BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024682
(264 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 154 bits (388), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 136/250 (54%), Gaps = 47/250 (18%)
Query: 22 SASSYVLNGKIMFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLS 81
++S Y LNGKIM SVI+LFV V +++CFHSYA WL R +
Sbjct: 18 TSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWL-----------FRRHNRRIRRRIR 66
Query: 82 SGANTMNTAPPHAHQALDLSILKRIPAFVYS-PNIEDPKEPLDCAVCLSEFEDNENGRVL 140
S T++ +P QALD ++L +IP FVYS N P+E +C+VCLSEFE+ + GR+L
Sbjct: 67 SHLRTLSASP--RDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLL 124
Query: 141 PKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEV------VSVIEPTER 194
PKC H FHVDCID WF+S S CPLCRAPVQ P QV E + PTE
Sbjct: 125 PKCGHSFHVDCIDTWFRSRSTCPLCRAPVQ-------PPFQVIETGSSSSSSPLTFPTE- 176
Query: 195 DLGVVHQMGCSSSSSSSSSLPQLESVSVEIPRARENFRGLDDMGLSLTNERNGFKSPGNR 254
GC L + V+I R E F G + GL + NG K PG+R
Sbjct: 177 --------GCEREPI------DLAGIIVDISREVE-FEG-SNPGLPI---ENGSKFPGSR 217
Query: 255 VLTLKRIWSI 264
VL+LKR+WSI
Sbjct: 218 VLSLKRLWSI 227
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 109/177 (61%), Gaps = 11/177 (6%)
Query: 20 NPSASSYVLNGKIMFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFF 79
N +S Y LNGKIM SVI+LFV V +++CFHSYA WL R + R R AH
Sbjct: 16 NHGSSRYSLNGKIMLASVIILFVAVILILCFHSYARWL---FRRQNRRIRRRISAH---L 69
Query: 80 LSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNI-EDPKEPLDCAVCLSEFEDNENGR 138
S A T + LD ++L++IP FVYS E P E +C+VCLSEFE+++ GR
Sbjct: 70 RSLAAARDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLE--ECSVCLSEFEEDDEGR 127
Query: 139 VLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQ--LDITLVHPLVQVEEVVSVIEPTE 193
VLPKC HVFHVDCID WF+S S+CPLCRAPVQ +T P+ V V IE TE
Sbjct: 128 VLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTE 184
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 137/257 (53%), Gaps = 28/257 (10%)
Query: 23 ASSYVLNGKIMFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSS 82
+ +Y ++GKIM ++++LF VV ++V H YA W R R R+ R R + F ++
Sbjct: 21 SKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTA 80
Query: 83 GANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPK 142
+T T+ A + LD +++K +P F +S E K+P++CAVCLSEFE++E GRVLP
Sbjct: 81 DPSTAATSV-VASRGLDPNVIKSLPVFTFSD--ETHKDPIECAVCLSEFEESETGRVLPN 137
Query: 143 CRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVS--------------- 187
C+H FHVDCIDMWF SHS CPLCR +LV L +E +
Sbjct: 138 CQHTFHVDCIDMWFHSHSTCPLCR-------SLVESLAGIESTAAAREREVVIAVDSDPV 190
Query: 188 -VIEPTERDLGVVHQMGCSSSSSSSSSLPQLESVSVEIPRARENFRGLDDMGLSLTNERN 246
VIEP+ G+ + S SS + ++E+PR R D++ +
Sbjct: 191 LVIEPSSSS-GLTDEPHGSGSSQMLREDSGRKPAAIEVPR-RTFSEFEDELTRRDSPASQ 248
Query: 247 GFKSPGNRVLTLKRIWS 263
F+SP +R+L+ R+ S
Sbjct: 249 SFRSPMSRMLSFTRMLS 265
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 11/177 (6%)
Query: 78 FFLSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENG 137
F ++ A+T T P L+ SI+K +P F +S ++C+VCLSEF+DNE+G
Sbjct: 32 FNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVTA--LFAMECSVCLSEFKDNESG 89
Query: 138 RVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERDLG 197
RV+P C+H FHV CIDMWF SHS+CPLCR+ ++ V + E +S+ +P D
Sbjct: 90 RVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAGGVKSSMD-EVAISISDPVYGDTN 148
