Citrus Sinensis ID: 024683

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----
Protein Sequence
MDKFFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLALCIRDTLKLIESHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKIRLALCIQETALQLIEVLSLLSLEDVSSSEYTMTEAAEAGRFQDLFDDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKVCI
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEcccccEEEEEEEEEcccccccHHHHHHHHHHHHHHcccccccccccccEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHcccccccccccccHHHHHHHHHHHHHHccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccccHHHHHHHHccccHHHHHHHHHcccccHHHHHHHHcccccccccccHHHHHHHccccccEcccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEEEEEEccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEc
Coil and Loop (DISEMBL)
mdkffnlkdfdvkpkhpsreslRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLALCIRDTLKLieshedvpigdtdagrFQEFVDDIIstvkcgdvKEKIRLALCIQETALQLIEVLSLLsledvssseytMTEAaeagrfqdlfddvasisddDAEISLLMELVYNFSLNEKYRRRIMSwqkgaplgsgsfgsvyegftddgFFFAVKEvslqdqgtqgEQSVLQLEQEISLLGqfehdnivqyfgtekvci
Flexible Loop (DISEMBL)
mdkffnlkdfdvkpkhpsreslrrwrsfctivknptrrfrmvanldrrseadkKIRQMQEQLRLALCIRDTLKLieshedvpigdtdagrFQEFVDDIISTVKCGDVKEKIRLALCIQETALQLIEVLSLLSLEDVSSSEYTMTEAAEAGRFQDLFDDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYfgtekvci
Low Complexity Region (SEG)
MDKFFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLALCIRDTLKLIESHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKIRLALCIQETALQlievlsllsledvssseYTMTEAAEAGRFQDLFDDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKVCI
Disordered region (IsUnstruct)
**********************RRWRSFCTIVKNPTRRFRMVANL**************EQLRLALCIRDTLKLIESHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKIRLALCIQETALQLIEVLSLLSLEDVSSSEYTMTEAAEAGRFQDLFDDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQ*********VLQLEQEISLLGQFEHDNIVQYFGTEKV**
Disordered Region (DISOPRED)
**KFF**KDF**************WRSFCTIVKNPTRRFRMVANLD****************RLALCIRDTLKLIESHED******************************************QLIEVLSLLSLEDVSSSEY**************************************************WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEV*****************QEISLLGQFEHDNIVQYFGTEKVCI
Disordered Region (DISEMBL)
MDKFFNLKDFDVK********LRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLALCIRDTLKLIESHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKIRLALCIQETALQLIEVLSLLSLEDVSSSEYTMTEAAEAGRFQDLFDDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSL*********SVLQLEQEISLLGQFEHDNIVQYFGTEKVCI
Disordered Region (DISPRO)
*****NLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLALCIRDTLKLIESHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKIRLALCIQETALQLIEVLSLLSLEDVSSSEYTMTEAAEAGRFQDLFDDVASI*****EISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKVCI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDKFFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLALCIRDTLKLIESHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKIRLALCIQETALQLIEVLSLLSLEDVSSSEYTMTEAAEAGRFQDLFDDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKVCI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	264	2.2.26 [Sep-21-2011]
Q39008	608	Mitogen-activated protein	yes	no	0.276	0.120	0.657	3e-20
Q9SZ67	1895	Probable WRKY transcripti	no	no	0.276	0.038	0.589	3e-17
O81108	1014	Calcium-transporting ATPa	no	no	0.541	0.141	0.360	2e-15
O64806	1015	Putative calcium-transpor	no	no	0.405	0.105	0.403	4e-14
Q37145	1020	Calcium-transporting ATPa	no	no	0.503	0.130	0.387	4e-14
Q2QMX9	1020	Calcium-transporting ATPa	no	no	0.378	0.098	0.409	1e-12
Q8RUN1	1043	Calcium-transporting ATPa	no	no	0.268	0.068	0.493	5e-12
Q9M2L4	1025	Putative calcium-transpor	no	no	0.238	0.061	0.492	2e-11
Q2RAS0	1017	Probable calcium-transpor	no	no	0.299	0.077	0.449	2e-11
Q2QY12	1039	Probable calcium-transpor	no	no	0.257	0.065	0.471	2e-10

>sp|Q39008|M3K1_ARATH Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2

 Score = 99.0 bits (245), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 55/73 (75%)

Query: 189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
           I SWQKG  LG GSFGSVYEG + DG FFAVKEVSL DQG+Q ++ + QLE EI LL Q 
Sbjct: 330 ITSWQKGQLLGRGSFGSVYEGISGDGDFFAVKEVSLLDQGSQAQECIQQLEGEIKLLSQL 389

Query: 249 EHDNIVQYFGTEK 261
           +H NIV+Y GT K
Sbjct: 390 QHQNIVRYRGTAK 402

Involved in the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6) downstream of bacterial flagellin receptor FLS2. May be involved in the cold and salinity stress-mediated MAP kinase signaling cascade (MEKK1, MEK1/MKK2 and MPK4/MPK6). Activates downstream MKK2, MKK4 and MKK5.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 5

>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 51/73 (69%)

Query: 189  IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
            I  WQKG  LG GS GSVYEG + DG FFA KEVSL DQG+Q  + + Q+E  I+LL Q 
Sbjct: 1623 ITCWQKGQLLGRGSLGSVYEGISADGDFFAFKEVSLLDQGSQAHEWIQQVEGGIALLSQL 1682

Query: 249  EHDNIVQYFGTEK 261
            +H NIV+Y GT K
Sbjct: 1683 QHQNIVRYRGTTK 1695

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. May act also as a disease resistance protein with a serine/threonine-protein kinase activity.

Arabidopsis thaliana (taxid: 3702)

>sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 18/161 (11%)

Query: 1   MDKFFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQE 60
           M+ + N ++FDVK KH S E L +WR+ C +VKNP RRFR  ANL +R EA    R  QE
Sbjct: 1   MESYLN-ENFDVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59

Query: 61  QLRLALCI-RDTLKLIE----SHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKIRLAL 115
           +LR+A+ + +   + I     S   VP  D  A  F+   D++ S V+  DVK K++   
Sbjct: 60  KLRIAVLVSKAAFQFISGVSPSDYTVP-EDVKAAGFEICADELGSIVESHDVK-KLKFHG 117

Query: 116 CIQETALQLIEVLSLLSLEDVSSSEYTMTEAAEAGRFQDLF 156
            +   A +L            S ++   TEAA+  + Q+LF
Sbjct: 118 GVDGLAGKL----------KASPTDGLSTEAAQLSQRQELF 148

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2

 Score = 78.6 bits (192), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 7/114 (6%)

Query: 1   MDKFFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQE 60
           M+ + N  +FDVK KH S E L +WR+ C++VKNP RRFR  ANL +R EA    R  QE
Sbjct: 1   MESYLN-SNFDVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59

Query: 61  QLRLALCI-RDTLKLIE----SHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKE 109
           +LR+A+ + +   + I     S   VP  +  A  F    D++ S V+  DVK+
Sbjct: 60  KLRIAVLVSKAAFQFISGVSPSDYKVP-EEVKAAGFDICADELGSIVEGHDVKK 112

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3

 Score = 78.6 bits (192), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 14/147 (9%)

Query: 1   MDKFFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQE 60
           M+ + N    DVKPK+ S E+L+RWR  C IVKNP RRFR  ANL +RSEA+   R  QE
Sbjct: 1   MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60

Query: 61  QLRLALCIR-------DTLKLIESHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKIRL 113
           + R+A+ +        ++LKL  S   +P     AG F+   D++ S V+  D+K+    
Sbjct: 61  KFRVAVLVSQAALQFINSLKL-SSEYTLPEEVRKAG-FEICPDELGSIVEGHDLKK---- 114

Query: 114 ALCIQETALQLIEVLSLLSLEDVSSSE 140
            L I      L E LS      +S+SE
Sbjct: 115 -LKIHGGTEGLTEKLSTSIASGISTSE 140

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 5/105 (4%)

Query: 12  VKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLALCI-RD 70
           VK K+ S E+LRRWR  C +VKNP RRFR  ANLD+R EA        E+LR+A+ + + 
Sbjct: 12  VKAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKA 71

Query: 71  TLKLIES----HEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKI 111
            L+ I+      E V   +  A  FQ   D++ S V+  D K+ I
Sbjct: 72  ALQFIQGLSLRSEYVVPEEVKAAGFQICADELGSIVEGHDSKKLI 116

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1

 Score = 71.6 bits (174), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 55/73 (75%), Gaps = 2/73 (2%)

Query: 7  LKDFDVKPKHPSRESLRRWR-SFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLA 65
          LK F+V  K+PS E+ RRWR +  T+VKN  RRFRMV +LD+RS+A+ + R++QE+LR+A
Sbjct: 12 LKSFEVPAKNPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQEKLRVA 71

Query: 66 LCI-RDTLKLIES 77
          L + +  L+ I++
Sbjct: 72 LFVQKAALQFIDA 84

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 47/63 (74%)

Query: 7  LKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLAL 66
          LKDF+V  K+PS E+ +RWRS   +VKN  RRFRM++NLD+ +E +KK  Q+QE++R+  
Sbjct: 5  LKDFEVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEKIRVVF 64

Query: 67 CIR 69
           ++
Sbjct: 65 YVQ 67

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 10/89 (11%)

Query: 1  MDKFFNLKDFDVKPKHPSRESLRRWR-SFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQ 59
          +D++   + FDV  K+PS E+ RRWR +  TIVKN  RRFR V +LDRRS    K+R  Q
Sbjct: 4  LDRYLQ-EHFDVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQ 62

Query: 60 EQLRLALCIR--------DTLKLIESHED 80
          E++R+AL ++        D L LI S  D
Sbjct: 63 EKIRVALYVQQAALIFSDDELALITSKHD 91

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

>sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 2/70 (2%)

Query: 1  MDKFFNLKDFDVKPKHPSRESLRRWR-SFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQ 59
          +D++   ++FDV  K+PS E+ RRWR +  TIVKN  RRFR V +L+RRS    K+R  Q
Sbjct: 4  LDRYLQ-ENFDVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQ 62

Query: 60 EQLRLALCIR 69
          E++R+AL ++
Sbjct: 63 EKIRVALYVQ 72

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 6

EC: .

EC: 3

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
359486016	559	PREDICTED: mitogen-activated protein kin	0.386	0.182	0.637	3e-32
298204644	719	unnamed protein product [Vitis vinifera]	0.386	0.141	0.637	5e-32
255545546	555	Mitogen-activated protein kinase kinase	0.382	0.181	0.623	2e-29
223946959	629	unknown [Zea mays] gi|413933338|gb|AFW67	0.386	0.162	0.601	2e-28
223949715	369	unknown [Zea mays]	0.386	0.276	0.601	4e-28
222625638	575	hypothetical protein OsJ_12265 [Oryza sa	0.386	0.177	0.601	5e-28
218193598	632	hypothetical protein OsI_13190 [Oryza sa	0.386	0.161	0.601	5e-28
115454833	654	Os03g0703400 [Oryza sativa Japonica Grou	0.386	0.155	0.601	5e-28
224082218	548	predicted protein [Populus trichocarpa]	0.333	0.160	0.681	6e-28
357117897	646	PREDICTED: mitogen-activated protein kin	0.386	0.157	0.611	7e-28

>gi|359486016|ref|XP_002264549.2| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Vitis vinifera]

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/102 (63%), Positives = 86/102 (84%)

Query: 160 ASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAV 219
           ++ +D+D + S+ +E +Y  S N +++R I SWQ+G  LGSGSFG+VYEG+TDDGFFFAV
Sbjct: 254 STSNDEDEDSSMTLEPIYGISPNGQFKRTINSWQRGELLGSGSFGTVYEGYTDDGFFFAV 313

Query: 220 KEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           KEVSL DQG+QG+QS+ QLEQEISLL QFEH+NIV+Y+GT+K
Sbjct: 314 KEVSLLDQGSQGKQSIYQLEQEISLLSQFEHENIVRYYGTDK 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298204644|emb|CBI23919.3| unnamed protein product [Vitis vinifera]

 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 65/102 (63%), Positives = 86/102 (84%)

Query: 160 ASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAV 219
           ++ +D+D + S+ +E +Y  S N +++R I SWQ+G  LGSGSFG+VYEG+TDDGFFFAV
Sbjct: 414 STSNDEDEDSSMTLEPIYGISPNGQFKRTINSWQRGELLGSGSFGTVYEGYTDDGFFFAV 473

Query: 220 KEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           KEVSL DQG+QG+QS+ QLEQEISLL QFEH+NIV+Y+GT+K
Sbjct: 474 KEVSLLDQGSQGKQSIYQLEQEISLLSQFEHENIVRYYGTDK 515

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545546|ref|XP_002513833.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis] gi|223546919|gb|EEF48416.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 79/101 (78%)

Query: 161 SISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVK 220
           + S+DD   S   EL+ N S +E++RR I  W+KG  LG GSFGSVYEG   DGFFFA+K
Sbjct: 252 TTSNDDDSSSTTTELMSNISPHERFRRMISDWEKGDLLGRGSFGSVYEGIAHDGFFFAIK 311

Query: 221 EVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           EVSL DQG+QG+QS+ QLEQEI+LL QFEH+NIV+Y+GT+K
Sbjct: 312 EVSLLDQGSQGKQSIYQLEQEIALLSQFEHENIVRYYGTDK 352

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223946959|gb|ACN27563.1| unknown [Zea mays] gi|413933338|gb|AFW67889.1| putative MAP kinase superfamily protein isoform 1 [Zea mays] gi|413933339|gb|AFW67890.1| putative MAP kinase superfamily protein isoform 2 [Zea mays] gi|413933340|gb|AFW67891.1| putative MAP kinase superfamily protein isoform 3 [Zea mays]

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 82/103 (79%), Gaps = 1/103 (0%)

Query: 159 VASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFA 218
           +++ +DDDA  S   E ++  S N K++R+I SW +GA LGSGSFG VYEG +D+G FFA
Sbjct: 328 LSTTNDDDAS-STTTEAMFIISPNGKFKRKIKSWMRGALLGSGSFGMVYEGISDEGAFFA 386

Query: 219 VKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           VKEVSL DQG+  +QS++ LEQEI+LLGQFEH+NIVQY+GT+K
Sbjct: 387 VKEVSLLDQGSNAQQSIVALEQEIALLGQFEHENIVQYYGTDK 429

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223949715|gb|ACN28941.1| unknown [Zea mays]

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 82/103 (79%), Gaps = 1/103 (0%)

Query: 159 VASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFA 218
           +++ +DDDA  S   E ++  S N K++R+I SW +GA LGSGSFG VYEG +D+G FFA
Sbjct: 68  LSTTNDDDAS-STTTEAMFIISPNGKFKRKIKSWMRGALLGSGSFGMVYEGISDEGAFFA 126

Query: 219 VKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           VKEVSL DQG+  +QS++ LEQEI+LLGQFEH+NIVQY+GT+K
Sbjct: 127 VKEVSLLDQGSNAQQSIVALEQEIALLGQFEHENIVQYYGTDK 169

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222625638|gb|EEE59770.1| hypothetical protein OsJ_12265 [Oryza sativa Japonica Group]

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 1/103 (0%)

Query: 159 VASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFA 218
           +++ +DDDA  S   E ++  S N K++R+I SW +GA LGSGSFG VYEG +D+G FFA
Sbjct: 271 LSTTNDDDAS-STTTEAMFIISPNGKFKRKIKSWMRGALLGSGSFGMVYEGISDEGAFFA 329

Query: 219 VKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           VKEVSL DQG+  +QS+L LEQEI+LL QFEH+NIVQY+GT+K
Sbjct: 330 VKEVSLLDQGSNAQQSILALEQEIALLSQFEHENIVQYYGTDK 372

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218193598|gb|EEC76025.1| hypothetical protein OsI_13190 [Oryza sativa Indica Group]

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 1/103 (0%)

Query: 159 VASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFA 218
           +++ +DDDA  S   E ++  S N K++R+I SW +GA LGSGSFG VYEG +D+G FFA
Sbjct: 328 LSTTNDDDAS-STTTEAMFIISPNGKFKRKIKSWMRGALLGSGSFGMVYEGISDEGAFFA 386

Query: 219 VKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           VKEVSL DQG+  +QS+L LEQEI+LL QFEH+NIVQY+GT+K
Sbjct: 387 VKEVSLLDQGSNAQQSILALEQEIALLSQFEHENIVQYYGTDK 429

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115454833|ref|NP_001051017.1| Os03g0703400 [Oryza sativa Japonica Group] gi|41469440|gb|AAS07241.1| putative protein kinase [Oryza sativa Japonica Group] gi|108710641|gb|ABF98436.1| Mitogen-activated protein kinase 1, putative, expressed [Oryza sativa Japonica Group] gi|113549488|dbj|BAF12931.1| Os03g0703400 [Oryza sativa Japonica Group]

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 81/103 (78%), Gaps = 1/103 (0%)

Query: 159 VASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFA 218
           +++ +DDDA  S   E ++  S N K++R+I SW +GA LGSGSFG VYEG +D+G FFA
Sbjct: 350 LSTTNDDDAS-STTTEAMFIISPNGKFKRKIKSWMRGALLGSGSFGMVYEGISDEGAFFA 408

Query: 219 VKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           VKEVSL DQG+  +QS+L LEQEI+LL QFEH+NIVQY+GT+K
Sbjct: 409 VKEVSLLDQGSNAQQSILALEQEIALLSQFEHENIVQYYGTDK 451

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082218|ref|XP_002306607.1| predicted protein [Populus trichocarpa] gi|222856056|gb|EEE93603.1| predicted protein [Populus trichocarpa]

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 60/88 (68%), Positives = 73/88 (82%)

Query: 174 ELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQ 233
           E + N S N ++RR I  W+KG  LG GSFGSVYEG +DDGFFFAVKEVSL DQG+QG+Q
Sbjct: 258 EPMSNISPNLRFRRSITDWEKGELLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQGKQ 317

Query: 234 SVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           S+ QLEQEI+LL +FEH+NIVQY+GT+K
Sbjct: 318 SIYQLEQEIALLSRFEHENIVQYYGTDK 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357117897|ref|XP_003560698.1| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Brachypodium distachyon]

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/103 (61%), Positives = 80/103 (77%), Gaps = 1/103 (0%)

Query: 159 VASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFA 218
           +++ +DDDA  S   E V+  S N K++R I SW +GA LGSGSFG VYEG +D+G FFA
Sbjct: 343 LSTTNDDDAS-STNTEAVFIISPNGKFKRNIKSWMRGALLGSGSFGMVYEGISDEGAFFA 401

Query: 219 VKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
           VKEVSL DQG+  +QS+L LEQEI+LL QFEH+NIVQY+GT+K
Sbjct: 402 VKEVSLLDQGSNAQQSILALEQEIALLSQFEHENIVQYYGTDK 444

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
TAIR|locus:2133559	608	MEKK1 "MAPK/ERK kinase kinase	0.431	0.187	0.5	8.5e-20
TAIR|locus:2133539	773	MAPKKK9 "mitogen-activated pro	0.268	0.091	0.633	2.6e-18
TAIR|locus:2133529	560	MEKK3 "MAPK/ERK kinase kinase	0.329	0.155	0.533	2.2e-17
TAIR|locus:2118116	1895	WRKY19 [Arabidopsis thaliana (	0.276	0.038	0.589	1.6e-15
TAIR|locus:2059201	1015	ACA7 "auto-regulated Ca2+-ATPa	0.409	0.106	0.398	1.6e-15
TAIR|locus:2120096	1014	ACA2 "calcium ATPase 2" [Arabi	0.409	0.106	0.407	3.6e-14
TAIR|locus:2029794	1020	ACA1 "autoinhibited Ca2+-ATPas	0.416	0.107	0.408	4.2e-13
TAIR|locus:2026674	883	YDA "YODA" [Arabidopsis thalia	0.268	0.080	0.5	1.6e-10
TAIR|locus:2082528	1025	ACA11 "autoinhibited Ca2+-ATPa	0.401	0.103	0.375	2e-10
TAIR|locus:2024832	609	MAP3KA "mitogen-activated prot	0.265	0.114	0.478	8.6e-10

TAIR|locus:2133559 MEKK1 "MAPK/ERK kinase kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 244 (91.0 bits), Expect = 8.5e-20, P = 8.5e-20
 Identities = 61/122 (50%), Positives = 74/122 (60%)

Query:   145 EAAEAG-RF---QDLFDDVASISDDDAEISLLMELVYNFS-LNEKYRRRIMSWQKGAPLG 199
             EA E G RF    D  D+  S + ++ + S     V N S +       I SWQKG  LG
Sbjct:   284 EAEEMGARFIQLGDTADETCSFTTNEGDSS---STVSNTSPIYPDGGAIITSWQKGQLLG 340

Query:   200 SGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT 259
              GSFGSVYEG + DG FFAVKEVSL DQG+Q ++ + QLE EI LL Q +H NIV+Y GT
Sbjct:   341 RGSFGSVYEGISGDGDFFAVKEVSLLDQGSQAQECIQQLEGEIKLLSQLQHQNIVRYRGT 400

Query:   260 EK 261
              K
Sbjct:   401 AK 402

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IGI

GO:0006970 "response to osmotic stress" evidence=IGI;IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009611 "response to wounding" evidence=RCA;IDA

GO:0003677 "DNA binding" evidence=IDA

GO:0019900 "kinase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000165 "MAPK cascade" evidence=IMP;RCA;IPI

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2133539 MAPKKK9 "mitogen-activated protein kinase kinase kinase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 2.6e-18, P = 2.6e-18
 Identities = 45/71 (63%), Positives = 55/71 (77%)

Query:   191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
             SWQKG  L  GSFGSVYE  ++DG FFAVKEVSL DQG+Q ++ + QLE EI+LL Q EH
Sbjct:   500 SWQKGQLLRQGSFGSVYEAISEDGDFFAVKEVSLLDQGSQAQECIQQLEGEIALLSQLEH 559

Query:   251 DNIVQYFGTEK 261
              NI++Y GT+K
Sbjct:   560 QNILRYRGTDK 570

GO:0005737 "cytoplasm" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0031347 "regulation of defense response" evidence=IMP

TAIR|locus:2133529 MEKK3 "MAPK/ERK kinase kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.2e-17, P = 2.2e-17
 Identities = 48/90 (53%), Positives = 62/90 (68%)

Query:   174 ELVYNFSLNEKYRRR--IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQG 231
             +L+ N  L E +R+   I SW KG  LG GS+ SVYE  ++DG FFAVKEVSL D+G Q 
Sbjct:   284 KLMRN-KLIENFRKPEDITSWLKGQLLGRGSYASVYEAISEDGDFFAVKEVSLLDKGIQA 342

Query:   232 EQSVLQLEQEISLLGQFEHDNIVQYFGTEK 261
             ++ + QLE EI+LL Q +H NIV+Y GT K
Sbjct:   343 QECIQQLEGEIALLSQLQHQNIVRYRGTAK 372

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2118116 WRKY19 [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 43/73 (58%), Positives = 51/73 (69%)

Query:   189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
             I  WQKG  LG GS GSVYEG + DG FFA KEVSL DQG+Q  + + Q+E  I+LL Q 
Sbjct:  1623 ITCWQKGQLLGRGSLGSVYEGISADGDFFAFKEVSLLDQGSQAHEWIQQVEGGIALLSQL 1682

Query:   249 EHDNIVQYFGTEK 261
             +H NIV+Y GT K
Sbjct:  1683 QHQNIVRYRGTTK 1695

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006952 "defense response" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0043531 "ADP binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
 Identities = 45/113 (39%), Positives = 65/113 (57%)

Query:     1 MDKFFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQE 60
             M+ + N  +FDVK KH S E L +WR+ C++VKNP RRFR  ANL +R EA    R  QE
Sbjct:     1 MESYLN-SNFDVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59

Query:    61 QLRLALCI-RDTLKLIE--SHEDVPIGD-TDAGRFQEFVDDIISTVKCGDVKE 109
             +LR+A+ + +   + I   S  D  + +   A  F    D++ S V+  DVK+
Sbjct:    60 KLRIAVLVSKAAFQFISGVSPSDYKVPEEVKAAGFDICADELGSIVEGHDVKK 112

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 3.6e-14, P = 3.6e-14
 Identities = 46/113 (40%), Positives = 66/113 (58%)

Query:     1 MDKFFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQE 60
             M+ + N ++FDVK KH S E L +WR+ C +VKNP RRFR  ANL +R EA    R  QE
Sbjct:     1 MESYLN-ENFDVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59

Query:    61 QLRLALCI-RDTLKLIE--SHEDVPIG-DTDAGRFQEFVDDIISTVKCGDVKE 109
             +LR+A+ + +   + I   S  D  +  D  A  F+   D++ S V+  DVK+
Sbjct:    60 KLRIAVLVSKAAFQFISGVSPSDYTVPEDVKAAGFEICADELGSIVESHDVKK 112

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0006810 "transport" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA;TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006820 "anion transport" evidence=RCA

GO:0006862 "nucleotide transport" evidence=RCA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015696 "ammonium transport" evidence=RCA

GO:0015802 "basic amino acid transport" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

GO:0043269 "regulation of ion transport" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0015085 "calcium ion transmembrane transporter activity" evidence=IDA

TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 4.2e-13, P = 4.2e-13
 Identities = 49/120 (40%), Positives = 71/120 (59%)

Query:     1 MDKFFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQE 60
             M+ + N    DVKPK+ S E+L+RWR  C IVKNP RRFR  ANL +RSEA+   R  QE
Sbjct:     1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60

Query:    61 QLRLALCIR-------DTLKLIESHEDVPIGDTDAGRFQEFVDDIISTVKCGDVKEKIRL 113
             + R+A+ +        ++LKL  S   +P     AG F+   D++ S V+  D+K K+++
Sbjct:    61 KFRVAVLVSQAALQFINSLKL-SSEYTLPEEVRKAG-FEICPDELGSIVEGHDLK-KLKI 117

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS;TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006882 "cellular zinc ion homeostasis" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

GO:0009706 "chloroplast inner membrane" evidence=IDA;TAS

GO:0005262 "calcium channel activity" evidence=TAS

TAIR|locus:2026674 YDA "YODA" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 36/72 (50%), Positives = 47/72 (65%)

Query:   192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
             W+KG  LG GSFG VY GF ++ G   A+KEV+L     +  +S  QL QEIS+L +  H
Sbjct:   400 WKKGRLLGMGSFGHVYLGFNSESGEMCAMKEVTLCSDDPKSRESAQQLGQEISVLSRLRH 459

Query:   251 DNIVQYFGTEKV 262
              NIVQY+G+E V
Sbjct:   460 QNIVQYYGSETV 471

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010103 "stomatal complex morphogenesis" evidence=IMP

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0010229 "inflorescence development" evidence=IMP

TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 42/112 (37%), Positives = 67/112 (59%)

Query:     7 LKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRLAL 66
             LKDF+V  K+PS E+ +RWRS   +VKN  RRFRM++NLD+ +E +KK  Q+QE++R+  
Sbjct:     5 LKDFEVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEKIRVVF 64

Query:    67 CIRDT-LKLIESHEDVPIGDTD----AGRFQEFVDDIISTVKCGDVKEKIRL 113
              ++    + I++        TD    AG + E  D++ S V+  D K   ++
Sbjct:    65 YVQKAAFQFIDAGARPEYKLTDEVKKAGFYVE-ADELASMVRNHDTKSLTKI 115

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0006754 "ATP biosynthetic process" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IGI

GO:0043069 "negative regulation of programmed cell death" evidence=IGI

GO:0055081 "anion homeostasis" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2024832 MAP3KA "mitogen-activated protein kinase kinase kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 8.6e-10, P = 8.6e-10
 Identities = 34/71 (47%), Positives = 46/71 (64%)

Query:   191 SWQKGAPLGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
             +W+KG  LGSG+FG VY GF  + G   A+KEV +       ++ + QL QEI+LL Q  
Sbjct:   213 TWKKGKFLGSGTFGQVYLGFNSEKGKMCAIKEVKVISDDQTSKECLKQLNQEINLLNQLC 272

Query:   250 HDNIVQYFGTE 260
             H NIVQY+G+E
Sbjct:   273 HPNIVQYYGSE 283

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00005840001	SubName- Full=Chromosome chr12 scaffold_159, whole genome shotgun sequence; (552 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00026919001	SubName- Full=Putative uncharacterized protein (Chromosome chr15 scaffold_40, whole genome shot [...] (375 aa)						•		•	0.800
	GSVIVG00025258001	SubName- Full=Chromosome chr9 scaffold_33, whole genome shotgun sequence; (355 aa)						•		•	0.800
	GSVIVG00016645001	SubName- Full=Putative uncharacterized protein (Chromosome chr11 scaffold_13, whole genome shot [...] (354 aa)						•		•	0.800
	GSVIVG00016514001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (354 aa)						•		•	0.800
	GSVIVG00003414001	SubName- Full=Chromosome undetermined scaffold_143, whole genome shotgun sequence; (1088 aa)						•		•	0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	264
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-28
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-18
pfam12515	47	pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoi	5e-17
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-13
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-12
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-12
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-12
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-09
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-09
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	7e-09
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	8e-09
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-08
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-08
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-08
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-08
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	6e-08
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	9e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-07
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-07
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-06
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-06
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	5e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	5e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	6e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	6e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	8e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.001
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.001
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	0.002
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.003
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.003
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.003
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.004
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	0.004
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.004

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  107 bits (268), Expect = 6e-28
 Identities = 48/72 (66%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
            W+KG  LGSGSFGSVYEG   DDG FFAVKEVSL D G  G+++V QLEQEI+LL + +
Sbjct: 1   RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ 60

Query: 250 HDNIVQYFGTEK 261
           H NIVQY GTE+
Sbjct: 61  HPNIVQYLGTER 72

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 81.4 bits (202), Expect = 2e-18
 Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 4/71 (5%)

Query: 191 SWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
            W +G  LG GSFGSVY     D G   AVK V L       E+ +  LE+EI +L   +
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSG---DSEEELEALEREIRILSSLQ 57

Query: 250 HDNIVQYFGTE 260
           H NIV+Y+G+E
Sbjct: 58  HPNIVRYYGSE 68

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|204949 pfam12515, CaATP_NAI, Ca2+-ATPase N terminal autoinhibitory domain

 Score = 72.4 bits (178), Expect = 5e-17
 Identities = 22/45 (48%), Positives = 28/45 (62%)

Query: 7  LKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEA 51
             FD+  K+ S E+LRRWR    +VKN  RRFR  A+L +R EA
Sbjct: 3  DDPFDIPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLAKRCEA 47

This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00689, pfam00122, pfam00702, pfam00690. There is a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important. This family is the N terminal autoinhibitory domain of an endosomal Ca2+-ATPase. Length = 47

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 8/78 (10%)

Query: 192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           WQ+G  +G G+FG VY     D G   AVKE+ +QD      +++ ++  E+ +L   +H
Sbjct: 2   WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDP---KTIKEIADEMKVLELLKH 58

Query: 251 DNIVQYFGTE----KVCI 264
            N+V+Y+G E    KV I
Sbjct: 59  PNLVKYYGVEVHREKVYI 76

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE---QSVLQ-LEQEISLLG 246
           W KGA +GSGSFGSVY G     G   AVK+V L       +   +S+L  L +EI+LL 
Sbjct: 2   WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLK 61

Query: 247 QFEHDNIVQYFGT 259
           + +H+NIVQY G+
Sbjct: 62  ELQHENIVQYLGS 74

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 64.5 bits (157), Expect = 3e-12
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGT-QGEQSVLQLEQEISLLGQFEH 250
           W KG  LG G++G+VY G T+ G   AVK+V L        E+   +L++E+ LL   +H
Sbjct: 2   WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH 61

Query: 251 DNIVQYFGT 259
            NIVQY GT
Sbjct: 62  VNIVQYLGT 70

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 64.1 bits (156), Expect = 5e-12
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           W++G  LG G+FG VY  +  D G   AVK+V       + ++ V  LE EI LL   +H
Sbjct: 4   WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH 63

Query: 251 DNIVQYFGT----EKVCI 264
           + IVQY+G     E + I
Sbjct: 64  ERIVQYYGCLRDDETLSI 81

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 4/70 (5%)

Query: 193 QKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
           Q G  +G G+FG VY+G   + G F A+K++SL+      E+++  + QEI LL   +H 
Sbjct: 3   QLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK---EEALKSIMQEIDLLKNLKHP 59

Query: 252 NIVQYFGTEK 261
           NIV+Y G+ +
Sbjct: 60  NIVKYIGSIE 69

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++    LGSGSFG+VY+      G   AVK +  + + ++ +Q+     +EI +L +  H
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTAR---REIRILRRLSH 57

Query: 251 DNIVQYFGT 259
            NIV+    
Sbjct: 58  PNIVRLIDA 66

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 54.8 bits (133), Expect = 6e-09
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 192 WQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++    LG GSFG VY       G   A+K +  +      ++   ++ +EI +L + +H
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKI----KKDRERILREIKILKKLKH 56

Query: 251 DNIVQYFGTE 260
            NIV+ +   
Sbjct: 57  PNIVRLYDVF 66

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 54.8 bits (132), Expect = 7e-09
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSL----QDQGTQGEQSVLQ-LEQEISLL 245
           W KG  +G G++G VY       G   AVK+V L      +    ++ +++ L  EI  L
Sbjct: 3   WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETL 62

Query: 246 GQFEHDNIVQYFGTEK 261
              +H NIVQY G E 
Sbjct: 63  KDLDHLNIVQYLGFET 78

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 54.6 bits (132), Expect = 8e-09
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 8/62 (12%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG GS+GSVY+    + G   A+K V +       E+ + ++ +EIS+L Q +   IV+Y
Sbjct: 11  LGEGSYGSVYKAIHKETGQVVAIKVVPV-------EEDLQEIIKEISILKQCDSPYIVKY 63

Query: 257 FG 258
           +G
Sbjct: 64  YG 65

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG G FG+VY       G   A+K +  +D  +  E+    L +EI +L +  H NIV+ 
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEE----LLREIEILKKLNHPNIVKL 56

Query: 257 FG 258
           +G
Sbjct: 57  YG 58

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 6/68 (8%)

Query: 192 WQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++    +G G FG VY+      G   A+K + L+   ++ ++  +    EI +L + +H
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLE---SKEKKEKII--NEIQILKKCKH 56

Query: 251 DNIVQYFG 258
            NIV+Y+G
Sbjct: 57  PNIVKYYG 64

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 53.1 bits (127), Expect = 3e-08
 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 190 MSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
           ++W++G  LG G+FG VY  +  D G   A K+V    +  +  + V  LE EI LL   
Sbjct: 2   INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL 61

Query: 249 EHDNIVQYFG 258
           +H+ IVQY+G
Sbjct: 62  QHERIVQYYG 71

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 53.1 bits (127), Expect = 3e-08
 Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 191 SWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
           +W+ G  LG G+FG VY  +  D G   AVK+V       +  + V  LE EI LL    
Sbjct: 3   NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR 62

Query: 250 HDNIVQYFG 258
           HD IVQY+G
Sbjct: 63  HDRIVQYYG 71

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 52.0 bits (124), Expect = 6e-08
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 191 SWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
           +W+ G  LG G+FG VY  +  D G   AVK+V    +  +  + V  LE EI LL    
Sbjct: 3   NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL 62

Query: 250 HDNIVQYFG 258
           H+ IVQY+G
Sbjct: 63  HERIVQYYG 71

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 51.4 bits (123), Expect = 9e-08
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQS--VLQLEQEISLLGQF 248
           W KG  LG+G+F S Y+      G   AVK+V+   + T  EQ   V  L +EI L+ + 
Sbjct: 2   WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYV-RNTSSEQEEVVEALRKEIRLMARL 60

Query: 249 EHDNIVQYFG 258
            H +I++  G
Sbjct: 61  NHPHIIRMLG 70

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query: 197 PLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
            +GSG++G VY+      G   A+K + L+            ++QEIS+L +  H NIV 
Sbjct: 10  RIGSGTYGDVYKARDIATGELVAIKVIKLEPG-----DDFEIIQQEISMLKECRHPNIVA 64

Query: 256 YFGT 259
           YFG+
Sbjct: 65  YFGS 68

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 50.2 bits (121), Expect = 2e-07
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 12/77 (15%)

Query: 193 QKGAPLGSGSFGSVYEGFTDDGFFF-----AVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
           + G  LG G+FG VY+G             AVK  +L++  +  E+   +  +E S++ +
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVK--TLKEGAS--EEEREEFLEEASIMKK 57

Query: 248 FEHDNIVQYFGTEKVCI 264
             H NIV+  G   VC 
Sbjct: 58  LSHPNIVRLLG---VCT 71

Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 47.9 bits (115), Expect = 1e-06
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 12/77 (15%)

Query: 193 QKGAPLGSGSFGSVYEGFTDDGFFF-----AVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
             G  LG G+FG VY+G             AVK +    +    EQ + +  +E  ++ +
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTL----KEDASEQQIEEFLREARIMRK 57

Query: 248 FEHDNIVQYFGTEKVCI 264
            +H N+V+  G   VC 
Sbjct: 58  LDHPNVVKLLG---VCT 71

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 12/72 (16%)

Query: 198 LGSGSFGSVYEGFTDDGFFF-----AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
           LG G+FG VY+G             AVK +    +    EQ + +  +E  ++ + +H N
Sbjct: 7   LGEGAFGEVYKGTLKGKGDGKEVEVAVKTL----KEDASEQQIEEFLREARIMRKLDHPN 62

Query: 253 IVQYFGTEKVCI 264
           IV+  G   VC 
Sbjct: 63  IVKLLG---VCT 71

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 46.4 bits (111), Expect = 4e-06
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 11/72 (15%)

Query: 197 PLGSGSFGSVYEGFTDDGFFF----AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
            LG G+FG VY+G            AVK  +L++  ++ E+      +E  ++ +  H N
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVK--TLKEDASEEERK--DFLKEARVMKKLGHPN 57

Query: 253 IVQYFGTEKVCI 264
           +V+  G   VC 
Sbjct: 58  VVRLLG---VCT 66

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           +G GSFG+V +     DG     KE+   D G   E+   QL  E+++L + +H NIV+Y
Sbjct: 8   IGKGSFGTVRKVRRKSDGKILVWKEI---DYGNMTEKEKQQLVSEVNILRELKHPNIVRY 64

Query: 257 F 257
           +
Sbjct: 65  Y 65

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 44.8 bits (107), Expect = 1e-05
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 8/72 (11%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           +G GSFG VY      DG  + +KE+ L +     E+       E+ +L +  H NI++Y
Sbjct: 8   IGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS---EKEREDALNEVKILKKLNHPNIIKY 64

Query: 257 FGT----EKVCI 264
           + +     K+CI
Sbjct: 65  YESFEEKGKLCI 76

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 43.3 bits (102), Expect = 5e-05
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 14/89 (15%)

Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQ 233
           L Y +  +E   R +        LG G++G VY           A+KE+  +D      +
Sbjct: 1   LEYEYEYDENGERVV--------LGKGTYGIVYAARDLSTQVRIAIKEIPERD-----SR 47

Query: 234 SVLQLEQEISLLGQFEHDNIVQYFGTEKV 262
            V  L +EI+L    +H NIVQY G++  
Sbjct: 48  YVQPLHEEIALHSYLKHRNIVQYLGSDSE 76

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 43.3 bits (103), Expect = 5e-05
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 193 QKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
           ++   LG GS G VY+      G  +A+K++ +       +Q    L +E+  L   E  
Sbjct: 4   ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQ----LLRELKTLRSCESP 59

Query: 252 NIVQYFG 258
            +V+ +G
Sbjct: 60  YVVKCYG 66

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 5/64 (7%)

Query: 198 LGSGSFGSVYEG---FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
           LG G FG V         D     V   SL   G   EQ     E+EI +L   +H+NIV
Sbjct: 12  LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSG--EEQHRSDFEREIEILRTLDHENIV 69

Query: 255 QYFG 258
           +Y G
Sbjct: 70  KYKG 73

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           +G GSFG VY+          A+K + L++     E  +  ++QEI  L Q     I +Y
Sbjct: 9   IGKGSFGEVYKAIDKRTNQVVAIKVIDLEE----AEDEIEDIQQEIQFLSQCRSPYITKY 64

Query: 257 FGT 259
           +G+
Sbjct: 65  YGS 67

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 198 LGSGSFGSVYE-GFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG GS+GSVY+     D  F+A+KEV L     +  +  +    EI +L    H NI+ Y
Sbjct: 8   LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAV---NEIRILASVNHPNIISY 64

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 198 LGSGSFGS-VYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG G+FG       T+D      KEV+L     +  +  L    EI +L   +H NI+ Y
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALN---EIVILSLLQHPNIIAY 64

Query: 257 FG 258
           + 
Sbjct: 65  YN 66

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 11/70 (15%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKE--VSLQDQGTQGEQSVLQLEQEISLLGQ- 247
           +++ A +G G++G+VY+    + G F A+K+  V L ++G     S L   +EI+LL Q 
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGI--PLSTL---REIALLKQL 55

Query: 248 --FEHDNIVQ 255
             FEH NIV+
Sbjct: 56  ESFEHPNIVR 65

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 14/74 (18%)

Query: 198 LGSGSFGSVYEGFTDDGFF-------FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           LGSG+FG VYEG   D           AVK  +L+   T  E+   +  +E  L+  F H
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVK--TLRKGATDQEKK--EFLKEAHLMSNFNH 58

Query: 251 DNIVQYFGTEKVCI 264
            NIV+  G   VC+
Sbjct: 59  PNIVKLLG---VCL 69

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +QK   +G G++G VY+      G   A+K++ L+ + ++G        +EI LL +  H
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPK--TALREIKLLKELNH 57

Query: 251 DNIVQ 255
            NI++
Sbjct: 58  PNIIK 62

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           +G GSFG V++     D   +A+K++ L     +  +  +    E  +L + +   I++Y
Sbjct: 8   IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAI---DEARVLAKLDSSYIIRY 64

Query: 257 F 257
           +
Sbjct: 65  Y 65

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 191 SWQKGAPLGSGSFGSVYEGFTD-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
           +++K   LG GS+ +VY+G +   G   A+KE+ L+      E +     +E SLL   +
Sbjct: 6   TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLE----HEEGAPFTAIREASLLKDLK 61

Query: 250 HDNIV 254
           H NIV
Sbjct: 62  HANIV 66

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 13/71 (18%)

Query: 198 LGSGSFGSV----YEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
           LG G+FGSV    Y+   D+ G   AVK+  LQ       + +   E+EI +L   +HDN
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKK--LQHST---AEHLRDFEREIEILKSLQHDN 66

Query: 253 IVQYFGTEKVC 263
           IV+Y G   VC
Sbjct: 67  IVKYKG---VC 74

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           +G G+FG VY+G        AVK            + +    QE  +L Q++H NIV+  
Sbjct: 3   IGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFL----QEAEILKQYDHPNIVKLI 58

Query: 258 G 258
           G
Sbjct: 59  G 59

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 6/62 (9%)

Query: 197 PLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
           PLG GS G V+    +D     AVK++ L D      QSV    +EI ++ + +HDNIV+
Sbjct: 12  PLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-----QSVKHALREIKIIRRLDHDNIVK 66

Query: 256 YF 257
            +
Sbjct: 67  VY 68

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 10/72 (13%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
            +K   +G G+ G VY+      G   A+K++ L+ Q  +       +  EI ++   +H
Sbjct: 24  LEK---IGEGASGEVYKATDRATGKEVAIKKMRLRKQNKEL------IINEILIMKDCKH 74

Query: 251 DNIVQYFGTEKV 262
            NIV Y+ +  V
Sbjct: 75  PNIVDYYDSYLV 86

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 197 PLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQ-GTQGEQSVLQLEQEISLLGQFEHDNIV 254
            +G G F  VY+     DG   A+K+V + +    +  Q  L+   EI LL Q +H N++
Sbjct: 9   KIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLK---EIDLLKQLDHPNVI 65

Query: 255 QYF 257
           +Y 
Sbjct: 66  KYL 68

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 6/63 (9%)

Query: 198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           +GSG++G VY+      G   AVK + L+     G+   L ++QEI ++ + +H NIV Y
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIKLE----PGDDFSL-IQQEIFMVKECKHCNIVAY 71

