||++.|.. . .....+++ +++++ .|+.++++
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s-~~e~a~~Dl~a~id 152 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWS-WQELALYDLAEMIH 152 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCc-HHHHHHHHHHHHHH
Confidence 579999999998888873 344456 799999999999886632 1 11112454 88888 79999999
Q ss_pred Hh---CCCeEEEEecChhHHHHHHHHHhCCC---ccceeEEecCCCCCCCCCCCCC-CccHHHHHHHHHHHHh-------
Q 024681 82 TL---GVNRCAYVGHSVSAMIGLLASIRRPD---LFTKLILIGASPRFLNDEDYHG-GFEEAEIDKVFRAMEA------- 147 (264)
Q Consensus 82 ~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------- 147 (264)
++ ..++++++|||+||.+++.++ .+|+ +|+.+++++|............ .........+...+..
T Consensus 153 ~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (395)
T PLN02872 153 YVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRS 231 (395)
T ss_pred HHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCc
Confidence 86 347999999999999998555 5776 6888899888653321111000 0000000000000000
Q ss_pred -hhhhhhhhccc----------ccCCC---CChHHHHHHHHhh-cccCchhhhhhhhhh-----cC--------------
Q 024681 148 -NYEAWAYGYAP----------LAVGA---DVPAAVREFSRTL-FNMRPDISLFVSKTV-----FD-------------- 193 (264)
Q Consensus 148 -~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~-------------- 193 (264)
........+.. ...+. ........+.... ...+......+.+.. ..
T Consensus 232 ~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~ 311 (395)
T PLN02872 232 DVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQ 311 (395)
T ss_pred HHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCC
Confidence 00000000000 00000 0000111111000 000000000000000 00
Q ss_pred -CccccccCCc--ccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCc---ccccChhcHHHHHHHHhc
Q 024681 194 -TDLRGILGLV--RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHL---PHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 194 -~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~---~~~~~~~~~~~~i~~fl~ 263 (264)
....-.++++ ++|+++++|++|.+++++..+++.+.+++..+++.+++++|. ...+.|+++.+.|.+||+
T Consensus 312 ~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~ 387 (395)
T PLN02872 312 VNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFR 387 (395)
T ss_pred CCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHH
Confidence 0111135566 589999999999999999999999999874588889999995 455889999999999986
No 60
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=3.2e-23 Score=144.09 Aligned_cols=198 Identities=18% Similarity=0.184 Sum_probs=139.4
Q ss_pred CCcceeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 2 GDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
|+.+..++++......+++++.||...+......+...| -+++++++|++|+|.|...+... ...+|+.+
T Consensus 45 gn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-------n~y~Di~a 117 (258)
T KOG1552|consen 45 GNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-------NLYADIKA 117 (258)
T ss_pred CCEEEEEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-------cchhhHHH
Confidence 556667777666665689999999977766555555566 38999999999999997653222 23344444
Q ss_pred HHHHh----C-CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhh
Q 024681 79 ILDTL----G-VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWA 153 (264)
Q Consensus 79 ~~~~~----~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (264)
+.+.+ | .++++|+|+|+|+..++.+|.+.| +.++||.+|.... +..+......
T Consensus 118 vye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~------------------~rv~~~~~~~-- 175 (258)
T KOG1552|consen 118 VYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG------------------MRVAFPDTKT-- 175 (258)
T ss_pred HHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhh------------------hhhhccCcce--
Confidence 43333 2 579999999999999999999998 9999999984221 0000000000
Q ss_pred hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC
Q 024681 154 YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR 233 (264)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 233 (264)
. .+ +..+...+..+.+++|+|++||++|.+++.....++.+..+++
T Consensus 176 ------------------------------~-~~---~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~ 221 (258)
T KOG1552|consen 176 ------------------------------T-YC---FDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK 221 (258)
T ss_pred ------------------------------E-Ee---eccccccCcceeccCCEEEEecccCceecccccHHHHHhcccc
Confidence 0 00 0001113456778999999999999999999999999999986
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+-.++.|+||.-..-.| ++.+.+.+|+.
T Consensus 222 ~epl~v~g~gH~~~~~~~-~yi~~l~~f~~ 250 (258)
T KOG1552|consen 222 VEPLWVKGAGHNDIELYP-EYIEHLRRFIS 250 (258)
T ss_pred CCCcEEecCCCcccccCH-HHHHHHHHHHH
Confidence 688899999998765444 46677777764
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.91 E-value=4.1e-23 Score=139.10 Aligned_cols=143 Identities=22% Similarity=0.379 Sum_probs=114.1
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
+||++||++++...|..+++.| .||.|+.+|+|++|.+... ...+++.+++. .+..+.++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-------DAVERVLADIR--AGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-------HHHHHHHHHHH--HHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-------HHHHHHHHHHH--hhcCCCCcEEEEEEccC
Confidence 6899999999999999999999 9999999999999988321 02444444443 12236689999999999
Q ss_pred HHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhh
Q 024681 97 AMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTL 176 (264)
Q Consensus 97 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (264)
|.+++.++.+. .+++++|++++.+.
T Consensus 72 g~~a~~~~~~~-~~v~~~v~~~~~~~------------------------------------------------------ 96 (145)
T PF12695_consen 72 GAIAANLAARN-PRVKAVVLLSPYPD------------------------------------------------------ 96 (145)
T ss_dssp HHHHHHHHHHS-TTESEEEEESESSG------------------------------------------------------
T ss_pred cHHHHHHhhhc-cceeEEEEecCccc------------------------------------------------------
Confidence 99999999988 68999999997200
Q ss_pred cccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCc
Q 024681 177 FNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHL 245 (264)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 245 (264)
...+...+.|+++++|++|..++.+..+.+.+.++...+++++++++|+
T Consensus 97 --------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 --------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred --------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0112344669999999999999999999999999855899999999995
No 62
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=1.8e-21 Score=134.57 Aligned_cols=224 Identities=16% Similarity=0.100 Sum_probs=152.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH-HhCCCeEEEEec
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD-TLGVNRCAYVGH 93 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~ 93 (264)
.++.++++|-.|+++..|+.+...| ..+.++++++||+|..-.. ...++++++++.+...+. ....+++.++||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~e----p~~~di~~Lad~la~el~~~~~d~P~alfGH 81 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGE----PLLTDIESLADELANELLPPLLDAPFALFGH 81 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCC----cccccHHHHHHHHHHHhccccCCCCeeeccc
Confidence 3468999999999999999999999 8899999999999987432 222369999999988887 454579999999
Q ss_pred ChhHHHHHHHHHhCC---CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHH
Q 024681 94 SVSAMIGLLASIRRP---DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVR 170 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
||||++|..+|.+.. -.+.++.+.+..+................+...+..+......... +++.+.
T Consensus 82 SmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~le----------d~El~~ 151 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLE----------DPELMA 151 (244)
T ss_pred chhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhc----------CHHHHH
Confidence 999999999998642 2366677766654422222222333333333333333222111110 011111
Q ss_pred HHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccC
Q 024681 171 EFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA 250 (264)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 250 (264)
.+.. ...+-+.....+..... ..+++|+.++.|++|..++.+....+.+..++..++.+++ +||+...++
T Consensus 152 l~LP--------ilRAD~~~~e~Y~~~~~-~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~ 221 (244)
T COG3208 152 LFLP--------ILRADFRALESYRYPPP-APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQ 221 (244)
T ss_pred HHHH--------HHHHHHHHhcccccCCC-CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-Ccceehhhh
Confidence 1111 11111111112222222 5679999999999999999999999999988668999999 899999999
Q ss_pred hhcHHHHHHHHhc
Q 024681 251 PAIVGPVIRRALS 263 (264)
Q Consensus 251 ~~~~~~~i~~fl~ 263 (264)
.+++.+.|.+.+.
T Consensus 222 ~~~v~~~i~~~l~ 234 (244)
T COG3208 222 REEVLARLEQHLA 234 (244)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988874
No 63
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.90 E-value=1.4e-21 Score=167.53 Aligned_cols=253 Identities=14% Similarity=0.076 Sum_probs=148.7
Q ss_pred cceeeEEEEeCC------CCceEEEecCCCCChhhHHHh-----hhhc--CCceEEEecCCCCCCCCCCCCCCcccchHH
Q 024681 4 LLEALHVRVVGT------GDRILVLAHGFGTDQSAWQRI-----LPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLD 70 (264)
Q Consensus 4 ~~~~~~~~~~g~------~~p~vv~~hG~~~~~~~~~~~-----~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 70 (264)
.+.-++|....+ .+|+||++||++.+...|+.. .+.| +||+|+++|+ |.++..... ..+ ++.
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~-~~~-~l~ 122 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGG-MER-NLA 122 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcC-ccC-CHH
Confidence 345566754432 447999999999999999865 6777 7999999994 665542111 112 466
Q ss_pred HHHHHHHHHHHH---hCCCeEEEEecChhHHHHHHHHHhC-CCccceeEEecCCCCCCCCCCC--CC-------CccH--
Q 024681 71 AYVDDLLNILDT---LGVNRCAYVGHSVSAMIGLLASIRR-PDLFTKLILIGASPRFLNDEDY--HG-------GFEE-- 135 (264)
Q Consensus 71 ~~~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~~--~~-------~~~~-- 135 (264)
+++..+.+.++. +..++++++||||||.+++.+++.+ +++|+++|+++++..+...... .. .+..
T Consensus 123 ~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 202 (994)
T PRK07868 123 DHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADH 202 (994)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhh
Confidence 776666666654 3447899999999999999988755 5689999998887544221100 00 0000
Q ss_pred --------HHHH-HHHHHHH-----hhhhhhhhhcccccCCCCChHHHHHHHHhh--cccCchhhhhhhhhhcC------
Q 024681 136 --------AEID-KVFRAME-----ANYEAWAYGYAPLAVGADVPAAVREFSRTL--FNMRPDISLFVSKTVFD------ 193 (264)
Q Consensus 136 --------~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------ 193 (264)
.... ..+..+. .....+...+...... ...+..+.+.... ..........+...+..
T Consensus 203 ~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~-~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~ 281 (994)
T PRK07868 203 VFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREAL-LPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMT 281 (994)
T ss_pred hhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhh-ccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccC
Confidence 0000 0000000 0000011111100000 0001111211111 01111122222222211
Q ss_pred -----CccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceE-EEecCCCCcccc---cChhcHHHHHHHHhc
Q 024681 194 -----TDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTV-ELLKIEGHLPHL---SAPAIVGPVIRRALS 263 (264)
Q Consensus 194 -----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~ 263 (264)
......++++++|+|+|+|++|.++|++..+.+.+.+++ .++ .+++++||+.++ ..++++...|.+||+
T Consensus 282 g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~-a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~ 359 (994)
T PRK07868 282 GGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPN-AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVK 359 (994)
T ss_pred ceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHH
Confidence 011135789999999999999999999999999999998 776 678899997655 346888899999986
No 64
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=4.8e-21 Score=140.14 Aligned_cols=258 Identities=21% Similarity=0.338 Sum_probs=173.3
Q ss_pred eeEEEEeCC----CCceEEEecCCCCChh-----------hHHHhhh---hc--CCceEEEecCCCCC-CC-CCCCCCCc
Q 024681 7 ALHVRVVGT----GDRILVLAHGFGTDQS-----------AWQRILP---YL--NHHRVIMFDLVCAG-SV-NPDYFDFR 64 (264)
Q Consensus 7 ~~~~~~~g~----~~p~vv~~hG~~~~~~-----------~~~~~~~---~l--~g~~v~~~d~~g~G-~s-~~~~~~~~ 64 (264)
.+.|+.+|. ....|+++|++.++.. .|..++. .+ ..|-||+.|..|.+ .| .+....+.
T Consensus 37 ~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~ 116 (368)
T COG2021 37 RVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG 116 (368)
T ss_pred EEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC
Confidence 578888886 2358999999988543 3454442 34 78999999999875 33 33322222
Q ss_pred --------ccchHHHHHHHHHHHHHHhCCCeEE-EEecChhHHHHHHHHHhCCCccceeEEecCCCCCC-----------
Q 024681 65 --------RYTTLDAYVDDLLNILDTLGVNRCA-YVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFL----------- 124 (264)
Q Consensus 65 --------~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~----------- 124 (264)
.-.++.|++..-..+++++|++++. +||.||||+.|+.++..+|++|.++|.+++++...
T Consensus 117 g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r 196 (368)
T COG2021 117 GKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQR 196 (368)
T ss_pred CCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHH
Confidence 2125889999889999999999987 89999999999999999999999999999865421
Q ss_pred ----CCCCCCCC-----ccHH-HH--HHHHHHHH-hhhhhhhhhcccccCCC-----CChHHHHHHH-----HhhcccCc
Q 024681 125 ----NDEDYHGG-----FEEA-EI--DKVFRAME-ANYEAWAYGYAPLAVGA-----DVPAAVREFS-----RTLFNMRP 181 (264)
Q Consensus 125 ----~~~~~~~~-----~~~~-~~--~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-----~~~~~~~~ 181 (264)
.++.+..+ .... .+ .+++..+. .....+...+....... .....++.+. +.....++
T Consensus 197 ~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDa 276 (368)
T COG2021 197 QAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDA 276 (368)
T ss_pred HHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCc
Confidence 12222111 1111 11 11111111 22233444443322111 1111333333 33445667
Q ss_pred hhhhhhhhhhcCCccc-------cccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec-CCCCcccccChhc
Q 024681 182 DISLFVSKTVFDTDLR-------GILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK-IEGHLPHLSAPAI 253 (264)
Q Consensus 182 ~~~~~~~~~~~~~~~~-------~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~ 253 (264)
..+....+.+...|.. ..++++++|++++.-+.|...|++..+.+.+.++....+++++ ..||..++...+.
T Consensus 277 NsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~ 356 (368)
T COG2021 277 NSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEA 356 (368)
T ss_pred chHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhh
Confidence 7766666666554443 4488999999999999999999999999999999843265554 5899988888888
Q ss_pred HHHHHHHHhcC
Q 024681 254 VGPVIRRALSR 264 (264)
Q Consensus 254 ~~~~i~~fl~~ 264 (264)
+...|.+||+.
T Consensus 357 ~~~~i~~fL~~ 367 (368)
T COG2021 357 VGPLIRKFLAL 367 (368)
T ss_pred hhHHHHHHhhc
Confidence 99999999863
No 65
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.89 E-value=7e-22 Score=138.02 Aligned_cols=101 Identities=22% Similarity=0.324 Sum_probs=84.8
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEE
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCA 89 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 89 (264)
..|.+++.||.|.+.-.|..++..| -..+|+++|+||||++...+ ..+. +.+.+++|+.++++++ ...+++
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~--e~dl-S~eT~~KD~~~~i~~~fge~~~~ii 149 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVEN--EDDL-SLETMSKDFGAVIKELFGELPPQII 149 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCC--hhhc-CHHHHHHHHHHHHHHHhccCCCceE
Confidence 4589999999999999999999999 57788999999999996542 2334 5999999999999988 245899
Q ss_pred EEecChhHHHHHHHHHh--CCCccceeEEecCC
Q 024681 90 YVGHSVSAMIGLLASIR--RPDLFTKLILIGAS 120 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~ 120 (264)
||||||||.+|.+.|.. -|. +.+++.++..
T Consensus 150 lVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 150 LVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred EEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 99999999999887764 454 8899999864
No 66
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.88 E-value=7.3e-22 Score=140.95 Aligned_cols=253 Identities=15% Similarity=0.180 Sum_probs=150.4
Q ss_pred eeeEEEEeCC-C--CceEEEecCCCCChhh-HHHhh-----hhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 6 EALHVRVVGT-G--DRILVLAHGFGTDQSA-WQRIL-----PYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 6 ~~~~~~~~g~-~--~p~vv~~hG~~~~~~~-~~~~~-----~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
+.+++...|+ . +|++|-.|..|.+... |..+. +.+ +.|.++=+|.||+..-.+.-.....|-++++++++
T Consensus 9 G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~ 88 (283)
T PF03096_consen 9 GSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEM 88 (283)
T ss_dssp EEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCT
T ss_pred eEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHH
Confidence 5677888886 3 7999999999988765 76654 355 99999999999998765543333457789999999
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH--HHhhhh-hh
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA--MEANYE-AW 152 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~ 152 (264)
+.+++++++++.++-+|-..||.+..++|..+|++|.++||+++.+.... |............+.. +..... ..
T Consensus 89 l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g---w~Ew~~~K~~~~~L~~~gmt~~~~d~L 165 (283)
T PF03096_consen 89 LPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG---WMEWFYQKLSSWLLYSYGMTSSVKDYL 165 (283)
T ss_dssp HHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S------HHHHHHHHHH-------CTTS-HHHHH
T ss_pred HHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc---HHHHHHHHHhcccccccccccchHHhh
Confidence 99999999999999999999999999999999999999999998654211 1000000000000000 000000 00
Q ss_pred hhhcccccCCCCChHHHHHHHHhhcc-cCchhhhhhhhhhc-CCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 153 AYGYAPLAVGADVPAAVREFSRTLFN-MRPDISLFVSKTVF-DTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
..............+.++.+.+.+.. .++.....++..+. +.|.....+...+|+|++.|+..+.. +.+..+..++
T Consensus 166 l~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~L 243 (283)
T PF03096_consen 166 LWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKL 243 (283)
T ss_dssp HHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS
T ss_pred hhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhc
Confidence 11111111111133466666666654 45566666665553 55666666777899999999998876 4556676666
Q ss_pred CC-CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 231 GG-RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 231 ~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.. ..++..++++|=.+..|+|+.+++.+.-||+
T Consensus 244 dp~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 244 DPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp -CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred CcccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 43 3789999999999999999999999999985
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.88 E-value=7e-21 Score=137.12 Aligned_cols=176 Identities=18% Similarity=0.228 Sum_probs=118.2
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCC----CCC------CcccchHHHHHHHHHHHHH-
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPD----YFD------FRRYTTLDAYVDDLLNILD- 81 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~----~~~------~~~~~~~~~~~~~~~~~~~- 81 (264)
+..|+||++||++++...|..+.+.| .++.+..++.+|...+... .++ .....++.+..+.+.+.++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999 4555555555554322110 000 0001112233333333333
Q ss_pred ---HhCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 82 ---TLGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 82 ---~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
..+. ++++++|+|+||.+++.++.++|+.+.+++.+++.... .
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~----------------------------~---- 141 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS----------------------------L---- 141 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc----------------------------c----
Confidence 3333 58999999999999999999999888878777642100 0
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR--- 233 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--- 233 (264)
. .......|+++++|++|.++|.+.++.+.+.+...
T Consensus 142 ---------~--------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~ 180 (232)
T PRK11460 142 ---------P--------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGD 180 (232)
T ss_pred ---------c--------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCC
Confidence 0 00012679999999999999999998888877532
Q ss_pred ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+++..++++||.+..+..+.+.+.+.++|.
T Consensus 181 ~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 181 VTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred eEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 678889999999876666666677666653
No 68
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.87 E-value=1.1e-19 Score=128.35 Aligned_cols=231 Identities=15% Similarity=0.172 Sum_probs=145.9
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC-eEEEEecC
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN-RCAYVGHS 94 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 94 (264)
.+||-+||.+++..+|+.+.+.| .|++++.+++||+|.+... +...|+ -.+...-+.++++.++++ +++.+|||
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~--~~~~~~-n~er~~~~~~ll~~l~i~~~~i~~gHS 112 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGY--PDQQYT-NEERQNFVNALLDELGIKGKLIFLGHS 112 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCC--cccccC-hHHHHHHHHHHHHHcCCCCceEEEEec
Confidence 38999999999999999999999 9999999999999999764 234565 788899999999999885 78899999
Q ss_pred hhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC--ChHHHHHH
Q 024681 95 VSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD--VPAAVREF 172 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 172 (264)
.|+-.|+.+|..+| ..++++++|+..-... ..........+..+...+........-.......+-. ..+.....
T Consensus 113 rGcenal~la~~~~--~~g~~lin~~G~r~Hk-gIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na 189 (297)
T PF06342_consen 113 RGCENALQLAVTHP--LHGLVLINPPGLRPHK-GIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAINA 189 (297)
T ss_pred cchHHHHHHHhcCc--cceEEEecCCcccccc-CcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHHH
Confidence 99999999999996 6799999986432221 1111111112222222111111000000000000000 00111111
Q ss_pred HHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC--------------------
Q 024681 173 SRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG-------------------- 232 (264)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-------------------- 232 (264)
.+.+..++.... ....+.+.+-++|+++++|.+|..+..+...+++..+.+
T Consensus 190 ~r~m~~~df~~q---------~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~ 260 (297)
T PF06342_consen 190 MRSMQNCDFEEQ---------KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILK 260 (297)
T ss_pred HHHHHhcCHHHH---------HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHH
Confidence 111111111111 112233445568999999999999876665555443321
Q ss_pred ------CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 233 ------RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 233 ------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
....+.+.+.||+.+-.+++-+++.+...|+
T Consensus 261 ~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 261 SFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 1234567779999999999999998887663
No 69
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.87 E-value=1.3e-19 Score=127.68 Aligned_cols=253 Identities=17% Similarity=0.180 Sum_probs=170.2
Q ss_pred eeeEEEEeCC---CCceEEEecCCCCChhh-HHHhhh-----hc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH
Q 024681 6 EALHVRVVGT---GDRILVLAHGFGTDQSA-WQRILP-----YL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 6 ~~~~~~~~g~---~~p~vv~~hG~~~~~~~-~~~~~~-----~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
+.+++...|+ ++|++|-.|..+.+... |..+.. .+ ..|.|+-+|.||+-.-.+.-.....|-++++++++
T Consensus 32 G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~ 111 (326)
T KOG2931|consen 32 GVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADM 111 (326)
T ss_pred ccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHH
Confidence 3466777775 36899999999988765 766543 45 67999999999997665433233356689999999
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHH--HHhhh-hhh
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRA--MEANY-EAW 152 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~ 152 (264)
+..++++++.+.++-+|--.|+.+..++|..+|++|.++||+++.+.... |..+........++.. +.... .-.
T Consensus 112 l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g---wiew~~~K~~s~~l~~~Gmt~~~~d~l 188 (326)
T KOG2931|consen 112 LPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG---WIEWAYNKVSSNLLYYYGMTQGVKDYL 188 (326)
T ss_pred HHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch---HHHHHHHHHHHHHHHhhchhhhHHHHH
Confidence 99999999999999999999999999999999999999999998654221 1111111111111111 11111 111
Q ss_pred hhhcccccCCCCChHHHHHHHHhhccc-Cchhhhhhhhhhc-CCccccccC----CcccCEEEEecCCCCCcchhhHHHH
Q 024681 153 AYGYAPLAVGADVPAAVREFSRTLFNM-RPDISLFVSKTVF-DTDLRGILG----LVRVPCVIIQTSKDVSVPVSVAEYL 226 (264)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~----~i~~P~l~i~g~~D~~~~~~~~~~~ 226 (264)
+.............+.++++.+.+... ++.....++..+. +.|...... .++||+|++.|++.+.+ +....+
T Consensus 189 l~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~ 266 (326)
T KOG2931|consen 189 LAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVEC 266 (326)
T ss_pred HHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchh--hhhhhh
Confidence 122222222222455666766666543 3455555555443 233332222 45699999999998876 344555
Q ss_pred HHHcCC-CceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 227 QRHLGG-RNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 227 ~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
..++.. ...+..+.++|-.+..++|..+++.+.-|++
T Consensus 267 n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 267 NSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred hcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 555543 2778888999999999999999999999885
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.86 E-value=1.3e-20 Score=136.76 Aligned_cols=100 Identities=15% Similarity=0.183 Sum_probs=82.2
Q ss_pred CceEEEecCCCCC----hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hCCCe
Q 024681 17 DRILVLAHGFGTD----QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LGVNR 87 (264)
Q Consensus 17 ~p~vv~~hG~~~~----~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 87 (264)
+|+||++||++.. ...|..+++.| .||+|+++|+||||.|.... ..+ +++.+.+|+..+++. .+.++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~---~~~-~~~~~~~Dv~~ai~~L~~~~~~~ 100 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF---AAA-RWDVWKEDVAAAYRWLIEQGHPP 100 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc---ccC-CHHHHHHHHHHHHHHHHhcCCCC
Confidence 4789999999864 34567778888 89999999999999996532 223 377788887765544 46689
Q ss_pred EEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
++++||||||.+++.+|.++|++++++|+++|.
T Consensus 101 v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred EEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 999999999999999999999999999999985
No 71
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.85 E-value=9.9e-20 Score=122.50 Aligned_cols=200 Identities=19% Similarity=0.248 Sum_probs=128.6
Q ss_pred ceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-Ce--EEE
Q 024681 18 RILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NR--CAY 90 (264)
Q Consensus 18 p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~l 90 (264)
..+|++||+-++.. ....++.+| .|+.++.+|++|.|+|... ..+..| ...++|+..+++++.. .+ -++
T Consensus 34 e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs-f~~Gn~---~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 34 EIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS-FYYGNY---NTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred eEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc-cccCcc---cchHHHHHHHHHHhccCceEEEEE
Confidence 48999999998763 456678888 8999999999999999764 233444 4456999999999843 33 368
Q ss_pred EecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHH-HHHHhhhhhhhhhcccccCCCCChHHH
Q 024681 91 VGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVF-RAMEANYEAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
+|||-||-+++.+|.++++ +.-+|-+++-... . ... ..+......|...-.-....+....
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl--~-------------~~I~eRlg~~~l~~ike~Gfid~~~rkG~-- 171 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL--K-------------NGINERLGEDYLERIKEQGFIDVGPRKGK-- 171 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccch--h-------------cchhhhhcccHHHHHHhCCceecCcccCC--
Confidence 9999999999999999987 7777766653211 0 001 1111222222111000000000000
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccccccCCc--ccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccc
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLV--RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPH 247 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 247 (264)
................+..+...+| +||||-+||..|.++|.+.+.++++.+++ .++.++||+.|...
T Consensus 172 ---------y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIEgADHnyt 241 (269)
T KOG4667|consen 172 ---------YGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIEGADHNYT 241 (269)
T ss_pred ---------cCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-CceEEecCCCcCcc
Confidence 0000000001111122333333334 69999999999999999999999999999 89999999999765
Q ss_pred cc
Q 024681 248 LS 249 (264)
Q Consensus 248 ~~ 249 (264)
..
T Consensus 242 ~~ 243 (269)
T KOG4667|consen 242 GH 243 (269)
T ss_pred ch
Confidence 43
No 72
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.85 E-value=8.8e-21 Score=127.72 Aligned_cols=196 Identities=14% Similarity=0.074 Sum_probs=134.4
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh------CC
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL------GV 85 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 85 (264)
+..|+++++|+..++....-..+..+ -+.+|+.+++||+|.|...+.. +.+.-|-.++++++ +.
T Consensus 76 ~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE-------~GL~lDs~avldyl~t~~~~dk 148 (300)
T KOG4391|consen 76 SSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE-------EGLKLDSEAVLDYLMTRPDLDK 148 (300)
T ss_pred CCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc-------cceeccHHHHHHHHhcCccCCc
Confidence 36689999999999988877777766 6889999999999999765322 22333444455544 34
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
.++++.|.|.||.+|+.+|+++.+++.++|+-+.....+.... .-+..........+
T Consensus 149 tkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i----------~~v~p~~~k~i~~l------------- 205 (300)
T KOG4391|consen 149 TKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAI----------PLVFPFPMKYIPLL------------- 205 (300)
T ss_pred ceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhh----------heeccchhhHHHHH-------------
Confidence 6899999999999999999999999999999987533211000 00000000000000
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCC
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGH 244 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH 244 (264)
..+.. ......+...+.|.|++.|..|.++|+...+.+++..+.. +++..+|++.|
T Consensus 206 ------c~kn~-----------------~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtH 262 (300)
T KOG4391|consen 206 ------CYKNK-----------------WLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTH 262 (300)
T ss_pred ------HHHhh-----------------hcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCcc
Confidence 00000 0001223455889999999999999999999999999875 78999999999
Q ss_pred cccccChhcHHHHHHHHhcC
Q 024681 245 LPHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 245 ~~~~~~~~~~~~~i~~fl~~ 264 (264)
.-.+- -+-..+.|.+||.+
T Consensus 263 NDT~i-~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 263 NDTWI-CDGYFQAIEDFLAE 281 (300)
T ss_pred CceEE-eccHHHHHHHHHHH
Confidence 54332 24567888888753
No 73
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.85 E-value=5.2e-20 Score=150.19 Aligned_cols=220 Identities=17% Similarity=0.161 Sum_probs=136.1
Q ss_pred CCcceeeEEEEeCCCC----ceEEEecCCCCChhh--HHHhhhhc--CCceEEEecCCCCCCC-----CCCCCCCcccch
Q 024681 2 GDLLEALHVRVVGTGD----RILVLAHGFGTDQSA--WQRILPYL--NHHRVIMFDLVCAGSV-----NPDYFDFRRYTT 68 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~----p~vv~~hG~~~~~~~--~~~~~~~l--~g~~v~~~d~~g~G~s-----~~~~~~~~~~~~ 68 (264)
|..+..+.+...+.++ |+||++||.+..... |....+.| +||.|+.+|.||.+.- .....+... ..
T Consensus 375 G~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~-~~ 453 (620)
T COG1506 375 GETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGG-VD 453 (620)
T ss_pred CCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCC-cc
Confidence 4555666666655432 899999998765544 55666666 9999999999976442 111111111 23
Q ss_pred HHHHHHHHHHHHHHhC---CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHH
Q 024681 69 LDAYVDDLLNILDTLG---VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAM 145 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (264)
.+++.+.+. ++...+ .+++.++|||+||.+++..+.+.| .+++.+...+........
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~------------------ 513 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYF------------------ 513 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhc------------------
Confidence 666666666 444443 248999999999999999999888 677777776643211000
Q ss_pred HhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHH
Q 024681 146 EANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEY 225 (264)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 225 (264)
......+.... ... ...... -...+...+......++++|+|+|||++|..+|.+.+.+
T Consensus 514 ~~~~~~~~~~~----------------~~~-~~~~~~----~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~ 572 (620)
T COG1506 514 GESTEGLRFDP----------------EEN-GGGPPE----DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQ 572 (620)
T ss_pred cccchhhcCCH----------------HHh-CCCccc----ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHH
Confidence 00000000000 000 000000 000011112223467889999999999999999999999
Q ss_pred HHHHcCCC---ceEEEecCCCCcccc-cChhcHHHHHHHHhc
Q 024681 226 LQRHLGGR---NTVELLKIEGHLPHL-SAPAIVGPVIRRALS 263 (264)
Q Consensus 226 ~~~~~~~~---~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 263 (264)
+.+.+... ++++++|+.+|.+.. ++...+.+.+.+|++
T Consensus 573 ~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~ 614 (620)
T COG1506 573 LVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFK 614 (620)
T ss_pred HHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHH
Confidence 98887542 899999999997665 445566677777764
No 74
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.84 E-value=7.6e-19 Score=137.22 Aligned_cols=236 Identities=16% Similarity=0.179 Sum_probs=143.5
Q ss_pred CcceeeEEEEeCC--CCceEEEecCCCCChhhH-----HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHH
Q 024681 3 DLLEALHVRVVGT--GDRILVLAHGFGTDQSAW-----QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYV 73 (264)
Q Consensus 3 ~~~~~~~~~~~g~--~~p~vv~~hG~~~~~~~~-----~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 73 (264)
+.++-++|....+ -++|||+++.+-.....+ +.+++.| +||+|+.+|+++-+.+.. .. ++++++
T Consensus 199 ~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r------~~-~ldDYv 271 (560)
T TIGR01839 199 EVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR------EW-GLSTYV 271 (560)
T ss_pred CceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc------CC-CHHHHH
Confidence 3456777765443 346999999988666655 4678888 999999999998665532 12 477777
Q ss_pred HHHHHHHHHh----CCCeEEEEecChhHHHHHH----HHHhCCC-ccceeEEecCCCCCCCCCCCCCCccHHHHH-----
Q 024681 74 DDLLNILDTL----GVNRCAYVGHSVSAMIGLL----ASIRRPD-LFTKLILIGASPRFLNDEDYHGGFEEAEID----- 139 (264)
Q Consensus 74 ~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~----~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~----- 139 (264)
+.+.+.++.+ +.+++.++|+|+||.++.. +++++++ +|++++++.+...+..............+.
T Consensus 272 ~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~ 351 (560)
T TIGR01839 272 DALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRR 351 (560)
T ss_pred HHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHH
Confidence 7666666655 6789999999999999986 7888886 799999999877664332222111111111
Q ss_pred -------------HHHHHHHhhhhhhhhhcccccCCCCChH-HHHHHHHhhcccCchhhhhhhhhhcCCc----------
Q 024681 140 -------------KVFRAMEANYEAWAYGYAPLAVGADVPA-AVREFSRTLFNMRPDISLFVSKTVFDTD---------- 195 (264)
Q Consensus 140 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 195 (264)
..+..+...-.-|............... .+..+..............+...+....
T Consensus 352 ~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~ 431 (560)
T TIGR01839 352 SYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVC 431 (560)
T ss_pred HHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEEC
Confidence 1111111110011111111111111110 1222222223333333333332111111
Q ss_pred -cccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcc
Q 024681 196 -LRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLP 246 (264)
Q Consensus 196 -~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 246 (264)
..-.+++|++|++++.|+.|.++|++.+..+.+.+...++++..+ +||..
T Consensus 432 G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIg 482 (560)
T TIGR01839 432 GTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQ 482 (560)
T ss_pred CEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCccc
Confidence 123578899999999999999999999999999998756666665 89953
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.84 E-value=2.1e-18 Score=128.01 Aligned_cols=187 Identities=16% Similarity=0.170 Sum_probs=112.5
Q ss_pred CCceEEEecCCCCChhhHHHh---hhhc--CCceEEEecCCCCCCC-----CC------C-----CC-------CCcccc
Q 024681 16 GDRILVLAHGFGTDQSAWQRI---LPYL--NHHRVIMFDLVCAGSV-----NP------D-----YF-------DFRRYT 67 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~---~~~l--~g~~v~~~d~~g~G~s-----~~------~-----~~-------~~~~~~ 67 (264)
+.|+|+++||++++...|... ...+ .|+.|+++|..++|.. .. . .. ....|.
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 458999999999988777543 3445 6999999998776621 00 0 00 000111
Q ss_pred hHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh
Q 024681 68 TLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA 147 (264)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
.+++...+....+.++.++++++||||||..|+.++.++|+++++++.+++........ .....+
T Consensus 126 -~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~--------- 190 (283)
T PLN02442 126 -VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP-----WGQKAF--------- 190 (283)
T ss_pred -HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc-----hhhHHH---------
Confidence 33344444455555677899999999999999999999999999999998853311000 000000
Q ss_pred hhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHH
Q 024681 148 NYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYL 226 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~ 226 (264)
..+ +... ... +.+ .........+...++|+++++|++|.+++.. .++.+
T Consensus 191 --~~~--------~g~~-~~~---~~~----------------~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~ 240 (283)
T PLN02442 191 --TNY--------LGSD-KAD---WEE----------------YDATELVSKFNDVSATILIDQGEADKFLKEQLLPENF 240 (283)
T ss_pred --HHH--------cCCC-hhh---HHH----------------cChhhhhhhccccCCCEEEEECCCCccccccccHHHH
Confidence 000 0000 000 000 0011111223456789999999999998853 23444
Q ss_pred HHHc---CCCceEEEecCCCCccc
Q 024681 227 QRHL---GGRNTVELLKIEGHLPH 247 (264)
Q Consensus 227 ~~~~---~~~~~~~~~~~~gH~~~ 247 (264)
.+.+ ...+++.++++.+|..+
T Consensus 241 ~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 241 EEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHHHHHcCCCeEEEEeCCCCccHH
Confidence 4333 22278999999999655
No 76
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.83 E-value=5.1e-20 Score=131.82 Aligned_cols=191 Identities=19% Similarity=0.156 Sum_probs=110.5
Q ss_pred HHHhhhhc--CCceEEEecCCCCCCCCCC----CCCCcccchHHHHHHHHHHHHHHh--CCCeEEEEecChhHHHHHHHH
Q 024681 33 WQRILPYL--NHHRVIMFDLVCAGSVNPD----YFDFRRYTTLDAYVDDLLNILDTL--GVNRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 33 ~~~~~~~l--~g~~v~~~d~~g~G~s~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a 104 (264)
|......| +||.|+.+|+||.+..... .........++|..+.+..+++.- +.+++.++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44455666 8999999999998754211 000011112334444444443332 346899999999999999999
Q ss_pred HhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhh
Q 024681 105 IRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDIS 184 (264)
Q Consensus 105 ~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (264)
.++|++++++|..++............. +... .... ... ............
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~-----~~~~---------~~~~-~~~---~~~~~~~~~~~s----------- 133 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI-----YTKA---------EYLE-YGD---PWDNPEFYRELS----------- 133 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC-----HHHG---------HHHH-HSS---TTTSHHHHHHHH-----------
T ss_pred cccceeeeeeeccceecchhcccccccc-----cccc---------cccc-cCc---cchhhhhhhhhc-----------
Confidence 9999999999999986443221110000 0000 0000 000 000000000000
Q ss_pred hhhhhhhcCCccccccCC--cccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecCCCCccc-ccChhcHHHHH
Q 024681 185 LFVSKTVFDTDLRGILGL--VRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKIEGHLPH-LSAPAIVGPVI 258 (264)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~-~~~~~~~~~~i 258 (264)
....+.+ +++|+|+++|++|..+|.+.+..+.+.+... +++.++|++||.+. .+...+..+.+
T Consensus 134 -----------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~ 202 (213)
T PF00326_consen 134 -----------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERI 202 (213)
T ss_dssp -----------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHH
T ss_pred -----------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHH
Confidence 0011222 6899999999999999999988888776432 89999999999544 34445777777
Q ss_pred HHHhc
Q 024681 259 RRALS 263 (264)
Q Consensus 259 ~~fl~ 263 (264)
.+||+
T Consensus 203 ~~f~~ 207 (213)
T PF00326_consen 203 LDFFD 207 (213)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 78775
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.83 E-value=3.4e-18 Score=126.73 Aligned_cols=106 Identities=16% Similarity=0.182 Sum_probs=76.9
Q ss_pred CCceEEEecCCCCChhhHHHh--hhhc---CCceEEEecC--CCCCCCCCC----------------C-CCCcccchHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRI--LPYL---NHHRVIMFDL--VCAGSVNPD----------------Y-FDFRRYTTLDA 71 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~--~~~l---~g~~v~~~d~--~g~G~s~~~----------------~-~~~~~~~~~~~ 71 (264)
..|+|+++||++++...|... ...+ .|+.|+++|. +|+|.+... . .....+.....
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 358999999999988877543 2344 5899999998 555533210 0 00012332334
Q ss_pred HHHHHHHHHHH---hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 72 YVDDLLNILDT---LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 72 ~~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+++++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++..
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 46788887776 355789999999999999999999999999999998864
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.82 E-value=5.2e-19 Score=127.54 Aligned_cols=237 Identities=18% Similarity=0.172 Sum_probs=130.6
Q ss_pred CCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCe
Q 024681 16 GDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNR 87 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 87 (264)
..|.||++||+.++. ..-+.+++.+ +||.|++++.|||+.+... .+.-|++- ..+|+..+++.+ ...+
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~--~p~~yh~G--~t~D~~~~l~~l~~~~~~r~ 149 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANT--SPRLYHSG--ETEDIRFFLDWLKARFPPRP 149 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCccc--Ccceeccc--chhHHHHHHHHHHHhCCCCc
Confidence 458999999976654 3345677788 9999999999999988542 23344322 225666555554 4579
Q ss_pred EEEEecChhH-HHHHHHHHhCCC-ccceeEEecCCCCCC-----CCCCCC-CCccHHHHHHHHHHHHhhhhhhhhhcccc
Q 024681 88 CAYVGHSVSA-MIGLLASIRRPD-LFTKLILIGASPRFL-----NDEDYH-GGFEEAEIDKVFRAMEANYEAWAYGYAPL 159 (264)
Q Consensus 88 ~~l~G~S~Gg-~~a~~~a~~~p~-~v~~~vl~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
+..+|.|+|| +++..++.+-.+ .+.+.+.++.+.... ....+. ..+.......+...+....... ..
T Consensus 150 ~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l-----~~ 224 (345)
T COG0429 150 LYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKEL-----EP 224 (345)
T ss_pred eEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhc-----Cc
Confidence 9999999999 555555544222 344554444432210 011111 1111111111111222211111 00
Q ss_pred cCCCCChHHHHHHHHhhcccCc------hhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHH-HcCC
Q 024681 160 AVGADVPAAVREFSRTLFNMRP------DISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQR-HLGG 232 (264)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~ 232 (264)
.......+..+ -.+.+...+. .............+....+++|.+|+|+|++.+|++++++....... ..|+
T Consensus 225 ~~p~~~~~~ik-~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~ 303 (345)
T COG0429 225 SLPGTVLAAIK-RCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPN 303 (345)
T ss_pred ccCcHHHHHHH-hhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCc
Confidence 00000001111 0111111111 11222223333455567889999999999999999999887777666 5555
Q ss_pred CceEEEecCCCCccccc----Chh-cHHHHHHHHhc
Q 024681 233 RNTVELLKIEGHLPHLS----APA-IVGPVIRRALS 263 (264)
Q Consensus 233 ~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~ 263 (264)
+.+..-+.+||..++. +|. -..+.+.+||+
T Consensus 304 -v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~ 338 (345)
T COG0429 304 -VLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338 (345)
T ss_pred -eEEEeecCCceEEeccCccccchhhHHHHHHHHHH
Confidence 8888899999987776 332 33455555553
No 79
>PLN00021 chlorophyllase
Probab=99.82 E-value=1.5e-18 Score=129.50 Aligned_cols=172 Identities=16% Similarity=0.155 Sum_probs=112.5
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-------hCCC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT-------LGVN 86 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 86 (264)
..|+||++||++.+...|..+++.| .||.|+++|++|++.+.. .....+..+..+.+.+.++. .+.+
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~----~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~ 126 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG----TDEIKDAAAVINWLSSGLAAVLPEGVRPDLS 126 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc----hhhHHHHHHHHHHHHhhhhhhcccccccChh
Confidence 4489999999999999999999999 799999999998754321 11111223333333332222 2346
Q ss_pred eEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
+++++|||+||.+++.+|.++++ +++++|+++|.........
T Consensus 127 ~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~--------------------------------- 173 (313)
T PLN00021 127 KLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ--------------------------------- 173 (313)
T ss_pred heEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC---------------------------------
Confidence 89999999999999999998874 5789999988532110000
Q ss_pred CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCC---------Ccchhh-HHHHHHHcC
Q 024681 162 GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDV---------SVPVSV-AEYLQRHLG 231 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~---------~~~~~~-~~~~~~~~~ 231 (264)
..+... .......++.+|++++.+..|. ..|... ...+.+..+
T Consensus 174 -----------------~~p~il----------~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~ 226 (313)
T PLN00021 174 -----------------TPPPVL----------TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECK 226 (313)
T ss_pred -----------------CCCccc----------ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcC
Confidence 000000 0001122368999999998763 233333 367777776
Q ss_pred CCceEEEecCCCCcccccCh
Q 024681 232 GRNTVELLKIEGHLPHLSAP 251 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~ 251 (264)
..+.+.+++++||+-++|..
T Consensus 227 ~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 227 APAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred CCeeeeeecCCCcceeecCC
Confidence 55888899999998776544
No 80
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.80 E-value=9.9e-18 Score=119.95 Aligned_cols=179 Identities=20% Similarity=0.227 Sum_probs=107.5
Q ss_pred eCCCCceEEEecCCCCChhhHHHhhh-hc--CCceEEEecCCC------CCC---CCC--CCCCC---cccchHHHHHHH
Q 024681 13 VGTGDRILVLAHGFGTDQSAWQRILP-YL--NHHRVIMFDLVC------AGS---VNP--DYFDF---RRYTTLDAYVDD 75 (264)
Q Consensus 13 ~g~~~p~vv~~hG~~~~~~~~~~~~~-~l--~g~~v~~~d~~g------~G~---s~~--~~~~~---~~~~~~~~~~~~ 75 (264)
.++..|+||++||+|.+...+..+.. .+ .+..++.++-|. .|. +-- ...+. .....+...++.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 44567899999999999988877666 23 677777776542 232 110 00011 112234555555
Q ss_pred HHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhh
Q 024681 76 LLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYE 150 (264)
Q Consensus 76 ~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
+.++++.. ..++++++|+|+||.+|+.++.++|+.+.++|.+++.......