Query: 198 VVHQMGCSSSSSSSSSLPQLESVSVEIPRARENFRGLDDMGLSLTNERNGFKSPGNR 254
H G ++ S Q + ++EI + R L ++ L+ + F+SP +
Sbjct: 149 --HHEGTETTGDSVPEDSQRKPAAIEISQ-----RNLGEIENDLSRS-HSFRSPTDE 197
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 77/152 (50%), Gaps = 20/152 (13%)
Query: 30 GKIMFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYR------------HRHRRAHRL 77
GK++ S++ +F + L+ H YA +R + R+ R R
Sbjct: 22 GKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRRRF 81
Query: 78 FFLSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENG 137
F S + ++ A LD IL+ I V+ D K+ L+CAVCLS+ D +
Sbjct: 82 VFAQSQEDPLHNA------GLDSKILQSIHVVVFK--CTDFKDGLECAVCLSDLVDGDKA 133
Query: 138 RVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPV 169
RVLP+C H FHVDCIDMWFQSHS CPLCR V
Sbjct: 134 RVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 19/169 (11%)
Query: 21 PSASSYVLNGKIMFCSVILLFVVVFILVCFHSYA--SWLRYRHRHRYRYRHRHRRAHRLF 78
P SS N I+ +VI + F+LV ++ + L + +R R R
Sbjct: 32 PRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRR-------- 83
Query: 79 FLSSGANTMNTAPPH-AHQALDLSILKRIPAF------VYSPNIEDPKEPLDCAVCLSEF 131
SS N + PH ++ LD S ++ IP F V + + K +C+VCL+EF
Sbjct: 84 --SSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEF 141
Query: 132 EDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLV 180
+++E R++P C HVFH+DCID+W Q ++NCPLCR V + + L+
Sbjct: 142 QEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLI 190
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 15/170 (8%)
Query: 36 SVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSGANTMNTAP--PH 93
++I + ILV +++ S +Y HRH H+ + L +G ++
Sbjct: 60 ALIGILTSALILVSYYTLIS--KYCHRH-----HQTSSSETLNLNHNGEGFFSSTQRIST 112
Query: 94 AHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCID 153
L+ S++K I + Y + + DC+VCLSEFE+NE+ R+LPKC H FH+ CID
Sbjct: 113 NGDGLNESMIKSITVYKYKSG-DGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCID 171
Query: 154 MWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERDLGVVHQMG 203
W +SHSNCPLCRA V + +P V + VSV+ + + HQ G
Sbjct: 172 TWLKSHSNCPLCRAFV---TGVNNPTASVGQNVSVVVANQSN--SAHQTG 216
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 33 MFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSG--------- 83
+ ++I + FILV +++ S ++ HR R+ A + +SS
Sbjct: 59 LLIALIGILASAFILVSYYTLIS----KYCHRRRHNSSSTSAAAINRISSDYTWQGTNNN 114
Query: 84 -----ANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGR 138
N T LD S++K I + Y ++ E DC+VCLSEF++NE+ R
Sbjct: 115 NNNGATNPNQTIGGGGGDGLDESLIKSITVYKYR-KMDGFVESSDCSVCLSEFQENESLR 173
Query: 139 VLPKCRHVFHVDCIDMWFQSHSNCPLCRA 167
+LPKC H FHV CID W +SHSNCPLCRA
Sbjct: 174 LLPKCNHAFHVPCIDTWLKSHSNCPLCRA 202
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 75/152 (49%), Gaps = 32/152 (21%)
Query: 32 IMFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSGANTMNTAP 91
I+ ++LL V+ FI H RY + +R++ LSS N N P
Sbjct: 52 IILFIIVLLSVIFFICSILHLLV-----------RYYLKKKRSN----LSSSPNESNQNP 96
Query: 92 P---------------HAHQA-LDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNE 135
H H + LD +++ +P F+Y I+ KEP DCAVCL EF +++
Sbjct: 97 EFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYK-EIKGTKEPFDCAVCLCEFSEDD 155
Query: 136 NGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRA 167
R+LP C H FH+DCID W S+S CPLCR
Sbjct: 156 KLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRG 187