Query: 257 FGT 259
           FG+
Sbjct: 72  FGS 74

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	264
PF12515	47	CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d	99.8
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.29
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.12
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.06
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.03
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.01
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	98.98
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	98.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	98.96
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	98.93
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	98.92
KOG0192	362	consensus Tyrosine kinase specific for activated (	98.91
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.86
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	98.85
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	98.82
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.81
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	98.81
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.8
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	98.78
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.78
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	98.77
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.75
KOG0581	364	consensus Mitogen-activated protein kinase kinase	98.73
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.68
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.68
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.67
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.66
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.65
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.65
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	98.63
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.63
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.62
KOG0586	596	consensus Serine/threonine protein kinase [General	98.62
KOG0605	550	consensus NDR and related serine/threonine kinases	98.62
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.62
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.61
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.61
KOG0611	668	consensus Predicted serine/threonine protein kinas	98.61
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.6
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.6
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.6
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.59
KOG0198	313	consensus MEKK and related serine/threonine protei	98.59
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.59
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.59
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	98.59
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.58
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.58
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.58
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	98.58
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.57
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	98.57
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.57
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.57
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	98.57
PHA03212	391	serine/threonine kinase US3; Provisional	98.57
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.57
KOG0582	516	consensus Ste20-like serine/threonine protein kina	98.56
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.56
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.56
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	98.56
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.56
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.56
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.55
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.55
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	98.55
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.54
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.54
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.54
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.54
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.54
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.53
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.52
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	98.52
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.52
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.52
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.52
PRK09188	365	serine/threonine protein kinase; Provisional	98.51
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.51
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.5
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	98.5
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.49
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	98.49
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.49
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.48
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.48
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	98.47
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.47
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.47
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.47
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.46
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	98.46
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.46
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.46
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.46
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.45
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.45
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.45
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.44
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.44
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.44
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.44
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.44
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.44
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.44
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.44
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.44
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.43
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.43
PTZ00036	440	glycogen synthase kinase; Provisional	98.43
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.43
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.43
KOG0589	426	consensus Serine/threonine protein kinase [General	98.43
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.43
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.43
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.42
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.42
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.42
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.42
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.42
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.42
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.42
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.42
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.41
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.41
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.41
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.41
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.4
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.4
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.4
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.4
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.4
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.39
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.39
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.39
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	98.39
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.39
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.39
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.39
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.38
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.38
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.38
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.38
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.38
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.38
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.38
PLN00009	294	cyclin-dependent kinase A; Provisional	98.38
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.38
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.38
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.37
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.37
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.37
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.37
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.36
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.36
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.36
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.36
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.36
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	98.36
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.36
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.36
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.36
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.36
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.36
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.35
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.35
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.35
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.35
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.35
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.35
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.35
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.35
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.35
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.35
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.34
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.34
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.34
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.34
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.34
PHA02988	283	hypothetical protein; Provisional	98.34
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.34
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.33
PHA03211	461	serine/threonine kinase US3; Provisional	98.33
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.33
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.33
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.33
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.32
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.32
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.32
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.32
PTZ00283	496	serine/threonine protein kinase; Provisional	98.32
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.32
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.32
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.32
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.32
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.32
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.31
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.31
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.31
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.31
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.31
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.31
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.31
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.31
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.31
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.3
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.3
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.3
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.3
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.3
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.3
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.3
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.3
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.3
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.3
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.29
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.29
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.29
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.29
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.29
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.29
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.29
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.29
PHA03209	357	serine/threonine kinase US3; Provisional	98.28
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.28
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.28
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.28
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.28
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.28
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.28
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.28
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.28
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.28
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.28
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.28
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.27
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.27
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.27
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.27
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.27
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.27
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.27
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.27
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.26
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.26
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.26
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.26
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.25
KOG1152	772	consensus Signal transduction serine/threonine kin	98.25
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.25
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.25
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.25
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.25
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.25
KOG0584	632	consensus Serine/threonine protein kinase [General	98.24
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.24
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.24
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.24
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.23
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.23
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.23
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.23
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.23
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.22
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.22
PTZ00267	478	NIMA-related protein kinase; Provisional	98.22
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.22
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.21
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.21
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.21
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.21
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.21
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.21
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.2
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.19
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.19
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.18
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.18
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.18
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.17
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.17
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.17
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.17
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.17
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.17
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.17
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.16
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.15
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.15
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.15
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.15
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.15
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.15
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.14
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.14
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.14
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.14
PHA03207	392	serine/threonine kinase US3; Provisional	98.14
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.14
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.13
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.12
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.12
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.11
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.11
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.11
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.1
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.1
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.1
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.1
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.1
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.1
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.09
PHA03210	501	serine/threonine kinase US3; Provisional	98.09
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.09
KOG0610	459	consensus Putative serine/threonine protein kinase	98.09
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.09
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.09
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.09
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.09
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.09
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.08
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.08
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.08
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.07
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.07
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.06
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.06
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.06
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.06
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.06
PTZ00284	467	protein kinase; Provisional	98.06
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.05
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.05
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.05
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.05
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.05
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.04
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.04
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.04
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.03
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.03
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.03
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.02
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.02
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.02
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.02
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.01
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.01
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.01
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.01
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	97.99
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	97.99
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	97.99
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	97.97
KOG3653	534	consensus Transforming growth factor beta/activin	97.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	97.96
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	97.96
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	97.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.95
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	97.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	97.94
PRK10345	210	hypothetical protein; Provisional	97.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	97.92
KOG0607	463	consensus MAP kinase-interacting kinase and relate	97.92
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	97.9
KOG0578	550	consensus p21-activated serine/threonine protein k	97.89
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	97.86
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	97.82
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.82
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	97.78
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	97.7
KOG4721	904	consensus Serine/threonine protein kinase, contain	97.69
PHA02882	294	putative serine/threonine kinase; Provisional	97.66
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	97.62
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	97.57
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.55
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	97.52
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	97.52
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	97.48
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.46
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.45
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.45
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.4
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.39
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.31
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.3
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.22
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.19
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.0
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	96.96
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	96.94
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	96.91
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	96.88
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	96.86
smart00090	237	RIO RIO-like kinase.	96.85
PRK14879	211	serine/threonine protein kinase; Provisional	96.75
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	96.66
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	96.57
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.5
KOG1167	418	consensus Serine/threonine protein kinase of the C	96.49
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	96.45
KOG0695	593	consensus Serine/threonine protein kinase [Signal	96.38
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	96.32
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	96.26
PRK12274	218	serine/threonine protein kinase; Provisional	96.15
PRK09605	535	bifunctional UGMP family protein/serine/threonine	95.98
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	95.9
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	95.73
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	95.52
KOG0696	683	consensus Serine/threonine protein kinase [Signal	95.44
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	95.4
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	95.32
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	95.25
COG0515	384	SPS1 Serine/threonine protein kinase [General func	95.12
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	95.05
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	95.02
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	94.72
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	94.01
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	94.0
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	93.87
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	93.74
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	93.72
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	93.24
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	93.21
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	91.67
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	90.93
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	87.38
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	87.08
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	85.69
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	84.03
COG0661	517	AarF Predicted unusual protein kinase [General fun	83.52
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	82.52

>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []

Probab=99.80  E-value=1.8e-20  Score=116.85  Aligned_cols=46  Identities=46%  Similarity=0.885  Sum_probs=42.6

Q ss_pred             cCCCCCcccCCCCCCHHHHHHHHhhhhhhccccccchhccccccccH
Q 024683            4 FFNLKDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSE   50 (264)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~rwr~a~~~~~~~~r~~~~~~~l~~~~~   50 (264)
                      |+. ++|+|++||+|+|+|+|||+|++||+|++|||||++||+|+++
T Consensus         1 yl~-~~Fdi~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e   46 (47)
T PF12515_consen    1 YLD-DNFDIPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE   46 (47)
T ss_pred             CCc-cccCCCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence            453 8999999999999999999998899999999999999998764

This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.29  E-value=7.3e-12  Score=114.16  Aligned_cols=81  Identities=26%  Similarity=0.470  Sum_probs=69.2

Q ss_pred             ccccCchHHHHHhcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCcee
Q 024683          176 VYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ  255 (264)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~  255 (264)
                      ....++..++..++++|.....||+|+||.||+|...+|..||||.+....    ... ..+|.+|+.+|.+++|||+|+
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~----~~~-~~eF~~Ei~~ls~l~H~Nlv~  135 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNS----GQG-EREFLNEVEILSRLRHPNLVK  135 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCC----Ccc-hhHHHHHHHHHhcCCCcCccc
Confidence            445577888999999999999999999999999999667899999887522    111 456999999999999999999


Q ss_pred             eeeeee
Q 024683          256 YFGTEK  261 (264)
Q Consensus       256 l~g~~~  261 (264)
                      |+|+|.
T Consensus       136 LlGyC~  141 (361)
T KOG1187|consen  136 LLGYCL  141 (361)
T ss_pred             EEEEEe
Confidence            999985

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.12  E-value=1.5e-10  Score=103.89  Aligned_cols=69  Identities=29%  Similarity=0.445  Sum_probs=60.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|.....||.|+||+||+|.+ .++..||||.+.+...   .......+..|+.+|+.++|||||.|++++
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l---~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~   78 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL---NKKLVELLLSEIKILKELKHPNIVRLLDCI   78 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc---CHHHHHHHHHHHHHHHhcCCcceeeEEEEE
Confidence            46788899999999999999999 7889999999986322   456677789999999999999999999983

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.06  E-value=1.2e-10  Score=106.88  Aligned_cols=68  Identities=26%  Similarity=0.472  Sum_probs=59.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+.|+....||+|.||.||++.+ .+|..||+|.+.....   .........+||.||++|+|||||+|.+.
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~---~~~~~~t~~REI~ILr~l~HpNIikL~ei  184 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE---KEGFPITAIREIKILRRLDHPNIIKLEEI  184 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC---CCcchHHHHHHHHHHHhcCCCcccceeeE
Confidence            45688899999999999999999 8999999999997543   34556778899999999999999999886

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.03  E-value=4.4e-10  Score=105.27  Aligned_cols=68  Identities=29%  Similarity=0.441  Sum_probs=60.7

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..|..+++||+|||+.||.+.+ .+|..||+|++.+...  ........+.+||+|.+.|.|||||+++++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l--~k~~~reKv~~EIeIHr~L~HpnIV~f~~~   86 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL--KKPKQREKVLNEIEIHRSLKHPNIVQFYHF   86 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHh--cCcchHHHHHHHHHHHHhcCCCcEEeeeeE
Confidence            4589999999999999999999 8999999999987443  345667889999999999999999999998

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.01  E-value=1.9e-10  Score=99.99  Aligned_cols=68  Identities=25%  Similarity=0.363  Sum_probs=57.3

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.|+...++|+|+||.||+|++ .+|+.||||.+-...   .++...+-.++||.+|+.++|||+|.|+.+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese---dd~~VkKIAlREIrmLKqLkH~NLVnLiEVF   70 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE---DDPVVKKIALREIRMLKQLKHENLVNLIEVF   70 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC---ccHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence            4577788999999999999999 899999999987533   2344455678999999999999999998774

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=98.98  E-value=4.9e-10  Score=95.84  Aligned_cols=68  Identities=26%  Similarity=0.431  Sum_probs=57.6

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|...+.||+|.||.||+|.+ .+|+.||||.|.....   .........+||..|+.++||||+.|.+++
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~---kdGi~~talREIK~Lqel~h~nIi~LiD~F   70 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA---KDGINRTALREIKLLQELKHPNIIELIDVF   70 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc---ccCccHHHHHHHHHHHHccCcchhhhhhhc
Confidence            3577789999999999999999 8999999999997532   223345678999999999999999999874

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.97  E-value=1e-10  Score=98.61  Aligned_cols=74  Identities=28%  Similarity=0.445  Sum_probs=62.6

Q ss_pred             HHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          186 RRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       186 ~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..+.++|.+++.||+|.||.||.|+. .++..||+|++.+...  ...+...++.+|++|-+.|+||||+++|++++
T Consensus        18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi--~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh   92 (281)
T KOG0580|consen   18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQI--LKTQVEHQLRREIEIQSHLRHPNILRLYGYFH   92 (281)
T ss_pred             ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHH--HHhcchhhhhheeEeecccCCccHHhhhhhee
Confidence            34578999999999999999999999 7888999999987442  22344567899999999999999999999854

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.96  E-value=1.6e-10  Score=99.69  Aligned_cols=68  Identities=35%  Similarity=0.527  Sum_probs=60.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..+|.+.++||+|+||.||++.. .+|..||.|.++...+   +.+..+.+..|+.+|+.|+|||||++++.
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m---d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~   86 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM---DAKARQDCVKEISLLKQLNHPNIVQYYAH   86 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc---cHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence            45688999999999999999998 8999999999996443   67778899999999999999999999873

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=98.93  E-value=1.9e-09  Score=97.17  Aligned_cols=72  Identities=24%  Similarity=0.287  Sum_probs=59.5

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcC--hHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQG--EQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~--~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..+.|...+.||+|+||.|-+|.. .+|..||||++++.......  ......+.+|++||++|+|||||+++++
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~  244 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF  244 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee
Confidence            456788999999999999999999 89999999999976542211  1123447899999999999999999998

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=98.92  E-value=7.7e-10  Score=103.14  Aligned_cols=67  Identities=28%  Similarity=0.453  Sum_probs=59.5

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ++|.....||+|+||.||+|+. .++..||+|.+.+.+.   ..+..+.+.+|++|++.++|||||.++++
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr---~~k~l~~l~~ev~i~r~lkHpniv~m~es   69 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR---NEKELKNLRQEVRILRSLKHPNIVEMLES   69 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC---chHHHHHHHHHHHHHHhcCCcchhhHHHh
Confidence            5678889999999999999998 7889999999997553   56677889999999999999999999886

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=98.91  E-value=2.5e-09  Score=97.35  Aligned_cols=67  Identities=40%  Similarity=0.548  Sum_probs=55.0

Q ss_pred             CeeecccccccCceeEEEEEecCCCe-EEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFTDDGFF-FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~~~g~~-vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+.....||.|+||.||+|.| .|.. ||||.+.....   .......|.+|+.+|.+++|||||+++|+|.
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~-~g~~~vavK~~~~~~~---~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~  109 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKW-RGTDVVAVKIISDPDF---DDESRKAFRREASLLSRLRHPNIVQFYGACT  109 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEe-CCceeEEEEEecchhc---ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            345566699999999999999 4555 99999986443   2222779999999999999999999999974

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.86  E-value=1.5e-09  Score=95.66  Aligned_cols=70  Identities=23%  Similarity=0.347  Sum_probs=58.1

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ...+.|+.++.|++|+||.||+|.+ .++..||+|.++....   .....-..++||.+|.+++|||||.+-.+
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke---k~GFPItsLREIniLl~~~H~NIV~vkEV  143 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE---KEGFPITSLREINILLKARHPNIVEVKEV  143 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccc---cCCCcchhHHHHHHHHhcCCCCeeeeEEE
Confidence            3456789999999999999999999 8899999999986542   23334456899999999999999987654

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.85  E-value=1.2e-09  Score=105.83  Aligned_cols=71  Identities=27%  Similarity=0.382  Sum_probs=59.8

Q ss_pred             HhcCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ....+....+.||+|+||+||+|..      .....||||.++..    ...+...+|.+|+++|..++|||||+|+|+|
T Consensus       483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~----a~~~~~~dF~REaeLla~l~H~nIVrLlGVC  558 (774)
T KOG1026|consen  483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK----AENQARQDFRREAELLAELQHPNIVRLLGVC  558 (774)
T ss_pred             echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc----ccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence            3456778899999999999999986      12357999999862    3455788999999999999999999999997


Q ss_pred             e
Q 024683          261 K  261 (264)
Q Consensus       261 ~  261 (264)
                      .
T Consensus       559 ~  559 (774)
T KOG1026|consen  559 R  559 (774)
T ss_pred             c
Confidence            5

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=98.82  E-value=8.3e-09  Score=96.25  Aligned_cols=69  Identities=26%  Similarity=0.521  Sum_probs=55.7

Q ss_pred             CCeeecccccccCceeEEEEEe--cCC---CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT--DDG---FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~--~~g---~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++..+.+.||+|+||.||+|.+  ..+   ..||||......  .........+++|.++|+.++|||||++||++
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~--~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa  230 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS--ELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA  230 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccc--cccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            3456679999999999999998  322   238999988522  13567788999999999999999999999984

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.81  E-value=2.2e-09  Score=107.29  Aligned_cols=70  Identities=29%  Similarity=0.532  Sum_probs=61.0

Q ss_pred             HHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          186 RRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       186 ~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+...+|+....||+||||.||+++. -+|..+|||.|+...    .......+.+|+.+|.+|+|||||+|+.+
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~----s~~~~skI~rEVk~LArLnHpNVVRYysA  545 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA----SDKLYSKILREVKLLARLNHPNVVRYYSA  545 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch----HHHHHHHHHHHHHHHhhcCCcceeeeehh
Confidence            34577899999999999999999999 789999999998621    34556779999999999999999999876

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=98.81  E-value=5.9e-09  Score=97.84  Aligned_cols=68  Identities=29%  Similarity=0.450  Sum_probs=58.7

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+.+.++..||+|.||+||+|.| . ..||||.++....   .....+.|..||.++++.+|.||+-++|+|.
T Consensus       391 ~~ev~l~~rIGsGsFGtV~Rg~w-h-GdVAVK~Lnv~~p---t~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~  458 (678)
T KOG0193|consen  391 PEEVLLGERIGSGSFGTVYRGRW-H-GDVAVKLLNVDDP---TPEQLQAFKNEVAVLKKTRHENILLFMGACM  458 (678)
T ss_pred             HHHhhccceeccccccceeeccc-c-cceEEEEEecCCC---CHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence            45567889999999999999999 2 3699999997543   5668899999999999999999999999964

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.80  E-value=3.7e-09  Score=86.01  Aligned_cols=66  Identities=29%  Similarity=0.490  Sum_probs=57.0

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .|...++||+|.||+||++.. .++..||+|.++....   ++.......+||.+|+.+.|.|||++++.
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd---degvpssalreicllkelkhknivrl~dv   69 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD---DEGVPSSALREICLLKELKHKNIVRLHDV   69 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC---CCCCcHHHHHHHHHHHHhhhcceeehhhh
Confidence            456678999999999999998 8899999999997553   34445678999999999999999999986

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=98.78  E-value=1.8e-08  Score=94.44  Aligned_cols=68  Identities=24%  Similarity=0.312  Sum_probs=59.0

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      +...+.+.||+|.||.|..|....+..||||.++..    ........|.+|+.+|.+|+|||||.|+|+|.
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~----a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~  605 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPD----ATKNARNDFLKEIKILSRLKHPNIVELLGVCV  605 (807)
T ss_pred             hheehhhhhcCcccceeEEEEecCceEEEEeecCcc----cchhHHHHHHHHHHHHhccCCCCeeEEEeeee
Confidence            456788999999999999999866789999999863    24455689999999999999999999999974

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.78  E-value=1e-08  Score=93.95  Aligned_cols=73  Identities=21%  Similarity=0.382  Sum_probs=59.2

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCC----CcC-----hHHHHHHHHHHHHHhcCCCCCceee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQG----TQG-----EQSVLQLEQEISLLGQFEHDNIVQY  256 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~-----~~~~~~~~~Ei~iL~~l~HpNIV~l  256 (264)
                      ...+.|.+...||+|.||.|-++.. .++..||||++.+....    ...     ......+.+||.||++|+|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            3467899999999999999999999 78999999999864321    000     1123578999999999999999999


Q ss_pred             eee
Q 024683          257 FGT  259 (264)
Q Consensus       257 ~g~  259 (264)
                      +.+
T Consensus       174 iEv  176 (576)
T KOG0585|consen  174 IEV  176 (576)
T ss_pred             EEe
Confidence            987

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=98.77  E-value=7.1e-09  Score=95.77  Aligned_cols=65  Identities=25%  Similarity=0.368  Sum_probs=55.4

Q ss_pred             CeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+...+.||+|.||.||.|.|.....||+|.+...      .-....|.+|+.+|++|+|+|||+|+|+|.
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~------~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~  271 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG------SMSPEAFLREAQIMKKLRHEKLVKLYGVCT  271 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc------ccChhHHHHHHHHHHhCcccCeEEEEEEEe
Confidence            35678999999999999999965568999999863      223467889999999999999999999975

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.75  E-value=8.3e-09  Score=91.72  Aligned_cols=69  Identities=23%  Similarity=0.340  Sum_probs=60.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|.+.++||+|+||+||.... ++++.+|+|++++....  ..........|..||..++||+||.|+-+
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv--~~~e~~~~~~Er~IL~~v~hPFiv~l~ys   93 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIV--EKKEVRHTKAERNILSKIKHPFIVKLIYS   93 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhh--hhhhHHHHHHHHHHHHhCCCCcEeeeEEe
Confidence            67899999999999999999998 89999999999975542  33567789999999999999999999766

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=98.73  E-value=3e-08  Score=88.31  Aligned_cols=68  Identities=25%  Similarity=0.348  Sum_probs=60.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++...+.||+|..|+||++.+ .++..+|+|.|...    ......+++.+|+++++.++||+||.+||++.
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~----~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~  147 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN----IDPALQKQILRELEILRSCQSPYIVGFYGAFY  147 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc----CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence            4567789999999999999999 88999999999652    35677789999999999999999999999964

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.68  E-value=7.1e-09  Score=98.80  Aligned_cols=65  Identities=32%  Similarity=0.588  Sum_probs=56.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .|.....||+|+||.||+|.+ .+|..||||.++...    .......+.+|+++|++++|||||+++++
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~----~~r~~e~~~~EieilkKLnh~NIVk~f~i   79 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES----SLRPRERWCREIEILKKLNHPNIVKLFDI   79 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhc----ccchHHHHHHHHHHHHHcCchhhhhhccc
Confidence            456778999999999999998 899999999998632    34456778999999999999999999987

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.68  E-value=4.2e-08  Score=88.95  Aligned_cols=69  Identities=19%  Similarity=0.329  Sum_probs=57.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||.|+||.||+|.+ .+|..||||++.....  ........+.+|+.+|..++||||+++++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~   70 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LEKEQVAHVRAERDILAEADNPWVVKLYYSF   70 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence            3688999999999999999999 7889999999985321  1233456688999999999999999998873

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.67  E-value=6.1e-08  Score=88.76  Aligned_cols=68  Identities=22%  Similarity=0.360  Sum_probs=57.3

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.+|..++|||||++++++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~   70 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LNRNQVAHVKAERDILAEADNEWVVKLYYSF   70 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE
Confidence            578899999999999999999 7889999999975321  1234456789999999999999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.66  E-value=2.3e-08  Score=88.46  Aligned_cols=70  Identities=31%  Similarity=0.507  Sum_probs=58.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCC-ceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN-IVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN-IV~l~g~~~  261 (264)
                      ...|...++||+|+||.||+|.. .+|..||+|+++.....   +.......+|+.+|+.++|+| ||.|+++++
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~---EG~P~taiREisllk~L~~~~~iv~L~dv~~   81 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE---EGVPSTAIREISLLKRLSHANHIVRLHDVIH   81 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc---cCCCchhhHHHHHHHHhCCCcceEEEEeeee
Confidence            34567788899999999999999 88999999999975431   224456789999999999999 999999865

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.65  E-value=7.5e-08  Score=84.50  Aligned_cols=67  Identities=28%  Similarity=0.453  Sum_probs=56.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||.|+||.||+|.. .++..||+|.+....    .......+.+|+.++..++||||++++++
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~   71 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH----EEGAPCTAIREVSLLKNLKHANIVTLHDI   71 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc----cCCcchhHHHHHHHHHhCCCCCEeeEEEE
Confidence            46789999999999999999998 788999999997532    12223467899999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.65  E-value=6.6e-08  Score=86.74  Aligned_cols=70  Identities=27%  Similarity=0.411  Sum_probs=58.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....  ........+.+|+.+|..++|||||++++++
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   87 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREI--LKMKQVQHVAQEKSILMELSHPFIVNMMCSF   87 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            56789999999999999999999 7789999999975321  1223456788999999999999999999873

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=98.63  E-value=3.2e-08  Score=95.93  Aligned_cols=91  Identities=31%  Similarity=0.400  Sum_probs=76.4

Q ss_pred             CCcccCCCCCCHHHHHHHHhhhhhhccccccchhccccccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHccCCCCCCCC
Q 024683            8 KDFDVKPKHPSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRL-ALCIRDTLKLIESHEDVPIGDT   86 (264)
Q Consensus         8 ~~~~~~~~~~~~~~~~rwr~a~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~a~~~~~~~~~   86 (264)
                      ++|....+|++.++++|||.|+ .++|++|||||+++|++..+...+|+    ++|+ +...+|+.+|++++...    .
T Consensus         5 ~~~~~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~~~~----e   75 (1034)
T KOG0204|consen    5 KDFVVSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAGSRT----E   75 (1034)
T ss_pred             cccccccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhcccccc----c
Confidence            6787788899999999999886 99999999999999999998888765    7776 55999999999996321    1


Q ss_pred             CCCCcccChhhHhhhccCCchHH
Q 024683           87 DAGRFQEFVDDIISTVKCGDVKE  109 (264)
Q Consensus        87 ~~~~f~i~~e~L~~~~~~~~~~~  109 (264)
                      +..  +|++|+|..|++++|++.
T Consensus        76 ~~~--~i~~e~l~~i~~~~~~~~   96 (1034)
T KOG0204|consen   76 YTL--GIGAEELVKIVKEHDLKA   96 (1034)
T ss_pred             ccc--ccCHHHHHHHhhccchhh
Confidence            111  789999999999999763

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.63  E-value=9.6e-08  Score=85.36  Aligned_cols=67  Identities=22%  Similarity=0.314  Sum_probs=55.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||+|.+ .+|..||||.+.....   .......+.+|+.+|..++||||+++++++
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   68 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE---HVSDATRILREIKLLRLLRHPDIVEIKHIM   68 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc---cchhHHHHHHHHHHHHhCCCCCEeeecceE
Confidence            478889999999999999998 7889999999874221   223345688999999999999999998864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.62  E-value=4.9e-08  Score=85.86  Aligned_cols=68  Identities=19%  Similarity=0.289  Sum_probs=56.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ++|...+.||+|+||.||++.+ .+|..||+|.+.....  ........+.+|+.+|..++||||+++++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   69 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEV--IRLKQEQHVHNEKRVLKEVSHPFIIRLFWT   69 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHH--hhhHHHHHHHHHHHHHHhCCCCcHhhhHhh
Confidence            3688899999999999999999 6789999999975221  122345678899999999999999998876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.62  E-value=8.1e-08  Score=90.35  Aligned_cols=68  Identities=21%  Similarity=0.294  Sum_probs=59.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ...|.+.+.||+|.|+.|..+.+ .+|..||||.|.+...   .......+.+|+.+|..++|||||+++.+
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l---n~~~~~k~~rev~imk~l~HPnIvkl~~v  123 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL---NPSKRQKLGREVDIMKSLNHPNIVKLFSV  123 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc---ChHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence            56799999999999999999999 8899999999987432   44455669999999999999999999987

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=98.62  E-value=4.7e-08  Score=90.66  Aligned_cols=70  Identities=19%  Similarity=0.318  Sum_probs=62.5

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..++|..++.||+|+||.||+|.- .+|..+|+|+|++..+  ....++..+..|-.||...++|+||+|+-+
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M--~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs  209 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEM--LKKNQVEHVRAERDILAEVDSPWVVKLYYS  209 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHH--HhhhhHHHHHHHHHHhhhcCCCcEEEEEEE
Confidence            468899999999999999999998 8999999999998654  345667889999999999999999999876

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.62  E-value=1.1e-07  Score=87.45  Aligned_cols=70  Identities=29%  Similarity=0.399  Sum_probs=60.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      ...|.+.+.||.|.||.||.|.. .+|..+|+|.+.+....  .......+.+|+.+|..+. |||||.+++++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~--~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~  105 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLR--GKEDREDVRREVAILQQLSGHPNIVQLKDAF  105 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcc--ccccHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            45789999999999999999999 77999999999875432  2335578999999999998 99999999883

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.61  E-value=2e-07  Score=80.41  Aligned_cols=71  Identities=39%  Similarity=0.676  Sum_probs=58.3

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||.|.+ .+|..||+|.+...............+.+|+.++..++||||+++++++
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   73 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCL   73 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEe
Confidence            5788999999999999999998 7789999999875322112334567889999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.61  E-value=1.1e-07  Score=84.62  Aligned_cols=68  Identities=24%  Similarity=0.419  Sum_probs=55.7

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCC----eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGF----FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|...+.||+|+||.||+|.+ .+|.    .||+|.+...    ........+..|+.++..++||||++++|+|.
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~   79 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----TSPKANKEILDEAYVMASVDNPHVCRLLGICL   79 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEc
Confidence            4689999999999999999987 4444    3899998742    23445567899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=98.61  E-value=1.6e-08  Score=91.31  Aligned_cols=68  Identities=22%  Similarity=0.493  Sum_probs=60.4

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..|++.+.||+|.||.|-++.. ..|..||||.|++...  .+.+..-.+.+||+||+.|+||||+.+|.+
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkI--kdeqDlvhIRREIeIMSsLNHPhII~IyEV  121 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKI--KDEQDLVHIRREIEIMSSLNHPHIIQIYEV  121 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhc--ccHHHHHHHHHHHHHHhhcCCCceeehhhh
Confidence            4688899999999999999988 7899999999998654  356777889999999999999999999876

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.60  E-value=1.1e-07  Score=86.95  Aligned_cols=69  Identities=17%  Similarity=0.274  Sum_probs=56.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||.|+||.||++.. .+|..||||++.....  ........+.+|+.+|..++|||||++++++
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~   70 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--FKKDQLAHVKAERDVLAESDSPWVVSLYYSF   70 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            3688899999999999999998 7889999999875221  1233456788999999999999999999873

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.60  E-value=9.7e-08  Score=86.41  Aligned_cols=68  Identities=24%  Similarity=0.369  Sum_probs=57.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .+|..||||.+...    ........+.+|+.+|..++|||||++++++
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  141 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGN----HEDTVRRQICREIEILRDVNHPNVVKCHDMF  141 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecC----CcHHHHHHHHHHHHHHHhCCCCCcceeeeEe
Confidence            34577889999999999999998 77899999999642    1334456789999999999999999999874

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.60  E-value=1.2e-07  Score=83.66  Aligned_cols=68  Identities=34%  Similarity=0.484  Sum_probs=56.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.. .+|..||+|.+.....    ......+.+|+.+++.++||||+++++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~   72 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE----EGTPFTAIREASLLKGLKHANIVLLHDII   72 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc----cccchhHHHHHHHHhhCCCCCcCeEEEEE
Confidence            46799999999999999999999 6889999999975321    12234577899999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.59  E-value=1.1e-07  Score=84.58  Aligned_cols=61  Identities=28%  Similarity=0.450  Sum_probs=51.0

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      -.|...+++|.|+||.||+|.. .++..||||..-.+..         --.+|+.+|+.++|||||+|.-+
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---------~knrEl~im~~l~HpNIV~L~~~   85 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---------YKNRELQIMRKLDHPNIVRLLYF   85 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---------cCcHHHHHHHhcCCcCeeeEEEE
Confidence            3577889999999999999999 7788999999875322         22489999999999999998765

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.59  E-value=1.1e-07  Score=84.66  Aligned_cols=66  Identities=48%  Similarity=0.817  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..++..++.||+|+||.||.+.. .+|...|||.+....    ... .+.+.+|+.+|..++|||||+++|.
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~----~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~   82 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED----SPT-SESLEREIRILSRLNHPNIVQYYGS   82 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeeccc----chh-HHHHHHHHHHHHhCCCCCEEeeCCc
Confidence            45678899999999999999999 678999999998631    122 6678999999999999999999995

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.59  E-value=1.8e-07  Score=80.27  Aligned_cols=71  Identities=39%  Similarity=0.721  Sum_probs=58.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||.+.. .++..+|+|.+...............+.+|+.++.+++||||+++++++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   73 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL   73 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE
Confidence            4688999999999999999998 7789999999875432212233456789999999999999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.59  E-value=2e-07  Score=84.56  Aligned_cols=69  Identities=29%  Similarity=0.378  Sum_probs=58.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||++.+ .+|..||+|.+....   ........+.+|+.++..++||||+++++++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   89 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF---QNQTHAKRAYRELVLLKCVNHKNIISLLNVF   89 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc---cchhHHHHHHHHHHHHHhCCCCCEeeeeeee
Confidence            57899999999999999999998 778999999997532   1334456788999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=98.59  E-value=6.6e-08  Score=91.40  Aligned_cols=68  Identities=26%  Similarity=0.416  Sum_probs=56.0

Q ss_pred             CCeeecccccccCceeEEEEEe--c-CC--CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT--D-DG--FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~--~-~g--~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ......++||.|.||.||+|.+  . .|  ..||||..+.+.    .......|+.|..+|+.++|||||+|+|+|.
T Consensus       389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~----t~d~tekflqEa~iMrnfdHphIikLIGv~~  461 (974)
T KOG4257|consen  389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC----TPDDTEKFLQEASIMRNFDHPHIIKLIGVCV  461 (974)
T ss_pred             hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC----ChhhHHHHHHHHHHHHhCCCcchhheeeeee
Confidence            3456789999999999999998  2 23  358999988643    3445788999999999999999999999974

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.58  E-value=2.1e-07  Score=83.44  Aligned_cols=68  Identities=22%  Similarity=0.288  Sum_probs=58.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+|..+|+|.+...    ........+.+|+.+|..++||||+++++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   72 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGFYGAF   72 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecc----cCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE
Confidence            46789999999999999999999 78889999999852    1334456799999999999999999999874

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.58  E-value=1.1e-07  Score=86.72  Aligned_cols=69  Identities=19%  Similarity=0.278  Sum_probs=56.5

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||++.. .++..||+|.+.....  ........+.+|+.+|..++||||+++++.+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~   70 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV--LMRNQAAHVKAERDILAEADNEWVVKLYYSF   70 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH--HhhhhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            3688999999999999999998 7789999999975221  1223356688999999999999999998873

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.58  E-value=1.4e-07  Score=86.21  Aligned_cols=68  Identities=22%  Similarity=0.326  Sum_probs=57.0

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||+|.. .++..||+|.+.....  ........+.+|+.+|..++|||||++++.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~   70 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV--LLRNQVAHVKAERDILAEADNEWVVRLYYSF   70 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh--hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE
Confidence            578899999999999999998 7889999999975221  1234456788999999999999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=98.58  E-value=1.2e-07  Score=87.65  Aligned_cols=69  Identities=29%  Similarity=0.333  Sum_probs=55.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC-----CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD-----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~-----g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~~  261 (264)
                      .+.|.+++.||+|+||.||+|.+ ..     +..||||.+...    ........+.+|+.+|..+. |||||+++|+|.
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~----~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~  111 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT----ARSSEKQALMSELKIMTHLGPHLNIVNLLGACT  111 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC----CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence            56789999999999999999986 21     346999999752    13344567999999999996 999999999853

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.57  E-value=9.3e-08  Score=88.91  Aligned_cols=63  Identities=32%  Similarity=0.411  Sum_probs=54.4

Q ss_pred             ecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          194 KGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       194 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..++||+|.||+||-|.+ .+|+.||||+|.+.+..   .+....+..|+.||..++||.||.|-..
T Consensus       568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp---~kqesqlR~EVaILq~l~HPGiV~le~M  631 (888)
T KOG4236|consen  568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFP---TKQESQLRNEVAILQNLHHPGIVNLECM  631 (888)
T ss_pred             hHhhccCCcceeeecceecccCceeeeeeeecccCC---CchHHHHHHHHHHHHhcCCCCeeEEEEe
Confidence            357899999999999999 89999999999986653   3334788999999999999999998765

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=98.57  E-value=1.3e-07  Score=94.89  Aligned_cols=68  Identities=35%  Similarity=0.446  Sum_probs=57.4

Q ss_pred             CCeeecccccccCceeEEEEEe--cCCC----eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT--DDGF----FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~--~~g~----~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ........||+|+||.||.|..  ..|.    .||||.+...    ...+....|++|..+|+.++|||||+++|+|.
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~----~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l  765 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL----SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL  765 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc----CCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence            4567889999999999999998  3332    4899998862    35778889999999999999999999999974

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.57  E-value=1.2e-07  Score=86.39  Aligned_cols=67  Identities=27%  Similarity=0.375  Sum_probs=55.7

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|+..+.||+|+||.||++.+ .+|..||+|.+....   ........+.+|+.+|..++||||+++++++
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   68 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF---QNLVSCKRVFRELKMLCFFKHDNVLSALDIL   68 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc---cchHHHHHHHHHHHHHHhCCCCCcCCHhhee
Confidence            467889999999999999998 788999999986421   1233456788999999999999999998874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.57  E-value=1.3e-07  Score=82.46  Aligned_cols=68  Identities=18%  Similarity=0.266  Sum_probs=56.8

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .++..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   69 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE---NEEVKETTLRELKMLRTLKQENIVELKEAF   69 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc---cccchhhHHHHHHHHHhCCCccccchhhhE
Confidence            3688899999999999999999 7788999999975322   233456788999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=98.57  E-value=2.1e-07  Score=82.17  Aligned_cols=68  Identities=21%  Similarity=0.287  Sum_probs=54.7

Q ss_pred             CCeeecccccccCceeEEEEEe-c----------------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCC
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-D----------------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN  252 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~----------------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN  252 (264)
                      .+|...+.||+|+||.||+|.+ .                ++..||+|.+...    ........+.+|+.+|..++|||
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~n   80 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD----ANKNARNDFLKEVKILSRLKDPN   80 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC----CCHHHHHHHHHHHHHHhhcCCCC
Confidence            4678899999999999999975 1                2346999998752    13344567999999999999999


Q ss_pred             ceeeeeeee
Q 024683          253 IVQYFGTEK  261 (264)
Q Consensus       253 IV~l~g~~~  261 (264)
                      |+++++++.
T Consensus        81 iv~~~~~~~   89 (304)
T cd05096          81 IIRLLGVCV   89 (304)
T ss_pred             eeEEEEEEe
Confidence            999999753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.57  E-value=1.3e-07  Score=87.28  Aligned_cols=61  Identities=16%  Similarity=0.139  Sum_probs=53.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||++.+ .++..||+|....           ..+.+|+.+|..++|||||++++++
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----------~~~~~E~~il~~l~HpnIv~~~~~~  152 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----------GGTATEAHILRAINHPSIIQLKGTF  152 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----------hhhHHHHHHHHhCCCCCCCCEeEEE
Confidence            35799999999999999999999 7889999997542           2467899999999999999999873

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.57  E-value=2.2e-07  Score=83.56  Aligned_cols=68  Identities=24%  Similarity=0.315  Sum_probs=58.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+|..+|+|.+....    .......+.+|+.+|..++|||||++++++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   72 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAF   72 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc----CHHHHHHHHHHHHHHHHCCCCcccceeEEE
Confidence            36789999999999999999999 678899999987521    334456789999999999999999999884

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.56  E-value=1.5e-07  Score=85.77  Aligned_cols=69  Identities=20%  Similarity=0.299  Sum_probs=60.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..+|.+...||.|..+.||+|.. ..+..||||+++.+..    ......+.+|+..|+.++|||||+++.++-
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc----~~~ld~l~kE~~~msl~~HPNIv~~~~sFv   94 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKC----NNDLDALRKEVQTMSLIDHPNIVTYHCSFV   94 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhh----hhhHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence            56899999999999999999999 8889999999998543    334788999999999999999999988743

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.56  E-value=1.9e-07  Score=82.64  Aligned_cols=68  Identities=28%  Similarity=0.448  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .++..||+|.+.....    ......+.+|+.++..++||||+++++++
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   73 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE----EGAPCTAIREVSLLKDLKHANIVTLHDIV   73 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc----CCcchhHHHHHHHHHhCCCCCcceEEEEE
Confidence            46789999999999999999998 6788999999975321    22234577899999999999999999984

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.56  E-value=1.7e-07  Score=84.00  Aligned_cols=68  Identities=19%  Similarity=0.223  Sum_probs=56.6

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|.+.+.||+|+||.||+|.+ .+|..||+|++.....  ........+..|+.+|..++||||+++++++
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~   70 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL--FKLNEVRHVLTERDILTTTKSEWLVKLLYAF   70 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence            688999999999999999999 7789999999985321  1223456788999999999999999998773

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=98.56  E-value=1.1e-07  Score=86.99  Aligned_cols=69  Identities=29%  Similarity=0.359  Sum_probs=55.4

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+      .++..||||.+....    .......+.+|+.+|..+ +|||||+++|+|.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~  109 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA----HLTEREALMSELKVLSYLGNHINIVNLLGACT  109 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc----CcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence            34689999999999999999974      345689999987422    233456788999999999 8999999999853

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.56  E-value=8.5e-08  Score=86.02  Aligned_cols=68  Identities=26%  Similarity=0.298  Sum_probs=55.1

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+      ..+..||+|.+...    ........+.+|+.+|..+ +|||||+++++|
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG----ATASEHKALMSELKILIHIGNHLNVVNLLGAC   80 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc----cchHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence            35788999999999999999974      23467999998742    1334456789999999999 899999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.56  E-value=3.4e-07  Score=79.08  Aligned_cols=71  Identities=38%  Similarity=0.723  Sum_probs=58.0

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||++.. .++..||+|.+...............+.+|+.++..++||||+++++.+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   73 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCL   73 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEE
Confidence            4688899999999999999998 7789999999875432222334556789999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.55  E-value=3.3e-07  Score=79.85  Aligned_cols=67  Identities=24%  Similarity=0.321  Sum_probs=56.3

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      +|+..+.||+|+||.||+|.+ .++..||+|.+....    .......+.+|+.++..++||||+++++.+.
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   69 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI----TVELQKQIMSELEILYKCDSPYIIGFYGAFF   69 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC----ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE
Confidence            567888999999999999998 788999999987521    2334567899999999999999999999743

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.55  E-value=2.2e-07  Score=81.39  Aligned_cols=68  Identities=18%  Similarity=0.215  Sum_probs=54.9

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||++.+ .+|..||+|.+......  .......+.+|+.+|..++||||+.+++++
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~iv~~~~~~   69 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK--KRKGEAMALNEKRILEKVNSRFVVSLAYAY   69 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh--hhhhHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence            367889999999999999998 78999999998753221  122334678999999999999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=98.55  E-value=3.8e-08  Score=92.98  Aligned_cols=66  Identities=27%  Similarity=0.431  Sum_probs=58.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++....+||-|.||.||.|.| .....||||.++.      +.-...+|+.|..+|+.+.|||+|+|+|+|.
T Consensus       267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE------DtMeveEFLkEAAvMKeikHpNLVqLLGVCT  333 (1157)
T KOG4278|consen  267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT  333 (1157)
T ss_pred             hheeeeeccCCCcccceeeeeeeccceeeehhhhhh------cchhHHHHHHHHHHHHhhcCccHHHHhhhhc
Confidence            3566788999999999999999 6778899999985      3445689999999999999999999999975

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.54  E-value=2.7e-07  Score=83.28  Aligned_cols=76  Identities=28%  Similarity=0.407  Sum_probs=61.8

Q ss_pred             hHHHHHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          182 NEKYRRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       182 ~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...+....++|...+.||+|+||.||++.. .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~   85 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ---SIIHAKRTYRELRLLKHMKHENVIGLLDVF   85 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch---hhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence            344556678999999999999999999988 7889999999875221   223345678999999999999999998874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.54  E-value=3.5e-07  Score=78.76  Aligned_cols=69  Identities=26%  Similarity=0.409  Sum_probs=57.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||+|.+ .++..||||.+.....  ........+.+|+.+++.++||||+++++.+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM--MDAKARQDCVKEIDLLKQLNHPNVIKYLDSF   71 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc--CCHHHHHHHHHHHHHHHhCCCcceeeeeeeE
Confidence            5788999999999999999998 7889999998875322  2344556789999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.54  E-value=2.2e-07  Score=81.40  Aligned_cols=68  Identities=18%  Similarity=0.230  Sum_probs=54.7

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||++.+ .++..||+|.+.....  ........+.+|+.++..++||||+.+++.+
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   69 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGEAMALNEKQILEKVNSRFVVSLAYAY   69 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhh--hhhhhHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            377889999999999999998 7789999999975321  1122345578899999999999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.54  E-value=1.9e-07  Score=84.95  Aligned_cols=69  Identities=22%  Similarity=0.276  Sum_probs=56.7

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.. .++..||+|++.....  ........+..|+.++..++||||+++++.+
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~   70 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM--LEKEQVGHIRAERDILVEADSLWVVKMFYSF   70 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhhHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            4688999999999999999998 7789999999975221  1233446788999999999999999998873

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.54  E-value=1.3e-07  Score=85.11  Aligned_cols=70  Identities=26%  Similarity=0.334  Sum_probs=57.4

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+.|...+.||.|+||.||+|.+ .++..||||.+....   ........+.+|+.+|..++||||+++++++
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   83 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF---QSLIHARRTYRELRLLKHMKHENVIGLLDVF   83 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh---hhhHHHHHHHHHHHHHHhcCCCchhhhhhhh
Confidence            356789999999999999999998 788899999987522   1223345678999999999999999998753