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~------------------------ 145 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE------------------------ 145 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC------------------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc------------------------
Confidence 55665543 3358999999999999999999999999999999974221000
Q ss_pred hhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 151 AWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
+ .+...... ++|++++||.+|+++|.+..+...+.+
T Consensus 146 -~-----------------------------------------~~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L 181 (216)
T PF02230_consen 146 -L-----------------------------------------EDRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFL 181 (216)
T ss_dssp -C-----------------------------------------HCCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHH
T ss_pred -c-----------------------------------------cccccccC--CCcEEEEecCCCCcccHHHHHHHHHHH
Confidence 0 00000111 679999999999999998888877776
Q ss_pred CCC---ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 231 GGR---NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 231 ~~~---~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+. +++..+++.||.+..+ ..+.+.+||+
T Consensus 182 ~~~~~~v~~~~~~g~gH~i~~~----~~~~~~~~l~ 213 (216)
T PF02230_consen 182 KAAGANVEFHEYPGGGHEISPE----ELRDLREFLE 213 (216)
T ss_dssp HCTT-GEEEEEETT-SSS--HH----HHHHHHHHHH
T ss_pred HhcCCCEEEEEcCCCCCCCCHH----HHHHHHHHHh
Confidence 443 7899999999987633 3444555554
No 81
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.79 E-value=4.2e-18 Score=128.26 Aligned_cols=194 Identities=12% Similarity=0.144 Sum_probs=105.1
Q ss_pred CceEEEecCCCCChhhHH-Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hCCCeEEE
Q 024681 17 DRILVLAHGFGTDQSAWQ-RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LGVNRCAY 90 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~-~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 90 (264)
.|+||++.|+-+-...+. .+.+.| +|+.++++|.||.|.|.....+.+ + +..-..+...+.. ++.++|.+
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D-~---~~l~~aVLd~L~~~p~VD~~RV~~ 265 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQD-S---SRLHQAVLDYLASRPWVDHTRVGA 265 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S--C---CHHHHHHHHHHHHSTTEEEEEEEE
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcC-H---HHHHHHHHHHHhcCCccChhheEE
Confidence 477888888888776654 455667 999999999999999864333322 2 2233333333333 34569999
Q ss_pred EecChhHHHHHHHHHhCCCccceeEEecCCCCCCC-CCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHH
Q 024681 91 VGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLN-DEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
+|.|+||.+|.++|..++++++++|..+++....- ........+.. ..
T Consensus 266 ~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~m-------------------------------y~ 314 (411)
T PF06500_consen 266 WGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDM-------------------------------YL 314 (411)
T ss_dssp EEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HH-------------------------------HH
T ss_pred EEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHH-------------------------------HH
Confidence 99999999999999999899999999998643211 10000000000 11
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccc--ccc--CCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCC-C
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLR--GIL--GLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG-H 244 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H 244 (264)
+.+...+. ........+...+...+.. ..+ .+.++|+|.+.|++|+++|.+..+-++..-.+ .+...++... |
T Consensus 315 d~LA~rlG-~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~-gk~~~~~~~~~~ 392 (411)
T PF06500_consen 315 DVLASRLG-MAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTD-GKALRIPSKPLH 392 (411)
T ss_dssp HHHHHHCT--SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE-SSSHH
T ss_pred HHHHHHhC-CccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCC-CceeecCCCccc
Confidence 11111111 0111111111111222221 233 56789999999999999999999999888776 6777777544 4
Q ss_pred ccc
Q 024681 245 LPH 247 (264)
Q Consensus 245 ~~~ 247 (264)
..+
T Consensus 393 ~gy 395 (411)
T PF06500_consen 393 MGY 395 (411)
T ss_dssp HHH
T ss_pred cch
Confidence 443
No 82
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.79 E-value=5.4e-17 Score=121.45 Aligned_cols=226 Identities=16% Similarity=0.144 Sum_probs=126.2
Q ss_pred CCceEEEecCCCCCh-hhH-HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCe
Q 024681 16 GDRILVLAHGFGTDQ-SAW-QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNR 87 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~-~~~-~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 87 (264)
..|+||++||+.+++ +.| +.++..+ +||+|++++.||+|.|.-.. +.-|+ ....+|+.++++++ -..+
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT--pr~f~--ag~t~Dl~~~v~~i~~~~P~a~ 199 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT--PRLFT--AGWTEDLREVVNHIKKRYPQAP 199 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC--Cceee--cCCHHHHHHHHHHHHHhCCCCc
Confidence 458999999976654 333 4555555 99999999999999996542 23332 23445555555554 4468
Q ss_pred EEEEecChhHHHHHHHHHhCCC---ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPD---LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGAD 164 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
...+|.||||.+.+.+..+..+ .+.++++++|.-.......+...........+ +...............+...
T Consensus 200 l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~---l~~~l~~~~~~~r~~~~~~~ 276 (409)
T KOG1838|consen 200 LFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRA---LTLNLKRIVLRHRHTLFEDP 276 (409)
T ss_pred eEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHH---HHHhHHHHHhhhhhhhhhcc
Confidence 9999999999999999887543 34555555553211111111111111111111 11112211111111111100
Q ss_pred C-------hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhH-HHHHHHcCCCceE
Q 024681 165 V-------PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVA-EYLQRHLGGRNTV 236 (264)
Q Consensus 165 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~ 236 (264)
. ...++++-+.+... ..........+...+....+.+|++|+|+|++.+|+++|.+.. .......|+ +-+
T Consensus 277 vd~d~~~~~~SvreFD~~~t~~-~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~-v~l 354 (409)
T KOG1838|consen 277 VDFDVILKSRSVREFDEALTRP-MFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPN-VLL 354 (409)
T ss_pred chhhhhhhcCcHHHHHhhhhhh-hcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCc-EEE
Confidence 0 01222222222110 0111112222334556677899999999999999999998543 344555566 667
Q ss_pred EEecCCCCcccccC
Q 024681 237 ELLKIEGHLPHLSA 250 (264)
Q Consensus 237 ~~~~~~gH~~~~~~ 250 (264)
.+-..+||..++|.
T Consensus 355 ~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 355 VITSHGGHLGFLEG 368 (409)
T ss_pred EEeCCCceeeeecc
Confidence 77778999888776
No 83
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.78 E-value=2.5e-17 Score=125.26 Aligned_cols=255 Identities=18% Similarity=0.187 Sum_probs=155.6
Q ss_pred ceeeEEEEeCCC----CceEEEecCCCCChhhH-HHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 5 LEALHVRVVGTG----DRILVLAHGFGTDQSAW-QRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 5 ~~~~~~~~~g~~----~p~vv~~hG~~~~~~~~-~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
..-++|....+. +|+||++..+.++.... +.+.+.| .|+.|+..|+..-+..+.. ...+ +++++++.+.+
T Consensus 86 ~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~---~~~f-~ldDYi~~l~~ 161 (406)
T TIGR01849 86 CRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLS---AGKF-DLEDYIDYLIE 161 (406)
T ss_pred eEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchh---cCCC-CHHHHHHHHHH
Confidence 455677555332 37999999988766544 5677888 9999999999877654321 1333 49999999999
Q ss_pred HHHHhCCCeEEEEecChhHHHHHHHHHhC-----CCccceeEEecCCCCCCCCCCCCCCccH-HHHHHHHHHH-------
Q 024681 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRR-----PDLFTKLILIGASPRFLNDEDYHGGFEE-AEIDKVFRAM------- 145 (264)
Q Consensus 79 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------- 145 (264)
+++.+|.+ ++++|+|+||..++.+++.. |++++++++++++..+...+.....+.. ..+..+....
T Consensus 162 ~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~ 240 (406)
T TIGR01849 162 FIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFP 240 (406)
T ss_pred HHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCcc
Confidence 99999877 99999999999977666554 6679999999997665432111111100 0000011000
Q ss_pred -------------------Hhh----hhhhhhhcccccCCCCCh-HHHHHHH---HhhcccCchhhhhhhhhhcCCcc--
Q 024681 146 -------------------EAN----YEAWAYGYAPLAVGADVP-AAVREFS---RTLFNMRPDISLFVSKTVFDTDL-- 196 (264)
Q Consensus 146 -------------------~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-- 196 (264)
..+ ...+...+.....+.... .....+. ...............+.++..+.
T Consensus 241 ~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~ 320 (406)
T TIGR01849 241 YPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLP 320 (406)
T ss_pred ccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCcc
Confidence 000 011111111111111111 1111111 22223333444444433332221
Q ss_pred ---------ccccCCcc-cCEEEEecCCCCCcchhhHHHHHHHc---CCC-ceEEEecCCCCccccc---ChhcHHHHHH
Q 024681 197 ---------RGILGLVR-VPCVIIQTSKDVSVPVSVAEYLQRHL---GGR-NTVELLKIEGHLPHLS---APAIVGPVIR 259 (264)
Q Consensus 197 ---------~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~-~~~~~~~~~gH~~~~~---~~~~~~~~i~ 259 (264)
.-.+++|+ +|++.+.|++|.++|+..++.+.+.+ +.. ++....+++||..... ..+++...|.
T Consensus 321 ~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~ 400 (406)
T TIGR01849 321 QGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVR 400 (406)
T ss_pred CCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHH
Confidence 23467888 99999999999999999999988874 532 4567777899975553 3478899999
Q ss_pred HHhcC
Q 024681 260 RALSR 264 (264)
Q Consensus 260 ~fl~~ 264 (264)
+||.+
T Consensus 401 ~wl~~ 405 (406)
T TIGR01849 401 EFIRR 405 (406)
T ss_pred HHHHh
Confidence 99864
No 84
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.78 E-value=2.6e-17 Score=122.95 Aligned_cols=225 Identities=16% Similarity=0.084 Sum_probs=128.1
Q ss_pred cceeeEEEEe-CCC-CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCC----------------CCC-C
Q 024681 4 LLEALHVRVV-GTG-DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPD----------------YFD-F 63 (264)
Q Consensus 4 ~~~~~~~~~~-g~~-~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~----------------~~~-~ 63 (264)
.+....+... +++ -|.||.+||.++....+......- .||.|+.+|.||+|..... ..+ +
T Consensus 68 ~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~ 147 (320)
T PF05448_consen 68 RVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNP 147 (320)
T ss_dssp EEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-T
T ss_pred EEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCch
Confidence 3444445555 333 379999999999987787766666 9999999999999932210 001 2
Q ss_pred cccchHHHHHHHHHHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHH
Q 024681 64 RRYTTLDAYVDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAE 137 (264)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 137 (264)
+.+. +..+..|....++.+ +.+++.+.|.|+||.+++.+|+..| +|++++...|....
T Consensus 148 e~~y-yr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d-------------- 211 (320)
T PF05448_consen 148 EDYY-YRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD-------------- 211 (320)
T ss_dssp TT-H-HHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS--------------
T ss_pred HHHH-HHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc--------------
Confidence 2232 444556666555554 2358999999999999999999886 69999998874321
Q ss_pred HHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCC
Q 024681 138 IDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVS 217 (264)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 217 (264)
+...+.... ....-.....+.+... ..+.........+...|.....++|++|+++-.|-.|.+
T Consensus 212 ~~~~~~~~~---------------~~~~y~~~~~~~~~~d-~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~ 275 (320)
T PF05448_consen 212 FRRALELRA---------------DEGPYPEIRRYFRWRD-PHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPV 275 (320)
T ss_dssp HHHHHHHT-----------------STTTHHHHHHHHHHS-CTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SS
T ss_pred hhhhhhcCC---------------ccccHHHHHHHHhccC-CCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCC
Confidence 000000000 0000001111211111 112233334444455677777888999999999999999
Q ss_pred cchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 218 VPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+|++.....++.++..+++.++|..||-...+. -.+...+||.
T Consensus 276 cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~~---~~~~~~~~l~ 318 (320)
T PF05448_consen 276 CPPSTQFAAYNAIPGPKELVVYPEYGHEYGPEF---QEDKQLNFLK 318 (320)
T ss_dssp S-HHHHHHHHCC--SSEEEEEETT--SSTTHHH---HHHHHHHHHH
T ss_pred CCchhHHHHHhccCCCeeEEeccCcCCCchhhH---HHHHHHHHHh
Confidence 999999999999987789999999999554332 1455555553
No 85
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.78 E-value=4.8e-17 Score=117.98 Aligned_cols=219 Identities=14% Similarity=0.129 Sum_probs=132.8
Q ss_pred ceEEEecCCCCChhhHHHhhhhc-CC-ceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC-eEEEEecC
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL-NH-HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN-RCAYVGHS 94 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l-~g-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 94 (264)
++|+|+|+.+++...|..+++.| .. +.|+.++.+|.+...+ ...+++++++...+.+.....+ ++.|+|||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~------~~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP------PPDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH------EESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC------CCCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 47999999999999999999999 75 9999999999983322 2236999999999888887665 99999999
Q ss_pred hhHHHHHHHHHhC---CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 95 VSAMIGLLASIRR---PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 95 ~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
+||.+|+.+|.+. ...+..++++++.+......... ...........+...... .... .........
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~ 144 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRS---REPSDEQFIEELRRIGGT-PDAS------LEDEELLAR 144 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHH---HHCHHHHHHHHHHHHCHH-HHHH------CHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhh---hhhhHHHHHHHHHHhcCC-chhh------hcCHHHHHH
Confidence 9999999999763 34689999999754321100000 000000011111100000 0000 000001111
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh---hHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS---VAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
....+. .......... ......-.+|.++.....|...... ....+.+...+..+++.++ ++|+.++
T Consensus 145 ~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l 214 (229)
T PF00975_consen 145 LLRALR--------DDFQALENYS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSML 214 (229)
T ss_dssp HHHHHH--------HHHHHHHTCS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHH
T ss_pred HHHHHH--------HHHHHHhhcc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEec
Confidence 111110 0000000110 0001111567888888888887655 3444777777657788888 7998887
Q ss_pred c-ChhcHHHHHHHHh
Q 024681 249 S-APAIVGPVIRRAL 262 (264)
Q Consensus 249 ~-~~~~~~~~i~~fl 262 (264)
+ +..++++.|.++|
T Consensus 215 ~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 215 KPHVAEIAEKIAEWL 229 (229)
T ss_dssp STTHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhccC
Confidence 6 6688999988876
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.78 E-value=2.7e-17 Score=118.09 Aligned_cols=178 Identities=16% Similarity=0.080 Sum_probs=112.9
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCc--ccc-----hHHHHHHHHHHHHHHhC--
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR--RYT-----TLDAYVDDLLNILDTLG-- 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~-- 84 (264)
..|.||++|++.+-....+.++..| +||.|+++|+-+-....+...... .+. ..+...+++.+.++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 4589999999888778888899999 999999999865443111110000 010 02345667766666652
Q ss_pred ----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc
Q 024681 85 ----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA 160 (264)
Q Consensus 85 ----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
.+++.++|+|+||.+++.+|.+. +.+++.|..-|....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------------- 134 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------------- 134 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------------------
Confidence 25899999999999999999887 578998887761000
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc---CCCceEE
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL---GGRNTVE 237 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~ 237 (264)
........++++|+++++|++|+.++.+..+.+.+.+ ....+++
T Consensus 135 ---------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (218)
T PF01738_consen 135 ---------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVH 181 (218)
T ss_dssp ---------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEE
T ss_pred ---------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 0001123456899999999999999999888877776 2228999
Q ss_pred EecCCCCcccccCh--------hcHHHHHHHHhcC
Q 024681 238 LLKIEGHLPHLSAP--------AIVGPVIRRALSR 264 (264)
Q Consensus 238 ~~~~~gH~~~~~~~--------~~~~~~i~~fl~~ 264 (264)
+++|++|.+..... ++-.+.+.+||++
T Consensus 182 ~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 182 VYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp EETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred ECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999996655432 3456667777764
No 87
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.76 E-value=1.4e-16 Score=113.71 Aligned_cols=106 Identities=15% Similarity=0.125 Sum_probs=72.6
Q ss_pred CCceEEEecCCCCChhhHH---Hhhhhc--CCceEEEecCCCCCCCCCCC--CCCc----ccchHHHHHHHHHHHHHHhC
Q 024681 16 GDRILVLAHGFGTDQSAWQ---RILPYL--NHHRVIMFDLVCAGSVNPDY--FDFR----RYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~---~~~~~l--~g~~v~~~d~~g~G~s~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~ 84 (264)
..|+||++||.+++...+. .+...+ .||.|+++|.+|++.+.... .... ......++.+-+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4689999999999887775 344445 69999999999987543210 0000 00012222222223333333
Q ss_pred --CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.++++|+|||+||.+++.++.++|+.+.+++.+++.+
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3589999999999999999999999999999888754
No 88
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.75 E-value=4.9e-17 Score=113.61 Aligned_cols=195 Identities=17% Similarity=0.153 Sum_probs=131.6
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCC----CCC--------------CcccchHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPD----YFD--------------FRRYTTLDAYVDDL 76 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~----~~~--------------~~~~~~~~~~~~~~ 76 (264)
..|.||-.||.+++...|..+...- .||.|+.+|.||.|.|+.. ... .+.|. ......|+
T Consensus 82 ~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yy-yr~v~~D~ 160 (321)
T COG3458 82 KLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYY-YRGVFLDA 160 (321)
T ss_pred ccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceE-EeeehHHH
Confidence 3489999999999999888888777 9999999999999988321 000 12222 22333444
Q ss_pred HHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhh
Q 024681 77 LNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYE 150 (264)
Q Consensus 77 ~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
..+++.+ ..+++.+.|.|.||.+++.+++..| +++++++.-|..... .
T Consensus 161 ~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df-------------------------~ 214 (321)
T COG3458 161 VRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDF-------------------------P 214 (321)
T ss_pred HHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccc-------------------------h
Confidence 4444433 4468999999999999999998776 799999888742210 0
Q ss_pred hhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHc
Q 024681 151 AWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHL 230 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 230 (264)
++... ........+..+.+ ...+. ....+..+...|......++++|+|+..|--|+++|+...-..++++
T Consensus 215 r~i~~-----~~~~~ydei~~y~k---~h~~~-e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l 285 (321)
T COG3458 215 RAIEL-----ATEGPYDEIQTYFK---RHDPK-EAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNAL 285 (321)
T ss_pred hheee-----cccCcHHHHHHHHH---hcCch-HHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcc
Confidence 00000 00000111222222 22222 33444445556677778889999999999999999999999999999
Q ss_pred CCCceEEEecCCCCcc
Q 024681 231 GGRNTVELLKIEGHLP 246 (264)
Q Consensus 231 ~~~~~~~~~~~~gH~~ 246 (264)
+..+++.+++--+|.-
T Consensus 286 ~~~K~i~iy~~~aHe~ 301 (321)
T COG3458 286 TTSKTIEIYPYFAHEG 301 (321)
T ss_pred cCCceEEEeecccccc
Confidence 8877888888777743
No 89
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.75 E-value=9.4e-17 Score=130.03 Aligned_cols=117 Identities=15% Similarity=0.192 Sum_probs=84.7
Q ss_pred CCcceeeEEEEeCC-CCceEEEecCCCCChh---hH-HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH
Q 024681 2 GDLLEALHVRVVGT-GDRILVLAHGFGTDQS---AW-QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 2 g~~~~~~~~~~~g~-~~p~vv~~hG~~~~~~---~~-~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
|..+....|...+. ..|+||++||++.+.. .+ ......| +||.|+++|+||+|.|.... ..+ + ...++
T Consensus 6 G~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~---~~~-~-~~~~~ 80 (550)
T TIGR00976 6 GTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEF---DLL-G-SDEAA 80 (550)
T ss_pred CCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCce---Eec-C-cccch
Confidence 33333333444443 4589999999987653 12 2233445 89999999999999997531 111 1 45677
Q ss_pred HHHHHHHHhC-----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 75 DLLNILDTLG-----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 75 ~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
|+.++++++. ..++.++|||+||.+++.+|..+|++++++|..++....
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 7777777763 258999999999999999999999999999998886543
No 90
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.74 E-value=4.7e-17 Score=125.10 Aligned_cols=104 Identities=12% Similarity=0.189 Sum_probs=80.9
Q ss_pred CCCceEEEecCCCCCh--hhHHH-hhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----
Q 024681 15 TGDRILVLAHGFGTDQ--SAWQR-ILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---- 83 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~--~~~~~-~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 83 (264)
...|++|++||++.+. ..|.. +.+.| .+|+|+++|++|+|.|.... ... .....++++.++++.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~---a~~-~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT---SAA-YTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc---ccc-cHHHHHHHHHHHHHHHHHhh
Confidence 3568999999998753 45665 55554 36999999999999885431 111 2456677777777755
Q ss_pred --CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 84 --GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 84 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+.++++|+||||||.+|..++.+.|++|.++++++|+..
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 367999999999999999999999999999999999754
No 91
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.74 E-value=4.4e-16 Score=111.77 Aligned_cols=173 Identities=18% Similarity=0.140 Sum_probs=127.3
Q ss_pred ceeeEEEEeCCCC-ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC-CCCCCCCCCCccc-------chHHHHH
Q 024681 5 LEALHVRVVGTGD-RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA-GSVNPDYFDFRRY-------TTLDAYV 73 (264)
Q Consensus 5 ~~~~~~~~~g~~~-p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~-G~s~~~~~~~~~~-------~~~~~~~ 73 (264)
+.....+..+.+. |.||++|++.+-....+.+++.| .||.|+++|+-+. |.+.......... .+..+..
T Consensus 14 ~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (236)
T COG0412 14 LPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVL 93 (236)
T ss_pred EeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHH
Confidence 3444455555544 89999999999888999999999 9999999999764 3332211011000 1236777
Q ss_pred HHHHHHHHHhC------CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHh
Q 024681 74 DDLLNILDTLG------VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEA 147 (264)
Q Consensus 74 ~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
.|+.+.++.+. .++|.++|+||||.+++.++.+.| .+++.+..-+.....
T Consensus 94 ~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~----------------------- 149 (236)
T COG0412 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD----------------------- 149 (236)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC-----------------------
Confidence 88888888773 357999999999999999999887 689988887742210
Q ss_pred hhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHH
Q 024681 148 NYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQ 227 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 227 (264)
......++++|+++..|+.|..+|....+.+.
T Consensus 150 ------------------------------------------------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~ 181 (236)
T COG0412 150 ------------------------------------------------DTADAPKIKVPVLLHLAGEDPYIPAADVDALA 181 (236)
T ss_pred ------------------------------------------------cccccccccCcEEEEecccCCCCChhHHHHHH
Confidence 00113467999999999999999998888887
Q ss_pred HHcCCC---ceEEEecCCCCccccc
Q 024681 228 RHLGGR---NTVELLKIEGHLPHLS 249 (264)
Q Consensus 228 ~~~~~~---~~~~~~~~~gH~~~~~ 249 (264)
+.+... +++.+++++.|.+..+
T Consensus 182 ~~~~~~~~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 182 AALEDAGVKVDLEIYPGAGHGFAND 206 (236)
T ss_pred HHHHhcCCCeeEEEeCCCccccccC
Confidence 776543 6789999998977644
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=99.74 E-value=2.4e-16 Score=109.55 Aligned_cols=173 Identities=20% Similarity=0.259 Sum_probs=117.4
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCC--CCC-CCCCCCCcccc------hHHHHHHHHHHHHHHhCC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCA--GSV-NPDYFDFRRYT------TLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~--G~s-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 85 (264)
..|+||++||+|++...+.++...+ .+++++.+.-+-- |.- -....+...++ ..+.+++-+..+.++.++
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 4568999999999999998877766 7777776543211 100 00001111221 233444455555556666
Q ss_pred --CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 86 --NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 86 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
++++++|+|.||.+++.+..++|+.++++|++.+.......
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~------------------------------------- 139 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE------------------------------------- 139 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc-------------------------------------
Confidence 69999999999999999999999999999999985331110
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEec
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLK 240 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~ 240 (264)
..-..-..|+++++|+.|+++|...+.++.+.+... ++...++
T Consensus 140 ----------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 140 ----------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred ----------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 000112679999999999999998888887766432 7788888
Q ss_pred CCCCcccccChhcHHHHHHH
Q 024681 241 IEGHLPHLSAPAIVGPVIRR 260 (264)
Q Consensus 241 ~~gH~~~~~~~~~~~~~i~~ 260 (264)
.||.+..+.-+...+++.+
T Consensus 186 -~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 186 -GGHEIPPEELEAARSWLAN 204 (207)
T ss_pred -CCCcCCHHHHHHHHHHHHh
Confidence 9998876555555444443
No 93
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.73 E-value=1.1e-16 Score=109.23 Aligned_cols=250 Identities=16% Similarity=0.181 Sum_probs=146.1
Q ss_pred CCcceeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHH-HHHHH
Q 024681 2 GDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYV-DDLLN 78 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~-~~~~~ 78 (264)
|..+..-.|...++.+..++.-.+++.....|++++..+ +||.|+++|+||.|.|++.......+. +.|++ .|+.+
T Consensus 15 G~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~-~~DwA~~D~~a 93 (281)
T COG4757 15 GYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWR-YLDWARLDFPA 93 (281)
T ss_pred CccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccc-hhhhhhcchHH
Confidence 333444455555554446677777888888999999999 999999999999999987654444443 44444 35555
Q ss_pred HHHHh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhh
Q 024681 79 ILDTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAY 154 (264)
Q Consensus 79 ~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (264)
.++.+ .-.+.+.+|||+||.+.-.+. +++ +..+....+..+.+............ ..+..........|..
T Consensus 94 al~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~---~~l~~lv~p~lt~w~g 168 (281)
T COG4757 94 ALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGA---VLLWNLVGPPLTFWKG 168 (281)
T ss_pred HHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccc---eeeccccccchhhccc
Confidence 55544 345899999999998755444 344 56666666654443221111000000 0001111111222222
Q ss_pred hcccccCCCC--ChH-HHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcC
Q 024681 155 GYAPLAVGAD--VPA-AVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLG 231 (264)
Q Consensus 155 ~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 231 (264)
.+...+.+.. .+. ..+++.+.....+....... .....+..+.+++|+..+...+|+.+|+...+.+.+..+
T Consensus 169 ~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~-----~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~ 243 (281)
T COG4757 169 YMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA-----MRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYR 243 (281)
T ss_pred cCcHhhcCCCccCcchHHHHHHHHhcCccccccChh-----HhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhh
Confidence 2222222222 111 33444433322111100000 112345567789999999999999999999999999888
Q ss_pred CC-ceEEEecC----CCCcccccCh-hcHHHHHHHHh
Q 024681 232 GR-NTVELLKI----EGHLPHLSAP-AIVGPVIRRAL 262 (264)
Q Consensus 232 ~~-~~~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 262 (264)
+. .+...++. -||+-...++ |.+.+.+.+|+
T Consensus 244 nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 244 NAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 74 34444443 5998887777 77777777765
No 94
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.73 E-value=3.9e-16 Score=106.18 Aligned_cols=158 Identities=23% Similarity=0.312 Sum_probs=103.4
Q ss_pred EEEecCCCCCh-hhHHHhh-hhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 20 LVLAHGFGTDQ-SAWQRIL-PYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 20 vv~~hG~~~~~-~~~~~~~-~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
|+++||++++. ..|.... +.| ..++|-..++ +.+ +.+++.+.+.+.+.... +++++||||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~~P--------~~~~W~~~l~~~i~~~~-~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------DNP--------DLDEWVQALDQAIDAID-EPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------TS----------HHHHHHHHHHCCHC-T-TTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------CCC--------CHHHHHHHHHHHHhhcC-CCeEEEEeCHH
Confidence 68999988875 5666554 455 4577776665 111 47888888888877664 57999999999
Q ss_pred HHHHHHHH-HhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHh
Q 024681 97 AMIGLLAS-IRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRT 175 (264)
Q Consensus 97 g~~a~~~a-~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (264)
+..+++++ .....+|++++|++|+... . ... ..+.
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~-~-----------------------~~~----~~~~---------------- 101 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPD-D-----------------------PEP----FPPE---------------- 101 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCG-C-----------------------HHC----CTCG----------------
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcc-c-----------------------ccc----hhhh----------------
Confidence 99999999 7778899999999985220 0 000 0000
Q ss_pred hcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcH
Q 024681 176 LFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIV 254 (264)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 254 (264)
.. ... ......+.+|.++|.+++|+++|.+.++++++.+. ++++.++++||+...+.-.++
T Consensus 102 ~~---------------~f~-~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~~~~G~~~~ 162 (171)
T PF06821_consen 102 LD---------------GFT-PLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFNAASGFGPW 162 (171)
T ss_dssp GC---------------CCT-TSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGGGTHSS-
T ss_pred cc---------------ccc-cCcccccCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCcccccCCCch
Confidence 00 000 00112346678999999999999999999999997 689999999998876654443
No 95
>PRK10162 acetyl esterase; Provisional
Probab=99.72 E-value=2.2e-15 Score=113.88 Aligned_cols=105 Identities=18% Similarity=0.202 Sum_probs=73.2
Q ss_pred CCCCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC--
Q 024681 14 GTGDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-- 85 (264)
Q Consensus 14 g~~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 85 (264)
+.+.|+||++||.+ ++...|..+++.| .|+.|+++|+|...+...+ ....+..+..+.+.+..+.+++
T Consensus 78 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p----~~~~D~~~a~~~l~~~~~~~~~d~ 153 (318)
T PRK10162 78 PDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFP----QAIEEIVAVCCYFHQHAEDYGINM 153 (318)
T ss_pred CCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCC----CcHHHHHHHHHHHHHhHHHhCCCh
Confidence 44558999999966 5566788888888 4999999999976543211 1111233333444444455554
Q ss_pred CeEEEEecChhHHHHHHHHHhC------CCccceeEEecCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRR------PDLFTKLILIGASPR 122 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~ 122 (264)
++++++|+|+||.+|+.++.+. +.++++++++.|...
T Consensus 154 ~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 154 SRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred hHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 5899999999999999988653 357899999987543
No 96
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.71 E-value=4.2e-16 Score=103.50 Aligned_cols=166 Identities=22% Similarity=0.251 Sum_probs=116.1
Q ss_pred CCceEEEecC---CCCC--hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC---
Q 024681 16 GDRILVLAHG---FGTD--QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--- 85 (264)
Q Consensus 16 ~~p~vv~~hG---~~~~--~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 85 (264)
..|..|++|. ++++ ...-..++..| .||.++.+|+||.|.|.... +. -.-..+|..++++++..
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f-D~-----GiGE~~Da~aaldW~~~~hp 100 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF-DN-----GIGELEDAAAALDWLQARHP 100 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc-cC-----CcchHHHHHHHHHHHHhhCC
Confidence 4578888886 2222 23445666777 89999999999999997641 11 12234555556655532
Q ss_pred --CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 86 --NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 86 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
....+.|+|+|+++++.+|.+.|+ ....+.+.+.... +
T Consensus 101 ~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~----------------------------~----------- 140 (210)
T COG2945 101 DSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA----------------------------Y----------- 140 (210)
T ss_pred CchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc----------------------------h-----------
Confidence 234689999999999999999986 4444444442110 0
Q ss_pred CChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCC
Q 024681 164 DVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEG 243 (264)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 243 (264)
+ ...+....+|.++|+|+.|.+++....-.+++..+ .+++.+++++
T Consensus 141 -------------------------------d-fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~--~~~i~i~~a~ 186 (210)
T COG2945 141 -------------------------------D-FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIK--ITVITIPGAD 186 (210)
T ss_pred -------------------------------h-hhhccCCCCCceeEecChhhhhcHHHHHHhhcCCC--CceEEecCCC
Confidence 0 01133447799999999999999888888887744 6889999999
Q ss_pred CcccccChhcHHHHHHHHh
Q 024681 244 HLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 244 H~~~~~~~~~~~~~i~~fl 262 (264)
|+++- +-..+.+.+.+||
T Consensus 187 HFF~g-Kl~~l~~~i~~~l 204 (210)
T COG2945 187 HFFHG-KLIELRDTIADFL 204 (210)
T ss_pred ceecc-cHHHHHHHHHHHh
Confidence 99885 4567888888887
No 97
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.71 E-value=9.1e-17 Score=118.40 Aligned_cols=110 Identities=15% Similarity=0.197 Sum_probs=80.4
Q ss_pred EEEeCCCCceEEEecCCCCCh-hhHHH-hhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-
Q 024681 10 VRVVGTGDRILVLAHGFGTDQ-SAWQR-ILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL- 83 (264)
Q Consensus 10 ~~~~g~~~p~vv~~hG~~~~~-~~~~~-~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (264)
+....+.+|++|++||++++. ..|.. +...+ .+|+|+++|+++++.+... .... +...+.+++..+++.+
T Consensus 29 ~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~---~a~~-~~~~v~~~la~~l~~L~ 104 (275)
T cd00707 29 NSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP---QAVN-NTRVVGAELAKFLDFLV 104 (275)
T ss_pred hcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH---HHHH-hHHHHHHHHHHHHHHHH
Confidence 333455678999999999887 56654 44444 5799999999988433211 1111 3555566666666554
Q ss_pred -----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 84 -----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 84 -----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
+.++++++||||||.+|..++.++|++++++++++|+...
T Consensus 105 ~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 105 DNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 3468999999999999999999999999999999987543
No 98
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.70 E-value=1.2e-15 Score=124.55 Aligned_cols=90 Identities=19% Similarity=0.236 Sum_probs=74.3
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCC---------CCCCccc----------chHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPD---------YFDFRRY----------TTLDAYVDD 75 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~---------~~~~~~~----------~~~~~~~~~ 75 (264)
.|+||++||++++...|..+++.| +||+|+++|+||||.|... ......| .++.+.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 368999999999999999999999 7999999999999999432 1111123 258999999
Q ss_pred HHHHHHHhC----------------CCeEEEEecChhHHHHHHHHHh
Q 024681 76 LLNILDTLG----------------VNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 76 ~~~~~~~~~----------------~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+..+...++ ..+++++||||||.++..++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 998888776 2489999999999999999875
No 99
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.69 E-value=1.9e-15 Score=110.32 Aligned_cols=99 Identities=20% Similarity=0.230 Sum_probs=85.7
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--C---------CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--N---------HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~---------g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (264)
.|++++|||+++-..|..+++.| . -|.|+++.+||+|.|+.+ ....+. ..+.+.-+..++-++|.+
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~--sk~GFn-~~a~ArvmrkLMlRLg~n 229 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAP--SKTGFN-AAATARVMRKLMLRLGYN 229 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCC--ccCCcc-HHHHHHHHHHHHHHhCcc
Confidence 48999999999999999999988 2 278999999999999865 234554 778888899999999999
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
++.+-|..||+.++..+|..+|++|.++-+-.+
T Consensus 230 kffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 230 KFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred eeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 999999999999999999999999987655433
No 100
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.66 E-value=5.1e-15 Score=107.28 Aligned_cols=239 Identities=16% Similarity=0.161 Sum_probs=90.9
Q ss_pred eEEEEeCC-CCceEEEecCCCCCh---hhHHHhhhhc--CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHH
Q 024681 8 LHVRVVGT-GDRILVLAHGFGTDQ---SAWQRILPYL--NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLL 77 (264)
Q Consensus 8 ~~~~~~g~-~~p~vv~~hG~~~~~---~~~~~~~~~l--~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~ 77 (264)
+.|...+. .+..||||.|++... .+...+++.| .+|.++-+.++ |+|-+ ++++-++||.
T Consensus 23 fe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-----------SL~~D~~eI~ 91 (303)
T PF08538_consen 23 FEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-----------SLDRDVEEIA 91 (303)
T ss_dssp EEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-------------HHHHHHHHH
T ss_pred EEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-----------hhhhHHHHHH
Confidence 33443333 334899999987644 4567788888 69999999875 44433 5777788877
Q ss_pred HHHHHh--------CCCeEEEEecChhHHHHHHHHHhCC-----CccceeEEecCCCCCCCCCCCCCCccH-HHHHHHHH
Q 024681 78 NILDTL--------GVNRCAYVGHSVSAMIGLLASIRRP-----DLFTKLILIGASPRFLNDEDYHGGFEE-AEIDKVFR 143 (264)
Q Consensus 78 ~~~~~~--------~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 143 (264)
++++++ +.++|+|+|||.|+.-+++++.... ..|+++|+-+|... .+........ ........
T Consensus 92 ~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD---REa~~~~~~~~~~~~~~v~ 168 (303)
T PF08538_consen 92 QLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD---REAILNFLGEREAYEELVA 168 (303)
T ss_dssp HHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE------TTSTTTSHHH---HHHHHH
T ss_pred HHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC---hhHhhhcccchHHHHHHHH
Confidence 777655 2468999999999999999988642 57999999998543 2222222221 12222222
Q ss_pred HHHhhhh-----hhh-hhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCC
Q 024681 144 AMEANYE-----AWA-YGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVS 217 (264)
Q Consensus 144 ~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 217 (264)
....... ..+ ..+...... ..+-....+...... ...-.-+...+....+...+.+++.|+|++.+++|..
T Consensus 169 ~A~~~i~~g~~~~~lp~~~~~~~~~-~~PiTA~Rf~SL~s~--~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEy 245 (303)
T PF08538_consen 169 LAKELIAEGKGDEILPREFTPLVFY-DTPITAYRFLSLASP--GGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEY 245 (303)
T ss_dssp HHHHHHHCT-TT-GG----GGTTT--SS---HHHHHT-S-S--SHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-
T ss_pred HHHHHHHcCCCCceeeccccccccC-CCcccHHHHHhccCC--CCcccccCCCCCHHHHHHHhccCCCceEEEecCCCce
Confidence 2111100 000 001111110 111111111111111 1111112223334455567788899999999999999
Q ss_pred cchhhH-HHHHHHcCCC-------ceEEEecCCCCcccccCh----hcHHHHHHHHhc
Q 024681 218 VPVSVA-EYLQRHLGGR-------NTVELLKIEGHLPHLSAP----AIVGPVIRRALS 263 (264)
Q Consensus 218 ~~~~~~-~~~~~~~~~~-------~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 263 (264)
+|...- +.+.+++... ....++||++|.+-.+.. +.+.+.+..||+
T Consensus 246 vP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 246 VPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ----------------------------------------------------------
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 986442 3333333221 234589999998765433 357888888874
No 101
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.66 E-value=5.6e-14 Score=96.64 Aligned_cols=177 Identities=14% Similarity=0.096 Sum_probs=107.6
Q ss_pred EEEecCCCCChhhHHH--hhhhc----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEec
Q 024681 20 LVLAHGFGTDQSAWQR--ILPYL----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGH 93 (264)
Q Consensus 20 vv~~hG~~~~~~~~~~--~~~~l----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 93 (264)
|+++||+.++...... +.+.+ ....+.++|++. ......+.+.++++....+.+.|+|.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 7999999998876643 33444 345667777641 36667788888898887777999999
Q ss_pred ChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChH--HHHH
Q 024681 94 SVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPA--AVRE 171 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 171 (264)
|+||..|..+|.+++ +++ |+++|+... ...+ ...+. .......... ....
T Consensus 67 SlGG~~A~~La~~~~--~~a-vLiNPav~p-----------~~~l---~~~iG-----------~~~~~~~~e~~~~~~~ 118 (187)
T PF05728_consen 67 SLGGFYATYLAERYG--LPA-VLINPAVRP-----------YELL---QDYIG-----------EQTNPYTGESYELTEE 118 (187)
T ss_pred ChHHHHHHHHHHHhC--CCE-EEEcCCCCH-----------HHHH---HHhhC-----------ccccCCCCccceechH
Confidence 999999999999885 444 899986431 0000 01110 0000000000 0000
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccCh
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAP 251 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 251 (264)
...... .+......-..+++++.++.|.+++...+ .+.+.+ +..++.+|++|.+. +-
T Consensus 119 ~~~~l~-----------------~l~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~~-~~~~i~~ggdH~f~--~f 175 (187)
T PF05728_consen 119 HIEELK-----------------ALEVPYPTNPERYLVLLQTGDEVLDYREA---VAKYRG-CAQIIEEGGDHSFQ--DF 175 (187)
T ss_pred hhhhcc-----------------eEeccccCCCccEEEEEecCCcccCHHHH---HHHhcC-ceEEEEeCCCCCCc--cH
Confidence 000000 00000122256899999999999988433 444455 45567788999764 45
Q ss_pred hcHHHHHHHHh
Q 024681 252 AIVGPVIRRAL 262 (264)
Q Consensus 252 ~~~~~~i~~fl 262 (264)
++....|.+|+
T Consensus 176 ~~~l~~i~~f~ 186 (187)
T PF05728_consen 176 EEYLPQIIAFL 186 (187)
T ss_pred HHHHHHHHHhh
Confidence 66777888876
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.66 E-value=4.5e-14 Score=103.52 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=86.1
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-----CCceEEEecCCCCCCCCCCC---CCCcccchHHHHHHHHHHHHHHhC----
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-----NHHRVIMFDLVCAGSVNPDY---FDFRRYTTLDAYVDDLLNILDTLG---- 84 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-----~g~~v~~~d~~g~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---- 84 (264)
++.+++++|.++-...|..++..| .++.|+++.+.||-.++... .+...|+ +++.++.-.+++++.-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~s-L~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFS-LQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccC-HHHHHHHHHHHHHHHhhhhc
Confidence 358999999999999999988776 48999999999997775431 1234554 8888887777776652
Q ss_pred --CCeEEEEecChhHHHHHHHHHhCC---CccceeEEecCCCCC
Q 024681 85 --VNRCAYVGHSVSAMIGLLASIRRP---DLFTKLILIGASPRF 123 (264)
Q Consensus 85 --~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~ 123 (264)
..+++|+|||.|+++++++..+.+ .+|.+++++-|....
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 357999999999999999999999 789999999886544
No 103
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.65 E-value=7.6e-15 Score=108.84 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=82.7
Q ss_pred CCCcceeeEEEE--eCC-CCceEEEecCCCCCh-h--hHHHhhh-------hc--CCceEEEecCCCCCCCCCCCCCCcc
Q 024681 1 MGDLLEALHVRV--VGT-GDRILVLAHGFGTDQ-S--AWQRILP-------YL--NHHRVIMFDLVCAGSVNPDYFDFRR 65 (264)
Q Consensus 1 ~g~~~~~~~~~~--~g~-~~p~vv~~hG~~~~~-~--~~~~~~~-------~l--~g~~v~~~d~~g~G~s~~~~~~~~~ 65 (264)
+|..+..--|+. .+. .-|+||..|+++.+. . ....... .+ +||.|+..|.||.|.|.......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 455566666666 333 348999999988653 1 1111111 15 99999999999999997642111
Q ss_pred cchHHHHHHHHHHHHHHhC-----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCC
Q 024681 66 YTTLDAYVDDLLNILDTLG-----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGG 132 (264)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 132 (264)
.....+|..++|+.+. ..+|.++|.|++|..++.+|...|..+++++...+.........+..+
T Consensus 79 ---~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG 147 (272)
T PF02129_consen 79 ---SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGG 147 (272)
T ss_dssp ---SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETT
T ss_pred ---ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCC
Confidence 4556777777777762 148999999999999999999888899999998876555443333333
No 104
>PRK10115 protease 2; Provisional
Probab=99.65 E-value=5.1e-15 Score=122.01 Aligned_cols=206 Identities=16% Similarity=0.130 Sum_probs=125.1
Q ss_pred CCccee-eEEEEe---CCCCceEEEecCCCCChh--hHHHhhhhc--CCceEEEecCCCCCCCCCCCCC----CcccchH
Q 024681 2 GDLLEA-LHVRVV---GTGDRILVLAHGFGTDQS--AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFD----FRRYTTL 69 (264)
Q Consensus 2 g~~~~~-~~~~~~---g~~~p~vv~~hG~~~~~~--~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~----~~~~~~~ 69 (264)
|..+.. +.|+.. +...|+||++||..+... .|......| +||.|+.++.||-|.-...... .....++
T Consensus 426 G~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~ 505 (686)
T PRK10115 426 GVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTF 505 (686)
T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcH
Confidence 444443 445442 223589999999776653 355544555 9999999999997654321100 1111246
Q ss_pred HHHHHHHHHHHHHh--CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCC---CCCCCCccHHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTL--GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLND---EDYHGGFEEAEIDKVFRA 144 (264)
Q Consensus 70 ~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (264)
+|+++.+..+++.- ..+++.+.|.|.||.++..++.++|++++++|...|....... .....