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 55/240 (22%)
Query: 21 PSASSYVLNGKIMFCSVILLFVVVFILVCFHSYASWLRYRHRHRYR-----YRHRHRRAH 75
P+ S+Y LN KIM +V L V+ I+ H YA ++ R R +R +RH
Sbjct: 20 PNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRRRREAFRGLPVIFRHPFEMPK 79
Query: 76 RLFFLSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNE 135
R L+ +++ +P F +CAVCLS ++ +
Sbjct: 80 R--------------------GLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQD 119
Query: 136 NGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERD 195
R LP C+H+FHVDC+D W + S CP+CR T V P ++E EP E
Sbjct: 120 KARELPNCKHIFHVDCVDTWLTTCSTCPVCR-------TEVEPRPRLEP-----EPREGP 167
Query: 196 LGVVHQMGCSS-------SSSSSSSLPQLESVSVEIPRAREN-FRGLDDMGLSLTNERNG 247
+G Q+ + ++SSSSS ++ +V P +R N FR + LT ER+
Sbjct: 168 VGTAPQLLVETRLNLTVEAASSSSS----DNKTVVSPASRLNSFRKI------LTRERSS 217
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 23 ASSYVLNGKIMFCSVILLFVVVFILVCFHSYA-----SWLRYRHRHRYRYRHRHRRAHRL 77
ASS + I+ +VI + F+LV ++ + +W R R+ R R
Sbjct: 27 ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86
Query: 78 FFLSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIED-------------PKEPLDC 124
+ S P + LD S+++ IP F + + K +C
Sbjct: 87 LMVYS--------PELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQEC 138
Query: 125 AVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITL 175
+VCLSEF+D E R++P C H+FH+DCID+W Q+++NCPLCR V D +
Sbjct: 139 SVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 96 QALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCID 153
+ LD SI++ P F YS + KE L+C+VCL+EFED+E R++PKC HVFH CID
Sbjct: 114 RGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCID 173
Query: 154 MWFQSHSNCPLCRA 167
W +SH+ CPLCRA
Sbjct: 174 AWLRSHTTCPLCRA 187
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 88 NTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVF 147
+TA LD + ++ +P F +S ++ K+ LDC+VCLS+FE E R+LPKCRH F
Sbjct: 88 STASSDRFSGLDKTAIESLPLFRFSA-LKGSKQGLDCSVCLSKFESVEILRLLPKCRHAF 146
Query: 148 HVDCIDMWFQSHSNCPLCRAPVQLD 172
H+ CID W + H+ CPLCR V ++
Sbjct: 147 HIGCIDQWLEQHATCPLCRDRVSME 171
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 37 VILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSGANTMNTAPPHAHQ 96
VI+L ++ L+C S S LR R R+ + ++ +S AN N A
Sbjct: 34 VIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSN-----ASNANA-NLGRLAAAT 87
Query: 97 ALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWF 156
L LK+IP +Y I D K +C +CL +FED E RVLPKC H FHV CID W
Sbjct: 88 GLKKQALKQIPVGLYGSGIIDMKAT-ECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWL 146
Query: 157 QSHSNCPLCRAPVQLD 172
S S+CP CR + L+
Sbjct: 147 LSRSSCPTCRQSLLLE 162
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 83 GANTMNTAPPHAHQALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEFEDNENGRVL 140
GA + A + L+ +++ P F+YS ++ K ++CA+CLSEFED E R +
Sbjct: 80 GAAGQDVLHSRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWM 139
Query: 141 PKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIE--PTERDL 196
P C H FH +CID+W S S CP+CRA + L +P + ++ ++ P ER L
Sbjct: 140 PPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESYPYLNMDVETGGVQKLPNERSL 197
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 34/187 (18%)
Query: 2 MDSNSTTLTAPSGLDQIQNPSASSYVLNGKIMFCSVILLFVVVFILVCFHSYAS--WLRY 59