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.53  E-value=4.4e-07  Score=78.26  Aligned_cols=71  Identities=41%  Similarity=0.707  Sum_probs=58.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||+|.+ .+|..||+|.+...............+.+|+.++..++||||+++++.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~   73 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCL   73 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEE
Confidence            4788999999999999999998 7789999999864321112344567889999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.52  E-value=6.9e-08  Score=87.72  Aligned_cols=65  Identities=34%  Similarity=0.628  Sum_probs=57.3

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .|.....||+|+||.||+|.+ .++..||+|++..+.    .......+.+|+.+|..+++|||.++||+
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~----~~deIediqqei~~Ls~~~~~~it~yygs   79 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE----AEDEIEDIQQEISVLSQCDSPNITEYYGS   79 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhh----cchhhHHHHHHHHHHHhcCcchHHhhhhh
Confidence            466678999999999999999 889999999999743    45556789999999999999999999987

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=98.52  E-value=2.6e-07  Score=79.93  Aligned_cols=67  Identities=27%  Similarity=0.364  Sum_probs=55.1

Q ss_pred             CCeeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|.+.+.||+|+||.||+|.+    ..+..||+|.+....    .......+.+|+.++..++||||++++|++
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   75 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC----SDKQRRGFLAEALTLGQFDHSNIVRLEGVI   75 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC----CHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence            4688999999999999999976    235689999998521    234456789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.52  E-value=2.2e-07  Score=85.11  Aligned_cols=71  Identities=28%  Similarity=0.405  Sum_probs=57.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      ...|..++.||+|+||+|+.|.+ .+|..||+|.+...............+.+|+.+|+.++ ||||++++.+
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev   88 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEV   88 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEE
Confidence            56899999999999999999998 78899999977754221111134556779999999999 9999999987

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.52  E-value=3.2e-07  Score=80.83  Aligned_cols=68  Identities=29%  Similarity=0.462  Sum_probs=56.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||.|+||.||+|.+ .++..||+|.+.....    ......+.+|+.++..++||||+++++++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~nI~~~~~~~   73 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE----EGAPCTAIREVSLLKDLKHANIVTLHDII   73 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc----cCchhHHHHHHHHHHhcCCCCcceEEEEE
Confidence            46789999999999999999998 6788999999975321    22234577899999999999999999984

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.52  E-value=2.9e-07  Score=83.27  Aligned_cols=70  Identities=23%  Similarity=0.293  Sum_probs=58.7

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||++.+ ..+..||+|.+....   ........+.+|+.+++.++||||+++++++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   85 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIISLLNVF   85 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc---cChHHHHHHHHHHHHHHHhCCCchhceeeee
Confidence            467899999999999999999998 678899999987532   1334456788999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.51  E-value=2.7e-07  Score=84.18  Aligned_cols=72  Identities=19%  Similarity=0.121  Sum_probs=54.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-c-CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCce-eeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV-QYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~-~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV-~l~g~~  260 (264)
                      ...|.....||+|+||.||+|.+ . ++..+|||.+...............+.+|+.+|..++|+||| .+++..
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~   91 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATG   91 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcC
Confidence            57899999999999999999988 3 677789998763211001233456789999999999999998 455543

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.51  E-value=4.1e-07  Score=80.62  Aligned_cols=67  Identities=24%  Similarity=0.334  Sum_probs=56.6

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .+|..+|+|.+...    ........+.+|+.++..++||||+++++++
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   68 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE----IKPAIRNQIIRELKVLHECNSPYIVGFYGAF   68 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc----cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            3688999999999999999998 77889999998752    1334456788999999999999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.50  E-value=7.7e-08  Score=89.25  Aligned_cols=68  Identities=25%  Similarity=0.228  Sum_probs=59.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..-|.+.+.||+|.|+.|-++.+ -+|..||||+|.+...   +.-....+.+|+..|+-++|||||+||.+
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl---D~~st~hlfqEVRCMKLVQHpNiVRLYEV   85 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL---DTLSTGHLFQEVRCMKLVQHPNIVRLYEV   85 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc---chhhhhHHHHHHHHHHHhcCcCeeeeeeh
Confidence            34588899999999999999998 8999999999997554   33445678999999999999999999987

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=98.50  E-value=1.9e-07  Score=86.44  Aligned_cols=69  Identities=28%  Similarity=0.362  Sum_probs=54.9

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~~  261 (264)
                      .++|.+.+.||+|+||.||+|.+      ..+..||+|.+....    .......+.+|+.+|..+. |||||+++|+|.
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA----RSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC----ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            45678899999999999999986      234579999997521    2333457889999999997 999999999853

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.49  E-value=4.5e-07  Score=77.38  Aligned_cols=69  Identities=70%  Similarity=1.127  Sum_probs=56.9

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |...+.||+|+||.||+|.. .++..|++|.+...............+.+|+.++..++||||+++++.+
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   71 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE   71 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE
Confidence            56778999999999999998 5789999999876432222344567899999999999999999999874

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.49  E-value=1.1e-07  Score=90.87  Aligned_cols=65  Identities=25%  Similarity=0.300  Sum_probs=54.2

Q ss_pred             eeecccccccCceeEEEEEe--cCCC--eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT--DDGF--FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~--~~g~--~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ....+.||+|.||.|++|.|  ..|.  .||||++.....    ......|.+|+.+|.+|+|||+|+|||+-
T Consensus       112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l----~~~mddflrEas~M~~L~H~hliRLyGvV  180 (1039)
T KOG0199|consen  112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL----NAIMDDFLREASHMLKLQHPHLIRLYGVV  180 (1039)
T ss_pred             HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc----chhHHHHHHHHHHHHhccCcceeEEeeee
Confidence            35678999999999999999  3443  689999986332    22678999999999999999999999983

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.49  E-value=1.3e-07  Score=91.89  Aligned_cols=65  Identities=28%  Similarity=0.494  Sum_probs=55.0

Q ss_pred             eecccccccCceeEEEEEe-cCC----CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFT-DDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~-~~g----~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ...++||.|+||+||+|.| ..|    .+||+|++...    ...+...+++.|.-+|.+++|||+++|+|+|.
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~----t~~~~s~e~LdeAl~masldHpnl~RLLgvc~  768 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF----TSPKASIELLDEALRMASLDHPNLLRLLGVCM  768 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeecc----CCchhhHHHHHHHHHHhcCCCchHHHHhhhcc
Confidence            5578999999999999999 434    47999999852    34556678999999999999999999999875

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.48  E-value=3.9e-07  Score=78.68  Aligned_cols=69  Identities=30%  Similarity=0.486  Sum_probs=56.7

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++++.....||+|+||.||+|.+ .++..||+|.+...     .......+.+|+.++..++||||+++++++.
T Consensus         6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   75 (268)
T cd06624           6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER-----DSRYVQPLHEEIALHSYLKHRNIVQYLGSDS   75 (268)
T ss_pred             ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC-----CHHHHHHHHHHHHHHHhcCCCCeeeeeeeec
Confidence            345556667899999999999998 67889999998752     3345567899999999999999999998743

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.48  E-value=4.9e-07  Score=78.73  Aligned_cols=66  Identities=33%  Similarity=0.445  Sum_probs=55.5

Q ss_pred             CCeeecccccccCceeEEEEEe-----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||.+..     ..+..||+|.+..     ........+.+|+.++..++||||+++++++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~-----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   74 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQH-----STAEHLRDFEREIEILKSLQHDNIVKYKGVC   74 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEecc-----CCHHHHHHHHHHHHHHHhCCCCCeeEEEEEE
Confidence            4678899999999999999874     3578899999874     2344567889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=98.47  E-value=2.8e-07  Score=79.03  Aligned_cols=65  Identities=25%  Similarity=0.286  Sum_probs=53.8

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+..+..+|+|.+....      .....+..|+.+|..++||||+++++++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~   68 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA------MSEEDFIEEAKVMMKLSHPKLVQLYGVC   68 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC------ccHHHHHHHHHHHHHCCCCCceeEEEEE
Confidence            4578889999999999999988556689999887421      2235688999999999999999999884

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.47  E-value=3.2e-07  Score=82.88  Aligned_cols=70  Identities=21%  Similarity=0.216  Sum_probs=56.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC-CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~-g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .. +..||+|.+.....  ........+.+|+.+|..++|||||++++++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~  100 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI--IKQKQVDHVFSERKILNYINHPFCVNLYGSF  100 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence            56789999999999999999987 33 36899999975321  1233456788999999999999999999873

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.47  E-value=5.3e-07  Score=90.52  Aligned_cols=69  Identities=16%  Similarity=0.206  Sum_probs=58.4

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||+|.+ .+|..||+|.+.....  ........+.+|+.++..++|||||++++++
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~--~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~   71 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS--ENPLLKKRFLREAKIAADLIHPGIVPVYSIC   71 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc--cCHHHHHHHHHHHHHHHhCCCcCcCeEEEEE
Confidence            5789999999999999999998 7789999999975321  1334456799999999999999999999875

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.47  E-value=4.6e-07  Score=78.13  Aligned_cols=67  Identities=31%  Similarity=0.506  Sum_probs=56.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.. .+|..||+|.+...     .......+.+|+.++..++||||+++++++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-----~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~   75 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLE-----PGDDFSLIQQEIFMVKECKHCNIVAYFGSY   75 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecC-----ccchHHHHHHHHHHHHhcCCCCeeeeeEEE
Confidence            34688999999999999999998 77889999999752     222335678999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.46  E-value=3.5e-07  Score=83.69  Aligned_cols=69  Identities=29%  Similarity=0.407  Sum_probs=55.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-c-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||++.+ .     ++..||+|.+....    .......+.+|+.+|..+ +|||||+++++|.
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~  112 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA----HTDEREALMSELKILSHLGQHKNIVNLLGACT  112 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC----CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence            45789999999999999999885 2     23579999997522    233456788999999999 8999999999853

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=98.46  E-value=4.5e-07  Score=78.37  Aligned_cols=65  Identities=29%  Similarity=0.394  Sum_probs=53.2

Q ss_pred             eecccccccCceeEEEEEec-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFTD-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ...+.||.|.||.||+|.+.     .+..|+||.+..    .........+.+|+.++..++||||++++|+|.
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~----~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~   71 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP----SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI   71 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST----TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc----ccccccceeeeeccccccccccccccccccccc
Confidence            45678999999999999983     256899999964    124455788999999999999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.46  E-value=3.3e-07  Score=78.79  Aligned_cols=65  Identities=23%  Similarity=0.378  Sum_probs=55.1

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||+|+||.||+|....+..||+|.+....      .....+.+|+.++..++||||+++++.
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~   69 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS------MSPEAFLAEANLMKQLQHPRLVRLYAV   69 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC------CcHHHHHHHHHHHHhcCCcCeeeEEEE
Confidence            35688899999999999999988677889999987522      223578899999999999999999887

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.46  E-value=2.6e-07  Score=83.40  Aligned_cols=67  Identities=28%  Similarity=0.347  Sum_probs=54.7

Q ss_pred             CCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ++|.+.+.||+|+||.||+|.+      .++..||||.+....    .......+.+|+.+|..+ +|||||+++++|
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRALMSELKILIHIGHHLNVVNLLGAC   80 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC----ChHHHHHHHHHHHHHHhccCCccHhhhccee
Confidence            4688999999999999999974      346789999997521    234456788999999999 689999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.46  E-value=6.6e-07  Score=80.72  Aligned_cols=70  Identities=21%  Similarity=0.318  Sum_probs=57.9

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||++.+ .+|..||||.+....   ........+.+|+.+|..++||||+++++++
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   83 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF---QSELFAKRAYRELRLLKHMKHENVIGLLDVF   83 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc---cchHHHHHHHHHHHHHHhcCCCCccceeeee
Confidence            467899999999999999999998 788999999986421   1233445688999999999999999998863

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.45  E-value=6e-07  Score=77.37  Aligned_cols=66  Identities=29%  Similarity=0.455  Sum_probs=53.5

Q ss_pred             eeecccccccCceeEEEEEe-c---CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-D---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~---~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |.+.+.||+|+||.||.|.+ .   .+..||+|.+.....   .......+.+|+.++..++||||+++++.+
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   70 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH---TYSEIEEFLSEAACMKDFDHPNVMKLIGVC   70 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEeee
Confidence            46778999999999999987 3   246799999875321   344556799999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.45  E-value=5.1e-07  Score=81.98  Aligned_cols=69  Identities=23%  Similarity=0.292  Sum_probs=58.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ ..+..||||.+....   ........+.+|+.++..++||||+++++++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~   92 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIIGLLNVF   92 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc---cCchhHHHHHHHHHHHHhcCCCCccccceee
Confidence            57899999999999999999998 778899999987532   1334456788999999999999999998863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.45  E-value=4.5e-07  Score=82.30  Aligned_cols=69  Identities=22%  Similarity=0.302  Sum_probs=56.8

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.. .++..||+|.+.....  ........+..|+.++..++||||+++++.+
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~   70 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM--LEKEQVAHIRAERDILVEADGAWVVKMFYSF   70 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3688899999999999999998 7889999999975221  1233456788999999999999999998773

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.44  E-value=5.4e-07  Score=77.42  Aligned_cols=65  Identities=28%  Similarity=0.448  Sum_probs=55.0

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||+|+||.||+|....+..||+|.+...      ......+..|+.++..++||||+++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~   69 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG------TMSVQAFLEEANLMKTLQHDKLVRLYAV   69 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC------chhHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence            3578999999999999999998866678999998642      2234678999999999999999999887

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.44  E-value=5.1e-07  Score=81.04  Aligned_cols=69  Identities=16%  Similarity=0.133  Sum_probs=56.3

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|.+.+.||+|+||.||++.. .++..||+|.+.....  ........+..|+.++..++||||+.+++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   70 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--LKRAETACFREERDVLVNGDRRWITNLHYAF   70 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence            3688999999999999999998 7789999999975221  1223445688999999999999999998874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.44  E-value=2.9e-07  Score=81.80  Aligned_cols=69  Identities=20%  Similarity=0.304  Sum_probs=58.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||.|+||.|..+.+ .+|..||||.+...   .......+...+|+.+|+.++|+||+.+++..
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~---F~~~~~akRtlRElklLr~~~HeNIi~l~di~   90 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP---FENQIDAKRTLRELKLLRHLRHENIIGLLDIF   90 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh---hhchHHHHHHHHHHHHHHHhcCCCcceEEeec
Confidence            44566689999999999999999 88999999999731   23455678889999999999999999998873

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.44  E-value=4.3e-07  Score=81.17  Aligned_cols=62  Identities=21%  Similarity=0.228  Sum_probs=50.8

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +.||+|+||.||++.. .+|..||+|++.....  ........+.+|+.+|..++||||++++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~   63 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI--IAKDEVAHTLTESRVLQNTRHPFLTALKYS   63 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCCCEEEE
Confidence            3689999999999998 7889999999985321  123345678899999999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.44  E-value=6.7e-07  Score=77.78  Aligned_cols=67  Identities=31%  Similarity=0.487  Sum_probs=55.7

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   68 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE---EEGVPSTAIREISLLKELQHPNIVCLQDVL   68 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc---cCCchHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            477889999999999999998 6889999999875321   223345678999999999999999999884

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.44  E-value=4.5e-07  Score=79.15  Aligned_cols=67  Identities=22%  Similarity=0.278  Sum_probs=56.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .+|..||+|.+....    .......+.+|+.++..++||||+++++.+
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   72 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA----KSSVRKQILRELQIMHECRSPYIVSFYGAF   72 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC----cchHHHHHHHHHHHHHHcCCCCcceEeeeE
Confidence            4678889999999999999998 678999999987521    234457789999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.44  E-value=5e-07  Score=77.19  Aligned_cols=66  Identities=32%  Similarity=0.445  Sum_probs=53.3

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |...+.||+|+||.||++.. .++..+|+|.+.....   .........+|+.++..++||||++++++.
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~---~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~   67 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI---EEEEREENIREIKILRRLRHPNIVQILDVF   67 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH---HHHHHHHHHHHHHHHHHHTBTTBCHEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc---cccccchhhhhhhccccccccccccccccc
Confidence            67889999999999999999 7777899999996321   222233445699999999999999998874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.44  E-value=3.5e-07  Score=82.31  Aligned_cols=69  Identities=20%  Similarity=0.304  Sum_probs=56.8

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||+|.+ .+|..||+|++.....  ........+..|+.+|..++||||+++++++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   70 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDM--IKRNQIAHVRAERDILADADSPWIVKLYYSF   70 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHH--hhccHHHHHHHHHHHHHhcCCCCccchhhhe
Confidence            3688999999999999999999 6889999999985321  1223456788999999999999999998763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.44  E-value=8.5e-07  Score=77.47  Aligned_cols=68  Identities=29%  Similarity=0.521  Sum_probs=51.6

Q ss_pred             CeeecccccccCceeEEEEEe--cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC---CCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT--DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF---EHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIV~l~g~~~  261 (264)
                      .|...+.||+|+||.||+|.+  .+|..||+|.+.....   .......+.+|+.++..+   +||||++++++|.
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~   74 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG---EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT   74 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC---CCCchHHHHHHHHHHHhhcccCCCCcceEEEEEe
Confidence            578889999999999999987  3467899999875322   122234566777777665   6999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.43  E-value=1e-06  Score=77.14  Aligned_cols=67  Identities=24%  Similarity=0.336  Sum_probs=56.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||.|+||.||++.+ .++..+|+|.+....    .......+.+|+++++.++||||+++++.+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   68 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP----NPDLQKQILRELEINKSCKSPYIVKYYGAF   68 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC----chHHHHHHHHHHHHHHhCCCCCeeeeeeEE
Confidence            3688899999999999999999 778999999987522    234456789999999999999999999874

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.43  E-value=5.3e-07  Score=80.89  Aligned_cols=67  Identities=24%  Similarity=0.379  Sum_probs=56.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+....    .......+..|+.++..++||||++++++
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~   71 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE----HQTFCQRTLREIKILRRFKHENIIGILDI   71 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc----cchhHHHHHHHHHHHHhCCCCCcCchhhe
Confidence            46899999999999999999998 788999999986421    23344667889999999999999999876

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.43  E-value=6.5e-07  Score=83.81  Aligned_cols=62  Identities=29%  Similarity=0.406  Sum_probs=52.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ...|...+.||+|+||.||+|.+ .++..||||.+....         ....+|+.+|..++|||||+++++
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---------~~~~~Ei~il~~l~h~niv~l~~~  127 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---------QYKNRELLIMKNLNHINIIFLKDY  127 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---------chHHHHHHHHHhcCCCCCcceeee
Confidence            45799999999999999999998 788999999886411         123579999999999999998775

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.43  E-value=7e-07  Score=77.10  Aligned_cols=65  Identities=29%  Similarity=0.441  Sum_probs=52.6

Q ss_pred             eecccccccCceeEEEEEe-cCCC--eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFT-DDGF--FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~-~~g~--~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.+.||+|+||.||+|.+ ..+.  .+|+|.+....   ........+..|+.++..++||||+++++.|
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   69 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI---CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVC   69 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            4578899999999999998 4443  58999887522   2345567889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.43  E-value=5e-07  Score=79.35  Aligned_cols=70  Identities=29%  Similarity=0.444  Sum_probs=57.6

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||.|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~   75 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE---KEGFPITAIREIKILRQLNHRNIVNLKEIV   75 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc---ccCchHHHHHHHHHHHhCCCCCeeeeehee
Confidence            356789999999999999999999 6789999999975321   122335677899999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.43  E-value=2.1e-07  Score=85.54  Aligned_cols=68  Identities=26%  Similarity=0.407  Sum_probs=58.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|..++.+|+|+||.++...+ ..+..+++|.|.....   .........+|+.+++++.|||||.+.+.
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~---t~~~r~~A~~E~~lis~~~hP~iv~y~ds   71 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKL---TEPERRSAIQEMDLLSKLLHPNIVEYKDS   71 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEecccc---CchhhHHHHHHHHHHHhccCCCeeeeccc
Confidence            46788999999999999999988 6778999999997553   34455688999999999999999999887

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.43  E-value=2.8e-07  Score=86.86  Aligned_cols=66  Identities=27%  Similarity=0.479  Sum_probs=58.2

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      |..++.||-|+||.||-+.+ .+...||||.+...+.  .....+..+..||.-|..++|||+|.|.|+
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGK--Qs~EKWqDIlKEVrFL~~l~HPntieYkgC   94 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK--QSNEKWQDILKEVRFLRQLRHPNTIEYKGC   94 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeecccccc--ccHHHHHHHHHHHHHHHhccCCCcccccce
Confidence            57788999999999999999 7889999999987544  345667889999999999999999999887

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.43  E-value=7.3e-07  Score=78.41  Aligned_cols=70  Identities=24%  Similarity=0.448  Sum_probs=57.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|.....||+|+||.||++.. .++..||||.+.....   .......+.+|+.++..++||||++++++|.
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   81 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE---KEGFPITALREIKILQLLKHENVVNLIEICR   81 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC---cCCchhHHHHHHHHHHhCCCCCccceEEEEe
Confidence            56799999999999999999998 7789999999875321   2222345678999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.42  E-value=4.7e-07  Score=82.73  Aligned_cols=70  Identities=17%  Similarity=0.128  Sum_probs=57.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||++.+ .++..||+|.+.....  ........+..|+.+|..++||||+++++++
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~  112 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM--IKRSDSAFFWEERDIMAHANSEWIVQLHYAF  112 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            45789999999999999999998 7889999999975221  1223345578999999999999999999873

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.42  E-value=4.3e-07  Score=79.05  Aligned_cols=67  Identities=31%  Similarity=0.474  Sum_probs=55.4

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||+|.+ .+|..||||.+.....   .......+..|+.++++++||||+++++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   68 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE---TEGVPSTAIREISLLKELNHPNIVKLLDVI   68 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc---ccccchHHHHHHHHHHhcCCCCCcchhhhc
Confidence            478889999999999999998 7789999999875321   222335788999999999999999999873

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.42  E-value=6.6e-07  Score=78.28  Aligned_cols=67  Identities=31%  Similarity=0.482  Sum_probs=55.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +.+|...+.||+|+||.||+|.. .+|..||+|.+.....    ......+.+|+.++..++|+||++++++
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~h~ni~~~~~~   71 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE----EGVPFTAIREASLLKGLKHANIVLLHDI   71 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc----CCCcHHHHHHHHHHHhcCCCCEeEEEEE
Confidence            56799999999999999999998 6788999999875321    2223456789999999999999999987

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.42  E-value=7.9e-07  Score=77.31  Aligned_cols=66  Identities=29%  Similarity=0.590  Sum_probs=55.0

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      -|...+.||.|+||.||+|.+ .++..||+|.+....    .......+.+|+.++..++||||+++++.+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   71 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSPYVTKYYGSY   71 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc----chHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            366788899999999999988 678899999986421    234456789999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.42  E-value=5.1e-07  Score=77.68  Aligned_cols=66  Identities=23%  Similarity=0.298  Sum_probs=54.2

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|...+.||+|+||.||.+.+..+..+|+|.+....      .....+.+|+.++..++||||+++++++.
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   69 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS------MSEDEFIEEAKVMMKLSHEKLVQLYGVCT   69 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc------ccHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence            4578889999999999999988555679999987421      12356899999999999999999999853

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.42  E-value=1e-06  Score=77.95  Aligned_cols=70  Identities=26%  Similarity=0.402  Sum_probs=57.6

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..|...+.||.|+||.||+|.. .+|..||+|.+.....  ........+.+|+.++..++||||++++++|.
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~   85 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL   85 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc--CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE
Confidence            4578889999999999999998 6789999999875321  23444567899999999999999999998853

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.42  E-value=1e-06  Score=75.62  Aligned_cols=68  Identities=26%  Similarity=0.493  Sum_probs=57.6

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ++|...+.||+|+||.||+|.. .+|..||+|.+.....  ........+.+|+.++..++|+||+++++.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~   70 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM--MDAKARQDCLKEIDLLKQLDHPNVIKYLAS   70 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc--cchhhHHHHHHHHHHHHhCCCCCeeeeeee
Confidence            5789999999999999999999 6899999999875322  233446778999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.42  E-value=8.3e-07  Score=79.63  Aligned_cols=71  Identities=21%  Similarity=0.242  Sum_probs=58.9

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...++|...+.||.|+||.||++.. .+|..||+|.+.....   .......+..|+.++..++||||+++++++
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   78 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS---TPVLAKRTYRELKLLKHLRHENIISLSDIF   78 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc---ccchhHHHHHHHHHHHhcCCCCeeeEeeeE
Confidence            3467899999999999999999998 7889999999865321   223446788999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.41  E-value=7.5e-07  Score=77.41  Aligned_cols=67  Identities=30%  Similarity=0.530  Sum_probs=55.7

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      +|...+.||.|+||.||+|.+ .+|..||+|.+.....    ......+..|+.++..++||||+++++++.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   68 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE----EGTPSTAIREISLMKELKHENIVRLHDVIH   68 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc----ccchHHHHHHHHHHHhhcCCCEeeeeeeEe
Confidence            478899999999999999999 7789999999986322    222356778999999999999999998843

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.41  E-value=6.2e-07  Score=77.13  Aligned_cols=66  Identities=24%  Similarity=0.355  Sum_probs=55.1

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+..+..||+|.+....      .....+.+|+.++..++||||+++++++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~   70 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT------MDPKDFLAEAQIMKKLRHPKLIQLYAVC   70 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc------ccHHHHHHHHHHHHHCCCCCccceeEEE
Confidence            35688999999999999999988556789999987522      2245688999999999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.41  E-value=9e-07  Score=77.51  Aligned_cols=66  Identities=18%  Similarity=0.247  Sum_probs=53.4

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      |...+.||+|+||.||++.+ .++..+|+|.+.....  ........+.+|+.+|..++|+||+.+++.
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~   68 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRI--KKRKGESMALNEKQILEKVNSQFVVNLAYA   68 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhh--hhhhHHHHHHHHHHHHHHcCCcCceeEEEE
Confidence            56778899999999999999 7889999999975321  122234557889999999999999998876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.41  E-value=8.2e-07  Score=75.86  Aligned_cols=61  Identities=31%  Similarity=0.438  Sum_probs=51.2

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+ .++..+|+|.+...    ........+.+|+.++..++||||++++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   62 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET----LPPDLKAKFLQEARILKQYSHPNIVRLIGVC   62 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCcc----CCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            3689999999999998 68899999987641    1344456789999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.40  E-value=1.2e-06  Score=74.85  Aligned_cols=67  Identities=30%  Similarity=0.507  Sum_probs=56.1

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||++.+ .+|..+|+|.+.....   .......+..|+.+++.++||||+++++.+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM---TEKEKQQLVSEVNILRELKHPNIVRYYDRI   68 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC---CHHHHHHHHHHHHHHHhcCCCccceeeeee
Confidence            477889999999999999998 7888999999875322   344556788999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.40  E-value=8.2e-07  Score=76.72  Aligned_cols=66  Identities=26%  Similarity=0.386  Sum_probs=53.4

Q ss_pred             eeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |...+.||+|+||.||+|.+    .++..||||.+....   ........+.+|+.+|+.++||||+++++++
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   70 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI---FSSSDIEEFLREAACMKEFDHPNVIKLIGVS   70 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc---CChHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence            45678899999999999986    246789999987532   1344566789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.40  E-value=6.3e-07  Score=79.64  Aligned_cols=61  Identities=25%  Similarity=0.254  Sum_probs=50.0

Q ss_pred             ccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       198 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ||+|+||.||++.+ .++..||+|.+.....  ........+.+|+.+|..++|||||++++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   62 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI--VSRSEVTHTLAERTVLAQVNCPFIVPLKFSF   62 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCcEeceeeEE
Confidence            79999999999999 7788999999975321  1234456788999999999999999998773

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.40  E-value=4.8e-07  Score=78.92  Aligned_cols=65  Identities=29%  Similarity=0.489  Sum_probs=55.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +|+..+.||+|+||.||++.+ .+|..||+|.+...    ........+.+|+.++..++||||+++++.
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~----~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~   67 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE----LDESKFNQIIMELDILHKAVSPYIVDFYGA   67 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc----cCHHHHHHHHHHHHHHHhcCCCcHHhhhhh
Confidence            578889999999999999999 68899999998752    133445678999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.40  E-value=3.9e-08  Score=85.81  Aligned_cols=61  Identities=30%  Similarity=0.632  Sum_probs=55.3

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      |.++.+||+|+||.||++.+ .+|..+|||.+..       ....+++..|+.||..++.|.+|++||+
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-------~sDLQEIIKEISIMQQC~S~yVVKYYGS   96 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-------DTDLQEIIKEISIMQQCKSKYVVKYYGS   96 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-------cchHHHHHHHHHHHHHcCCchhhhhhhh
Confidence            57789999999999999999 8899999999985       3456789999999999999999999997

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.39  E-value=1.1e-06  Score=74.96  Aligned_cols=67  Identities=21%  Similarity=0.428  Sum_probs=56.8

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||+|+||.||++.+ .+|..|++|.+.....   .......+.+|+.+++.++||||+++++.+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   68 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM---NRREREEAIDEARVLAKLDSSYIIRYYESF   68 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC---CHHHHHHHHHHHHHHHhcCCCCeehheeee
Confidence            477889999999999999998 7789999999875322   345567789999999999999999999873

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.39  E-value=7.4e-07  Score=77.46  Aligned_cols=67  Identities=30%  Similarity=0.550  Sum_probs=57.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||.|+||.||++.+ .++..+|+|.+..     ........+..|+.++..++||||+++++.+
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQI-----ESEEELEDFMVEIDILSECKHPNIVGLYEAY   71 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEee-----CCHHHHHHHHHHHHHHHhCCCCceeEEEEEE
Confidence            35688899999999999999998 6788999999875     2344557789999999999999999999873

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.39  E-value=7.3e-07  Score=79.77  Aligned_cols=63  Identities=21%  Similarity=0.202  Sum_probs=51.2

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++.. .+|..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~   64 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTALKYAF   64 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCcceeeEE
Confidence            3689999999999998 7889999999985321  1233456678899999999999999998874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=98.39  E-value=8.6e-07  Score=76.47  Aligned_cols=67  Identities=27%  Similarity=0.393  Sum_probs=54.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC---CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||+|+||.||+|.+ ..   ...||+|.+...    ........+.+|+.++..++||||+++++.
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   73 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG----SSDKQRLDFLTEASIMGQFDHPNIIRLEGV   73 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCC----CChHHHHHHHHHHHHHHhCCCCCcceEeEE
Confidence            35688999999999999999988 22   357999998752    134445678999999999999999999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.39  E-value=8.6e-07  Score=77.49  Aligned_cols=68  Identities=32%  Similarity=0.514  Sum_probs=56.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||.|+||.||+|.. .++..||+|.+.....    ......+.+|+.+++.++||||+++++++
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   72 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE----EGAPFTAIREASLLKDLKHANIVTLHDII   72 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc----cCCchhHHHHHHHHhhCCCcceeeEEEEE
Confidence            46789999999999999999998 6789999999875321    11223567899999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.39  E-value=9.1e-07  Score=76.13  Aligned_cols=70  Identities=33%  Similarity=0.649  Sum_probs=56.6

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCC-cChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGT-QGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~-~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||+|+||.||.+.. .++..+|+|.+....... ........+.+|+.+++.++||||+++++.+
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   72 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT   72 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee
Confidence            467789999999999999998 788999999997532211 1123457889999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.39  E-value=1.1e-06  Score=88.80  Aligned_cols=69  Identities=26%  Similarity=0.423  Sum_probs=59.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|.+...||.|+||.||++.+ .++..||+|.+.....   .......+..|+.+|..|+|||||++++++
T Consensus        12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l---~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f   81 (1021)
T PTZ00266         12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL---KEREKSQLVIEVNVMRELKHKNIVRYIDRF   81 (1021)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc---CHHHHHHHHHHHHHHHHcCCCCcCeEEEEE
Confidence            57899999999999999999999 7788999999985332   344567789999999999999999999864

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.38  E-value=7e-07  Score=81.65  Aligned_cols=69  Identities=17%  Similarity=0.159  Sum_probs=56.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..+|...+.||+|+||.||++.+ .++..+|+|.+.....  ........+..|+.++..++||||++++++
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~  111 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFCA  111 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            46789999999999999999999 7788999999975221  122334567899999999999999999987

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.38  E-value=3.1e-07  Score=80.00  Aligned_cols=71  Identities=27%  Similarity=0.381  Sum_probs=61.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|+..+.||.|+||.|.+.+. .+|..+|+|++.+...  ...++.....+|..+|+.+.||+++.|++.|.
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v--VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~  114 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV--VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK  114 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHH--HHHHHHHHHhhHHHHHhhccCceeEEEEEeec
Confidence            57889999999999999999999 7889999999987543  34566778899999999999999999998754

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.38  E-value=1e-06  Score=76.55  Aligned_cols=68  Identities=28%  Similarity=0.238  Sum_probs=56.3

Q ss_pred             cCCeeecccccccCceeEEEEEecC-----CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDD-----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+..     +..|++|.+...    ........+.+|+.+|..++||||+++++++
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~   77 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH----ASEIQVTLLLQESCLLYGLSHQNILPILHVC   77 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            4678899999999999999999822     578999988642    2445567789999999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.38  E-value=1.5e-06  Score=74.34  Aligned_cols=67  Identities=27%  Similarity=0.361  Sum_probs=56.7

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|+..+.||.|+||.||.+.. .++..+++|.+.....   .......+.+|+.++++++||||+++++++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   68 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL---SEKERRDALNEIVILSLLQHPNIIAYYNHF   68 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc---chhHHHHHHHHHHHHHhCCCCCeeEEEeEE
Confidence            478899999999999999988 7788999999875332   344566789999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.38  E-value=6.4e-07  Score=77.15  Aligned_cols=69  Identities=28%  Similarity=0.478  Sum_probs=57.0

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .+|..+|||.+.....  ........+.+|+.++..++||||+++++.+
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   71 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL--MDAKARADCIKEIDLLKQLNHPNVIKYYASF   71 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh--hhHHHHHHHHHHHHHHHHccCCchhhhhhee
Confidence            4678889999999999999998 7889999998875321  2334456789999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.38  E-value=1e-06  Score=77.22  Aligned_cols=68  Identities=25%  Similarity=0.347  Sum_probs=56.8

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ++|...+.||+|+||.||++.+ .++..+|+|.+.....  ........+.+|+.+|+.++||||+++++.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   69 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI--VKLKQVEHVLNEKRILQSIRHPFLVNLYGS   69 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCccceeeE
Confidence            3688899999999999999999 7789999999975321  123445678899999999999999999987

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.38  E-value=1.6e-06  Score=75.35  Aligned_cols=67  Identities=19%  Similarity=0.296  Sum_probs=52.5

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHH-HhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL-LGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~i-L~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .+|..||+|.+....    .......+..|+.+ ++.++|||||++++++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~   69 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATV----NSQEQKRLLMDLDISMRSVDCPYTVTFYGAL   69 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCC----CcHHHHHHHHHHHHHHHHcCCCCeeeeeEEE
Confidence            3688899999999999999999 789999999997532    12223456667765 5667899999999874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.38  E-value=1.1e-06  Score=77.10  Aligned_cols=68  Identities=28%  Similarity=0.413  Sum_probs=56.8

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|.....||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.+++.++||||+++++++
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   70 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE---DEGVPSTAIREISLLKEMQHGNIVRLQDVV   70 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc---cccchHHHHHHHHHHHhccCCCEeeEEEEE
Confidence            5688999999999999999998 6789999999875321   223345688999999999999999999884

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.38  E-value=1e-06  Score=78.76  Aligned_cols=64  Identities=25%  Similarity=0.313  Sum_probs=52.4

Q ss_pred             eccccccc--CceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          194 KGAPLGSG--SFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       194 ~~~~lG~G--~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +..+||+|  +||.||++.. .+|..||+|.+.....   .......+..|+.+++.++|||||++++++
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~hpniv~~~~~~   68 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC---TNEMVTFLQGELHVSKLFNHPNIVPYRATF   68 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhc---cHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            45789999  7889999998 8899999999975321   234456788899999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.38  E-value=9.4e-07  Score=79.04  Aligned_cols=69  Identities=20%  Similarity=0.172  Sum_probs=56.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.. .+|..||+|.+.....  ........+..|+.++..++||||+++++++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~   70 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL--LAQETVSFFEEERDILSISNSPWIPQLQYAF   70 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceeeEE
Confidence            3688899999999999999998 7889999999985321  1233456788999999999999999998763

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.37  E-value=1.1e-06  Score=75.50  Aligned_cols=66  Identities=27%  Similarity=0.351  Sum_probs=55.3

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||.|+||.||++.+..+..||||.+....      .....+.+|+.++..++||||+++++++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~   70 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT------MSPEAFLQEAQIMKKLRHDKLVQLYAVC   70 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc------cCHHHHHHHHHHHhhCCCCCEeeeeeee
Confidence            46789999999999999999988556789999987522      2245788999999999999999999873

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.37  E-value=5.8e-07  Score=77.09  Aligned_cols=67  Identities=24%  Similarity=0.297  Sum_probs=56.0

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +|...+.||.|+||.||++.+ .++..||+|.+.....  ........+.+|+.++.+++||||+++++.
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   68 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC--VEKGSVRNVLNERRILQELNHPFLVNLWYS   68 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh--cchhHHHHHHHHHHHHHhCCCCChHHHHHh
Confidence            478899999999999999999 6789999999985321  123456789999999999999999998765

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.37  E-value=9.7e-07  Score=77.44  Aligned_cols=70  Identities=26%  Similarity=0.490  Sum_probs=55.8

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||+|.+ .+|..||+|.+...............+..|+.++..++||||+++++++
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   71 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF   71 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee
Confidence            367788999999999999998 6789999999986432111123345677899999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.37  E-value=1.3e-06  Score=75.12  Aligned_cols=70  Identities=43%  Similarity=0.776  Sum_probs=55.7

Q ss_pred             CeeecccccccCceeEEEEEecCCCeEEEEEeecCCCC-CcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQG-TQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||+|...+|..+|+|.+...... .........+.+|+.++..++||||++++++|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   71 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC   71 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEe
Confidence            36778899999999999998777889999998753211 11223446689999999999999999999874

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.36  E-value=1.6e-06  Score=76.04  Aligned_cols=67  Identities=18%  Similarity=0.226  Sum_probs=54.3

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |...+.||+|+||.||++.+ .++..||+|.+.....  ........+..|+.++..++|+||+.+++.+
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~   69 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGESMALNEKQILEKVNSRFVVSLAYAY   69 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhc--cchHHHHHHHHHHHHHHhCCCCCeeeeeEEE
Confidence            66778899999999999999 7889999999875322  1223345678899999999999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.36  E-value=1.5e-06  Score=74.42  Aligned_cols=66  Identities=33%  Similarity=0.577  Sum_probs=56.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||.|+||.||++.+ .++..+++|.+...     .......+.+|+.++..++||||++++++
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~-----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~   68 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLE-----PGDDFEIIQQEISMLKECRHPNIVAYFGS   68 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcC-----chhhHHHHHHHHHHHHhCCCCChhceEEE
Confidence            35789999999999999999998 67889999999853     22345788999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.36  E-value=7.8e-07  Score=78.89  Aligned_cols=59  Identities=25%  Similarity=0.456  Sum_probs=48.2

Q ss_pred             cccccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          195 GAPLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +..||+|+||.||+|.+   ..+..+|+|.+....       ....+.+|+.+|..++|||||++++++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~   67 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-------ISMSACREIALLRELKHPNVISLQKVF   67 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-------CcHHHHHHHHHHHhcCCCCCcceeeeE
Confidence            56899999999999986   356789999987421       123577899999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.36  E-value=9.1e-07  Score=80.90  Aligned_cols=71  Identities=17%  Similarity=0.141  Sum_probs=57.8

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||++.+ .++..+|+|.+.....  ........+..|+.++..++||||+++++++
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~  112 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFYAF  112 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            357899999999999999999999 7889999999974221  1223345678999999999999999999873

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.36  E-value=7.7e-07  Score=86.70  Aligned_cols=65  Identities=25%  Similarity=0.430  Sum_probs=57.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      ....+.+.|.+|||+.||.+.+ ..|..+|+|.+-.     .+......+.+||.+|+.|. |+|||.|+++
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~-----~de~~L~~v~~EI~~MK~L~gh~nIV~yids  103 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV-----NDEEALNAVKREIDIMKLLSGHKNIVSYIDS  103 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec-----CCHHHHHHHHHHHHHHHHhcCCCceeeEecc
Confidence            4567889999999999999999 5558999999875     36777889999999999997 9999999994

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=98.36  E-value=5e-07  Score=87.39  Aligned_cols=66  Identities=27%  Similarity=0.401  Sum_probs=57.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cC---CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ....+.++||.|.||.|+.|.+ ..   ...||||.|+..    -.++....|+.|..||.+++||||++|-|+
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G----ytekqrrdFL~EAsIMGQFdHPNIIrLEGV  698 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG----YTEKQRRDFLSEASIMGQFDHPNIIRLEGV  698 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccC----ccHHHHhhhhhhhhhcccCCCCcEEEEEEE
Confidence            4677899999999999999998 33   357999999862    256778899999999999999999999997

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.36  E-value=1e-06  Score=77.97  Aligned_cols=68  Identities=26%  Similarity=0.454  Sum_probs=56.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..++||||++++++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   74 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE---RDGIPISSLREITLLLNLRHPNIVELKEV   74 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC---CCCCcchhhHHHHHHHhCCCCCCcceEEE
Confidence            57899999999999999999999 7889999999975322   11222346689999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.36  E-value=1e-06  Score=75.88  Aligned_cols=65  Identities=28%  Similarity=0.437  Sum_probs=55.5

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||+|.+ ..+..||+|.+..      .......+.+|+.++..++||||+++++.|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------DTMEVEEFLKEAAVMKEIKHPNLVQLLGVC   71 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecC------CchHHHHHHHHHHHHHhCCCCChhheEEEE
Confidence            4578889999999999999998 6788999999874      223346788999999999999999999874

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.36  E-value=8.2e-07  Score=79.34  Aligned_cols=67  Identities=25%  Similarity=0.304  Sum_probs=51.2

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHH---hcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL---GQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL---~~l~HpNIV~l~g~~  260 (264)
                      |.+.+.||+|+||.||++.+ .+|..||||.+.....  ........+.+|+.++   ..++||||+++++++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~   71 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDI--IARDEVESLMCEKRIFETANSERHPFLVNLFACF   71 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccccCCCChhceeeEE
Confidence            56788999999999999998 7889999999985321  1223345667776655   567899999999873

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.36  E-value=1.4e-06  Score=76.42  Aligned_cols=66  Identities=29%  Similarity=0.498  Sum_probs=57.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.|.+.+.||.|+||.||+|.+ .++..+++|.+..     ........+.+|+.++..++||||+++++.+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   78 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIET-----KSEEELEDYMVEIEILATCNHPYIVKLLGAF   78 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEecc-----CCHHHHHHHHHHHHHHHhCCCCcEeeeEEEE
Confidence            4678899999999999999998 7788999999875     2445567789999999999999999999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.36  E-value=6.4e-07  Score=77.94  Aligned_cols=68  Identities=22%  Similarity=0.332  Sum_probs=55.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||+|.+ .++..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   69 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED---DKMVKKIAMREIRMLKQLRHENLVNLIEVF   69 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC---cchhhHHHHHHHHHHHhcCCcchhhHHHhc
Confidence            3678899999999999999999 6789999999865321   223345688999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.35  E-value=7.2e-07  Score=77.02  Aligned_cols=67  Identities=27%  Similarity=0.519  Sum_probs=55.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~~  261 (264)
                      ...|...+.||+|+||.||+|.+ .++..||+|.+...      ......+.+|+.++..+ +||||+++++.+.
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~------~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   73 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT------GDEEEEIKQEINMLKKYSHHRNIATYYGAFI   73 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC------CccHHHHHHHHHHHHHhcCCCCeeeEeeEEe
Confidence            45678889999999999999998 77889999998752      22335688999999998 6999999998753

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.35  E-value=1.7e-06  Score=75.33  Aligned_cols=67  Identities=30%  Similarity=0.551  Sum_probs=51.3

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC---CCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF---EHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..+   +||||+++++++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~   71 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTN---EDGLPLSTVREVALLKRLEAFDHPNIVRLMDVC   71 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcC---CCCCchHHHHHHHHHHHhhhcCCCCeeeeeeee
Confidence            377889999999999999999 7889999999875322   111223456777777655   799999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.35  E-value=2.2e-06  Score=73.55  Aligned_cols=67  Identities=24%  Similarity=0.406  Sum_probs=56.6