T Consensus 506 ~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~------------- 572 (686)
T PRK10115 506 NDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPL------------- 572 (686)
T ss_pred HHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCC-------------
Confidence 66666666666542 3468999999999999999999999999999999886432110 00000
Q ss_pred HHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccC-EEEEecCCCCCcchhhH
Q 024681 145 MEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVP-CVIIQTSKDVSVPVSVA 223 (264)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~ 223 (264)
...+...+ +.........++. ..+....+.+++.| +|+++|.+|.-||+..+
T Consensus 573 ----~~~~~~e~-----G~p~~~~~~~~l~------------------~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~ 625 (686)
T PRK10115 573 ----TTGEFEEW-----GNPQDPQYYEYMK------------------SYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEP 625 (686)
T ss_pred ----ChhHHHHh-----CCCCCHHHHHHHH------------------HcCchhccCccCCCceeEEecCCCCCcCchHH
Confidence 00000000 0000001111111 11222335567889 56779999999999998
Q ss_pred HHHHHHcCCC---ceEEEe---cCCCCccc
Q 024681 224 EYLQRHLGGR---NTVELL---KIEGHLPH 247 (264)
Q Consensus 224 ~~~~~~~~~~---~~~~~~---~~~gH~~~ 247 (264)
.++..++... .+.+++ +++||...
T Consensus 626 ~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 626 AKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred HHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 8888877432 566777 89999843
No 105
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.64 E-value=5.3e-15 Score=110.29 Aligned_cols=237 Identities=15% Similarity=0.150 Sum_probs=139.4
Q ss_pred eEEEEeCC--CCceEEEecCCCCChhhH-----HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHH
Q 024681 8 LHVRVVGT--GDRILVLAHGFGTDQSAW-----QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLN 78 (264)
Q Consensus 8 ~~~~~~g~--~~p~vv~~hG~~~~~~~~-----~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 78 (264)
+.|+...+ .++|++++|.+-.....+ ..+...| +|..|+.+++++-..+... ...++|. .+.+.+.+..
T Consensus 96 iqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~-~~~edYi-~e~l~~aid~ 173 (445)
T COG3243 96 IQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA-KNLEDYI-LEGLSEAIDT 173 (445)
T ss_pred hccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh-ccHHHHH-HHHHHHHHHH
Confidence 44444433 346899999977665554 3466666 9999999999877666431 1223333 3445555666
Q ss_pred HHHHhCCCeEEEEecChhHHHHHHHHHhCCCc-cceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHH------------
Q 024681 79 ILDTLGVNRCAYVGHSVSAMIGLLASIRRPDL-FTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAM------------ 145 (264)
Q Consensus 79 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 145 (264)
+.+..+.++|.++|+|.||.++..+++.++.+ |++++++.+...+..............+..+...+
T Consensus 174 v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma 253 (445)
T COG3243 174 VKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMA 253 (445)
T ss_pred HHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHH
Confidence 66777889999999999999999998888877 99999998876664433322222221122111111
Q ss_pred ------HhhhhhhhhhcccccCCCCChHHH--HHHHHhhcccCchhhhhhhhhhcCC-----------ccccccCCcccC
Q 024681 146 ------EANYEAWAYGYAPLAVGADVPAAV--REFSRTLFNMRPDISLFVSKTVFDT-----------DLRGILGLVRVP 206 (264)
Q Consensus 146 ------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~i~~P 206 (264)
+..---|. .+.+.......+-.. ..+...-.+.+......+.+.+... ...-.+.+|+||
T Consensus 254 ~~F~mLrpndliw~-~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~p 332 (445)
T COG3243 254 IVFFLLRPNDLIWN-YFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCP 332 (445)
T ss_pred HHHHhcCccccchH-HHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccc
Confidence 11100111 111111111111111 1111111122222222333222211 223457889999
Q ss_pred EEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 207 CVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 207 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
++.+.|++|.++|.+......+.+++.++++.. ++||....
T Consensus 333 vy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~-~sGHIa~v 373 (445)
T COG3243 333 VYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLS-RSGHIAGV 373 (445)
T ss_pred eEEEeecccccCCHHHHHHHHHhcCCceEEEEe-cCceEEEE
Confidence 999999999999999999999999985555555 49996444
No 106
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.58 E-value=6.4e-14 Score=106.62 Aligned_cols=106 Identities=19% Similarity=0.260 Sum_probs=80.5
Q ss_pred CCCceEEEecCCCCChhhHHHh------hhhc--CCceEEEecCCCCCCCCC----C---CCCCcccchHHHHHH-HHHH
Q 024681 15 TGDRILVLAHGFGTDQSAWQRI------LPYL--NHHRVIMFDLVCAGSVNP----D---YFDFRRYTTLDAYVD-DLLN 78 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~------~~~l--~g~~v~~~d~~g~G~s~~----~---~~~~~~~~~~~~~~~-~~~~ 78 (264)
..+|+|++.||+.+++..|-.. +-.| +||.|..-+.||...|.. . .....+++ +++++. |+-+
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS-~~Em~~yDLPA 149 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFS-WHEMGTYDLPA 149 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecc-hhhhhhcCHHH
Confidence 5678999999999999988533 2244 999999999999877743 1 11133444 666543 5555
Q ss_pred HHHH----hCCCeEEEEecChhHHHHHHHHHhCCC---ccceeEEecCCC
Q 024681 79 ILDT----LGVNRCAYVGHSVSAMIGLLASIRRPD---LFTKLILIGASP 121 (264)
Q Consensus 79 ~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~ 121 (264)
.++. .+.++++.+|||.|+.....++...|+ +|+..++++|+.
T Consensus 150 ~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 150 MIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 5554 467899999999999999999888875 799999999976
No 107
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.58 E-value=2.3e-13 Score=113.09 Aligned_cols=213 Identities=10% Similarity=0.013 Sum_probs=117.1
Q ss_pred hhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC--------------------CCeEEEEecCh
Q 024681 38 PYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG--------------------VNRCAYVGHSV 95 (264)
Q Consensus 38 ~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~G~S~ 95 (264)
+.| +||.|+.+|.||+|.|+.... .+ ..+..+|..++++++. ..+|.++|.|+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~---~~--~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT---TG--DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc---cC--CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 455 899999999999999976421 11 1445667777777764 35999999999
Q ss_pred hHHHHHHHHHhCCCccceeEEecCCCCCCCCC------CCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHH
Q 024681 96 SAMIGLLASIRRPDLFTKLILIGASPRFLNDE------DYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
||.+++.+|...|+.++++|..++...+...- .....+.......+..... ... ....... ......
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~---~r~---~~~~~~~-~~~~~~ 420 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTY---SRN---LLAGDYL-RHNEAC 420 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhh---hcc---cCcchhh-cchHHH
Confidence 99999999999998999999988754321100 0000000000000000000 000 0000000 000111
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---CceEEEecCCCCcc
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---RNTVELLKIEGHLP 246 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~ 246 (264)
+.....+..............+...+....+.++++|+|+++|..|..+++..+.++.+.+.. ..++.+.+ ++|..
T Consensus 421 ~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~ 499 (767)
T PRK05371 421 EKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVY 499 (767)
T ss_pred HHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccC
Confidence 111110000000000000011122344556788999999999999999998877777776642 25665554 78954
Q ss_pred cc-cChhcHHHHHHHHhc
Q 024681 247 HL-SAPAIVGPVIRRALS 263 (264)
Q Consensus 247 ~~-~~~~~~~~~i~~fl~ 263 (264)
.. ..+.++.+.+.+|+.
T Consensus 500 ~~~~~~~d~~e~~~~Wfd 517 (767)
T PRK05371 500 PNNWQSIDFRDTMNAWFT 517 (767)
T ss_pred CCchhHHHHHHHHHHHHH
Confidence 33 334566677777764
No 108
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.58 E-value=4.1e-13 Score=92.91 Aligned_cols=202 Identities=18% Similarity=0.184 Sum_probs=104.7
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC-CCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEEE
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA-GSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCAY 90 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 90 (264)
.++||+.+|++...+.|..++.+| .||+|+.+|...| |.|+.. ...++ +....+++..+++++ +..++.|
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~---I~eft-ms~g~~sL~~V~dwl~~~g~~~~GL 105 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD---INEFT-MSIGKASLLTVIDWLATRGIRRIGL 105 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-----------------HHHHHHHHHHHHHHHHHTT---EEE
T ss_pred CCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC---hhhcc-hHHhHHHHHHHHHHHHhcCCCcchh
Confidence 379999999999999999999999 9999999999877 888764 45564 888888888888877 6778999
Q ss_pred EecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhh-hhhhhhcccccCCCCChHHH
Q 024681 91 VGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANY-EAWAYGYAPLAVGADVPAAV 169 (264)
Q Consensus 91 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (264)
+.-|+.|.+|+..|.+- .+.-+|...+... .+..+.+.+. .++ ..+........--....-..
T Consensus 106 IAaSLSaRIAy~Va~~i--~lsfLitaVGVVn-----------lr~TLe~al~---~Dyl~~~i~~lp~dldfeGh~l~~ 169 (294)
T PF02273_consen 106 IAASLSARIAYEVAADI--NLSFLITAVGVVN-----------LRDTLEKALG---YDYLQLPIEQLPEDLDFEGHNLGA 169 (294)
T ss_dssp EEETTHHHHHHHHTTTS----SEEEEES--S------------HHHHHHHHHS---S-GGGS-GGG--SEEEETTEEEEH
T ss_pred hhhhhhHHHHHHHhhcc--CcceEEEEeeeee-----------HHHHHHHHhc---cchhhcchhhCCCcccccccccch
Confidence 99999999999999854 3677776665322 1111111110 000 00100000000000000011
Q ss_pred HHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC-ceEEEecCCCCccc
Q 024681 170 REFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR-NTVELLKIEGHLPH 247 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 247 (264)
+.+........-... .+....++.+++|++.+++++|.++......++...+... ++++.++|++|.+.
T Consensus 170 ~vFv~dc~e~~w~~l---------~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 170 EVFVTDCFEHGWDDL---------DSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHHHHHHHTT-SSH---------HHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHHHHHHcCCccc---------hhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 112111111111111 1223456778999999999999999998888888866543 88999999999775
No 109
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.58 E-value=1.9e-13 Score=122.26 Aligned_cols=99 Identities=15% Similarity=0.081 Sum_probs=85.8
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecC
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHS 94 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S 94 (264)
.|+++++||++++...|..+.+.| .++.|++++.+|++.+.. ..+ +++++++++.+.++.+.. .+++++|||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~-----~~~-~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQ-----TAT-SLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCC-----CCC-CHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 468999999999999999999999 999999999999986632 223 599999999999988754 489999999
Q ss_pred hhHHHHHHHHHh---CCCccceeEEecCCC
Q 024681 95 VSAMIGLLASIR---RPDLFTKLILIGASP 121 (264)
Q Consensus 95 ~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 121 (264)
+||.+|..+|.+ .++++..++++++.+
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999999985 578899999998743
No 110
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.56 E-value=2.6e-13 Score=100.04 Aligned_cols=239 Identities=15% Similarity=0.110 Sum_probs=132.1
Q ss_pred CCceEEEecCCCCChhhHHH-h-hhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHH-------HHHHHH---HH
Q 024681 16 GDRILVLAHGFGTDQSAWQR-I-LPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYV-------DDLLNI---LD 81 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~-~-~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~-------~~~~~~---~~ 81 (264)
.+|.+|.++|.|.+....+. + +..| +|+..+.+..|-||...|.......+.+..++. .+...+ ++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 46888999999987655543 3 4555 999999999999998876433222222222222 222233 33
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCC--CCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccc
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRF--LNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPL 159 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
.-|..++.+.|.||||.+|...|...|..+..+-++++.... ....-.........+..-+. ...+..........
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~--~~~~~~~~~~~~~~ 248 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFE--DTVYEEEISDIPAQ 248 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhc--ccchhhhhcccccC
Confidence 337789999999999999999999999887777666654221 11111111112222211100 00000000000000
Q ss_pred cCCCCChHHHHHHHHhhcccCchhhhhhhhhhc-CCccccccCC-cccCEEEEecCCCCCcchhhHHHHHHHcCCCceEE
Q 024681 160 AVGADVPAAVREFSRTLFNMRPDISLFVSKTVF-DTDLRGILGL-VRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVE 237 (264)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 237 (264)
.... .. ....-...+.+........+. ..+....... -.-.+.++.+++|.++|......+.+..|+ +++.
T Consensus 249 ~~~~----~~--~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPG-sEvR 321 (348)
T PF09752_consen 249 NKSL----PL--DSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPG-SEVR 321 (348)
T ss_pred cccc----cc--hhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCC-CeEE
Confidence 0000 00 000000000010000000000 0111111111 123478899999999999999999999999 8999
Q ss_pred EecCCCCc-ccccChhcHHHHHHHHhcC
Q 024681 238 LLKIEGHL-PHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 238 ~~~~~gH~-~~~~~~~~~~~~i~~fl~~ 264 (264)
.++ +||. .++-+.+.+.++|.+-+++
T Consensus 322 ~l~-gGHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 322 YLP-GGHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred Eec-CCcEEEeeechHHHHHHHHHHhhC
Confidence 998 5994 6666788899999887764
No 111
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.56 E-value=2.5e-14 Score=83.92 Aligned_cols=72 Identities=24% Similarity=0.429 Sum_probs=59.8
Q ss_pred eeEEEEeCC---CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 7 ALHVRVVGT---GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 7 ~~~~~~~g~---~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
+|+++.+.+ .+.+|+++||++.++..|..+++.| +||.|+++|+||||.|+.. .....+++++++|+..+++
T Consensus 3 ~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~---rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 3 KLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGK---RGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCc---ccccCCHHHHHHHHHHHhC
Confidence 466666654 2459999999999999999999999 9999999999999999753 2333469999999998864
No 112
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.54 E-value=1.2e-12 Score=93.40 Aligned_cols=172 Identities=17% Similarity=0.184 Sum_probs=109.1
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH-Hh------CCC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD-TL------GVN 86 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~ 86 (264)
.=|+|||+||+......|..+.+++ .||.|+++|+...+..... ....+..+.++.+.+-++ .+ +..
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~----~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s 91 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDT----DEVASAAEVIDWLAKGLESKLPLGVKPDFS 91 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcc----hhHHHHHHHHHHHHhcchhhcccccccccc
Confidence 3489999999998888899999999 8999999996654332111 111112222222222111 11 345
Q ss_pred eEEEEecChhHHHHHHHHHhC-----CCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 87 RCAYVGHSVSAMIGLLASIRR-----PDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
++.|.|||.||-+|..++..+ +.+++++++++|.........
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~--------------------------------- 138 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQ--------------------------------- 138 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccC---------------------------------
Confidence 899999999999999999887 568999999999632110000
Q ss_pred CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCC---------Ccch-hhHHHHHHHcC
Q 024681 162 GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDV---------SVPV-SVAEYLQRHLG 231 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~---------~~~~-~~~~~~~~~~~ 231 (264)
..+... .....--+.+.|+++|..+.+. ..|. ...+++.+..+
T Consensus 139 -----------------~~P~v~----------~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~ 191 (259)
T PF12740_consen 139 -----------------TEPPVL----------TYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECK 191 (259)
T ss_pred -----------------CCCccc----------cCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcC
Confidence 000000 0001112246899999776663 3332 34677888777
Q ss_pred CCceEEEecCCCCcccccCh
Q 024681 232 GRNTVELLKIEGHLPHLSAP 251 (264)
Q Consensus 232 ~~~~~~~~~~~gH~~~~~~~ 251 (264)
..+-..+..+.||+-+++..
T Consensus 192 ~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 192 PPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCEEEEEeCCCCchHhhcCC
Confidence 65667778889998777665
No 113
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.52 E-value=2e-12 Score=83.53 Aligned_cols=183 Identities=14% Similarity=0.088 Sum_probs=120.9
Q ss_pred EEeCCCCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCCCCCC-----CCCCCCCcccchHHHHHHHHHHHHH
Q 024681 11 RVVGTGDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSV-----NPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 11 ~~~g~~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s-----~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
...|+..-+||+.||.+.+. .....++..| +|+.|..++++..-.. .++ +..-+-...+...+.++..
T Consensus 8 ~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp---~~~~t~~~~~~~~~aql~~ 84 (213)
T COG3571 8 DPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPP---PGSGTLNPEYIVAIAQLRA 84 (213)
T ss_pred CCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCc---CccccCCHHHHHHHHHHHh
Confidence 33455445899999988765 4567788888 9999999998754222 221 1111224566677777777
Q ss_pred HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccC
Q 024681 82 TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAV 161 (264)
Q Consensus 82 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
.+.-.+.++-|+||||.++.+++......|+++++++-+......+
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP---------------------------------- 130 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP---------------------------------- 130 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc----------------------------------
Confidence 7766799999999999999998887666699999998532111000
Q ss_pred CCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecC
Q 024681 162 GADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKI 241 (264)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
+ .-..+.+..+++|++|.+|+.|.+-..+..... .+....+++.+++
T Consensus 131 -----e--------------------------~~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~ 177 (213)
T COG3571 131 -----E--------------------------QLRTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLED 177 (213)
T ss_pred -----c--------------------------cchhhhccCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEEecc
Confidence 0 000123566799999999999998876655222 2333389999999
Q ss_pred CCCcccccC----------hhcHHHHHHHHhc
Q 024681 242 EGHLPHLSA----------PAIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~~~~----------~~~~~~~i~~fl~ 263 (264)
+.|.+--.+ -...++.|..|++
T Consensus 178 adHDLkp~k~vsgls~~~hL~~~A~~va~~~~ 209 (213)
T COG3571 178 ADHDLKPRKLVSGLSTADHLKTLAEQVAGWAR 209 (213)
T ss_pred CccccccccccccccHHHHHHHHHHHHHHHHh
Confidence 999643222 2344556666654
No 114
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.51 E-value=2.4e-12 Score=84.87 Aligned_cols=170 Identities=16% Similarity=0.159 Sum_probs=112.5
Q ss_pred ceEEEecCCCCCh-hhHHHhhh-hcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecCh
Q 024681 18 RILVLAHGFGTDQ-SAWQRILP-YLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSV 95 (264)
Q Consensus 18 p~vv~~hG~~~~~-~~~~~~~~-~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 95 (264)
+.+|++||+.++. ..|+...+ .|.. +-.+++. + ...- ..+++++.+.+.++.. .++++||+||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~--a~rveq~-----~-----w~~P-~~~dWi~~l~~~v~a~-~~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN--ARRVEQD-----D-----WEAP-VLDDWIARLEKEVNAA-EGPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc--chhcccC-----C-----CCCC-CHHHHHHHHHHHHhcc-CCCeEEEEecc
Confidence 4789999988765 45654433 3322 2222221 1 1111 4889999998888887 46799999999
Q ss_pred hHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHh
Q 024681 96 SAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRT 175 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (264)
|+.++++++.+...+|.++.+++|+-...... ....
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~~~~--------------------------------------------~~~~ 104 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSRPEI--------------------------------------------RPKH 104 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCcccccc--------------------------------------------chhh
Confidence 99999999998877999999999852210000 0000
Q ss_pred hcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccccc---Chh
Q 024681 176 LFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS---APA 252 (264)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~ 252 (264)
.... +. ....+..-|.+++...+|++++.+.++.+++.+.+ .++.+..+||+--.+ .-.
T Consensus 105 ~~tf---------------~~-~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~~sG~g~wp 166 (181)
T COG3545 105 LMTF---------------DP-IPREPLPFPSVVVASRNDPYVSYEHAEDLANAWGS--ALVDVGEGGHINAESGFGPWP 166 (181)
T ss_pred cccc---------------CC-CccccCCCceeEEEecCCCCCCHHHHHHHHHhccH--hheecccccccchhhcCCCcH
Confidence 0000 00 01123456999999999999999999999999985 788888899964332 234
Q ss_pred cHHHHHHHHhc
Q 024681 253 IVGPVIRRALS 263 (264)
Q Consensus 253 ~~~~~i~~fl~ 263 (264)
+....+.+|+.
T Consensus 167 eg~~~l~~~~s 177 (181)
T COG3545 167 EGYALLAQLLS 177 (181)
T ss_pred HHHHHHHHHhh
Confidence 45566666553
No 115
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.50 E-value=5e-12 Score=90.84 Aligned_cols=99 Identities=15% Similarity=0.165 Sum_probs=84.5
Q ss_pred ceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecCh
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHSV 95 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~ 95 (264)
|+|+++|+.++....|..++..| ....|+..+.||++.-... ..+++++++...+.|..... .+++|+|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~------~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQP------FASLDDMAAAYVAAIRRVQPEGPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccc------cCCHHHHHHHHHHHHHHhCCCCCEEEEeecc
Confidence 58999999999999999999999 8899999999999853221 11699999998888888754 5999999999
Q ss_pred hHHHHHHHHHh---CCCccceeEEecCCCC
Q 024681 96 SAMIGLLASIR---RPDLFTKLILIGASPR 122 (264)
Q Consensus 96 Gg~~a~~~a~~---~p~~v~~~vl~~~~~~ 122 (264)
||.+|..+|.+ ..+.|..++++++.+.
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999876 3457999999998765
No 116
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.48 E-value=5.6e-13 Score=94.84 Aligned_cols=166 Identities=18% Similarity=0.197 Sum_probs=88.4
Q ss_pred CCceEEEecCCCCChhhHHHhhhh----c-C-CceEEEecCCCCC-----CCC-------------C--CCCC----Ccc
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPY----L-N-HHRVIMFDLVCAG-----SVN-------------P--DYFD----FRR 65 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~----l-~-g~~v~~~d~~g~G-----~s~-------------~--~~~~----~~~ 65 (264)
.++.|||+||++.++..++..... | + ++..+.+|-|--- -.. + .... ...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 457899999999999999765554 4 5 8888888865221 110 0 0000 112
Q ss_pred cchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhC--------CCccceeEEecCCCCCCCCCCCCCCccHHH
Q 024681 66 YTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRR--------PDLFTKLILIGASPRFLNDEDYHGGFEEAE 137 (264)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 137 (264)
+..+++..+.+.+.++..+. =..|+|+|.||.+|..++... ...++.+|++++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~----------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD----------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE------------
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-----------
Confidence 44567777777777777652 356999999999998877532 1247888888874321000
Q ss_pred HHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCC
Q 024681 138 IDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVS 217 (264)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 217 (264)
. ...+ .-.+|++|+|.|+|++|.+
T Consensus 151 --------------------------------------------------~----~~~~--~~~~i~iPtlHv~G~~D~~ 174 (212)
T PF03959_consen 151 --------------------------------------------------Y----QELY--DEPKISIPTLHVIGENDPV 174 (212)
T ss_dssp --------------------------------------------------G----TTTT----TT---EEEEEEETT-SS
T ss_pred --------------------------------------------------h----hhhh--ccccCCCCeEEEEeCCCCC
Confidence 0 0000 2345799999999999999
Q ss_pred cchhhHHHHHHHcCCCceEEEecCCCCcccccC
Q 024681 218 VPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSA 250 (264)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 250 (264)
++++.++.+.+.+.+..+++..+ +||.++...
T Consensus 175 ~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~ 206 (212)
T PF03959_consen 175 VPPERSEALAEMFDPDARVIEHD-GGHHVPRKK 206 (212)
T ss_dssp S-HHHHHHHHHHHHHHEEEEEES-SSSS----H
T ss_pred cchHHHHHHHHhccCCcEEEEEC-CCCcCcCCh
Confidence 99999999999887633444555 899887654
No 117
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.44 E-value=2.3e-11 Score=87.80 Aligned_cols=203 Identities=14% Similarity=0.122 Sum_probs=115.6
Q ss_pred CceEEEecCCCCChhhHHHhhhhc---CCc----eEEEecCCCC----CCCCCCCCC-------Cccc-chHHHHHHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL---NHH----RVIMFDLVCA----GSVNPDYFD-------FRRY-TTLDAYVDDLL 77 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l---~g~----~v~~~d~~g~----G~s~~~~~~-------~~~~-~~~~~~~~~~~ 77 (264)
..|.||+||++++...+..++..+ .+. -++.++--|. |.=...... ..+. .+....++.+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 358999999999999998888777 222 2334443332 221110000 0122 25777888888
Q ss_pred HHHHHh----CCCeEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhh
Q 024681 78 NILDTL----GVNRCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEAN 148 (264)
Q Consensus 78 ~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
.++..| +.+++.+|||||||..++.++..+.. ++.++|.++++.............
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~--------------- 155 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQ--------------- 155 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTT---------------
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchh---------------
Confidence 888777 67899999999999999999887532 589999999864322111100000
Q ss_pred hhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecC------CCCCcchhh
Q 024681 149 YEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTS------KDVSVPVSV 222 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~------~D~~~~~~~ 222 (264)
..+...- ........+.+.... +..++ -++.+|-|.|. .|..||...
T Consensus 156 -----~~~~~~g-p~~~~~~y~~l~~~~--------------------~~~~p-~~i~VLnI~G~~~~g~~sDG~V~~~S 208 (255)
T PF06028_consen 156 -----NDLNKNG-PKSMTPMYQDLLKNR--------------------RKNFP-KNIQVLNIYGDLEDGSNSDGIVPNAS 208 (255)
T ss_dssp -----T-CSTT--BSS--HHHHHHHHTH--------------------GGGST-TT-EEEEEEEESBTTCSBTSSSBHHH
T ss_pred -----hhhcccC-CcccCHHHHHHHHHH--------------------HhhCC-CCeEEEEEecccCCCCCCCeEEeHHH
Confidence 0000000 000011111111110 00011 15689999998 789999998
Q ss_pred HHHHHHHcCCC---ceEEEecC--CCCcccccChhcHHHHHHHHh
Q 024681 223 AEYLQRHLGGR---NTVELLKI--EGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 223 ~~~~~~~~~~~---~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl 262 (264)
+..+...+.+. .+-.++.| +.|.-..|++ +|.+.|.+||
T Consensus 209 s~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 209 SLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp HCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred HHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 88888887653 44555654 6898877776 5779999997
No 118
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.44 E-value=2.2e-12 Score=92.39 Aligned_cols=95 Identities=20% Similarity=0.216 Sum_probs=60.2
Q ss_pred EEEecCCCC---ChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-----hCCCeE
Q 024681 20 LVLAHGFGT---DQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT-----LGVNRC 88 (264)
Q Consensus 20 vv~~hG~~~---~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 88 (264)
||++||.+. +......++..+ .|+.|+.+|+|-..+..-+ ..+++..+.+..+++. .+.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p-------~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFP-------AALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTT-------HHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccccc-------ccccccccceeeeccccccccccccce
Confidence 799999664 334445556555 6999999999954332111 1244444444455554 344699
Q ss_pred EEEecChhHHHHHHHHHhCCC----ccceeEEecCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRPD----LFTKLILIGASP 121 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~ 121 (264)
+++|+|.||.+|+.++.+..+ .+++++++.|..
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 999999999999998875432 489999999853
No 119
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.43 E-value=1.6e-11 Score=84.05 Aligned_cols=176 Identities=18% Similarity=0.185 Sum_probs=112.4
Q ss_pred CCceEEEecCCCCChhhHHH----hhhhc-CCceEEEecCCC------C---CCC----CCC-------------CCCCc
Q 024681 16 GDRILVLAHGFGTDQSAWQR----ILPYL-NHHRVIMFDLVC------A---GSV----NPD-------------YFDFR 64 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~----~~~~l-~g~~v~~~d~~g------~---G~s----~~~-------------~~~~~ 64 (264)
.++-|+|+||+-.+...|.. +.+.+ +-+..+.+|-|- . ..+ .+. .....
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 35789999999999988864 33444 456777777662 1 110 000 00122
Q ss_pred ccchHHHHHHHHHHHHHHhCCCeE-EEEecChhHHHHHHHHHhCC------C--ccceeEEecCCCCCCCCCCCCCCccH
Q 024681 65 RYTTLDAYVDDLLNILDTLGVNRC-AYVGHSVSAMIGLLASIRRP------D--LFTKLILIGASPRFLNDEDYHGGFEE 135 (264)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p------~--~v~~~vl~~~~~~~~~~~~~~~~~~~ 135 (264)
.|..++...+.+...+++.| |+ .|+|.|.|+.++..++.... + .++-+|++++......
T Consensus 84 ~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~---------- 151 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK---------- 151 (230)
T ss_pred cccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc----------
Confidence 33345666667777777665 44 59999999999988887211 1 2567777776321000
Q ss_pred HHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCC
Q 024681 136 AEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKD 215 (264)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 215 (264)
.. +.....+.+++|.|.|.|+.|
T Consensus 152 --------------------------------~~-------------------------~~~~~~~~i~~PSLHi~G~~D 174 (230)
T KOG2551|consen 152 --------------------------------KL-------------------------DESAYKRPLSTPSLHIFGETD 174 (230)
T ss_pred --------------------------------hh-------------------------hhhhhccCCCCCeeEEecccc
Confidence 00 000113457999999999999
Q ss_pred CCcchhhHHHHHHHcCCCceEEEecCCCCcccccCh--hcHHHHHHHHh
Q 024681 216 VSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAP--AIVGPVIRRAL 262 (264)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl 262 (264)
.++|...++.+++.+++ ..+..-| +||+++..++ +.+.+.|..++
T Consensus 175 ~iv~~~~s~~L~~~~~~-a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 175 TIVPSERSEQLAESFKD-ATVLEHP-GGHIVPNKAKYKEKIADFIQSFL 221 (230)
T ss_pred eeecchHHHHHHHhcCC-CeEEecC-CCccCCCchHHHHHHHHHHHHHH
Confidence 99999999999999999 5555555 9999886654 44444444444
No 120
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.42 E-value=1.4e-11 Score=83.09 Aligned_cols=199 Identities=15% Similarity=0.119 Sum_probs=117.6
Q ss_pred EEEeCC--CCceEEEecCCC----CChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 10 VRVVGT--GDRILVLAHGFG----TDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 10 ~~~~g~--~~p~vv~~hG~~----~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
+..+|+ ..|..||+||.- ....+...+-..+ .||+|..+++ +.+... ..--.++.+...-+.-+++.
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~---htL~qt~~~~~~gv~filk~ 131 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQV---HTLEQTMTQFTHGVNFILKY 131 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCccc---ccHHHHHHHHHHHHHHHHHh
Confidence 345664 457999999932 2233444555566 9999999864 444321 00001244444444455555
Q ss_pred hC-CCeEEEEecChhHHHHHHHHHh-CCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc
Q 024681 83 LG-VNRCAYVGHSVSAMIGLLASIR-RPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA 160 (264)
Q Consensus 83 ~~-~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
.. .+.+.+-|||.|+.+|+.+..+ +..+|.+++++++.... .. +.. .. .....-
T Consensus 132 ~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l---------------~E----L~~-te----~g~dlg 187 (270)
T KOG4627|consen 132 TENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL---------------RE----LSN-TE----SGNDLG 187 (270)
T ss_pred cccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH---------------HH----HhC-Cc----cccccC
Confidence 43 3567777999999999876655 44589999988874220 00 000 00 000000
Q ss_pred CCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec
Q 024681 161 VGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK 240 (264)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (264)
+..+. . .. .......+..+++|++++.|++|.---.+..+.+...+.+ +++..++
T Consensus 188 Lt~~~---a-------e~--------------~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f~ 242 (270)
T KOG4627|consen 188 LTERN---A-------ES--------------VSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFTLFK 242 (270)
T ss_pred cccch---h-------hh--------------cCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh-cceeecC
Confidence 00000 0 00 0001123456789999999999976667888889998888 8999999
Q ss_pred CCCCcccccCh----hcHHHHHHHHhc
Q 024681 241 IEGHLPHLSAP----AIVGPVIRRALS 263 (264)
Q Consensus 241 ~~gH~~~~~~~----~~~~~~i~~fl~ 263 (264)
+.+|+-..+.. ..+..++.+|+.
T Consensus 243 n~~hy~I~~~~~~~~s~~~~~~~~~~~ 269 (270)
T KOG4627|consen 243 NYDHYDIIEETAIDDSDVSRFLRNIEI 269 (270)
T ss_pred CcchhhHHHHhccccchHHHHHHHHhc
Confidence 99998655542 456666666653
No 121
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.42 E-value=2.9e-11 Score=95.50 Aligned_cols=104 Identities=18% Similarity=0.099 Sum_probs=73.7
Q ss_pred CCceEEEecCCCCChhhHHHhhh------------------hc-CCceEEEecCC-CCCCCCCCCCCCcccchHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP------------------YL-NHHRVIMFDLV-CAGSVNPDYFDFRRYTTLDAYVDD 75 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~------------------~l-~g~~v~~~d~~-g~G~s~~~~~~~~~~~~~~~~~~~ 75 (264)
..|+||+++|.++++..+-.+.+ .+ +..+++.+|.| |+|.|.....+ ...+.++.++|
T Consensus 76 ~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~--~~~~~~~~a~d 153 (462)
T PTZ00472 76 EAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKAD--YDHNESEVSED 153 (462)
T ss_pred CCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCC--CCCChHHHHHH
Confidence 45899999999998876533221 12 45789999985 88888543211 11246788888
Q ss_pred HHHHHHHh-------CCCeEEEEecChhHHHHHHHHHhC----------CCccceeEEecCCC
Q 024681 76 LLNILDTL-------GVNRCAYVGHSVSAMIGLLASIRR----------PDLFTKLILIGASP 121 (264)
Q Consensus 76 ~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~----------p~~v~~~vl~~~~~ 121 (264)
+.++++.. +..+++|+|||+||.++..+|.+. +-.++++++.++..
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 88888743 447999999999999987777652 12468888888753
No 122
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.38 E-value=1.9e-10 Score=81.19 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=68.9
Q ss_pred CceEEEecCCCCChhhHHHhh--hhc---CCceEEEecCCCCCCCC--CCCC---CCcccchHHHHHHHHHHHHHHhCC-
Q 024681 17 DRILVLAHGFGTDQSAWQRIL--PYL---NHHRVIMFDLVCAGSVN--PDYF---DFRRYTTLDAYVDDLLNILDTLGV- 85 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~--~~l---~g~~v~~~d~~g~G~s~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~- 85 (264)
.|.||++||.+.+...+.... ..| .||.|+.++........ .... ......+...+++-+..+....++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 489999999999998776532 234 78999999864221110 0000 001111122233333334444444
Q ss_pred -CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 86 -NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 86 -~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
++|++.|+|.||.++..++..+|+.+.++..+++.+
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 589999999999999999999999999998888754
No 123
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.37 E-value=2e-10 Score=79.93 Aligned_cols=243 Identities=9% Similarity=0.006 Sum_probs=135.0
Q ss_pred eCCCCceEEEecCCCCChhhHHHhhhhc-----CCceEEEecCCCCCCCC---C---CCCCCcccchHHHHHHHHHHHHH
Q 024681 13 VGTGDRILVLAHGFGTDQSAWQRILPYL-----NHHRVIMFDLVCAGSVN---P---DYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 13 ~g~~~p~vv~~hG~~~~~~~~~~~~~~l-----~g~~v~~~d~~g~G~s~---~---~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+..++.+++++|.++....|.++++.| +.+.++++-..||-.-. . .....+.+ ++++.++.=.++++
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eif-sL~~QV~HKlaFik 103 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIF-SLQDQVDHKLAFIK 103 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccccccccccc-chhhHHHHHHHHHH
Confidence 4456789999999999999999999877 34668998888885443 1 11112334 48888888888887
Q ss_pred HhC--CCeEEEEecChhHHHHHHHHHhCC--CccceeEEecCCCCCCCCCC--CCCCccH---HHHHHH-----HHHHHh
Q 024681 82 TLG--VNRCAYVGHSVSAMIGLLASIRRP--DLFTKLILIGASPRFLNDED--YHGGFEE---AEIDKV-----FRAMEA 147 (264)
Q Consensus 82 ~~~--~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~~~~--~~~~~~~---~~~~~~-----~~~~~~ 147 (264)
..- ..+++++|||.|+++.+.+..... -.|.+++++=|...-...+. +...... .....+ ......
T Consensus 104 ~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~ 183 (301)
T KOG3975|consen 104 EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPG 183 (301)
T ss_pred HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChH
Confidence 763 358999999999999998876432 25777777766421110000 0000000 000000 000000
Q ss_pred hhhhhhhhcccccCCCCChHHHH--------HHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcc
Q 024681 148 NYEAWAYGYAPLAVGADVPAAVR--------EFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVP 219 (264)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 219 (264)
..+.++-.+.- .......+... ...+.......+....... ...+.+++-.+-+.+.+|..|.++|
T Consensus 184 ~ir~~Li~~~l-~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~-----~d~e~~een~d~l~Fyygt~DgW~p 257 (301)
T KOG3975|consen 184 FIRFILIKFML-CGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTT-----RDIEYCEENLDSLWFYYGTNDGWVP 257 (301)
T ss_pred HHHHHHHHHhc-ccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHH-----hHHHHHHhcCcEEEEEccCCCCCcc
Confidence 00000000000 00000001110 0011111011110000000 0112223334567899999999999
Q ss_pred hhhHHHHHHHcCCC-ceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 220 VSVAEYLQRHLGGR-NTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 220 ~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
.+....+.+.+|.. .++-+ ++..|.+...+.+..+..+.+.++
T Consensus 258 ~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 258 SHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred hHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhhC
Confidence 99999999999973 33333 679999988888888888877653
No 124
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.37 E-value=6.7e-12 Score=85.89 Aligned_cols=172 Identities=15% Similarity=0.094 Sum_probs=114.4
Q ss_pred ceEEEecCCCC-ChhhHHHhhhhc--CCceEEEecCC-CCCCCCCCC-CCCcc---cchHHHHHHHHHHHHHHh---C-C
Q 024681 18 RILVLAHGFGT-DQSAWQRILPYL--NHHRVIMFDLV-CAGSVNPDY-FDFRR---YTTLDAYVDDLLNILDTL---G-V 85 (264)
Q Consensus 18 p~vv~~hG~~~-~~~~~~~~~~~l--~g~~v~~~d~~-g~G~s~~~~-~~~~~---~~~~~~~~~~~~~~~~~~---~-~ 85 (264)
..||++--+.+ ....-+..+..+ .||.|+.+|+. |--.|.... ..... -.+....-.++..+++.+ + .
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 36777776444 444467778877 99999999984 311121100 00000 012334445666666555 4 4
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
+++.++|.||||.++..+....| .+.+.+.+-|+..
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~------------------------------------------- 155 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV------------------------------------------- 155 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC-------------------------------------------
Confidence 68999999999999998888877 6888887776421
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCC----ceEEEecC
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR----NTVELLKI 241 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~ 241 (264)
+ .....++++|++++.|+.|.++|++....+.+.+.+. .++.++++
T Consensus 156 -----------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g 205 (242)
T KOG3043|consen 156 -----------------------------D-SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSG 205 (242)
T ss_pred -----------------------------C-hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCC
Confidence 0 1234567899999999999999999999888888654 36899999
Q ss_pred CCCcccc-----cCh------hcHHHHHHHHhc
Q 024681 242 EGHLPHL-----SAP------AIVGPVIRRALS 263 (264)
Q Consensus 242 ~gH~~~~-----~~~------~~~~~~i~~fl~ 263 (264)
.+|-+.. +.| ++..+.+.+|+.
T Consensus 206 ~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 206 VGHGFVARRANISSPEDKKAAEEAYQRFISWFK 238 (242)
T ss_pred ccchhhhhccCCCChhHHHHHHHHHHHHHHHHH
Confidence 9995552 233 445555556654
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.36 E-value=6.7e-12 Score=89.16 Aligned_cols=137 Identities=17% Similarity=0.192 Sum_probs=63.9
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADV 165 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
++|.|+|.|.||-+|+.+|..+| .|+++|.++|+.............. ...................
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~------------~~lp~~~~~~~~~~~~~~~ 88 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS------------KPLPYLPFDISKFSWNEPG 88 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--------------EE----B-GGG-EE-TTS
T ss_pred CCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC------------ccCCcCCcChhhceecCCc
Confidence 68999999999999999999999 7999999998754322211111110 0000000000000000000
Q ss_pred hHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhh-HHHHHHHcCC-----CceEEEe
Q 024681 166 PAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSV-AEYLQRHLGG-----RNTVELL 239 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~-----~~~~~~~ 239 (264)
.. ..................-.+.++++|+|+|.|++|.+.|... ++.+.+++.. ..++..+
T Consensus 89 ----------~~--~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y 156 (213)
T PF08840_consen 89 ----------LL--RSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSY 156 (213)
T ss_dssp -----------E--E-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEE
T ss_pred ----------ce--ehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEc
Confidence 00 0000000000000111122367789999999999999998544 4445544432 1678889
Q ss_pred cCCCCccc
Q 024681 240 KIEGHLPH 247 (264)
Q Consensus 240 ~~~gH~~~ 247 (264)
+++||++.
T Consensus 157 ~~aGH~i~ 164 (213)
T PF08840_consen 157 PGAGHLIE 164 (213)
T ss_dssp TTB-S---
T ss_pred CCCCceec
Confidence 99999753
No 126
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.35 E-value=2e-11 Score=93.89 Aligned_cols=103 Identities=20% Similarity=0.350 Sum_probs=58.5
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCC------CC-----C-----CCC-----C------cccc
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSV------NP-----D-----YFD-----F------RRYT 67 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s------~~-----~-----~~~-----~------~~~~ 67 (264)
-|+|||-||++++...|..++..| +||-|+++|+|..-.+ +. . ..+ . ..+.
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 389999999999999999999999 9999999999953111 00 0 000 0 0000
Q ss_pred ----hHHHHHHHHHHHHHHh--------------------------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEe
Q 024681 68 ----TLDAYVDDLLNILDTL--------------------------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI 117 (264)
Q Consensus 68 ----~~~~~~~~~~~~~~~~--------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 117 (264)
.++.-++++..+++.+ +.+++.++|||+||..++..+.+. .++++.|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 1112223333333222 134799999999999999888776 579999999
Q ss_pred cCC
Q 024681 118 GAS 120 (264)
Q Consensus 118 ~~~ 120 (264)
++.
T Consensus 259 D~W 261 (379)
T PF03403_consen 259 DPW 261 (379)
T ss_dssp S--
T ss_pred CCc
Confidence 983
No 127
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.34 E-value=7.5e-11 Score=82.87 Aligned_cols=101 Identities=19% Similarity=0.263 Sum_probs=70.7
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-------CCCeE
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-------GVNRC 88 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 88 (264)
|+|+|+||+......|..+...+ .||-|+++++-.. ..+. ..+...+....++.+..-++.+ +..++
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~~p~--~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kl 122 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL--FPPD--GQDEIKSAASVINWLPEGLQHVLPENVEANLSKL 122 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc--cCCC--chHHHHHHHHHHHHHHhhhhhhCCCCcccccceE
Confidence 79999999999999999999999 9999999998642 1111 0111111222333333333222 34689
Q ss_pred EEEecChhHHHHHHHHHhCC--CccceeEEecCCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRP--DLFTKLILIGASPR 122 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~ 122 (264)
.++|||.||-.|.++|..+. -.++++|.++|...
T Consensus 123 al~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 123 ALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred EEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 99999999999999998763 25788999998643
No 128
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.34 E-value=2.1e-11 Score=87.17 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=67.0
Q ss_pred CceEEEecCCCCChhhHHHhhhhc----------CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL----------NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL--- 83 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l----------~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 83 (264)
+.+|||+||.+++...++.+...+ ..++++++|+......-.. ..-....+...+.+..+++..
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g---~~l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG---RTLQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccc---ccHHHHHHHHHHHHHHHHHhhhhc
Confidence 468999999999988887765433 3688999998764322110 000001222233333444444
Q ss_pred --CCCeEEEEecChhHHHHHHHHHhCC---CccceeEEecCCC
Q 024681 84 --GVNRCAYVGHSVSAMIGLLASIRRP---DLFTKLILIGASP 121 (264)
Q Consensus 84 --~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~ 121 (264)
+.+++++|||||||.+|..++...+ +.|+.+|.++++.