MD N +T ++ G S+ + KI+ ++I+LF+ V ++ H YA W R
Sbjct: 1 MDDNRSTHSSMFG-------DLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRI 53
Query: 60 RHRHRYRYRHRH-----------------RRAHRLFFLSSGANTMNTAPPHAHQALDLSI 102
+ + + + RR R F G + + ++ L
Sbjct: 54 DQLQQQQQQQQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDAL------SNTGLTSFE 107
Query: 103 LKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNC 162
L +P + + K+ L+C++CLSE + R+LPKC H FHV+CIDMWFQSHS C
Sbjct: 108 LSSLPIVFFRQ--DSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTC 165
Query: 163 PLCRAPV 169
P+CR V
Sbjct: 166 PICRNTV 172
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 33 MFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSGANTMNTAPP 92
M V++L +F + F Y +RH + GA + T
Sbjct: 49 MAVIVVILIAALFFMGFFSIY-------------FRHCSGVPDAGVSPAGGARSRATVN- 94
Query: 93 HAHQALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVD 150
A + LD+S+++ P F+YS + K L+CA+CL+EFED+E R+LPKC HVFH
Sbjct: 95 AAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPH 154
Query: 151 CIDMWFQSHSNCPLCRAPVQLDIT--------LVHPLVQVEEVVSVIEP 191
CID W ++H CP+CRA + + P +++++VV EP
Sbjct: 155 CIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLELQQVVVNPEP 203
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 97 ALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWF 156
LD ++ +P F +S ++ K+ L+C+VCLS+FED E R+LPKCRH FH+ CID W
Sbjct: 98 GLDKKAIESLPFFRFSA-LKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWL 156
Query: 157 QSHSNCPLCRAPVQL--DITLVHPLVQVEEVVSVIEPTERD----LGVVHQMGCSSSSSS 210
+ H+ CPLCR V + D++++ +++ E E D + + + G + SS
Sbjct: 157 EQHATCPLCRNRVNIEDDLSVLGNSSTSLRILNQSETREEDSRLEIYIEREEGTNDGSSR 216
Query: 211 SSSLPQLESVSVEIPRARENFRGLDDMGL 239
SS ++ S+ + RE +D+ L
Sbjct: 217 FSSFRKILKKSLLLE--REGNENIDEKKL 243
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 66/138 (47%), Gaps = 26/138 (18%)
Query: 37 VILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSGA-----NTMNTAP 91
+I+L V F L C Y R H L S G N T
Sbjct: 43 MIVLVSVFFALGCISVYM---------------RRCLQHALGMDSGGGPGNWLNVRQTTE 87
Query: 92 PHAHQALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHV 149
P LD S+++ P F YS + KE L+C VCL+EFED+E R++P+C HVFH
Sbjct: 88 P----GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHP 143
Query: 150 DCIDMWFQSHSNCPLCRA 167
CID W +S + CPLCRA
Sbjct: 144 GCIDAWLRSQTTCPLCRA 161
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 37 VILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSGANTMNTA---PPH 93
V+++ V+F+++ F + S R ++ + F S+ A+ +
Sbjct: 51 VVVVITVLFLVIFFMVFGSIFCRRSNAQF--------SRSSIFRSTDADAESQVVRIRRL 102
Query: 94 AHQALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDC 151
+ LD ++ P F+YS + K ++CAVCL EFED+E R++P C HVFH DC
Sbjct: 103 TARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADC 162
Query: 152 IDMWFQSHSNCPLCRAPVQLD 172
+D+W HS CPLCRA + L+
Sbjct: 163 VDVWLSEHSTCPLCRADLVLN 183
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 93 HAHQ-ALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDC 151
H H +D S + +P F Y I P DCAVCL EFE + R+LPKC H FH+DC
Sbjct: 102 HLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDC 161
Query: 152 IDMWFQSHSNCPLCR 166
ID W SHS CPLCR
Sbjct: 162 IDTWLLSHSTCPLCR 176
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 20/142 (14%)