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||.|+||.||+|.. .++..+++|.+....    .......+.+|+.+|+.++||||+++++.+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEK----CQTSVDELRKEVQAMSQCNHPNVVKYYTSF   68 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCC----cchHHHHHHHHHHHHHhcCCCCEEEEEEEE
Confidence            3688899999999999999998 678899999987532    222567899999999999999999999863

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.35  E-value=1.2e-06  Score=78.58  Aligned_cols=63  Identities=21%  Similarity=0.208  Sum_probs=51.4

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++.. .+|..||+|++.....  ........+.+|+.+|..++||||+++++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   64 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI--IAKDEVAHTLTESRVLKNTRHPFLTSLKYSF   64 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence            3689999999999998 7889999999985321  1234456788999999999999999998763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.35  E-value=1.5e-06  Score=75.42  Aligned_cols=68  Identities=24%  Similarity=0.367  Sum_probs=55.7

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|+....||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   69 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED---DPVIKKIALREIRMLKQLKHPNLVNLIEVF   69 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc---CccccHHHHHHHHHHHhCCCCCEeeeeeEE
Confidence            3688889999999999999998 6789999999875321   122335678999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.35  E-value=8.2e-07  Score=84.72  Aligned_cols=72  Identities=24%  Similarity=0.269  Sum_probs=60.8

Q ss_pred             HHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          186 RRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       186 ~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      ....++|.+.++||+|+||+|+++.. .++..+|||++++...  .....+.....|-.|+.-.. ||.+++|+++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~I--l~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~  437 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDI--LQRDEVESLMCEKRIFELANRHPFLVNLFSC  437 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccce--eccccHHHHHHHHHHHHHhccCCeEeecccc
Confidence            34467999999999999999999999 7888999999998654  34556677888888887764 9999999987

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.35  E-value=2.3e-06  Score=73.28  Aligned_cols=66  Identities=26%  Similarity=0.360  Sum_probs=55.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||++.+ .++..+|+|.+....    .......+..|+.++..++||||+++++.+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   67 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK----SSSAVEDSRKEAVLLAKMKHPNIVAFKESF   67 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc----chHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            477889999999999999998 778999999987522    233456788999999999999999998873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.35  E-value=1.2e-06  Score=76.22  Aligned_cols=68  Identities=24%  Similarity=0.466  Sum_probs=56.2

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ...++|...+.||+|+||.||++.+ .++..+|+|.+...      ......+..|+.++..+ +||||+++++++
T Consensus        15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~------~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   84 (286)
T cd06638          15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI------HDIDEEIEAEYNILKALSDHPNVVKFYGMY   84 (286)
T ss_pred             CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc------cchHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence            3467899999999999999999998 77889999988641      12235678899999999 699999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.35  E-value=1.8e-06  Score=73.82  Aligned_cols=67  Identities=27%  Similarity=0.458  Sum_probs=56.2

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||.+.. .+|..||+|.+.....   .......+.+|+.+++.++||||+++++.+
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM---SPKEREESRKEVAVLSNMKHPNIVQYQESF   68 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC---ChHHHHHHHHHHHHHHhCCCCCeeeeEeee
Confidence            478889999999999999998 7788999999975322   234456789999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.35  E-value=1.7e-06  Score=75.12  Aligned_cols=67  Identities=22%  Similarity=0.294  Sum_probs=56.3

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.+++.++||||+++++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   68 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL---EGGIPNQALREIKALQACQHPYVVKLLDVF   68 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc---cchhhHHHHHHHHHHHhCCCCCCcceeeEE
Confidence            477889999999999999998 6789999999986322   233456789999999999999999999873

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.34  E-value=1.5e-06  Score=74.78  Aligned_cols=65  Identities=26%  Similarity=0.365  Sum_probs=55.0

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+.|...+.||+|+||.||++.+..+..+|+|.+..      .......+.+|+.++..++|+||+++++.
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   69 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP------GSMSVEAFLAEANVMKTLQHDKLVKLHAV   69 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCC------ChhHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence            467899999999999999999875566799998874      23345678899999999999999999887

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.34  E-value=1.6e-06  Score=78.46  Aligned_cols=70  Identities=24%  Similarity=0.326  Sum_probs=58.1

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ....|...+.||+|+||.||++.. .+|..||+|.+....   ........+.+|+.++..++||||+++++++
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   84 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF---QNVTHAKRAYRELVLMKLVNHKNIIGLLNVF   84 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc---cChhHHHHHHHHHHHHHhcCCCCCcceeeee
Confidence            357899999999999999999998 788999999986422   1334456678999999999999999998864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.34  E-value=1.2e-06  Score=78.54  Aligned_cols=69  Identities=14%  Similarity=0.084  Sum_probs=55.7

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .++..||+|.+.....  ........+..|+.++..++||||+.+++++
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~   70 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEM--LKRAETACFREERNVLVNGDCQWITTLHYAF   70 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHH--HhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            4688999999999999999998 7788999999975211  1223345578899999999999999998773

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.34  E-value=1.4e-06  Score=75.91  Aligned_cols=67  Identities=28%  Similarity=0.418  Sum_probs=54.7

Q ss_pred             CCeeecccccccCceeEEEEEe-----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|++.+.||+|+||.||+|.+     ..+..+|+|.+...    ........+.+|+.++..++||||+++++++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   76 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI----NNPQQWGEFQQEASLMAELHHPNIVCLLGVV   76 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC----CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEE
Confidence            5678889999999999999985     24568999998742    2334456789999999999999999999873

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.34  E-value=9.8e-07  Score=75.35  Aligned_cols=67  Identities=27%  Similarity=0.461  Sum_probs=55.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||++.. .+|..+|+|.+.....   .......+.+|+.+++.++||||+++++.+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~   68 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM---PVKEKEASKKEVILLAKMKHPNIVTFFASF   68 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc---cchhhHHHHHHHHHHHhCCCCChhhhhhee
Confidence            478889999999999999999 6788999999976322   223345678999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PHA02988 hypothetical protein; Provisional

Probab=98.34  E-value=1.5e-06  Score=76.35  Aligned_cols=63  Identities=16%  Similarity=0.220  Sum_probs=51.9

Q ss_pred             ccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          196 APLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..||+|++|.||+|.+ +|..||||.+.....  ........+.+|+.+|.+++|||||+++|++.
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~   88 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHK--GHKVLIDITENEIKNLRRIDSNNILKIYGFII   88 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEecccccc--ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEE
Confidence            6789999999999998 788999999975322  12333567889999999999999999998753

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.34  E-value=1.6e-06  Score=75.11  Aligned_cols=66  Identities=29%  Similarity=0.530  Sum_probs=55.7

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||+|.+ .++..||+|.+....    .......+.+|+.+++.++||||+++++.+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   68 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE----AEDEIEDIQQEIQFLSQCRSPYITKYYGSF   68 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc----cchHHHHHHHHHHHHHHcCCCCeeeeeEEE
Confidence            577889999999999999998 778999999987521    233456788999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.33  E-value=1.8e-06  Score=76.06  Aligned_cols=67  Identities=24%  Similarity=0.397  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||.|+||.||++.. .++..||+|.+....     ......+.+|+.++..++||||+++++.+
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   85 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ-----QPKKELIINEILVMRENKNPNIVNYLDSY   85 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc-----cchHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            35788999999999999999998 788999999997522     22345688999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.33  E-value=1.1e-06  Score=82.96  Aligned_cols=61  Identities=21%  Similarity=0.215  Sum_probs=52.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|.+.+.||+|+||.||++.+ ..+..||||....           ..+.+|+.+|..++|||||++++++
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----------~~~~~E~~iL~~L~HpnIv~l~~~~  229 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----------ASSVHEARLLRRLSHPAVLALLDVR  229 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----------cCHHHHHHHHHHCCCCCCCcEEEEE
Confidence            34799999999999999999999 7788999996432           2356899999999999999999874

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.33  E-value=1.5e-06  Score=75.02  Aligned_cols=67  Identities=28%  Similarity=0.417  Sum_probs=54.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCC---CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDG---FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g---~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||+|.+ .++   ..+|+|.+...    ........+..|+.++..++||||+++++++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   74 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAG----YTEKQRRDFLSEASIMGQFDHPNIIHLEGVV   74 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCC----CCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            4688899999999999999987 333   36999988642    1234456889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.33  E-value=1.3e-06  Score=75.32  Aligned_cols=66  Identities=30%  Similarity=0.562  Sum_probs=55.4

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .++..||+|.+...     .......+.+|+.++..++||||+++++.+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~-----~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~   75 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE-----PGEDFAVVQQEIIMMKDCKHSNIVAYFGSY   75 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC-----chhHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            4678889999999999999998 77899999998752     223345678999999999999999999873

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.33  E-value=1.4e-07  Score=86.60  Aligned_cols=68  Identities=24%  Similarity=0.305  Sum_probs=55.7

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      ..++|...+.||.|.||.||+|.. .+|..||||.++..-.    .-....-+|||..|++|+ |||||+|+.+
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~----s~ee~~nLREvksL~kln~hpniikL~Ev   77 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY----SWEECMNLREVKSLRKLNPHPNIIKLKEV   77 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc----cHHHHHHHHHHHHHHhcCCCCcchhhHHH
Confidence            356789999999999999999998 8899999999875221    112234579999999999 9999999876

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.32  E-value=1.2e-06  Score=76.77  Aligned_cols=69  Identities=23%  Similarity=0.373  Sum_probs=56.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||.|+||.||+|.+ .++..+|+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~   73 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE---KEGFPITSLREINILLKLQHPNIVTVKEVV   73 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc---cccchhhHHHHHHHHHhcCCCCEEEEEEEE
Confidence            35688899999999999999999 6788999999985332   222334577899999999999999998864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.32  E-value=6.7e-07  Score=77.82  Aligned_cols=66  Identities=29%  Similarity=0.515  Sum_probs=54.2

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +|...+.||+|+||.||++.+ .+|..||+|.+.....   .......+.+|+.++..++||||++++++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~   67 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD---DEGVPSSALREICLLKELKHKNIVRLYDV   67 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc---cccCccchhHHHHHHHhcCCCCeeeHHHH
Confidence            377889999999999999999 7889999999975321   22233567789999999999999998876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.32  E-value=1.3e-06  Score=78.64  Aligned_cols=69  Identities=25%  Similarity=0.348  Sum_probs=57.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|.....||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~   83 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ---SEIFAKRAYRELTLLKHMQHENVIGLLDVF   83 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc---cccchhHHHHHHHHHHhcCCCCccchhhee
Confidence            46789999999999999999998 6789999999875221   222345688999999999999999998874

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.32  E-value=1.9e-06  Score=84.83  Aligned_cols=70  Identities=27%  Similarity=0.362  Sum_probs=58.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||.|+||.||+|.+ .++..||||++.....  ........+..|+.++..++||||+++++++
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~   73 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM--INKNMVHQVQAERDALALSKSPFIVHLYYSL   73 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc--cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE
Confidence            46799999999999999999999 6789999999975332  2344557789999999999999999998763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.32  E-value=2.1e-06  Score=81.74  Aligned_cols=68  Identities=26%  Similarity=0.283  Sum_probs=58.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..+|.+.+.||+|+||.||++.+ .+|..||||.+.....   .......+.+|+.+|..++|+||+++++.
T Consensus        31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~---~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~   99 (496)
T PTZ00283         31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM---SEADKNRAQAEVCCLLNCDFFSIVKCHED   99 (496)
T ss_pred             CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC---CHHHHHHHHHHHHHHhcCCCCcEEEeecc
Confidence            56899999999999999999998 7889999999986432   34556678899999999999999997754

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.32  E-value=2.1e-06  Score=73.58  Aligned_cols=67  Identities=37%  Similarity=0.836  Sum_probs=57.2

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||+|.. .++..|++|.+.....   .......+..|+.+++.++||||+++++.+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~   68 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN---DPKTIKEIADEMKVLELLKHPNLVKYYGVE   68 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc---chHHHHHHHHHHHHHHhCCCCChhheeeeE
Confidence            377889999999999999998 6788999999986432   234678899999999999999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.32  E-value=1.4e-06  Score=76.01  Aligned_cols=69  Identities=23%  Similarity=0.377  Sum_probs=56.1

Q ss_pred             cCCeeecccccccCceeEEEEEec------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTD------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|.....||+|+||.||++.+.      ++..||+|.+....    .......+.+|+.++..++||||++++++|.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~   78 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDHPNIVKLLGVCA   78 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc----CHHHHHHHHHHHHHHHhcCCCchheEEEEEc
Confidence            356889999999999999999862      46789999987521    3344567899999999999999999998743

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.32  E-value=1.2e-06  Score=78.78  Aligned_cols=69  Identities=19%  Similarity=0.292  Sum_probs=56.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||++.+ .+|..||||.+.....   .......+.+|+.++..++||||+++++++
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~   73 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD---NRIDAKRTLREIKLLRHLDHENVIAIKDIM   73 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc---ccchhHHHHHHHHHHHhcCCCCccchHHhe
Confidence            45789999999999999999998 7889999999875321   223345678899999999999999998763

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.32  E-value=1.9e-06  Score=74.95  Aligned_cols=68  Identities=25%  Similarity=0.412  Sum_probs=55.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCC----eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGF----FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|...+.||+|+||.||+|.+ .+|.    .+|+|.+....    .......+.+|+.+|..++||||++++++|.
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   79 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET----SPKANKEILDEAYVMASVDHPHVVRLLGICL   79 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            4678899999999999999987 4443    58999887521    3445567899999999999999999998753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.32  E-value=1.1e-06  Score=75.45  Aligned_cols=65  Identities=28%  Similarity=0.366  Sum_probs=54.0

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|.+.+.||+|+||.||++.+..+..+|+|.+.....      ....+.+|+.+++.++||||+++++.+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~   70 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM------SPESFLEEAQIMKKLRHDKLVQLYAVV   70 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC------CHHHHHHHHHHHHhcCCCceEEEEeEE
Confidence            46788899999999999999876667899999875221      235689999999999999999998873

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.31  E-value=1.1e-06  Score=79.07  Aligned_cols=66  Identities=35%  Similarity=0.486  Sum_probs=56.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..+|...+.||.|+||.||+|.. .+|..||+|.+....     ......+.+|+.++..++||||++++++
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~-----~~~~~~~~~Ei~~l~~l~h~~i~~~~~~   70 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD-----PQSVKHALREIKIIRRLDHDNIVKVYEV   70 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC-----CchHHHHHHHHHHHHhcCCCcchhhHhh
Confidence            36789999999999999999998 788999999987532     2345678899999999999999998864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.31  E-value=1.8e-06  Score=76.34  Aligned_cols=68  Identities=25%  Similarity=0.474  Sum_probs=54.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCC----eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGF----FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|...+.||+|+||.||+|.+ .+|.    .||+|.+...    ........+.+|+.++..++||||++++|.|.
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~   79 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET----TGPKANVEFMDEALIMASMDHPHLVRLLGVCL   79 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEc
Confidence            4678889999999999999988 5554    4688887642    12334456889999999999999999999863

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.31  E-value=1.9e-06  Score=74.51  Aligned_cols=70  Identities=39%  Similarity=0.637  Sum_probs=54.4

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc-----ChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ-----GEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~-----~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||.|+||.||+|.. .+|..+|+|.+........     .......+..|+.++..++||||+++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   77 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE   77 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe
Confidence            367788999999999999988 6788999999864221100     111235678899999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.31  E-value=1.1e-06  Score=77.27  Aligned_cols=69  Identities=23%  Similarity=0.460  Sum_probs=56.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||.|+||.||++.+ .++..+|+|.+.....   .......+.+|+.++..++||||+++++.+
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   76 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE---KDGFPITALREIKILKKLKHPNVVPLIDMA   76 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccC---CCCcchhHHHHHHHHHhcCCCCccchhhhe
Confidence            57899999999999999999998 7789999999875321   112234567899999999999999998753

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.31  E-value=1.8e-06  Score=74.58  Aligned_cols=67  Identities=30%  Similarity=0.465  Sum_probs=55.0

Q ss_pred             CCeeecccccccCceeEEEEEe-cCC---CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDG---FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g---~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||+|.+ .++   ..||+|.+...    ........+..|+.++..++||||+++++++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~   74 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG----YTEKQRRDFLSEASIMGQFDHPNIIHLEGVV   74 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC----CCHHHHHHHHHHHHHHHhCCCcCcceEEEEE
Confidence            4578899999999999999998 444   36999998742    1344567899999999999999999999873

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.31  E-value=8.5e-07  Score=77.04  Aligned_cols=66  Identities=32%  Similarity=0.604  Sum_probs=54.9

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||.|+||.||+|.+ .++..||+|.+....    .......+.+|+.+++.++||||+++++.+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSPYITRYYGSY   71 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc----chHHHHHHHHHHHHHHcCCCCccHhhhccc
Confidence            356778899999999999998 678899999987521    234456789999999999999999999874

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.31  E-value=2e-06  Score=75.31  Aligned_cols=69  Identities=20%  Similarity=0.254  Sum_probs=55.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC----------------CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCC
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD----------------GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD  251 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~----------------g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~Hp  251 (264)
                      ..+|.+.+.||+|+||.||++.+ ..                +..||+|.+....    .......+.+|+.+|..++||
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~e~~~l~~l~~~   79 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA----SDNAREDFLKEVKILSRLSDP   79 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc----CHHHHHHHHHHHHHHHhcCCC
Confidence            35788999999999999999886 22                2458999987522    335567899999999999999


Q ss_pred             Cceeeeeeee
Q 024683          252 NIVQYFGTEK  261 (264)
Q Consensus       252 NIV~l~g~~~  261 (264)
                      ||+++++++.
T Consensus        80 ~i~~~~~~~~   89 (296)
T cd05051          80 NIARLLGVCT   89 (296)
T ss_pred             CEeEEEEEEe
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.31  E-value=1.7e-06  Score=74.15  Aligned_cols=65  Identities=29%  Similarity=0.387  Sum_probs=55.5

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||.|+||.||+|.. .|..||+|.+...      ....+.+.+|+.++..++||||+++++.+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   69 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDD------STAAQAFLAEASVMTTLRHPNLVQLLGVV   69 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccc------hhHHHHHHHHHHHHHhcCCcceeeeEEEE
Confidence            35678899999999999999987 5788999999752      22457789999999999999999999884

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.31  E-value=1.2e-06  Score=76.24  Aligned_cols=67  Identities=22%  Similarity=0.336  Sum_probs=56.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||+|+||.||+|.+ .++..||+|.+.....   .......+.+|+.+++.++||||+++++.+
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   69 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED---DEDVKKTALREVKVLRQLRHENIVNLKEAF   69 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc---cccchhHHHHHHHHHHhcCCCCeeehhheE
Confidence            688899999999999999998 6788999999875321   233456789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.30  E-value=2.5e-06  Score=73.45  Aligned_cols=69  Identities=46%  Similarity=0.792  Sum_probs=54.6

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc----ChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ----GEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~----~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |.....||.|+||.||+|.+ .++..+|+|.+........    .......+.+|+.++..++||||+++++++
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   75 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS   75 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            56778999999999999998 6788999999875332111    112345688999999999999999999873

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.30  E-value=2e-06  Score=73.80  Aligned_cols=61  Identities=28%  Similarity=0.384  Sum_probs=50.3

Q ss_pred             cccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          197 PLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       197 ~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .||+|+||.||+|.+   .++..+|+|.+....   ........+..|+.++..++||||++++|++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   65 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN---NDPALKDELLREANVMQQLDNPYIVRMIGIC   65 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCC---CcHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            589999999999975   457789999987432   2344567899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.30  E-value=1.4e-06  Score=75.22  Aligned_cols=64  Identities=25%  Similarity=0.372  Sum_probs=52.9

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+|.+.+.||+|+||.||+|.+.....||+|.+....      .....+.+|+.++..++||||+++++.
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~~~   69 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT------MSPEAFLQEAQVMKKLRHEKLVQLYAV   69 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc------cCHHHHHHHHHHHHhCCCCCcceEEEE
Confidence            4688999999999999999988444579999987522      123568899999999999999999886

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.30  E-value=2.5e-06  Score=72.80  Aligned_cols=66  Identities=23%  Similarity=0.415  Sum_probs=56.0

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +|...+.||+|+||.||++.. .++..+|+|.+.....   .......+.+|+.+|+.++||||+++++.
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~   67 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM---TKDERLAAQNECQVLKLLSHPNIIEYYEN   67 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc---ccHHHHHHHHHHHHHhhCCCCchhheeee
Confidence            478889999999999999998 7888999999986332   33445778999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.30  E-value=1.6e-06  Score=74.10  Aligned_cols=65  Identities=23%  Similarity=0.326  Sum_probs=53.9

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||.|+||.||++.+..+..+|+|.+....      .....+..|+.++..++||||+++++++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA------MSEEDFIEEAQVMMKLSHPKLVQLYGVC   68 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC------CCHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            4678889999999999999988557789999887422      1234688999999999999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.30  E-value=1.9e-06  Score=75.06  Aligned_cols=64  Identities=30%  Similarity=0.552  Sum_probs=54.3

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |...+.||.|+||.||+|.+ .++..+++|.+..     ........+.+|+.++..++||||+++++.+
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~-----~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~   71 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDT-----KSEEELEDYMVEIDILASCDHPNIVKLLDAF   71 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCC-----CCHHHHHHHHHHHHHHHHCCCCCeeeEEEEE
Confidence            56678899999999999998 6788899999864     2344567789999999999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.30  E-value=2.1e-06  Score=74.89  Aligned_cols=67  Identities=28%  Similarity=0.467  Sum_probs=52.5

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCC----eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGF----FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||+|.+ .+|.    .+++|.+...    ........+..|+.++..++|||||+++|++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~   78 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR----SGRQTFQEITDHMLAMGSLDHAYIVRLLGIC   78 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc----cchHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence            4678889999999999999998 5555    3677776531    1234456788899999999999999999984

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.30  E-value=1.7e-06  Score=77.02  Aligned_cols=62  Identities=26%  Similarity=0.344  Sum_probs=49.4

Q ss_pred             ccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++..    .+|..+|+|++.....   .......+..|+.+|..++||||+++++++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   67 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL---KVRDRVRTKMERDILAEVNHPFIVKLHYAF   67 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh---hhhhHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            5799999999999875    3678999999985321   222345678899999999999999998874

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.30  E-value=2.4e-06  Score=74.22  Aligned_cols=69  Identities=23%  Similarity=0.326  Sum_probs=55.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCC----eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGF----FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..+|...+.||+|+||.||+|.+ .+|.    .||+|.+...    ........+.+|+.++..+.||||+.+++.|.
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~   79 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN----TSPKANKEILDEAYVMAGVGSPYVCRLLGICL   79 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC----CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEc
Confidence            35688999999999999999987 4554    4899998742    13444567889999999999999999998753

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.30  E-value=2.5e-06  Score=72.70  Aligned_cols=62  Identities=31%  Similarity=0.482  Sum_probs=50.7

Q ss_pred             ccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          196 APLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ++||.|+||.||+|....+..+|+|.+...    ........+.+|+.++..++||||+++++.|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   62 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKED----LPQELKIKFLSEARILKQYDHPNIVKLIGVCT   62 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCc----CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe
Confidence            368999999999998766788999998742    12334457889999999999999999998854

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.29  E-value=2.3e-06  Score=74.88  Aligned_cols=67  Identities=25%  Similarity=0.385  Sum_probs=52.9

Q ss_pred             CeeecccccccCceeEEEEEe-c-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-D-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      +|.+.+.||+|+||.||+|.. .     ....+++|.+....    .......+.+|+.++..++||||+++++.|.
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   73 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA----SSSELRDLLSEFNLLKQVNHPHVIKLYGACS   73 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC----CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe
Confidence            367789999999999999986 2     22468898887421    3344567899999999999999999998743

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.29  E-value=2.8e-06  Score=74.05  Aligned_cols=65  Identities=34%  Similarity=0.436  Sum_probs=52.5

Q ss_pred             eeecccccccCceeEEEEEe-----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |...+.||+|+||.||.+.+     ..+..||+|.+....    .......+.+|+.+|+.++||||+++++++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   75 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC----GQQNTSGWKKEINILKTLYHENIVKYKGCC   75 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            37789999999999988653     467789999987521    233456788999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.29  E-value=2.5e-06  Score=74.17  Aligned_cols=66  Identities=29%  Similarity=0.592  Sum_probs=55.8

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||.|+||.||+|.+ .++..||+|.+....    .......+.+|+.+++.++||||+++++.+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSPYVTKYYGSY   71 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc----cHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            466788999999999999998 678899999987521    244567889999999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.29  E-value=1.5e-06  Score=82.35  Aligned_cols=63  Identities=30%  Similarity=0.469  Sum_probs=55.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CC-----Cceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HD-----NIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-Hp-----NIV~l~g~  259 (264)
                      .|.+.++||+|+||.|.+|.+ .+++.||||+++.      ......+..-|+.||..|+ |.     |+|+++++
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN------~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~  256 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN------KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDY  256 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeecc------ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeec
Confidence            688999999999999999999 8899999999985      4556677889999999997 42     89999998

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.29  E-value=5.7e-07  Score=85.60  Aligned_cols=69  Identities=26%  Similarity=0.465  Sum_probs=59.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..-|.+++.||.|+-|.|..|.+ .+|+.+|||++.+...  ........+.+||.||+-+.||||++||++
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~--~s~s~~~~IerEIviMkLi~HpnVl~LydV   80 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSE--LSSSQPAGIEREIVIMKLIEHPNVLRLYDV   80 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccc--cccccccchhhhhHHHHHhcCCCeeeeeee
Confidence            45689999999999999999999 9999999999987421  234445678999999999999999999998

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.29  E-value=2.7e-06  Score=75.70  Aligned_cols=67  Identities=25%  Similarity=0.436  Sum_probs=56.1

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |...+.||+|+||.||++.+ .+|..+|+|.+.....  ........+..|+.+++.++|||+|++++++
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   94 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK--QSNEKWQDIIKEVKFLQRIKHPNSIEYKGCY   94 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCC--CchHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            67788999999999999998 7788999999875322  2334456789999999999999999999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.29  E-value=1.7e-06  Score=76.59  Aligned_cols=59  Identities=25%  Similarity=0.451  Sum_probs=48.1

Q ss_pred             cccccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          195 GAPLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +..||+|+||.||+|..   ..+..||+|.+....       ....+.+|+.+|..++||||+++++++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~   67 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-------ISMSACREIALLRELKHPNVIALQKVF   67 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-------CcHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            46899999999999987   255789999987421       123578999999999999999998874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.29  E-value=2.2e-06  Score=74.24  Aligned_cols=67  Identities=28%  Similarity=0.494  Sum_probs=55.3

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      |...+.||.|+||.||+|.+ .+|..+|+|.+....   ........+.+|+.++..++|||++++++++.
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   68 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN---EKEGFPITAIREIKLLQKLRHPNIVRLKEIVT   68 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc---ccccchHHHHHHHHHHHhccCCCeeeheeeEe
Confidence            56778999999999999998 678899999998632   12333467889999999999999999998853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.28  E-value=2.4e-06  Score=77.53  Aligned_cols=61  Identities=18%  Similarity=0.113  Sum_probs=51.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .++..||+|.....           ....|+.++..++|||||++++++
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----------~~~~E~~~l~~l~h~~iv~~~~~~  126 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----------TTLIEAMLLQNVNHPSVIRMKDTL  126 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----------ccHHHHHHHHhCCCCCCcChhheE
Confidence            45799999999999999999999 67789999975531           235699999999999999999874

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.28  E-value=2e-06  Score=77.11  Aligned_cols=63  Identities=14%  Similarity=0.162  Sum_probs=51.0

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++.+ .++..||+|.+.....  ........+..|+.++..+ +||||+++++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~   65 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV--NDDEDIDWVQTEKHVFETASNHPFLVGLHSCF   65 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCCCCceEEEE
Confidence            3689999999999998 7889999999986322  1233456688999999888 799999999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.28  E-value=1.6e-06  Score=75.65  Aligned_cols=67  Identities=21%  Similarity=0.357  Sum_probs=55.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      ++|.....||+|+||.||++.+ .+|..+|+|.+....    .......+..|+.++.++. |||||++++++
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~   72 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTV----DEKEQKRLLMDLDVVMRSSDCPYIVKFYGAL   72 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhcc----ChHHHHHHHHHHHHHHHhcCCCCEeeeeeEE
Confidence            3566778999999999999998 778999999987532    2244567889999999996 99999999873

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.28  E-value=2.1e-06  Score=75.74  Aligned_cols=68  Identities=25%  Similarity=0.416  Sum_probs=55.2

Q ss_pred             CeeecccccccCceeEEEEEe-c--CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-D--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~--~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|.....||+|+||.||+|.+ .  .+..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE--QYTGISQSACREIALLRELKHENVVSLVEVF   71 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc--cccCccHHHHHHHHHHHhcCCCCccceEEEE
Confidence            367888999999999999999 5  688999999986321  1123345678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.28  E-value=2.5e-06  Score=75.20  Aligned_cols=66  Identities=21%  Similarity=0.409  Sum_probs=56.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||.|+||.||+|.+ .+|..|++|.+...     .......+.+|+.+++.++||||+.+++.+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   85 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ-----KQPKKELIINEILVMKELKNPNIVNFLDSF   85 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc-----cCchHHHHHHHHHHHHhcCCCceeeeeeeE
Confidence            4689999999999999999998 78899999998752     223346788999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.28  E-value=1.8e-06  Score=74.14  Aligned_cols=66  Identities=26%  Similarity=0.360  Sum_probs=55.9

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||++.+ .++..+|+|.+....    .......+.+|+.+++.++||||+++++.+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   68 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI----NEAIQKQILRELDILHKCNSPYIVGFYGAF   68 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc----ChHHHHHHHHHHHHHHHCCCCchhhhheee
Confidence            577788999999999999999 678999999987632    234557789999999999999999998874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.28  E-value=2.4e-06  Score=73.82  Aligned_cols=61  Identities=25%  Similarity=0.355  Sum_probs=48.5

Q ss_pred             ccccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+   .++..+|+|.+....    .......+.+|+.++..++||||+++++++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   64 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA----SVQEQMKFLEEAQPYRSLQHSNLLQCLGQC   64 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCC----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3589999999999986   244579999887522    233345788999999999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.28  E-value=1.9e-06  Score=75.22  Aligned_cols=60  Identities=22%  Similarity=0.262  Sum_probs=48.6

Q ss_pred             ccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       198 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ||+|+||.||++.+ .+|..||+|.+.....  ........+..|+.+|..++||||+.++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~   61 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRL--KKRKGYEGAMVEKRILAKVHSRFIVSLAYA   61 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHH--hhhHHHHHHHHHHHHHHhCCCCcEeeeeEE
Confidence            69999999999998 7889999999975321  122234567889999999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.28  E-value=1.9e-06  Score=75.37  Aligned_cols=69  Identities=28%  Similarity=0.398  Sum_probs=55.6

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~~  261 (264)
                      ++|...+.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..+. ||||+++++++.
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~---~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~   71 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD---EEGIPPTALREISLLQMLSESIYIVRLLDVEH   71 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc---ccCCchHHHHHHHHHHHccCCCCccceeeeEe
Confidence            3688899999999999999998 7789999999875321   2223356788999999995 699999998753

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.28  E-value=2.8e-06  Score=75.01  Aligned_cols=69  Identities=20%  Similarity=0.232  Sum_probs=56.7

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .++..|++|.+.....  ........+..|+.++..++||||+++++.+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   70 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL--ILRNQIQQVFVERDILTFAENPFVVSMFCSF   70 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh--hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE
Confidence            3688899999999999999998 7788999999875321  1233456788999999999999999999873

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.28  E-value=9.8e-07  Score=79.55  Aligned_cols=68  Identities=26%  Similarity=0.345  Sum_probs=54.4

Q ss_pred             CCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~~  261 (264)
                      +.|.+.+.||+|+||.||+|.+      .++..||+|.+....    .......+..|+.++.++ +||||++++++|.
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~   81 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA----TASEYKALMTELKILIHIGHHLNVVNLLGACT   81 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC----CHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence            4688899999999999999974      234689999987421    233456788999999999 8999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.28  E-value=1.7e-06  Score=74.21  Aligned_cols=65  Identities=26%  Similarity=0.270  Sum_probs=52.9

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||++.+..+..+|+|.+....      .....+.+|+.++..++||||+++++++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA------MSEDDFIEEAKVMMKLSHPNLVQLYGVC   68 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC------CCHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            3577889999999999999988556689999986421      1234678899999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.27  E-value=2.2e-06  Score=76.59  Aligned_cols=63  Identities=21%  Similarity=0.197  Sum_probs=50.9

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++.+ .+|..||+|.+.....  ........+..|+.++..++||||+++++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~   64 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTALKYSF   64 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence            3689999999999998 7889999999985321  1233456678899999999999999998763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.27  E-value=1.4e-06  Score=78.16  Aligned_cols=68  Identities=22%  Similarity=0.324  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||.|+||.||+|.. .+|..||+|.+.....   .......+.+|+.+|..++||||++++++
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   72 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD---VPTLAKRTLRELKILRHFKHDNIIAIRDI   72 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc---cccchHHHHHHHHHHHhcCCCCccCHHHh
Confidence            36789999999999999999998 7899999999875321   22345677889999999999999998875

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.27  E-value=3.8e-06  Score=73.98  Aligned_cols=67  Identities=22%  Similarity=0.397  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||.|+||.||+|.. .++..||+|.+....     ......+.+|+.++..++||||+++++.+
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~-----~~~~~~~~~e~~~l~~~~h~~v~~~~~~~   86 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-----QPKKELIINEILVMRENKNPNIVNYLDSY   86 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC-----cchHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            35788899999999999999998 778899999997532     22346688999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.27  E-value=2.3e-06  Score=75.25  Aligned_cols=66  Identities=26%  Similarity=0.428  Sum_probs=55.4

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|...+.||.|+||.||++.. .++..||+|.+...     .......+.+|+.+++.++||||+++++.+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-----~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~   85 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ-----QQPKKELIINEILVMRENKHPNIVNYLDSY   85 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc-----cchHHHHHHHHHHHHhhcCCCCeeehhhee
Confidence            5688899999999999999987 67889999998642     222346788999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.27  E-value=1.3e-06  Score=74.91  Aligned_cols=66  Identities=23%  Similarity=0.406  Sum_probs=55.7

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||.|+||.||+|.+..+..+|+|.+...     .......+..|+.++..++||||+++++++
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   71 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD-----DLLKQQDFQKEVQALKRLRHKHLISLFAVC   71 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecCCCcEEEEecccc-----chhhHHHHHHHHHHHhcCCCcchhheeeeE
Confidence            467889999999999999999955889999998752     233456788999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.27  E-value=2.9e-06  Score=72.93  Aligned_cols=66  Identities=23%  Similarity=0.495  Sum_probs=56.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|...+.||.|+||.||+|.+ .++..+++|.+...      ......+.+|+.++.++ .||||+++++.+
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   72 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDII------EDEEEEIKEEYNILRKYSNHPNIATFYGAF   72 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecC------chhHHHHHHHHHHHHHhcCCCChheEEEEE
Confidence            57899999999999999999998 67889999998752      22346789999999999 699999999885

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.27  E-value=1.4e-06  Score=78.08  Aligned_cols=69  Identities=20%  Similarity=0.327  Sum_probs=56.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..+|+|.+.....   .......+.+|+.++..+ +||||+++++++
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~---~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~   76 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR---NATDAQRTFREIMFLQELGDHPNIVKLLNVI   76 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC---cchhhhhhhHHHHHHHHhcCCCCccceeeee
Confidence            56788899999999999999998 6788999999864221   223345677899999999 999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.27  E-value=1.4e-06  Score=75.86  Aligned_cols=67  Identities=22%  Similarity=0.311  Sum_probs=53.5

Q ss_pred             CCeeecccccccCceeEEEEEe-c-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-D-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||.|+||.||+|.+ .     .+..||+|.+....    .......+..|+.++..++|||||++++++
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~   77 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA----EGPLREEFKHEAMMRSRLQHPNIVCLLGVV   77 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC----CHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence            3467788999999999999987 2     24679999997421    233456788999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.26  E-value=2.5e-06  Score=74.18  Aligned_cols=68  Identities=32%  Similarity=0.439  Sum_probs=55.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-c-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .     .+..||+|.+...    ........+..|+.++..++||||+++++++
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~----~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   78 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES----CSEQDESDFLMEALIMSKFNHQNIVRLIGVS   78 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC----CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            45688999999999999999998 4     5678999988642    1233446789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.26  E-value=1.9e-06  Score=75.74  Aligned_cols=67  Identities=21%  Similarity=0.288  Sum_probs=53.5

Q ss_pred             CCeeecccccccCceeEEEEEe-cC--------------CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCce
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DD--------------GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV  254 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~--------------g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV  254 (264)
                      .+|.+.+.||+|+||.||.|.. ..              ...||+|.+....    .......+.+|+.+|..++||||+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~i~   80 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV----TKTARNDFLKEIKIMSRLKNPNII   80 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC----CHHHHHHHHHHHHHHHhCCCCCcC
Confidence            4688899999999999999876 21              2358999987521    334456789999999999999999


Q ss_pred             eeeeee
Q 024683          255 QYFGTE  260 (264)
Q Consensus       255 ~l~g~~  260 (264)
                      ++++++
T Consensus        81 ~~~~~~   86 (295)
T cd05097          81 RLLGVC   86 (295)
T ss_pred             eEEEEE
Confidence            999874

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.26  E-value=1.8e-06  Score=77.19  Aligned_cols=64  Identities=23%  Similarity=0.343  Sum_probs=49.6

Q ss_pred             ccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++..    ..+..||+|.+...... ........+..|+.+|..++||||+++++++
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~   69 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV-RNQKDTAHTKAERNILEAVKHPFIVDLIYAF   69 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH-hhhhhHHHHHHHHHHHHhCCCCchhceeeEE
Confidence            5799999999999986    35789999999752210 1123345678999999999999999998773

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.26  E-value=1.8e-06  Score=75.00  Aligned_cols=66  Identities=32%  Similarity=0.495  Sum_probs=54.1

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |...+.||.|++|.||+|.+ .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~   67 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE---DEGVPSTAIREISLLKELNHPNIVRLLDVV   67 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc---cccchhHHHHHHHHHHhcCCCCccCHhhee
Confidence            45678899999999999998 7899999999986322   222335678899999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.25  E-value=2.9e-06  Score=74.18  Aligned_cols=68  Identities=26%  Similarity=0.493  Sum_probs=56.8

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ...++|.....||+|+||.||++.. .++..+|+|.+...      ......+.+|+.++..+ +||||+++++++
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~------~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~   88 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI------SDVDEEIEAEYNILQSLPNHPNVVKFYGMF   88 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc------ccHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence            3467899999999999999999998 78899999998741      22235678899999998 799999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.25  E-value=4.1e-07  Score=85.40  Aligned_cols=71  Identities=18%  Similarity=0.379  Sum_probs=58.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCC---CCcChHHHHHHHHHHHHHhcCC---CCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQ---GTQGEQSVLQLEQEISLLGQFE---HDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~~~~~~Ei~iL~~l~---HpNIV~l~g~  259 (264)
                      ..+|.....+|+|+||.|+.|.+ .....|+||.|.+++.   .+........+..||.||..++   |+||++++++
T Consensus       560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf  637 (772)
T KOG1152|consen  560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF  637 (772)
T ss_pred             cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence            45789999999999999999999 6678899999987653   1222334556789999999998   9999999987

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.25  E-value=4.2e-06  Score=71.48  Aligned_cols=66  Identities=30%  Similarity=0.432  Sum_probs=55.3

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +|...+.||.|+||.||.+.. .++..||+|.+....   ........+..|+.+++.++||||+++++.
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   67 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRN---ASRRERKAAEQEAQLLSQLKHPNIVAYRES   67 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhh---cCHHHHHHHHHHHHHHHhCCCCCeeeeeee
Confidence            478899999999999999998 678899999997532   133445678899999999999999998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.25  E-value=3.1e-06  Score=73.28  Aligned_cols=68  Identities=26%  Similarity=0.390  Sum_probs=54.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC-----CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD-----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~-----g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ ..     +..||+|.+...    ........+.+|+.+|..++||||+++++++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~----~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   78 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNEN----ASMRERIEFLNEASVMKEFNCHHVVRLLGVV   78 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCc----cCHHHHHHHHHHHHHHHhCCCCceeEEEEEE
Confidence            35788899999999999999987 22     367999998642    1234456788999999999999999999973

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.25  E-value=2.8e-06  Score=73.60  Aligned_cols=68  Identities=32%  Similarity=0.394  Sum_probs=55.3

Q ss_pred             CCeeecccccccCceeEEEEEe-c----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-D----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..|...+.||+|+||.||++.+ .    ++..+|+|.+....    .......+.+|+.++..+.||||+++++++.
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~----~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~   76 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSG----EEQHRSDFEREIEILRTLDHENIVKYKGVCE   76 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEecccc----chHHHHHHHHHHHHHHhCCCCChheEEeeee
Confidence            3567789999999999999986 2    36789999998532    1135678999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.25  E-value=3.7e-06  Score=74.51  Aligned_cols=69  Identities=20%  Similarity=0.307  Sum_probs=57.3

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||.|+||.||+|.. .++..+|+|.+.....  ........+..|+.++..++||||+++++.+
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   70 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEM--IKRNKVKRVLTEQEILATLDHPFLPTLYASF   70 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEecccc--chHHHHHHHHHHHHHHHhCCCCCchhheeee
Confidence            3688899999999999999998 6789999999986322  1223556789999999999999999998873

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.25  E-value=3.2e-06  Score=72.92  Aligned_cols=69  Identities=29%  Similarity=0.441  Sum_probs=55.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCC---eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGF---FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~---~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.. .++.   .+|+|.+...    ........+..|+.++..++||||+++++++.
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPG----YTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT   76 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEecccc----CCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc
Confidence            34678889999999999999998 3443   6899988742    12344567899999999999999999998843

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.24  E-value=3.6e-07  Score=86.31  Aligned_cols=68  Identities=28%  Similarity=0.545  Sum_probs=57.5

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .....+||+|+|-+||+|.+ .+|..||.-.++..+.. ..+.....|..|+.+|+.|+|||||++|+++
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~-q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW  110 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVT-QSPEELERLYSEVHLLKSLKHPNIIRFYDSW  110 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhh-cChHHHHHHHHHHHHHccCCCCceeeeeehe
Confidence            34567899999999999999 88999998887764432 3566778999999999999999999999873

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.24  E-value=2.8e-06  Score=76.22  Aligned_cols=69  Identities=16%  Similarity=0.112  Sum_probs=55.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .++..+|+|.+.....  ........+..|+.++..++||||+.+++++
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   70 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM--LKRAETACFREERDVLVNGDNQWITTLHYAF   70 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH--HHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE
Confidence            3688899999999999999998 6788999999974211  1222344578899999999999999998763

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.24  E-value=3.3e-06  Score=74.64  Aligned_cols=68  Identities=22%  Similarity=0.366  Sum_probs=53.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCe--EEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFF--FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~--vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..  +|+|.+...    ........+.+|+.++..+ +||||+++++++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~   77 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----ASKDDHRDFAGELEVLCKLGHHPNIINLLGAC   77 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc----CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence            45788999999999999999998 55554  577766531    1334456788999999999 899999999874

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.24  E-value=5.1e-06  Score=70.42  Aligned_cols=67  Identities=46%  Similarity=0.851  Sum_probs=56.6

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||+|+||.||+|.. .++..|++|.+.....   .......+.+|+.++++++||||+++++.+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD---SEEELEALEREIRILSSLQHPNIVRYYGSE   68 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc---chHHHHHHHHHHHHHHHcCCCCEeeEEEEE
Confidence            367789999999999999999 6789999999986321   235567899999999999999999998874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.23  E-value=2.8e-06  Score=73.81  Aligned_cols=67  Identities=27%  Similarity=0.384  Sum_probs=54.4

Q ss_pred             CCeeecccccccCceeEEEEEe-cCC-----CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDG-----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g-----~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||+|.+ ..+     ..||+|.+...    ........+.+|+.++..++||||+++++++
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~----~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~   77 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN----AEPKVQQEFRQEAELMSDLQHPNIVCLLGVC   77 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC----CCHHHHHHHHHHHHHHHhcCCcccceEEEEE
Confidence            4678899999999999999987 333     57999998742    1334456789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.23  E-value=3e-06  Score=73.86  Aligned_cols=61  Identities=21%  Similarity=0.240  Sum_probs=47.9

Q ss_pred             ccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       198 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ||+|+||.||++.. .+|..+|+|.+.....  ........+..|+.++..++||||+++++.+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~   62 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRL--KKKSGEKMALLEKEILEKVNSPFIVNLAYAF   62 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHh--hcchhhHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence            69999999999998 7789999999974221  1112234566799999999999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.23  E-value=2e-06  Score=74.59  Aligned_cols=67  Identities=31%  Similarity=0.511  Sum_probs=54.4