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 4579999999999999988776543 5799999999864
No 129
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=3.7e-11 Score=99.95 Aligned_cols=199 Identities=15% Similarity=0.116 Sum_probs=124.9
Q ss_pred ceEEEecCCCCChhhH----HHhhhhc---CCceEEEecCCCCCCCCCCC-----CCCcccchHHHHHHHHHHHHHHh--
Q 024681 18 RILVLAHGFGTDQSAW----QRILPYL---NHHRVIMFDLVCAGSVNPDY-----FDFRRYTTLDAYVDDLLNILDTL-- 83 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~----~~~~~~l---~g~~v~~~d~~g~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-- 83 (264)
|.+|.+||.+++.... ..+...+ .|+.|+.+|.||.|.....- .+.+.. ...+....+..+++..
T Consensus 527 Pllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~~i 605 (755)
T KOG2100|consen 527 PLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDV-EVKDQIEAVKKVLKLPFI 605 (755)
T ss_pred CEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCc-chHHHHHHHHHHHhcccc
Confidence 7889999988743321 1222223 89999999999988764320 111222 2566666666666554
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCC-ccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPD-LFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVG 162 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
+.+++.++|+|+||.+++.++...|+ .+++.+.++|...+.-..... ....++
T Consensus 606 D~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~--------------------------terymg 659 (755)
T KOG2100|consen 606 DRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTY--------------------------TERYMG 659 (755)
T ss_pred cHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccc--------------------------cHhhcC
Confidence 34589999999999999999999984 456669999865432110000 000000
Q ss_pred CCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCE-EEEecCCCCCcchhhHHHHHHHcCCC---ceEEE
Q 024681 163 ADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPC-VIIQTSKDVSVPVSVAEYLQRHLGGR---NTVEL 238 (264)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~ 238 (264)
.. ...... .........+..++.|. |++||+.|..++.+.+..+.+.+... .++.+
T Consensus 660 ~p----------------~~~~~~----y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~v 719 (755)
T KOG2100|consen 660 LP----------------SENDKG----YEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLV 719 (755)
T ss_pred CC----------------ccccch----hhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEE
Confidence 00 000000 00112223344555565 99999999999999888888877543 78899
Q ss_pred ecCCCCcccccCh-hcHHHHHHHHhc
Q 024681 239 LKIEGHLPHLSAP-AIVGPVIRRALS 263 (264)
Q Consensus 239 ~~~~gH~~~~~~~-~~~~~~i~~fl~ 263 (264)
+|+.+|.+..-.. ..+...+..|+.
T Consensus 720 ypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 720 YPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred eCCCCcccccccchHHHHHHHHHHHH
Confidence 9999998775443 667777777764
No 130
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.32 E-value=3.1e-11 Score=81.52 Aligned_cols=94 Identities=21% Similarity=0.184 Sum_probs=73.8
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCeEEEEe
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNRCAYVG 92 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G 92 (264)
.+|++-|=++-...=..++..| +|+.|+.+|-+-|=.+.+ +.++.+.|+..+++.. +.++++|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r---------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiG 74 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER---------TPEQTAADLARIIRHYRARWGRKRVVLIG 74 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC---------CHHHHHHHHHHHHHHHHHHhCCceEEEEe
Confidence 5788888666555556788888 999999999876655543 4677788877777654 678999999
Q ss_pred cChhHHHHHHHHHhCC----CccceeEEecCCC
Q 024681 93 HSVSAMIGLLASIRRP----DLFTKLILIGASP 121 (264)
Q Consensus 93 ~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~ 121 (264)
+|+|+-+.-....+.| ++|+.++++++..
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9999988888877777 4789999999863
No 131
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.31 E-value=4.3e-10 Score=85.38 Aligned_cols=100 Identities=19% Similarity=0.188 Sum_probs=67.2
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hC--
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LG-- 84 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 84 (264)
..|+||++||.+ ++......+...+ .|+.|+++|+|-..+-.-+ . .+++..+.+..+.+. ++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p----~---~~~d~~~a~~~l~~~~~~~g~d 150 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFP----A---ALEDAYAAYRWLRANAAELGID 150 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCC----c---hHHHHHHHHHHHHhhhHhhCCC
Confidence 358999999965 3445554555544 8999999999865443211 1 244444444344433 33
Q ss_pred CCeEEEEecChhHHHHHHHHHhCCC----ccceeEEecCCCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRPD----LFTKLILIGASPR 122 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~ 122 (264)
.+++.++|+|.||.+++.++..-.+ ...+.+++.|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 4689999999999999988876443 4688888888644
No 132
>PRK04940 hypothetical protein; Provisional
Probab=99.30 E-value=1.1e-09 Score=74.02 Aligned_cols=168 Identities=12% Similarity=0.120 Sum_probs=93.7
Q ss_pred EEEecCCCCChhh--HHH-hhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---C-CCeEEEE
Q 024681 20 LVLAHGFGTDQSA--WQR-ILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---G-VNRCAYV 91 (264)
Q Consensus 20 vv~~hG~~~~~~~--~~~-~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~l~ 91 (264)
|+++|||.++... ... ..+.+ .+++++ +++ .. ......+.+.+.+..+ + .+++.||
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~-----~~---------~P~~a~~~l~~~i~~~~~~~~~~~~~li 65 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS-----TL---------HPKHDMQHLLKEVDKMLQLSDDERPLIC 65 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC-----CC---------CHHHHHHHHHHHHHHhhhccCCCCcEEE
Confidence 7999999998877 422 22233 455554 332 00 1233333444444321 1 2579999
Q ss_pred ecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHH
Q 024681 92 GHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVRE 171 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
|.|+||..|..+|.++. -..|+++|+... ...+. ..+.. +.... .....
T Consensus 66 GSSLGGyyA~~La~~~g---~~aVLiNPAv~P-----------~~~L~---~~ig~----------~~~y~----~~~~~ 114 (180)
T PRK04940 66 GVGLGGYWAERIGFLCG---IRQVIFNPNLFP-----------EENME---GKIDR----------PEEYA----DIATK 114 (180)
T ss_pred EeChHHHHHHHHHHHHC---CCEEEECCCCCh-----------HHHHH---HHhCC----------Ccchh----hhhHH
Confidence 99999999999999985 367889986431 00000 00000 00000 01111
Q ss_pred HHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCc-eEEEecCCCCcccccC
Q 024681 172 FSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRN-TVELLKIEGHLPHLSA 250 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~ 250 (264)
....+. .+-.-..+++..+.|.+.+...+.. .+.+ + +..+.+|+.|.+. +
T Consensus 115 h~~eL~-----------------------~~~p~r~~vllq~gDEvLDyr~a~~---~y~~-~y~~~v~~GGdH~f~--~ 165 (180)
T PRK04940 115 CVTNFR-----------------------EKNRDRCLVILSRNDEVLDSQRTAE---ELHP-YYEIVWDEEQTHKFK--N 165 (180)
T ss_pred HHHHhh-----------------------hcCcccEEEEEeCCCcccCHHHHHH---Hhcc-CceEEEECCCCCCCC--C
Confidence 111110 0112345899999999997655544 4444 4 6788998888653 4
Q ss_pred hhcHHHHHHHHhc
Q 024681 251 PAIVGPVIRRALS 263 (264)
Q Consensus 251 ~~~~~~~i~~fl~ 263 (264)
-++....|.+|+.
T Consensus 166 fe~~l~~I~~F~~ 178 (180)
T PRK04940 166 ISPHLQRIKAFKT 178 (180)
T ss_pred HHHHHHHHHHHHh
Confidence 4567777888764
No 133
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.29 E-value=5.1e-10 Score=80.12 Aligned_cols=94 Identities=19% Similarity=0.218 Sum_probs=71.1
Q ss_pred EecCCC--CChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-hCCCeEEEEecChhH
Q 024681 22 LAHGFG--TDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT-LGVNRCAYVGHSVSA 97 (264)
Q Consensus 22 ~~hG~~--~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~G~S~Gg 97 (264)
++|..+ ++...|..+...| ..+.++++|.+|++.+.... .+.+.+++.+...+.. ....+++++|||+||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg 75 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLP------ASADALVEAQAEAVLRAAGGRPFVLVGHSSGG 75 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC------CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHH
Confidence 455544 6778899999999 88999999999998765431 1366666655544433 345789999999999
Q ss_pred HHHHHHHHh---CCCccceeEEecCCC
Q 024681 98 MIGLLASIR---RPDLFTKLILIGASP 121 (264)
Q Consensus 98 ~~a~~~a~~---~p~~v~~~vl~~~~~ 121 (264)
.++..++.+ .++.+.+++++++..
T Consensus 76 ~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 76 LLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 999888876 456789999888754
No 134
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.28 E-value=1.5e-09 Score=81.42 Aligned_cols=100 Identities=21% Similarity=0.117 Sum_probs=71.1
Q ss_pred CCceEEEecCCCC-----ChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH-----
Q 024681 16 GDRILVLAHGFGT-----DQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT----- 82 (264)
Q Consensus 16 ~~p~vv~~hG~~~-----~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----- 82 (264)
..|.||++||.|. ....|..+...+ .+..|+++|+|=--+..- +.. .+|..+.+..+.+.
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~----Pa~---y~D~~~Al~w~~~~~~~~~ 161 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPF----PAA---YDDGWAALKWVLKNSWLKL 161 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCC----Ccc---chHHHHHHHHHHHhHHHHh
Confidence 3489999999663 356778888877 688999999985544432 233 44444444444442
Q ss_pred -hCCCeEEEEecChhHHHHHHHHHhC------CCccceeEEecCCCC
Q 024681 83 -LGVNRCAYVGHSVSAMIGLLASIRR------PDLFTKLILIGASPR 122 (264)
Q Consensus 83 -~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~ 122 (264)
.+.+++.|+|-|.||.+|..+|.+. +.++++.|++-|...
T Consensus 162 ~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 162 GADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred CCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 2557899999999999998887652 357999999998643
No 135
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.28 E-value=1.9e-11 Score=90.62 Aligned_cols=212 Identities=19% Similarity=0.166 Sum_probs=114.2
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCC--CCCCCCCCCCcccc--hHHHHHHHHHHHHHHh-------
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCA--GSVNPDYFDFRRYT--TLDAYVDDLLNILDTL------- 83 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~--G~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~------- 83 (264)
-|.|++-||.+.....|..+++.+ .||.|.++|.+|. |........+..|. -+.+...|+..+++.+
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 389999999999999999999999 8999999999984 43332111111111 1333444444444332
Q ss_pred ------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcc
Q 024681 84 ------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYA 157 (264)
Q Consensus 84 ------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
+..+|.++|||+||+.++.++....+......-+........... ... .. .+......+..
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~---~~~---~~----~l~q~~av~~~--- 217 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPP---GLN---GR----LLNQCAAVWLP--- 217 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCC---CcC---hh----hhccccccccc---
Confidence 345899999999999999988765432111111110000000000 000 00 00000000000
Q ss_pred cccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchh-hHHHHHHHcCCC-ce
Q 024681 158 PLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVS-VAEYLQRHLGGR-NT 235 (264)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~-~~ 235 (264)
.. ... ..+...+......+.... .+. ..-+.++++|++++.|..|.+.|.. .+......+++. ..
T Consensus 218 ~~--~~~---~rDpriravvA~~p~~~~-----~Fg---~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~ 284 (365)
T COG4188 218 RQ--AYD---LRDPRIRAVVAINPALGM-----IFG---TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKY 284 (365)
T ss_pred hh--hhc---cccccceeeeeccCCccc-----ccc---cccceeeecceeeecccccccCCcccccccccccCCcchhh
Confidence 00 000 000001111111111100 001 3446788999999999999987753 455566677773 36
Q ss_pred EEEecCCCCcccccChhcH
Q 024681 236 VELLKIEGHLPHLSAPAIV 254 (264)
Q Consensus 236 ~~~~~~~gH~~~~~~~~~~ 254 (264)
+..++++.|+-+.+-..+.
T Consensus 285 ~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 285 LRLVPGATHFSFLELCKEG 303 (365)
T ss_pred eeecCCCccccccccCccc
Confidence 7889999999888876653
No 136
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.23 E-value=3.3e-10 Score=77.19 Aligned_cols=175 Identities=19% Similarity=0.259 Sum_probs=111.6
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCC------CCCCC--------CcccchHHHHHHHHHHHHH
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVN------PDYFD--------FRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~------~~~~~--------~~~~~~~~~~~~~~~~~~~ 81 (264)
.+||++||.+.+...|..+++.| ++..-+++..|-.-.+. ...++ ..+..++...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 48999999999999998888878 77777777554321110 00000 0112235555666666666
Q ss_pred Hh---C--CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhc
Q 024681 82 TL---G--VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGY 156 (264)
Q Consensus 82 ~~---~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
+. + .+++.+-|.|+||.+++..+..+|..+.+++...+..... ....+.|
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~---------------------~~~~~~~---- 138 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRA---------------------SIGLPGW---- 138 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccc---------------------hhhccCC----
Confidence 54 3 3578999999999999999999987777776665521100 0000000
Q ss_pred ccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCC---C
Q 024681 157 APLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGG---R 233 (264)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~ 233 (264)
....+ ..|++..||+.|+++|....+...+.+.. .
T Consensus 139 ----------------------------------------~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~ 176 (206)
T KOG2112|consen 139 ----------------------------------------LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVR 176 (206)
T ss_pred ----------------------------------------ccccC--cchhheecccCCceeehHHHHHHHHHHHHcCCc
Confidence 00001 66999999999999997765555444432 2
Q ss_pred ceEEEecCCCCcccccChhcHHHHHH
Q 024681 234 NTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 234 ~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
+++..+++-+|...-+.-+++..+|.
T Consensus 177 ~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 177 VTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred eeeeecCCccccccHHHHHHHHHHHH
Confidence 78889999999876554454444443
No 137
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.18 E-value=9.3e-09 Score=79.54 Aligned_cols=80 Identities=18% Similarity=0.261 Sum_probs=59.4
Q ss_pred Hhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCC
Q 024681 35 RILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 35 ~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
.+...| .|+.||.+.+.- . +....++++.......+++.+ +..+.+|+|.|.||+.++.+|+.+|
T Consensus 92 evG~AL~~GHPvYFV~F~p----~-----P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFFP----E-----PEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred HHHHHHHcCCCeEEEEecC----C-----CCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc
Confidence 455577 899998887641 1 122225888777777776665 2348999999999999999999999
Q ss_pred CccceeEEecCCCCC
Q 024681 109 DLFTKLILIGASPRF 123 (264)
Q Consensus 109 ~~v~~~vl~~~~~~~ 123 (264)
+.+.-+|+-+++..+
T Consensus 163 d~~gplvlaGaPlsy 177 (581)
T PF11339_consen 163 DLVGPLVLAGAPLSY 177 (581)
T ss_pred CccCceeecCCCccc
Confidence 998888888776443
No 138
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.18 E-value=1.2e-09 Score=81.90 Aligned_cols=101 Identities=19% Similarity=0.140 Sum_probs=57.9
Q ss_pred ceEEEecCCCCChhhH------------------HHhhhhc--CCceEEEecCCCCCCCCCCCCCCc--cc--chHHH--
Q 024681 18 RILVLAHGFGTDQSAW------------------QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR--RY--TTLDA-- 71 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~------------------~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~--~~--~~~~~-- 71 (264)
|.||++||-+++.+.. ..+...| +||.|+++|.+|+|+......... .+ ..+..
T Consensus 116 PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~ 195 (390)
T PF12715_consen 116 PAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNL 195 (390)
T ss_dssp EEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHH
T ss_pred CEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHH
Confidence 7999999977665331 1234456 899999999999999854321111 11 11111
Q ss_pred ----------HHHHHHHHHHHh------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 72 ----------YVDDLLNILDTL------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 72 ----------~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
.+-|....++.+ +.++|.++|+||||..++.+|+.. ++|++.|..+-
T Consensus 196 l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 196 LMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 111223344554 335899999999999999999876 47988887764
No 139
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=5.8e-10 Score=87.74 Aligned_cols=219 Identities=13% Similarity=0.054 Sum_probs=131.6
Q ss_pred CCcceeeEEEEe----CCCCceEEEecCCCCChhh---HH--Hh--hhhc--CCceEEEecCCCCCCCCCC----CCCCc
Q 024681 2 GDLLEALHVRVV----GTGDRILVLAHGFGTDQSA---WQ--RI--LPYL--NHHRVIMFDLVCAGSVNPD----YFDFR 64 (264)
Q Consensus 2 g~~~~~~~~~~~----g~~~p~vv~~hG~~~~~~~---~~--~~--~~~l--~g~~v~~~d~~g~G~s~~~----~~~~~ 64 (264)
|.++-.+-|+.. |+.-|+++++-|.++-.-. |. .. ...| .||.|+.+|-||.-..... -....
T Consensus 623 g~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~km 702 (867)
T KOG2281|consen 623 GLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKM 702 (867)
T ss_pred CcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhcc
Confidence 334445555554 3344899999998864322 22 11 1234 8999999999997544321 00112
Q ss_pred ccchHHHHHHHHHHHHHHhC---CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHH
Q 024681 65 RYTTLDAYVDDLLNILDTLG---VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKV 141 (264)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (264)
.+..++|.++-+.-+.++.| .++|.+-|||+||++++....++|+.++..|.-+|...+..-
T Consensus 703 GqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~Y--------------- 767 (867)
T KOG2281|consen 703 GQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLY--------------- 767 (867)
T ss_pred CeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeee---------------
Confidence 33348888888888888774 479999999999999999999999988887776664332110
Q ss_pred HHHHHhhhhhhhhhcccccCCCC-ChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcch
Q 024681 142 FRAMEANYEAWAYGYAPLAVGAD-VPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPV 220 (264)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 220 (264)
...+..+.++-. ..+. .......... .+.++.-....|++||--|.-+..
T Consensus 768 -----------DTgYTERYMg~P~~nE~---------gY~agSV~~~---------VeklpdepnRLlLvHGliDENVHF 818 (867)
T KOG2281|consen 768 -----------DTGYTERYMGYPDNNEH---------GYGAGSVAGH---------VEKLPDEPNRLLLVHGLIDENVHF 818 (867)
T ss_pred -----------cccchhhhcCCCccchh---------cccchhHHHH---------HhhCCCCCceEEEEecccccchhh
Confidence 000111111100 0000 0000000000 011222244589999999998887
Q ss_pred hhHHHHHHHcCC---CceEEEecCCCCccccc-ChhcHHHHHHHHhcC
Q 024681 221 SVAEYLQRHLGG---RNTVELLKIEGHLPHLS-APAIVGPVIRRALSR 264 (264)
Q Consensus 221 ~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 264 (264)
.....+...+-. .-++.++|+.-|.+-.. ...-.-..+..||++
T Consensus 819 ~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 819 AHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred hhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 666666555422 17899999999986543 345566778888764
No 140
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.15 E-value=2.8e-08 Score=73.20 Aligned_cols=85 Identities=19% Similarity=0.226 Sum_probs=63.0
Q ss_pred CCceEEEecCCCCChhhH-------HHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---
Q 024681 16 GDRILVLAHGFGTDQSAW-------QRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL--- 83 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~-------~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 83 (264)
....||+.-|.++.-+.. ..+.+.. .+-+|+.+++||.|.|.... +.++++.|-.+.++++
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-------s~~dLv~~~~a~v~yL~d~ 208 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-------SRKDLVKDYQACVRYLRDE 208 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-------CHHHHHHHHHHHHHHHHhc
Confidence 445999999988766551 1222222 68899999999999996542 3677788777777766
Q ss_pred --C--CCeEEEEecChhHHHHHHHHHhC
Q 024681 84 --G--VNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 84 --~--~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
| .+++++.|||+||.++..++.++
T Consensus 209 ~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 209 EQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ccCCChheEEEeeccccHHHHHHHHHhc
Confidence 2 26899999999999988866654
No 141
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.14 E-value=5.4e-11 Score=83.80 Aligned_cols=89 Identities=21% Similarity=0.245 Sum_probs=53.3
Q ss_pred ceEEEecCCCC-ChhhHHHhhhhc--CCce---EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 18 RILVLAHGFGT-DQSAWQRILPYL--NHHR---VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 18 p~vv~~hG~~~-~~~~~~~~~~~l--~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
.||||+||.++ ....|..+.+.| +||. ++++++-....+...........+..++.+-+.+++++.+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 37999999998 668999999999 9999 79999843332211000000111234555566666677788 99999
Q ss_pred ecChhHHHHHHHHHhC
Q 024681 92 GHSVSAMIGLLASIRR 107 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~ 107 (264)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998887643
No 142
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.09 E-value=5e-10 Score=87.34 Aligned_cols=90 Identities=14% Similarity=0.104 Sum_probs=67.6
Q ss_pred CChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 28 TDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 28 ~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.....|..+++.| .||.+ ..|++|+|.+.... ..... .++++.+.+.++.+..+.++++|+||||||.+++.++.
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~-~~~~~-~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS-NRLPE-TMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccc-ccHHH-HHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHH
Confidence 4567899999999 67655 89999999986531 11111 24555555566666667789999999999999999998
Q ss_pred hCCCc----cceeEEecCC
Q 024681 106 RRPDL----FTKLILIGAS 120 (264)
Q Consensus 106 ~~p~~----v~~~vl~~~~ 120 (264)
.+|+. |+++|.++++
T Consensus 182 ~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HCCHhHHhHhccEEEECCC
Confidence 88863 7889999875
No 143
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.08 E-value=4e-10 Score=85.01 Aligned_cols=101 Identities=18% Similarity=0.287 Sum_probs=63.9
Q ss_pred CCCceEEEecCCCCCh--hhH-HHhhhhc--C---CceEEEecCCCCCCCCCCCCCCcccc----hHHHHHHHHHHHHHH
Q 024681 15 TGDRILVLAHGFGTDQ--SAW-QRILPYL--N---HHRVIMFDLVCAGSVNPDYFDFRRYT----TLDAYVDDLLNILDT 82 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~--~~~-~~~~~~l--~---g~~v~~~d~~g~G~s~~~~~~~~~~~----~~~~~~~~~~~~~~~ 82 (264)
..+|++|++|||..+. ..| ..+.+.+ . +++|+++|+...-. ..|. ......+.+..+++.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~--------~~Y~~a~~n~~~vg~~la~~l~~ 140 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS--------NNYPQAVANTRLVGRQLAKFLSF 140 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS--------S-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc--------ccccchhhhHHHHHHHHHHHHHH
Confidence 3568999999999877 334 4455544 4 79999999953211 1121 233444444444444
Q ss_pred h------CCCeEEEEecChhHHHHHHHHHhCCC--ccceeEEecCCCCC
Q 024681 83 L------GVNRCAYVGHSVSAMIGLLASIRRPD--LFTKLILIGASPRF 123 (264)
Q Consensus 83 ~------~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~ 123 (264)
+ ..++++|||||+||.+|-.++..... ++.++..++|+...
T Consensus 141 L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 141 LINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred HHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 3 34699999999999999999998877 89999999997554
No 144
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.06 E-value=3.1e-09 Score=76.16 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=61.1
Q ss_pred ceEEEecCCCCChhhHH-Hhhh------hc---CCceEEEecCC-CCCCCCCCCCCCcccchHHHHHHHHH-HHHHHhCC
Q 024681 18 RILVLAHGFGTDQSAWQ-RILP------YL---NHHRVIMFDLV-CAGSVNPDYFDFRRYTTLDAYVDDLL-NILDTLGV 85 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~-~~~~------~l---~g~~v~~~d~~-g~G~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 85 (264)
|.+||+||.+..+..-. .+.. .. .++-|+++.+- =+-.++.. ...+ .....+-+. .+.++.++
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~---t~~~--l~~~idli~~vlas~ynI 266 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEK---TLLY--LIEKIDLILEVLASTYNI 266 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccc---cchh--HHHHHHHHHHHHhhccCc
Confidence 89999999887665433 2222 11 23345555421 11122211 1111 333444444 23344455
Q ss_pred --CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 86 --NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 86 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+++++|.|+||.-++.++.++|+.+.+.+++++.
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 48999999999999999999999999999999974
No 145
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.06 E-value=9.3e-08 Score=75.84 Aligned_cols=105 Identities=12% Similarity=0.022 Sum_probs=68.4
Q ss_pred CCceEEEecCCCCChhhHHHhhh-------------------hc-CCceEEEecCC-CCCCCCCCCCCCcccchHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP-------------------YL-NHHRVIMFDLV-CAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~-------------------~l-~g~~v~~~d~~-g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
..|+||++.|.++++..+..+.+ .+ +..+++.+|.| |.|.|....... ...+.++.++
T Consensus 39 ~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~-~~~~~~~~a~ 117 (415)
T PF00450_consen 39 DDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSD-YVWNDDQAAE 117 (415)
T ss_dssp SS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGG-GS-SHHHHHH
T ss_pred CccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeecccccc-ccchhhHHHH
Confidence 56899999999999887754432 11 35689999966 999995432111 2234788888
Q ss_pred HHHHHHHHh-------CCCeEEEEecChhHHHHHHHHHh----C------CCccceeEEecCCC
Q 024681 75 DLLNILDTL-------GVNRCAYVGHSVSAMIGLLASIR----R------PDLFTKLILIGASP 121 (264)
Q Consensus 75 ~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~v~~~vl~~~~~ 121 (264)
++..+++.. ...+++|.|-|+||..+-.+|.. . +-.++++++.++..
T Consensus 118 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 118 DLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred HHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 888777654 44699999999999877655543 3 33578999998854
No 146
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.06 E-value=5.9e-09 Score=77.72 Aligned_cols=60 Identities=18% Similarity=0.128 Sum_probs=42.1
Q ss_pred cccCEEEEecCCCCCcchhhHHHHHHHcC----CCceEEEecCCCCcccc-cChhcHHHHHHHHh
Q 024681 203 VRVPCVIIQTSKDVSVPVSVAEYLQRHLG----GRNTVELLKIEGHLPHL-SAPAIVGPVIRRAL 262 (264)
Q Consensus 203 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 262 (264)
.++|+++.+|..|.++|....+.+.+.+. ..+++..+++.+|.... .......++|.+-|
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRF 282 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHH
Confidence 47899999999999999988877766542 12778888999996432 23344445555433
No 147
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.05 E-value=6.4e-10 Score=81.28 Aligned_cols=114 Identities=14% Similarity=0.124 Sum_probs=76.1
Q ss_pred CCcceeeEEEEe----CCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHH
Q 024681 2 GDLLEALHVRVV----GTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDL 76 (264)
Q Consensus 2 g~~~~~~~~~~~----g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~ 76 (264)
|+.+..++.... |+++..|||+-|..+--+. --+..-+ .||.|+.+++||++.|...++... +....-.-+
T Consensus 224 gneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n---~~nA~DaVv 299 (517)
T KOG1553|consen 224 GNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVN---TLNAADAVV 299 (517)
T ss_pred CcchhheeecCCCCCCCCCceEEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCccc---chHHHHHHH
Confidence 445555665544 3355688888875542110 1122334 799999999999999976533321 222222223
Q ss_pred HHHHHHhCC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 77 LNILDTLGV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 77 ~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.-.++.++. +.++|.|||.||.-+..+|..+|+ |+++|+-++.
T Consensus 300 QfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 300 QFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 345566654 689999999999999999999997 9999988764
No 148
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.97 E-value=6.8e-08 Score=76.54 Aligned_cols=121 Identities=17% Similarity=0.151 Sum_probs=78.0
Q ss_pred CCcceeeEEEEeCC-CCceEEEecCCCCChh-----hHHHhhh---hc--CCceEEEecCCCCCCCCCCCCCCcccchHH
Q 024681 2 GDLLEALHVRVVGT-GDRILVLAHGFGTDQS-----AWQRILP---YL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLD 70 (264)
Q Consensus 2 g~~~~~~~~~~~g~-~~p~vv~~hG~~~~~~-----~~~~~~~---~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 70 (264)
|..+..-.|+..+. ..|+++..+-++-... .-....+ .+ +||.|+..|.||.|.|+.. ...+.+
T Consensus 29 GvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~---~~~~~~-- 103 (563)
T COG2936 29 GVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV---FDPESS-- 103 (563)
T ss_pred CeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc---cceecc--
Confidence 44444445555544 3477777772222211 1122233 45 9999999999999999764 222222
Q ss_pred HHHHHHHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCC
Q 024681 71 AYVDDLLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDE 127 (264)
Q Consensus 71 ~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~ 127 (264)
+.++|-.++|+.+ ...+|..+|.|++|...+.+|+..|..+++++...+........
T Consensus 104 ~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d~ 165 (563)
T COG2936 104 REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRDD 165 (563)
T ss_pred ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccccccc
Confidence 2444444444444 23589999999999999999999998899998888765533333
No 149
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.97 E-value=2.2e-08 Score=72.15 Aligned_cols=120 Identities=16% Similarity=0.096 Sum_probs=82.7
Q ss_pred CCcceeeEEEEeCC--CCceEEEecCCCCChhhHHHhh--hhc---CCceEEEecCC-------CCCCCCCCCCCCcccc
Q 024681 2 GDLLEALHVRVVGT--GDRILVLAHGFGTDQSAWQRIL--PYL---NHHRVIMFDLV-------CAGSVNPDYFDFRRYT 67 (264)
Q Consensus 2 g~~~~~~~~~~~g~--~~p~vv~~hG~~~~~~~~~~~~--~~l---~g~~v~~~d~~-------g~G~s~~~~~~~~~~~ 67 (264)
|.-.....|...+. +.|.||.+||-.++...+.... ..| .||-|+.+|-- +.+.+..+........
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~d 123 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVD 123 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCcc
Confidence 34444555555554 4579999999999988777665 455 79999999532 1222211111122223
Q ss_pred hHHHHHHHHHHHHHHhCCC--eEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 68 TLDAYVDDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+...+.+-+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 124 dVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 124 DVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 3555555566666666775 89999999999999999999999999999888754
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.94 E-value=1.7e-07 Score=65.92 Aligned_cols=102 Identities=18% Similarity=0.171 Sum_probs=70.5
Q ss_pred eEEEecCCCCChhhHHHhhhhc-CCc------eEEEecCCCC----CCCCCCCCCC-------cccchHHHHHHHHHHHH
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL-NHH------RVIMFDLVCA----GSVNPDYFDF-------RRYTTLDAYVDDLLNIL 80 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l-~g~------~v~~~d~~g~----G~s~~~~~~~-------~~~~~~~~~~~~~~~~~ 80 (264)
|.||+||.+++......++..| ..+ -++.+|--|. |.=+.....+ .+-.+..++...+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 7899999999999999999888 444 3556666552 1111110000 01124556677777766
Q ss_pred HHh----CCCeEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCC
Q 024681 81 DTL----GVNRCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGAS 120 (264)
Q Consensus 81 ~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~ 120 (264)
..| +++++.++||||||.-...++..+.. .++.+|.++++
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 666 67899999999999999888876532 58899999875
No 151
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.94 E-value=2.9e-08 Score=70.96 Aligned_cols=84 Identities=13% Similarity=0.245 Sum_probs=49.6
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-C---CceEEEecCCCCCCCCCCCCCCcccchHHHH----HHHHHHHHHHhCC--C
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-N---HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAY----VDDLLNILDTLGV--N 86 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-~---g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~ 86 (264)
.-.||++||+.++...|..+...+ . .+.-..+...++...... .+.+++.. ++.+.+.++.... .
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~-----T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK-----TFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc-----cchhhHHHHHHHHHHHHHhccccccccc
Confidence 348999999999999998777766 3 332222222222111111 11124444 4444444444443 4
Q ss_pred eEEEEecChhHHHHHHHHH
Q 024681 87 RCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~ 105 (264)
++++|||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999999865544
No 152
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.91 E-value=1.9e-08 Score=72.82 Aligned_cols=173 Identities=14% Similarity=0.128 Sum_probs=106.0
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCC-----C--CCC-Cccc-------------c----h
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNP-----D--YFD-FRRY-------------T----T 68 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~-----~--~~~-~~~~-------------~----~ 68 (264)
+=|+|||-||++++...|..+.-.| .||-|.+++.|-+-.+.. . ... ...+ . .
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 3389999999999999999999999 999999999987643310 0 000 0000 0 0
Q ss_pred HHHHHHHHH---HHHHHh------------------------CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 69 LDAYVDDLL---NILDTL------------------------GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 69 ~~~~~~~~~---~~~~~~------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
...-++.+. .+++.+ +-.++.++|||+||..++...+.+. .+++.|++++.-
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM 275 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeee
Confidence 111111111 222222 1126789999999999988777654 588888888620
Q ss_pred CCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccC
Q 024681 122 RFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILG 201 (264)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (264)
. .+. ....+
T Consensus 276 ~--------------------------------Pl~---------------------------------------~~~~~ 284 (399)
T KOG3847|consen 276 F--------------------------------PLD---------------------------------------QLQYS 284 (399)
T ss_pred c--------------------------------ccc---------------------------------------hhhhh
Confidence 0 000 01123
Q ss_pred CcccCEEEEecCCCCCcchhhHHHHHHHcCCC--ceEEEecCCCCcccccChhcHHHHHHHHh
Q 024681 202 LVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR--NTVELLKIEGHLPHLSAPAIVGPVIRRAL 262 (264)
Q Consensus 202 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 262 (264)
+.+.|+++|.-+ .+--.+....+.+..++. ..+..+.|+=|..+-+-|=.+-..|.+++
T Consensus 285 ~arqP~~finv~--~fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f 345 (399)
T KOG3847|consen 285 QARQPTLFINVE--DFQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVF 345 (399)
T ss_pred hccCCeEEEEcc--cccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHh
Confidence 457799999833 233345555555555433 56778888889777666655555555554
No 153
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.90 E-value=2.1e-08 Score=72.21 Aligned_cols=102 Identities=24% Similarity=0.302 Sum_probs=65.8
Q ss_pred CCceEEEecCCCCChhhHHH----hhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCC
Q 024681 16 GDRILVLAHGFGTDQSAWQR----ILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVN 86 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~----~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 86 (264)
.+..+||+||+..+...-.. +...+ ....++.+.||..|.-.. +..... +...-..++..+++.+ +.+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~--Y~~d~~-~a~~s~~~l~~~L~~L~~~~~~~ 93 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLG--YFYDRE-SARFSGPALARFLRDLARAPGIK 93 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhh--hhhhhh-hHHHHHHHHHHHHHHHHhccCCc
Confidence 45699999999988654322 33333 233899999998876321 111111 2334444555555544 567
Q ss_pred eEEEEecChhHHHHHHHHHh----CC-----CccceeEEecCC
Q 024681 87 RCAYVGHSVSAMIGLLASIR----RP-----DLFTKLILIGAS 120 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~----~p-----~~v~~~vl~~~~ 120 (264)
+|++++||||+.+.+.+... .+ .++..+++++|-
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 99999999999998876543 21 267888999874
No 154
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.90 E-value=4.1e-08 Score=77.17 Aligned_cols=158 Identities=13% Similarity=0.086 Sum_probs=104.7
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc----CCceEEEecCCCC-CCCCCCCCCCcccchHHHHHHHHHHHHHH-----
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL----NHHRVIMFDLVCA-GSVNPDYFDFRRYTTLDAYVDDLLNILDT----- 82 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l----~g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----- 82 (264)
..|.++++||.+ ..++.+..+...| +-..+-++|++.- |. . ++...++.+..+.+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG----------~-nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG----------A-NIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC----------c-chHHHHHHHHHHhhhhhhhh
Confidence 347899999977 1222222333333 5566777887632 21 1 355556655555542
Q ss_pred ---hCCCeEEEEecChhHHHHHHHHHhCC-CccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccc
Q 024681 83 ---LGVNRCAYVGHSVSAMIGLLASIRRP-DLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAP 158 (264)
Q Consensus 83 ---~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (264)
+...+++|+|.|||+.++.+.+.... ..|+++|+++-+........
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------------------ 293 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------------------ 293 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc------------------------------
Confidence 23458999999999999888776543 34888888875322110000
Q ss_pred ccCCCCChHHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEE
Q 024681 159 LAVGADVPAAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVEL 238 (264)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 238 (264)
....+.+-.++.|+|++.|..|..++++..+.+++++....++++
T Consensus 294 -----------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhV 338 (784)
T KOG3253|consen 294 -----------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHV 338 (784)
T ss_pred -----------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEE
Confidence 011122344688999999999999999999999999987689999
Q ss_pred ecCCCCccccc
Q 024681 239 LKIEGHLPHLS 249 (264)
Q Consensus 239 ~~~~gH~~~~~ 249 (264)
+.+++|.+-..
T Consensus 339 I~~adhsmaip 349 (784)
T KOG3253|consen 339 IGGADHSMAIP 349 (784)
T ss_pred ecCCCccccCC
Confidence 99999965543
No 155
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.89 E-value=4.4e-07 Score=71.00 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=62.1
Q ss_pred CCceEEEecCCCCChh-hHHHhhhhc--CC----ceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-----
Q 024681 16 GDRILVLAHGFGTDQS-AWQRILPYL--NH----HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----- 83 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~-~~~~~~~~l--~g----~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 83 (264)
.-|+|+++||-..... .....+..| .| ..++.+|..+.. .......... .-...+++++.-.++..
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~-~R~~el~~~~-~f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT-HRSQELPCNA-DFWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc-cccccCCchH-HHHHHHHHHHHHHHHHhCCCCC
Confidence 3489999999432111 111223333 33 456777753211 1111011111 11344556666666653
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
+.++.+|+|+||||..|+.++.++|+.+.+++.+++.
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 3357899999999999999999999999999999985
No 156
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.89 E-value=2.3e-07 Score=64.90 Aligned_cols=81 Identities=21% Similarity=0.307 Sum_probs=55.4
Q ss_pred CceEEEecCCCCChhhHHHhhhhcCCceE-EEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecCh
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYLNHHRV-IMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSV 95 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l~g~~v-~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 95 (264)
+..|||+.|+|.+...+..+... .++.+ +++|+|..- ++. | -.+.+++.|||+||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~~-~~~D~l~~yDYr~l~--------------~d~---~------~~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLILP-ENYDVLICYDYRDLD--------------FDF---D------LSGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhccCC-CCccEEEEecCcccc--------------ccc---c------cccCceEEEEEEeH
Confidence 45999999999999888766421 34444 567776221 110 1 12357999999999
Q ss_pred hHHHHHHHHHhCCCccceeEEecCCCCC
Q 024681 96 SAMIGLLASIRRPDLFTKLILIGASPRF 123 (264)
Q Consensus 96 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 123 (264)
|-++|..+....| ++..|.+++.+..
T Consensus 67 GVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEECCCCC
Confidence 9999988766543 6777888876543
No 157
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.86 E-value=2.9e-07 Score=65.21 Aligned_cols=228 Identities=16% Similarity=0.185 Sum_probs=117.6
Q ss_pred ceEEEecCCCCChhhHH-Hhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHH----HHHH---------
Q 024681 18 RILVLAHGFGTDQSAWQ-RILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLL----NILD--------- 81 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~-~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~----~~~~--------- 81 (264)
+.-+.+-|.|.+...-+ .+...+ ++...+.+.-|-||...+. ..+...-+.+.|+. +.|+
T Consensus 114 ~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~----~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws 189 (371)
T KOG1551|consen 114 DLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPE----EQIIHMLEYVTDLFKMGRATIQEFVKLFTWS 189 (371)
T ss_pred CeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCH----HHHHHHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence 34444445555443222 233333 8899999999999988653 22211222223321 1222
Q ss_pred -HhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhccccc
Q 024681 82 -TLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLA 160 (264)
Q Consensus 82 -~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
..|..++.++|-||||.+|......++..|+-+=++++..... .+..+ ++.......+++........
T Consensus 190 ~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asv---s~teg--------~l~~~~s~~~~~~~~t~~~~ 258 (371)
T KOG1551|consen 190 SADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASV---SATEG--------LLLQDTSKMKRFNQTTNKSG 258 (371)
T ss_pred cccCcccceeeeeecccHHHHhhcccCCCCccccccccccccch---hhhhh--------hhhhhhHHHHhhccCcchhh
Confidence 1256799999999999999999998877666555555432111 01000 00000000000000000000
Q ss_pred CCCCCh-HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCCcccC-----EEEEecCCCCCcchhhHHHHHHHcCCCc
Q 024681 161 VGADVP-AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGLVRVP-----CVIIQTSKDVSVPVSVAEYLQRHLGGRN 234 (264)
Q Consensus 161 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 234 (264)
.....+ +......+............+++.... +. ..+.+..+| +.++.+++|..+|......+.+..|+ +
T Consensus 259 ~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd-~~-T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg-~ 335 (371)
T KOG1551|consen 259 YTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMD-EC-THVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPG-C 335 (371)
T ss_pred hhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHH-hh-chhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCC-C
Confidence 000000 000000111111111222222222211 00 112222222 56778999999999999999999999 8
Q ss_pred eEEEecCCCCc-ccccChhcHHHHHHHHhcC
Q 024681 235 TVELLKIEGHL-PHLSAPAIVGPVIRRALSR 264 (264)
Q Consensus 235 ~~~~~~~~gH~-~~~~~~~~~~~~i~~fl~~ 264 (264)
++..++ +||. ..+-+.+.+.+.|.+-|++
T Consensus 336 eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 336 EVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 999999 8994 5566778898988887753
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=98.76 E-value=1.7e-07 Score=61.61 Aligned_cols=86 Identities=15% Similarity=0.271 Sum_probs=61.2
Q ss_pred EEEecCCCCChhhHHHhh--hhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 20 LVLAHGFGTDQSAWQRIL--PYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 20 vv~~hG~~~~~~~~~~~~--~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
||++|||.++........ +++ ....-+. .|.+.. . . +....++.+..++...+.+...|+|-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~-------y~~p~l---~-h-~p~~a~~ele~~i~~~~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIE-------YSTPHL---P-H-DPQQALKELEKAVQELGDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcccccee-------eecCCC---C-C-CHHHHHHHHHHHHHHcCCCCceEEeecch
Confidence 799999999888776533 233 3322222 222210 0 1 48889999999999998788999999999
Q ss_pred HHHHHHHHHhCCCccceeEEecCC
Q 024681 97 AMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 97 g~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
|+.|..++.++. ++ .|+++|+
T Consensus 70 GY~At~l~~~~G--ir-av~~NPa 90 (191)
T COG3150 70 GYYATWLGFLCG--IR-AVVFNPA 90 (191)
T ss_pred HHHHHHHHHHhC--Ch-hhhcCCC
Confidence 999999999875 33 4556764
No 159
>PLN02606 palmitoyl-protein thioesterase
Probab=98.76 E-value=8.4e-07 Score=65.03 Aligned_cols=97 Identities=13% Similarity=0.161 Sum_probs=62.2
Q ss_pred CceEEEecCCC--CChhhHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hCCCeE
Q 024681 17 DRILVLAHGFG--TDQSAWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LGVNRC 88 (264)
Q Consensus 17 ~p~vv~~hG~~--~~~~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 88 (264)
..|||+.||++ ++...+..+.+.+ .++.+..+. .|-+..+ .-+..+.+.++.+.+-+.. +. +-+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~------s~~~~~~~Qv~~vce~l~~~~~L~-~G~ 97 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD------SLFMPLRQQASIACEKIKQMKELS-EGY 97 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc------ccccCHHHHHHHHHHHHhcchhhc-Cce
Confidence 45899999999 5555666666655 255444443 2222210 1111244444444433333 22 469
Q ss_pred EEEecChhHHHHHHHHHhCCC--ccceeEEecCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRPD--LFTKLILIGASP 121 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~ 121 (264)
+++|+|.||.++-.++.+.|+ .|+.+|.++++.