Query: 102 ILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSN 161
+L+ IP + N +D K L+C VCLSE D + RVLP C H FHV+CID W QS+S
Sbjct: 68 VLRSIPIVDF--NTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNST 125
Query: 162 CPLCRAPVQLDITLVHPLV------------QVEE--VVSVIEPTERDLGVVHQMGCSSS 207
CP+CR V L + P + Q E S PT D ++ GC +
Sbjct: 126 CPICRKRVCLKQSRTRPELGGRDKSFNQNHDQTSEHHEFSTDPPTNTDTAIIEDGGCGEA 185
Query: 208 SSSSSSLPQLESVSVEIPRARE 229
+ P+L +V ++IP A+E
Sbjct: 186 NEGQ---PELTAVVIDIP-AKE 203
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 32/168 (19%)
Query: 1 MMDSNSTTLTAPSGLDQIQNPSASSYVLNGKIMFCSVILLFVVVFILVCFHSYASWLRYR 60
+ ++NST+ + P S VL ++ C++ + ++ + S +WLR
Sbjct: 9 LQEANSTSPA------EASPPFNSDLVLILAVLLCALTCIIGLIAV-----SRCAWLR-- 55
Query: 61 HRHRYRYRHRHRRAHRLFFLSSGANTMNTAPP--HAHQALDLSILKRIPAFVYSPNIEDP 118
R R+R + H PP A++ L +L+ +P YSP+
Sbjct: 56 ---RIASRNRSDQTH--------------PPPVAAANKGLKKKVLRSLPKLTYSPDSPPA 98
Query: 119 KEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCR 166
++ ++CA+CL+EF + RVLP+C H FHV CID W SHS+CP CR
Sbjct: 99 EKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%)
Query: 97 ALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWF 156
+D S++ +P F Y + P DC VCL EFE + R+LPKC H FHV+CID W
Sbjct: 99 GVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWL 158
Query: 157 QSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERDL 196
SHS CPLCR+ + + H L +V E + RD+
Sbjct: 159 LSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSSRDM 198
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 24 SSYVLNGKIMFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSG 83
S+ LN + V++L ++ L+C + R R +R SG
Sbjct: 22 STAALNSDL----VVILAALLCALICVLGLIAVSRCVWLRRLAAGNRT---------VSG 68
Query: 84 ANTMNTAPP--HAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLP 141
+ T + PP A++ L +L+ +P +SP + ++ +CA+CL+EF + RVLP
Sbjct: 69 SQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLP 128
Query: 142 KCRHVFHVDCIDMWFQSHSNCPLCR 166
+C H FHV CID W SHS+CP CR
Sbjct: 129 QCGHGFHVACIDTWLGSHSSCPSCR 153
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 95 HQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDM 154
+ +D S+++ +P F + + K+ L+CAVCL+ FE E R+LPKC+H FHV+C+D
Sbjct: 118 NSGIDRSVIESLPVFRFGA-LSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDT 176
Query: 155 WFQSHSNCPLCRAPVQ-LDITLV 176
W +HS CPLCR V DI L+
Sbjct: 177 WLDAHSTCPLCRYRVDPEDILLI 199
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 97 ALDLSILKRIPAFVYSPNIEDP--KEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDM 154
LD ++++ P F YS E + L+CA+CL+E ED+E R+LP C H+FH+DCID
Sbjct: 95 GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDT 154
Query: 155 WFQSHSNCPLCRA 167
W SH+ CP+CR+
Sbjct: 155 WLYSHATCPVCRS 167
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 96 QALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCID 153
+ LD ++ P FVYS + K L+CA+CL+EFED+E R+LPKC HVFH CI
Sbjct: 94 RGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIG 153
Query: 154 MWFQSHSNCPLCR 166
W Q H CP+CR
Sbjct: 154 AWLQGHVTCPVCR 166
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 16/164 (9%)
Query: 80 LSSGANTMNTAP------PHAHQALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEF 131
L G +T++ P P + L+L I+ P F YS ++ + K L+CA+CL EF
Sbjct: 58 LHHGGDTVSDNPLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEF 117