Q ss_pred             CCeeecccccccCceeEEEEEe-c-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-D-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|.+.+.||+|+||.||+|.+ .     .+..||+|.+....    .......+.+|+.+|..++||||+++++++
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   77 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA----SNDARKDFEREAELLTNFQHENIVKFYGVC   77 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC----CHHHHHHHHHHHHHHHhcCCCCchheeeEE
Confidence            4578889999999999999986 2     24689999987521    233457899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.23  E-value=3e-06  Score=73.59  Aligned_cols=69  Identities=26%  Similarity=0.426  Sum_probs=55.0

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||.|.+      ..+..||+|.+...    ........+.+|+.++..++||||+++++++.
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~----~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~   79 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA----ASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   79 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            45689999999999999999875      13467999998642    12334567899999999999999999998743

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.23  E-value=4.1e-06  Score=71.46  Aligned_cols=64  Identities=33%  Similarity=0.590  Sum_probs=55.5

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||.|+||.||+|.+ .++..+++|.+...       .....+.+|+.+++.++||||+++++.+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~-------~~~~~~~~e~~~~~~l~~~~i~~~~~~~   67 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE-------EDLQEIIKEISILKQCDSPYIVKYYGSY   67 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH-------HHHHHHHHHHHHHHhCCCCcEeeeeeee
Confidence            5788899999999999999999 66889999998741       1257899999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.22  E-value=3.3e-06  Score=75.73  Aligned_cols=63  Identities=17%  Similarity=0.182  Sum_probs=50.4

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++.+ .++..||+|.+.....  ........+..|+.++..+ +|||||++++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~   65 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELV--NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF   65 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHh--cchhHHHHHHHHHHHHHhcCCCCcCCceeeEE
Confidence            3689999999999998 7788999999986322  1234456688899988776 799999999873

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.22  E-value=3e-06  Score=72.88  Aligned_cols=64  Identities=23%  Similarity=0.357  Sum_probs=52.5

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ++|.....||+|+||.||++.+..+..+|+|.+...      ......+.+|+.++..++||||++++++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~   69 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG------TMMPEAFLQEAQIMKKLRHDKLVPLYAV   69 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC------CccHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence            457888999999999999998854557999988642      1223568899999999999999999886

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.22  E-value=4.3e-06  Score=79.10  Aligned_cols=65  Identities=18%  Similarity=0.168  Sum_probs=54.0

Q ss_pred             CeeecccccccCceeEEEEEe-cC-CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~-g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||.+.. .+ +..||+|.+..     ........+.+|+.+|..++|||||++++++
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~-----~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~  134 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVML-----NDERQAAYARSELHCLAACDHFGIVKHFDDF  134 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEccc-----CCHHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            488999999999999999988 44 67889997754     2344456678899999999999999999974

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.22  E-value=3.2e-06  Score=73.97  Aligned_cols=69  Identities=26%  Similarity=0.370  Sum_probs=55.2

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cC-----CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DD-----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~-----g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||++.+ ..     ...+|+|.+...    ........+.+|+.++..+ +||||+++++++
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   85 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC   85 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC----CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            345788999999999999999987 22     257999998752    1334456789999999999 799999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.21  E-value=3.9e-06  Score=72.52  Aligned_cols=67  Identities=28%  Similarity=0.413  Sum_probs=54.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cC---CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|.+.+.||.|+||.||+|.+ ..   ...||+|.....    ........+.+|+.++..++||||+++++++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~----~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   76 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC----TSPSVREKFLQEAYIMRQFDHPHIVKLIGVI   76 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCc----CCHHHHHHHHHHHHHHHhCCCCchhceeEEE
Confidence            4578889999999999999987 32   246899988742    1244566899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.21  E-value=6.1e-06  Score=70.62  Aligned_cols=67  Identities=27%  Similarity=0.384  Sum_probs=56.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||.|+||.||++.+ .++..|++|.+....    .......+.+|+.++..++||||+++++.+
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG----DEEFRKQLLRELKTLRSCESPYVVKCYGAF   68 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc----chHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            3678889999999999999999 678999999998632    224567899999999999999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.21  E-value=4.1e-06  Score=72.10  Aligned_cols=60  Identities=25%  Similarity=0.391  Sum_probs=48.4

Q ss_pred             cccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          197 PLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       197 ~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .||+|+||.||+|.+   ..+..||+|.+...    ........+.+|+.++..++||||++++++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~----~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~   64 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE----NEKSVRDEMMREAEIMHQLDNPYIVRMIGVC   64 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccc----cChHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence            389999999999977   34456999998752    1234456789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.21  E-value=3e-06  Score=74.43  Aligned_cols=67  Identities=19%  Similarity=0.287  Sum_probs=53.5

Q ss_pred             CCeeecccccccCceeEEEEEe-----------------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCC
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-----------------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN  252 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-----------------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN  252 (264)
                      ++|.+.+.||+|+||.||++.+                 ..+..+|+|.+...    ........+.+|+.+|..++|||
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~~~E~~~l~~l~~~~   80 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED----ANKNARNDFLKEIKIMSRLKDPN   80 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCC
Confidence            4588999999999999999854                 12346899998752    13344568899999999999999


Q ss_pred             ceeeeeee
Q 024683          253 IVQYFGTE  260 (264)
Q Consensus       253 IV~l~g~~  260 (264)
                      |+++++++
T Consensus        81 i~~~~~~~   88 (296)
T cd05095          81 IIRLLAVC   88 (296)
T ss_pred             cceEEEEE
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.21  E-value=3.7e-06  Score=73.38  Aligned_cols=67  Identities=31%  Similarity=0.439  Sum_probs=54.6

Q ss_pred             CeeecccccccCceeEEEEEe-----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .|...+.||+|+||.||.+.+     .++..||+|.+...    ........+.+|+.+++.++||||+++++++.
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE----SGGNHIADLKKEIEILRNLYHENIVKYKGICT   76 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc----ccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEe
Confidence            467889999999999999974     35778999998742    13444567999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.21  E-value=3.6e-06  Score=73.19  Aligned_cols=66  Identities=27%  Similarity=0.535  Sum_probs=55.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ...|.....||.|+||.||+|.+ ..+..+|+|.+..      .......+..|+.++..+ +||||+++++++
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~------~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   82 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDV------TEDEEEEIKLEINMLKKYSHHRNIATYYGAF   82 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEec------ChHHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence            46778889999999999999999 7788999999875      223345688999999988 699999998875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.20  E-value=1.4e-06  Score=76.97  Aligned_cols=68  Identities=19%  Similarity=0.213  Sum_probs=58.5

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF  257 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~  257 (264)
                      ..++|..+++||+|.||+|.+|.. .+|..+|+|+++++..  ........-..|-.+|..++||.+..|.
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi--iakdEVAHTlTE~RVL~~~~HPFLt~LK  234 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI--IAKDEVAHTLTENRVLQNCRHPFLTSLK  234 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe--eehHHhhhhhhHHHHHHhccCcHHHHhh
Confidence            468999999999999999999998 8899999999997543  3455667788999999999999987663

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.19  E-value=8.1e-06  Score=69.33  Aligned_cols=67  Identities=40%  Similarity=0.758  Sum_probs=56.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||+|+||.||++.. ..+..+++|.+.....   .......+.+|+.++..++|||++++++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI---KEEALKSIMQEIDLLKNLKHPNIVKYIGSI   68 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc---CHHHHHHHHHHHHHHHhCCCCCccEEEEEE
Confidence            467889999999999999998 6788999999986322   234567899999999999999999998874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.19  E-value=4.4e-06  Score=72.39  Aligned_cols=66  Identities=30%  Similarity=0.603  Sum_probs=54.6

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC---CCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE---HDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~---HpNIV~l~g~~  260 (264)
                      .|+..+.||.|+||.||+|.+ .++..||+|.+....    .......+.+|+.++..++   |||++++++++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~   71 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT----PDDDVSDIQREVALLSQLRQSQPPNITKYYGSY   71 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC----CchhHHHHHHHHHHHHHhccCCCCCeeeEeeee
Confidence            467788999999999999998 788999999987521    2334567889999999986   99999999874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.18  E-value=5.4e-06  Score=71.59  Aligned_cols=60  Identities=27%  Similarity=0.376  Sum_probs=46.9

Q ss_pred             cccccCceeEEEEEe-c--CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          197 PLGSGSFGSVYEGFT-D--DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       197 ~lG~G~fG~Vy~~~~-~--~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .||+|+||.||+|.. .  ....+++|.+...    ........+.+|+.+++.++||||+++++.|
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~   64 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS----ATPDEQLLFLQEVQPYRELNHPNVLQCLGQC   64 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCcc----CChHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            589999999999976 2  3456888877642    1334456788999999999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.18  E-value=6.7e-06  Score=73.07  Aligned_cols=67  Identities=28%  Similarity=0.441  Sum_probs=54.9

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |.....||.|+||.||+|.. .+|..|++|.+.....  ........+..|+.++..++|||++++++++
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   90 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK--QTNEKWQDIIKEVKFLQQLKHPNTIEYKGCY   90 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc--CchHHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence            55567899999999999998 7788999999975322  1334456788999999999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.18  E-value=3e-06  Score=73.82  Aligned_cols=60  Identities=20%  Similarity=0.274  Sum_probs=46.3

Q ss_pred             cccccCceeEEEEEe-cC------------------------CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCC
Q 024683          197 PLGSGSFGSVYEGFT-DD------------------------GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD  251 (264)
Q Consensus       197 ~lG~G~fG~Vy~~~~-~~------------------------g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~Hp  251 (264)
                      .||+|+||.||+|.+ ..                        ...|++|.+...     .......+..|+.+++.++||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~l~h~   76 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS-----HRDIALAFFETASLMSQVSHI   76 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH-----HHHHHHHHHHHHHHHhcCCCC
Confidence            689999999999975 11                        135888888641     233345688899999999999


Q ss_pred             Cceeeeeeee
Q 024683          252 NIVQYFGTEK  261 (264)
Q Consensus       252 NIV~l~g~~~  261 (264)
                      ||++++++|.
T Consensus        77 niv~~~~~~~   86 (274)
T cd05076          77 HLAFVHGVCV   86 (274)
T ss_pred             CeeeEEEEEE
Confidence            9999999853

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.17  E-value=4.9e-06  Score=72.82  Aligned_cols=68  Identities=29%  Similarity=0.377  Sum_probs=53.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-c-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.. .     .+..||+|.+....    .......+.+|+.++..++||||+++++++
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   78 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA----SLRERIEFLNEASVMKGFTCHHVVRLLGVV   78 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            45788999999999999999875 1     24579999886421    233345688999999999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.17  E-value=5.8e-06  Score=74.04  Aligned_cols=67  Identities=21%  Similarity=0.311  Sum_probs=53.5

Q ss_pred             CeeecccccccCceeEEEEEe-cC--CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DD--GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~--g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      +|...+.||+|+||.||++.+ ..  +..||+|.+.....   .......+.+|+.++..+ .||||+++++.+
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   71 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS---KKILAKRALRELKLLRHFRGHKNITCLYDMD   71 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc---cchhHHHHHHHHHHHHHhcCCCChheeeeee
Confidence            477889999999999999998 55  78999999874211   223346678999999999 599999999863

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.17  E-value=5.1e-06  Score=70.72  Aligned_cols=65  Identities=31%  Similarity=0.509  Sum_probs=53.2

Q ss_pred             eecccccccCceeEEEEEe-cCC----CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFT-DDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~-~~g----~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+.+.||.|+||.||++.+ ..+    ..||+|.+....    .......+..|+.++..++||||+++++.+.
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~   71 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA----DEQQIEEFLREARIMRKLDHPNIVKLLGVCT   71 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC----ChHHHHHHHHHHHHHHhcCCCchheEEEEEc
Confidence            4568899999999999998 444    789999997521    2225678999999999999999999998754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.17  E-value=4.1e-06  Score=74.69  Aligned_cols=63  Identities=24%  Similarity=0.204  Sum_probs=49.8

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++.+ .++..||+|.+.....  ........+..|+.++..+ +||||+++++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~   65 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI--LQDDDVECTMTEKRVLALAGKHPFLTQLHSCF   65 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhHHHHHHHHHHHHHhccCCCCccceeeEE
Confidence            3689999999999998 6788999999985321  1223445677899999877 699999999873

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.17  E-value=5.3e-06  Score=71.19  Aligned_cols=61  Identities=30%  Similarity=0.474  Sum_probs=48.6

Q ss_pred             ccccccCceeEEEEEe-c---CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-D---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~---~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+ .   .+..+|+|.+...    ........+..|+.+++.++||||+++++.|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   65 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI----TDLEEVEQFLKEGIIMKDFSHPNVLSLLGIC   65 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCcc----CCHHHHHHHHHHHHHHccCCCCCcceEEEEe
Confidence            3689999999999986 2   2357999988531    1344567788999999999999999999975

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.17  E-value=3.1e-06  Score=73.12  Aligned_cols=68  Identities=22%  Similarity=0.327  Sum_probs=56.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      ++|...+.||.|+||.||++.. .+|..||+|++.....  ........+..|+.++..++ ||||+++++.
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~   70 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQL--IKEKKVKYVKIEKEVLTRLNGHPGIIKLYYT   70 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhc--cchHHHHHHHHHHHHHHhcccCCCchhHHHH
Confidence            3688899999999999999998 6889999999875322  12344567889999999998 9999999876

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.17  E-value=6.4e-06  Score=70.60  Aligned_cols=61  Identities=30%  Similarity=0.407  Sum_probs=49.4

Q ss_pred             ccccccCceeEEEEEe-cC---CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+ ..   +..+|+|.+....    .......+.+|+.++..++|||||++++++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   65 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEH----IAAGKKEFLREASVMAQLDHPCIVRLIGVC   65 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEeccccc----chHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            4699999999999987 32   3689999988532    223456789999999999999999999874

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.16  E-value=8.8e-06  Score=69.08  Aligned_cols=66  Identities=29%  Similarity=0.568  Sum_probs=55.9

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +|...+.||.|+||.||++.+ .++..+++|.+.....   .......+..|++++..++|||++++++.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~   67 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM---SEKEREDALNEVKILKKLNHPNIIKYYES   67 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC---ChHHHHHHHHHHHHHHhcCCCChhheEEE
Confidence            477889999999999999999 6789999999975322   33556778999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.15  E-value=3.6e-06  Score=72.03  Aligned_cols=63  Identities=25%  Similarity=0.452  Sum_probs=53.1

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||.|+||.||++.. .+..||+|.+...       .....+.+|+.++..++||||+++++++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~-------~~~~~~~~e~~~l~~~~~~~i~~~~~~~   68 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD-------VTAQAFLEETAVMTKLHHKNLVRLLGVI   68 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc-------chHHHHHHHHHHHHhCCCCCcCeEEEEE
Confidence            4578899999999999999886 6778999998641       1235788999999999999999999873

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.15  E-value=4.8e-06  Score=74.20  Aligned_cols=63  Identities=27%  Similarity=0.353  Sum_probs=47.4

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHH-HHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS-LLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~-iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++.+ .+|..||+|.+.....  ........+..|.. ++..++|||||++++.+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~   65 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTI--LKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF   65 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhhHHHHHHHHHHHHHHhCCCCCccceeeEE
Confidence            3689999999999999 7789999999975221  11223345566654 57889999999998763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.15  E-value=4.9e-08  Score=83.04  Aligned_cols=68  Identities=24%  Similarity=0.390  Sum_probs=58.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+.|++...||+|.|+.||+|.+ .+|+.+|+|.++....   .....+.+.+|+.|...|+|||||+|++.
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~---~~~~~e~l~rEarIC~~LqHP~IvrL~~t   78 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRKLQHPNIVRLHDS   78 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhh---ccccHHHHHHHHHHHHhcCCCcEeehhhh
Confidence            46688889999999999999999 8899999999986544   23356788999999999999999999865

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.15  E-value=5.3e-06  Score=74.01  Aligned_cols=63  Identities=21%  Similarity=0.162  Sum_probs=49.4

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+ .++..||+|++.....  ........+..|..++..+ +||||+.+++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~   65 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVI--LQDDDVDCTMTEKRILALAAKHPFLTALHCCF   65 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHh--hhhhHHHHHHHHHHHHHhccCCCCccceeeEE
Confidence            3689999999999998 7788999999975321  1233445677899998866 799999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.15  E-value=5.8e-06  Score=72.34  Aligned_cols=67  Identities=25%  Similarity=0.454  Sum_probs=54.5

Q ss_pred             CCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|.+.+.||+|+||.||++..      .++..+|+|.+..     ........+.+|+.+|..++||||+++++++.
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   77 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD-----ASDNARKDFHREAELLTNLQHEHIVKFYGVCV   77 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCC-----cCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            4688899999999999999974      2345689998874     23445667999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.15  E-value=1.7e-06  Score=78.97  Aligned_cols=64  Identities=23%  Similarity=0.283  Sum_probs=52.4

Q ss_pred             HhcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHh--cCCCCCceeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLG--QFEHDNIVQYFGT  259 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~--~l~HpNIV~l~g~  259 (264)
                      .......+.+.||+|.||.||+|.| .|..||||++...        ....+.+|.+|..  .|+|+||+.++++
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr--------dE~SWfrEtEIYqTvmLRHENILgFIaa  273 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR--------DERSWFRETEIYQTVMLRHENILGFIAA  273 (513)
T ss_pred             hhhheeEEEEEecCccccceeeccc-cCCceEEEEeccc--------chhhhhhHHHHHHHHHhccchhhhhhhc
Confidence            3345678899999999999999999 7889999999742        2256778888876  4699999999887

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.14  E-value=5.5e-06  Score=71.67  Aligned_cols=68  Identities=22%  Similarity=0.406  Sum_probs=54.5

Q ss_pred             CCeeecccccccCceeEEEEEe-c-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-D-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|.....||.|+||.||+|.. .     ....+++|.+....    .......+.+|+.++.+++||||+++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   78 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK----DENLQSEFRRELDMFRKLSHKNVVRLLGLCR   78 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc----chHHHHHHHHHHHHHHhcCCcceeeeEEEEC
Confidence            4678899999999999999986 2     24579999886421    2234567999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.14  E-value=5.3e-06  Score=73.34  Aligned_cols=68  Identities=28%  Similarity=0.417  Sum_probs=54.4

Q ss_pred             CCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~~  261 (264)
                      ++|...+.||+|+||.||++.+      ..+..||+|.+....    .......+.+|+.++.++ +||||+++++.+.
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  109 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA----HSSEREALMSELKIMSHLGNHENIVNLLGACT  109 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC----ChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence            4689999999999999999874      234579999887521    234456789999999999 7999999998854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.14  E-value=5.9e-06  Score=72.67  Aligned_cols=67  Identities=24%  Similarity=0.395  Sum_probs=53.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCC--eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGF--FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~--~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ++|.+.+.||+|+||.||+|.. .++.  .+++|.+...    ........+.+|+.++.++ +||||+++++++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~   72 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF----ASENDHRDFAGELEVLCKLGHHPNIINLLGAC   72 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc----CCHHHHHHHHHHHHHHHhhcCCCchhheEEEE
Confidence            4688899999999999999988 4443  4688887631    1334456789999999999 799999999874

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.14  E-value=7e-06  Score=73.32  Aligned_cols=67  Identities=19%  Similarity=0.141  Sum_probs=52.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCC-Cceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD-NIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~Hp-NIV~l~g~  259 (264)
                      +|...+.||+|+||.||+|.+ .++..||+|++.....  ........+..|+.++..+.|+ +|+.++++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~   69 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVI--IQDDDVECTMVEKRVLALPGKPPFLTQLHSC   69 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhcCCCCceeeeEEE
Confidence            478899999999999999998 6788999999985321  1233456688899999999765 57777765

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.14  E-value=9.4e-06  Score=74.67  Aligned_cols=62  Identities=23%  Similarity=0.232  Sum_probs=51.1

Q ss_pred             cCCeeecccccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|.+...||.|+||.||+|..   ..+..||+|.+...          ....+|+.+|..++|||||++++++
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----------~~~~~E~~il~~l~h~~iv~~~~~~  155 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----------KTPGREIDILKTISHRAIINLIHAY  155 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----------ccHHHHHHHHHhcCCCCccceeeeE
Confidence            45799999999999999999976   34578999988641          2346899999999999999998763

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.14  E-value=5.3e-06  Score=74.08  Aligned_cols=62  Identities=27%  Similarity=0.365  Sum_probs=46.8

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHH-HHhcCCCCCceeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS-LLGQFEHDNIVQYFGT  259 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~-iL~~l~HpNIV~l~g~  259 (264)
                      +.||+|+||.||+|.+ .+|..||+|.+.....  ........+..|.. ++..++|||||++++.
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~   64 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAI--LKKKEQKHIMAERNVLLKNVKHPFLVGLHYS   64 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhHHHHHHHHHHHHHhhCCCCCCCCeeEE
Confidence            3689999999999999 7899999999975321  11223345566655 4578999999999876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.13  E-value=8e-06  Score=73.00  Aligned_cols=62  Identities=26%  Similarity=0.393  Sum_probs=50.6

Q ss_pred             cccccc--CceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSG--SFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G--~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..||.|  +||.||.+.+ .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~~~~l~h~niv~~~~~~   68 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC---TEEHLKALQNEVVLSHFFRHPNIMTSWTVF   68 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcceEeeeE
Confidence            356666  9999999998 7899999999875332   334557889999999999999999999885

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.12  E-value=6.3e-06  Score=73.65  Aligned_cols=63  Identities=25%  Similarity=0.266  Sum_probs=47.5

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHH-HHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS-LLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~-iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++.+ .+|..+|+|++.....  ........+..|.. ++..++||||+++++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~   65 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIV--LNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF   65 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence            3689999999999998 7889999999975221  12233445666665 46779999999998763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.12  E-value=7.6e-06  Score=71.30  Aligned_cols=67  Identities=27%  Similarity=0.444  Sum_probs=54.5

Q ss_pred             CCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|.....||+|+||.||++..      ..+..+|+|.+..     ........+.+|+.++..++||||+++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   77 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-----ASESARQDFQREAELLTVLQHQHIVRFYGVCT   77 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc-----CCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe
Confidence            4577889999999999999864      2456899998874     23455678999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.11  E-value=7.2e-06  Score=73.37  Aligned_cols=68  Identities=21%  Similarity=0.284  Sum_probs=52.9

Q ss_pred             CeeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      +|.+.+.||+|+||.||++..    .++..||+|.+...... ........+..|+.++..+ +||||+.++++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~   73 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALV-QKAKTVEHTRTERNVLEHVRQSPFLVTLHYA   73 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHHhccCCCCcccEEEE
Confidence            478899999999999999876    36789999999752210 1223345678999999999 59999999876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.11  E-value=8.4e-06  Score=72.78  Aligned_cols=68  Identities=19%  Similarity=0.129  Sum_probs=52.6

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      +|.....||+|+||.||+|.+ .++..||+|.+.....  ........+..|..++..+ +||+|+.+++++
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~   70 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV--IQDDDVECTMVEKRVLALSGKPPFLTQLHSCF   70 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE
Confidence            478889999999999999998 6788999999985321  1223345577788888777 588999888763

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.11  E-value=1.2e-06  Score=83.98  Aligned_cols=60  Identities=35%  Similarity=0.630  Sum_probs=51.9

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      -+||+|.||+||.|++ .+...+|||.|..     ...+..+-+..||.+.+.|+|.|||+++|+|
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpe-----kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~  641 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPE-----KDSREVQPLHEEIALHSTLRHKNIVRYLGSV  641 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeeccc-----ccchhhccHHHHHHHHHHHhhHhHHHHhhcc
Confidence            4789999999999999 7777899999985     2445567788999999999999999999984

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.10  E-value=1.1e-05  Score=70.33  Aligned_cols=66  Identities=26%  Similarity=0.420  Sum_probs=56.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|.....||.|+||.||++.+ ..+..+++|.+...      ......+..|+.++..++||||+++++.+
T Consensus        18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   84 (286)
T cd06614          18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLR------KQNKELIINEILIMKDCKHPNIVDYYDSY   84 (286)
T ss_pred             cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecC------chhHHHHHHHHHHHHHCCCCCeeEEEEEE
Confidence            55688889999999999999999 57889999999852      11456788999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.10  E-value=1.5e-05  Score=67.28  Aligned_cols=65  Identities=29%  Similarity=0.532  Sum_probs=55.6

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||+|+||.||++.+ .++..+++|.+...     .......+.+|+.++..++||||+++++.+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   66 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLE-----SKEKKEKIINEIQILKKCKHPNIVKYYGSY   66 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEeccc-----chhHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            467789999999999999999 67889999999852     223567899999999999999999999874

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.10  E-value=4.8e-06  Score=73.43  Aligned_cols=64  Identities=25%  Similarity=0.365  Sum_probs=52.3

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |.....||.|+||.||++.. .++..||+|.+....     ......+.+|+.++..++||||+++++.+
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~   87 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK-----QQRRELLFNEVVIMRDYQHQNVVEMYKSY   87 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc-----cchHHHHHHHHHHHHhCCCCchhhhhhhe
Confidence            44556899999999999998 678999999997522     22345688999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.10  E-value=9.2e-06  Score=70.59  Aligned_cols=60  Identities=22%  Similarity=0.272  Sum_probs=48.3

Q ss_pred             ccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       198 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ||+|+||.||++.+ .+|..+|+|.+.....  ........+..|+.+|..++||||+.+++.
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   61 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRL--KKRKGEQMALNEKKILEKVSSRFIVSLAYA   61 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhh--hhhhhhHHHHHHHHHHHhCCCCCEeeeeeE
Confidence            69999999999988 7789999999975321  112234566789999999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.10  E-value=7.5e-06  Score=70.15  Aligned_cols=62  Identities=29%  Similarity=0.383  Sum_probs=52.8

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+|...+.||+|+||.||++.. .|..+|+|.+...       .....+.+|+.+++.++||||++++++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~-------~~~~~~~~e~~~l~~l~~~~i~~~~~~   67 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND-------ATAQAFLAEASVMTQLRHSNLVQLLGV   67 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC-------chHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence            4688899999999999999987 5778999998641       224578899999999999999999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.10  E-value=5.1e-06  Score=74.07  Aligned_cols=67  Identities=25%  Similarity=0.397  Sum_probs=55.8

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...+.||.|+||.||+|.. .+|..||+|.+....   ......+.+.+|+.++..++||||+++++++
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   68 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF---DDLIDAKRILREIKLLRHLRHENIIGLLDIL   68 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc---ccchhhhhHHHHHHHHHhcCCcchhhhhhhh
Confidence            477889999999999999998 678999999987522   1234456789999999999999999998864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.09  E-value=7.4e-06  Score=73.08  Aligned_cols=63  Identities=27%  Similarity=0.328  Sum_probs=48.1

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhc-CCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ-FEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+ .++..||+|.+.....  ........+..|..++.. ++||||+++++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~   65 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVV--LMDDDVECTMVEKRVLSLAWEHPFLTHLYCTF   65 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhcchHHHHHHHHHHHHhccCCCcCcceEEEE
Confidence            3689999999999998 7788999999985321  012234556778888875 4899999999873

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.09  E-value=4.8e-06  Score=79.32  Aligned_cols=73  Identities=25%  Similarity=0.324  Sum_probs=49.7

Q ss_pred             hcCCeeecccccccCceeEEEEEe--cCCCeEEEEEeecCCC------------CCcChHHHHHHHHHHHHHhcCCCCCc
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT--DDGFFFAVKEVSLQDQ------------GTQGEQSVLQLEQEISLLGQFEHDNI  253 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~------------~~~~~~~~~~~~~Ei~iL~~l~HpNI  253 (264)
                      ....|.+.+.||+|+||.||+|.+  ..+...++|.+.....            ..........+.+|+.+|..++||||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            357899999999999999999876  2222333332111000            00122334568899999999999999


Q ss_pred             eeeeeee
Q 024683          254 VQYFGTE  260 (264)
Q Consensus       254 V~l~g~~  260 (264)
                      |++++++
T Consensus       226 v~l~~~~  232 (501)
T PHA03210        226 LKIEEIL  232 (501)
T ss_pred             CcEeEEE
Confidence            9999874

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.09  E-value=7.7e-06  Score=72.92  Aligned_cols=62  Identities=29%  Similarity=0.346  Sum_probs=46.7

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhc-CCCCCceeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ-FEHDNIVQYFGT  259 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIV~l~g~  259 (264)
                      +.||+|+||.||+|.+ .++..||+|.+.....  ........+..|..++.. .+||||++++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~   64 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVV--LEDDDVECTMVERRVLALAWEHPFLTHLFCT   64 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhccCCCCccceeeE
Confidence            3689999999999998 7788999999985321  112334455667777764 489999999977

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.09  E-value=2.7e-06  Score=77.11  Aligned_cols=69  Identities=17%  Similarity=0.318  Sum_probs=59.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||.|..|+||++.. .++..+|+|++.+...  .......+...|-+||..++||.+++||..
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l--~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~  145 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESL--ASRKKLKRAQTEREILSLLDHPFLPTLYAS  145 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHH--hhhhHHHHHHHHHHHHHhcCCCccchhhhe
Confidence            45788999999999999999999 6678999999987544  235566788899999999999999999986

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.09  E-value=9.8e-06  Score=71.80  Aligned_cols=68  Identities=26%  Similarity=0.442  Sum_probs=55.2

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||.|+||.||+|.+ .++..+|+|.+.....  ........+..|+.+++.++|||++++++++
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   84 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY   84 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc--cChHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            366778899999999999998 6788999999875321  1234456788999999999999999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.09  E-value=9.5e-06  Score=71.72  Aligned_cols=67  Identities=27%  Similarity=0.382  Sum_probs=53.6

Q ss_pred             CCeeecccccccCceeEEEEEe-c-------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-D-------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~-------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ++|.+.+.||+|+||.||++.+ .       .+..+|+|.+....    .......+..|+.++..+ +||||++++++|
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA----TEKDLSDLISEMEMMKMIGKHKNIINLLGAC   93 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC----ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            5689999999999999999976 1       22469999987521    234456788999999999 799999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.09  E-value=2.1e-07  Score=88.20  Aligned_cols=66  Identities=26%  Similarity=0.482  Sum_probs=56.5

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.|.+...||-|+||.||++.. .++...|-|+|..     ........++-||+||..++||+||+|++++
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet-----kseEELEDylVEIeILa~CdHP~ivkLl~ay   98 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET-----KSEEELEDYLVEIEILAECDHPVIVKLLSAY   98 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc-----cchhHHhhhhhhhhhhhcCCChHHHHHHHHH
Confidence            3466778899999999999998 6777788999875     3566788899999999999999999999873

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.09  E-value=9e-06  Score=72.88  Aligned_cols=67  Identities=25%  Similarity=0.421  Sum_probs=53.3

Q ss_pred             CCeeecccccccCceeEEEEEe-c-------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-D-------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~-------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ..|.+.+.||+|+||.||.+.+ .       .+..||+|.+...    ........+.+|+.++.++ +||||++++++|
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD----ATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC   87 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc----cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence            4588999999999999999975 1       1236899988742    1334457889999999999 799999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.09  E-value=8.4e-06  Score=69.73  Aligned_cols=61  Identities=26%  Similarity=0.434  Sum_probs=49.5

Q ss_pred             ccccccCceeEEEEEe-c-CCC--eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-D-DGF--FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~-~g~--~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+ . .+.  .||+|.+.....    ......+.+|+.++++++|||||++++.+
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   65 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL----SDIMDDFLKEAAIMHSLDHENLIRLYGVV   65 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCccc----HHHHHHHHHHHHHHhhcCCCCccceeEEE
Confidence            3689999999999998 3 333  689999986321    15667899999999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.08  E-value=8e-06  Score=69.53  Aligned_cols=66  Identities=33%  Similarity=0.526  Sum_probs=54.9

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +|...+.||.|+||.||++.+ .++..+++|.+.....   .......+..|+.+++.++||||+++++.
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   67 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM---SQKEREDAVNEIRILASVNHPNIISYKEA   67 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc---cHHHHHHHHHHHHHHHhCCCCCchhhhhh
Confidence            477889999999999999988 6788999999875322   23445678899999999999999998876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.08  E-value=7.2e-06  Score=73.23  Aligned_cols=62  Identities=26%  Similarity=0.303  Sum_probs=48.7

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      +.||+|+||.||++.+ .++..||+|.+.....  ........+..|+.++..+ +||||++++++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~   64 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVI--LQDDDVECTMTEKRILSLARNHPFLTQLYCC   64 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHH--hhccHHHHHHHHHHHHHhccCCCchhceeeE
Confidence            3689999999999998 7789999999975321  1223445677888888876 69999999887

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.08  E-value=1.1e-05  Score=69.73  Aligned_cols=61  Identities=25%  Similarity=0.272  Sum_probs=46.6

Q ss_pred             cccccCceeEEEEEe-cC--CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          197 PLGSGSFGSVYEGFT-DD--GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       197 ~lG~G~fG~Vy~~~~-~~--g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .||+|+||.||+|.. ..  ...+++|.+...    ........+.+|+.++..++||||+++++.|.
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~   65 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN----ASSKEQNEFLQQGDPYRILQHPNILQCLGQCV   65 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCC----CChHHHHHHHHHHHHHhccCCcchhheEEEec
Confidence            589999999999976 22  234667766542    12344578999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.07  E-value=1.9e-06  Score=80.44  Aligned_cols=72  Identities=25%  Similarity=0.311  Sum_probs=60.8

Q ss_pred             HHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          186 RRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       186 ~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .....+|.+++.||.|+|++|++|.. .++..+|||++.+.-.  ..+...+-+.+|-.+|..| .||.||+|+-.
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~I--ike~KvkYV~~Ek~~l~~L~~hPgivkLy~T  142 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYI--IKEKKVKYVTREKEALTQLSGHPGIVKLYFT  142 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHH--HhhcccchhhHHHHHHHHhhCCCCeEEEEEE
Confidence            44567999999999999999999999 8899999999986432  2345566788999999999 79999999876

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.07  E-value=1.4e-05  Score=68.13  Aligned_cols=61  Identities=31%  Similarity=0.459  Sum_probs=50.6

Q ss_pred             ccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++||.|+||.||++.+..+..||+|.+....    .......+..|+.++..++||||+++++++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   61 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTL----PPDLKRKFLQEAEILKQYDHPNIVKLIGVC   61 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCCeEEEEEEE
Confidence            3689999999999998338999999987522    223556789999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.06  E-value=1e-05  Score=72.39  Aligned_cols=67  Identities=24%  Similarity=0.429  Sum_probs=51.1

Q ss_pred             ecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcC---------hHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          194 KGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQG---------EQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       194 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~---------~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+.||.|+||.||+|.+ ..+..||+|.+.........         ......+.+|+.++..++||||+++++++
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   89 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVY   89 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEE
Confidence            457799999999999998 67899999998753221100         00122578999999999999999999873

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.06  E-value=1.5e-05  Score=68.46  Aligned_cols=61  Identities=26%  Similarity=0.254  Sum_probs=50.5

Q ss_pred             ccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       198 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ||.|+||.||++.. .++..+|+|.+.....  ........+.+|+.++..++||||+++++.+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   62 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHI--VETGQQEHIFSEKEILEECNHPFIVKLYRTF   62 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcc--hhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE
Confidence            69999999999999 6789999999975322  1233456799999999999999999998873

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.06  E-value=6.4e-06  Score=74.23  Aligned_cols=69  Identities=26%  Similarity=0.431  Sum_probs=56.7

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..++|.....||+|+||.||+|.+ .++..||+|.+....   ........+.+|+.+++.++||||++++++
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   82 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF---QSAIHAKRTYRELRLLKHMDHENVIGLLDV   82 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc---chhhHHHHHHHHHHHHHhccCCCHHHHHHH
Confidence            357899999999999999999999 678899999987422   123344667899999999999999988764

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.06  E-value=8.8e-07  Score=81.04  Aligned_cols=71  Identities=23%  Similarity=0.324  Sum_probs=57.0

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCC--CCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQ--GTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.|.++.+||+|+|+.||++.+ .....||||+-..+..  ........+...+|-.|.+.|+||.||++|+++
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf  536 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF  536 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence            3577889999999999999999 6678899998765432  111233467789999999999999999999973

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.06  E-value=1e-05  Score=72.42  Aligned_cols=62  Identities=16%  Similarity=0.199  Sum_probs=50.2

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      +.||+|+||.||++.. .++..||+|.+.....  ........+..|+.++..+ +||||+.++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~   64 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV--HDDEDIDWVQTEKHVFEQASSNPFLVGLHSC   64 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEE
Confidence            3699999999999998 7788999999986321  1234456788999999888 69999999886

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PTZ00284 protein kinase; Provisional

Probab=98.06  E-value=1.1e-05  Score=75.94  Aligned_cols=66  Identities=20%  Similarity=0.255  Sum_probs=49.9

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCC------Cceeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD------NIVQYFGT  259 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~Hp------NIV~l~g~  259 (264)
                      ...+|.+.+.||+|+||.||+|.+ .++..||||++..      .......+..|+.++..++|.      +|+.++++
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~  199 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRN------VPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY  199 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEec------chhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence            357899999999999999999998 7788999999974      122334556677777766554      47776655

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.05  E-value=9.8e-06  Score=71.35  Aligned_cols=62  Identities=26%  Similarity=0.422  Sum_probs=51.8

Q ss_pred             ecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          194 KGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       194 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ....||+|+||.||++.. .+|..||+|.+...     .......+.+|+.+++.++||||+++++.+
T Consensus        24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   86 (292)
T cd06657          24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR-----KQQRRELLFNEVVIMRDYQHENVVEMYNSY   86 (292)
T ss_pred             hHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc-----chhHHHHHHHHHHHHHhcCCcchhheeeEE
Confidence            346899999999999998 78899999998641     233456789999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.05  E-value=8.2e-06  Score=83.45  Aligned_cols=63  Identities=29%  Similarity=0.492  Sum_probs=50.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..+.....||+|+||.||+|.+ .+|..||||.+.....         ....|+.+|.+++|||||+++|+|.
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~l~~l~HpnIv~~~~~~~  753 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---------IPSSEIADMGKLQHPNIVKLIGLCR  753 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---------ccHHHHHHHhhCCCCCcceEEEEEE
Confidence            4566778899999999999998 7889999999874211         1134688999999999999999864

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.05  E-value=9.1e-06  Score=72.67  Aligned_cols=67  Identities=19%  Similarity=0.158  Sum_probs=51.6

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      +|...+.||+|+||.||++.+ .+|..||+|++.....  ........+..|..++..+. ||+|+.++++
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~   69 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV--IQDDDVECTMVEKRVLALQDKPPFLTQLHSC   69 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCchhheeeE
Confidence            467889999999999999998 7889999999985321  12233456788999998886 5677777765

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.05  E-value=8.2e-06  Score=69.70  Aligned_cols=59  Identities=24%  Similarity=0.479  Sum_probs=46.9

Q ss_pred             ccccccCceeEEEEEe-cCC----------CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDG----------FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g----------~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+ ..+          ..+++|.+...      ......+.+|+.+|+.++||||++++++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   70 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSD------HRDSLAFFETASLMSQLSHKHLVKLYGVC   70 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccc------hhhHHHHHHHHHHHHcCCCcchhheeeEE
Confidence            3689999999999998 444          24778877641      12257789999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.05  E-value=1.1e-05  Score=69.89  Aligned_cols=66  Identities=20%  Similarity=0.331  Sum_probs=51.2

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTEK  261 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~~  261 (264)
                      |...+.||+|+||.||+|.. .++..||+|.+.....   . .......+|+.++.++. ||||+++++++.
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~---~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   68 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK---S-LEQVNNLREIQALRRLSPHPNILRLIEVLF   68 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC---C-chhhhHHHHHHHHhhcCCCCCccceEEEEe
Confidence            45678899999999999998 7789999999875321   1 11234467899998885 999999998743

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.04  E-value=1.2e-05  Score=70.72  Aligned_cols=69  Identities=19%  Similarity=0.288  Sum_probs=54.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~~  261 (264)
                      .++|...+.||.|+||.||+|.+ .++..||||.+....    .......+..|+.++..+. ||||++++++|.
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~----~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~   84 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG----NKEENKRILMDLDVVLKSHDCPYIVKCYGYFI   84 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC----ChHHHHHHHHHHHHHHhccCCCchHhhheeee
Confidence            46788999999999999999999 568999999997532    2233456777887776665 999999999853

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.04  E-value=5.8e-06  Score=70.94  Aligned_cols=69  Identities=26%  Similarity=0.338  Sum_probs=50.7

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .|.+.+.||+|+||.||++.+ ..+..+++|.+...............+..|+.++..++||||+++++.
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   70 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHAS   70 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence            367889999999999999988 555556666665322211122334567789999999999999998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.04  E-value=1.2e-05  Score=69.47  Aligned_cols=59  Identities=22%  Similarity=0.338  Sum_probs=45.9

Q ss_pred             cccccCceeEEEEEe-c------------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          197 PLGSGSFGSVYEGFT-D------------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       197 ~lG~G~fG~Vy~~~~-~------------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .||+|+||.||+|.+ .            ....|++|.+...     .......+..|+.++..++|||||++++++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~   73 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-----HRDISLAFFETASMMRQVSHKHIVLLYGVC   73 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh-----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            589999999999985 1            1225888887641     233445788899999999999999999974

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.03  E-value=1.9e-06  Score=74.21  Aligned_cols=66  Identities=26%  Similarity=0.390  Sum_probs=54.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHH-hcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL-GQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL-~~l~HpNIV~l~g~  259 (264)
                      ++.+.+..||.|+||+|++-.+ ..|...|||.|+...    .....+++..|.+.. +.-+.||||++||+
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n----~~keq~rll~e~d~~mks~~cp~IVkfyGa  131 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN----IEKEQKRLLMEHDTVMKSSNCPNIVKFYGA  131 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc----chHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence            4667788999999999999988 889999999999632    356677888898755 55578999999998

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.03  E-value=1.7e-05  Score=68.85  Aligned_cols=67  Identities=34%  Similarity=0.540  Sum_probs=51.8

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC---CCCCceeeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF---EHDNIVQYFGTEK  261 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIV~l~g~~~  261 (264)
                      |...+.||.|+||.||+|.+ .++..+|+|.+.....   .......+.+|+.++..+   +||||+++++.+.
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~   71 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS---EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCH   71 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc---cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEe
Confidence            56788999999999999999 6689999999975322   222234566788877665   5999999998853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.03  E-value=1.5e-06  Score=88.11  Aligned_cols=68  Identities=35%  Similarity=0.775  Sum_probs=58.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +-+|..+.+||.|.||.||.|.. .+|...|+|.|.....   .......+..|..+|..|+|||+|++||+
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~---~~k~~~~i~eEm~vlE~lnHpNlV~YyGV 1302 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDS---DHKTFKLIAEEMKVLEGLNHPNLVRYYGV 1302 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCcc---ccccCcchHHHHHHHHhccCccccccCce
Confidence            44678899999999999999999 8999999999986432   24455678899999999999999999998

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.02  E-value=2e-05  Score=69.00  Aligned_cols=63  Identities=27%  Similarity=0.395  Sum_probs=52.4

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      |...+.||+|+||.||++.+ .++..+++|.+...     .......+.+|+.++..++||||++++++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~-----~~~~~~~~~~e~~~l~~~~h~~vv~~~~~   84 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR-----KQQRRELLFNEVVIMRDYQHPNIVEMYSS   84 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc-----chhHHHHHHHHHHHHHHcCCCChheEEEE
Confidence            44457899999999999998 67889999998742     23345668899999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.02  E-value=1.2e-05  Score=71.34  Aligned_cols=69  Identities=28%  Similarity=0.417  Sum_probs=54.2

Q ss_pred             cCCeeecccccccCceeEEEEEe--------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT--------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .++|...+.||+|+||.||++..        .....+|+|.+...    ........+..|+.++..+ +||||++++++
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN----ATDKDLADLISEMELMKLIGKHKNIINLLGV   86 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC----CChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence            35678999999999999999875        12346899988742    1334456788999999999 69999999987


Q ss_pred             ee
Q 024683          260 EK  261 (264)
Q Consensus       260 ~~  261 (264)
                      |.
T Consensus        87 ~~   88 (314)
T cd05099          87 CT   88 (314)
T ss_pred             Ec
Confidence            53

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.02  E-value=7.3e-06  Score=72.12  Aligned_cols=64  Identities=25%  Similarity=0.372  Sum_probs=52.8