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999999999987 599999999863
No 160
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.74 E-value=4.8e-08 Score=74.44 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=78.8
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCce---EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEec
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHR---VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGH 93 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 93 (264)
++|++||++.+...|..+...+ .|+. ++.++.++..... ......+++...+.+++...+.+++.|+||
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~~ql~~~V~~~l~~~ga~~v~LigH 134 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTY------SLAVRGEQLFAYVDEVLAKTGAKKVNLIGH 134 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCc------cccccHHHHHHHHHHHHhhcCCCceEEEee
Confidence 8999999988888888888777 6776 8888887651111 111247778888888888888899999999
Q ss_pred ChhHHHHHHHHHhCC--CccceeEEecCCC
Q 024681 94 SVSAMIGLLASIRRP--DLFTKLILIGASP 121 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~ 121 (264)
||||.++..++...+ .+|+.++.++++-
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 999999999999888 7899999999864
No 161
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.70 E-value=1.6e-06 Score=63.38 Aligned_cols=60 Identities=17% Similarity=0.176 Sum_probs=49.2
Q ss_pred cccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecCCCCcccc-cChhcHHHHHHHHh
Q 024681 203 VRVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKIEGHLPHL-SAPAIVGPVIRRAL 262 (264)
Q Consensus 203 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 262 (264)
..+|-++++++.|.+++.+..++..+..... ++...++++.|..+. ++|++..+.+.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4689999999999999998888776655332 677788999997665 57999999999885
No 162
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.66 E-value=1.1e-06 Score=60.77 Aligned_cols=93 Identities=20% Similarity=0.244 Sum_probs=70.0
Q ss_pred ceEEEecCCCCChh---hHHHhhhhc--CCceEEEecCCC----CCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC---
Q 024681 18 RILVLAHGFGTDQS---AWQRILPYL--NHHRVIMFDLVC----AGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV--- 85 (264)
Q Consensus 18 p~vv~~hG~~~~~~---~~~~~~~~l--~g~~v~~~d~~g----~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 85 (264)
..|||+-|++..-. .-..+...| .+|.++-+.++. +|.+ ++.+-++|+..++++++.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~-----------slk~D~edl~~l~~Hi~~~~f 105 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF-----------SLKDDVEDLKCLLEHIQLCGF 105 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc-----------cccccHHHHHHHHHHhhccCc
Confidence 47899999887543 345677777 899999888763 3322 477888999999998743
Q ss_pred -CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 86 -NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 86 -~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
+.|+|+|||.|..=.+.+... .|..+.+.|+.+|..
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 489999999999888877732 456688888888754
No 163
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.65 E-value=4.5e-07 Score=72.20 Aligned_cols=106 Identities=19% Similarity=0.213 Sum_probs=68.4
Q ss_pred CCceEEEecCCCCChhhH--HHhhhhc---CCceEEEecCCCCCCCCCCC---CCCcccchHHHHHHHHHHHHHHhC---
Q 024681 16 GDRILVLAHGFGTDQSAW--QRILPYL---NHHRVIMFDLVCAGSVNPDY---FDFRRYTTLDAYVDDLLNILDTLG--- 84 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~--~~~~~~l---~g~~v~~~d~~g~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--- 84 (264)
+.|++|++-|-+.-...+ ..+...| -|-.++++++|-+|.|.|.. .+.-.|.+.++..+|+..+++.+.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 456666665543322222 2234444 47789999999999997631 122356679999999999988763
Q ss_pred ----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 85 ----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 85 ----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
..|++++|-|+||.+|..+-.++|+.|.+.+..+++.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 2389999999999999999999999999988887754
No 164
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.63 E-value=6.5e-06 Score=62.60 Aligned_cols=105 Identities=18% Similarity=0.148 Sum_probs=68.7
Q ss_pred CCceEEEecCCCCCh----hhHHH---hhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeE
Q 024681 16 GDRILVLAHGFGTDQ----SAWQR---ILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRC 88 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~----~~~~~---~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (264)
..|+||++||.|-.- ..... +...|....+++.|+.-...-... ..-+. .+.+.++-...+++..+.+++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~--~~yPt-QL~qlv~~Y~~Lv~~~G~~nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHG--HKYPT-QLRQLVATYDYLVESEGNKNI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCC--CcCch-HHHHHHHHHHHHHhccCCCeE
Confidence 358999999976432 22222 222335668999998654300000 01112 377777777888877788999
Q ss_pred EEEecChhHHHHHHHHHhCC-----CccceeEEecCCCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRP-----DLFTKLILIGASPRF 123 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~ 123 (264)
+|+|-|.||.+++.+..... ...+++|+++|....
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 99999999999987765321 236899999996443
No 165
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.63 E-value=1.2e-05 Score=60.60 Aligned_cols=104 Identities=12% Similarity=0.106 Sum_probs=66.8
Q ss_pred CceEEEecCCCCChh---hHHHhhhhc--CCceEEEecCCCC--CCCCC----------CC---CCCc------------
Q 024681 17 DRILVLAHGFGTDQS---AWQRILPYL--NHHRVIMFDLVCA--GSVNP----------DY---FDFR------------ 64 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~---~~~~~~~~l--~g~~v~~~d~~g~--G~s~~----------~~---~~~~------------ 64 (264)
...||++||.+.+.. ....+...| .|++++++.+|.- ..... .. ....
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 359999999998864 345666778 8999999999871 10000 00 0000
Q ss_pred -cc-chHHHHHHHHHHHHH---HhCCCeEEEEecChhHHHHHHHHHhCCC-ccceeEEecCC
Q 024681 65 -RY-TTLDAYVDDLLNILD---TLGVNRCAYVGHSVSAMIGLLASIRRPD-LFTKLILIGAS 120 (264)
Q Consensus 65 -~~-~~~~~~~~~~~~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~ 120 (264)
.+ ..-+.+..-+.+.+. ..+..+++|+||+.|+..++.+....+. .++++|++++.
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 00 001222223333333 3355679999999999999999888764 58999999984
No 166
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.55 E-value=1.7e-06 Score=65.97 Aligned_cols=148 Identities=12% Similarity=0.142 Sum_probs=90.7
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGA 163 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
.++++++.|.|==|+.++..|+ ..+||++++-+.-... .....+......... .|...+.+.
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~L----------N~~~~l~h~y~~yG~---~ws~a~~dY---- 231 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVL----------NMKANLEHQYRSYGG---NWSFAFQDY---- 231 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccC----------CcHHHHHHHHHHhCC---CCccchhhh----
Confidence 5689999999999999999998 5568888876654211 011122222222110 121111110
Q ss_pred CChHHHHHHHHh-hcccCchhhhhhhhhhcCCccccccCCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCC
Q 024681 164 DVPAAVREFSRT-LFNMRPDISLFVSKTVFDTDLRGILGLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242 (264)
Q Consensus 164 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (264)
+... ....+......+........+ ..++++|-++|.|..|.+..++....+.+.+++.+.+..+||+
T Consensus 232 --------~~~gi~~~l~tp~f~~L~~ivDP~~Y---~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~ 300 (367)
T PF10142_consen 232 --------YNEGITQQLDTPEFDKLMQIVDPYSY---RDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNA 300 (367)
T ss_pred --------hHhCchhhcCCHHHHHHHHhcCHHHH---HHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCC
Confidence 0000 111122222222222222222 3456899999999999999999999999999987889999999
Q ss_pred CCcccccChhcHHHHHHHHhc
Q 024681 243 GHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 243 gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+|.... ..+.+.+..|+.
T Consensus 301 ~H~~~~---~~~~~~l~~f~~ 318 (367)
T PF10142_consen 301 GHSLIG---SDVVQSLRAFYN 318 (367)
T ss_pred Ccccch---HHHHHHHHHHHH
Confidence 998765 555666666653
No 167
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.51 E-value=3.1e-06 Score=63.91 Aligned_cols=69 Identities=17% Similarity=0.185 Sum_probs=53.1
Q ss_pred cccccCCcc-cCEEEEecCCCCCcchhhHHHHHHHcCC-CceEEEecCCCCcccccChh---cHHHHHHHHhcC
Q 024681 196 LRGILGLVR-VPCVIIQTSKDVSVPVSVAEYLQRHLGG-RNTVELLKIEGHLPHLSAPA---IVGPVIRRALSR 264 (264)
Q Consensus 196 ~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~ 264 (264)
....+.++. .|+++++|..|..+|......+.+.... ..+...+++++|........ +..+.+.+|+.+
T Consensus 223 ~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 223 PFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred chhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 334444555 7999999999999999999998888776 46788889999987754433 677788888753
No 168
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.47 E-value=7.5e-07 Score=65.62 Aligned_cols=50 Identities=26% Similarity=0.477 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHh-CC--CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 71 AYVDDLLNILDTL-GV--NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 71 ~~~~~~~~~~~~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
-+.++|...++.. .. ++..++|+||||..|+.++.++|+.+.+++++++.
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 3455666666554 22 23799999999999999999999999999999975
No 169
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.47 E-value=8.9e-07 Score=55.14 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=52.1
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
..|+|++.++.|+.+|.+.++.+++.+++ ++++.+++.||........-+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 58999999999999999999999999999 899999999998876444556788888875
No 170
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.45 E-value=6.5e-06 Score=58.73 Aligned_cols=95 Identities=16% Similarity=0.166 Sum_probs=66.6
Q ss_pred ceEEEecCCCCChhh--HHHhhhhc---CCceEEEecCCCCC--CCCCCCCCCcccchHHHHHHHHHHHHHHhC--CCeE
Q 024681 18 RILVLAHGFGTDQSA--WQRILPYL---NHHRVIMFDLVCAG--SVNPDYFDFRRYTTLDAYVDDLLNILDTLG--VNRC 88 (264)
Q Consensus 18 p~vv~~hG~~~~~~~--~~~~~~~l---~g~~v~~~d~~g~G--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 88 (264)
.|+|++||++.+... ...+.+.+ .|..|++.|. |-| .|.- ..+.+.++.+.+.+.... .+-+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l--------~pl~~Qv~~~ce~v~~m~~lsqGy 94 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSL--------MPLWEQVDVACEKVKQMPELSQGY 94 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhh--------ccHHHHHHHHHHHHhcchhccCce
Confidence 489999999987765 66677766 7889999986 444 2211 124444444444444221 2569
Q ss_pred EEEecChhHHHHHHHHHhCCC-ccceeEEecCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRPD-LFTKLILIGASP 121 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 121 (264)
.++|.|.||.++-.++...++ .|+..|.++++.
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999999999999988764 588899888753
No 171
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.44 E-value=2.4e-06 Score=63.74 Aligned_cols=103 Identities=21% Similarity=0.254 Sum_probs=65.7
Q ss_pred CCCceEEEecCCCCChhh-HH---Hhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CC
Q 024681 15 TGDRILVLAHGFGTDQSA-WQ---RILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GV 85 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~-~~---~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 85 (264)
.++..+||+||+..+-+. -. .+.... .....+.+.||..|.--.-..|. - +...-..+++.+++.+ ..
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~Dr--e-S~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDR--E-STNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccch--h-hhhhhHHHHHHHHHHHHhCCCC
Confidence 345699999998766432 22 233344 56677888998776542111111 1 2344455566666555 46
Q ss_pred CeEEEEecChhHHHHHHHHHh--------CCCccceeEEecCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIR--------RPDLFTKLILIGAS 120 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~ 120 (264)
++|+|++||||.++++....+ .+.+++-+|+-+|-
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 789999999999999887654 23467778888763
No 172
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.42 E-value=2.6e-06 Score=58.46 Aligned_cols=105 Identities=16% Similarity=0.235 Sum_probs=67.8
Q ss_pred CceEEEecCCCCChhhHHH---hhhhc--CCceEEEecCCCCCCCC---CCCCCC------------c----ccchHHHH
Q 024681 17 DRILVLAHGFGTDQSAWQR---ILPYL--NHHRVIMFDLVCAGSVN---PDYFDF------------R----RYTTLDAY 72 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~---~~~~l--~g~~v~~~d~~g~G~s~---~~~~~~------------~----~~~~~~~~ 72 (264)
-|++.++-|+.++.+.+.. +.+.- .|+.|+.+|---.|..- ....+. + .|.-.+-+
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 4899999999998877642 22233 79999999974333220 001111 1 12211223
Q ss_pred HHHHHHHHHHh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 73 VDDLLNILDTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 73 ~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.+.+.++++.. +..++.+.||||||.=|+..+.+.|.+.+++-..+|..
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 34444555422 23479999999999999999999999999888888753
No 173
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.38 E-value=2.2e-05 Score=57.85 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=62.5
Q ss_pred ceEEEecCCCCChh--hHHHhhhhc---CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHH---hCCCeEE
Q 024681 18 RILVLAHGFGTDQS--AWQRILPYL---NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDT---LGVNRCA 89 (264)
Q Consensus 18 p~vv~~hG~~~~~~--~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 89 (264)
.|+|+.||+|.+.. ....+.+.+ .|..+.++.. |.+... .-+..+.+.++.+.+-+.. +. +-++
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~----s~~~~~~~Qve~vce~l~~~~~l~-~G~n 97 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGD----SWLMPLTQQAEIACEKVKQMKELS-QGYN 97 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccc----cceeCHHHHHHHHHHHHhhchhhh-CcEE
Confidence 48999999987643 334444444 5666666654 332211 1111244444444444333 32 4699
Q ss_pred EEecChhHHHHHHHHHhCCC--ccceeEEecCCC
Q 024681 90 YVGHSVSAMIGLLASIRRPD--LFTKLILIGASP 121 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~ 121 (264)
++|+|.||.++-.++.+.|+ .|+.+|.++++.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999999987 599999999863
No 174
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.38 E-value=6.5e-06 Score=62.37 Aligned_cols=107 Identities=15% Similarity=0.150 Sum_probs=78.6
Q ss_pred CCCCceEEEecCCCCChhhHHH---hhhhc---CCceEEEecCCCCCCCCCCCC------CCcccchHHHHHHHHHHHHH
Q 024681 14 GTGDRILVLAHGFGTDQSAWQR---ILPYL---NHHRVIMFDLVCAGSVNPDYF------DFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~~~~~---~~~~l---~g~~v~~~d~~g~G~s~~~~~------~~~~~~~~~~~~~~~~~~~~ 81 (264)
..++.||+|.-|.-++-+.|.. ++-.+ .+--++..++|-+|+|-|-.. ..-.|.+.++..+|..+++.
T Consensus 77 ~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 77 KKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred cCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 3443589999998888876643 33333 466788999999999965211 11245567777888888887
Q ss_pred HhC------CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 82 TLG------VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 82 ~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+. ..+|+.+|.|+||++|..+-.++|..+.+...-+++
T Consensus 157 ~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 157 FLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 773 248999999999999999999999988876655554
No 175
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.31 E-value=4.8e-06 Score=60.67 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=54.1
Q ss_pred CceEEEecCCCCCh---hhHH---Hhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC--CCe
Q 024681 17 DRILVLAHGFGTDQ---SAWQ---RILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG--VNR 87 (264)
Q Consensus 17 ~p~vv~~hG~~~~~---~~~~---~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 87 (264)
..|||+.||+|.+. ..+. .+++.. .|.-|..++. |-+.++.. ...-+.++.+.++.+.+.+.... .+-
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~--~~s~f~~v~~Qv~~vc~~l~~~p~L~~G 81 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDV--ENSFFGNVNDQVEQVCEQLANDPELANG 81 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHH--HHHHHSHHHHHHHHHHHHHHH-GGGTT-
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhh--hhhHHHHHHHHHHHHHHHHhhChhhhcc
Confidence 35899999999643 2344 344444 7888888886 22211100 00111234555555555554421 157
Q ss_pred EEEEecChhHHHHHHHHHhCCC-ccceeEEecCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRPD-LFTKLILIGASP 121 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 121 (264)
++++|+|.||.++-.++.++|+ .|+.+|.++++.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999875 699999999863
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.28 E-value=1.7e-05 Score=64.91 Aligned_cols=96 Identities=10% Similarity=0.088 Sum_probs=59.6
Q ss_pred ceEEEecCCCCChhhHHHhhhh-----------------c-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHH
Q 024681 18 RILVLAHGFGTDQSAWQRILPY-----------------L-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNI 79 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~-----------------l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~ 79 (264)
-||+|++|..++...-+.++.. . ..|+..++|+-+- .| ...+. ++.+.++.+.+.
T Consensus 90 IPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-~t-----Am~G~-~l~dQtEYV~dA 162 (973)
T KOG3724|consen 90 IPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-FT-----AMHGH-ILLDQTEYVNDA 162 (973)
T ss_pred ceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-hh-----hhccH-hHHHHHHHHHHH
Confidence 3899999999987766554431 1 3566677775320 00 01111 466667666666
Q ss_pred HHHh-----C--------CCeEEEEecChhHHHHHHHHHh---CCCccceeEEecCC
Q 024681 80 LDTL-----G--------VNRCAYVGHSVSAMIGLLASIR---RPDLFTKLILIGAS 120 (264)
Q Consensus 80 ~~~~-----~--------~~~~~l~G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~ 120 (264)
++.. + ...|+|+||||||.+|...+.. .++.|+-++..+++
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 6543 2 2359999999999999877653 23456666666654
No 177
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.23 E-value=0.00044 Score=54.80 Aligned_cols=59 Identities=22% Similarity=0.284 Sum_probs=47.3
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcC------------C------------CceEEEecCCCCcccccChhcHHHHHH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLG------------G------------RNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------~------------~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
.++||+..|+.|.+++.-..+.+.+.+. + ..+++.+-++||+++ .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999999877777766552 1 034566778999996 58999999999
Q ss_pred HHhc
Q 024681 260 RALS 263 (264)
Q Consensus 260 ~fl~ 263 (264)
+|+.
T Consensus 426 ~Fi~ 429 (433)
T PLN03016 426 RWIS 429 (433)
T ss_pred HHHc
Confidence 9985
No 178
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.21 E-value=8.4e-06 Score=66.26 Aligned_cols=102 Identities=18% Similarity=0.073 Sum_probs=61.3
Q ss_pred CCceEEEecCCCC---ChhhHHHhhhhc---CC-ceEEEecCC----CCCCCCCCCCCCcccchHHHHHH---HHHHHHH
Q 024681 16 GDRILVLAHGFGT---DQSAWQRILPYL---NH-HRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVD---DLLNILD 81 (264)
Q Consensus 16 ~~p~vv~~hG~~~---~~~~~~~~~~~l---~g-~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~---~~~~~~~ 81 (264)
..|+||++||.+. +...+ ....| .+ +.|+++++| |+..+... ....++. +.|... .+.+-++
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~~~~n~g-~~D~~~al~wv~~~i~ 169 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-ELPGNYG-LKDQRLALKWVQDNIA 169 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC-CCCcchh-HHHHHHHHHHHHHHHH
Confidence 4589999999542 22222 12223 33 899999999 33332211 1112222 334333 3344444
Q ss_pred HhC--CCeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 82 TLG--VNRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 82 ~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
..+ .++|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 170 ~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 170 AFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 444 3589999999999998877765 235688888888754
No 179
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.19 E-value=0.0001 Score=56.50 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=30.1
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
|++++|+|.||++|..+|.-.|..+++++=-++.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 8999999999999999999999988888766553
No 180
>PLN02209 serine carboxypeptidase
Probab=98.15 E-value=0.00069 Score=53.78 Aligned_cols=59 Identities=19% Similarity=0.260 Sum_probs=47.3
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcCC------------------------CceEEEecCCCCcccccChhcHHHHHH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGG------------------------RNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
.++||+..|+.|.+++.-..+.+.+.++- ..+++.+-+|||++. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 47999999999999998777777765530 034556778999996 69999999999
Q ss_pred HHhc
Q 024681 260 RALS 263 (264)
Q Consensus 260 ~fl~ 263 (264)
+|+.
T Consensus 430 ~fi~ 433 (437)
T PLN02209 430 RWIS 433 (437)
T ss_pred HHHc
Confidence 9985
No 181
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.15 E-value=0.0017 Score=51.44 Aligned_cols=59 Identities=19% Similarity=0.212 Sum_probs=47.3
Q ss_pred cCEEEEecCCCCCcchhhHHHHHHHcCC--------------C----------ceEEEecCCCCcccccChhcHHHHHHH
Q 024681 205 VPCVIIQTSKDVSVPVSVAEYLQRHLGG--------------R----------NTVELLKIEGHLPHLSAPAIVGPVIRR 260 (264)
Q Consensus 205 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~--------------~----------~~~~~~~~~gH~~~~~~~~~~~~~i~~ 260 (264)
.++++..|+.|.++|.-..+.+.+.+.- . ..+..+.|+||++..++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999998777766544310 0 234677899999999999999999999
Q ss_pred Hhc
Q 024681 261 ALS 263 (264)
Q Consensus 261 fl~ 263 (264)
||.
T Consensus 444 fl~ 446 (454)
T KOG1282|consen 444 FLN 446 (454)
T ss_pred HHc
Confidence 985
No 182
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.13 E-value=5.6e-05 Score=60.67 Aligned_cols=105 Identities=13% Similarity=0.135 Sum_probs=69.5
Q ss_pred CCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCc----ccchHHHHHHHHHHHHHHh--CC
Q 024681 16 GDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFR----RYTTLDAYVDDLLNILDTL--GV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~ 85 (264)
.+|.+|..+|.-+-. ..|+.-...| .|+.....|.||=|+-.......+ ..++++++....+.+++.- ..
T Consensus 469 ~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~ 548 (712)
T KOG2237|consen 469 SKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQP 548 (712)
T ss_pred CCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCc
Confidence 347677666633322 2343333333 899999999999776533221111 2224666666555555432 34
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+..+.|.|.||.++-++..++|+.+.++|+-.|.
T Consensus 549 ~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 549 SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred cceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 68999999999999999999999999998887774
No 183
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.05 E-value=0.00021 Score=57.83 Aligned_cols=107 Identities=14% Similarity=0.207 Sum_probs=72.6
Q ss_pred CCceEEEecCCCCCh--hhHH-Hhhhhc-CCceEEEecCCCCCCCCCCCCC----CcccchHHHHHHHHHHHHHHh--CC
Q 024681 16 GDRILVLAHGFGTDQ--SAWQ-RILPYL-NHHRVIMFDLVCAGSVNPDYFD----FRRYTTLDAYVDDLLNILDTL--GV 85 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~-~~~~~l-~g~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~ 85 (264)
..|.++..-|.-+.+ ..|. .....| +|+--...--||=|+-....+. ...-+++.++++....+++.- ..
T Consensus 447 ~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~ 526 (682)
T COG1770 447 SAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSP 526 (682)
T ss_pred CCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCc
Confidence 346777776643332 2233 233344 8988777778887665332111 122236788887777777653 33
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+.++++|-|.||++.-..+...|+.++++|+--|...
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 5899999999999999999999999999999888644
No 184
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.05 E-value=0.00069 Score=51.73 Aligned_cols=59 Identities=22% Similarity=0.284 Sum_probs=47.0
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcC------------C------------CceEEEecCCCCcccccChhcHHHHHH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLG------------G------------RNTVELLKIEGHLPHLSAPAIVGPVIR 259 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------~------------~~~~~~~~~~gH~~~~~~~~~~~~~i~ 259 (264)
.++||+..|+.|.+++.-..+.+.+.+. + ..+++.+-++||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999999999877777766653 1 034555668999996 59999999999
Q ss_pred HHhc
Q 024681 260 RALS 263 (264)
Q Consensus 260 ~fl~ 263 (264)
+|+.
T Consensus 312 ~fi~ 315 (319)
T PLN02213 312 RWIS 315 (319)
T ss_pred HHHc
Confidence 9985
No 185
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.98 E-value=0.0022 Score=50.67 Aligned_cols=102 Identities=9% Similarity=0.033 Sum_probs=65.5
Q ss_pred CCceEEEecCCCCChhhHHHhhh----hc----------------CCceEEEecC-CCCCCCCCCCCCCcccchHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILP----YL----------------NHHRVIMFDL-VCAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~----~l----------------~g~~v~~~d~-~g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
.+|.++++.|.++++..+-.+.+ .+ ..-.++.+|+ -|.|.|.... .+.-.++....+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~--~e~~~d~~~~~~ 177 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALG--DEKKKDFEGAGK 177 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccc--cccccchhccch
Confidence 36899999999999988866533 11 2347899995 4888886311 111123555555
Q ss_pred HHHHHHHHh-------C--CCeEEEEecChhHHHHHHHHHhCCC---ccceeEEecC
Q 024681 75 DLLNILDTL-------G--VNRCAYVGHSVSAMIGLLASIRRPD---LFTKLILIGA 119 (264)
Q Consensus 75 ~~~~~~~~~-------~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~ 119 (264)
|+..+.+.. . ..+.+|+|-|+||.-+-.+|...-+ ..++++++.+
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlss 234 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSS 234 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeee
Confidence 555444322 2 2489999999999888777765333 3566666655
No 186
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.96 E-value=6.6e-05 Score=59.88 Aligned_cols=194 Identities=17% Similarity=0.180 Sum_probs=104.5
Q ss_pred CceEEEecCCCCCh--hhHHHhhh-hc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CC---C
Q 024681 17 DRILVLAHGFGTDQ--SAWQRILP-YL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GV---N 86 (264)
Q Consensus 17 ~p~vv~~hG~~~~~--~~~~~~~~-~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~ 86 (264)
.|++|+--|...-+ ..|..... .| +|...+.-+.||=|+=.+..+....-.+-+...+|..++.+.+ ++ +
T Consensus 421 ~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe 500 (648)
T COG1505 421 NPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPE 500 (648)
T ss_pred CceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHH
Confidence 56776666533222 34444443 44 8999999999998876542111110001223334444444444 33 4
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCCCCCCCCCCCCCccHHHHHHHHHHHHhhhhhhhhhcccccCCCCCh
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPRFLNDEDYHGGFEEAEIDKVFRAMEANYEAWAYGYAPLAVGADVP 166 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
++.+.|-|-||.+.-.+..++|+.+.++|+--|......-..+ ..-..|...+. .++.+
T Consensus 501 ~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l-----------------~aG~sW~~EYG----~Pd~P 559 (648)
T COG1505 501 KLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLL-----------------TAGSSWIAEYG----NPDDP 559 (648)
T ss_pred HhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhccc-----------------ccchhhHhhcC----CCCCH
Confidence 7899999999999988889999988888776663221110000 01112221111 11112
Q ss_pred HHHHHHHHhhcccCchhhhhhhhhhcCCccccccCC-c-ccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecC
Q 024681 167 AAVREFSRTLFNMRPDISLFVSKTVFDTDLRGILGL-V-RVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKI 241 (264)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~ 241 (264)
+... +...+. | ...++. . =-|+||-.+.+|.-|.|..++.++.++... +-+.+=.+
T Consensus 560 ~d~~-~l~~YS---P---------------y~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~ 620 (648)
T COG1505 560 EDRA-FLLAYS---P---------------YHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETK 620 (648)
T ss_pred HHHH-HHHhcC---c---------------hhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecC
Confidence 2111 111111 1 111111 1 237899999999888888888888777542 33333345
Q ss_pred CCCcccccC
Q 024681 242 EGHLPHLSA 250 (264)
Q Consensus 242 ~gH~~~~~~ 250 (264)
+||..--+.
T Consensus 621 gGH~g~~~~ 629 (648)
T COG1505 621 GGHGGAAPT 629 (648)
T ss_pred CcccCCCCh
Confidence 999765443
No 187
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.89 E-value=0.00065 Score=49.95 Aligned_cols=115 Identities=13% Similarity=0.128 Sum_probs=63.7
Q ss_pred eeeEEEEeCC----CCceEEEecCC--CCChhhHHHhhhhc-----CCceEEEecCCCCCCCCCCCCCCcccchHHHHHH
Q 024681 6 EALHVRVVGT----GDRILVLAHGF--GTDQSAWQRILPYL-----NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVD 74 (264)
Q Consensus 6 ~~~~~~~~g~----~~p~vv~~hG~--~~~~~~~~~~~~~l-----~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 74 (264)
..+.|...|- .-|++++.||- ..+...++.+-..+ ..-.++.+|.-.--........... .+..++.
T Consensus 83 ~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~--~~~~L~~ 160 (299)
T COG2382 83 RRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEA--YWRFLAQ 160 (299)
T ss_pred eEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHH--HHHHHHH
Confidence 3444555443 33799999982 22222222222222 4556777765321000000000011 1334444
Q ss_pred HHHHHHHHh-----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 75 DLLNILDTL-----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 75 ~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
++.=.++.. ..+.-+|+|.|+||.+++..+..+|+.+-.++..++...
T Consensus 161 eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 161 ELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 444444332 123578999999999999999999999999998888643
No 188
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.89 E-value=5.4e-05 Score=51.18 Aligned_cols=53 Identities=15% Similarity=0.228 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHh----CCCeEEEEecChhHHHHHHHHHhCCC----ccceeEEecCCC
Q 024681 69 LDAYVDDLLNILDTL----GVNRCAYVGHSVSAMIGLLASIRRPD----LFTKLILIGASP 121 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~ 121 (264)
...+.+.+...++.. ...+++++|||+||.+|..++..... ....++.++++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 444455555555443 45799999999999999998887654 566777777753
No 189
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.87 E-value=5.1e-05 Score=62.47 Aligned_cols=104 Identities=18% Similarity=0.105 Sum_probs=57.2
Q ss_pred CceEEEecCCCC---Ch--hhHHHhhhhc-CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHH---HHh
Q 024681 17 DRILVLAHGFGT---DQ--SAWQRILPYL-NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNIL---DTL 83 (264)
Q Consensus 17 ~p~vv~~hG~~~---~~--~~~~~~~~~l-~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 83 (264)
-|++|+|||.+. +. ..+....-.. +++-|+++++| |+-.+........++. +.|....+.-+- ...
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~G-l~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYG-LLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHH-HHHHHHHHHHHHHHGGGG
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhh-hhhhHHHHHHHHhhhhhc
Confidence 389999999442 22 2222222223 89999999998 3322221110014444 555555554443 444
Q ss_pred CC--CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 84 GV--NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 84 ~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
|- ++|.|+|||.||..+...... ....+.++|+.+++.
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 43 589999999999887665544 235799999999854
No 190
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.86 E-value=5.9e-05 Score=59.06 Aligned_cols=78 Identities=14% Similarity=0.266 Sum_probs=53.2
Q ss_pred hHHHhhhhc--CCce------EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEEEEecChhHHHH
Q 024681 32 AWQRILPYL--NHHR------VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCAYVGHSVSAMIG 100 (264)
Q Consensus 32 ~~~~~~~~l--~g~~------v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a 100 (264)
.|..+++.| .||. ..-+|+|---. ..+++...+...++.. +.++|+|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~------------~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA------------ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh------------hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHH
Confidence 588888888 5553 22378772211 1334444454444433 35799999999999999
Q ss_pred HHHHHhCCC------ccceeEEecCCC
Q 024681 101 LLASIRRPD------LFTKLILIGASP 121 (264)
Q Consensus 101 ~~~a~~~p~------~v~~~vl~~~~~ 121 (264)
..+....+. .|+++|.++++.
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 998887743 599999999863
No 191
>COG0627 Predicted esterase [General function prediction only]
Probab=97.78 E-value=0.00014 Score=54.84 Aligned_cols=106 Identities=15% Similarity=0.192 Sum_probs=64.4
Q ss_pred CCceEEEecCCCCChhhHH---Hhhhhc--CCceEEEecC--------------CCCCCC---CCCC--CCCcccchHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQ---RILPYL--NHHRVIMFDL--------------VCAGSV---NPDY--FDFRRYTTLDA 71 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~---~~~~~l--~g~~v~~~d~--------------~g~G~s---~~~~--~~~~~~~~~~~ 71 (264)
.-|+++++||..++...+. .+-+.. .++.++++|- .|-+.| +... .....|. +++
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q-~~t 131 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQ-WET 131 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccc-hhH
Confidence 3478899999888753332 222222 5666666533 233333 1100 0001133 443
Q ss_pred H-HHHHHHHHHHhCC-----CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 72 Y-VDDLLNILDTLGV-----NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 72 ~-~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+ .+++-..+++... ++..++||||||.=|+.+|.++|++++.+..+++...
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 3 3455544443322 2789999999999999999999999999999888644
No 192
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.72 E-value=0.0082 Score=43.20 Aligned_cols=92 Identities=22% Similarity=0.166 Sum_probs=55.2
Q ss_pred eEEEecCCC--CC-hhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CC----
Q 024681 19 ILVLAHGFG--TD-QSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GV---- 85 (264)
Q Consensus 19 ~vv~~hG~~--~~-~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---- 85 (264)
+|-|+-|.. .. .-.|+.+.+.| +||.|++.-+.- | .+...-..+..+.....++.+ +.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t--------fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~ 89 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T--------FDHQAIAREVWERFERCLRALQKRGGLDPAY 89 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C--------CcHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 566666622 22 34788999999 999999987631 1 111111111112222222222 22
Q ss_pred CeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 86 NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
-|++-+|||+|+-+-+.+...++..-++-|+++-
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 2788999999999988888777655566677764
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.70 E-value=0.00047 Score=47.79 Aligned_cols=100 Identities=22% Similarity=0.245 Sum_probs=61.6
Q ss_pred ceEEEecCCCCC-hhhHHH---------------hhh-hc-CCceEEEecCCC---CCCCCCCCCCCcccc-h-HHHHHH
Q 024681 18 RILVLAHGFGTD-QSAWQR---------------ILP-YL-NHHRVIMFDLVC---AGSVNPDYFDFRRYT-T-LDAYVD 74 (264)
Q Consensus 18 p~vv~~hG~~~~-~~~~~~---------------~~~-~l-~g~~v~~~d~~g---~G~s~~~~~~~~~~~-~-~~~~~~ 74 (264)
..+|+|||.|-- +..|.+ +++ .. .||.|++.+--- +-++... +..|. + .+...-
T Consensus 102 kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~n---p~kyirt~veh~~y 178 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRN---PQKYIRTPVEHAKY 178 (297)
T ss_pred ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccC---cchhccchHHHHHH
Confidence 489999997753 334532 222 23 799999887421 1111111 12221 1 222222
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCC--ccceeEEecCC
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPD--LFTKLILIGAS 120 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~ 120 (264)
-...++.....+.+.++.||+||...+.+..++|+ +|.++.+-+++
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 23344445566899999999999999999999884 67777777775
No 194
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.69 E-value=0.002 Score=44.20 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhC-----CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 69 LDAYVDDLLNILDTLG-----VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.+.-+.+|..+++.+. ..++.++|||+|+.++-..+...+..+..+|+++++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 4556667777776653 2378999999999999888887677899999998764
No 195
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.68 E-value=0.00028 Score=55.24 Aligned_cols=106 Identities=16% Similarity=0.201 Sum_probs=79.6
Q ss_pred CCCceEEEecCCCCChhhH--------HHhhhhcCCceEEEecCCCCCCCCCCCC---CCcccchHHHHHHHHHHHHHHh
Q 024681 15 TGDRILVLAHGFGTDQSAW--------QRILPYLNHHRVIMFDLVCAGSVNPDYF---DFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~--------~~~~~~l~g~~v~~~d~~g~G~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
++.|..++|-|=+.....| ..+++. -|-.|+..++|-+|.|.+... ..-.|.+..+...|+.++|+.+
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akk-fgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKK-FGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHH-hCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 4668888888865554444 222222 477899999999999865221 1234557889999999999988
Q ss_pred CC-------CeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 84 GV-------NRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 84 ~~-------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+. .|.+.+|.|+-|.++..+-.++|+.+.+.|..+++.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 42 289999999999999999999999998888776653
No 196
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.64 E-value=0.00037 Score=54.69 Aligned_cols=106 Identities=17% Similarity=0.118 Sum_probs=60.9
Q ss_pred CCceEEEecCCC---CChhhHHHhhhhc--CC-ceEEEecCCC--CCCCCCCCCC-----CcccchHHHHH---HHHHHH
Q 024681 16 GDRILVLAHGFG---TDQSAWQRILPYL--NH-HRVIMFDLVC--AGSVNPDYFD-----FRRYTTLDAYV---DDLLNI 79 (264)
Q Consensus 16 ~~p~vv~~hG~~---~~~~~~~~~~~~l--~g-~~v~~~d~~g--~G~s~~~~~~-----~~~~~~~~~~~---~~~~~~ 79 (264)
+.|++|+|||.+ ++......--..| +| +-|+++++|- .|.-+-+..+ ..+.. +.|++ +.+.+-
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G-l~DqilALkWV~~N 171 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG-LLDQILALKWVRDN 171 (491)
T ss_pred CCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc-HHHHHHHHHHHHHH
Confidence 459999999943 2222211222344 55 8999999982 1221111000 11111 44444 344455
Q ss_pred HHHhCC--CeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCCC
Q 024681 80 LDTLGV--NRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASPR 122 (264)
Q Consensus 80 ~~~~~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 122 (264)
|++.|- ++|.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 566654 589999999999988776653 2235777888887543
No 197
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.61 E-value=0.00011 Score=56.15 Aligned_cols=119 Identities=14% Similarity=0.129 Sum_probs=90.9
Q ss_pred CCcceeeEEEEeCCCCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 2 GDLLEALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 2 g~~~~~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
|..-+++.....+...|+|+..-|.+.+....+.-...|-+-+-+.+++|-+|.|.+.+.+ ..+.++++.++|...+++
T Consensus 48 gtF~QRvtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld~NQl~vEhRfF~~SrP~p~D-W~~Lti~QAA~D~Hri~~ 126 (448)
T PF05576_consen 48 GTFQQRVTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLDGNQLSVEHRFFGPSRPEPAD-WSYLTIWQAASDQHRIVQ 126 (448)
T ss_pred CceEEEEEEEEcCCCCCeEEEecCcccccCccccchhHhhccceEEEEEeeccCCCCCCCC-cccccHhHhhHHHHHHHH
Confidence 5666778887888888999999998876543332122223446688999999999876543 455579999999999988
Q ss_pred HhC---CCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 82 TLG---VNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 82 ~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
.+. ..+-+--|-|=||+.++.+=.-+|+-|.+.|.-.++.
T Consensus 127 A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 127 AFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred HHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 874 2577888999999999998888999999887765543
No 198
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.61 E-value=0.0079 Score=44.15 Aligned_cols=101 Identities=19% Similarity=0.307 Sum_probs=71.0
Q ss_pred CceEEEecCCCCCh-hhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecC
Q 024681 17 DRILVLAHGFGTDQ-SAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 17 ~p~vv~~hG~~~~~-~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 94 (264)
.|.|+++-.+.++. ...+...+.| ....|+..|+-.-..-.- ....+ +++++++.+.+.++.+|.+ +++++.|
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~---~~G~F-dldDYIdyvie~~~~~Gp~-~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPL---EAGHF-DLDDYIDYVIEMINFLGPD-AHVMAVC 177 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeec---ccCCc-cHHHHHHHHHHHHHHhCCC-CcEEEEe
Confidence 35777777766654 4456677777 888899999864332221 12444 4999999999999999965 7888877
Q ss_pred hhH-----HHHHHHHHhCCCccceeEEecCCCC
Q 024681 95 VSA-----MIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 95 ~Gg-----~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
.=+ .++++.+...|...+++++++++..
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 765 4445555557777889999988643
No 199
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.61 E-value=0.00022 Score=47.34 Aligned_cols=36 Identities=19% Similarity=0.299 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
...+.+..+++.....++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 455566666655565789999999999999887765
No 200
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.57 E-value=0.00069 Score=51.70 Aligned_cols=82 Identities=21% Similarity=0.150 Sum_probs=60.6
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCeEEEE
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNRCAYV 91 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 91 (264)
..-||+.|=|+-...=+.+...| +|+.|+.+|-.=|=.|.. +.++.++|+..+++.. +..++.|+
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r---------tPe~~a~Dl~r~i~~y~~~w~~~~~~li 331 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER---------TPEQIAADLSRLIRFYARRWGAKRVLLI 331 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC---------CHHHHHHHHHHHHHHHHHhhCcceEEEE
Confidence 35566766666444446677888 999999999765555543 4788888888888754 66799999
Q ss_pred ecChhHHHHHHHHHhCC
Q 024681 92 GHSVSAMIGLLASIRRP 108 (264)
Q Consensus 92 G~S~Gg~~a~~~a~~~p 108 (264)
|+|+|+-+.-..-.+.|
T Consensus 332 GySfGADvlP~~~n~L~ 348 (456)
T COG3946 332 GYSFGADVLPFAYNRLP 348 (456)
T ss_pred eecccchhhHHHHHhCC
Confidence 99999987765555554
No 201
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.57 E-value=0.0042 Score=54.25 Aligned_cols=98 Identities=13% Similarity=0.185 Sum_probs=71.0
Q ss_pred CCCceEEEecCCCCChhhHHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEec
Q 024681 15 TGDRILVLAHGFGTDQSAWQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGH 93 (264)
Q Consensus 15 ~~~p~vv~~hG~~~~~~~~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~ 93 (264)
+..|+++|+|..-+....+..++..| ..|-||.-... .-..+++++.++....-++.+.. .|..++|+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl--------e~PaYglQ~T~---~vP~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL--------EIPAYGLQCTE---AVPLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc--------CCcchhhhccc---cCCcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 45689999999999888888888877 12333332211 11223688888888888887765 59999999
Q ss_pred ChhHHHHHHHHHhCC--CccceeEEecCCCCC
Q 024681 94 SVSAMIGLLASIRRP--DLFTKLILIGASPRF 123 (264)
Q Consensus 94 S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~ 123 (264)
|+|+.++..+|.... +....+|++++++.+
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 999999999887542 345669999987654
No 202
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.35 E-value=0.00052 Score=49.67 Aligned_cols=51 Identities=27% Similarity=0.437 Sum_probs=40.1
Q ss_pred HHHHHHHHHHH---hCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 72 YVDDLLNILDT---LGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 72 ~~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+.+++.-++++ .+.++..++|||+||.+++.....+|+.+...++++|+..
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 33444444544 2445799999999999999999999999999999998644
No 203
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.31 E-value=0.00093 Score=47.97 Aligned_cols=47 Identities=17% Similarity=0.153 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC----CccceeEEecCCC
Q 024681 74 DDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP----DLFTKLILIGASP 121 (264)
Q Consensus 74 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~ 121 (264)
+-+..+++..+ +++.+.|||.||.+|..+|...+ ++|.++...+++.
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 33444444444 46999999999999999888743 5788999888853
No 204
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.17 E-value=0.0014 Score=47.57 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=19.5
Q ss_pred CCCeEEEEecChhHHHHHHHHHh
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
...++++.|||+||.+|..++..
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHH
Confidence 34689999999999999887765
No 205
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.10 E-value=0.011 Score=39.21 Aligned_cols=77 Identities=14% Similarity=0.209 Sum_probs=51.5
Q ss_pred ceEEEecCCCCChhhHHHhhhhcCCce-EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 18 RILVLAHGFGTDQSAWQRILPYLNHHR-VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l~g~~-v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
..||++-|++..++....+.-. +++. ++++|++..... + ++. ..+.+.||++|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLilp-eN~dl~lcYDY~dl~ld---------f-Dfs-------------Ay~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLILP-ENHDLLLCYDYQDLNLD---------F-DFS-------------AYRHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhccCC-CCCcEEEEeehhhcCcc---------c-chh-------------hhhhhhhhhhhHH
Confidence 3899999999998766554311 4544 567887643111 1 011 1246789999999
Q ss_pred HHHHHHHHHhCCCccceeEEecCC
Q 024681 97 AMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 97 g~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
-++|-++....+ .++.+.+++.