Query: 132 EDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEE-VVSVIE 190
+ + R+L C HVFH +CID+WF+SH CP+CR + + V+E ++ VI+
Sbjct: 118 DGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPENTKPTVDEMIIDVIQ 177
Query: 191 PTERDLGVVH-------QMGCSSSSSSSSSLPQLESVSVEIPRA 227
T D H Q+ SS +SS+ + +++ + R+
Sbjct: 178 ETSDDEEDDHHRQQTTTQIDTWPSSGQTSSIKKEQNLPEKFSRS 221
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 97 ALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWF 156
LD + + +P F+Y ++P DCAVCL+EF D + R+LP C H FH+ CID W
Sbjct: 180 GLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWL 239
Query: 157 QSHSNCPLCR 166
S+S CPLCR
Sbjct: 240 LSNSTCPLCR 249
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 90 APPHAHQALDLSILKRIPAFVYSP--NIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVF 147
+P + LD +K P+FVY+ IE L+C VCL+EF+D+E R++P C HVF
Sbjct: 49 SPRRPPRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVF 108
Query: 148 HVDCIDMWFQSHSNCPLCRAPV 169
H DC+D+W S CP+CRA V
Sbjct: 109 HADCVDIWLSHSSTCPICRAKV 130
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 77 LFFLSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNEN 136
L G ++ + LD S++ IP FVY N E+ E +C +CL +E +
Sbjct: 91 LGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDF 150
Query: 137 GRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERDL 196
GR L C H FHV+CIDMW SHS CPLCR+PV + + E + + E +
Sbjct: 151 GRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPV------LAAVSDEENLKLAVNAVEEEA 204
Query: 197 GVVHQMGCSSSSSSSSSLPQLESVSVEIPRARENFRGLDDMG 238
V QM S + + S++ VS+ + ++ + DD G
Sbjct: 205 EVRLQM--SPAGENESNVSGDRRVSLSLSVMEDDLKTGDDDG 244
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 120 EPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHP 178
E DC VCL+EFE++E+ R+LPKC H FH+ CID W SH+NCPLCRA + + I++ P
Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAM-ISVTTP 230
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 23/151 (15%)
Query: 65 YRYRHRHRRAHRLFFLSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDC 124
Y R RR+ R F +S ++++ +++ + L+ P YSP + P +C
Sbjct: 77 YIIRCALRRSTR-FMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDEEC 135
Query: 125 AVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCR------------------ 166
+CLS+F E R+LPKC H FHV CID W Q H CP CR
Sbjct: 136 VICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILGDFSQAD 195
Query: 167 ----APVQLDITLVHPLVQVEEVVSVIEPTE 193
P ++ I + PL E V+ I P E
Sbjct: 196 SVTAEPTEIVIVTIVPLEPTEIVIVTIAPLE 226
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 123 DCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQL 171
+C+VCL+EFE++E+ R+LPKC H FH++CID W SH NCPLCRAPV L
Sbjct: 134 ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLL 182
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 38/219 (17%)
Query: 32 IMFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSGANTMNTAP 91
+ F S +L +V F++ + AS R R+ +LF L+
Sbjct: 55 LFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSG------- 107
Query: 92 PHAHQALDLSILKRIPAFVYSPNIEDP---------KEPLDCAVCLSEFEDNENGRVLPK 142
LD + + +P F Y + +EP DCAVCL EF + + R+LP
Sbjct: 108 ------LDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPM 161
Query: 143 CRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERDLGVVHQM 202
C H FH++CID W QS+S CPLCR TL P +E + + D V +