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .|.....||.|+||.||++.. .++..||||.+...     .......+.+|+.++..++||||+++++.
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~   87 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR-----KQQRRELLFNEVVIMRDYHHENVVDMYNS   87 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc-----hHHHHHHHHHHHHHHHhCCCCcHHHHHHh
Confidence            344467799999999999998 67889999998741     33445678899999999999999998876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.02  E-value=1.1e-05  Score=71.20  Aligned_cols=68  Identities=26%  Similarity=0.420  Sum_probs=54.1

Q ss_pred             cCCeeecccccccCceeEEEEEe--------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT--------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .++|.....||+|+||.||.+.+        ..+..||+|.+...    ........+.+|+.++..+ +||||+++++.
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   89 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGA   89 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc----cchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence            45688999999999999999974        12347999988642    1334457789999999999 89999999987


Q ss_pred             e
Q 024683          260 E  260 (264)
Q Consensus       260 ~  260 (264)
                      +
T Consensus        90 ~   90 (304)
T cd05101          90 C   90 (304)
T ss_pred             E
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.01  E-value=4.5e-07  Score=86.32  Aligned_cols=66  Identities=35%  Similarity=0.561  Sum_probs=57.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      -++|.....+|.|.||.||++++ .++...|+|+++...     ......+++|+-+++.++|||||.|+|.
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep-----~dd~~~iqqei~~~~dc~h~nivay~gs   80 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP-----GDDFSGIQQEIGMLRDCRHPNIVAYFGS   80 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccC-----CccccccccceeeeecCCCcChHHHHhh
Confidence            46789999999999999999999 889999999999742     2334667899999999999999999987

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.01  E-value=1.1e-05  Score=71.93  Aligned_cols=62  Identities=27%  Similarity=0.273  Sum_probs=47.7

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      +.||+|+||.||+|.+ .+|..||+|.+......  .......+..|..++..+ +||||++++++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~   64 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL--IDDDVECTMVEKRVLALAWENPFLTHLYCT   64 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hcchHHHHHHHHHHHHhccCCCCccCeeEE
Confidence            3689999999999999 78899999999853210  122345567788888754 89999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.01  E-value=2e-05  Score=67.88  Aligned_cols=69  Identities=28%  Similarity=0.554  Sum_probs=53.0

Q ss_pred             CeeecccccccCceeEEEEEe-c-CCCeEEEEEeecCCCCC-----cChHHHHHHHHHHHHHhc-CCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-D-DGFFFAVKEVSLQDQGT-----QGEQSVLQLEQEISLLGQ-FEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~-~g~~vAvK~l~~~~~~~-----~~~~~~~~~~~Ei~iL~~-l~HpNIV~l~g~  259 (264)
                      +|...+.||+|+||.||++.+ . .+..+|+|.+.......     ........+..|+.++.+ ++||||+++++.
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~   77 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKT   77 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEee
Confidence            467788999999999999998 4 57889999987432211     123345667889988865 799999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.01  E-value=1.8e-05  Score=67.28  Aligned_cols=61  Identities=28%  Similarity=0.453  Sum_probs=50.6

Q ss_pred             ccccccCceeEEEEEe-cC---CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+ ..   +..|++|.+....    .......+.+|+.++..++||||+++++++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   65 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA----SEEERKDFLKEARVMKKLGHPNVVRLLGVC   65 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeecccc----chhHHHHHHHHHHHHhhcCCCChheeeeee
Confidence            4689999999999998 44   7889999998632    222467889999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.00  E-value=7.1e-06  Score=70.66  Aligned_cols=61  Identities=38%  Similarity=0.529  Sum_probs=48.0

Q ss_pred             ccccccCceeEEEEEe-cCC------CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDG------FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g------~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+ ...      ..+|+|.+...    ........+.+|+.+++.++||||++++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   68 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG----ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVC   68 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcc----cchhhHHHHHHHHHHHHhcCCCCeeeEeeee
Confidence            3689999999999987 222      57899988642    1223456788999999999999999999874

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=97.99  E-value=2.1e-05  Score=68.05  Aligned_cols=62  Identities=24%  Similarity=0.445  Sum_probs=48.3

Q ss_pred             ccccccCceeEEEEEe-cCCC--eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGF--FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTEK  261 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~--~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~~  261 (264)
                      +.||+|+||.||+|.+ .+|.  .+++|.+...    ........+.+|+.++.++ +||||+++++++.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   66 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----ASKDDHRDFAGELEVLCKLGHHPNIINLLGACE   66 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc----CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe
Confidence            3689999999999998 5554  4688887631    1334456788999999999 7999999998743

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=97.99  E-value=1.5e-05  Score=71.21  Aligned_cols=63  Identities=24%  Similarity=0.283  Sum_probs=46.1

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHH-HHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS-LLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~-iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||++.+ .++..||+|++.....  ........+..|.. ++..++||||+++++++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~   65 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAI--LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF   65 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH--HhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE
Confidence            3689999999999999 7788999999975221  01222334555554 56788999999998873

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=97.99  E-value=4e-06  Score=71.55  Aligned_cols=67  Identities=18%  Similarity=0.280  Sum_probs=58.5

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ...+|.+.+.||+|||+.||.+.. .++..+|+|.+..     ...+.....++|++..++++||||+++++.
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c-----~~~~~~e~~~rEid~~rkf~s~~vl~l~dh   86 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILC-----HSQEDIEEALREIDNHRKFNSPNVLRLVDH   86 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeec-----cchHHHHHHHHHHHHHHhhCCcchHHHHHH
Confidence            346799999999999999999998 7889999999985     245667889999999999999999998865

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=97.97  E-value=2.1e-05  Score=68.90  Aligned_cols=66  Identities=26%  Similarity=0.442  Sum_probs=53.4

Q ss_pred             CCeeecccccccCceeEEEEEe-c-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-D-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+|...+.||+|+||.||.|.+ .     ++..+++|.+..     ........+.+|+.++..++||||+++++.+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   76 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD-----PTLAARKDFQREAELLTNLQHEHIVKFYGVC   76 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC-----ccHHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence            4578889999999999999975 2     345688888864     2344456789999999999999999999884

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=97.97  E-value=3.3e-06  Score=77.71  Aligned_cols=63  Identities=30%  Similarity=0.456  Sum_probs=50.4

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHh--cCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLG--QFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~--~l~HpNIV~l~g~~~  261 (264)
                      ....+...||+|.||.||+|.+ .++.||||+++.        +..+.|..|-+|..  .+.|+||++++++.+
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~--------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ek  274 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE--------QEKQSFQNEKNIYSLPGMKHENILQFIGAEK  274 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc-cCceeEEEecCH--------HHHHHHHhHHHHHhccCccchhHHHhhchhc
Confidence            3456788999999999999998 568999999874        34466777777665  568999999998743

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=97.96  E-value=1.1e-05  Score=69.94  Aligned_cols=65  Identities=26%  Similarity=0.315  Sum_probs=51.5

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      |.+.+.||.|+||.||+|.. .++..|+||.+....    .........+|+..+..++ ||||+++++.+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   67 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKF----YSWEECMNLREVKSLRKLNEHPNIVKLKEVF   67 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhc----cchhHHHHHHHHHHHHhccCCCCchhHHHHh
Confidence            56778999999999999998 678899999987522    1122234567999999999 99999998873

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=97.96  E-value=2.1e-06  Score=75.53  Aligned_cols=70  Identities=20%  Similarity=0.442  Sum_probs=54.1

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cC----CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~----g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .....|+....||+|.||.||++.. .+    ...+|+|.+..+..   .........+|+.+++.++|||||.|..+
T Consensus        21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd---~tGiS~SAcREiaL~REl~h~nvi~Lv~V   95 (438)
T KOG0666|consen   21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD---GTGISMSACREIALLRELKHPNVISLVKV   95 (438)
T ss_pred             HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC---CCCcCHHHHHHHHHHHHhcCCcchhHHHH
Confidence            3356788899999999999999965 22    23789999986433   22334567899999999999999988654

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=97.95  E-value=5.3e-06  Score=71.33  Aligned_cols=61  Identities=20%  Similarity=0.378  Sum_probs=47.5

Q ss_pred             ccccccCceeEEEEEe-cCC-------CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDG-------FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g-------~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      +.||.|+||.||+|.+ ..+       ..+++|.+..     ........+..|+.++..++|||||++++++.
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~-----~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~   69 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDK-----SHRNYSESFFEAASMMSQLSHKHLVLNYGVCV   69 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcc-----hhHHHHHHHHHHHHHHHhCCCCChhheeeEEE
Confidence            3689999999999987 333       2478888764     12344567889999999999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.95  E-value=4.5e-06  Score=70.64  Aligned_cols=63  Identities=17%  Similarity=0.338  Sum_probs=55.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      .++|++.+.+|+|.|+.||.|.. .+...++||++++        -..+.+.+|+.||..|+ ||||++|++.
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP--------VkkkKIkREikIL~nL~gg~NIi~L~Di  101 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP--------VKKKKIKREIKILQNLRGGPNIIKLLDI  101 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech--------HHHHHHHHHHHHHHhccCCCCeeehhhh
Confidence            56899999999999999999998 6778899999974        23467999999999997 9999999986

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=97.95  E-value=1.1e-05  Score=69.86  Aligned_cols=65  Identities=32%  Similarity=0.530  Sum_probs=53.5

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      |.....||+|+||.||+|.. .++..+|+|.+....   ........+..|+.+++.++||||++++++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~   66 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN---EEEGIPSTALREISLLKELKHPNIVKLLDV   66 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEecccc---ccccccHHHHHHHHHHHhcCCCCHHHHHhh
Confidence            45678899999999999999 678999999998632   123334667889999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=97.94  E-value=1.4e-05  Score=69.08  Aligned_cols=66  Identities=29%  Similarity=0.451  Sum_probs=53.9

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |...+.||.|++|.||+|.. .+|..+++|.+.....   .......+..|+.+|+.++||||+++++.+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   67 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE---SEGIPKTALREIKLLKELNHPNIIKLLDVF   67 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc---cchhHHHHHHHHHHHHHhcCCCcchHHHhh
Confidence            45667899999999999998 6789999999875322   223456788999999999999999998863

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PRK10345 hypothetical protein; Provisional

Probab=97.93  E-value=2e-05  Score=66.63  Aligned_cols=59  Identities=22%  Similarity=0.474  Sum_probs=45.8

Q ss_pred             eecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-----CCCCceeeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-----EHDNIVQYFGT  259 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-----~HpNIV~l~g~  259 (264)
                      .....||+|+||.||.  + .++.. +||++....     ......+.+|+.++..+     +||||++++|+
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~-----~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~   69 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG-----DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGT   69 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCe-EEEEEeccc-----cchHHHHHHHHHHHHHhhccCCCCcccceeeEE
Confidence            4567899999999996  5 34444 799887532     22346789999999999     67999999987

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=97.92  E-value=1.6e-05  Score=67.79  Aligned_cols=60  Identities=22%  Similarity=0.363  Sum_probs=49.3

Q ss_pred             ccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       198 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ||.|+||.||++.+ .+|..+++|.+.....  ........+.+|+.++..++||||+++++.
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~   61 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM--IRKNQVDQVLTERDILSQAQSPYVVKLYYS   61 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhh--hhhhHHHHHHHHHHHHHhCCCcchhHHHHh
Confidence            68999999999999 6789999999875321  123456778999999999999999998765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.92  E-value=3.5e-06  Score=74.34  Aligned_cols=60  Identities=28%  Similarity=0.353  Sum_probs=52.5

Q ss_pred             cccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          195 GAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      ...||+|+|+.|-.|.. .+|..+|||+|.+.     ....+..+.+|++++..++ |+||++|+.+
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-----~gHsR~RvfREVe~f~~Cqgh~nilqLief  144 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-----PGHSRSRVFREVETFYQCQGHKNILQLIEF  144 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcC-----CchHHHHHHHHHHHHHHhcCCccHHHHHHH
Confidence            57899999999999998 89999999999873     3455678999999999885 9999999877

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=97.90  E-value=3.1e-05  Score=67.62  Aligned_cols=68  Identities=19%  Similarity=0.270  Sum_probs=52.7

Q ss_pred             CeeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      +|...+.||.|+||.||.+..    .+|..||+|.+...... ........+..|+.++..+ +||||+.+++.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~   73 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIV-QKAKTTEHTRTERQVLEHIRQSPFLVTLHYA   73 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhh-hcchHHHHHHHHHHHHHhcccCCChhceeeE
Confidence            467889999999999999986    36889999998752210 1123345678899999999 59999999876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.89  E-value=8.1e-06  Score=76.46  Aligned_cols=66  Identities=23%  Similarity=0.350  Sum_probs=56.3

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|.....||+|+-|.||.+.. .++..||||.+.+..     ......+..|+.+|+..+|+|||.+++.+
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~-----Q~~keLilnEi~Vm~~~~H~NiVnfl~Sy  339 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK-----QPKKELLLNEILVMRDLHHPNIVNFLDSY  339 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc-----CCchhhhHHHHHHHHhccchHHHHHHHHh
Confidence            4578889999999999999998 788899999999733     33345689999999999999999998764

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=97.86  E-value=3e-05  Score=69.34  Aligned_cols=60  Identities=27%  Similarity=0.325  Sum_probs=45.2

Q ss_pred             ccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC---CCCCceeeeee
Q 024683          198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF---EHDNIVQYFGT  259 (264)
Q Consensus       198 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIV~l~g~  259 (264)
                      ||+|+||.||+|.+ .+|..||+|.+.....  ........+..|..++..+   +||||+.+++.
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~   64 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEI--VAKKEVAHTIGERNILVRTLLDESPFIVGLKFS   64 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHH--hhhhHHHHHHHHHHHHHHhccCCCCcCcceEEE
Confidence            79999999999998 7789999999975221  1222344556677777655   69999998876

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=97.82  E-value=3.3e-05  Score=67.43  Aligned_cols=68  Identities=19%  Similarity=0.259  Sum_probs=52.3

Q ss_pred             CeeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      +|...+.||+|+||.||++..    .++..||||.+..... .........+..|+.++..+ +||||+.+++.
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~   73 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI-VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYA   73 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH-HhhhhHHHHHHHHHHHHHhccCCcchhhhhee
Confidence            367889999999999999876    3567899999874221 01223345688999999999 59999998865

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.82  E-value=6.1e-05  Score=62.49  Aligned_cols=66  Identities=32%  Similarity=0.551  Sum_probs=54.4

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      |.....||.|+||.||++.. .++..+++|.+.....    ......+.+|+..+..++|+|++++++.+.
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~   67 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKT----EKQREEFLREIRILKKLKHPNIVKLYGVFE   67 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccc----hHHHHHHHHHHHHHHhCCCCChhhheeeee
Confidence            45678899999999999999 5688999999986321    125678899999999999999999988743

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=97.78  E-value=4.2e-05  Score=64.90  Aligned_cols=60  Identities=28%  Similarity=0.361  Sum_probs=49.3

Q ss_pred             ccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       198 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ||.|+||.||.+.+ ..+..+|+|.+.....  ........+..|+.++..++||||+++++.
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   61 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI--IKRKEVEHTLTERNILSRINHPFIVKLHYA   61 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhh--cchHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence            69999999999998 6788999999876322  123345678999999999999999998765

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=97.70  E-value=5.3e-05  Score=73.95  Aligned_cols=69  Identities=26%  Similarity=0.372  Sum_probs=54.9

Q ss_pred             cCCeeecccccccCceeEEEEEe----cC----CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT----DD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~----~~----g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      ..++.+.+.||+|.||.|++|..    ..    ...||||.+...    ........+..|+.+|+.+ .|||||.++|+
T Consensus       295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~----~~~~~~~~~~~El~~m~~~g~H~niv~llG~  370 (609)
T KOG0200|consen  295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKEN----ASSSEKKDLMSELNVLKELGKHPNIVNLLGA  370 (609)
T ss_pred             hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccc----cCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence            34456667999999999999975    11    357999999852    2346678899999999998 59999999998


Q ss_pred             ee
Q 024683          260 EK  261 (264)
Q Consensus       260 ~~  261 (264)
                      |.
T Consensus       371 ~t  372 (609)
T KOG0200|consen  371 CT  372 (609)
T ss_pred             ec
Confidence            75

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=97.69  E-value=1.4e-05  Score=75.27  Aligned_cols=58  Identities=31%  Similarity=0.366  Sum_probs=48.4

Q ss_pred             CeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+..+.-||.|+-|.||.|.+ .+..||||+++.            .-..+|..|++|+||||+.+.|+|.
T Consensus       125 ~IsELeWlGSGaQGAVF~Grl-~netVAVKKV~e------------lkETdIKHLRkLkH~NII~FkGVCt  182 (904)
T KOG4721|consen  125 EISELEWLGSGAQGAVFLGRL-HNETVAVKKVRE------------LKETDIKHLRKLKHPNIITFKGVCT  182 (904)
T ss_pred             HhhhhhhhccCcccceeeeec-cCceehhHHHhh------------hhhhhHHHHHhccCcceeeEeeeec
Confidence            345677899999999999998 567899998873            1246788899999999999999975

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.66  E-value=0.00017  Score=63.38  Aligned_cols=71  Identities=23%  Similarity=0.333  Sum_probs=46.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cC---CCeEEEEEeecCCCCCcChHH------HHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DD---GFFFAVKEVSLQDQGTQGEQS------VLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~~~~~~~~------~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..|.+.+.||+|+||.||+|.+ .+   +..+|+|..............      ......+...+..+.|+||+.++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            5799999999999999999998 44   456777765432211000100      0112234445667789999999986


Q ss_pred             e
Q 024683          260 E  260 (264)
Q Consensus       260 ~  260 (264)
                      +
T Consensus        92 ~   92 (294)
T PHA02882         92 G   92 (294)
T ss_pred             e
Confidence            4

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=97.62  E-value=0.00018  Score=61.55  Aligned_cols=63  Identities=25%  Similarity=0.407  Sum_probs=45.4

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHH-hcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL-GQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL-~~l~HpNIV~l~g~~  260 (264)
                      +.||.|+||.||+|.. ..|..||+|.+.....  ........+..|..++ ...+||||+++++++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~   66 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDM--IAKNQVTNVKAERAIMMIQGESPYVAKLYYSF   66 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhh--hHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE
Confidence            5689999999999998 6788999999875321  1122233445565544 455899999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=97.57  E-value=0.00013  Score=64.49  Aligned_cols=62  Identities=23%  Similarity=0.266  Sum_probs=46.3

Q ss_pred             ecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          194 KGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       194 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +++.+|.|+++.||++.. ++..||+|.+....   ........+..|+.+++.++||||++++++
T Consensus         6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~---~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~   67 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDS---CSKEDLKLLQQEIITSRQLQHPNILPYVTS   67 (314)
T ss_pred             hhHhhcCCceEEEEEecC-CCCEEEEEEEeccc---cchhHHHHHHHHHHHHHhcCCcchhhhhhe
Confidence            445555555555555554 78999999998632   134456789999999999999999999886

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.55  E-value=7.7e-07  Score=76.17  Aligned_cols=70  Identities=26%  Similarity=0.478  Sum_probs=55.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ...|....+||+|.||.||+++. .+|..||+|.+-.+..   .........+|+.+|..+.|+|++.++..|+
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene---KeGfpitalreikiL~~lkHenv~nliEic~   86 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE---KEGFPITALREIKILQLLKHENVVNLIEICR   86 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc---ccCCcHHHHHHHHHHHHhcchhHHHHHHHHh
Confidence            45677788999999999999998 7888899887654221   2233456789999999999999999988765

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=97.52  E-value=0.00038  Score=60.67  Aligned_cols=62  Identities=23%  Similarity=0.189  Sum_probs=42.8

Q ss_pred             cccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHH---HhcCCCCCceeeeeee
Q 024683          197 PLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL---LGQFEHDNIVQYFGTE  260 (264)
Q Consensus       197 ~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~i---L~~l~HpNIV~l~g~~  260 (264)
                      .||+|+||.||++.. .+|..+|+|.+......  .......+..|..+   +...+||||+.+++.+
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   66 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK--MKQGETLALNERIMLSLVSTGDCPFIVCMTYAF   66 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccc--cchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEE
Confidence            489999999999998 77899999999753321  11122233444433   3445799999988763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=97.52  E-value=0.00023  Score=70.07  Aligned_cols=66  Identities=24%  Similarity=0.485  Sum_probs=55.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ++.|.+...||.|.+|.||++.. .+|+..|+|++...      .....++..|.++|+.+ +|||++.++|+.
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~------~d~deEiE~eynil~~~~~hpnv~~fyg~~   85 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT------EDEEEEIELEYNMLKKYSHHPNVATFYGAF   85 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC------ccccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            56788999999999999999998 88999999999862      23335677888888766 699999999984

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=97.48  E-value=0.00049  Score=59.91  Aligned_cols=61  Identities=26%  Similarity=0.238  Sum_probs=42.2

Q ss_pred             cccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHH---HHHhcCCCCCceeeeee
Q 024683          197 PLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEI---SLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       197 ~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei---~iL~~l~HpNIV~l~g~  259 (264)
                      .||+|+||.||++.+ .+|..||+|.+......  .......+..|.   .++....||||+.+++.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~   65 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK--MKQGETLALNERIMLSLVSTGDCPFIVCMSYA   65 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccc--cchhHHHHHHHHHHHHHHHhCCCCcEeeeeee
Confidence            489999999999998 77899999998753321  111112233333   44555689999998876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.46  E-value=0.0003  Score=65.40  Aligned_cols=65  Identities=23%  Similarity=0.300  Sum_probs=55.0

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-----CC---Cceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-----HD---NIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-----Hp---NIV~l~g~~  260 (264)
                      ..|...++||-|.|++||+|.+ .+.+.||+|+.+.      ........+.||.+|.+++     |+   .||+|++.+
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS------AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F  151 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS------AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF  151 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh------hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence            5789999999999999999999 7888999999984      5566677899999999874     32   689998863

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.45  E-value=0.00053  Score=55.44  Aligned_cols=60  Identities=33%  Similarity=0.553  Sum_probs=49.6

Q ss_pred             ccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          198 LGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       198 lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ||+|++|.||++.. .++..+++|.+.....    ......+.+|+.++..+.|++|+++++++.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~----~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~   61 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS----SSLLEELLREIEILKKLNHPNIVKLYGVFE   61 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccc----hhHHHHHHHHHHHHHhcCCCCeeeEeeeee
Confidence            68999999999999 5588999999985321    113567899999999999999999998754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.45  E-value=0.00026  Score=61.58  Aligned_cols=68  Identities=24%  Similarity=0.306  Sum_probs=56.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      +++.+....||.|++|.|+++.+ .+|...|||.+...    ......+.++..+.++...+ .|.||+.+|++
T Consensus        91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt----~Nkee~kRILmDldvv~~s~dcpyIV~c~GyF  160 (391)
T KOG0983|consen   91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT----GNKEENKRILMDLDVVLKSHDCPYIVQCFGYF  160 (391)
T ss_pred             hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc----CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEE
Confidence            45567788899999999999999 78899999999863    35566788999998887665 89999999984

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.40  E-value=0.0002  Score=68.31  Aligned_cols=66  Identities=23%  Similarity=0.336  Sum_probs=42.8

Q ss_pred             hcCCeeecccccccCceeEEEEEe-----------------cCCCeEEEEEeecCCCCCcC---------hHHHHHHHHH
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-----------------DDGFFFAVKEVSLQDQGTQG---------EQSVLQLEQE  241 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-----------------~~g~~vAvK~l~~~~~~~~~---------~~~~~~~~~E  241 (264)
                      ..++|.+.++||+|+||.||+|.+                 ..+..||||.+.........         .........|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999964                 23457999998752210000         0011223456


Q ss_pred             HHHHhcCCCCCc
Q 024683          242 ISLLGQFEHDNI  253 (264)
Q Consensus       242 i~iL~~l~HpNI  253 (264)
                      +..+..++|.|+
T Consensus       223 ~~~l~~l~~~~l  234 (507)
T PLN03224        223 AYMCAKIKRNPI  234 (507)
T ss_pred             HHHHHHhhcccc
Confidence            677777776654

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.39  E-value=0.00039  Score=57.52  Aligned_cols=60  Identities=20%  Similarity=0.186  Sum_probs=43.4

Q ss_pred             cccccccCceeEEEEEecCCCeEEEEEeecCCCCCcC-------------------h-H-HHHHHHHHHHHHhcCCCCCc
Q 024683          195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQG-------------------E-Q-SVLQLEQEISLLGQFEHDNI  253 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~-------------------~-~-~~~~~~~Ei~iL~~l~HpNI  253 (264)
                      ...||+|+||.||+|.+.+|..||||.++........                   . . ....+..|...+.++.|++|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4679999999999998867899999999864211000                   0 0 02234688999999999887


Q ss_pred             e
Q 024683          254 V  254 (264)
Q Consensus       254 V  254 (264)
                      .
T Consensus        82 ~   82 (190)
T cd05145          82 P   82 (190)
T ss_pred             C
Confidence            4

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.31  E-value=0.00015  Score=68.19  Aligned_cols=68  Identities=26%  Similarity=0.447  Sum_probs=57.0

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      ...|+..+.||+||-+.||+....+.+.+|+|.+....   .+.+....|..|+.+|.+|. |.+||+|+++
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~---~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DY  428 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE---ADNQTLDGYRNEIALLNKLKGHDKIIQLYDY  428 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh---cCHHHHHHHHHHHHHHHHhcCCceEEEEeee
Confidence            34688999999999999999988555678888776422   36777899999999999995 9999999998

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.30  E-value=0.00023  Score=59.07  Aligned_cols=59  Identities=19%  Similarity=0.122  Sum_probs=41.1

Q ss_pred             cccccccCceeEEEEEecCCCeEEEEEeecCCCCCcCh--------H-------------HHHHHHHHHHHHhcCCCCCc
Q 024683          195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGE--------Q-------------SVLQLEQEISLLGQFEHDNI  253 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~--------~-------------~~~~~~~Ei~iL~~l~HpNI  253 (264)
                      ...||+|+||.||+|.+.+|..||||+++.........        .             .......|+.+|..+.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            35799999999999998778999999998642211000        0             01233469999998876655

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.22  E-value=0.00023  Score=69.80  Aligned_cols=60  Identities=30%  Similarity=0.454  Sum_probs=48.7

Q ss_pred             CeeecccccccCcee-EEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGS-VYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      -|...+++|.|+-|+ ||+|.+ .|+.||||.+-.        ....-..+||.+|...+ |||||++|+.
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~--------e~~~~A~rEi~lL~eSD~H~NviRyyc~  571 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE--------EFFDFAQREIQLLQESDEHPNVIRYYCS  571 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEee-CCceehHHHHhh--------HhHHHHHHHHHHHHhccCCCceEEEEee
Confidence            356678888888885 799998 678999998853        23345789999999884 9999999998

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.19  E-value=0.00055  Score=56.82  Aligned_cols=69  Identities=20%  Similarity=0.186  Sum_probs=47.1

Q ss_pred             CeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcCh-----------------HHHHHHHHHHHHHhcCCCCC-
Q 024683          191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGE-----------------QSVLQLEQEISLLGQFEHDN-  252 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~-----------------~~~~~~~~Ei~iL~~l~HpN-  252 (264)
                      .|...+.||.|+||.||++...+|..||||.++.........                 .....+..|..++..+.|++ 
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            366788999999999999988778999999987532110000                 01123678888998887773 


Q ss_pred             -ceeeeee
Q 024683          253 -IVQYFGT  259 (264)
Q Consensus       253 -IV~l~g~  259 (264)
                       ++..++.
T Consensus        96 ~v~~~~~~  103 (198)
T cd05144          96 PVPKPIDW  103 (198)
T ss_pred             CCCceeec
Confidence             4444443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.00  E-value=0.00025  Score=61.61  Aligned_cols=67  Identities=28%  Similarity=0.417  Sum_probs=54.6

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+.+..+.||=|+||.||...+ .+|..||.|.+..-.   ..-...+.+.+|+.+|..++|.|++..++.
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf---q~L~s~krvFre~kmLcfFkHdNVLSaLDI  120 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF---QNLASCKRVFREIKMLSSFRHDNVLSLLDI  120 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHH---HHHHHHHHHHHHHHHHHhhccccHHHHHHh
Confidence            4567789999999999999999 889999999886311   123345778999999999999999987765

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.00  E-value=0.0017  Score=55.60  Aligned_cols=68  Identities=10%  Similarity=-0.084  Sum_probs=52.4

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHH------HHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQ------LEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~------~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..+|...+++|.|+||.||.... ++..+|+|.+.....  ..+.....      +.+|+..+.++.||+|..+.+.
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~--~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~  103 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVK--RTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF  103 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcC--chHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence            46899999999999999998655 566899999975332  12233233      6799999999999999887665

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=96.96  E-value=0.001  Score=57.93  Aligned_cols=73  Identities=23%  Similarity=0.224  Sum_probs=57.4

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc---ChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~---~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .....|...+.||+|..+.|.+|.+ .+|..+|+|+|........   .......-.+|+.||+++ .||+|+.+.++
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~   91 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV   91 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence            3456788899999999999999998 8899999999986432211   223345567899999988 59999999887

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=96.94  E-value=0.00094  Score=56.01  Aligned_cols=67  Identities=19%  Similarity=0.302  Sum_probs=54.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhc-CCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ-FEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIV~l~g~  259 (264)
                      .++......||+|+||.|-+-++ .+|...|+|.+...    ...+..+..++|+.+..+ ...|.+|.+||+
T Consensus        45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~t----vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa  113 (282)
T KOG0984|consen   45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRAT----VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGA  113 (282)
T ss_pred             hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhh----cChHHHHHHHHhhhhhccCCCCCeEEEeehh
Confidence            34456677899999999988888 88999999999852    345667788999987654 479999999997

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=96.91  E-value=0.0031  Score=54.57  Aligned_cols=62  Identities=15%  Similarity=0.110  Sum_probs=42.9

Q ss_pred             cCCeeecccc--cccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhc-CCCCCceeeeeee
Q 024683          189 IMSWQKGAPL--GSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ-FEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~l--G~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.+  |.|+||.||++.. .++..+|+|.+.....   .     .  .|+.+... .+||||+++++.+
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~---~-----~--~e~~~~~~~~~h~~iv~~~~~~   78 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF---N-----A--IEPMVHQLMKDNPNFIKLYYSV   78 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhc---c-----h--hhHHHHHHhhcCCCEEEEEEEE
Confidence            3455555555  9999999999998 7788999999875221   0     0  12222222 2799999999874

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=96.88  E-value=0.0019  Score=53.75  Aligned_cols=56  Identities=29%  Similarity=0.462  Sum_probs=45.5

Q ss_pred             CceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          202 SFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       202 ~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      +||.||+|.+ .+|..+++|.+.....    ......+.+|+..+..++|+||+++++.+.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~   57 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKI----KKKRERILREISILKKLKHPNIVRLYDVFE   57 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEeccccc----ccHHHHHHHHHHHHHhCCCCcHHHHHhhee
Confidence            5899999999 6689999999985321    111578999999999999999999988753

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=96.86  E-value=0.00013  Score=73.56  Aligned_cols=73  Identities=16%  Similarity=0.131  Sum_probs=58.6

Q ss_pred             HHHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          185 YRRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       185 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +....++|.+.++||+|+||.|....+ .++..+|+|.+++..+  .......-|..|-.||..-+.+.||+|+-+
T Consensus        70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eM--lKr~~tA~F~EERDimv~~ns~Wiv~LhyA  143 (1317)
T KOG0612|consen   70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEM--LKRAETACFREERDIMVFGNSEWIVQLHYA  143 (1317)
T ss_pred             HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHH--hhchhHHHHHHHhHHHHcCCcHHHHHHHHH
Confidence            344467899999999999999999999 8899999999987433  122334568889999998899999988644

>smart00090 RIO RIO-like kinase

Probab=96.85  E-value=0.0019  Score=55.50  Aligned_cols=61  Identities=20%  Similarity=0.100  Sum_probs=44.2

Q ss_pred             CeeecccccccCceeEEEEE-e-cCCCeEEEEEeecCCCCCcC-----------------h--HHHHHHHHHHHHHhcCC
Q 024683          191 SWQKGAPLGSGSFGSVYEGF-T-DDGFFFAVKEVSLQDQGTQG-----------------E--QSVLQLEQEISLLGQFE  249 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~-~-~~g~~vAvK~l~~~~~~~~~-----------------~--~~~~~~~~Ei~iL~~l~  249 (264)
                      .|.+...||+|+||.||+|. + .+|..||+|.+.........                 .  .....+..|+.++..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47788999999999999998 4 68999999999853211000                 0  01234678999999987


Q ss_pred             CC
Q 024683          250 HD  251 (264)
Q Consensus       250 Hp  251 (264)
                      +.
T Consensus       109 ~~  110 (237)
T smart00090      109 EA  110 (237)
T ss_pred             hc
Confidence            53

>PRK14879 serine/threonine protein kinase; Provisional

Probab=96.75  E-value=0.0036  Score=52.08  Aligned_cols=61  Identities=10%  Similarity=0.008  Sum_probs=43.2

Q ss_pred             ccccccCceeEEEEEecCCCeEEEEEeecCCCCCc---ChHHHHHHHHHHHHHhcCCCCCceeee
Q 024683          196 APLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIVQYF  257 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~---~~~~~~~~~~Ei~iL~~l~HpNIV~l~  257 (264)
                      +.||+|++|.||+|.+ .|..+++|..........   .......+.+|+.++..+.|++|+...
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~   65 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPA   65 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCe
Confidence            5789999999999988 667899998654221100   011234578999999999988876543

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=96.66  E-value=0.0005  Score=63.48  Aligned_cols=68  Identities=19%  Similarity=0.208  Sum_probs=54.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFG  258 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g  258 (264)
                      .+.|..-++||+|+||.||-|.- .+|..+|.|.+.+...  ...+.....+.|-.||.+++.|.||.|--
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRi--Kkr~ge~maLnEk~iL~kV~s~FiVslaY  252 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRI--KKRKGETMALNEKQILEKVSSPFIVSLAY  252 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHH--HHhhhhHHhhHHHHHHHHhccCcEEEEee
Confidence            35688889999999999999988 8999999999876332  12333456788999999999999998743

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=96.57  E-value=0.0056  Score=50.44  Aligned_cols=57  Identities=16%  Similarity=0.121  Sum_probs=40.3

Q ss_pred             cccccCceeEEEEEecCCCeEEEEEeecCCCCCc---ChHHHHHHHHHHHHHhcCCCCCce
Q 024683          197 PLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV  254 (264)
Q Consensus       197 ~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~---~~~~~~~~~~Ei~iL~~l~HpNIV  254 (264)
                      .||+|+||.||+|.+ .|..+++|..........   .......+.+|+.++..+.|+++.
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   60 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVN   60 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            489999999999997 667899998653221100   111235678999999999887643

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.50  E-value=0.0034  Score=51.17  Aligned_cols=31  Identities=35%  Similarity=0.504  Sum_probs=27.0

Q ss_pred             cccccccCceeEEEEEecCCCeEEEEEeecC
Q 024683          195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQ  225 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~  225 (264)
                      .+.||+|+||.||+|.+.+|..||||++...
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTG   32 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecC
Confidence            4679999999999998866889999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=96.49  E-value=0.00095  Score=60.83  Aligned_cols=64  Identities=25%  Similarity=0.411  Sum_probs=53.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-c---CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~---~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      ...|...++||+|.|++||++.+ .   ....||+|.+..       ......+..|+++|..+. +.||+++.++
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~-------ts~p~ri~~El~~L~~~gG~~ni~~~~~~  103 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYR-------TSSPSRILNELEMLYRLGGSDNIIKLNGC  103 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccc-------ccCchHHHHHHHHHHHhccchhhhcchhh
Confidence            45688899999999999999998 4   567899999974       233457899999999985 8999998877

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=96.45  E-value=0.0015  Score=59.01  Aligned_cols=55  Identities=22%  Similarity=0.254  Sum_probs=46.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE  249 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~  249 (264)
                      ...|.+...+|+|.||.|-.|.+ .++..||||+++.      -........-|+++|.++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~------V~kYreAa~iEi~vLqki~  143 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN------VDKYREAALIEIEVLQKIN  143 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHH------HHHHhhHHHHHHHHHHHHH
Confidence            56899999999999999999998 6789999999984      3455566788999999984

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.38  E-value=0.0012  Score=59.07  Aligned_cols=69  Identities=14%  Similarity=0.170  Sum_probs=57.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      ..+|.++.+||+|+|++|..+.+ .+.+.+|+|+++++...  .......++.|-.+.... +||.+|.|+.+
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n--ddedidwvqtek~vfe~asn~pflvglhsc  319 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN--DDEDIDWVQTEKHVFEQASNNPFLVGLHSC  319 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcC--CcccchhHHhhHHHHHhccCCCeEEehhhh
Confidence            56899999999999999999998 88899999999876542  445567778888777655 79999998876

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.32  E-value=0.002  Score=62.01  Aligned_cols=67  Identities=21%  Similarity=0.326  Sum_probs=57.2

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      -|..++.||-|+||.|.++.- ++...+|+|.|++.+.  ........+..|-.||..-+++.||+||-.
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDV--l~rnQvaHVKAERDILAEADn~WVVrLyyS  697 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADV--LMRNQVAHVKAERDILAEADNEWVVRLYYS  697 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHH--HhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence            588999999999999999887 7788999999987432  345667788999999999999999999865

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.26  E-value=0.0046  Score=53.09  Aligned_cols=55  Identities=27%  Similarity=0.296  Sum_probs=42.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCC
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH  250 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~H  250 (264)
                      ...|...++||+|+||.+|.|.. ..|..||||.=....       ...++..|..+...|+|
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-------~hpqL~yEskvY~iL~~   69 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-------KHPQLLYESKVYRILQG   69 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-------CCcchhHHHHHHHHhcc
Confidence            56899999999999999999999 889999999865321       11345677777776654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.15  E-value=0.012  Score=49.74  Aligned_cols=67  Identities=15%  Similarity=0.078  Sum_probs=45.6

Q ss_pred             eecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTEK  261 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~~  261 (264)
                      .....|++|+||+||.... .+..++.+.+..... ....-....+.+|+.+|.+|. |++|+.++++..
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~-~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~   72 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPW-WLRGVAWWLARREALALRQLDGLPRTPRLLHWDG   72 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchh-hhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcC
Confidence            3467899999999996654 667777776664211 001112235789999999995 578888887643

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=95.98  E-value=0.019  Score=55.32  Aligned_cols=67  Identities=13%  Similarity=0.030  Sum_probs=43.9

Q ss_pred             CeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCC---cChHHHHHHHHHHHHHhcCCCCCceeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGT---QGEQSVLQLEQEISLLGQFEHDNIVQYFG  258 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g  258 (264)
                      .|...+.||+|+||.||+|.+. +..+++|.........   ........+.+|+.++..++|++|+....
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~  403 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYL-GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVI  403 (535)
T ss_pred             ccCccceeccCCcEEEEEEeec-CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEE
Confidence            3456789999999999999883 3344444432211100   01122356889999999999999876543

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=95.90  E-value=0.0097  Score=57.71  Aligned_cols=37  Identities=24%  Similarity=0.426  Sum_probs=32.8

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cC----CCeEEEEEeec
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DD----GFFFAVKEVSL  224 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~----g~~vAvK~l~~  224 (264)
                      ..++|...+.||+|+||.||+|.+ .+    +..||+|.+..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~  171 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE  171 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence            367899999999999999999998 66    78999998764

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=95.73  E-value=0.0012  Score=61.94  Aligned_cols=69  Identities=22%  Similarity=0.241  Sum_probs=55.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      ..+++....||-|+||.|-+... .....+|+|++++...  ........+..|-.||..++.|.||+||-.
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hI--VdtkQqeHv~sEr~Im~~~~s~fIvrLYrT  488 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHI--VDTKQQEHVFSERNIMMECRSDFIVRLYRT  488 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhc--cchhHHHHHHhHHHHHHhcCchHHHHHHHH
Confidence            45677888999999999998877 3333589999987443  345566789999999999999999999865

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.52  E-value=0.021  Score=51.15  Aligned_cols=64  Identities=22%  Similarity=0.317  Sum_probs=44.8

Q ss_pred             CeeecccccccCceeEEEEEe-cC-CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCC----CCceeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH----DNIVQYFGT  259 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~-g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~H----pNIV~l~g~  259 (264)
                      .|.+.+.||+|+||.||.+.. .. ...+|+|.......     .....+..|+.++..+.+    +++..+++.
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~-----~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~   88 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELG-----SKPSVLKIEIQVLKKLEKKNGPSHFPKLLDH   88 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEeccc-----CCCccchhHHHHHHHHhhhcCCCCCCEEEEe
Confidence            799999999999999999998 33 35788998775321     111256778888887762    355555443

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.44  E-value=0.0022  Score=58.82  Aligned_cols=69  Identities=20%  Similarity=0.149  Sum_probs=49.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      ..+|..+.+||+|+||.|.++.. .+...+|||++++.-.  .......--+.|-.+|.-. +-|.+|+|+.+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDVi--iQdDDvectm~EKrvLAL~~kppFL~qlHSc  418 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVI--IQDDDVECTMVEKRVLALPGKPPFLVQLHSC  418 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhcccee--eecCcccceehhhhheecCCCCchHHHHHHH
Confidence            46789999999999999999988 5667899999987432  1222233345566666655 46788887765

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=95.40  E-value=0.0091  Score=54.55  Aligned_cols=68  Identities=26%  Similarity=0.304  Sum_probs=52.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC-----CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD-----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~-----g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++.....+-+|.||.||.|.| ..     .+.|-+|.+..    ...+-+...+..|.-.+..+.|||+....|+|
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~----~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ----HASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh----cccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            35678888999999999999987 22     23455666553    23455667889999999999999999988874

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=95.32  E-value=0.027  Score=53.31  Aligned_cols=54  Identities=19%  Similarity=0.201  Sum_probs=44.8

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE  249 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~  249 (264)
                      ..|.+....|+|-|++|..|.+ ..|..||||+|..      .+...+.=+.|++||.+|+
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn------NE~M~KtGl~EleiLkKL~  486 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN------NEVMHKTGLKELEILKKLN  486 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeec------chHHhhhhhHHHHHHHHhh
Confidence            4678888899999999999999 7788999999985      3444556678999999885

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=95.25  E-value=0.034  Score=42.50  Aligned_cols=57  Identities=16%  Similarity=0.096  Sum_probs=43.9

Q ss_pred             cccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCC--CCceeeeee
Q 024683          195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQYFGT  259 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~H--pNIV~l~g~  259 (264)
                      .+.||.|.++.||++.. .+..+++|......      . ...+..|+.++..+.|  ++++++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~-~~~~~~iK~~~~~~------~-~~~~~~e~~~~~~l~~~~~~~p~~~~~   61 (155)
T cd05120           3 IKLLKGGLTNRVYLLGT-KDEDYVLKINPSRE------K-GADREREVAILQLLARKGLPVPKVLAS   61 (155)
T ss_pred             ceecccccccceEEEEe-cCCeEEEEecCCCC------c-hhHHHHHHHHHHHHHHcCCCCCeEEEE
Confidence            46799999999999998 33689999886421      1 4568899999999976  477777665

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=95.12  E-value=0.092  Score=44.68  Aligned_cols=65  Identities=28%  Similarity=0.413  Sum_probs=51.6

Q ss_pred             eeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCC-Cceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD-NIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~Hp-NIV~l~g~~  260 (264)
                      |.....||.|+||.||.+.+.  ..+++|.+......  .......+.+|+.++..+.|+ +|+.+++..
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~   67 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLES--KSKEVERFLREIQILASLNHPPNIVKLYDFF   67 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhcc--chhHHHHHHHHHHHHHHccCCcceeeEEEEE
Confidence            567788999999999999874  67899999863321  112467899999999999988 799988764

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.05  E-value=0.034  Score=49.98  Aligned_cols=60  Identities=23%  Similarity=0.306  Sum_probs=41.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCcee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQ  255 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~  255 (264)
                      .-+|.++++||+|+||..+.|.. -++.+||||.=...   +..+    ++..|....+.|. .++|..
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk---S~AP----QLrdEYr~YKlL~g~~GIP~   88 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK---SEAP----QLRDEYRTYKLLGGTEGIPQ   88 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEecccc---CCcc----hHHHHHHHHHHHcCCCCCCc
Confidence            34789999999999999999998 78899999975421   1122    3445555444443 455544

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=95.02  E-value=0.011  Score=51.55  Aligned_cols=65  Identities=15%  Similarity=0.213  Sum_probs=52.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .+.|.+.+.+|+|-||.+.++.+ .+.+.+++|.++.      ......+|.+|...--.| .|.||+.-|++
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~------p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~v   89 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR------PQTTQADFVREFHYSFFLSPHQHIIDTYEV   89 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc------chhhHHHHHHHhccceeeccchhhhHHHHH
Confidence            45688899999999999999999 7788999999985      344567899998765556 48999876653