T Consensus 68 VwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCC
Confidence 999999887764 6777777764
No 206
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.07 E-value=0.0014 Score=51.25 Aligned_cols=84 Identities=13% Similarity=0.146 Sum_probs=53.2
Q ss_pred hhHHHhhhhc--CCce------EEEecCCC-CCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHH
Q 024681 31 SAWQRILPYL--NHHR------VIMFDLVC-AGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGL 101 (264)
Q Consensus 31 ~~~~~~~~~l--~g~~------v~~~d~~g-~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 101 (264)
..|..+++.| -||. -..+|+|- +-.+.. .+. .+..+..-++...+.-+.+|++|++||||+.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~----rd~--yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEE----RDQ--YLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhH----HHH--HHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 4677888877 4554 35677763 111111 111 2444444444444444668999999999999999
Q ss_pred HHHHhCCC--------ccceeEEecCC
Q 024681 102 LASIRRPD--------LFTKLILIGAS 120 (264)
Q Consensus 102 ~~a~~~p~--------~v~~~vl~~~~ 120 (264)
.+...+++ .|++.+-++++
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCch
Confidence 99988776 36666666653
No 207
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.04 E-value=0.0021 Score=48.52 Aligned_cols=48 Identities=17% Similarity=0.121 Sum_probs=42.5
Q ss_pred CCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 201 GLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 201 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
.++..|-.++.+..|.+.+++.+...++.+|+.+-+.++|+..|...-
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n 373 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN 373 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH
Confidence 456889999999999999999999999999997788999999997653
No 208
>PLN02162 triacylglycerol lipase
Probab=97.02 E-value=0.0031 Score=49.59 Aligned_cols=37 Identities=16% Similarity=0.099 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 69 LDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
..++.+.+...+......++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3345555666666555568999999999999988754
No 209
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.99 E-value=0.0019 Score=52.30 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=48.9
Q ss_pred hHHHhhhhc--CCce-----EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh----CCCeEEEEecChhHHHH
Q 024681 32 AWQRILPYL--NHHR-----VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL----GVNRCAYVGHSVSAMIG 100 (264)
Q Consensus 32 ~~~~~~~~l--~g~~-----v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a 100 (264)
.|..+++.| .||. ...+|+|-.. .. .. .-+++...+...++.+ +.++|+|+||||||.++
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~---~~---le---~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ 227 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSF---QN---TE---VRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYF 227 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCc---cc---hh---hhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHH
Confidence 567888888 6774 3344554111 00 00 1233434444444432 35799999999999999
Q ss_pred HHHHHhCC---------------CccceeEEecCC
Q 024681 101 LLASIRRP---------------DLFTKLILIGAS 120 (264)
Q Consensus 101 ~~~a~~~p---------------~~v~~~vl~~~~ 120 (264)
+.+..... ..|++.|.++++
T Consensus 228 lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 228 LHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 98765321 247888998875
No 210
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.97 E-value=0.0049 Score=51.10 Aligned_cols=103 Identities=21% Similarity=0.184 Sum_probs=60.2
Q ss_pred CceEEEecCCCC---ChhhHHHhh--hhc--CCceEEEecCC----CCCCCCCCCCCCcccchHHHHHHHHHHHHHH---
Q 024681 17 DRILVLAHGFGT---DQSAWQRIL--PYL--NHHRVIMFDLV----CAGSVNPDYFDFRRYTTLDAYVDDLLNILDT--- 82 (264)
Q Consensus 17 ~p~vv~~hG~~~---~~~~~~~~~--~~l--~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--- 82 (264)
-|++|++||.+. +...+.... ..+ ++.-|+++.+| |+...... ..+.++. +.|+...+.-+-+.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~-~~~gN~g-l~Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDS-AAPGNLG-LFDQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCC-CCCCccc-HHHHHHHHHHHHHHHHh
Confidence 589999999653 222232221 122 57888888887 33222211 1135554 55555555444443
Q ss_pred hC--CCeEEEEecChhHHHHHHHHHh--CCCccceeEEecCCC
Q 024681 83 LG--VNRCAYVGHSVSAMIGLLASIR--RPDLFTKLILIGASP 121 (264)
Q Consensus 83 ~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 121 (264)
.| .++|.|+|||.||..+..+... ....+.++|..++..
T Consensus 190 FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 190 FGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred cCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 33 4689999999999988665542 124566677776643
No 211
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.97 E-value=0.00096 Score=51.07 Aligned_cols=86 Identities=16% Similarity=0.272 Sum_probs=51.2
Q ss_pred ceEEEecCCCC-ChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecCh
Q 024681 18 RILVLAHGFGT-DQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSV 95 (264)
Q Consensus 18 p~vv~~hG~~~-~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 95 (264)
-.+|++||+-+ +...|...+... ..+.=..+..+|+-.......+...+- -+..++++.+.+....++++..+|||+
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~l-G~Rla~~~~e~~~~~si~kISfvghSL 159 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVL-GERLAEEVKETLYDYSIEKISFVGHSL 159 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceee-ecccHHHHhhhhhccccceeeeeeeec
Confidence 48999999777 667777666555 222211333344333222222222222 344566666666666688999999999
Q ss_pred hHHHHHHHH
Q 024681 96 SAMIGLLAS 104 (264)
Q Consensus 96 Gg~~a~~~a 104 (264)
||.++..+.
T Consensus 160 GGLvar~AI 168 (405)
T KOG4372|consen 160 GGLVARYAI 168 (405)
T ss_pred CCeeeeEEE
Confidence 999876543
No 212
>PLN00413 triacylglycerol lipase
Probab=96.94 E-value=0.0043 Score=48.99 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.++.+.+..+++.....++++.|||+||.+|..+|.
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 345667777777766678999999999999988774
No 213
>PLN02571 triacylglycerol lipase
Probab=96.74 E-value=0.0034 Score=48.89 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhCCC--eEEEEecChhHHHHHHHHHh
Q 024681 70 DAYVDDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+++.+++..+++....+ ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45666666776665433 68999999999999988764
No 214
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.74 E-value=0.0045 Score=42.93 Aligned_cols=74 Identities=19% Similarity=0.170 Sum_probs=42.3
Q ss_pred CCceEEEecCCCCCCCCCCCCCCccc-chHHHHHHHHHHHH----HHhCCCeEEEEecChhHHHHHHHHHh--C----CC
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRY-TTLDAYVDDLLNIL----DTLGVNRCAYVGHSVSAMIGLLASIR--R----PD 109 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~--~----p~ 109 (264)
....+..+++|-..... .| .+...=+.++...+ ..-...+++|+|+|.|+.++..++.. . .+
T Consensus 38 ~~~~~~~V~YpA~~~~~-------~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~ 110 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPN-------SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVAD 110 (179)
T ss_dssp CEEEEEE--S---SCGG-------SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHH
T ss_pred CeeEEEecCCCCCCCcc-------cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhh
Confidence 34566667776332110 11 12333334444444 33344699999999999999988877 2 25
Q ss_pred ccceeEEecCCC
Q 024681 110 LFTKLILIGASP 121 (264)
Q Consensus 110 ~v~~~vl~~~~~ 121 (264)
+|.++++++-+.
T Consensus 111 ~I~avvlfGdP~ 122 (179)
T PF01083_consen 111 RIAAVVLFGDPR 122 (179)
T ss_dssp HEEEEEEES-TT
T ss_pred hEEEEEEecCCc
Confidence 788999998653
No 215
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.73 E-value=0.0048 Score=43.39 Aligned_cols=68 Identities=13% Similarity=-0.066 Sum_probs=41.1
Q ss_pred hc-CCceEEEecCCCCCCCC------CCCCCCcccchHHHHHHHHHHHHHHhCC-CeEEEEecChhHHHHHHHHHhC
Q 024681 39 YL-NHHRVIMFDLVCAGSVN------PDYFDFRRYTTLDAYVDDLLNILDTLGV-NRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 39 ~l-~g~~v~~~d~~g~G~s~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
.+ .-.+|+++=+|=..... ......... -..|..+....++++.+. ++++|+|||.|+.+..++..++
T Consensus 41 ~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~-ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDL-AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcCCccccChhhcchhhhhhccCcchhHHHHHh-hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 44 66788888777332111 100000111 134455555566666654 5999999999999999998764
No 216
>PLN02454 triacylglycerol lipase
Probab=96.72 E-value=0.004 Score=48.47 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=22.8
Q ss_pred HHHHHHHHHhCCC--eEEEEecChhHHHHHHHHHh
Q 024681 74 DDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 74 ~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 106 (264)
..+..+++..... ++++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344444433333 49999999999999988854
No 217
>PLN02408 phospholipase A1
Probab=96.51 E-value=0.006 Score=46.84 Aligned_cols=35 Identities=20% Similarity=0.397 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCCC--eEEEEecChhHHHHHHHHHh
Q 024681 72 YVDDLLNILDTLGVN--RCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 106 (264)
..+.+..+++....+ ++++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 445555566555433 59999999999999887764
No 218
>PLN02310 triacylglycerol lipase
Probab=96.43 E-value=0.014 Score=45.43 Aligned_cols=37 Identities=14% Similarity=0.294 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhC----CCeEEEEecChhHHHHHHHHHh
Q 024681 70 DAYVDDLLNILDTLG----VNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+++.+.+..+++... ..++.+.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 445556666665542 1379999999999999887753
No 219
>PLN02934 triacylglycerol lipase
Probab=96.32 E-value=0.0095 Score=47.53 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.+....+..+++.....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345666677777666679999999999999988874
No 220
>PLN02324 triacylglycerol lipase
Probab=96.19 E-value=0.012 Score=45.96 Aligned_cols=36 Identities=19% Similarity=0.367 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCC--CeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLGV--NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
++.+.+..+++.... .+|.+.|||+||.+|+..|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 344455566665443 269999999999999888753
No 221
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.16 E-value=0.019 Score=43.93 Aligned_cols=38 Identities=26% Similarity=0.445 Sum_probs=29.8
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCC-----ccceeEEecCCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPD-----LFTKLILIGASP 121 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~ 121 (264)
+.+|+.|+|||+|+.+...+.....+ .|+.+++++++.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 55789999999999998876654433 488999998753
No 222
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.05 E-value=0.14 Score=39.45 Aligned_cols=60 Identities=15% Similarity=0.076 Sum_probs=45.2
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcCCC---ceEEEecCCCCcccc-cChhcHHHHHHHHhc
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGGR---NTVELLKIEGHLPHL-SAPAIVGPVIRRALS 263 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 263 (264)
..+.+.+.+..|.++|....+++.+..... ++.+-+.++-|..+. ..|....+...+|++
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~ 288 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLR 288 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHH
Confidence 457788999999999999988886554332 455566678886655 468888888888875
No 223
>PLN02847 triacylglycerol lipase
Probab=96.05 E-value=0.15 Score=41.95 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=18.1
Q ss_pred CeEEEEecChhHHHHHHHHHh
Q 024681 86 NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999877664
No 224
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.95 E-value=0.019 Score=38.70 Aligned_cols=111 Identities=13% Similarity=0.118 Sum_probs=62.2
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHH------Hhhhhc-C-CceEEEecCCCCCCCCC-CCCCCcccchHHHHHHHHH
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQ------RILPYL-N-HHRVIMFDLVCAGSVNP-DYFDFRRYTTLDAYVDDLL 77 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~------~~~~~l-~-g~~v~~~d~~g~G~s~~-~~~~~~~~~~~~~~~~~~~ 77 (264)
.+.+...|.+..+||+++--++.-..|. .++..+ . ....++++- -...+- .... ......+....--.
T Consensus 16 dMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~g--ldsESf~a~h~-~~adr~~rH~Ayer 92 (227)
T COG4947 16 DMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSG--LDSESFLATHK-NAADRAERHRAYER 92 (227)
T ss_pred hhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEecc--cchHhHhhhcC-CHHHHHHHHHHHHH
Confidence 3455667775445666665555544443 234444 3 334455442 211110 0000 00011222223333
Q ss_pred HHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 78 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
-++++.-.....+-|.||||..|..+.-++|+...++|.+++.
T Consensus 93 Yv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 93 YVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred HHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 3444444456778899999999999999999999999999875
No 225
>PLN02802 triacylglycerol lipase
Probab=95.95 E-value=0.017 Score=46.10 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhCC--CeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLGV--NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
++.+++..+++.... .++++.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344455555554432 268999999999999887764
No 226
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.93 E-value=0.017 Score=39.86 Aligned_cols=61 Identities=15% Similarity=0.142 Sum_probs=45.5
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHH---HcCCC-ceEEEecCCCCcccccCh---hcHHHHHHHHhcC
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQR---HLGGR-NTVELLKIEGHLPHLSAP---AIVGPVIRRALSR 264 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~---~~~~~-~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 264 (264)
++++|-|-|+.|.++.........+ .+|.. ...++.+++||+-...-+ +++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 4677889999999998766555444 44443 567788999998666544 7889999999863
No 227
>PLN02753 triacylglycerol lipase
Probab=95.90 E-value=0.018 Score=46.26 Aligned_cols=36 Identities=14% Similarity=0.362 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHhCC-----CeEEEEecChhHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTLGV-----NRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~ 105 (264)
+++.+.+..+++.... .++.+.|||+||.+|+.+|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3444555566655432 48999999999999998875
No 228
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.80 E-value=0.02 Score=45.90 Aligned_cols=36 Identities=14% Similarity=0.315 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhC----CCeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLG----VNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+..+++..+++... ..++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 45566666666553 1369999999999999887753
No 229
>PLN02719 triacylglycerol lipase
Probab=95.68 E-value=0.026 Score=45.16 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhCC-----CeEEEEecChhHHHHHHHHHh
Q 024681 71 AYVDDLLNILDTLGV-----NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
++.+.+..+++.... .++.+.|||+||.+|..+|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344445555554421 379999999999999887753
No 230
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.65 E-value=0.015 Score=32.31 Aligned_cols=19 Identities=21% Similarity=0.476 Sum_probs=11.1
Q ss_pred CCceEEEecCCCCChhhHH
Q 024681 16 GDRILVLAHGFGTDQSAWQ 34 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~ 34 (264)
.+|+|++.||+.+++..|-
T Consensus 42 ~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp T--EEEEE--TT--GGGGC
T ss_pred CCCcEEEECCcccChHHHH
Confidence 4689999999999998873
No 231
>PLN02761 lipase class 3 family protein
Probab=95.62 E-value=0.026 Score=45.31 Aligned_cols=35 Identities=17% Similarity=0.353 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhC-----C-CeEEEEecChhHHHHHHHHH
Q 024681 71 AYVDDLLNILDTLG-----V-NRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 71 ~~~~~~~~~~~~~~-----~-~~~~l~G~S~Gg~~a~~~a~ 105 (264)
++.+.+..+++... . .++.+.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 44455555555442 1 36999999999999988774
No 232
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.19 E-value=0.05 Score=41.97 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4666777777777776689999999999999887764
No 233
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.29 E-value=2.4 Score=34.31 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=65.4
Q ss_pred eeEEEEeCC-CCceEEEecCCCCChhhHH--HhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh
Q 024681 7 ALHVRVVGT-GDRILVLAHGFGTDQSAWQ--RILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL 83 (264)
Q Consensus 7 ~~~~~~~g~-~~p~vv~~hG~~~~~~~~~--~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (264)
.++|-..|+ .+|..|++-|+-. ++-|. .+++.|.-=-.+.-|.|--|.+=-. ....| -+.+.+-+...++.|
T Consensus 278 i~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~PfLL~~DpRleGGaFYl--Gs~ey--E~~I~~~I~~~L~~L 352 (511)
T TIGR03712 278 FIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGAPFLLIGDPRLEGGAFYL--GSDEY--EQGIINVIQEKLDYL 352 (511)
T ss_pred eEEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcCCCeEEeeccccccceeee--CcHHH--HHHHHHHHHHHHHHh
Confidence 455656677 5567799998765 44443 3445552223345577766655211 01112 234555566777888
Q ss_pred CCC--eEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 84 GVN--RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 84 ~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
+-+ .++|-|-|||..=|+.++++.. ..++|+--|
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKP 388 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKP 388 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccCC--CceEEEcCc
Confidence 764 7999999999999999998753 355555554
No 234
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.28 E-value=0.34 Score=35.04 Aligned_cols=63 Identities=13% Similarity=0.005 Sum_probs=37.0
Q ss_pred CceEEEecCCCC-CC-CCCCCCCCcccchHHHHHHHHHHHHHHh--CCCeEEEEecChhHHHHHHHHHh
Q 024681 42 HHRVIMFDLVCA-GS-VNPDYFDFRRYTTLDAYVDDLLNILDTL--GVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 42 g~~v~~~d~~g~-G~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
|+.+..+++|.. +- +..... ..+ .+..+=++.+.+.++.. ..++++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~-t~~-~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSP-TYD-ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCC-ccc-hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 566777777751 11 000000 001 13555556666666552 23689999999999999876654
No 235
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.00 E-value=0.5 Score=35.68 Aligned_cols=102 Identities=17% Similarity=0.151 Sum_probs=67.9
Q ss_pred CCceEEEecCCCCChh----hHHHhhh-----------hcCCceEEEecCC-CCCCCCCCCCCCccc-chHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQS----AWQRILP-----------YLNHHRVIMFDLV-CAGSVNPDYFDFRRY-TTLDAYVDDLLN 78 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~----~~~~~~~-----------~l~g~~v~~~d~~-g~G~s~~~~~~~~~~-~~~~~~~~~~~~ 78 (264)
.+|..+.+.|.++.+. .|+.+-+ .|+.-.++.+|-| |.|.|-... ...| .+..+.+.|+.+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg--~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDG--SSAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecC--cccccccHHHHHHHHHH
Confidence 4578889988766543 3444333 1145578888887 788873321 1233 257889999999
Q ss_pred HHHHh-------CCCeEEEEecChhHHHHHHHHHhCCC---------ccceeEEecC
Q 024681 79 ILDTL-------GVNRCAYVGHSVSAMIGLLASIRRPD---------LFTKLILIGA 119 (264)
Q Consensus 79 ~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p~---------~v~~~vl~~~ 119 (264)
+++.+ +..|++|+.-|+||-+|..++...-+ .+.+++|-++
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 99865 33589999999999999887754322 3456666665
No 236
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.50 E-value=0.18 Score=40.99 Aligned_cols=85 Identities=15% Similarity=0.154 Sum_probs=56.5
Q ss_pred hhhhc-CCceEEEecCCCCCCCCC---CCCCCc-------ccchHHHHHHHHHHHHHHh---CCCeEEEEecChhHHHHH
Q 024681 36 ILPYL-NHHRVIMFDLVCAGSVNP---DYFDFR-------RYTTLDAYVDDLLNILDTL---GVNRCAYVGHSVSAMIGL 101 (264)
Q Consensus 36 ~~~~l-~g~~v~~~d~~g~G~s~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~ 101 (264)
+...+ +||.++.-|- ||..+.. ...... .|..+...+.--+++++.. ..+.-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 45567 9999999995 6655532 111100 0112222223333444433 345788999999999999
Q ss_pred HHHHhCCCccceeEEecCCC
Q 024681 102 LASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 102 ~~a~~~p~~v~~~vl~~~~~ 121 (264)
..|+++|+..++++.-+|+.
T Consensus 131 ~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHhChhhcCeEEeCCchH
Confidence 99999999999999999854
No 237
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.78 E-value=0.31 Score=39.95 Aligned_cols=53 Identities=23% Similarity=0.423 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhC---CCeEEEEecChhHHHHHHHHHh-----CCC------ccceeEEecCCC
Q 024681 69 LDAYVDDLLNILDTLG---VNRCAYVGHSVSAMIGLLASIR-----RPD------LFTKLILIGASP 121 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~v~~~vl~~~~~ 121 (264)
+..-...+.+.+...+ .++++.+||||||.++=.+... .|+ .-.+++.++.+.
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 4444444555454443 3589999999999888554332 232 346677777653
No 238
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.96 E-value=0.56 Score=34.77 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=24.9
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
...++.+-|||+||.+|..+..++. +..+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3358999999999999999888774 334444444
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.96 E-value=0.56 Score=34.77 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=24.9
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
...++.+-|||+||.+|..+..++. +..+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3358999999999999999888774 334444444
No 240
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.81 E-value=0.4 Score=39.09 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=46.0
Q ss_pred cccCEEEEecCCCCCcchhhHHHHHHHc----CC-------CceEEEecCCCCccccc--ChhcHHHHHHHHhcC
Q 024681 203 VRVPCVIIQTSKDVSVPVSVAEYLQRHL----GG-------RNTVELLKIEGHLPHLS--APAIVGPVIRRALSR 264 (264)
Q Consensus 203 i~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~ 264 (264)
-.-.+++.||..|.++|+..+..+++++ .. -.++..+||.+|+.--. .+-.....|.+|+++
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 3578999999999999987766555443 21 16899999999975544 345678888888764
No 241
>PRK12467 peptide synthase; Provisional
Probab=89.36 E-value=3.9 Score=43.07 Aligned_cols=97 Identities=12% Similarity=-0.025 Sum_probs=69.7
Q ss_pred CceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEecC
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVGHS 94 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S 94 (264)
.+.+++.|........+..+...+ .+..++.+..++.-.... ...+++.++....+.+.+.. ..+..+.|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~------~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s 3765 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGW------QDTSLQAMAVQYADYILWQQAKGPYGLLGWS 3765 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccC------CccchHHHHHHHHHHHHHhccCCCeeeeeee
Confidence 356999999888888888888888 888899888766532221 11147777777777776654 3589999999
Q ss_pred hhHHHHHHHHHh---CCCccceeEEecC
Q 024681 95 VSAMIGLLASIR---RPDLFTKLILIGA 119 (264)
Q Consensus 95 ~Gg~~a~~~a~~---~p~~v~~~vl~~~ 119 (264)
+||.++..++.. ..+.+.-+.+++.
T Consensus 3766 ~g~~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3766 LGGTLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred cchHHHHHHHHHHHHcCCceeEEEEEec
Confidence 999999887664 4455666666654
No 242
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=89.15 E-value=1.4 Score=36.35 Aligned_cols=95 Identities=19% Similarity=0.190 Sum_probs=52.1
Q ss_pred eEEEecCCCCCh---hh----HHHhhhhcCCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH---HhCC--C
Q 024681 19 ILVLAHGFGTDQ---SA----WQRILPYLNHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD---TLGV--N 86 (264)
Q Consensus 19 ~vv~~hG~~~~~---~~----~~~~~~~l~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~ 86 (264)
.|+-+||.|.-+ .. .+.++..| +..|+.+|+---.+..-+ . -.++..-...-+++ .+|. +
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL-~cPiiSVdYSLAPEaPFP----R---aleEv~fAYcW~inn~allG~TgE 469 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQAL-GCPIISVDYSLAPEAPFP----R---ALEEVFFAYCWAINNCALLGSTGE 469 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHh-CCCeEEeeeccCCCCCCC----c---HHHHHHHHHHHHhcCHHHhCcccc
Confidence 778889977422 22 23344444 788999997433222111 1 13333322222332 2332 6
Q ss_pred eEEEEecChhHHHHHHHHHh----CCCccceeEEecCCC
Q 024681 87 RCAYVGHSVSAMIGLLASIR----RPDLFTKLILIGASP 121 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~ 121 (264)
+|+++|-|.||.+.+..|.+ .-...+++++.-++.
T Consensus 470 riv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 470 RIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred eEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 99999999999765544433 222346788777643
No 243
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=88.55 E-value=4.2 Score=25.19 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=53.1
Q ss_pred hHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhH--HHHHHHHHhC
Q 024681 32 AWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSA--MIGLLASIRR 107 (264)
Q Consensus 32 ~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg--~~a~~~a~~~ 107 (264)
.|..+.+.+ .+|..=.+.++..|.+-....... ..+.=...+..+++.....+++|+|-|--. -+-..+|.++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~---~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSG---AEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCC---chhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 344455555 567766677777766532211111 112445567778888887899999988766 3445678899
Q ss_pred CCccceeEE
Q 024681 108 PDLFTKLIL 116 (264)
Q Consensus 108 p~~v~~~vl 116 (264)
|++|.++.+
T Consensus 89 P~~i~ai~I 97 (100)
T PF09949_consen 89 PGRILAIYI 97 (100)
T ss_pred CCCEEEEEE
Confidence 999998865
No 244
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.92 E-value=2.2 Score=34.67 Aligned_cols=40 Identities=23% Similarity=0.317 Sum_probs=30.7
Q ss_pred hCCCeEEEEecChhHHHHHHHHHh-----CCCccceeEEecCCCC
Q 024681 83 LGVNRCAYVGHSVSAMIGLLASIR-----RPDLFTKLILIGASPR 122 (264)
Q Consensus 83 ~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~v~~~vl~~~~~~ 122 (264)
.|.+||.|+|+|+|+.+...+... .-..|..+++++++..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 367899999999999998765542 2246888999998644
No 245
>PF03283 PAE: Pectinacetylesterase
Probab=87.81 E-value=4 Score=32.13 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=24.6
Q ss_pred CCeEEEEecChhHHHHHHH----HHhCCCccceeEEecCC
Q 024681 85 VNRCAYVGHSVSAMIGLLA----SIRRPDLFTKLILIGAS 120 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~----a~~~p~~v~~~vl~~~~ 120 (264)
.++++|.|.|.||.-++.. +...|..++-..+.+++
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 4689999999999888764 34566545445555543
No 246
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=83.75 E-value=0.97 Score=34.79 Aligned_cols=30 Identities=30% Similarity=0.473 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
+.++++..|+++-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 345567778899999999999988887654
No 247
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=83.34 E-value=1.8 Score=32.96 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=24.1
Q ss_pred HHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
.++++..|+++-.++|||+|-..|+.++..
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 345567788999999999999988876643
No 248
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=82.78 E-value=2 Score=32.68 Aligned_cols=30 Identities=20% Similarity=0.039 Sum_probs=23.9
Q ss_pred HHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
.++++..++++..++|||+|=..|+.++..
T Consensus 67 ~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 67 WRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 455566788999999999999888877643
No 249
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=80.51 E-value=3.2 Score=28.64 Aligned_cols=33 Identities=21% Similarity=0.186 Sum_probs=25.6
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+...+++.++..-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344455557778889999999999999988654
No 250
>PRK10279 hypothetical protein; Provisional
Probab=80.49 E-value=2.7 Score=32.08 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+...+++.++..-.+.|.|+|+.++..+|....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 445556678888899999999999999997654
No 251
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=80.47 E-value=2.9 Score=32.01 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=26.5
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHhC
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
-+...+++.++..-.++|.|+|+.++..+|...
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 345556666888888999999999999998764
No 252
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=79.95 E-value=2.6 Score=31.89 Aligned_cols=29 Identities=24% Similarity=0.210 Sum_probs=22.9
Q ss_pred HHHHHhC-CCeEEEEecChhHHHHHHHHHh
Q 024681 78 NILDTLG-VNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 78 ~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
..++..+ +++..++|||+|=+.|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 4445566 8899999999999988877654
No 253
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=79.01 E-value=3.6 Score=31.55 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=27.4
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+.+.+++.++..-.+.|-|+|+.++..+|....
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 456667778889999999999999999988543
No 254
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=78.72 E-value=3.8 Score=28.83 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
+...+++.++..-.++|-|.||.+|..++...
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 33444555777788999999999999998754
No 255
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=78.45 E-value=2.5 Score=28.70 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=28.5
Q ss_pred ecCCCCCCCCCCCCCCcccchHHHHHHHH----HHHHHHh----CCCeEEEEecChhHH
Q 024681 48 FDLVCAGSVNPDYFDFRRYTTLDAYVDDL----LNILDTL----GVNRCAYVGHSVSAM 98 (264)
Q Consensus 48 ~d~~g~G~s~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~l~G~S~Gg~ 98 (264)
+-+-|||...........++ ..+++.-+ ..+.+.. ..+++.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~-a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYS-ADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEE-HHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCC-HHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 33458887733322344554 88888887 4444444 246899999999987
No 256
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=78.22 E-value=33 Score=27.48 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=62.8
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCC--------------------cccchHHHHHHH
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDF--------------------RRYTTLDAYVDD 75 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~--------------------~~~~~~~~~~~~ 75 (264)
|+|+++--+-.-...+..+.+.+ .|..++.+|.--.|.+.... +. +.-..++.+++-
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~-di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPP-DISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCC-CcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 34555544445556777788888 89999999974444332210 00 000123444444
Q ss_pred HHHHHHHh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEec
Q 024681 76 LLNILDTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIG 118 (264)
Q Consensus 76 ~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~ 118 (264)
...++..+ .++-++-+|-|.|..++.......|=-+-++++.-
T Consensus 81 a~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST 127 (403)
T PF06792_consen 81 AARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVST 127 (403)
T ss_pred HHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEc
Confidence 55555554 34678899999999999999998886666665543
No 257
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=77.53 E-value=5 Score=29.08 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=23.7
Q ss_pred HHHHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 78 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
..+++.+++.-.+.|-|.|+.++..+|...+
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 3344456777789999999999999987543
No 258
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=77.44 E-value=0.25 Score=37.19 Aligned_cols=91 Identities=16% Similarity=0.063 Sum_probs=47.3
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc--CCceEEEecC----------CCCCCCCCCCCCCc--ccc--hHHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDL----------VCAGSVNPDYFDFR--RYT--TLDAYVDDLLNI 79 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~----------~g~G~s~~~~~~~~--~~~--~~~~~~~~~~~~ 79 (264)
.-|.+++.||++............+ .++.+...+. +|++.+.....+.. .+. .......+....
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLL 127 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHH
Confidence 4478999999998887765555555 6677666654 23222211000000 000 000111111111
Q ss_pred HHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 80 LDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 80 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
.. ...+....|+++|+..+..++...+
T Consensus 128 ~~--~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 128 GA--SLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred hh--hcCcceEEEEEeeccchHHHhhcch
Confidence 11 1257788888888888877777665
No 259
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=75.53 E-value=4.8 Score=30.18 Aligned_cols=32 Identities=25% Similarity=0.355 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
+...+++.++..-.+.|.|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44555667887778999999999999998764
No 260
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=74.33 E-value=38 Score=26.22 Aligned_cols=91 Identities=10% Similarity=-0.030 Sum_probs=49.2
Q ss_pred CCCceEEEecCCC----CCh-hhHHHhhhhc---CCceEEEecCCCCCCCCCCC-C---------CCc---ccchHH-HH
Q 024681 15 TGDRILVLAHGFG----TDQ-SAWQRILPYL---NHHRVIMFDLVCAGSVNPDY-F---------DFR---RYTTLD-AY 72 (264)
Q Consensus 15 ~~~p~vv~~hG~~----~~~-~~~~~~~~~l---~g~~v~~~d~~g~G~s~~~~-~---------~~~---~~~~~~-~~ 72 (264)
+.+..|+|+-|.. ... ..--.+...| .+.+++++=-+|.|.-.-.. . ... .+. +. .+
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~g-L~~nI 107 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQG-LVQNI 107 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHH-HHHHH
Confidence 3455888888833 222 2333455556 46777777678877542100 0 000 000 11 11
Q ss_pred HHHHHHHHHHhC-CCeEEEEecChhHHHHHHHHHh
Q 024681 73 VDDLLNILDTLG-VNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 73 ~~~~~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
.+...-++.+.. .++|+++|+|-|+..|--+|..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 122223333333 2689999999999999777754
No 261
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=73.81 E-value=6.6 Score=27.18 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=23.9
Q ss_pred HHHHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 78 NILDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 78 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
..+++.+...-.+.|-|.|+.+|..++...+
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3444556677789999999999999887654
No 262
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=73.25 E-value=28 Score=27.54 Aligned_cols=84 Identities=20% Similarity=0.277 Sum_probs=56.9
Q ss_pred ceEEEecCCCC-------ChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEE
Q 024681 18 RILVLAHGFGT-------DQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCA 89 (264)
Q Consensus 18 p~vv~~hG~~~-------~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (264)
..||++||-+. +.+.|..++..+ +.=.+-.+|.-..|..+ .+++-+.-+..++... +-.
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~----------GleeDa~~lR~~a~~~---~~~ 238 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD----------GLEEDAYALRLFAEVG---PEL 238 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc----------chHHHHHHHHHHHHhC---CcE
Confidence 37999998443 456899999888 44455566766555443 2555566666665543 238
Q ss_pred EEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 90 YVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 90 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
++..|+.=.+++ |.+||-++.+++.
T Consensus 239 lva~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 239 LVASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred EEEehhhhhhhh-----hhhccceeEEEeC
Confidence 888887766655 7789999998876
No 263
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=73.22 E-value=2.1 Score=33.83 Aligned_cols=59 Identities=12% Similarity=-0.072 Sum_probs=36.1
Q ss_pred CCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCccccc-----ChhcHHHHHHHHh
Q 024681 201 GLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLS-----APAIVGPVIRRAL 262 (264)
Q Consensus 201 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----~~~~~~~~i~~fl 262 (264)
.+-.-.+|+|+|++|+..-.. -.+.+.-.+ ..+.+.||++|..... ..++....|.+|-
T Consensus 348 r~~~~rmlFVYG~nDPW~A~~--f~l~~g~~d-s~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 348 RNNGPRMLFVYGENDPWSAEP--FRLGKGKRD-SYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred HhCCCeEEEEeCCCCCcccCc--cccCCCCcc-eEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 334567899999999976321 111111223 6788889999964443 2355566666664
No 264
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=73.18 E-value=16 Score=26.07 Aligned_cols=48 Identities=17% Similarity=0.115 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEecCh----hHHHHHHHHHhCC-CccceeEEe
Q 024681 69 LDAYVDDLLNILDTLGVNRCAYVGHSV----SAMIGLLASIRRP-DLFTKLILI 117 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~G~S~----Gg~~a~~~a~~~p-~~v~~~vl~ 117 (264)
.+.+++.+.++++..+ -.++|+|+|. |..++-++|.+.. ..+..++-+
T Consensus 93 ~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 93 TLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred hHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 7888999999988877 5799999998 8888888887753 234444444
No 265
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=72.54 E-value=6.5 Score=28.36 Aligned_cols=33 Identities=27% Similarity=0.383 Sum_probs=25.6
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+...+.+.+...-.+.|.|.|+.+|..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 334455557667789999999999999998764
No 266
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=70.82 E-value=2.7 Score=33.77 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=26.9
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCcc
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLF 111 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 111 (264)
+...+.+.++.+-++.|-|.|+.+|..++...++.+
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 334444456677789999999999999998766554
No 267
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=70.50 E-value=6.1 Score=32.94 Aligned_cols=31 Identities=13% Similarity=-0.011 Sum_probs=25.3
Q ss_pred HHHH-HHhCCCeEEEEecChhHHHHHHHHHhC
Q 024681 77 LNIL-DTLGVNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 77 ~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
.+++ +..|++|-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 577899999999999999998887655
No 268
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=69.27 E-value=18 Score=21.09 Aligned_cols=25 Identities=12% Similarity=0.068 Sum_probs=18.8
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+.+++.++|-|.|=.+|.+.+..+.
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CCceEEEEecCCcccHHHHHHHHhc
Confidence 4578999999999999987776653
No 269
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=69.16 E-value=11 Score=25.98 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=23.2
Q ss_pred HHHHHHhCCCeEEEEecChhHHHHHHHHHhC
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
...+++.+...-.+.|-|.|+.+|..++...
T Consensus 19 l~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3344445666678999999999999988654
No 270
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=67.81 E-value=4.4 Score=33.85 Aligned_cols=34 Identities=12% Similarity=0.041 Sum_probs=27.0
Q ss_pred EEEEecChhHHHHHHHHHhCC-CccceeEEecCCC
Q 024681 88 CAYVGHSVSAMIGLLASIRRP-DLFTKLILIGASP 121 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~ 121 (264)
|+--+.|-||..+++.|.+.. ..|++++...|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 556689999999999998754 4688888888753
No 271
>PRK02399 hypothetical protein; Provisional
Probab=66.85 E-value=66 Score=25.91 Aligned_cols=99 Identities=15% Similarity=0.105 Sum_probs=59.4
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCC-CCCC-------------------CcccchHHHHHHH
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNP-DYFD-------------------FRRYTTLDAYVDD 75 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~-~~~~-------------------~~~~~~~~~~~~~ 75 (264)
+.|+++--+-.-...+..+...+ .|..|+.+|.-..|.... .... .... -++.+++-
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~-ai~~M~~g 82 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGS-AMAAMAEG 82 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHH-HHHHHHHH
Confidence 34444433444446677777777 699999999843332110 0000 0011 13444444
Q ss_pred HHHHHHHh----CCCeEEEEecChhHHHHHHHHHhCCCccceeEEe
Q 024681 76 LLNILDTL----GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILI 117 (264)
Q Consensus 76 ~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 117 (264)
...+++.+ .++-++-+|-|.|..++.......|--+-++++.
T Consensus 83 a~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 83 AAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 55555543 3567899999999999999998888666666554
No 272
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=66.73 E-value=4.3 Score=32.19 Aligned_cols=38 Identities=16% Similarity=0.237 Sum_probs=28.1
Q ss_pred HHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCcccee
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKL 114 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 114 (264)
...+.+.++.+-++.|-|.|+.+|..+|...++.+..+
T Consensus 102 ~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 102 VKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 34445557778889999999999999998655544443
No 273
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=65.80 E-value=4 Score=32.73 Aligned_cols=39 Identities=15% Similarity=0.194 Sum_probs=28.5
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCcccee
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKL 114 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 114 (264)
+...+.+.++.+-++.|-|.|+.+|..++...++.+..+
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333444446777789999999999999998766555444
No 274
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=64.15 E-value=19 Score=27.26 Aligned_cols=28 Identities=14% Similarity=0.019 Sum_probs=21.6
Q ss_pred HHHHhC-CCeEEEEecChhHHHHHHHHHh
Q 024681 79 ILDTLG-VNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 79 ~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+++... .+++.++|.|-|+.+|-.+|..
T Consensus 84 l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 84 LSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 334443 3689999999999999998865
No 275
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=63.76 E-value=5.6 Score=30.53 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=24.0
Q ss_pred HHHHHHhCCCeEEEEecChhHHHHHHHHHhCC
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
...+.+.++.+-++.|-|.|+.+|..++...+
T Consensus 87 lkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 87 VRTLVEHQLLPRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCH
Confidence 34444457777789999999999998887543
No 276
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=62.31 E-value=14 Score=27.64 Aligned_cols=33 Identities=15% Similarity=0.073 Sum_probs=24.0
Q ss_pred HHHHHHhCCC-eEEEEecChhHHHHHHHHHhCCC
Q 024681 77 LNILDTLGVN-RCAYVGHSVSAMIGLLASIRRPD 109 (264)
Q Consensus 77 ~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~ 109 (264)
...+.+.++. .=.++|.|.|+.++..++...+.
T Consensus 17 l~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 17 LDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3334444555 44899999999999999887654
No 277
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=61.15 E-value=16 Score=26.81 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=24.0
Q ss_pred HHHHHHHhCCC--eEEEEecChhHHHHHHHHHhCC
Q 024681 76 LLNILDTLGVN--RCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 76 ~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+...+.+.++. .-.+.|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 33444445654 4479999999999999988654
No 278
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=60.88 E-value=56 Score=23.00 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=26.2
Q ss_pred CceEEEecCCCCChhhH--HHhhhhc--CCceEEEecC
Q 024681 17 DRILVLAHGFGTDQSAW--QRILPYL--NHHRVIMFDL 50 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~--~~~~~~l--~g~~v~~~d~ 50 (264)
+|.+|++-|+.++..+- ..+.+.| .|++++..|-
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 46899999988876432 4455666 9999999995
No 279
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=58.67 E-value=55 Score=22.23 Aligned_cols=56 Identities=18% Similarity=0.196 Sum_probs=35.2
Q ss_pred Hhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHH
Q 024681 35 RILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLA 103 (264)
Q Consensus 35 ~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 103 (264)
.+...+ .|-.|++.|.+|--.| .+++++.+..+.+ .|.+=..++|-|.|=.=++..
T Consensus 59 ~il~~i~~~~~vi~Ld~~Gk~~s------------Se~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 59 AILAAIPKGSYVVLLDIRGKALS------------SEEFADFLERLRD-DGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHHhcCCCCeEEEEecCCCcCC------------hHHHHHHHHHHHh-cCCeEEEEEeCcccCCHHHHH
Confidence 455566 7889999999875333 4556655554433 343345688999886555444
No 280
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=58.11 E-value=24 Score=27.28 Aligned_cols=20 Identities=15% Similarity=0.175 Sum_probs=16.8
Q ss_pred EEEecChhHHHHHHHHHhCC
Q 024681 89 AYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p 108 (264)
.+.|.|+||.+|+.++...+
T Consensus 35 ~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 35 WIAGTSTGGILALALLHGKS 54 (312)
T ss_pred EEEeeChHHHHHHHHHcCCC
Confidence 57899999999999987543
No 281
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=58.00 E-value=33 Score=28.97 Aligned_cols=47 Identities=13% Similarity=0.263 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEec------ChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 71 AYVDDLLNILDTLGVNRCAYVGH------SVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~G~------S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+...+.+.+.. .++|+++|| |.|+.+++..-+..-.+ .+-++++|.
T Consensus 325 vis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 325 VISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 333444444444 579999999 78999997654443333 677777763
No 282
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=57.54 E-value=11 Score=27.44 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=28.0
Q ss_pred CCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCC
Q 024681 16 GDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLV 51 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~ 51 (264)
+.|+||++.|+.+++ ..-..+...| +|++|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 347999999988876 4567888888 99999999865
No 283
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=56.95 E-value=14 Score=27.62 Aligned_cols=15 Identities=20% Similarity=0.461 Sum_probs=12.5
Q ss_pred CCCeEEEEecChhHH
Q 024681 84 GVNRCAYVGHSVSAM 98 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~ 98 (264)
+.+.|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457899999999974
No 284
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=56.06 E-value=17 Score=27.83 Aligned_cols=29 Identities=14% Similarity=0.102 Sum_probs=22.4
Q ss_pred HHhCCCeEEEEecChhHHHHHHHHHhCCC
Q 024681 81 DTLGVNRCAYVGHSVSAMIGLLASIRRPD 109 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 109 (264)
...++.+-++.|.|.|+.+|..++....+
T Consensus 92 ~e~~l~~~~i~GtSaGAi~aa~~~~~~~~ 120 (298)
T cd07206 92 WEQDLLPRVISGSSAGAIVAALLGTHTDE 120 (298)
T ss_pred HHcCCCCCEEEEEcHHHHHHHHHHcCCcH
Confidence 34466677899999999999998875443
No 285
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=55.94 E-value=24 Score=26.70 Aligned_cols=36 Identities=19% Similarity=0.096 Sum_probs=26.2
Q ss_pred CeEEEEecChhHHHHHHHH---HhCCCccceeEEecCCC
Q 024681 86 NRCAYVGHSVSAMIGLLAS---IRRPDLFTKLILIGASP 121 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a---~~~p~~v~~~vl~~~~~ 121 (264)
.++++.|-|+|+.-+...- ...-+++.+.+..+++.
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 3799999999987665432 22335789999998853
No 286
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=55.92 E-value=57 Score=22.33 Aligned_cols=48 Identities=19% Similarity=0.031 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHh--CCCeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 72 YVDDLLNILDTL--GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 72 ~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
..+.+.++++.+ ..++|.++|-|..|..-+.++...++.+..++=.++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 334444555444 336899999999999988888776676777765554
No 287
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=55.72 E-value=22 Score=26.03 Aligned_cols=68 Identities=15% Similarity=0.135 Sum_probs=45.2
Q ss_pred CCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHH-HHHHHHHhC-CCeEE
Q 024681 16 GDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDD-LLNILDTLG-VNRCA 89 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~ 89 (264)
+.|+||++.|+.++. ..-..+...| +|++|.++.-|. -++...+ +-.+-+.+. ...+.
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt----------------~eE~~~p~lwRfw~~lP~~G~i~ 92 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS----------------DRERTQWYFQRYVQHLPAAGEIV 92 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC----------------HHHHcChHHHHHHHhCCCCCeEE
Confidence 458999999987765 5667888999 999999987552 2222222 234444553 35788
Q ss_pred EEecChhHHH
Q 024681 90 YVGHSVSAMI 99 (264)
Q Consensus 90 l~G~S~Gg~~ 99 (264)
++=-|+=+-+
T Consensus 93 IF~rSwY~~~ 102 (230)
T TIGR03707 93 LFDRSWYNRA 102 (230)
T ss_pred EEeCchhhhH
Confidence 8877765554
No 288
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=55.59 E-value=24 Score=26.12 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=17.9
Q ss_pred EEEecChhHHHHHHHHHhCC
Q 024681 89 AYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p 108 (264)
.+.|-|.|+.++..+|...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998654
No 289
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=55.05 E-value=13 Score=24.23 Aligned_cols=27 Identities=15% Similarity=0.260 Sum_probs=20.1
Q ss_pred CCCCceEEEecCCCCChhhH--HHhhhhc
Q 024681 14 GTGDRILVLAHGFGTDQSAW--QRILPYL 40 (264)
Q Consensus 14 g~~~p~vv~~hG~~~~~~~~--~~~~~~l 40 (264)
.+.+|.|+-+||+.+....| +-+++.|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~l 77 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHL 77 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHH
Confidence 34678999999999988776 3455554
No 290
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=54.89 E-value=79 Score=22.91 Aligned_cols=58 Identities=16% Similarity=0.244 Sum_probs=33.4
Q ss_pred CceEEEecCCCCChhhH-HHhhhhc--CCc-eEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEE
Q 024681 17 DRILVLAHGFGTDQSAW-QRILPYL--NHH-RVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYV 91 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~-~~~~~~l--~g~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (264)
.-+|++.||...++... .-+-..| .|| .|+....-|+ - ..+++.+-++.-+.+++.|+
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y-------------P----~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY-------------P----LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC-------------C----cHHHHHHHHHHcCCceEEEe
Confidence 34888899988777544 4343344 677 5555443322 2 23445555666677766654
No 291
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=54.38 E-value=20 Score=26.84 Aligned_cols=35 Identities=9% Similarity=0.213 Sum_probs=28.8
Q ss_pred CceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCC
Q 024681 17 DRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLV 51 (264)
Q Consensus 17 ~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~ 51 (264)
.|+||++.|+.++. ..-..+...| +|++|.++.-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 48999999987765 5667888999 99999998654
No 292
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=52.71 E-value=82 Score=22.42 Aligned_cols=65 Identities=14% Similarity=0.126 Sum_probs=41.2
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC--CccceeEEe
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP--DLFTKLILI 117 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~ 117 (264)
+++.++.+|-+|.... -.+..+.+..+++......++++--+..+.-.+..+..+- -.+.++|+-
T Consensus 82 ~~~D~vlIDT~Gr~~~------------d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 82 KGYDLVLIDTAGRSPR------------DEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp TTSSEEEEEE-SSSST------------HHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred cCCCEEEEecCCcchh------------hHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 6899999999876422 3456677777777776677777665555555554443332 236777764
No 293
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=52.52 E-value=64 Score=21.99 Aligned_cols=53 Identities=15% Similarity=0.189 Sum_probs=32.1
Q ss_pred HHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHH
Q 024681 34 QRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAM 98 (264)
Q Consensus 34 ~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 98 (264)
..+...+ .+-.+++.|-.|-- + +-+++++.+......-..+=+.++|-+.|=.