Sbjct: 162 CSHAFHLNCIDTWLQSNSTCPLCRG------TLFSPGFSMENPMFDFDDIREDEEGVTEN 215
Query: 203 GCSSSSSSSSSLPQLESVSVE---IPRARENFRGLDDMG 238
G S +++ + VE +P F+ LD++G
Sbjct: 216 G-------SQKTMEIQEIVVEKGVLPVRLGKFKRLDNVG 247
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 98 LDLSILKRIPAFVYSPNIEDPKE---------PLDCAVCLSEFEDNENGRVLPKCRHVFH 148
+D +L+ +P VYS + ++CAVCL+E ED E R LP+C H FH
Sbjct: 99 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFH 158
Query: 149 VDCIDMWFQSHSNCPLCR 166
+C+DMW SHS CPLCR
Sbjct: 159 AECVDMWLGSHSTCPLCR 176
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 97 ALDLSILKRIPAFVYSPNIEDPK-EPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMW 155
LD +++K+I F + K DC++CL EF ++E+ R+LPKC H FHV CID W
Sbjct: 127 GLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRW 186
Query: 156 FQSHSNCPLCRAPVQLDIT 174
+SHSNCPLCRA + + T
Sbjct: 187 LKSHSNCPLCRAKIIVPTT 205
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 85 NTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCR 144
+ N +PP LD +++ +I Y + DC+VCL EF D E+ R+LP+C
Sbjct: 122 ESWNVSPP---SGLDETLINKITVCKYRRG-DGFVHTTDCSVCLGEFSDGESLRLLPRCS 177
Query: 145 HVFHVDCIDMWFQSHSNCPLCRAPVQ-LDITLVHP 178
H FH CID W +SHSNCPLCRA + + + L P
Sbjct: 178 HAFHQQCIDTWLKSHSNCPLCRANITFVTVGLASP 212
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 37 VILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAHRLFFLSSGANTMNTAPPHAHQ 96
++ +V+ I + A +L H+ YR A + F S A +
Sbjct: 50 TVIAIIVLAIFISLSMVACFL-----HKTFYRAEVEAASQEVFHS-----------RARR 93
Query: 97 ALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDM 154
L+ +++ P F+YS ++ K ++CA+CLSEF D E R +P C H FH +CID+
Sbjct: 94 GLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDV 153
Query: 155 WFQSHSNCPLCRAPVQL 171
W S S CP CRA + L
Sbjct: 154 WLSSQSTCPACRANLSL 170
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 93 HAHQALDLSILKRIPAFVYSPNIEDPKEPL---------DCAVCLSEFEDNENGRVLPKC 143
++ LD S++K +P F+YS K + DCAVCL EFE+ + R LP C
Sbjct: 116 YSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLC 175
Query: 144 RHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPL 179
H FH++CID W +SH NCPLCR + ++ P+
Sbjct: 176 FHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPM 211
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 94 AHQALDLSILKRIPAFVYSPNIED--PKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDC 151
A + LD +I+ P F+YS E ++CAVC+ EFED+E R++P+C HVFH DC
Sbjct: 64 AVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADC 123
Query: 152 IDMWFQSHSNCPLCRAPVQL 171
+ +W HS CPLCR + L
Sbjct: 124 VSVWLSDHSTCPLCRVDLCL 143
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 33 MFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRA--HRLFFLSSGANTMNTA 90
+F ++ LF + F V F +A R R R RL + + +
Sbjct: 54 IFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRL-----STSVVVSR 108
Query: 91 PPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVD 150
P + LD ++ +P + Y+ + E DC +CLS+FE+ E +V+P C HVFHVD
Sbjct: 109 PYSFRRGLDSQAVRSLPVYRYTKAAKQRNE--DCVICLSDFEEGETVKVIPHCGHVFHVD 166
Query: 151 CIDMWFQSHSNCPLCRA 167
C+D W S+ CPLCR+
Sbjct: 167 CVDTWLSSYVTCPLCRS 183
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 96 QALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCID 153
+ L ++ P+F+YS ++ K ++CA+CL+EFED E R++P C H FH CID
Sbjct: 98 RGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCID 157