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=94.72  E-value=0.0088  Score=52.87  Aligned_cols=62  Identities=21%  Similarity=0.158  Sum_probs=49.8

Q ss_pred             hcCCeee-cccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          188 RIMSWQK-GAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       188 ~~~~~~~-~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .+++|.+ ..+||-|--|.|..|.+ .+|..+|+|++..      .    ....+||++.-.. .|||||.++++
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D------s----~KARrEVeLHw~~s~h~~iV~IidV  123 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD------S----PKARREVELHWMASGHPHIVSIIDV  123 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc------C----HHHHhHhhhhhhhcCCCceEEeehh
Confidence            3566665 47899999999999999 8899999999873      2    3457888876555 59999999886

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=94.01  E-value=0.088  Score=50.71  Aligned_cols=35  Identities=26%  Similarity=0.222  Sum_probs=30.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeec
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSL  224 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~  224 (264)
                      ...|+. ..||+|++|.||+|.+ .+|..||||++++
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP  154 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRP  154 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCc
Confidence            455665 7899999999999999 4599999999985

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=94.00  E-value=0.029  Score=53.86  Aligned_cols=63  Identities=27%  Similarity=0.203  Sum_probs=50.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ++.|.....+|.|+|+.|..|.+ .++...++|.+....         .....|+.++... +||||+++++.+
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---------~~~~~e~~~~~~~~~h~niv~~~~v~  385 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---------DDNQDEIPISLLVRDHPNIVKSHDVY  385 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc---------cccccccchhhhhcCCCcceeeccee
Confidence            56788888899999999999999 788899999998631         2235677666555 699999999874

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=93.87  E-value=0.072  Score=50.03  Aligned_cols=30  Identities=30%  Similarity=0.243  Sum_probs=27.1

Q ss_pred             cccccccCceeEEEEEecCCCeEEEEEeec
Q 024683          195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSL  224 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~  224 (264)
                      .+.||.|++|.||+|...+|..||||+.+.
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp  151 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRP  151 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCC
Confidence            368999999999999987899999999875

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=93.74  E-value=0.035  Score=42.49  Aligned_cols=34  Identities=29%  Similarity=0.233  Sum_probs=28.8

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeec
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSL  224 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~  224 (264)
                      ..|. ...||.|+.|.||+|.+.+|..||||+.+.
T Consensus        12 ~~fd-~~PlasASiaQVh~a~l~~g~~VaVKV~rP   45 (119)
T PF03109_consen   12 DEFD-PEPLASASIAQVHRARLKDGEEVAVKVQRP   45 (119)
T ss_pred             HHCC-cchhhheehhhheeeeecccchhhhhhcch
Confidence            3444 478999999999999997799999999875

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=93.72  E-value=0.014  Score=54.83  Aligned_cols=73  Identities=33%  Similarity=0.525  Sum_probs=58.1

Q ss_pred             HHHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          185 YRRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       185 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ......+|..+..+|.|+||+|+.+.. .++..+|||.|....    .........+|+.-+.++.|++++.++-.++
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn----~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~  117 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKN----REESRSRVLREVSSLAEFEHPGIKRYFHAWY  117 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccchhhHHHHhcccc----hhhhhhhhhccccchhhhcccchhhheecee
Confidence            344467899999999999999999888 455579999998632    3445567889999999999999999876543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=93.24  E-value=0.069  Score=54.46  Aligned_cols=46  Identities=24%  Similarity=0.359  Sum_probs=36.8

Q ss_pred             cCchHHHHHhcCCeeecccccccCceeEEEEEecCCCeEEEEEeec
Q 024683          179 FSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSL  224 (264)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~  224 (264)
                      +.+..........|.+.+.||+|+||+||+|....|..||+|+-..
T Consensus       687 l~~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P  732 (974)
T KOG1166|consen  687 LNPNTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKP  732 (974)
T ss_pred             cCccceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecC
Confidence            3344444455678999999999999999999995599999998765

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=93.21  E-value=0.2  Score=41.35  Aligned_cols=53  Identities=23%  Similarity=0.233  Sum_probs=41.6

Q ss_pred             eecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCc
Q 024683          193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI  253 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI  253 (264)
                      .....||+|.+|.||+|.| .|..+|+|+-+.       +.....+..|..+|..+.-.++
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~-------ds~r~~l~kEakiLeil~g~~~   77 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW-RGGEVALKVRRR-------DSPRRNLEKEAKILEILAGEGV   77 (201)
T ss_pred             hhhhhhhcccccEEEEeec-cCceEEEEEecC-------CcchhhHHHHHHHHHHhhhcCC
Confidence            4567899999999999999 566899998764       2334678899999988765544

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=91.67  E-value=0.15  Score=45.54  Aligned_cols=68  Identities=24%  Similarity=0.272  Sum_probs=53.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|.....+|.|.= .|-.+.+ -.+..||+|.+....   ......+...+|..+|..+.|+||++++.++
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf---~n~~~akra~rel~l~~~v~~~nii~l~n~f   84 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF---QNQTHAKRAYRELKLMKCVNHKNIISLLNVF   84 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc---ccCccchhhhhhhhhhhhhcccceeeeeecc
Confidence            456778888998876 5666666 678899999987642   2344557788999999999999999998874

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=90.93  E-value=0.027  Score=49.26  Aligned_cols=67  Identities=19%  Similarity=0.266  Sum_probs=51.1

Q ss_pred             CeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ...+..+|.+..-|..|+|.| .|..+++|++.....   .......|..|.--|+-+.||||+..+|+|.
T Consensus       191 ~lnl~tkl~e~hsgelwrgrw-qgndivakil~vr~~---t~risrdfneefp~lrifshpnilpvlgacn  257 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRW-QGNDIVAKILNVREV---TARISRDFNEEFPALRIFSHPNILPVLGACN  257 (448)
T ss_pred             hhhhhhhhccCCCcccccccc-cCcchhhhhhhhhhc---chhhcchhhhhCcceeeecCCchhhhhhhcc
Confidence            345567788888899999999 445567788876432   4445567888888899899999999999863

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=87.38  E-value=1.4  Score=37.71  Aligned_cols=64  Identities=13%  Similarity=0.084  Sum_probs=41.4

Q ss_pred             ccccc-ccCceeEEEEEecCCCeEEEEEeecCCC-----C---CcChHHHHHHHHHHHHHhcCCCCCc--eeeeee
Q 024683          195 GAPLG-SGSFGSVYEGFTDDGFFFAVKEVSLQDQ-----G---TQGEQSVLQLEQEISLLGQFEHDNI--VQYFGT  259 (264)
Q Consensus       195 ~~~lG-~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-----~---~~~~~~~~~~~~Ei~iL~~l~HpNI--V~l~g~  259 (264)
                      ...|| .|+.|+||.... .+..++||.......     .   .........+.+|+.++..|.|++|  +..+++
T Consensus        36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~  110 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAA  110 (239)
T ss_pred             CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEee
Confidence            34566 777888888776 467899988753211     0   0011233567899999999998875  444443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=87.08  E-value=1.7  Score=38.48  Aligned_cols=55  Identities=27%  Similarity=0.349  Sum_probs=42.2

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhc
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ  247 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~  247 (264)
                      .+..+..||.|+|+.||.+.+ .+|..+|+|+......  ......+.+.+|.-....
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~--~~~~~~~~~~~e~l~~~~   68 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPAD--ASANEYEQLKEEQLAITL   68 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESST--THTTHHHHHHHHHHGGGG
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccc--cchHHHHHHHHHHHHhhh
Confidence            457789999999999999999 8899999999876542  234456677777654444

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=85.69  E-value=3.7  Score=34.59  Aligned_cols=73  Identities=21%  Similarity=0.226  Sum_probs=49.5

Q ss_pred             cCCeeecccccccCc-eeEEEEEecCCCeEEEEEeecCC---CCC-----c--Ch------HHHHHHHHHHHHHhcCC--
Q 024683          189 IMSWQKGAPLGSGSF-GSVYEGFTDDGFFFAVKEVSLQD---QGT-----Q--GE------QSVLQLEQEISLLGQFE--  249 (264)
Q Consensus       189 ~~~~~~~~~lG~G~f-G~Vy~~~~~~g~~vAvK~l~~~~---~~~-----~--~~------~~~~~~~~Ei~iL~~l~--  249 (264)
                      ..+++..+.||.|.- |.||+... .|..+|+|......   ...     .  ..      ....-|..|.+...+|+  
T Consensus        36 ~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   36 GDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            378999999999999 99999998 67899999933211   000     0  00      12335777887777664  


Q ss_pred             -CCCc--eeeeeeeee
Q 024683          250 -HDNI--VQYFGTEKV  262 (264)
Q Consensus       250 -HpNI--V~l~g~~~v  262 (264)
                       +.++  |+++|+-.+
T Consensus       115 ~~e~~~Avkc~Gyl~L  130 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLL  130 (207)
T ss_pred             cccCceEEEeeEEEEE
Confidence             4455  888887543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=84.03  E-value=2  Score=35.36  Aligned_cols=60  Identities=12%  Similarity=0.084  Sum_probs=41.6

Q ss_pred             ccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCC--CCceeeeee
Q 024683          196 APLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQYFGT  259 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~H--pNIV~l~g~  259 (264)
                      ..||.|.++.||++....|..+++|.......    ......+..|+.++..+.+  .++.+++.+
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~----~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~   65 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL----LPSAHDVAREYRVLRALAGTGVPVPKVLAL   65 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCccc----CcccccHHHHHHHHHHhhCCCCCCCCEEEE
Confidence            56899999999999874457899998764221    1123467899999998865  334444444

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=83.52  E-value=1.1  Score=43.12  Aligned_cols=29  Identities=28%  Similarity=0.248  Sum_probs=26.9

Q ss_pred             ccccccCceeEEEEEecCCCeEEEEEeec
Q 024683          196 APLGSGSFGSVYEGFTDDGFFFAVKEVSL  224 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~  224 (264)
                      ..|+.++.|.||+|.+.+|..||||+.++
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrP  159 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRP  159 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCC
Confidence            67999999999999997799999999986

>cd05151 ChoK Choline Kinase (ChoK)

Probab=82.52  E-value=1.2  Score=35.18  Aligned_cols=52  Identities=15%  Similarity=0.072  Sum_probs=36.5

Q ss_pred             cccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCc
Q 024683          195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI  253 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI  253 (264)
                      .+.|+.|.++.||++.. .+..+++|......      .....+..|+.++..+.+.++
T Consensus         3 ~~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~------~~~~~~~~E~~~l~~l~~~~~   54 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV-ANKKYVVRIPGNGT------ELLINRENEAENSKLAAEAGI   54 (170)
T ss_pred             eeecCCcccCceEEEEE-CCeEEEEEeCCCCc------ccccCHHHHHHHHHHHHHhCC
Confidence            35688999999999887 46789999876421      112245788888888765443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	264
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		7e-04

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 198 LGSGSFGSVYEGFTDD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG+G++ +VY+G     G + A+KEV L  +      ++    +EISL+ + +H+NIV+ 
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI----REISLMKELKHENIVRL 68
Query: 257 F 257
           +
Sbjct: 69  Y 69

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	264
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-24
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-19
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-18
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-16
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-15
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	7e-14
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	9e-13
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	9e-13
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-12
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-10
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	8e-10
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-09
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-09
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	9e-09
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-08
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	7e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	8e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-07
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-07
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-07
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-07
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-07
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-07
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	6e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-07
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-07
3soc_A	322	Activin receptor type-2A; structural genomics cons	8e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	9e-07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-06
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-06
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-06
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-06
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-06
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-06
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-06
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-06
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-06
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-06
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	7e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	7e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	9e-06
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-05
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-05
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-05
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-05
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-05
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-05
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	8e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	9e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	9e-05
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-04
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-04
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-04
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-04
2l1w_B	26	Vacuolar calcium ATPase BCA1 peptide; calmodulin,	4e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-04
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	6e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	7e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	8e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	8e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	9e-04

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 98.5 bits (246), Expect = 1e-24
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%)

Query: 180 SLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQL 238
           S   +Y            LG G++G VY G    +    A+KE+  +D      +    L
Sbjct: 12  SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-----RYSQPL 66

Query: 239 EQEISLLGQFEHDNIVQYFGTEK 261
            +EI+L    +H NIVQY G+  
Sbjct: 67  HEEIALHKHLKHKNIVQYLGSFS 89

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 84.0 bits (208), Expect = 5e-19
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 14/128 (10%)

Query: 136 VSSSEYTMTEAAEAGRFQDLFDDVASISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKG 195
              +    + A            +   ++D+  + L  +L     ++ +YR  +      
Sbjct: 7   SGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKL---KPVDYEYREEVHWMTHQ 63

Query: 196 APLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
             +G GSFG V+       GF  AVK+V L+              +E+          IV
Sbjct: 64  PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIV 113

Query: 255 QYFGTEKV 262
             +G  + 
Sbjct: 114 PLYGAVRE 121

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 79.7 bits (197), Expect = 9e-18
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
            +    +G GSF +VY+G  T+     A  E+  +      +    + ++E  +L   +H
Sbjct: 28  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT---KSERQRFKEEAEMLKGLQH 84

Query: 251 DNIVQYFG 258
            NIV+++ 
Sbjct: 85  PNIVRFYD 92

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 75.1 bits (185), Expect = 5e-16
 Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 10/90 (11%)

Query: 180 SLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQL 238
            +  +Y      + +   +GSG FGSV++     DG  +A+K       G+  EQ+ L+ 
Sbjct: 4   GMKSRYTTE---FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR- 59

Query: 239 EQEISLLGQFEHDNIVQYFGTE----KVCI 264
            +  +     +H ++V+YF        + I
Sbjct: 60  -EVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 72.2 bits (177), Expect = 9e-15
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 178 NFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
           + S NE    +   +     +GSG    V++   +    +A+K V+L++      Q++  
Sbjct: 44  SSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---ADNQTLDS 100

Query: 238 LEQEISLLGQFEH--DNIVQYFGTEK 261
              EI+ L + +   D I++ +  E 
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEI 126

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 68.9 bits (169), Expect = 7e-14
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++    +G G F  VY      DG   A+K+V + D      ++     +EI LL Q  H
Sbjct: 34  FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA--DCIKEIDLLKQLNH 91

Query: 251 DNIVQYFGT----EKVCI 264
            N+++Y+ +     ++ I
Sbjct: 92  PNVIKYYASFIEDNELNI 109

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 66.3 bits (162), Expect = 9e-13
 Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 5/72 (6%)

Query: 192 WQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH- 250
           +     +GSG    V++   +    +A+K V+L++      Q++     EI+ L + +  
Sbjct: 11  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---ADNQTLDSYRNEIAYLNKLQQH 67

Query: 251 -DNIVQYFGTEK 261
            D I++ +  E 
Sbjct: 68  SDKIIRLYDYEI 79

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 65.8 bits (161), Expect = 9e-13
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 191 SWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
           S+Q+ + LG GS+G V++    +DG  +AVK      +G +     L   +  S     +
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLA--EVGSHEKVGQ 115

Query: 250 HDNIVQYFGT----EKVCI 264
           H   V+          + +
Sbjct: 116 HPCCVRLEQAWEEGGILYL 134

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 65.4 bits (160), Expect = 1e-12
 Identities = 15/84 (17%), Positives = 35/84 (41%), Gaps = 5/84 (5%)

Query: 180 SLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLE 239
              +    +   +     +GSG    V++   +    +A+K V+L++      Q++    
Sbjct: 18  LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---ADNQTLDSYR 74

Query: 240 QEISLLGQFEH--DNIVQYFGTEK 261
            EI+ L + +   D I++ +  E 
Sbjct: 75  NEIAYLNKLQQHSDKIIRLYDYEI 98

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 58.2 bits (141), Expect = 4e-10
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +     +G GSFG+VY      +    A+K++S   + +  +   +   +E+  L +  H
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII--KEVRFLQKLRH 113

Query: 251 DNIVQYFGT 259
            N +QY G 
Sbjct: 114 PNTIQYRGC 122

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 13/82 (15%)

Query: 178 NFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVL 236
             ++++++      +++   +GSG FG V++     DG  + +K V   ++         
Sbjct: 2   AHTVDKRFGMD---FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE--------- 49

Query: 237 QLEQEISLLGQFEHDNIVQYFG 258
           + E+E+  L + +H NIV Y G
Sbjct: 50  KAEREVKALAKLDHVNIVHYNG 71

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 57.5 bits (139), Expect = 8e-10
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF- 248
           +S+     LG G+ G++      D    AVK +  +             ++E+ LL +  
Sbjct: 24  ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--------FSFADREVQLLRESD 75

Query: 249 EHDNIVQYFGTEK 261
           EH N+++YF TEK
Sbjct: 76  EHPNVIRYFCTEK 88

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           +G GSFG       T+DG  + +KE+++        +   +  +E+++L   +H NIVQY
Sbjct: 32  IGEGSFGKAILVKSTEDGRQYVIKEINISRMS---SKEREESRREVAVLANMKHPNIVQY 88

Query: 257 FGT----EKVCI 264
             +      + I
Sbjct: 89  RESFEENGSLYI 100

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 16/83 (19%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGF-----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ 240
            R +   +  + LG G+FGSV          + G   AVK   LQ  G   ++   +   
Sbjct: 22  ERHL---KYISQLGKGNFGSVELCRYDPLGDNTGALVAVK--QLQHSGPDQQRDFQR--- 73

Query: 241 EISLLGQFEHDNIVQYFGTEKVC 263
           EI +L     D IV+Y G   V 
Sbjct: 74  EIQILKALHSDFIVKYRG---VS 93

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           W+    LG G+FG VY+    + G   A K +  +      E+ +     EI +L   +H
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-----EEELEDYIVEIEILATCDH 75

Query: 251 DNIVQYFGT 259
             IV+  G 
Sbjct: 76  PYIVKLLGA 84

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 193 QKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
           +    LG G FG V+E     D   +A+K + L ++    E+    + +E+  L + EH 
Sbjct: 8   EPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREK----VMREVKALAKLEHP 63

Query: 252 NIVQYFG 258
            IV+YF 
Sbjct: 64  GIVRYFN 70

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           + K   +G GSFG V++G         A+K + L     + E  +  ++QEI++L Q + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL----EEAEDEIEDIQQEITVLSQCDS 79

Query: 251 DNIVQYFGT 259
             + +Y+G+
Sbjct: 80  PYVTKYYGS 88

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 187 RRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
           R    +++ A LG G+FG V +     D  ++A+K++         E+ +  +  E+ LL
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT------EEKLSTILSEVMLL 56

Query: 246 GQFEHDNIVQYFGT 259
               H  +V+Y+  
Sbjct: 57  ASLNHQYVVRYYAA 70

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQS--VLQLEQEISLLGQFEHD 251
              +G G FG V++G    D    A+K + L D   + E      + ++E+ ++    H 
Sbjct: 24  EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83

Query: 252 NIVQYFG--TEKVCI 264
           NIV+ +G       +
Sbjct: 84  NIVKLYGLMHNPPRM 98

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 54.3 bits (131), Expect = 9e-09
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 15/83 (18%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGFTDD-----GFFFAVKEVSLQDQGTQGEQSVLQLEQ 240
           +R +   +K   LG G FG V     D      G   AVK  +L+     G Q     +Q
Sbjct: 30  KRYL---KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVK--ALKA--DAGPQHRSGWKQ 82

Query: 241 EISLLGQFEHDNIVQYFGTEKVC 263
           EI +L    H++I++Y G    C
Sbjct: 83  EIDILRTLYHEHIIKYKG---CC 102

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 53.7 bits (130), Expect = 1e-08
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 180 SLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVS---LQDQGTQGEQSV 235
           SL      +I  ++ G  LG GSF  VY       G   A+K +    +   G       
Sbjct: 1   SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQ---- 56

Query: 236 LQLEQEISLLGQFEHDNIVQYFG 258
            +++ E+ +  Q +H +I++ + 
Sbjct: 57  -RVQNEVKIHCQLKHPSILELYN 78

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           +G+GS+G   +     DG     KE+         +Q    L  E++LL + +H NIV+Y
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQ---MLVSEVNLLRELKHPNIVRY 70

Query: 257 F 257
           +
Sbjct: 71  Y 71

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 15/83 (18%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGF-----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ 240
           +R +   ++   LG G FG V          + G   AVK  SL+     G   +  L++
Sbjct: 20  KRFL---KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVK--SLKP--ESGGNHIADLKK 72

Query: 241 EISLLGQFEHDNIVQYFGTEKVC 263
           EI +L    H+NIV+Y G   +C
Sbjct: 73  EIEILRNLYHENIVKYKG---IC 92

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 8/69 (11%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +     LG GS+GSVY+    + G   A+K+V ++         + ++ +EIS++ Q + 
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-------LQEIIKEISIMQQCDS 83

Query: 251 DNIVQYFGT 259
            ++V+Y+G+
Sbjct: 84  PHVVKYYGS 92

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 8/70 (11%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-E 249
           ++    +G+G++G VY+G     G   A+K + +            +++QEI++L ++  
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT------GDEEEEIKQEINMLKKYSH 79

Query: 250 HDNIVQYFGT 259
           H NI  Y+G 
Sbjct: 80  HRNIATYYGA 89

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 197 PLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
            LG G F  V       DG F+A+K +   +     +Q   + ++E  +   F H NI++
Sbjct: 36  KLGEGGFSYVDLVEGLHDGHFYALKRILCHE-----QQDREEAQREADMHRLFNHPNILR 90

Query: 256 YFG 258
              
Sbjct: 91  LVA 93

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 6/68 (8%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
                 +G GS G V        G   AVK + L+ Q  +       L  E+ ++  ++H
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL-----LFNEVVIMRDYQH 101

Query: 251 DNIVQYFG 258
            N+V+ + 
Sbjct: 102 FNVVEMYK 109

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           + +   +G G+ G+VY       G   A+++++LQ Q          +  EI ++ + ++
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-----PKKELIINEILVMRENKN 76

Query: 251 DNIVQYFG 258
            NIV Y  
Sbjct: 77  PNIVNYLD 84

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 51.6 bits (124), Expect = 7e-08
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 16/83 (19%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGF-----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ 240
            R +   +    LG G+FGSV          + G   AVK   LQ   T+      +  +
Sbjct: 40  ERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQH-STEEHLRDFE--R 91

Query: 241 EISLLGQFEHDNIVQYFGTEKVC 263
           EI +L   +HDNIV+Y G   VC
Sbjct: 92  EIEILKSLQHDNIVKYKG---VC 111

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.2 bits (123), Expect = 8e-08
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++    +GSG+   V   +        A+K ++L     + + S+ +L +EI  + Q  H
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL----EKCQTSMDELLKEIQAMSQCHH 72

Query: 251 DNIVQYFGT 259
            NIV Y+ +
Sbjct: 73  PNIVSYYTS 81

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 16/83 (19%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGF-----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ 240
            R +   +    LG G+FGSV          + G   AVK   LQ   T+      +  +
Sbjct: 9   ERHL---KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQH-STEEHLRDFE--R 60

Query: 241 EISLLGQFEHDNIVQYFGTEKVC 263
           EI +L   +HDNIV+Y G   VC
Sbjct: 61  EIEILKSLQHDNIVKYKG---VC 80

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 169 ISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQ 227
           +S+        S  + +       +    +G G++GSV +      G   AVK +     
Sbjct: 1   MSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRS--- 57

Query: 228 GTQGEQSVLQLEQEIS-LLGQFEHDNIVQYFG 258
            T  E+   QL  ++  ++   +   IVQ++G
Sbjct: 58  -TVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
           +G G FG VY+G   DG   A+K      + +QG +   + E EI  L    H ++V
Sbjct: 47  IGHGVFGKVYKGVLRDGAKVALK--RRTPESSQGIE---EFETEIETLSFCRHPHLV 98

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 9/77 (11%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEV---SLQDQGTQGEQSVLQLEQE 241
            R    + +G  LG G F   +E    D    FA K V    L     +      ++  E
Sbjct: 11  PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-----KMSME 65

Query: 242 ISLLGQFEHDNIVQYFG 258
           IS+     H ++V + G
Sbjct: 66  ISIHRSLAHQHVVGFHG 82

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 199 GSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           G     +V        G +  V+ ++L+    +       L+ E+ +   F H NIV Y 
Sbjct: 36  GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVT---FLQGELHVSKLFNHPNIVPYR 92

Query: 258 GT 259
            T
Sbjct: 93  AT 94

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 7/69 (10%)

Query: 193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
                +G G FG V+ G    G   AVK  S ++     E+S  + E EI       H+N
Sbjct: 45  VLQESIGKGRFGEVWRG-KWRGEEVAVKIFSSRE-----ERSWFR-EAEIYQTVMLRHEN 97

Query: 253 IVQYFGTEK 261
           I+ +   + 
Sbjct: 98  ILGFIAADN 106

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 9/77 (11%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVS---LQDQGTQGEQSVLQLEQE 241
            R    + +G  LG G F   +E    D    FA K V    L     +      ++  E
Sbjct: 37  PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE-----KMSME 91

Query: 242 ISLLGQFEHDNIVQYFG 258
           IS+     H ++V + G
Sbjct: 92  ISIHRSLAHQHVVGFHG 108

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 17/101 (16%)

Query: 175 LVYNFSLNEKYRRRIMSW-------QKGAPLGSGSFGSVYEG--FTDDGFFF--AVKEVS 223
           ++ +  ++++ + ++            G  LG G FGSV E     +DG F   AVK + 
Sbjct: 1   MLDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK 60

Query: 224 LQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKVCI 264
                      + +  +E + + +F+H ++ +  G   V +
Sbjct: 61  ---ADIIASSDIEEFLREAACMKEFDHPHVAKLVG---VSL 95

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 12/107 (11%)

Query: 165 DDAEISLLMELVYNFSLNEKYRRRIMSWQK--------GAPLGSGSFGSVYEGF-TDDGF 215
           +++EI+L +     F   +        + K           LGSG+ G V   F      
Sbjct: 102 NNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCK 161

Query: 216 FFAVKEVS---LQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT 259
             A++ +S         +     L +E EI +L +  H  I++    
Sbjct: 162 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 208

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           +G G FG VY  F   G   AVK  +  D      Q++  + QE  L    +H NI+   
Sbjct: 15  IGIGGFGKVYRAFWI-GDEVAVK-AARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72

Query: 258 GTEKVCI 264
           G   VC+
Sbjct: 73  G---VCL 76

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 10/72 (13%)

Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG G FG   +    + G    +KE+   D     E++     +E+ ++   EH N++++
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFD-----EETQRTFLKEVKVMRCLEHPNVLKF 72

Query: 257 FG----TEKVCI 264
            G     +++  
Sbjct: 73  IGVLYKDKRLNF 84

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 48.7 bits (116), Expect = 6e-07
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG+G+ G V++      G   A K + L            Q+ +E+ +L +     IV +
Sbjct: 41  LGAGNGGVVFKVSHKPSGLVMARKLIHL----EIKPAIRNQIIRELQVLHECNSPYIVGF 96

Query: 257 FG 258
           +G
Sbjct: 97  YG 98

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 48.2 bits (115), Expect = 8e-07
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
           Q       G FG V++       + AVK   +QD     +QS    E E+  L   +H+N
Sbjct: 27  QLLEVKARGRFGCVWKA-QLLNEYVAVKIFPIQD-----KQSWQN-EYEVYSLPGMKHEN 79

Query: 253 IVQYFGTEK 261
           I+Q+ G EK
Sbjct: 80  ILQFIGAEK 88

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 48.1 bits (115), Expect = 9e-07
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
                +G G +G V+ G +  G   AVK  S +D     E+S  + E E+       H+N
Sbjct: 11  TLLECVGKGRYGEVWRG-SWQGENVAVKIFSSRD-----EKSWFR-ETELYNTVMLRHEN 63

Query: 253 IVQYFGTEK 261
           I+ +  ++ 
Sbjct: 64  ILGFIASDM 72

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ 240
           ++K +  +  ++ G PLG G FG+VY        F  A+K   L     +      QL +
Sbjct: 1   SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--VLFKAQLEKAGVEHQLRR 58

Query: 241 EISLLGQFEHDNIVQYFGT 259
           E+ +     H NI++ +G 
Sbjct: 59  EVEIQSHLRHPNILRLYGY 77

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS-LLGQFEHDNIVQ 255
           LG G++G V +      G   AVK +      T   Q   +L  ++   +   +    V 
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIRA----TVNSQEQKRLLMDLDISMRTVDCPFTVT 70

Query: 256 YFG 258
           ++G
Sbjct: 71  FYG 73

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 11/102 (10%), Positives = 31/102 (30%), Gaps = 16/102 (15%)

Query: 175 LVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVS----------- 223
           L+Y     ++  + I  ++    L  G F  +      D  F+A+K+             
Sbjct: 16  LIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILC-EKDNKFYALKKYEKSLLEKKRDFT 74

Query: 224 -LQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ---YFGTEK 261
              +     +      + E+ ++   +++  +          
Sbjct: 75  KSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYD 116

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              LGSG FG V  G     +  AVK +    +G+  E    Q   E   + +  H  +V
Sbjct: 13  LKELGSGQFGVVKLGKWKGQYDVAVKMIK---EGSMSEDEFFQ---EAQTMMKLSHPKLV 66

Query: 255 QYFGTEKVC 263
           +++G   VC
Sbjct: 67  KFYG---VC 72

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           +G G +G+VY+G + D    AVK  S  +      Q+ +  E+ I  +   EHDNI ++ 
Sbjct: 21  IGRGRYGAVYKG-SLDERPVAVKVFSFAN-----RQNFIN-EKNIYRVPLMEHDNIARFI 73

Query: 258 G 258
            
Sbjct: 74  V 74

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              +G+GSFG+V+      G   AVK +  QD   +      +  +E++++ +  H NIV
Sbjct: 42  KEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVN---EFLREVAIMKRLRHPNIV 97

Query: 255 QYFG 258
            + G
Sbjct: 98  LFMG 101

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 9/70 (12%)

Query: 198 LGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
           LG GSFG V  G     +      AVK   L+       +++    +E++ +   +H N+
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVK--CLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83

Query: 254 VQYFGTEKVC 263
           ++ +G   V 
Sbjct: 84  IRLYG---VV 90

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 9/65 (13%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQY 256
           LG GS G+V    +  G   AVK + +                EI LL +  +H N+++Y
Sbjct: 23  LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI--------ALMEIKLLTESDDHPNVIRY 74

Query: 257 FGTEK 261
           + +E 
Sbjct: 75  YCSET 79

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              L     G +++G    G    VK + ++D  T+  +      +E   L  F H N++
Sbjct: 15  LTKLNENHSGELWKG-RWQGNDIVVKVLKVRDWSTRKSR---DFNEECPRLRIFSHPNVL 70

Query: 255 QYFG 258
              G
Sbjct: 71  PVLG 74

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 10/69 (14%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           +G G+FG V +         A+K++  + +             E+  L +  H NIV+ +
Sbjct: 16  VGRGAFGVVCKA-KWRAKDVAIKQIESESE-------RKAFIVELRQLSRVNHPNIVKLY 67

Query: 258 G--TEKVCI 264
           G     VC+
Sbjct: 68  GACLNPVCL 76

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
              LG GSFG VYEG              A+K  ++ +  +  E+   +   E S++ +F
Sbjct: 30  SRELGQGSFGMVYEGVAKGVVKDEPETRVAIK--TVNEAASMRERI--EFLNEASVMKEF 85

Query: 249 EHDNIVQYFGTEKVC 263
              ++V+  G   V 
Sbjct: 86  NCHHVVRLLG---VV 97

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
           Q    +G G +G V+ G    G   AVK     +     E S  + E EI       H+N
Sbjct: 40  QMVKQIGKGRYGEVWMG-KWRGEKVAVKVFFTTE-----EASWFR-ETEIYQTVLMRHEN 92

Query: 253 IVQYFGTEK 261
           I+ +   + 
Sbjct: 93  ILGFIAADI 101

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 9/66 (13%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           LG+G FG V  G     +  A+K +    +G+  E   ++   E  ++    H+ +VQ +
Sbjct: 32  LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIE---EAKVMMNLSHEKLVQLY 85

Query: 258 GTEKVC 263
           G   VC
Sbjct: 86  G---VC 88

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
              LG G+FG VYEG              AVK  +L +  +  EQ  L    E  ++ +F
Sbjct: 35  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK--TLPEVCS--EQDELDFLMEALIISKF 90

Query: 249 EHDNIVQYFGTEKVC 263
            H NIV+  G   V 
Sbjct: 91  NHQNIVRCIG---VS 102

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
              LG   FG VY+G              A+K  +L+D+     +   +   E  L  + 
Sbjct: 14  MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIK--TLKDKAEGPLRE--EFRHEAMLRARL 69

Query: 249 EHDNIVQYFGTEKVC 263
           +H N+V   G   V 
Sbjct: 70  QHPNVVCLLG---VV 81

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 188 RIMS-WQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
           R ++ ++    +G G FG V+E     D   +A+K + L ++    E    ++ +E+  L
Sbjct: 3   RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE----KVMREVKAL 58

Query: 246 GQFEHDNIVQYFGT 259
            + EH  IV+YF  
Sbjct: 59  AKLEHPGIVRYFNA 72

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 195 GAPLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
              LG G+FG VYEG              AVK  +L +  +  EQ  L    E  ++ +F
Sbjct: 76  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK--TLPEVCS--EQDELDFLMEALIISKF 131

Query: 249 EHDNIVQYFGTEKVC 263
            H NIV+  G   V 
Sbjct: 132 NHQNIVRCIG---VS 143

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 47.0 bits (111), Expect = 2e-06
 Identities = 9/85 (10%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 179 FSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
            +++    +     +   PL  G    V+     +    FA+K  ++  + ++ E  + +
Sbjct: 51  TTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSE--LER 108

Query: 238 LEQEISLLGQFEHDNIVQYFGTEKV 262
           L +      +   ++  +     ++
Sbjct: 109 LHEATFAAARLLGESPEEARDRRRL 133

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ-FEHDNIVQ 255
           L  G F  VYE      G  +A+K +   +     E+    + QE+  + +   H NIVQ
Sbjct: 36  LAEGGFAFVYEAQDVGSGREYALKRLLSNE-----EEKNRAIIQEVCFMKKLSGHPNIVQ 90

Query: 256 YFG 258
           +  
Sbjct: 91  FCS 93

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 14/73 (19%)

Query: 197 PLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
            LG G+FG V+         T D    AVK  +L+D  T   +     ++E  LL   +H
Sbjct: 22  ELGEGAFGKVFLAECYNLSPTKDKMLVAVK--ALKD-PTLAARK--DFQREAELLTNLQH 76

Query: 251 DNIVQYFGTEKVC 263
           ++IV+++G   VC
Sbjct: 77  EHIVKFYG---VC 86

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 46.4 bits (111), Expect = 3e-06
 Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 11/101 (10%)

Query: 165 DDAEISLLMELVYNFSLNE-----KYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAV 219
           ++  + +     ++FS  E                G  +G G FG VY+G+ ++    AV
Sbjct: 1   ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAV 59

Query: 220 KEVSLQD--QGTQGEQSVLQLEQEISLLGQFEHDNIVQYFG 258
           K+++        + +Q   Q +QEI ++ + +H+N+V+  G
Sbjct: 60  KKLAAMVDITTEELKQ---QFDQEIKVMAKCQHENLVELLG 97

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 13/75 (17%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
              +G G+FG V++        +      AVK   L+++ +   Q+    ++E +L+ +F
Sbjct: 52  VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVK--MLKEEASADMQA--DFQREAALMAEF 107

Query: 249 EHDNIVQYFGTEKVC 263
           ++ NIV+  G   VC
Sbjct: 108 DNPNIVKLLG---VC 119

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 46.4 bits (111), Expect = 3e-06
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 9/69 (13%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              LG+G FG V+ G+ +     AVK +    QG+    + L    E +L+ Q +H  +V
Sbjct: 18  VERLGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLA---EANLMKQLQHQRLV 71

Query: 255 QYFGTEKVC 263
           + +    V 
Sbjct: 72  RLYA---VV 77

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 46.4 bits (110), Expect = 4e-06
 Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
              +G GS+G V            A+K ++         + V +++ E+ L+ +  H NI
Sbjct: 31  KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90

Query: 254 VQYFGT 259
            + +  
Sbjct: 91  ARLYEV 96

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 45.8 bits (109), Expect = 5e-06
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 6/63 (9%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS-LLGQFEHDNIVQ 255
           +GSG+ G V++      G   AVK++      +  ++   ++  ++  +L   +   IVQ
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMRR----SGNKEENKRILMDLDVVLKSHDCPYIVQ 88

Query: 256 YFG 258
            FG
Sbjct: 89  CFG 91

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 195 GAPLGSGSFGSVYEG--FTDDGFFF--AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           G  LG G FGSV EG    +DG     AVK +         ++ + +   E + +  F H
Sbjct: 39  GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMK---LDNSSQREIEEFLSEAACMKDFSH 95

Query: 251 DNIVQYFGTEKVCI 264
            N+++  G   VCI
Sbjct: 96  PNVIRLLG---VCI 106

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 9/69 (13%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              +GSG FG V+ G+  +    A+K  ++++ G   E+  ++   E  ++ +  H  +V
Sbjct: 13  VQEIGSGQFGLVHLGYWLNKDKVAIK--TIRE-GAMSEEDFIE---EAEVMMKLSHPKLV 66

Query: 255 QYFGTEKVC 263
           Q +G   VC
Sbjct: 67  QLYG---VC 72

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 20/97 (20%)

Query: 180 SLNEKYRRRIMSWQK---------GAPLGSGSFGSVYEG--FTDDGFFF--AVKEVSLQD 226
           +LN +  + +                 +G G FG VY G    +DG     AVK  SL  
Sbjct: 6   ALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVK--SLNR 63

Query: 227 QGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEKVC 263
               GE S  Q   E  ++  F H N++   G   +C
Sbjct: 64  ITDIGEVS--QFLTEGIIMKDFSHPNVLSLLG---IC 95

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 12/76 (15%)

Query: 193 QKGAPLGSGSFGSVYEG-FTDDGFFF----AVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
           +K   LGSG+FG+VY+G +  +G       A+K   L++      ++  ++  E  ++  
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELRE--ATSPKANKEILDEAYVMAS 73

Query: 248 FEHDNIVQYFGTEKVC 263
            ++ ++ +  G   +C
Sbjct: 74  VDNPHVCRLLG---IC 86

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVS---LQDQGTQGEQSVLQLEQEISLLGQFEH 250
              LGSG+ G V   F        A+K +S         +     L +E EI +L +  H
Sbjct: 15  SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74

Query: 251 DNIVQYFGT 259
             I++    
Sbjct: 75  PCIIKIKNF 83

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 11/70 (15%)

Query: 198 LGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
           +GSG  G V  G            A+K  +L+   T+ ++       E S++GQF+H NI
Sbjct: 57  IGSGDSGEVCYGRLRVPGQRDVPVAIK--ALKAGYTERQRR--DFLSEASIMGQFDHPNI 112

Query: 254 VQYFGTEKVC 263
           ++  G   V 
Sbjct: 113 IRLEG---VV 119

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 12/76 (15%)

Query: 193 QKGAPLGSGSFGSVYEG-FTDDGFFF----AVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
           +K   LGSG FG+V++G +  +G        +K   ++D    G QS   +   +  +G 
Sbjct: 16  RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIK--VIED--KSGRQSFQAVTDHMLAIGS 71

Query: 248 FEHDNIVQYFGTEKVC 263
            +H +IV+  G   +C
Sbjct: 72  LDHAHIVRLLG---LC 84

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 45.8 bits (108), Expect = 7e-06
 Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 2/80 (2%)

Query: 178 NFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVL 236
            F +  +   R  +  +G  LG     +  E    + G  F V      ++        +
Sbjct: 61  PFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQM 120

Query: 237 QLE-QEISLLGQFEHDNIVQ 255
           + E   + LL   ++    +
Sbjct: 121 KEEVLRLRLLRGIKNQKQAK 140

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 14/73 (19%)

Query: 197 PLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
            LG G+FG V+     +          AVK  +L++  +  E +    ++E  LL   +H
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVK--ALKE-AS--ESARQDFQREAELLTMLQH 102

Query: 251 DNIVQYFGTEKVC 263
            +IV++FG   VC
Sbjct: 103 QHIVRFFG---VC 112

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 13/75 (17%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
           G  LG G FG V +               AVK   L++  +  E     L  E ++L Q 
Sbjct: 28  GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVK--MLKENASPSELR--DLLSEFNVLKQV 83

Query: 249 EHDNIVQYFGTEKVC 263
            H ++++ +G    C
Sbjct: 84  NHPHVIKLYG---AC 95

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 8/73 (10%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
           G  +GSGSFG+VY+G        AVK +++     Q  Q+      E+ +L +  H NI+
Sbjct: 29  GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNIL 83

Query: 255 QYFG---TEKVCI 264
            + G     ++ I
Sbjct: 84  LFMGYSTAPQLAI 96

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 45.0 bits (107), Expect = 9e-06
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 10/71 (14%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
           G  +G G FG VY G    +    A++ + ++      E  +   ++E+    Q  H+N+
Sbjct: 38  GELIGKGRFGQVYHGRWHGE---VAIRLIDIER---DNEDQLKAFKREVMAYRQTRHENV 91

Query: 254 VQYFGTEKVCI 264
           V + G    C+
Sbjct: 92  VLFMG---ACM 99

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 11/74 (14%)

Query: 195 GAPLGSGSFGSVYEG--FTDDGFFF--AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
              +G G FG VY G    +DG     AVK  SL      GE S  Q   E  ++  F H
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVK--SLNRITDIGEVS--QFLTEGIIMKDFSH 149

Query: 251 DNIVQYFGTEKVCI 264
            N++   G   +C+
Sbjct: 150 PNVLSLLG---ICL 160

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 194 KGAPLGSGSFGSVYEG-FTDDGFFF--AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +   LGSG+FG+V +G +         AVK   L++          +L  E +++ Q ++
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVK--ILKN-EANDPALKDELLAEANVMQQLDN 77

Query: 251 DNIVQYFGTEKVC 263
             IV+  G   +C
Sbjct: 78  PYIVRMIG---IC 87

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 10/70 (14%)

Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
              LG G +G VYEG +       AVK +    + T   +  L   +E +++ + +H N+
Sbjct: 18  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFL---KEAAVMKEIKHPNL 71

Query: 254 VQYFGTEKVC 263
           VQ  G   VC
Sbjct: 72  VQLLG---VC 78

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 12/71 (16%)

Query: 198 LGSGSFGSVYEGF-----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
           +G+G FG VY+G             A+K  +L+   T+ ++       E  ++GQF H N
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIK--TLKAGYTEKQRVDFL--GEAGIMGQFSHHN 107

Query: 253 IVQYFGTEKVC 263
           I++  G   V 
Sbjct: 108 IIRLEG---VI 115

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 9/69 (13%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              LG+G FG V+    +     AVK +        G  SV     E +++   +HD +V
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMK------PGSMSVEAFLAEANVMKTLQHDKLV 246

Query: 255 QYFGTEKVC 263
           +      V 
Sbjct: 247 KLHA---VV 252

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 16/74 (21%)

Query: 198 LGSGSFGSVYEG-FTDDGFFF-------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
           LG G+F  +++G   + G +         +K   L        +S  +     S++ +  
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLK--VLDKAHRNYSESFFE---AASMMSKLS 70

Query: 250 HDNIVQYFGTEKVC 263
           H ++V  +G   VC
Sbjct: 71  HKHLVLNYG---VC 81

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              LG G FG V+ G  +     A+K +     GT   ++ LQ   E  ++ +  H+ +V
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQ---EAQVMKKLRHEKLV 325

Query: 255 QYFGTEKVC 263
           Q +    V 
Sbjct: 326 QLYA---VV 331

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 11/70 (15%)

Query: 198 LGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
           +G+G FG V  G     +      A+K  +L+   T  E+       E S++GQF+H NI
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIK--TLKVGYT--EKQRRDFLGEASIMGQFDHPNI 108

Query: 254 VQYFGTEKVC 263
           ++  G   V 
Sbjct: 109 IRLEG---VV 115

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           W     LG G+  +V+ G     G  FA+K  +        +       +E  +L +  H
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD----VQMREFEVLKKLNH 66

Query: 251 DNIVQYF 257
            NIV+ F
Sbjct: 67  KNIVKLF 73

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           W     LG G+  +V+ G     G  FA+K  +        +       +E  +L +  H
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD----VQMREFEVLKKLNH 66

Query: 251 DNIVQ 255
            NIV+
Sbjct: 67  KNIVK 71

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 19/75 (25%), Positives = 26/75 (34%), Gaps = 11/75 (14%)