T Consensus 58 ~~il~~i~~~~~~i~Ld~~Gk~-----------~-sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~ 111 (155)
T PF02590_consen 58 ERILKKIPPNDYVILLDERGKQ-----------L-SSEEFAKKLERWMNQGKSDIVFIIGGADGLS 111 (155)
T ss_dssp HHHHCTSHTTSEEEEE-TTSEE--------------HHHHHHHHHHHHHTTS-EEEEEE-BTTB--
T ss_pred HHHHhhccCCCEEEEEcCCCcc-----------C-ChHHHHHHHHHHHhcCCceEEEEEecCCCCC
Confidence 3455666 78889999987642 2 3667777777766653324567899999843
No 294
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=52.32 E-value=24 Score=27.26 Aligned_cols=22 Identities=32% Similarity=0.315 Sum_probs=18.9
Q ss_pred CCCeEEEEecChhHHHHHHHHH
Q 024681 84 GVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
+.++..+.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999999888765
No 295
>COG3933 Transcriptional antiterminator [Transcription]
Probab=52.01 E-value=1.1e+02 Score=24.99 Aligned_cols=72 Identities=13% Similarity=0.236 Sum_probs=53.7
Q ss_pred ceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
.+||+.||....+ +...++..| ..=-+.++|+|- .. +..+..+.+.+.+++.+..+=.++=-.||
T Consensus 110 ~vIiiAHG~sTAS-SmaevanrLL~~~~~~aiDMPL------------dv-sp~~vle~l~e~~k~~~~~~GlllLVDMG 175 (470)
T COG3933 110 KVIIIAHGYSTAS-SMAEVANRLLGEEIFIAIDMPL------------DV-SPSDVLEKLKEYLKERDYRSGLLLLVDMG 175 (470)
T ss_pred eEEEEecCcchHH-HHHHHHHHHhhccceeeecCCC------------cC-CHHHHHHHHHHHHHhcCccCceEEEEecc
Confidence 4899999976544 456677777 666788999861 12 47888899999999888777677777899
Q ss_pred HHHHHHH
Q 024681 97 AMIGLLA 103 (264)
Q Consensus 97 g~~a~~~ 103 (264)
...+..=
T Consensus 176 SL~~f~~ 182 (470)
T COG3933 176 SLTSFGS 182 (470)
T ss_pred hHHHHHH
Confidence 8776643
No 296
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=51.20 E-value=61 Score=20.53 Aligned_cols=72 Identities=11% Similarity=0.127 Sum_probs=47.8
Q ss_pred eEEEecCCCCChhhHHHhhhhc--C-CceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhC-CCeEEEEecC
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--N-HHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLG-VNRCAYVGHS 94 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S 94 (264)
.||.-|| .-+......++.+ . .-.+.++++.-. .+.+++.+.+.+.++..+ .+.+.++--=
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~~-------------~~~~~~~~~l~~~i~~~~~~~~vlil~Dl 66 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYPD-------------ESIEDFEEKLEEAIEELDEGDGVLILTDL 66 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETTT-------------SCHHHHHHHHHHHHHHCCTTSEEEEEESS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcCC-------------CCHHHHHHHHHHHHHhccCCCcEEEEeeC
Confidence 5788899 4445566666666 4 346777775311 158889999999998886 4567777766
Q ss_pred hhHHHHHHHHH
Q 024681 95 VSAMIGLLASI 105 (264)
Q Consensus 95 ~Gg~~a~~~a~ 105 (264)
+||.....++.
T Consensus 67 ~ggsp~n~a~~ 77 (116)
T PF03610_consen 67 GGGSPFNEAAR 77 (116)
T ss_dssp TTSHHHHHHHH
T ss_pred CCCccchHHHH
Confidence 66665544443
No 297
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=50.39 E-value=1.3e+02 Score=24.38 Aligned_cols=101 Identities=11% Similarity=0.002 Sum_probs=56.8
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCCCCCCCCCcccc--hHHHHHHHHHHHHHHhCCCeEEEEecC
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYT--TLDAYVDDLLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~G~S 94 (264)
+++++--..+..+.-....+.+ .++-|+-.|..++=.--....+...|. +++.+.+++......-....-+|.|--
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g 129 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPG 129 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecC
Confidence 5555554334333333344444 888888888876633211111123332 355555555444333233456788899
Q ss_pred hhHHHHHHHHHhCCC-ccceeEEecC
Q 024681 95 VSAMIGLLASIRRPD-LFTKLILIGA 119 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p~-~v~~~vl~~~ 119 (264)
-||.+++..+++-|+ .+.+.+.+++
T Consensus 130 ~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 130 QGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred CCcHHHHHHHhhChhhhhcCccCCCC
Confidence 999999999988775 3445555444
No 298
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=49.61 E-value=32 Score=23.30 Aligned_cols=28 Identities=21% Similarity=0.151 Sum_probs=20.4
Q ss_pred HHHHHHhCC--CeEEEEecChhHHHHHHHH
Q 024681 77 LNILDTLGV--NRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 77 ~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a 104 (264)
...+++.+. ..-.+.|.|.|+.++..++
T Consensus 17 l~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 17 LSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 333444444 4567889999999999988
No 299
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=49.35 E-value=32 Score=25.54 Aligned_cols=20 Identities=20% Similarity=0.152 Sum_probs=17.4
Q ss_pred EEEecChhHHHHHHHHHhCC
Q 024681 89 AYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p 108 (264)
.+.|-|.|+.+|..+|...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999988654
No 300
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=48.74 E-value=33 Score=25.54 Aligned_cols=22 Identities=18% Similarity=0.152 Sum_probs=18.6
Q ss_pred eEEEEecChhHHHHHHHHHhCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 4469999999999999987655
No 301
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=48.46 E-value=1.1e+02 Score=22.61 Aligned_cols=36 Identities=19% Similarity=0.141 Sum_probs=23.6
Q ss_pred CCceEEEecCCC--CChhhH-HHhhhhc--CCceEEEecCC
Q 024681 16 GDRILVLAHGFG--TDQSAW-QRILPYL--NHHRVIMFDLV 51 (264)
Q Consensus 16 ~~p~vv~~hG~~--~~~~~~-~~~~~~l--~g~~v~~~d~~ 51 (264)
+.|.|+||+=.. .....| +.+.+.+ .|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 346899999766 334444 3344555 68888888765
No 302
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=47.37 E-value=63 Score=23.00 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=31.9
Q ss_pred CCceEEEecCCCCCh---hhHHHhhhhc--CCceEEEecCC--CCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Q 024681 16 GDRILVLAHGFGTDQ---SAWQRILPYL--NHHRVIMFDLV--CAGSVNPDYFDFRRYTTLDAYVDDLLNILDT 82 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~---~~~~~~~~~l--~g~~v~~~d~~--g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.++|++++||..... ..-..+...| .|..+...-++ |||...+. ...+..+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~--------~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE--------NRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH--------HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch--------hHHHHHHHHHHHHHH
Confidence 357999999976532 3334556666 55555444444 55444321 233455555555543
No 303
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=47.08 E-value=94 Score=23.75 Aligned_cols=70 Identities=21% Similarity=0.320 Sum_probs=44.5
Q ss_pred ceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCC--------CCCC--CCCCCC-CcccchHHHHHHHHHHHHHHhC
Q 024681 18 RILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVC--------AGSV--NPDYFD-FRRYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 18 p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g--------~G~s--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 84 (264)
|.|+|.-|.++. .+.| .||.|+..|+-= .|.. -..+.+ ..-|.+.+.+.+-+.+.++..|
T Consensus 253 Pmi~fakG~g~~-------Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG 325 (359)
T KOG2872|consen 253 PMILFAKGSGGA-------LEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFG 325 (359)
T ss_pred ceEEEEcCcchH-------HHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhC
Confidence 788888886653 4455 899999999831 1221 011112 2346678888888899999888
Q ss_pred CCeE-EEEecC
Q 024681 85 VNRC-AYVGHS 94 (264)
Q Consensus 85 ~~~~-~l~G~S 94 (264)
.++. .=+||.
T Consensus 326 ~~ryI~NLGHG 336 (359)
T KOG2872|consen 326 KSRYIANLGHG 336 (359)
T ss_pred ccceEEecCCC
Confidence 6543 335664
No 304
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=46.72 E-value=36 Score=25.35 Aligned_cols=22 Identities=14% Similarity=-0.040 Sum_probs=18.4
Q ss_pred eEEEEecChhHHHHHHHHHhCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568899999999999988654
No 305
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=45.76 E-value=90 Score=21.40 Aligned_cols=59 Identities=15% Similarity=0.142 Sum_probs=42.4
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+..++++...-|.-.+....+++.+.+.+ .++.++--+|.....++...+.+.+..++.
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l~~-KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~ 97 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKLKG-KKVALFGTAGAGPDSEYAKKILKNVEALLP 97 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHccC-CeEEEEEecCCCCchHHHHHHHHHHHHhhc
Confidence 44678888788887777888888888887 677787767766655555666666666553
No 306
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=45.54 E-value=29 Score=28.22 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=24.1
Q ss_pred cCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCCCCcccc
Q 024681 205 VPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIEGHLPHL 248 (264)
Q Consensus 205 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 248 (264)
..+++..|+.|+....... +........++|++++|+.-+
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDSSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCC----CCCCCCcccEEECCCeeeccc
Confidence 4789999999999876622 222332556789999997544
No 307
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=44.22 E-value=39 Score=23.03 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=24.7
Q ss_pred CceEEEecCCCCChhh--HHHhhhhc--CCceEEEecCC
Q 024681 17 DRILVLAHGFGTDQSA--WQRILPYL--NHHRVIMFDLV 51 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~--~~~~~~~l--~g~~v~~~d~~ 51 (264)
+|.+|++-|..++... -..+.+.| .|+.++.+|--
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 3689999998887653 24555666 89999999853
No 308
>PRK04148 hypothetical protein; Provisional
Probab=44.05 E-value=49 Score=21.87 Aligned_cols=44 Identities=7% Similarity=-0.021 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecC
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
+++.+.+.+......++..+|-..|..+|..++... ..++.++-
T Consensus 4 i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 4 IAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred HHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 334444333332335799999999988888888542 35666665
No 309
>COG3621 Patatin [General function prediction only]
Probab=42.25 E-value=95 Score=24.29 Aligned_cols=53 Identities=15% Similarity=0.214 Sum_probs=32.5
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCC----eEE-EEecChhHHHHHHHHHhCC
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVN----RCA-YVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-l~G~S~Gg~~a~~~a~~~p 108 (264)
..|++..+|--|.- -.+...+...+++.... .+. +-|.|.||.+++.+|...+
T Consensus 7 sk~rIlsldGGGvr---------------G~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 7 SKYRILSLDGGGVR---------------GAILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred cceeEEEecCCccc---------------cHHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 56788888743321 12344445555554322 344 5589999999999987543
No 310
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=41.71 E-value=48 Score=21.29 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEecChhHHHHH
Q 024681 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMIGL 101 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 101 (264)
.....+.-.+..++.+.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 3566677778888999999999987666544
No 311
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.37 E-value=43 Score=24.86 Aligned_cols=18 Identities=11% Similarity=0.270 Sum_probs=16.0
Q ss_pred EEEEecChhHHHHHHHHH
Q 024681 88 CAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~ 105 (264)
-.+.|-|.|+.+|..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 379999999999999984
No 312
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=39.74 E-value=94 Score=21.89 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=21.0
Q ss_pred EEEecCCCCCCCCCCCCCCccc---chHHHHHHHHHHHHHHhCC
Q 024681 45 VIMFDLVCAGSVNPDYFDFRRY---TTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 45 v~~~d~~g~G~s~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 85 (264)
++++| ||||..++........ .-..+++.-+...++..|.
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA 44 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 57777 8999886532221111 1122445555566666553
No 313
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=39.61 E-value=1.6e+02 Score=22.01 Aligned_cols=40 Identities=18% Similarity=0.249 Sum_probs=22.4
Q ss_pred EeCCCCceEEEecCCCCChhh-HHHhhhhc--CCc-eEEEecCC
Q 024681 12 VVGTGDRILVLAHGFGTDQSA-WQRILPYL--NHH-RVIMFDLV 51 (264)
Q Consensus 12 ~~g~~~p~vv~~hG~~~~~~~-~~~~~~~l--~g~-~v~~~d~~ 51 (264)
..|...|.|++++-.+..... .....+.| .|+ .|-.++.+
T Consensus 23 lag~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 23 RAGGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred HhCCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 345556789999976655433 33344444 455 34445543
No 314
>PF15566 Imm18: Immunity protein 18
Probab=39.28 E-value=47 Score=17.68 Aligned_cols=31 Identities=13% Similarity=0.076 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEecChhHHH
Q 024681 69 LDAYVDDLLNILDTLGVNRCAYVGHSVSAMI 99 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 99 (264)
+.-+++++..+......+.++++--||||.-
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~E 34 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGEE 34 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceeccccccccc
Confidence 5667778888877776678999999999963
No 315
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=39.14 E-value=1.3e+02 Score=22.14 Aligned_cols=38 Identities=29% Similarity=0.294 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 68 TLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
++..+..|+..-+...|.++++++..--|-.-++..+.
T Consensus 83 t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~ 120 (237)
T PF02633_consen 83 TLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAA 120 (237)
T ss_dssp HHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHH
Confidence 56777777777777779999998876666554555444
No 316
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=38.56 E-value=1.4e+02 Score=21.57 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=32.0
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEecCC
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLKIE 242 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (264)
..|++++.|..+...+.+..+.+.+.+.+ --+..++.+
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~-GGfl~~D~~ 90 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLEN-GGFLLFDDR 90 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHc-CCEEEEECC
Confidence 57999999999998888889999999887 567777755
No 317
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=38.05 E-value=39 Score=25.63 Aligned_cols=78 Identities=12% Similarity=0.156 Sum_probs=42.1
Q ss_pred eEEEecCCCCChhhHH-Hhhhhc--CCc-------eEEEecCCCCCCCCCCCCCCcccchHHHHH--------HHHHHHH
Q 024681 19 ILVLAHGFGTDQSAWQ-RILPYL--NHH-------RVIMFDLVCAGSVNPDYFDFRRYTTLDAYV--------DDLLNIL 80 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~-~~~~~l--~g~-------~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~--------~~~~~~~ 80 (264)
.-|++.|.|...-.-. -+...+ .|. +++.+|..|-=..+... ...+ -..++ .++.+++
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~--l~~~--~~~~a~~~~~~~~~~L~e~i 101 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD--LTPF--KKPFARKDEEKEGKSLLEVV 101 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc--chHH--HHHHHhhcCcccCCCHHHHH
Confidence 3456667666554333 333444 466 89999998853332211 1111 12222 2455555
Q ss_pred HHhCCCeEEEEecCh-hHHHHHH
Q 024681 81 DTLGVNRCAYVGHSV-SAMIGLL 102 (264)
Q Consensus 81 ~~~~~~~~~l~G~S~-Gg~~a~~ 102 (264)
+.+ ++-+|+|-|- ||.+.-.
T Consensus 102 ~~v--~ptvlIG~S~~~g~ft~e 122 (279)
T cd05312 102 KAV--KPTVLIGLSGVGGAFTEE 122 (279)
T ss_pred Hhc--CCCEEEEeCCCCCCCCHH
Confidence 554 5779999995 6755543
No 318
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=37.78 E-value=42 Score=17.17 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=21.3
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHH
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILD 81 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
.+|.+..+|+||.--... |.++..+.+.+++.
T Consensus 12 ~~y~~~~pdlpg~~t~G~---------t~eea~~~~~eal~ 43 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFTQGD---------TLEEALENAKEALE 43 (48)
T ss_dssp SSEEEEETTCCTCEEEES---------SHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhhcCC---------CHHHHHHHHHHHHH
Confidence 578899999998742111 46777766666554
No 319
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=37.36 E-value=33 Score=27.00 Aligned_cols=18 Identities=17% Similarity=0.182 Sum_probs=15.7
Q ss_pred EEEecChhHHHHHHHHHh
Q 024681 89 AYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~ 106 (264)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 578999999999999864
No 320
>COG0218 Predicted GTPase [General function prediction only]
Probab=37.16 E-value=68 Score=22.95 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=31.5
Q ss_pred CcccCEEEEecCCCCCcchhhH---HHHHHHcCCC--ce--EEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 202 LVRVPCVIIQTSKDVSVPVSVA---EYLQRHLGGR--NT--VELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 202 ~i~~P~l~i~g~~D~~~~~~~~---~~~~~~~~~~--~~--~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
...+|++++.-.-|.+-..+.. ...++.+... .. +..++-..... -+++.+.|.+++.
T Consensus 133 ~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G----i~~l~~~i~~~~~ 197 (200)
T COG0218 133 ELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG----IDELKAKILEWLK 197 (200)
T ss_pred HcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC----HHHHHHHHHHHhh
Confidence 3478999999999998765443 3334333211 12 44444222211 3556666666653
No 321
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=36.82 E-value=63 Score=21.55 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEecChhHHH
Q 024681 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMI 99 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 99 (264)
+....+.-.+..++.+.++++||+-=|.+
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~ 69 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGML 69 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcce
Confidence 34556777778889999999999854443
No 322
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=36.53 E-value=65 Score=16.89 Aligned_cols=24 Identities=13% Similarity=0.321 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEe
Q 024681 69 LDAYVDDLLNILDTLGVNRCAYVG 92 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~G 92 (264)
.+.+..|+...+..+.+..+.++|
T Consensus 8 PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 8 PQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred cHHHHHHHHHHHhcceeeeEEecc
Confidence 678899999999999888888887
No 323
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=36.52 E-value=50 Score=27.41 Aligned_cols=52 Identities=12% Similarity=0.142 Sum_probs=32.4
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeE-----EEEecChhHHHHHHHHHhC
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRC-----AYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~G~S~Gg~~a~~~a~~~ 107 (264)
+|.+++.+|--|. . --..-++..-++.+..+|+ .+.|.|.||.+|.++...+
T Consensus 415 ~G~rILSiDGGGt--r-------------G~~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 415 QGLRILSIDGGGT--R-------------GLATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred CceEEEEecCCCc--c-------------chhHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 6889999984332 1 0122233334444544565 3789999999999887653
No 324
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.46 E-value=34 Score=26.04 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=16.6
Q ss_pred EEEecChhHHHHHHHHHhC
Q 024681 89 AYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~ 107 (264)
.+.|.|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6889999999999998654
No 325
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=36.43 E-value=1e+02 Score=19.65 Aligned_cols=32 Identities=28% Similarity=0.330 Sum_probs=24.5
Q ss_pred eEEEEe-cChhHHHHHHHHHhCCCccceeEEecC
Q 024681 87 RCAYVG-HSVSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 87 ~~~l~G-~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
++.++| ..+.|...+.+...+|+ ++-+.+++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 578999 99999988888888875 555555554
No 326
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=36.26 E-value=2.3e+02 Score=22.93 Aligned_cols=92 Identities=18% Similarity=0.124 Sum_probs=48.1
Q ss_pred eEEEecCCCCCh---hhHHHhhhhc--CCceEEEecCCCC--CCCCCCCCCCcccchHHHHHHHHHHHHHH---hCCCeE
Q 024681 19 ILVLAHGFGTDQ---SAWQRILPYL--NHHRVIMFDLVCA--GSVNPDYFDFRRYTTLDAYVDDLLNILDT---LGVNRC 88 (264)
Q Consensus 19 ~vv~~hG~~~~~---~~~~~~~~~l--~g~~v~~~d~~g~--G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 88 (264)
++|+++-..... .....-+..| .|+.|+-+..--+ |+... ....+.+++.+.+...+.. +...++
T Consensus 114 plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~-----g~~~~~~~i~~~v~~~~~~~~~~~~~~v 188 (390)
T TIGR00521 114 PIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGK-----GRLAEPETIVKAAEREFSPKEDLEGKRV 188 (390)
T ss_pred CEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccC-----CCCCCHHHHHHHHHHHHhhccccCCceE
Confidence 566666533222 2334445556 6777665542212 33322 1122578888888777644 433566
Q ss_pred EEEec---------------C---hhHHHHHHHHHhCCCccceeEEecC
Q 024681 89 AYVGH---------------S---VSAMIGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 89 ~l~G~---------------S---~Gg~~a~~~a~~~p~~v~~~vl~~~ 119 (264)
.+.|- | +|..+|..++.+- ..++++..
T Consensus 189 lit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g 233 (390)
T TIGR00521 189 LITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITG 233 (390)
T ss_pred EEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCC
Confidence 66665 3 5566666666542 34555554
No 327
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=35.55 E-value=34 Score=26.35 Aligned_cols=17 Identities=24% Similarity=0.403 Sum_probs=15.1
Q ss_pred EEEecChhHHHHHHHHH
Q 024681 89 AYVGHSVSAMIGLLASI 105 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~ 105 (264)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47899999999999886
No 328
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.53 E-value=97 Score=23.92 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCC----CeEEEEecC--hhHHHHHHHHHh
Q 024681 73 VDDLLNILDTLGV----NRCAYVGHS--VSAMIGLLASIR 106 (264)
Q Consensus 73 ~~~~~~~~~~~~~----~~~~l~G~S--~Gg~~a~~~a~~ 106 (264)
...+.+++++.++ +++.++|.| +|-.+|..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 4556677777654 589999996 999999988764
No 329
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=35.46 E-value=1.3e+02 Score=23.07 Aligned_cols=43 Identities=21% Similarity=0.301 Sum_probs=23.4
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccc---hHHHHHHHHHHHHHHhC
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYT---TLDAYVDDLLNILDTLG 84 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 84 (264)
.+-.+|++| ||||..++......... -.-+++..+.+.++..+
T Consensus 54 ~~~~~IvID-pGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G 99 (287)
T PRK10319 54 GGKRVVMLD-PGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHG 99 (287)
T ss_pred CCCeEEEEE-CCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCC
Confidence 344688999 89998865332222211 12244455556665544
No 330
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=35.26 E-value=34 Score=23.61 Aligned_cols=21 Identities=19% Similarity=0.140 Sum_probs=16.9
Q ss_pred CeEEEEecChhHHHHHHHHHh
Q 024681 86 NRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
..-.+.|-|.||.+|+.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 455789999999999888765
No 331
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=35.16 E-value=1.6e+02 Score=25.58 Aligned_cols=41 Identities=20% Similarity=0.207 Sum_probs=26.4
Q ss_pred CceEEEecCCCCCh---hhHHHhhhhc--CCceEEEecCCC--CCCCC
Q 024681 17 DRILVLAHGFGTDQ---SAWQRILPYL--NHHRVIMFDLVC--AGSVN 57 (264)
Q Consensus 17 ~p~vv~~hG~~~~~---~~~~~~~~~l--~g~~v~~~d~~g--~G~s~ 57 (264)
+.+++++||..... ..-..+...| .|..|-.+-+|+ |+.+.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 45899999966543 3445566777 677666655654 55554
No 332
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=34.80 E-value=1.5e+02 Score=24.81 Aligned_cols=46 Identities=22% Similarity=0.196 Sum_probs=26.0
Q ss_pred HHHHHHHHhC--CCeEEEEecChhHHHH-HHHHH-hCCCccceeEEecCC
Q 024681 75 DLLNILDTLG--VNRCAYVGHSVSAMIG-LLASI-RRPDLFTKLILIGAS 120 (264)
Q Consensus 75 ~~~~~~~~~~--~~~~~l~G~S~Gg~~a-~~~a~-~~p~~v~~~vl~~~~ 120 (264)
.+.+-+...| .+++.|+|.|.|+.-. +++.+ .-...++..|+-+++
T Consensus 205 WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS 254 (601)
T KOG4389|consen 205 WVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGS 254 (601)
T ss_pred HHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCC
Confidence 3444455554 3589999999998543 33322 111245566665553
No 333
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=34.32 E-value=48 Score=34.02 Aligned_cols=29 Identities=21% Similarity=0.310 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHH
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 104 (264)
+..+++..|+++-.++|||+|=+.|+.+|
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 34556777899999999999998887765
No 334
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.10 E-value=2.5e+02 Score=23.55 Aligned_cols=86 Identities=14% Similarity=0.249 Sum_probs=51.4
Q ss_pred EEecCCCCChhhHHHh-hhhc--CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhH
Q 024681 21 VLAHGFGTDQSAWQRI-LPYL--NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSA 97 (264)
Q Consensus 21 v~~hG~~~~~~~~~~~-~~~l--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 97 (264)
+|=-|++.+...-..- +++- +||.|+.+|-.|.-... ..+...+..+++.-..+.|..||--+=|
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~------------~~lm~~l~k~~~~~~pd~i~~vgealvg 509 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNN------------APLMTSLAKLIKVNKPDLILFVGEALVG 509 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCC------------hhHHHHHHHHHhcCCCceEEEehhhhhC
Confidence 3344666654433322 2333 89999999987753332 2355566677777777889888887766
Q ss_pred HHHHHHHHh---------CCCccceeEEec
Q 024681 98 MIGLLASIR---------RPDLFTKLILIG 118 (264)
Q Consensus 98 ~~a~~~a~~---------~p~~v~~~vl~~ 118 (264)
.=++.-+.. .|..++++++--
T Consensus 510 ~dsv~q~~~fn~al~~~~~~r~id~~~ltk 539 (587)
T KOG0781|consen 510 NDSVDQLKKFNRALADHSTPRLIDGILLTK 539 (587)
T ss_pred cHHHHHHHHHHHHHhcCCCccccceEEEEe
Confidence 555443322 234566666543
No 335
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=34.04 E-value=50 Score=25.92 Aligned_cols=19 Identities=16% Similarity=0.086 Sum_probs=15.3
Q ss_pred EEEEecChhHHHHHHHHHh
Q 024681 88 CAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~ 106 (264)
-.++|||+|=+.|+.++..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3679999999988887643
No 336
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=33.39 E-value=2.4e+02 Score=22.19 Aligned_cols=79 Identities=10% Similarity=0.056 Sum_probs=46.4
Q ss_pred EEecCCCCChhhHHHhhhhc-CC---ceEEEecCCCCCCCCC----------CCCCCcccchHHHHHHHHHHHHHHhC-C
Q 024681 21 VLAHGFGTDQSAWQRILPYL-NH---HRVIMFDLVCAGSVNP----------DYFDFRRYTTLDAYVDDLLNILDTLG-V 85 (264)
Q Consensus 21 v~~hG~~~~~~~~~~~~~~l-~g---~~v~~~d~~g~G~s~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 85 (264)
|+++|+|+-......++..+ .. +.|++++--.-+-+-. .........+..+.++.+...++... .
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 136 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRPSP 136 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccCCC
Confidence 78899998888888888877 44 7888887211111100 00000001124445555555555543 4
Q ss_pred CeEEEEecChhHHH
Q 024681 86 NRCAYVGHSVSAMI 99 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~ 99 (264)
.+++|+=|+.=|..
T Consensus 137 ~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 137 PPLYLVIHNIDGPS 150 (326)
T ss_pred CceEEEEECCCChh
Confidence 68999999998765
No 337
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=32.89 E-value=1.4e+02 Score=20.15 Aligned_cols=49 Identities=12% Similarity=0.108 Sum_probs=32.2
Q ss_pred HHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 74 DDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 74 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
.++.+.++..+++.++++|-+....+...+........+-.|+.+....
T Consensus 88 t~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~s 136 (155)
T cd01014 88 TDLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACAT 136 (155)
T ss_pred CCHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEecccccC
Confidence 3667778888999999999998765554433322223556666665433
No 338
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=32.88 E-value=1.6e+02 Score=20.13 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=30.3
Q ss_pred hhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHH
Q 024681 36 ILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMI 99 (264)
Q Consensus 36 ~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 99 (264)
+...+ .+-.+++.|-+|--. +-+++++.+....+.-..+-+.++|-+.|=.-
T Consensus 60 il~~l~~~~~~i~LDe~Gk~~------------sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~ 112 (157)
T PRK00103 60 ILAALPKGARVIALDERGKQL------------SSEEFAQELERWRDDGRSDVAFVIGGADGLSP 112 (157)
T ss_pred HHhhCCCCCEEEEEcCCCCcC------------CHHHHHHHHHHHHhcCCccEEEEEcCccccCH
Confidence 44455 555688888776432 25566666665533222245678888877443
No 339
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.78 E-value=80 Score=22.16 Aligned_cols=32 Identities=19% Similarity=0.140 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHHHH
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLA 103 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 103 (264)
....+.-.+..++.+.++++|||-=|.+...+
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 45566677778999999999999877766554
No 340
>PRK14974 cell division protein FtsY; Provisional
Probab=32.70 E-value=2.5e+02 Score=22.20 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=41.1
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCC--CccceeEEe
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRP--DLFTKLILI 117 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~ 117 (264)
.++.++.+|-.|.... -..+.+.+..+.+..+.+.++++.-+.-|.-+..-+..+. -.+.++|+-
T Consensus 221 ~~~DvVLIDTaGr~~~------------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 221 RGIDVVLIDTAGRMHT------------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCCEEEEECCCccCC------------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 6788999998866432 2334555566666666667778877766666665555442 246666664
No 341
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=32.68 E-value=1.4e+02 Score=19.98 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHH
Q 024681 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 104 (264)
......+.-.+..++.+.++++||+-=|.+...+.
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 45666777788888999999999998888775444
No 342
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=32.56 E-value=2.9e+02 Score=22.83 Aligned_cols=65 Identities=11% Similarity=0.159 Sum_probs=41.7
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCC--ccceeEEe
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPD--LFTKLILI 117 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~ 117 (264)
.+|.++.+|-+|.-.. -+.+.+.+..+.+......+++|--++-|.-+...|..+.+ .+.++|+-
T Consensus 181 ~~~DvViIDTaGr~~~------------d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 181 ENFDIIIVDTSGRHKQ------------EDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCCEEEEECCCCCcc------------hHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 5899999999875222 23355556666666666778888777777666666555432 35666653
No 343
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=32.56 E-value=1.9e+02 Score=22.12 Aligned_cols=48 Identities=19% Similarity=0.155 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhCCC---eEEEEecChhHHHHHHHHHhCCCccceeEEe
Q 024681 69 LDAYVDDLLNILDTLGVN---RCAYVGHSVSAMIGLLASIRRPDLFTKLILI 117 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~---~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 117 (264)
-+....-+..+++.++++ .+.=+|..||+.+ ..+|.++..+|-++-+.
T Consensus 54 ~eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 54 EEAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCC
Confidence 344555667777888664 5667899999874 55666665556555443
No 344
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=32.44 E-value=1.4e+02 Score=21.33 Aligned_cols=41 Identities=20% Similarity=0.224 Sum_probs=30.7
Q ss_pred HHHHHHhCCCeEEEEe-cChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 77 LNILDTLGVNRCAYVG-HSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G-~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+..+.+...++.++| -.+|+.++..++.. .+..+++++..
T Consensus 13 ~~~q~~L~~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 13 PKIVQKLEQATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHHHhCCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 3445666667899888 55888888888764 37789999875
No 345
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=32.27 E-value=65 Score=17.83 Aligned_cols=29 Identities=17% Similarity=-0.148 Sum_probs=22.8
Q ss_pred eEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 235 TVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 235 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+...+-++.++.-.|.++++.+.+.+|-+
T Consensus 28 TvItL~~G~k~vV~Es~~eVi~ki~~y~~ 56 (60)
T PF06289_consen 28 TVITLTNGKKYVVKESVEEVIEKIIEYRR 56 (60)
T ss_pred eEEEEeCCCEEEEECCHHHHHHHHHHHHH
Confidence 55566656778888999999999998864
No 346
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=31.78 E-value=82 Score=27.86 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=23.0
Q ss_pred HHHHHHHHHH---HhCCCeEEEEecChhHHHHHHHHH
Q 024681 72 YVDDLLNILD---TLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 72 ~~~~~~~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
.-.++...++ ..++.--++.|.|+||.++..+|.
T Consensus 49 ~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 49 VYGALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 3334444444 334455678999999999988886
No 347
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=31.70 E-value=3e+02 Score=22.76 Aligned_cols=48 Identities=15% Similarity=0.181 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCc--cceeEEe
Q 024681 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDL--FTKLILI 117 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~vl~ 117 (264)
+++.+.+.++-+.++.+.+.+|--++=|.-|...|..+.+. +.++|+-
T Consensus 198 e~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 55667777777788888999999999999999998887654 5677764
No 348
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=31.68 E-value=1.4e+02 Score=18.82 Aligned_cols=78 Identities=13% Similarity=0.112 Sum_probs=46.1
Q ss_pred CCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecC
Q 024681 16 GDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 94 (264)
..|+|+|.--+..-......+...+ ..+.|+-+|...+| .++.+.+..+-..-....+++-|.+
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g---------------~eiq~~l~~~tg~~tvP~vFI~Gk~ 77 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDG---------------SEIQKALKKLTGQRTVPNVFIGGKF 77 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCc---------------HHHHHHHHHhcCCCCCCEEEECCEE
Confidence 4578888875444444444555556 67788888865322 2333333333222244578888999
Q ss_pred hhHHHHHHHHHhCC
Q 024681 95 VSAMIGLLASIRRP 108 (264)
Q Consensus 95 ~Gg~~a~~~a~~~p 108 (264)
.||.--+.......
T Consensus 78 iGG~~dl~~lh~~G 91 (104)
T KOG1752|consen 78 IGGASDLMALHKSG 91 (104)
T ss_pred EcCHHHHHHHHHcC
Confidence 99987766655443
No 349
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=31.67 E-value=60 Score=21.32 Aligned_cols=21 Identities=29% Similarity=0.597 Sum_probs=13.2
Q ss_pred eeeEEEEeCC---CCc--------eEEEecCC
Q 024681 6 EALHVRVVGT---GDR--------ILVLAHGF 26 (264)
Q Consensus 6 ~~~~~~~~g~---~~p--------~vv~~hG~ 26 (264)
+.+.|+..+. |+| .+||+||-
T Consensus 35 ~G~rfR~~~~~lpGkPDiVl~~y~~viFvHGC 66 (150)
T COG3727 35 QGLRFRVQDKDLPGKPDIVLPKYRCVIFVHGC 66 (150)
T ss_pred cceEEEecCCCCCCCCCEeecCceEEEEEeee
Confidence 3456666553 333 78999993
No 350
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=31.63 E-value=55 Score=24.62 Aligned_cols=41 Identities=20% Similarity=0.060 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCeE-EEEecChhHHHHHHHHHhCCCccceeEE
Q 024681 75 DLLNILDTLGVNRC-AYVGHSVSAMIGLLASIRRPDLFTKLIL 116 (264)
Q Consensus 75 ~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl 116 (264)
-+.++++.-. .++ .++|.|+|+.-+..+.++.+.+-++++.
T Consensus 29 VLD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 29 VLDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 3444553332 344 4679999999999999888876555443
No 351
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=31.53 E-value=71 Score=24.89 Aligned_cols=57 Identities=16% Similarity=0.167 Sum_probs=39.8
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHc-----------------------------CCCceEEEecCCCCcccccChhcH
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHL-----------------------------GGRNTVELLKIEGHLPHLSAPAIV 254 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~gH~~~~~~~~~~ 254 (264)
.+.|.+..|..|.++.....+.+.+++ .+ ..+..++.+||+...++|+..
T Consensus 325 Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktykn-l~f~wilraghmvp~Dnp~~a 403 (414)
T KOG1283|consen 325 GVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKN-LSFFWILRAGHMVPADNPAAA 403 (414)
T ss_pred CceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhcc-ceeEEeecccCcccCCCHHHH
Confidence 467888888888887655554444432 33 456667789999999999877
Q ss_pred HHHHHHH
Q 024681 255 GPVIRRA 261 (264)
Q Consensus 255 ~~~i~~f 261 (264)
...++.+
T Consensus 404 ~hmlr~v 410 (414)
T KOG1283|consen 404 SHMLRHV 410 (414)
T ss_pred hhheeec
Confidence 6665544
No 352
>PRK03031 rnpA ribonuclease P; Reviewed
Probab=30.85 E-value=1.5e+02 Score=19.14 Aligned_cols=39 Identities=13% Similarity=0.307 Sum_probs=27.1
Q ss_pred hhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 36 ILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 36 ~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
....| .|+.++.+=.++.... ++.++.+++..+++..+.
T Consensus 78 ~~~~l~~g~diVvi~r~~~~~~-----------~~~~l~~~l~~ll~k~~~ 117 (122)
T PRK03031 78 LLPRIAPGWDLVIIVKPTAAEC-----------NYEQFLQELEQLLIQAEI 117 (122)
T ss_pred hhhccCCCceEEEEECCCcccC-----------CHHHHHHHHHHHHHHccC
Confidence 33455 6888887766654322 488899999999988763
No 353
>PRK05723 flavodoxin; Provisional
Probab=30.77 E-value=92 Score=21.05 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=13.3
Q ss_pred hHHHHHHHHHHHHHHhCCCeE
Q 024681 68 TLDAYVDDLLNILDTLGVNRC 88 (264)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~ 88 (264)
.+-..++.+.+.+..+|.+++
T Consensus 100 ~Fc~a~~~ld~~L~~lGA~rv 120 (151)
T PRK05723 100 TFCGGGEQMRELFAELGVREV 120 (151)
T ss_pred HHhHHHHHHHHHHHHCCCcEe
Confidence 355666777777777765444
No 354
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=30.59 E-value=60 Score=26.26 Aligned_cols=59 Identities=14% Similarity=0.081 Sum_probs=31.4
Q ss_pred ccCEEEEecCCCCCcchhhHHHHHHHc-CCC--ceEEEecCCCCc---ccccChhcHHHHHHHHhc
Q 024681 204 RVPCVIIQTSKDVSVPVSVAEYLQRHL-GGR--NTVELLKIEGHL---PHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 204 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~--~~~~~~~~~gH~---~~~~~~~~~~~~i~~fl~ 263 (264)
..|++++.|.-|.+-+ +....+.+.+ +.. .-.+.+||.|+. ...++.+.+.+.+.+||.
T Consensus 189 p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~ 253 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLA 253 (411)
T ss_dssp -EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHH
T ss_pred CCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHh
Confidence 5799999999998763 3334444433 222 334457888774 333445677788888774
No 355
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=30.22 E-value=2.5e+02 Score=24.81 Aligned_cols=89 Identities=12% Similarity=0.162 Sum_probs=51.6
Q ss_pred eEEEecCCCC--ChhhHHHhhhhc-CCceEEE-----ecCCCCCCCCCCCCCCcccc--hHHHHHHHHHHHHHHhCCCeE
Q 024681 19 ILVLAHGFGT--DQSAWQRILPYL-NHHRVIM-----FDLVCAGSVNPDYFDFRRYT--TLDAYVDDLLNILDTLGVNRC 88 (264)
Q Consensus 19 ~vv~~hG~~~--~~~~~~~~~~~l-~g~~v~~-----~d~~g~G~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 88 (264)
.|.++|..-. +-..-..+++.+ .+..|.+ +.++.+.+..... ...|. -...+.+.+...++..+.+--
T Consensus 157 AVs~~~S~~NP~HE~~v~eiire~~~~i~V~~shev~p~~~~~eR~~Tav--lnA~L~pi~~~yl~~v~~~l~~~g~~~~ 234 (674)
T COG0145 157 AVSSLFSYRNPEHELRVAEIIREIGPDIPVSLSHEVSPEIGEYERANTAV--LNAYLSPILRRYLEAVKDALKERGIKAR 234 (674)
T ss_pred EEEEecccCCcHHHHHHHHHHHHhcCCceEEechhcchhcCcccchhhhe--eeeeehHHHHHHHHHHHHHHHhcCCCce
Confidence 6778887443 333445666666 6777765 2233333322111 12221 355666666666666666556
Q ss_pred EEEecChhHHHHHHHHHhCCC
Q 024681 89 AYVGHSVSAMIGLLASIRRPD 109 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~~p~ 109 (264)
..+--|-||.+....|...|-
T Consensus 235 l~~m~sdGgl~~~~~a~~~pv 255 (674)
T COG0145 235 LMVMQSDGGLVSAEEAREKPV 255 (674)
T ss_pred eEEEecCCccccHHHHhcCCe
Confidence 677788888888888777663
No 356
>PHA02114 hypothetical protein
Probab=29.65 E-value=55 Score=20.06 Aligned_cols=31 Identities=16% Similarity=0.459 Sum_probs=20.8
Q ss_pred eEEEecCCCCChhhHHHhhhhc--CCceEEEec
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL--NHHRVIMFD 49 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d 49 (264)
+||+=-.+..+...|-.++..| .||.|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 5555555666666777777777 777777643
No 357
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=29.60 E-value=2.6e+02 Score=21.45 Aligned_cols=48 Identities=19% Similarity=0.085 Sum_probs=23.4
Q ss_pred CCce--EEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHH
Q 024681 41 NHHR--VIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMI 99 (264)
Q Consensus 41 ~g~~--v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 99 (264)
.|+. =+.+| ||.|.+... .. --.+.+.+..+ +.+ .-.+++|+|-=..+
T Consensus 175 ~GI~~~~IilD-PGiGF~k~~---~~----n~~ll~~l~~l-~~l--g~Pilvg~SRKsfi 224 (282)
T PRK11613 175 AGIAKEKLLLD-PGFGFGKNL---SH----NYQLLARLAEF-HHF--NLPLLVGMSRKSMI 224 (282)
T ss_pred cCCChhhEEEe-CCCCcCCCH---HH----HHHHHHHHHHH-HhC--CCCEEEEecccHHH
Confidence 6775 66777 467655311 00 11223333332 223 45678888854443
No 358
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=28.84 E-value=38 Score=26.05 Aligned_cols=21 Identities=10% Similarity=0.259 Sum_probs=17.3
Q ss_pred eCCCCceEEEecCCCCChhhH
Q 024681 13 VGTGDRILVLAHGFGTDQSAW 33 (264)
Q Consensus 13 ~g~~~p~vv~~hG~~~~~~~~ 33 (264)
..+.+|.++=+||+.++...|
T Consensus 105 ~~p~KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTGKNY 125 (344)
T ss_pred CCCCCCeEEEecCCCCCchhH
Confidence 345778999999999998776
No 359
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=28.74 E-value=81 Score=18.09 Aligned_cols=10 Identities=40% Similarity=0.451 Sum_probs=6.7
Q ss_pred ceEEEecCCC
Q 024681 18 RILVLAHGFG 27 (264)
Q Consensus 18 p~vv~~hG~~ 27 (264)
|.++++||..