Query: 154 MWFQSHSNCPLCRA 167
+W S S CP+CRA
Sbjct: 158 VWLSSRSTCPVCRA 171
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 96 QALDLSILKRIPAFVYS--PNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCID 153
+ +D +++ PAF+YS + ++CA+CL EFED E R +P C H FH +CID
Sbjct: 90 RGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCID 149
Query: 154 MWFQSHSNCPLCRAPVQLDI--TLVHPLVQVE 183
W S S CP+CRA + L + HP + VE
Sbjct: 150 EWLSSRSTCPVCRANLSLKSGDSFPHPSMDVE 181
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 65 YRYRHRHRRAHRLFFLSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDC 124
Y R RR F +S ++T +++ ++ L+ P YSP + P +C
Sbjct: 78 YIIRCAFRRTSS-FMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEEC 136
Query: 125 AVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCR 166
+CLS+F E R+LPKC H FHV CID W Q H CP CR
Sbjct: 137 VICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 84 ANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKC 143
+ ++ A P + LD I++ P F YS + +CA+CLSEF D + R++ C
Sbjct: 64 GDLIHVATPPENTGLDPFIIRSFPVFHYSSATKK-NHGTECAICLSEFSDEDTVRLITVC 122
Query: 144 RHVFHVDCIDMWFQSHSNCPLCR 166
RH FH +CID+WF+ H CP+CR
Sbjct: 123 RHPFHSNCIDLWFELHKTCPVCR 145
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 98 LDLSILKRIPAFVYS---PNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDM 154
LD +++ P VY + PL+CAVCL+EF D++ RVLP C HVFH DCID
Sbjct: 104 LDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDP 163
Query: 155 WFQSHSNCPLCRA 167
W + CPLCRA
Sbjct: 164 WLAAAVTCPLCRA 176
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 89 TAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFH 148
+ PP + LD ++ +P FV I++ +CAVCLS E+ +N R+LP C+HVFH
Sbjct: 69 SQPPK--RGLDSLVIASLPTFVV--GIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFH 124
Query: 149 VDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERDLGVVHQMGCSSSS 208
V C+D W + S CP+CR + + P + E V P GV ++ G SS S
Sbjct: 125 VSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPR-EGPVGDFAPPLDFAGVDNKTGGSSVS 183
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 16 DQIQNPSASSYVLNGKIMFCSVILLFVVVFILVCFHSYASWLRYRHRHRYRYRHRHRRAH 75
DQ P+ S YV + V++L V++ LVC S +R R
Sbjct: 36 DQSPTPAPSPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSN---------- 85
Query: 76 RLFFLSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNE 135
+ S A N + + LK YS + P +CA+CLSEF E
Sbjct: 86 ---LVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEE 142
Query: 136 NGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERD 195
++LP C H FHV CID W SHS+CP CR H L+Q E ++
Sbjct: 143 RVKLLPTCHHGFHVRCIDKWLSSHSSCPTCR----------HCLIQTCEKIA-------- 184
Query: 196 LGVVHQMGCSSSSSSSSSLPQLESVSVEI 224
CS +SS +S+ P +S+ ++I
Sbjct: 185 -------DCSQTSSLNSTQPPQDSIILQI 206
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,890,523
Number of Sequences: 539616
Number of extensions: 4074194
Number of successful extensions: 16559
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 15988
Number of HSP's gapped (non-prelim): 643
length of query: 264
length of database: 191,569,459
effective HSP length: 115
effective length of query: 149
effective length of database: 129,513,619
effective search space: 19297529231
effective search space used: 19297529231
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)