T Consensus 32 ~~~~lvhGga 41 (71)
T PF10686_consen 32 PDMVLVHGGA 41 (71)
T ss_pred CCEEEEECCC
Confidence 5567777755
No 360
>PRK07877 hypothetical protein; Provisional
Probab=28.49 E-value=1.6e+02 Score=26.15 Aligned_cols=39 Identities=28% Similarity=0.244 Sum_probs=29.3
Q ss_pred HHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 80 LDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 80 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+.+...+|.++|-+.|+.++..+|..- -+..+++++.-
T Consensus 102 Q~~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~D 140 (722)
T PRK07877 102 QERLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADFD 140 (722)
T ss_pred HHHHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcCC
Confidence 3455567999999999999998888642 13778888863
No 361
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.38 E-value=43 Score=25.81 Aligned_cols=17 Identities=18% Similarity=0.274 Sum_probs=14.9
Q ss_pred EEEecChhHHHHHHHHH
Q 024681 89 AYVGHSVSAMIGLLASI 105 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~ 105 (264)
.+.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 57899999999998874
No 362
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=28.10 E-value=2e+02 Score=19.74 Aligned_cols=37 Identities=19% Similarity=0.349 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhCC----CeEEEEecC--hhHHHHHHHHHh
Q 024681 70 DAYVDDLLNILDTLGV----NRCAYVGHS--VSAMIGLLASIR 106 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~----~~~~l~G~S--~Gg~~a~~~a~~ 106 (264)
.--+..+.+++++.+. +++.++|.| .|-.++..+..+
T Consensus 17 PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 17 PCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp -HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 3456666777777643 589999999 588888887765
No 363
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.32 E-value=56 Score=24.37 Aligned_cols=18 Identities=22% Similarity=0.296 Sum_probs=16.0
Q ss_pred EEEecChhHHHHHHHHHh
Q 024681 89 AYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~ 106 (264)
.+.|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 478999999999998875
No 364
>PLN03006 carbonate dehydratase
Probab=27.11 E-value=1.1e+02 Score=23.61 Aligned_cols=31 Identities=29% Similarity=0.249 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHHH
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLL 102 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 102 (264)
...-++-.+..++.+.|+++|||-=|.+...
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aa 188 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQAL 188 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHH
Confidence 4566777788899999999999987766543
No 365
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=26.90 E-value=1.2e+02 Score=21.47 Aligned_cols=33 Identities=24% Similarity=0.177 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHHHHH
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 104 (264)
....+.-.+..++.+.++++|||-=|.+...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 556677778889999999999998777665543
No 366
>PRK09004 FMN-binding protein MioC; Provisional
Probab=26.52 E-value=1.3e+02 Score=20.12 Aligned_cols=15 Identities=27% Similarity=0.395 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHhC
Q 024681 70 DAYVDDLLNILDTLG 84 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~ 84 (264)
...++.+.+.+..+|
T Consensus 99 c~~~~~ld~~l~~lG 113 (146)
T PRK09004 99 CGAIDKLEQLLKAKG 113 (146)
T ss_pred hHHHHHHHHHHHHcC
Confidence 333444444444443
No 367
>PRK06824 translation initiation factor Sui1; Validated
Probab=26.37 E-value=1.5e+02 Score=19.24 Aligned_cols=67 Identities=18% Similarity=0.194 Sum_probs=41.5
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCC
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGV 85 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (264)
++.+...|.+...|-++-|+.........++..| .. -|+|.+-.. ....---+..+.+.+++...+.
T Consensus 44 ri~~~~kgr~gK~VTvI~Gl~~~~~dlk~l~K~LKkk--------~gcGGtvkd----~~IeiQGD~r~~v~~~L~~~G~ 111 (118)
T PRK06824 44 RVRRETKGRGGKTVTVITGVPLAEDALKELAKELKRR--------CGTGGTLKD----GVIEIQGDHVELLLAELLKRGF 111 (118)
T ss_pred EEEEEEccCCCceEEEEeCCcCCHHHHHHHHHHHHHH--------hcCCceEec----CEEEEcCcHHHHHHHHHHHCCC
Confidence 4455556666669999999998888899999988 43 344544221 0110012345566677766664
No 368
>PF01751 Toprim: Toprim domain; InterPro: IPR006171 This is a conserved region from DNA primase. This corresponds to the Toprim (topoisomerase-primase) domain common to DnaG primases, topoisomerases, OLD family nucleases and RecR/M DNA repair proteins []. Both DnaG motifs IV and V are present in the alignment, the DxD (V) motif may be involved in Mg2+ binding and mutations to the conserved glutamate (IV) completely abolish DnaG type primase activity. DNA primase 2.7.7.6 from EC is a nucleotidyltransferase it synthesizes the oligoribonucleotide primers required for DNA replication on the lagging strand of the replication fork; it can also prime the leading stand and has been implicated in cell division []. This family also includes the atypical archaeal A subunit from type II DNA topoisomerases []. Type II DNA topoisomerases catalyse the relaxation of DNA supercoiling by causing transient double strand breaks.; PDB: 2ZJT_A 3IG0_A 3M4I_A 3NUH_B 1GKU_B 1GL9_C 3PWT_A 1CY4_A 1ECL_A 1CY7_A ....
Probab=26.23 E-value=1.6e+02 Score=17.95 Aligned_cols=33 Identities=30% Similarity=0.452 Sum_probs=24.1
Q ss_pred hhhHHHHHHHcCCCceEEEecCCCCcccccChhc
Q 024681 220 VSVAEYLQRHLGGRNTVELLKIEGHLPHLSAPAI 253 (264)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 253 (264)
+..+..+.+.+.. ....+++-.||.+....|+.
T Consensus 8 ps~a~~i~~~l~~-~~~~v~~~~Ghl~~~~~~~~ 40 (100)
T PF01751_consen 8 PSDAKAIAKALGG-EEYIVIATSGHLLELAKPED 40 (100)
T ss_dssp HHHHHHHHHHSST-TTEEEEEESSSSEESTTSSH
T ss_pred HHHHHHHHHHcCC-CCEEEEEeCCcccccccccc
Confidence 4567778888775 45677777899888877644
No 369
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=26.17 E-value=2.1e+02 Score=19.28 Aligned_cols=48 Identities=10% Similarity=0.073 Sum_probs=33.1
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCCCC
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
++...++..+++.+++.|.+.-..+...+...+....+-.++.+....
T Consensus 78 ~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~~a~~~g~~v~v~~Da~as 125 (157)
T cd01012 78 AFRKALKATGRKQVVLAGLETHVCVLQTALDLLEEGYEVFVVADACGS 125 (157)
T ss_pred HHHHHHHhcCCCEEEEEEeeccHHHHHHHHHHHHCCCEEEEEeeCCCC
Confidence 667778888999999999998876655443322234666676666533
No 370
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=26.08 E-value=2.5e+02 Score=21.35 Aligned_cols=53 Identities=13% Similarity=0.098 Sum_probs=32.6
Q ss_pred CCcccCEEEEecCCCCCcchhhHHHHHHHcCCCceEEEec-CCCC-cccccChhcHHHHHHH
Q 024681 201 GLVRVPCVIIQTSKDVSVPVSVAEYLQRHLGGRNTVELLK-IEGH-LPHLSAPAIVGPVIRR 260 (264)
Q Consensus 201 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH-~~~~~~~~~~~~~i~~ 260 (264)
....+||+++.|++ ...++..+.+|. ++.+.++ +-|+ ....-.|++..+.|.+
T Consensus 144 g~~gVPV~lVsGDd------~~~~ea~~~~P~-~~tv~vK~~~gr~aA~~~~p~~a~~~I~~ 198 (270)
T cd08769 144 GEFGVPVVLVAGDS------ELEKEVKEETPW-AVFVPTKESLSRYSAKSPSMKKVKEELRE 198 (270)
T ss_pred hhcCCCEEEEecCH------HHHHHHHHhCCC-ceEEEEeeecCCCccccCCHHHHHHHHHH
Confidence 34589999999875 234556667788 6666655 3454 3333445555555543
No 371
>PRK08105 flavodoxin; Provisional
Probab=26.07 E-value=1.3e+02 Score=20.28 Aligned_cols=19 Identities=11% Similarity=0.123 Sum_probs=10.8
Q ss_pred hHHHHHHHHHHHHHHhCCC
Q 024681 68 TLDAYVDDLLNILDTLGVN 86 (264)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~ 86 (264)
.+...++.+.+.++.+|.+
T Consensus 99 ~fc~~~~~ld~~l~~lGa~ 117 (149)
T PRK08105 99 NFCGAGKQFDALLQEQGAK 117 (149)
T ss_pred HHHHHHHHHHHHHHHCCCe
Confidence 3555566666666665543
No 372
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=26.06 E-value=52 Score=25.97 Aligned_cols=18 Identities=17% Similarity=0.276 Sum_probs=15.9
Q ss_pred EEEecChhHHHHHHHHHh
Q 024681 89 AYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~~ 106 (264)
.+.|.|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 578999999999999874
No 373
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=25.96 E-value=38 Score=27.95 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=25.4
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCCCccceeE
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRPDLFTKLI 115 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~v 115 (264)
+.=|=++.|.|+||.+|..++.+.-+.++.+.
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 44477899999999999999988766666654
No 374
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=25.94 E-value=1.1e+02 Score=24.50 Aligned_cols=19 Identities=21% Similarity=0.232 Sum_probs=16.5
Q ss_pred EEEEecChhHHHHHHHHHh
Q 024681 88 CAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 88 ~~l~G~S~Gg~~a~~~a~~ 106 (264)
-.++|-|.|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 3589999999999988875
No 375
>PRK13938 phosphoheptose isomerase; Provisional
Probab=25.79 E-value=2.5e+02 Score=20.05 Aligned_cols=24 Identities=17% Similarity=-0.040 Sum_probs=21.3
Q ss_pred CCeEEEEecChhHHHHHHHHHhCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
..+++++|.+-.|.+|..++.+..
T Consensus 45 g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 45 GARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHcC
Confidence 479999999999999999998764
No 376
>PRK09936 hypothetical protein; Provisional
Probab=25.78 E-value=1.9e+02 Score=22.28 Aligned_cols=30 Identities=13% Similarity=0.309 Sum_probs=26.2
Q ss_pred ChhhHHHhhhhc--CCceEEEecCCCCCCCCC
Q 024681 29 DQSAWQRILPYL--NHHRVIMFDLVCAGSVNP 58 (264)
Q Consensus 29 ~~~~~~~~~~~l--~g~~v~~~d~~g~G~s~~ 58 (264)
+...|+.+.+.+ .|++.+.+.+-++|+|+-
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~f 67 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADF 67 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCc
Confidence 457899999998 899999999999999843
No 377
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=25.77 E-value=96 Score=22.39 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHH
Q 024681 70 DAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASI 105 (264)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 105 (264)
......+.-.+..++.+.|+++||+-=|.+...+..
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 456677788888999999999999987777665543
No 378
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=25.43 E-value=31 Score=24.05 Aligned_cols=31 Identities=23% Similarity=0.079 Sum_probs=22.2
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+.++++.....-...+|-|||+..|+.++.-
T Consensus 87 l~~i~dwa~~~v~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 87 LTEILDWAKTHVTSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHcC
Confidence 5555555543446789999999999988754
No 379
>PRK15219 carbonic anhydrase; Provisional
Probab=25.35 E-value=75 Score=23.64 Aligned_cols=32 Identities=9% Similarity=0.106 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHHHH
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLA 103 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 103 (264)
....++-.+..++.+.++++|||-=|.+...+
T Consensus 129 ~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 129 LLGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred hhhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 44566777788899999999999877665544
No 380
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=24.95 E-value=3e+02 Score=20.66 Aligned_cols=36 Identities=25% Similarity=0.363 Sum_probs=24.3
Q ss_pred HHHHHHHHHh-CCCeEEEEecChhHHHHHHHHHhCCC
Q 024681 74 DDLLNILDTL-GVNRCAYVGHSVSAMIGLLASIRRPD 109 (264)
Q Consensus 74 ~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~ 109 (264)
+.+..+.+.+ +..+++++|..-.|.++...|...+.
T Consensus 37 ~av~~~~~~l~~ggrl~~~GaGtSg~la~~da~e~~~ 73 (257)
T cd05007 37 RAVDAAAERLRAGGRLIYVGAGTSGRLGVLDASELPP 73 (257)
T ss_pred HHHHHHHHHHHcCCEEEEEcCcHHHHHHHHHHHhccc
Confidence 3333334444 33689999999999999877766543
No 381
>PRK07053 glutamine amidotransferase; Provisional
Probab=24.94 E-value=2.9e+02 Score=20.41 Aligned_cols=31 Identities=13% Similarity=-0.004 Sum_probs=19.4
Q ss_pred HHHHHHHHHhCCCeEEEEecChhHHHHHHHH
Q 024681 74 DDLLNILDTLGVNRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 74 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 104 (264)
.++.++++..-...+-++|.|+|..+...+.
T Consensus 70 ~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 70 APEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 3444444443223456999999998776554
No 382
>PRK06490 glutamine amidotransferase; Provisional
Probab=24.91 E-value=2.9e+02 Score=20.46 Aligned_cols=33 Identities=6% Similarity=0.105 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEecChhHHHHHHH
Q 024681 71 AYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLA 103 (264)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 103 (264)
.+...+.++++..-..++-++|.|+|..+...+
T Consensus 70 ~wi~~~~~~i~~~~~~~~PvLGIC~G~Qlla~a 102 (239)
T PRK06490 70 DFIRREIDWISVPLKENKPFLGICLGAQMLARH 102 (239)
T ss_pred hHHHHHHHHHHHHHHCCCCEEEECHhHHHHHHH
Confidence 345555556654422456799999999876655
No 383
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP). Biotin-apoprotein ligase modifies proteins by covalently attaching biotin. ScBLP is known to biotinylate acety-CoA carboxylase and pyruvate carboxylase. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, the Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in a typical GATase1 domain is conserved.
Probab=24.75 E-value=92 Score=19.95 Aligned_cols=15 Identities=27% Similarity=0.459 Sum_probs=12.6
Q ss_pred CeEEEEecChhHHHH
Q 024681 86 NRCAYVGHSVSAMIG 100 (264)
Q Consensus 86 ~~~~l~G~S~Gg~~a 100 (264)
+.--++|.|+||+++
T Consensus 76 ~g~p~LGIClGAy~a 90 (114)
T cd03144 76 NGGNYLGICAGAYLA 90 (114)
T ss_pred CCCcEEEEecCccce
Confidence 446789999999998
No 384
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.24 E-value=64 Score=25.20 Aligned_cols=17 Identities=18% Similarity=0.169 Sum_probs=14.5
Q ss_pred EEEecChhHHHHHHHHH
Q 024681 89 AYVGHSVSAMIGLLASI 105 (264)
Q Consensus 89 ~l~G~S~Gg~~a~~~a~ 105 (264)
.+.|.|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 57899999999988764
No 385
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=23.84 E-value=1.7e+02 Score=21.17 Aligned_cols=25 Identities=8% Similarity=0.094 Sum_probs=13.9
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHH
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMI 99 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~ 99 (264)
.+...++..+.-..+++=||+||..
T Consensus 113 ~ir~~~e~~d~~~~~~i~~slgGGT 137 (216)
T PF00091_consen 113 QIRKEIEKCDSLDGFFIVHSLGGGT 137 (216)
T ss_dssp HHHHHHHTSTTESEEEEEEESSSSH
T ss_pred ccchhhccccccccceeccccccee
Confidence 3344443334446677777777653
No 386
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=23.72 E-value=2.9e+02 Score=20.70 Aligned_cols=55 Identities=13% Similarity=0.176 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHHhCCC----eEEE---EecChhHHHH-HHHHHhCCCccceeEEecCCCC
Q 024681 68 TLDAYVDDLLNILDTLGVN----RCAY---VGHSVSAMIG-LLASIRRPDLFTKLILIGASPR 122 (264)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~----~~~l---~G~S~Gg~~a-~~~a~~~p~~v~~~vl~~~~~~ 122 (264)
+-.++.+++..++...+.+ +.++ .|+++-|..| ..++.-.|..++++.+++|...
T Consensus 18 ~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSHH 80 (296)
T KOG3086|consen 18 SGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSHH 80 (296)
T ss_pred CHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCcce
Confidence 4778889999999887543 4444 4888877655 5566677889999999999644
No 387
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=23.54 E-value=1.3e+02 Score=23.72 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=23.8
Q ss_pred eEEEEecChhHHHHHHHHHhCCCccceeEEecCCC
Q 024681 87 RCAYVGHSVSAMIGLLASIRRPDLFTKLILIGASP 121 (264)
Q Consensus 87 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 121 (264)
+++++|-++||..+..-+.+....-..+++++...
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~~ 35 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSS 35 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCCC
Confidence 47899999999877666543322235688887643
No 388
>cd01015 CSHase N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.
Probab=23.31 E-value=2.4e+02 Score=19.55 Aligned_cols=47 Identities=21% Similarity=0.176 Sum_probs=31.9
Q ss_pred HHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 74 DDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 74 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.++..+++..+++.++|+|-+.-..+-..+........+-.++.+..
T Consensus 103 t~L~~~L~~~gi~~vvi~G~~t~~CV~~Ta~~A~~~Gy~v~vv~Da~ 149 (179)
T cd01015 103 TSLAATLTARGVDTLIVAGCSTSGCIRATAVDAMQHGFRPIVVRECV 149 (179)
T ss_pred CcHHHHHHHcCCCEEEEeeecccHhHHHHHHHHHHCCCeEEEeeccc
Confidence 47788889999999999999987766433332222235556666654
No 389
>PRK10437 carbonic anhydrase; Provisional
Probab=23.26 E-value=1.8e+02 Score=21.32 Aligned_cols=32 Identities=16% Similarity=0.140 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHHHH
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLA 103 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 103 (264)
...-+...+..++.+.++++||+-=|.+...+
T Consensus 77 ~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal 108 (220)
T PRK10437 77 CLSVVQYAVDVLEVEHIIICGHYGCGGVQAAV 108 (220)
T ss_pred hHHHHHHHHHHcCCCEEEEeCCCCchHHHHHH
Confidence 34556667778899999999999877766544
No 390
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=23.19 E-value=3.6e+02 Score=20.95 Aligned_cols=96 Identities=17% Similarity=0.123 Sum_probs=48.9
Q ss_pred eEEEecCCCCChhhHHHhhhhc-CCceEEEecCCCC---------------CCCCCC-CCCCccc-----chHHHHHHHH
Q 024681 19 ILVLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCA---------------GSVNPD-YFDFRRY-----TTLDAYVDDL 76 (264)
Q Consensus 19 ~vv~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~---------------G~s~~~-~~~~~~~-----~~~~~~~~~~ 76 (264)
.+|.--|.+++..--....+.- .+.+++++|--|. |.+-.+ ..+..-+ -+-++-.+-.
T Consensus 172 ~fVagvGTGGTitGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V~d~~A~~~~ 251 (300)
T COG0031 172 AFVAGVGTGGTITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRVSDEEAIATA 251 (300)
T ss_pred EEEEeCCcchhHHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEECHHHHHHHH
Confidence 4555556666554444444444 6688999887642 222111 1111001 0223333334
Q ss_pred HHHHHHhCCCeEEEEecChhHHHH--HHHHHhCCCccceeEEecC
Q 024681 77 LNILDTLGVNRCAYVGHSVSAMIG--LLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 77 ~~~~~~~~~~~~~l~G~S~Gg~~a--~~~a~~~p~~v~~~vl~~~ 119 (264)
..+.+.. =.++|-|.|+.++ +.+|.+.+. =+.+|.+-|
T Consensus 252 r~La~~e----GilvG~SsGA~~~aa~~~a~~~~~-g~~IVti~p 291 (300)
T COG0031 252 RRLAREE----GLLVGISSGAALAAALKLAKELPA-GKTIVTILP 291 (300)
T ss_pred HHHHHHh----CeeecccHHHHHHHHHHHHHhcCC-CCeEEEEEC
Confidence 4444444 4899999999775 556666653 233444433
No 391
>TIGR00090 iojap_ybeB iojap-like ribosome-associated protein. This model describes a widely distributed family of bacterial proteins related to iojap from plants. It includes YbeB from E. coli. The gene iojap is a pattern-striping gene in maize, reflecting a chloroplast development defect in some cells. More recent work in bacteria suggests that the bacterial iojap-related protein physically associates with ribosomes. The function remains unknown.
Probab=23.04 E-value=68 Score=19.83 Aligned_cols=57 Identities=14% Similarity=0.194 Sum_probs=31.9
Q ss_pred hhhhc---CCceEEEecCCCCCCCCCCCC----CCcccchHHHHHHHHHHHHHHhCCCeEEEEecC
Q 024681 36 ILPYL---NHHRVIMFDLVCAGSVNPDYF----DFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHS 94 (264)
Q Consensus 36 ~~~~l---~g~~v~~~d~~g~G~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 94 (264)
++..| ++-.+.++|.++.- ....+ ....-.....+++.+...++..+..+..+-|..
T Consensus 5 i~~~l~~kka~dI~vldv~~~~--~~~dy~VI~Tg~S~rh~~aia~~v~~~~k~~~~~~~~~EG~~ 68 (99)
T TIGR00090 5 IVEALDDKKAEDIVVLDVRGKS--SIADYFVIASGTSSRHVKAIADNVEEELKEAGLKPLGVEGLE 68 (99)
T ss_pred HHHHHHHcCCCCEEEEECCCCC--cccCEEEEEEeCCHHHHHHHHHHHHHHHHHcCCCcccccCCC
Confidence 34455 77889999998642 11000 000011366777788777777766555555543
No 392
>COG0860 AmiC N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=23.00 E-value=3.2e+02 Score=20.21 Aligned_cols=40 Identities=18% Similarity=0.230 Sum_probs=24.5
Q ss_pred ceEEEecCCCCCCCCCCCCCCc----ccchHHHHHHHHHHHHHHhC
Q 024681 43 HRVIMFDLVCAGSVNPDYFDFR----RYTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 43 ~~v~~~d~~g~G~s~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 84 (264)
-.+|.+| ||||..++...... .-- .-+.+.-+...++..+
T Consensus 42 ~~~I~ID-pGHGG~D~GAig~~g~~EKdv-tL~ia~~l~~~L~~~g 85 (231)
T COG0860 42 GKTIVID-PGHGGKDPGAIGPNGTLEKDV-TLDIAKRLRDLLRAEG 85 (231)
T ss_pred CeEEEEc-CCCCCCCCCccCCCCCcccee-HHHHHHHHHHHHHhCC
Confidence 4677888 89999865322211 111 3456667777777766
No 393
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=22.93 E-value=1e+02 Score=21.33 Aligned_cols=73 Identities=21% Similarity=0.148 Sum_probs=41.0
Q ss_pred EEecCCCCChhhHHHhhhhc-CCceEEEecCCCCCCCCC-CC--CCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChh
Q 024681 21 VLAHGFGTDQSAWQRILPYL-NHHRVIMFDLVCAGSVNP-DY--FDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVS 96 (264)
Q Consensus 21 v~~hG~~~~~~~~~~~~~~l-~g~~v~~~d~~g~G~s~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 96 (264)
|++-|.|++...-+.++..| ..|.--.+-+|.--.|.. .. --..+|. .+.. ...-++.++..-=+|+|.|--
T Consensus 44 vl~cGNGgSaadAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~-yd~v---FsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYG-YDEV---FSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhcccc-HHHH---HHHHHHhcCCCCCEEEEEeCC
Confidence 66778888888888888888 666655555544433311 00 0012232 2222 123345556556678888877
Q ss_pred H
Q 024681 97 A 97 (264)
Q Consensus 97 g 97 (264)
|
T Consensus 120 G 120 (176)
T COG0279 120 G 120 (176)
T ss_pred C
Confidence 7
No 394
>PLN02154 carbonic anhydrase
Probab=22.88 E-value=1.7e+02 Score=22.52 Aligned_cols=32 Identities=28% Similarity=0.212 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHHHH
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLA 103 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 103 (264)
....++-.+..++.+.++++|||-=|.+...+
T Consensus 152 ~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 152 TNSALEFAVTTLQVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred hhhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 45567777888999999999999766665544
No 395
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=22.71 E-value=3.7e+02 Score=20.83 Aligned_cols=24 Identities=29% Similarity=0.523 Sum_probs=18.9
Q ss_pred CCeEEEEecChhHHHHHHHHHhCC
Q 024681 85 VNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 85 ~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
..+++++|....|.++...|...+
T Consensus 62 ggrI~~~GaGtSg~la~~da~e~~ 85 (299)
T PRK05441 62 GGRLIYIGAGTSGRLGVLDASECP 85 (299)
T ss_pred CCEEEEEcCcHHHHHHHHHHHhCc
Confidence 368999999999999966666544
No 396
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=22.51 E-value=83 Score=24.29 Aligned_cols=31 Identities=19% Similarity=0.014 Sum_probs=20.8
Q ss_pred HHHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 76 LLNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 76 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
+.++++.+.....-++|-|||+.+++.+..-
T Consensus 124 l~~i~~w~~~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 124 LKEILDWAKTHVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHcCCCEEEEcHHHHHHHHHcCC
Confidence 4444444433357899999999998876543
No 397
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=22.51 E-value=4.5e+02 Score=21.74 Aligned_cols=54 Identities=13% Similarity=0.195 Sum_probs=27.5
Q ss_pred CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHh
Q 024681 41 NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIR 106 (264)
Q Consensus 41 ~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 106 (264)
.+|.++.+|.+|....+ +...+.+..+.+.+....+++|--++-|.-+...|..
T Consensus 181 ~~~DvVIIDTaGr~~~d------------~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~ 234 (428)
T TIGR00959 181 NGFDVVIVDTAGRLQID------------EELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKT 234 (428)
T ss_pred cCCCEEEEeCCCccccC------------HHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHH
Confidence 67888888888764321 1233333444444444455555444444444444433
No 398
>PLN00416 carbonate dehydratase
Probab=22.40 E-value=1.7e+02 Score=22.01 Aligned_cols=33 Identities=24% Similarity=0.138 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHHHHH
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGLLAS 104 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 104 (264)
....++-.+..++.+.|+++|||-=|.+...+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 455677778889999999999998776655443
No 399
>cd00431 cysteine_hydrolases Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.
Probab=22.37 E-value=2.1e+02 Score=19.19 Aligned_cols=46 Identities=15% Similarity=0.124 Sum_probs=30.4
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccceeEEecCC
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTKLILIGAS 120 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 120 (264)
.+.++++..+.++++|+|-+.-..+...+........+-.|+-+..
T Consensus 100 ~l~~~L~~~~i~~vil~G~~t~~CV~~T~~~a~~~G~~v~vi~Da~ 145 (161)
T cd00431 100 DLDELLRERGIDTLVVCGIATDICVLATARDALDLGYRVIVVEDAC 145 (161)
T ss_pred CHHHHHHHCCCCEEEEEecCcChhHHHHHHHHHHCCCEEEEehhhc
Confidence 6777888889999999999988876554433222234445555543
No 400
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=22.27 E-value=3.9e+02 Score=20.94 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=42.4
Q ss_pred HHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh---CCCeEEEEecChhHHHHHHHHHhCC
Q 024681 33 WQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL---GVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 33 ~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+..+...+ ++|.++.+|-+|....... .-+....+..+++.. ....++++-.+.-|.-++.-+..+-
T Consensus 186 ~~~l~~~~~~~~D~ViIDTaGr~~~~~~---------l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~ 256 (318)
T PRK10416 186 FDAIQAAKARGIDVLIIDTAGRLHNKTN---------LMEELKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFH 256 (318)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcCCHH---------HHHHHHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHH
Confidence 44555556 8999999999987544321 222233334444322 2345667776666666655555432
Q ss_pred C--ccceeEEe
Q 024681 109 D--LFTKLILI 117 (264)
Q Consensus 109 ~--~v~~~vl~ 117 (264)
+ .+.++|+-
T Consensus 257 ~~~~~~giIlT 267 (318)
T PRK10416 257 EAVGLTGIILT 267 (318)
T ss_pred hhCCCCEEEEE
Confidence 2 35566654
No 401
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=22.19 E-value=78 Score=29.90 Aligned_cols=25 Identities=32% Similarity=0.541 Sum_probs=20.1
Q ss_pred HHHHHHHHHhCCCeEEEEecChhHH
Q 024681 74 DDLLNILDTLGVNRCAYVGHSVSAM 98 (264)
Q Consensus 74 ~~~~~~~~~~~~~~~~l~G~S~Gg~ 98 (264)
-.+.+++..+++.|-.++|||.|-.
T Consensus 570 iaLtDlLs~lgi~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 570 IALTDLLSCLGIRPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHHhcCCCCCcccccccchh
Confidence 3456777888999999999999843
No 402
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=22.16 E-value=1.6e+02 Score=24.68 Aligned_cols=37 Identities=11% Similarity=0.207 Sum_probs=29.9
Q ss_pred CCceEEEecCCCCCh--hhHHHhhhhc--CCceEEEecCCC
Q 024681 16 GDRILVLAHGFGTDQ--SAWQRILPYL--NHHRVIMFDLVC 52 (264)
Q Consensus 16 ~~p~vv~~hG~~~~~--~~~~~~~~~l--~g~~v~~~d~~g 52 (264)
+.|+||++-|+-+++ ..-..+...| +|++|.++..|.
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 457999999977765 4567888888 999999988763
No 403
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=22.01 E-value=3.9e+02 Score=20.81 Aligned_cols=25 Identities=16% Similarity=0.081 Sum_probs=21.3
Q ss_pred CCCeEEEEecChhHHHHHHHHHhCC
Q 024681 84 GVNRCAYVGHSVSAMIGLLASIRRP 108 (264)
Q Consensus 84 ~~~~~~l~G~S~Gg~~a~~~a~~~p 108 (264)
+.++|.++|-|.|=.+|.+.++.+.
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC
Confidence 4568999999999999988887765
No 404
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=22.00 E-value=2.3e+02 Score=23.44 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=21.8
Q ss_pred eEEEecCCCCCCCCCCCCCCcccc---hHHHHHHHHHHHHHHh
Q 024681 44 RVIMFDLVCAGSVNPDYFDFRRYT---TLDAYVDDLLNILDTL 83 (264)
Q Consensus 44 ~v~~~d~~g~G~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 83 (264)
-+|++| ||||..++......... -.-+++..+.+.++..
T Consensus 192 ~vIvID-pGHGG~DpGA~g~~G~~EKdv~L~iA~~L~~~L~~~ 233 (445)
T PRK10431 192 VIIAID-AGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDD 233 (445)
T ss_pred eEEEEe-CCCCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHhC
Confidence 378888 89999876432221111 1224555566666654
No 405
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=21.89 E-value=1.5e+02 Score=16.64 Aligned_cols=34 Identities=12% Similarity=-0.027 Sum_probs=23.5
Q ss_pred HHcCCCceEEEecCCCCcccccChhcHHHHHHHHhc
Q 024681 228 RHLGGRNTVELLKIEGHLPHLSAPAIVGPVIRRALS 263 (264)
Q Consensus 228 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 263 (264)
+.+|. .+...+. +--+...|.-+++.+.|.+|-+
T Consensus 23 e~~PD-ttItLin-GkkyvVkEsveEVi~kI~~y~r 56 (67)
T COG1582 23 EAFPD-TTITLIN-GKKYVVKESVEEVINKIIEYRR 56 (67)
T ss_pred hccCC-cEEEEEc-CcEEEEcccHHHHHHHHHHHHH
Confidence 45676 5555554 5667777788888888888754
No 406
>PF14252 DUF4347: Domain of unknown function (DUF4347)
Probab=21.60 E-value=1.9e+02 Score=20.03 Aligned_cols=49 Identities=14% Similarity=0.262 Sum_probs=29.6
Q ss_pred hhHHHhhhhc-CCceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHh-CCCeEEEEecChhH
Q 024681 31 SAWQRILPYL-NHHRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTL-GVNRCAYVGHSVSA 97 (264)
Q Consensus 31 ~~~~~~~~~l-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg 97 (264)
..++.+...+ .+..|+.+|.- .+-.+++.+.++.. +++.+++++|.--|
T Consensus 10 ~d~~~L~~~l~~~~~v~~ld~~------------------~d~~~qI~~~L~~~~~i~~lhivsHG~~G 60 (165)
T PF14252_consen 10 EDYESLLAGLPPGVEVVILDPS------------------RDGLEQIAQALAGYQNIDALHIVSHGSPG 60 (165)
T ss_pred CCHHHHHhcCcCCCEEEEEeCC------------------CchHHHHHHHHhcCCCCceEEEEcCCCcc
Confidence 4567777777 88888888831 11133333333333 46788888886444
No 407
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=21.48 E-value=2.8e+02 Score=19.12 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=21.5
Q ss_pred HHHHHHHh-CCCeEEEEecChhHHHHHHHHHhC
Q 024681 76 LLNILDTL-GVNRCAYVGHSVSAMIGLLASIRR 107 (264)
Q Consensus 76 ~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 107 (264)
+.++++.+ ..++++++|....+.+|..++.+.
T Consensus 20 ~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l 52 (179)
T TIGR03127 20 LDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRL 52 (179)
T ss_pred HHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHH
Confidence 33333333 347899999988888887777654
No 408
>smart00500 SFM Splicing Factor Motif, present in Prp18 and Pr04.
Probab=21.34 E-value=1.3e+02 Score=15.41 Aligned_cols=24 Identities=17% Similarity=0.275 Sum_probs=16.8
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHH
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMI 99 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~ 99 (264)
++..-+..++ +|+.++|-+-..-.
T Consensus 5 eV~~~LR~lg-ePi~lFGE~~~~Rr 28 (44)
T smart00500 5 EVIRRLRELG-EPITLFGEDDQERR 28 (44)
T ss_pred HHHHHHHHcC-CCeeecCCChHHHH
Confidence 4555566666 79999998876543
No 409
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=21.30 E-value=65 Score=24.10 Aligned_cols=82 Identities=13% Similarity=0.059 Sum_probs=41.5
Q ss_pred EEEecCCCCChhhHHHhh-hhc--C-------CceEEEecCCCCCCCCCCCCCC--cc---cchHHHHHHHHHHHHHHhC
Q 024681 20 LVLAHGFGTDQSAWQRIL-PYL--N-------HHRVIMFDLVCAGSVNPDYFDF--RR---YTTLDAYVDDLLNILDTLG 84 (264)
Q Consensus 20 vv~~hG~~~~~~~~~~~~-~~l--~-------g~~v~~~d~~g~G~s~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~ 84 (264)
-|++.|.|...---..++ ..+ + .-+++.+|..|-=..+.....+ .. |..-.....++.++++..
T Consensus 27 riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~~L~eav~~~- 105 (254)
T cd00762 27 KVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESGDLEDAVEAA- 105 (254)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccCCHHHHHHhh-
Confidence 356667665543333322 222 2 2378999998852222211111 00 110111123566666655
Q ss_pred CCeEEEEecCh-hHHHHHHH
Q 024681 85 VNRCAYVGHSV-SAMIGLLA 103 (264)
Q Consensus 85 ~~~~~l~G~S~-Gg~~a~~~ 103 (264)
++-+|+|-|- ||.+.-.+
T Consensus 106 -kptvlIG~S~~~g~ft~ev 124 (254)
T cd00762 106 -KPDFLIGVSRVGGAFTPEV 124 (254)
T ss_pred -CCCEEEEeCCCCCCCCHHH
Confidence 4779999998 88665443
No 410
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=20.71 E-value=2.3e+02 Score=23.05 Aligned_cols=40 Identities=23% Similarity=0.284 Sum_probs=35.0
Q ss_pred CceEEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCC
Q 024681 17 DRILVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSV 56 (264)
Q Consensus 17 ~p~vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s 56 (264)
+.+.|-+-=||.+..+-....+.| .||.|++|---|.|..
T Consensus 184 ~kp~I~iTmfGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 184 DKPLIGITMFGVTTPCVDAIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHHhcCCeEEEEcCCCCchH
Confidence 347888888999999899999999 8999999999999855
No 411
>TIGR01158 SUI1_rel translation initation factor SUI1, putative, prokaryotic. This family of archaeal and bacterial proteins is homologous to the eukaryotic translation intiation factor SUI1 involved in directing the ribosome to the proper start site of translation by functioning in concert with eIF-2 and the initiator tRNA-Met.
Probab=20.65 E-value=2.1e+02 Score=17.89 Aligned_cols=34 Identities=9% Similarity=0.177 Sum_probs=25.5
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL 40 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l 40 (264)
.++....|.+...|-.+.|+.........++..|
T Consensus 27 ~i~~e~rgr~gK~VTvV~Gl~~~~~~l~~l~k~L 60 (101)
T TIGR01158 27 RIQRETRGRKGKGVTIIEGLDLSDIDLKELAKEL 60 (101)
T ss_pred EEEEEEecCCCCEEEEEeCCcCchhhHHHHHHHH
Confidence 4555556565568999999988877778888877
No 412
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=20.61 E-value=2.3e+02 Score=19.43 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEec-ChhHHHHHHHHHhCC
Q 024681 69 LDAYVDDLLNILDTLGVNRCAYVGH-SVSAMIGLLASIRRP 108 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~G~-S~Gg~~a~~~a~~~p 108 (264)
.+.+++.+.++++..+ ..++|+|+ +.|..++-++|.+..
T Consensus 68 ~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~L~ 107 (168)
T cd01715 68 AEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAKLD 107 (168)
T ss_pred hHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHHhC
Confidence 7788888888888876 46666665 566678888887653
No 413
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=20.56 E-value=1.8e+02 Score=22.06 Aligned_cols=41 Identities=20% Similarity=0.239 Sum_probs=23.7
Q ss_pred HHHHHHHHHhCC---CeEEEEecChhHHHHHHHHHhCCCccceeE
Q 024681 74 DDLLNILDTLGV---NRCAYVGHSVSAMIGLLASIRRPDLFTKLI 115 (264)
Q Consensus 74 ~~~~~~~~~~~~---~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~v 115 (264)
.-+..+++.+++ .+|.=+|..+||.. ..+|.++.-+|.++.
T Consensus 49 ~k~~~~~~~~~l~~G~~vLDiGcGwG~~~-~~~a~~~g~~v~git 92 (273)
T PF02353_consen 49 RKLDLLCEKLGLKPGDRVLDIGCGWGGLA-IYAAERYGCHVTGIT 92 (273)
T ss_dssp HHHHHHHTTTT--TT-EEEEES-TTSHHH-HHHHHHH--EEEEEE
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCCccHHH-HHHHHHcCcEEEEEE
Confidence 345566777765 47888999998875 456666544444444
No 414
>PHA00490 terminal protein
Probab=20.49 E-value=1.7e+02 Score=20.93 Aligned_cols=38 Identities=21% Similarity=0.188 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCCccce
Q 024681 75 DLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPDLFTK 113 (264)
Q Consensus 75 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~ 113 (264)
-+.+.++..+..+++--|.|.| .+....+...|..|.+
T Consensus 104 vvde~~~~~~Dke~isGGk~qG-Tvgqr~~llsp~~vtG 141 (266)
T PHA00490 104 VVDEILDRFNDKEVISGGKSQG-TVGQRKELLSPPDVTG 141 (266)
T ss_pred HHHHHHHHhcCcceeeCCCCCC-cHhhhhhhcCCcccCC
Confidence 3455666777778888899999 7788877777765554
No 415
>PRK09019 translation initiation factor Sui1; Validated
Probab=20.34 E-value=2.1e+02 Score=18.23 Aligned_cols=34 Identities=15% Similarity=0.305 Sum_probs=26.0
Q ss_pred eeEEEEeCCCCceEEEecCCCCChhhHHHhhhhc
Q 024681 7 ALHVRVVGTGDRILVLAHGFGTDQSAWQRILPYL 40 (264)
Q Consensus 7 ~~~~~~~g~~~p~vv~~hG~~~~~~~~~~~~~~l 40 (264)
++.....|.....|-+|-|+.........++..|
T Consensus 34 ri~~~r~gRkGK~VTiI~Gl~~~~~dlk~l~K~l 67 (108)
T PRK09019 34 RIQRQTSGRKGKGVCLITGLDLDDAELKKLAAEL 67 (108)
T ss_pred EEEEecCCCCCCeEEEEeCCcCCHHHHHHHHHHH
Confidence 4444455554459999999998888888888888
No 416
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=20.32 E-value=3e+02 Score=18.82 Aligned_cols=44 Identities=14% Similarity=0.092 Sum_probs=23.7
Q ss_pred ceEEEecCCCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhCCCeEEEEecChhHHH
Q 024681 43 HRVIMFDLVCAGSVNPDYFDFRRYTTLDAYVDDLLNILDTLGVNRCAYVGHSVSAMI 99 (264)
Q Consensus 43 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 99 (264)
-.+++.|-+|--.| -.++++.+....+. +.+-+.++|-+.|=.-
T Consensus 66 ~~~i~LDe~Gk~~s------------S~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~ 109 (153)
T TIGR00246 66 AHVVTLDIPGKPWT------------TPQLADTLEKWKTD-GRDVTLLIGGPEGLSP 109 (153)
T ss_pred CeEEEEcCCCCcCC------------HHHHHHHHHHHhcc-CCeEEEEEcCCCcCCH
Confidence 35677776654222 45566665554332 2234567777766443
No 417
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=20.25 E-value=3.1e+02 Score=19.02 Aligned_cols=38 Identities=11% Similarity=0.068 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEec-ChhHHHHHHHHHhC
Q 024681 69 LDAYVDDLLNILDTLGVNRCAYVGH-SVSAMIGLLASIRR 107 (264)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~G~-S~Gg~~a~~~a~~~ 107 (264)
.+.+++-+.++++..+ -.++|+|+ +.|+.++-++|.+.
T Consensus 76 ~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~L 114 (181)
T cd01985 76 PEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAALL 114 (181)
T ss_pred hHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHHh
Confidence 7788888888888876 45666664 55667887777764
No 418
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=20.18 E-value=2.8e+02 Score=20.77 Aligned_cols=46 Identities=24% Similarity=0.183 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCeEEEEecChhHH---HHHHHHHhCCCccceeEEecC
Q 024681 73 VDDLLNILDTLGVNRCAYVGHSVSAM---IGLLASIRRPDLFTKLILIGA 119 (264)
Q Consensus 73 ~~~~~~~~~~~~~~~~~l~G~S~Gg~---~a~~~a~~~p~~v~~~vl~~~ 119 (264)
.+++.+.++..++++.+++.-|..+. ..+..+. .++++.+++.+++
T Consensus 30 ~e~l~~~m~~~gV~~aV~vq~~~~~~~n~~~~~~~~-~~~r~~g~~~~~p 78 (263)
T cd01311 30 IDDLRALRSTLGIDRVVIVQASIYGADNSNLLDALA-SNGKARGGATVDP 78 (263)
T ss_pred HHHHHHHHHHhCCCcEEEeCccccCCchHHHHHHHh-hCCCeEEEEEECC
Confidence 56667777788999999887654222 1222233 4578888888764
No 419
>KOG2730 consensus Methylase [General function prediction only]
Probab=20.01 E-value=2.1e+02 Score=21.09 Aligned_cols=42 Identities=7% Similarity=-0.053 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHHHHhCCCeEEEEecChhHHHHHHHHHhCCC
Q 024681 68 TLDAYVDDLLNILDTLGVNRCAYVGHSVSAMIGLLASIRRPD 109 (264)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 109 (264)
+.+..+..+...+......++++...+-||.=+..+|.+.|.
T Consensus 77 Tpe~ia~~iA~~v~~~~~~~~iidaf~g~gGntiqfa~~~~~ 118 (263)
T KOG2730|consen 77 TPEKIAEHIANRVVACMNAEVIVDAFCGVGGNTIQFALQGPY 118 (263)
T ss_pred ccHHHHHHHHHHHHHhcCcchhhhhhhcCCchHHHHHHhCCe
Confidence 366677776655555545677777777777777888888773
No 420
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.01 E-value=2.3e+02 Score=19.37 Aligned_cols=30 Identities=20% Similarity=0.341 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEecChhHHHHH
Q 024681 72 YVDDLLNILDTLGVNRCAYVGHSVSAMIGL 101 (264)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 101 (264)
....+.-.+..++.+.++++|||-=|.+..
T Consensus 78 ~~~sl~yav~~l~v~~IvV~GHt~CG~~~a 107 (154)
T cd03378 78 VLGSLEYAVEVLGVPLVVVLGHESCGAVAA 107 (154)
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCCccHHHH
Confidence 455566777888999999999999555443
No 421
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=20.01 E-value=2e+02 Score=23.01 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=25.7
Q ss_pred EEEecCCCCChhhHHHhhhhc--CCceEEEecCCCCCCC
Q 024681 20 LVLAHGFGTDQSAWQRILPYL--NHHRVIMFDLVCAGSV 56 (264)
Q Consensus 20 vv~~hG~~~~~~~~~~~~~~l--~g~~v~~~d~~g~G~s 56 (264)
|+|+|...- ..|+.+++.| +|+.|..+-..+.+..
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 788887433 3378899999 8999988777666543
Done!