Query: 193 QKGAPLGSGSFGSVYEGFTDDGFFF----AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
                +G G FG VY G   D        A+K  SL        Q V    +E  L+   
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIK--SLSRITE--MQQVEAFLREGLLMRGL 79

Query: 249 EHDNIVQYFGTEKVC 263
            H N++   G   + 
Sbjct: 80  NHPNVLALIG---IM 91

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 183 EKYRRRIMSWQKGAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQE 241
            K +  I  +  G PLG G FG+VY      + F  A+K V  + Q  +      QL +E
Sbjct: 7   PKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALK-VLFKSQLEKEGV-EHQLRRE 64

Query: 242 ISLLGQFEHDNIVQYFGT 259
           I +     H NI++ +  
Sbjct: 65  IEIQSHLRHPNILRMYNY 82

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 10/69 (14%)

Query: 198 LGSGSFGSVYEGF---TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
           LG G+FGSV +G           A+K   L+  GT+ +    ++ +E  ++ Q ++  IV
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIK--VLKQ-GTE-KADTEEMMREAQIMHQLDNPYIV 73

Query: 255 QYFGTEKVC 263
           +  G   VC
Sbjct: 74  RLIG---VC 79

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           +G G+FG V+ G    D    AVK      + T       +  QE  +L Q+ H NIV+ 
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC----RETLPPDLKAKFLQEARILKQYSHPNIVRL 177

Query: 257 FGTEKVC 263
            G   VC
Sbjct: 178 IG---VC 181

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
              +G G F  V      + G  FAVK V +    +    S   L++E S+    +H +I
Sbjct: 29  CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88

Query: 254 VQYFGT 259
           V+   T
Sbjct: 89  VELLET 94

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 12/76 (15%)

Query: 193 QKGAPLGSGSFGSVYEG-FTDDGFFF----AVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
           +K   LGSG+FG+VY+G +  +G       A+K   L++      ++  ++  E  ++  
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELRE--ATSPKANKEILDEAYVMAS 73

Query: 248 FEHDNIVQYFGTEKVC 263
            ++ ++ +  G   +C
Sbjct: 74  VDNPHVCRLLG---IC 86

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           LG G FG VY+G   DG   AVK   L+++ TQG +   Q + E+ ++    H N+++  
Sbjct: 38  LGRGGFGKVYKGRLADGTLVAVK--RLKEERTQGGEL--QFQTEVEMISMAVHRNLLRLR 93

Query: 258 G 258
           G
Sbjct: 94  G 94

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 10/69 (14%)

Query: 198 LGSGSFGSVYEGF--TDDGFFF-AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
           LG G+FGSV +G           A+K   L+      +    ++ +E  ++ Q ++  IV
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIK--VLKQGTE--KADTEEMMREAQIMHQLDNPYIV 399

Query: 255 QYFGTEKVC 263
           +  G   VC
Sbjct: 400 RLIG---VC 405

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              LG G FG V+ G  +     A+K +     GT   ++ LQ   E  ++ +  H+ +V
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQ---EAQVMKKLRHEKLV 242

Query: 255 QYFGTEKVC 263
           Q +    V 
Sbjct: 243 QLYA---VV 248

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 11/73 (15%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF---AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EH 250
              +G G+FG V +            A+K   +++  ++ +        E+ +L +   H
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIK--RMKEYASKDDHR--DFAGELEVLCKLGHH 85

Query: 251 DNIVQYFGTEKVC 263
            NI+   G    C
Sbjct: 86  PNIINLLG---AC 95

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 10/70 (14%)

Query: 195 GAPLGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
              LG G +G VYEG +       AVK +    + T   +  L+   E +++ + +H N+
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLK---EAAVMKEIKHPNL 278

Query: 254 VQYFGTEKVC 263
           VQ  G   VC
Sbjct: 279 VQLLG---VC 285

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)

Query: 195 GAPLGSGSFGSVYEG--FTDDGFFF--AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           G  +G G FG V++G   + +      A+K  + ++  +   +      QE   + QF+H
Sbjct: 20  GRCIGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFL--QEALTMRQFDH 75

Query: 251 DNIVQYFGTEKVC 263
            +IV+  G   V 
Sbjct: 76  PHIVKLIG---VI 85

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 11/70 (15%)

Query: 198 LGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
           LG G FG VYEG       +    AVK      +      +  +   E  ++   +H +I
Sbjct: 20  LGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCT-LDNKEKFMSEAVIMKNLDHPHI 75

Query: 254 VQYFGTEKVC 263
           V+  G   + 
Sbjct: 76  VKLIG---II 82

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 11/69 (15%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              +G G FG V  G    G   AVK   +++  T           E S++ Q  H N+V
Sbjct: 26  LQTIGKGEFGDVMLG-DYRGNKVAVK--CIKNDATAQA-----FLAEASVMTQLRHSNLV 77

Query: 255 QYFGTEKVC 263
           Q  G   V 
Sbjct: 78  QLLG---VI 83

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 42.4 bits (99), Expect = 9e-05
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 187 RRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
           +    W+    LG+G FG V      D G   A+K+   +       ++  +   EI ++
Sbjct: 11  QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE----LSPKNRERWCLEIQIM 66

Query: 246 GQFEHDNIVQ 255
            +  H N+V 
Sbjct: 67  KKLNHPNVVS 76

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)

Query: 195 GAPLGSGSFGSVYEG--FTDDGFFF--AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           G  +G G FG V++G   + +      A+K  + ++  +   +      QE   + QF+H
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFL--QEALTMRQFDH 450

Query: 251 DNIVQYFGTEKVC 263
            +IV+  G   V 
Sbjct: 451 PHIVKLIG---VI 460

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 16/78 (20%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF--------AVKEVSLQDQGTQGEQSVLQLEQEISLLG 246
           G PLG G+FG V                   AVK   L+D  T+ + S   L  E+ ++ 
Sbjct: 40  GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLS--DLVSEMEMMK 95

Query: 247 QF-EHDNIVQYFGTEKVC 263
              +H NI+   G    C
Sbjct: 96  MIGKHKNIINLLG---AC 110

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 19/126 (15%), Positives = 39/126 (30%), Gaps = 10/126 (7%)

Query: 132 SLEDVSSSEYTMTEAAEAGRFQDLFDDVASISDDDAEISLLMELVYNFSLNEKYRRRIMS 191
            +E++ +          +   Q   D + S S  +      +E      L E+ R  +  
Sbjct: 28  VIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESE----LGERPRTLVR- 82

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLE-QEISLLGQFE 249
              G  LG     +  E    + G  F V      ++        ++ E   + LL   +
Sbjct: 83  ---GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139

Query: 250 HDNIVQ 255
           +    +
Sbjct: 140 NQKQAK 145

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
              LGSG++G V            A+K +      T       +L +E+++L   +H NI
Sbjct: 42  VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS---KLLEEVAVLKLLDHPNI 98

Query: 254 VQYFGT 259
           ++ +  
Sbjct: 99  MKLYDF 104

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 162 ISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVK 220
           +       S    L +  +  E+Y            LG GSFG V +         +AVK
Sbjct: 1   MHHHHHHSSGRENLYFQGTFAERY-------NIVCMLGKGSFGEVLKCKDRITQQEYAVK 53

Query: 221 EVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT 259
            ++      +   ++    +E+ LL + +H NI++ F  
Sbjct: 54  VINKASAKNKDTSTI---LREVELLKKLDHPNIMKLFEI 89

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
              LG GSFG V        G   AVK   +  +  + +     L +E+ LL Q +H NI
Sbjct: 31  QRVLGKGSFGEVILCKDKITGQECAVK--VISKRQVKQKTDKESLLREVQLLKQLDHPNI 88

Query: 254 VQYFGT 259
           ++ +  
Sbjct: 89  MKLYEF 94

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 14/76 (18%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
           G PLG G+FG V E               AVK   L++  T  E     L  E+ +L   
Sbjct: 32  GKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHR--ALMSELKILIHI 87

Query: 249 -EHDNIVQYFGTEKVC 263
             H N+V   G    C
Sbjct: 88  GHHLNVVNLLG---AC 100

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 16/78 (20%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF--------AVKEVSLQDQGTQGEQSVLQLEQEISLLG 246
           G PLG G+FG V                   AVK   L+   T+ + S   L  E+ ++ 
Sbjct: 74  GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK--MLKSDATEKDLS--DLISEMEMMK 129

Query: 247 QF-EHDNIVQYFGTEKVC 263
              +H NI+   G    C
Sbjct: 130 MIGKHKNIINLLG---AC 144

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 187 RRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
           + I  +  G  LG GS+G V E   ++     AVK +  + +  +       +++EI LL
Sbjct: 2   KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILK-KKKLRRIPNGEANVKKEIQLL 60

Query: 246 GQFEHDNIVQ 255
            +  H N++Q
Sbjct: 61  RRLRHKNVIQ 70

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 22/96 (22%)

Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVS----------------- 223
           +     ++  +     +G GS+G V   +  +D  ++A+K +S                 
Sbjct: 5   SSGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPR 64

Query: 224 ----LQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
                     Q    + Q+ QEI++L + +H N+V+
Sbjct: 65  GTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVK 100

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 11/69 (15%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              +G G FG V  G    G   AVK   +++  T           E S++ Q  H N+V
Sbjct: 198 LQTIGKGEFGDVMLG-DYRGNKVAVK--CIKNDATAQA-----FLAEASVMTQLRHSNLV 249

Query: 255 QYFGTEKVC 263
           Q  G   V 
Sbjct: 250 QLLG---VI 255

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 14/76 (18%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
           G  LG+G+FG V E               AVK   L+      E+    L  E+ +L   
Sbjct: 28  GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK--MLKPSAHLTERE--ALMSELKVLSYL 83

Query: 249 -EHDNIVQYFGTEKVC 263
             H NIV   G    C
Sbjct: 84  GNHMNIVNLLG---AC 96

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 16/78 (20%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF--------AVKEVSLQDQGTQGEQSVLQLEQEISLLG 246
           G PLG G FG V                   AVK   L+D  T+ + S   L  E+ ++ 
Sbjct: 86  GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLS--DLVSEMEMMK 141

Query: 247 QF-EHDNIVQYFGTEKVC 263
              +H NI+   G    C
Sbjct: 142 MIGKHKNIINLLG---AC 156

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 162 ISDDDAEISLLMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVK 220
           +       S    L +  +  E+Y            LG GSFG V +         +AVK
Sbjct: 1   MHHHHHHSSGRENLYFQGTFAERY-------NIVCMLGKGSFGEVLKCKDRITQQEYAVK 53

Query: 221 EVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT 259
            ++      +   ++    +E+ LL + +H NI++ F  
Sbjct: 54  VINKASAKNKDTSTI---LREVELLKKLDHPNIMKLFEI 89

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 10/71 (14%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
           R + +S+     +G+GSFG VY+    D G   A+K+V LQD+  +         +E+ +
Sbjct: 50  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN--------RELQI 100

Query: 245 LGQFEHDNIVQ 255
           + + +H NIV+
Sbjct: 101 MRKLDHCNIVR 111

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 9/70 (12%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
            +R +++     +G+GSFG V++    +    A+K+V LQD+  +         +E+ ++
Sbjct: 36  EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKRFKN--------RELQIM 86

Query: 246 GQFEHDNIVQ 255
              +H N+V 
Sbjct: 87  RIVKHPNVVD 96

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 14/76 (18%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
           G  LGSG+FG V                 AVK   L+++    E+    L  E+ ++ Q 
Sbjct: 50  GKVLGSGAFGKVMNATAYGISKTGVSIQVAVK--MLKEKADSSERE--ALMSELKMMTQL 105

Query: 249 -EHDNIVQYFGTEKVC 263
             H+NIV   G    C
Sbjct: 106 GSHENIVNLLG---AC 118

>2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} Length = 26

 Score = 35.9 bits (82), Expect = 4e-04
 Identities = 15/23 (65%), Positives = 19/23 (82%)

Query: 23 RRWRSFCTIVKNPTRRFRMVANL 45
          +RWRS  +IVKN  RRFRM++NL
Sbjct: 3  QRWRSSVSIVKNRARRFRMISNL 25

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 17/85 (20%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFF------AVKEVSLQDQGTQGEQSVLQLE 239
           R  +   Q G  LG+G+FG V E               AVK   L+      E+    L 
Sbjct: 45  RNNL---QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK--MLKSTAHADEKE--ALM 97

Query: 240 QEISLLGQF-EHDNIVQYFGTEKVC 263
            E+ ++    +H+NIV   G    C
Sbjct: 98  SELKIMSHLGQHENIVNLLG---AC 119

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 183 EKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVL-QLEQ 240
           ++       +Q G  LGSG FGSVY G    D    A+K V        GE     ++  
Sbjct: 36  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95

Query: 241 EISLLGQFEHD--NIVQ 255
           E+ LL +       +++
Sbjct: 96  EVVLLKKVSSGFSGVIR 112

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVS---LQDQGTQGEQSVLQLEQEISLLGQFEH 250
            +PLGSG+FG V+     +      VK +    + +     +  + ++  EI++L + EH
Sbjct: 29  MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH 88

Query: 251 DNIVQ 255
            NI++
Sbjct: 89  ANIIK 93

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVS-LQDQGTQGEQSVLQLE 239
            +        ++ G  LG G FG+V+ G    D    A+K +   +  G       +   
Sbjct: 23  GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82

Query: 240 QEISLL----GQFEHDNIVQ 255
            E++LL        H  +++
Sbjct: 83  LEVALLWKVGAGGGHPGVIR 102

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 9/74 (12%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVS--------LQDQGTQGEQSVLQLEQEISLL 245
              LGSG++G V      +     A+K +           D     E+   ++  EISLL
Sbjct: 41  VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100

Query: 246 GQFEHDNIVQYFGT 259
              +H NI++ F  
Sbjct: 101 KSLDHPNIIKLFDV 114

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
              LGSG+F  V+       G  FA+K +         + S+   E EI++L + +H+NI
Sbjct: 14  MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR--DSSL---ENEIAVLKKIKHENI 68

Query: 254 VQYFGT 259
           V     
Sbjct: 69  VTLEDI 74

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 9/85 (10%)

Query: 173 MELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQG 231
           M L    + +E+ R+ +  +Q     G G+FG+V  G     G   A+K+V +QD   + 
Sbjct: 6   MSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRFR- 63

Query: 232 EQSVLQLE-QEISLLGQFEHDNIVQ 255
                  E Q +  L    H NIVQ
Sbjct: 64  -----NRELQIMQDLAVLHHPNIVQ 83

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
              LGSG+FG V+       G    +K ++      + +  + Q+E EI +L   +H NI
Sbjct: 27  KRKLGSGAFGDVHLVEERSSGLERVIKTINK----DRSQVPMEQIEAEIEVLKSLDHPNI 82

Query: 254 VQYFGT 259
           ++ F  
Sbjct: 83  IKIFEV 88

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 39.1 bits (92), Expect = 9e-04
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 195 GAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
              LG G+F  V        G  FA K ++ +    +  Q +   E+E  +  + +H NI
Sbjct: 11  KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKL---EREARICRKLQHPNI 67

Query: 254 VQYFGT 259
           V+   +
Sbjct: 68  VRLHDS 73

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	264
4aqr_D	57	Calcium-transporting ATPase 8, plasma membrane-TY;	99.81
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.33
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.32
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.29
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.28
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.28
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.26
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.25
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.25
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.25
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.23
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.2
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.18
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.13
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.08
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.06
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.03
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.02
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.97
2l1w_B	26	Vacuolar calcium ATPase BCA1 peptide; calmodulin,	98.93
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.92
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.91
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.9
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	98.88
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.86
3niz_A	311	Rhodanese family protein; structural genomics, str	98.84
3uqc_A	286	Probable conserved transmembrane protein; structur	98.84
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	98.83
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.83
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.83
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.83
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.82
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.82
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.82
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.81
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.81
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	98.81
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.81
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	98.81
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.81
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	98.81
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.81
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.8
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.79
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.79
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.79
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.79
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.79
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.79
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.79
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.79
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.79
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.79
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.78
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.78
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	98.78
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.78
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.78
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.78
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	98.78
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.78
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.77
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.77
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.77
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.77
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.77
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.76
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.76
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.76
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.76
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.76
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.75
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	98.75
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.75
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	98.75
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.75
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.75
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.74
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.74
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.74
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.74
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.74
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.74
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.74
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.74
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.74
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.74
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.74
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	98.73
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	98.73
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.73
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	98.73
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.72
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.72
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.72
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.72
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.72
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.72
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.72
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.72
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.71
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.71
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.71
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.71
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.71
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.71
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.71
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.71
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.7
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.7
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.7
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.7
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.7
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.69
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.69
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.69
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.69
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.69
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.68
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.68
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	98.68
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.68
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.68
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.68
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.68
3bhy_A	283	Death-associated protein kinase 3; death associate	98.67
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.67
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.67
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	98.67
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	98.67
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.67
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.67
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.67
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.67
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.67
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.66
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.66
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.66
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	98.66
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.66
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.66
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.66
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.66
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.66
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.65
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.65
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.65
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.65
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.65
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.65
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.65
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.65
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.65
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.64
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.64
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.64
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.64
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.64
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.64
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.64
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.63
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.63
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.63
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	98.63
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.62
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.62
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.62
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.62
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.61
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.61
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.61
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.6
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.6
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.6
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.59
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.59
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.59
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.59
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.59
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.59
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.58
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.58
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.58
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.58
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.58
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.58
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.58
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.58
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.58
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.57
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.57
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.57
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.56
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.56
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.55
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.55
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.54
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.54
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.54
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.53
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.53
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.53
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.53
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.53
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	98.52
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.52
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.52
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.52
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.51
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.51
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.51
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.5
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.49
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.47
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.47
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.47
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.46
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.46
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.46
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.46
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.44
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.43
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.42
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.42
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.42
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.41
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.38
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.38
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.36
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.35
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.35
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.35
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.33
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.31
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.26
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.26
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.26
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.26
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.25
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.24
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.23
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.23
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.22
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.2
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.19
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.18
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.14
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.14
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.12
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.1
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	97.98
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.92
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.69
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.67
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	96.86
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	95.09
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	93.01
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	92.08
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	88.64

>4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana}

Probab=99.81  E-value=4.9e-21  Score=122.51  Aligned_cols=56  Identities=27%  Similarity=0.504  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHhhhhhhccccccchhccccccccHHHHHHHHHHHHHHH-HHHHHHHHHHHHc
Q 024683           17 PSRESLRRWRSFCTIVKNPTRRFRMVANLDRRSEADKKIRQMQEQLRL-ALCIRDTLKLIES   77 (264)
Q Consensus        17 ~~~~~~~rwr~a~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~a   77 (264)
                      +|+|+|+|||+|+ ||+||+||||||+||+|++++++++    .|+|+ +.+++||++|++.
T Consensus         1 ~s~e~L~rWR~a~-lVlNa~RRFR~t~dL~K~~e~~~~~----rkiR~~~~v~rAa~~F~~~   57 (57)
T 4aqr_D            1 SSIERLQQWRKAA-LVLNASRRFRYTLDLKKEQETREMR----QKIRSHAHALLAANRFMDM   57 (57)
T ss_dssp             CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHC
T ss_pred             CcHHHHHHHHHHH-HHhchHhhhhhhcchhhHHHHHHHH----HHHHHHHHHHHHHHHhhcC
Confidence            4789999999995 9999999999999999999888854    57887 5599999999973

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.33  E-value=2.5e-12  Score=115.52  Aligned_cols=69  Identities=25%  Similarity=0.438  Sum_probs=55.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++.....   .......+.+|+.+|+.|+|||||++++++
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~   92 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM---SSKEREESRREVAVLANMKHPNIVQYRESF   92 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC---CHHHHHHHHHHHHHHHHCCCCCCCcEEEEE
Confidence            57899999999999999999999 7899999999986432   445667899999999999999999999984

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.32  E-value=2.5e-12  Score=113.16  Aligned_cols=68  Identities=29%  Similarity=0.510  Sum_probs=57.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .+|..||||.+....    .......+.+|+.+|+.++|||||++++++
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~~~~~E~~il~~l~HpnIV~~~~~~   72 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN----RELAREKVMREVKALAKLEHPGIVRYFNAW   72 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            45699999999999999999999 789999999998632    344567899999999999999999999975

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.29  E-value=4.2e-12  Score=111.72  Aligned_cols=67  Identities=25%  Similarity=0.454  Sum_probs=55.1

Q ss_pred             CCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ++|.+.+.||+|+||.||+|.+      .++..||||.++.     ......+.|.+|+.+|++++|||||+++|+|.
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-----~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~   85 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD-----ASDNARKDFHREAELLTNLQHEHIVKFYGVCV   85 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS-----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC-----CChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence            5688999999999999999986      2467899999975     24556678999999999999999999999963

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.28  E-value=5.7e-12  Score=112.30  Aligned_cols=67  Identities=28%  Similarity=0.456  Sum_probs=57.1

Q ss_pred             CCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|.+.+.||+|+||.||+|.+      .++..||||.++.     ......+.|.+|+.+|++++|||||+++|+|.
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-----~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~  113 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-----ASESARQDFQREAELLTMLQHQHIVRFFGVCT  113 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC-----CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc-----CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            5688899999999999999986      2477899999975     24556778999999999999999999999963

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.28  E-value=1.4e-12  Score=115.27  Aligned_cols=69  Identities=22%  Similarity=0.281  Sum_probs=59.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++.+...  ........+.+|+.+|+.++|||||+++++
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~  100 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFVKLYFT  100 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            46799999999999999999999 8899999999985321  122345679999999999999999999998

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.26  E-value=6.6e-12  Score=109.16  Aligned_cols=70  Identities=27%  Similarity=0.368  Sum_probs=54.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++.+...  ........+.+|+.+|+.++|||||++++++
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~   82 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL--AKSDMQGRIEREISYLRLLRHPHIIKLYDVI   82 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHc--CCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE
Confidence            46899999999999999999999 7899999999986432  1233456799999999999999999999983

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.25  E-value=1.5e-11  Score=107.78  Aligned_cols=66  Identities=23%  Similarity=0.404  Sum_probs=56.8

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |.+...||+|+||.||+|.+ .++..||+|.+.....   .......|.+|+.+|+.++|||||++++++
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~   94 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSW   94 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            36677899999999999999 7889999999986432   445567899999999999999999999974

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.25  E-value=1.1e-11  Score=113.09  Aligned_cols=69  Identities=20%  Similarity=0.252  Sum_probs=59.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++....   ........+.+|+.+|+.++|||||++++++
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~  122 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF---DVVTNAKRTLRELKILKHFKHDNIIAIKDIL  122 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc---cchHHHHHHHHHHHHHHhcCCCCcceEeeee
Confidence            35799999999999999999999 889999999997532   2445567889999999999999999999873

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.25  E-value=7.4e-12  Score=110.55  Aligned_cols=68  Identities=22%  Similarity=0.316  Sum_probs=55.0

Q ss_pred             CCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++.+.+.||+|+||.||+|.+      .++..||||.+....    .......|.+|+.+|++++|||||+|+|+|.
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~----~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~   99 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA----EGPLREEFRHEAMLRARLQHPNVVCLLGVVT   99 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C----CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc----ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence            4567889999999999999986      246789999997532    2334578999999999999999999999963

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.23  E-value=6.4e-12  Score=112.66  Aligned_cols=66  Identities=26%  Similarity=0.394  Sum_probs=57.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|...+.||+|+||.||+|.+ .+|..||||++.....     .....+.+|+.+|+.++|||||++++++
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-----~~~~~~~~Ei~il~~l~HpnIV~l~~~~  140 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEMYNSY  140 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-----SSGGGGHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-----hHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            4699999999999999999999 7899999999986432     2234578999999999999999999984

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.20  E-value=1.4e-11  Score=113.22  Aligned_cols=66  Identities=26%  Similarity=0.394  Sum_probs=57.3

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|...+.||+|+||.||+|.+ .+|..||||++.....     .....+.+|+.+|+.++|||||+|++++
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-----~~~~~~~~Ei~il~~l~HpnIV~l~~~~  217 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEMYNSY  217 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-----SSGGGHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-----hHHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence            4699999999999999999999 7899999999986432     2234688999999999999999999984

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.18  E-value=4.1e-11  Score=105.76  Aligned_cols=67  Identities=28%  Similarity=0.391  Sum_probs=56.8

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+++.+.+.||+|+||.||+|.+.  ..||||+++...   ........|.+|+.+|++++|||||+++|+|
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~---~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~  101 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD---PTPEQFQAFRNEVAVLRKTRHVNILLFMGYM  101 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSS---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecC---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            457788999999999999999873  359999997532   2456678899999999999999999999985

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.13  E-value=5.5e-11  Score=104.56  Aligned_cols=65  Identities=28%  Similarity=0.341  Sum_probs=51.2

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|.+.+.||+|+||.||+|.+ +|..||||++..      .......+..|+..+..++|||||+++|+|.
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~------~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~   67 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS------REERSWFREAEIYQTVMLRHENILGFIAADN   67 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECG------GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECc------cchhhHHHHHHHHHHhcCCCCCCCcEEEEEE
Confidence            3578889999999999999998 688999999974      2222223345666667899999999999964

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.08  E-value=2.1e-10  Score=109.34  Aligned_cols=66  Identities=24%  Similarity=0.327  Sum_probs=58.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||+|.+...     .......+.+|+.+|..++|||||+|+++
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~-----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~  222 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP-----HESDKETVRKEIQTMSVLRHPTLVNLHDA  222 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----SHHHHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc-----chhhHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            46899999999999999999999 88999999999852     34455778999999999999999999998

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.06  E-value=8.9e-11  Score=104.83  Aligned_cols=62  Identities=27%  Similarity=0.355  Sum_probs=54.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+ .+|..||||+++....          ..+|+.+|..++|||||++++++
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~  119 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAV  119 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----------HHHHHHHHHhCCCCCCCcEEEEE
Confidence            45688999999999999999999 7899999999986321          24799999999999999999984

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.03  E-value=3e-11  Score=106.50  Aligned_cols=68  Identities=22%  Similarity=0.246  Sum_probs=50.4

Q ss_pred             CCeeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|.+.+.||+|+||.||+|.+    .++..||||++.....   .......+.+|+.+|..++|||||++++++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~~~~   95 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL---KVRDRVRTKMERDILVEVNHPFIVKLHYAF   95 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE---EEEECC------CCCCCCCCTTEECEEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc---ChHHHHHHHHHHHHHHHCCCCCCCeEEEEE
Confidence            5799999999999999999987    2577899999975332   112223678999999999999999999983

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.02  E-value=4.2e-10  Score=101.15  Aligned_cols=69  Identities=28%  Similarity=0.299  Sum_probs=57.0

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cC-----CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCC-CCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DD-----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH-DNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~-----g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~H-pNIV~l~g~~  260 (264)
                      ..++|.+.+.||+|+||.||+|.+ ..     +..||||.+...    ........+.+|+.+|.+++| ||||+++|+|
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~----~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~  137 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRALMSELKILIHIGHHLNVVNLLGAC  137 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc----cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence            356899999999999999999987 22     357999999752    234556789999999999965 9999999986

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.97  E-value=8.6e-10  Score=96.45  Aligned_cols=69  Identities=28%  Similarity=0.487  Sum_probs=58.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||++....    .......+.+|+.+|..++|||||++++++.
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   74 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN----RELAREKVMREVKALAKLEHPGIVRYFNAWL   74 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS----TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEE
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC----chhHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            46789999999999999999999 689999999998532    3345578999999999999999999999863

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.92  E-value=3.4e-09  Score=93.88  Aligned_cols=69  Identities=23%  Similarity=0.299  Sum_probs=60.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .+|..||||.+.....   .......+.+|+.+|..++||||+++++++
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~   83 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL---NPTSLQKLFREVRIMKILNHPNIVKLFEVI   83 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            57899999999999999999999 8899999999986332   345567789999999999999999999984

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.91  E-value=3.5e-09  Score=91.43  Aligned_cols=68  Identities=28%  Similarity=0.456  Sum_probs=59.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.+|..++|||||++++++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   70 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD---DEGVPSSALREICLLKELKHKNIVRLHDVL   70 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS---STTHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC---cCCcchHHHHHHHHHhcCCCCCEeeEEeEE
Confidence            5799999999999999999999 7889999999986432   344557788999999999999999999984

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.90  E-value=2.3e-09  Score=98.85  Aligned_cols=69  Identities=20%  Similarity=0.347  Sum_probs=51.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++....   ........+.+|+.+|..++|||||++++++
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  121 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF---EDLIDCKRILREIAILNRLNHDHVVKVLDIV  121 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTT---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh---cCHHHHHHHHHHHHHHHhCCCCCCCceEEEE
Confidence            46899999999999999999998 788999999997522   2455567899999999999999999999985

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=98.88  E-value=4.9e-09  Score=91.32  Aligned_cols=68  Identities=22%  Similarity=0.378  Sum_probs=59.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||++.+ .++..||+|.+..     ........+.+|+.+|..++|||||++++++.
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   77 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR-----FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY   77 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC-----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc-----CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe
Confidence            46789999999999999999999 7889999999864     24566778999999999999999999999853

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.86  E-value=1.4e-09  Score=95.33  Aligned_cols=71  Identities=27%  Similarity=0.427  Sum_probs=60.6

Q ss_pred             HHHhcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          185 YRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       185 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +...+++|...+.||+|+||.||+|.+.+|..||||.+...     .......+.+|+.+|..++|||||++++++
T Consensus        34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  104 (321)
T 2qkw_B           34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-----SSQGIEEFETEIETLSFCRHPHLVSLIGFC  104 (321)
T ss_dssp             CCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC-----CSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred             HHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc-----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            34457899999999999999999999867889999998752     233456789999999999999999999984

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.84  E-value=5.1e-09  Score=91.69  Aligned_cols=69  Identities=30%  Similarity=0.465  Sum_probs=57.0

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+..|..||+|.+.....   .......+.+|+.+|..++|||||++++++
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   88 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE---DEGIPSTAIREISLLKELHHPNIVSLIDVI   88 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC---------CHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc---cchhhHHHHHHHHHHHHcCCCCEeeeeeEE
Confidence            678999999999999999999996689999999975321   233456788999999999999999999984

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.84  E-value=8.9e-09  Score=89.31  Aligned_cols=70  Identities=7%  Similarity=-0.042  Sum_probs=60.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||||.+.....  ........+.+|+.++..++|||||++++++
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~  100 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV--LPDDVLQETLSRTLRLSRIDKPGVARVLDVV  100 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC--SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc--cCHHHHHHHHHHHHHHhcCCCCCcceeeEEE
Confidence            36799999999999999999999 6789999999986332  2345567899999999999999999999884

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=98.83  E-value=6.9e-09  Score=89.64  Aligned_cols=67  Identities=34%  Similarity=0.448  Sum_probs=58.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|.+.+.||+|+||.||+|.+     .++..||||.+..     ........+.+|+.+|..++||||+++++++
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   80 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-----STEEHLRDFEREIEILKSLQHDNIVKYKGVC   80 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC-----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc-----CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            45789999999999999999983     4688999999975     2455567899999999999999999999975

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.83  E-value=3.4e-09  Score=102.37  Aligned_cols=71  Identities=25%  Similarity=0.295  Sum_probs=54.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCC-CcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQG-TQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~-~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++.+.... ............++.++..++|||||+|+++
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~  260 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA  260 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE
Confidence            57899999999999999999999 88999999999853211 0112222233345677888899999999988

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.83  E-value=4.7e-09  Score=90.55  Aligned_cols=68  Identities=28%  Similarity=0.488  Sum_probs=57.3

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||+|.+.+|..||+|.+.....   .......+.+|+.+|..++|||||++++++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   69 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVKLYDVI   69 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG---GGCCCHHHHHHHHGGGGCCCTTBCCEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc---ccccchhHHHHHHHHHhcCCCCEeeeeeEE
Confidence            57899999999999999999987788999999975321   222346788999999999999999999984

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.83  E-value=8.8e-09  Score=90.76  Aligned_cols=66  Identities=23%  Similarity=0.297  Sum_probs=57.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .+|..||+|.+..      .......+.+|+.+|..++|||||++++++
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~------~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~   70 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV------KGTDQVLVKKEISILNIARHRNILHLHESF   70 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC------CTHHHHHHHHHHHHHHHSCCTTBCCEEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEec------CcccHHHHHHHHHHHHhCCCCCCCeEeEEE
Confidence            56899999999999999999999 7889999999974      233456788999999999999999999984

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.82  E-value=1.3e-08  Score=88.56  Aligned_cols=70  Identities=24%  Similarity=0.387  Sum_probs=58.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+....   ........+.+|+.++..++||||+++++++.
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   72 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE---DDPVIKKIALREIRMLKQLKHPNLVNLLEVFR   72 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC---C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc---cchHHHHHHHHHHHHHHhCCCCCccchhheee
Confidence            46799999999999999999999 779999999987532   23445677889999999999999999999843

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.82  E-value=1e-08  Score=91.89  Aligned_cols=69  Identities=23%  Similarity=0.371  Sum_probs=59.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.+|..++|||||++++++
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~   97 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRKLQHPNIVRLHDSI   97 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            45799999999999999999999 7889999999986332   345567799999999999999999999974

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.82  E-value=3.2e-09  Score=94.71  Aligned_cols=65  Identities=20%  Similarity=0.190  Sum_probs=50.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .++..||||.+...       .....+.+|+.+|..++|||||++++++
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~  117 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT-------VDKKIVRTEIGVLLRLSHPNIIKLKEIF  117 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------CHHHHHCCCTTBCCEEEEE
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc-------hhHHHHHHHHHHHHhCCCCCCcceeeeE
Confidence            56799999999999999999999 67889999999852       1235678999999999999999999985

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.81  E-value=4.4e-09  Score=93.77  Aligned_cols=72  Identities=25%  Similarity=0.306  Sum_probs=58.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||||.+...............+.+|+.+|..++|||||++++++
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~   95 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY   95 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            34689999999999999999999 7899999999975321111112346789999999999999999999974

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=98.81  E-value=1.3e-08  Score=88.22  Aligned_cols=70  Identities=21%  Similarity=0.325  Sum_probs=60.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .++..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~   80 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR--EKEETLKRFEREVHNSSQLSHQNIVSMIDVD   80 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS--CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc--ccHHHHHHHHHHHHHHhcCCCCCCceEEEee
Confidence            46799999999999999999998 7889999999975332  2455667899999999999999999999984

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.81  E-value=7.5e-09  Score=96.06  Aligned_cols=69  Identities=23%  Similarity=0.306  Sum_probs=60.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||++....   ........+.+|+.+|..++|||||++++++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~  130 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIISLLNVF  130 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG---GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc---cChHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            57899999999999999999998 788999999998532   2445567889999999999999999999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=98.81  E-value=3.3e-09  Score=93.62  Aligned_cols=76  Identities=17%  Similarity=0.284  Sum_probs=61.1

Q ss_pred             HHHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          185 YRRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       185 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +....+.|...+.||+|+||.||+|.+ .++..||+|.+...............+.+|+.+|..++|||||++++++
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   97 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY   97 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh
Confidence            344467899999999999999999999 7889999999975321111234567899999999999999999999985

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.81  E-value=1.4e-08  Score=87.01  Aligned_cols=69  Identities=23%  Similarity=0.371  Sum_probs=60.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   74 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRKLQHPNIVRLHDSI   74 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC---CHHHHHHHHHHHHHHHHcCCCCcCeEEEEE
Confidence            57899999999999999999999 7789999999986332   345567789999999999999999999974

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=98.81  E-value=1e-08  Score=89.78  Aligned_cols=68  Identities=28%  Similarity=0.382  Sum_probs=58.6

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|.+.+.||+|+||.||+|.+ .|..||||.+....   ........+.+|+.+|..++|||||++++++
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  103 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQD---FHAERVNEFLREVAIMKRLRHPNIVLFMGAV  103 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCC---CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCC---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            46799999999999999999987 67899999997533   2455567899999999999999999999984

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.81  E-value=1.2e-08  Score=89.72  Aligned_cols=70  Identities=27%  Similarity=0.387  Sum_probs=59.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+....   ........+.+|+.++..++||||+++++++.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   94 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD---DDKMVKKIAMREIKLLKQLRHENLVNLLEVCK   94 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS---SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC---CchHHHHHHHHHHHHHhhCCCCCEeeEEEEee
Confidence            56899999999999999999999 778999999987532   23445567889999999999999999999853

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.80  E-value=1.4e-08  Score=91.17  Aligned_cols=69  Identities=23%  Similarity=0.292  Sum_probs=59.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .+|..||||.+....   ........+.+|+.++..++|||||++++++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   93 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIIGLLNVF   93 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc---CChHHHHHHHHHHHHHHhcCCCCccceEEee
Confidence            57899999999999999999998 788999999998532   2445567789999999999999999999875

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.79  E-value=8.5e-09  Score=92.38  Aligned_cols=66  Identities=21%  Similarity=0.147  Sum_probs=57.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+|..||||.+....      .....+.+|+.+++.++|||||++++++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~   85 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA------AIDENVQREIINHRSLRHPNIVRFKEVI   85 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST------TSCHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc------cccHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            56899999999999999999999 789999999998532      2225678999999999999999999984

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.79  E-value=9.6e-09  Score=90.51  Aligned_cols=69  Identities=23%  Similarity=0.463  Sum_probs=56.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|.+.+.||+|+||.||+|.+ .++..||||.+....    .......+.+|+.++..++|||||++++++.
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~   75 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----AVDCPENIKKEICINKMLNHENVVKFYGHRR   75 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccc----ccchHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            57899999999999999999999 788999999997532    1223356889999999999999999999843

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.79  E-value=9.2e-09  Score=89.07  Aligned_cols=73  Identities=25%  Similarity=0.426  Sum_probs=54.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc---------------------ChHHHHHHHHHHHHHh
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ---------------------GEQSVLQLEQEISLLG  246 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~---------------------~~~~~~~~~~Ei~iL~  246 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||.+........                     .......+.+|+.+|.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            57899999999999999999998 7889999999975431100                     0112356889999999


Q ss_pred             cCCCCCceeeeeeee
Q 024683          247 QFEHDNIVQYFGTEK  261 (264)
Q Consensus       247 ~l~HpNIV~l~g~~~  261 (264)
                      .++|||||++++++.
T Consensus        92 ~l~h~~iv~~~~~~~  106 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLD  106 (298)
T ss_dssp             TCCCTTBCCEEEEEE
T ss_pred             hCCCCCCCeEEEEEE
Confidence            999999999999853

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.79  E-value=1.3e-08  Score=88.43  Aligned_cols=67  Identities=31%  Similarity=0.439  Sum_probs=53.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .+|..||+|.+..     ........+.+|+.++..++||||+++++++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   77 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL-----TDPQSVKHALREIKIIRRLDHDNIVKVFEIL   77 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEEC-----CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEec-----CChHHHHHHHHHHHHHHhcCCCCeeEEEEec
Confidence            46799999999999999999999 6789999999975     2455667899999999999999999998864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.79  E-value=8.9e-09  Score=89.86  Aligned_cols=70  Identities=21%  Similarity=0.201  Sum_probs=60.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||++.+ .++..||||.+.....  ........+.+|+.++..++|||||++++++
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   81 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA--RDPSFYLRFRREAQNAAALNHPAIVAVYDTG   81 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT--TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc--CCHHHHHHHHHHHHHHHcCCCCCcceEEEee
Confidence            56899999999999999999998 7889999999986332  2445567889999999999999999999874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.79  E-value=9.3e-09  Score=89.41  Aligned_cols=67  Identities=22%  Similarity=0.397  Sum_probs=57.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+ .+|..||||.+....     ......+.+|+.++..++|||||++++++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   86 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-----QPKKELIINEILVMRENKNPNIVNYLDSY   86 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-----CSCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-----ccHHHHHHHHHHHHhcCCCCCCCeEeEEE
Confidence            45789999999999999999998 788999999998632     22245688999999999999999999974

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.79  E-value=9.5e-09  Score=92.28  Aligned_cols=69  Identities=23%  Similarity=0.364  Sum_probs=53.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+ .+|..||||.+....   ........+.+|+.+|..++|||||++++++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~   93 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF---QSELFAKRAYRELRLLKHMRHENVIGLLDVF   93 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT---SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEE
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc---cCHHHHHHHHHHHHHHHhCCCcCCCCceeeE
Confidence            56899999999999999999999 789999999996522   2445567889999999999999999999874

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.79  E-value=1.4e-08  Score=91.48  Aligned_cols=69  Identities=23%  Similarity=0.289  Sum_probs=60.0

Q ss_pred             cCCeeeccccccc--CceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSG--SFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G--~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|.+.+.||+|  +||.||+|.+ .+|..||||.+.....   .......+.+|+.+|+.++|||||++++++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   95 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC---SNEMVTFLQGELHVSKLFNHPNIVPYRATF   95 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc---ChHHHHHHHHHHHHHHhCCCCCCCcEeEEE
Confidence            4679999999999  9999999999 7899999999986432   345567788999999999999999999984

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.79  E-value=5.4e-09  Score=92.17  Aligned_cols=70  Identities=26%  Similarity=0.413  Sum_probs=55.9

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||+|.+ .+|..||||.+.....   .......+.+|+.+|..++|||||++++++
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  102 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE---EEGVPGTAIREVSLLKELQHRNIIELKSVI  102 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------CHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc---ccccchhHHHHHHHHHHcCCCCcceEEEEE
Confidence            367899999999999999999998 7889999999975321   233445678999999999999999999984

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.79  E-value=1.4e-08  Score=90.49  Aligned_cols=69  Identities=26%  Similarity=0.429  Sum_probs=58.4

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|...+.||+|+||.||+|.+ .+|..||||.+.....  ........+.+|+.+|..++|||||++++++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  123 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY  123 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc--cchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3488999999999999999998 7889999999986322  2344557789999999999999999999975

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.78  E-value=5.5e-09  Score=94.05  Aligned_cols=65  Identities=18%  Similarity=0.196  Sum_probs=53.9

Q ss_pred             cCCeeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+    .++..||+|.+...       .....+.+|+.+|..+ +|||||++++++
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-------~~~~~~~~E~~~l~~~~~h~nIv~l~~~~   89 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-------SHPIRIAAELQCLTVAGGQDNVMGVKYCF   89 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-------SCHHHHHHHHHHHHHTCSBTTBCCCSEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-------cCHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence            46799999999999999999986    24678999998752       1235688999999988 699999999873

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.78  E-value=1.6e-08  Score=86.33  Aligned_cols=69  Identities=26%  Similarity=0.401  Sum_probs=59.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   74 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM---TEAEKQMLVSEVNLLRELKHPNIVRYYDRI   74 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC---CHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            46799999999999999999999 7889999999986332   345567899999999999999999999864

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=98.78  E-value=9.6e-09  Score=89.89  Aligned_cols=68  Identities=28%  Similarity=0.392  Sum_probs=57.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|.+.+.||+|+||.||+|.+ .+|..||||.+....    .......+.+|+.+|..++|||||++++++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   76 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS----FLRPVDVQMREFEVLKKLNHKNIVKLFAIE   76 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG----GGSCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc----ccchHHHHHHHHHHHHhcCCCCcceEEEEe
Confidence            35689999999999999999999 778999999997522    123356778999999999999999999874

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.78  E-value=1.5e-08  Score=91.04  Aligned_cols=72  Identities=25%  Similarity=0.318  Sum_probs=59.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc-ChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ-GEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~-~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||+|.+........ .......+.+|+.+|..++|||||++++++
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~   84 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY   84 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE
Confidence            46799999999999999999999 7899999999986432111 112356789999999999999999999984

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.78  E-value=1.7e-08  Score=87.77  Aligned_cols=70  Identities=27%  Similarity=0.484  Sum_probs=58.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|.+.+.||+|+||.||+|.+ .+|..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~  101 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL--MDAKARADCIKEIDLLKQLNHPNVIKYYASF  101 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc--cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            46799999999999999999998 7889999999985322  2455667899999999999999999999884

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.78  E-value=1.3e-08  Score=93.28  Aligned_cols=69  Identities=20%  Similarity=0.325  Sum_probs=60.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||.+....   ........+.+|+.+|..++|||||++++++
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~   94 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF---EDLIDCKRILREITILNRLKSDYIIRLYDLI   94 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT---TSHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh---cChHHHHHHHHHHHHHHHcCCCCcceEEEEE
Confidence            57899999999999999999999 788999999997522   2445567899999999999999999999874

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=98.78  E-value=5.9e-09  Score=93.83  Aligned_cols=69  Identities=29%  Similarity=0.413  Sum_probs=58.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+ .++..||||.+...    ........+.+|+.+|..++|||||+++|+|.
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  182 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET----LPPDLKAKFLQEARILKQYSHPNIVRLIGVCT  182 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT----SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc----CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            45789999999999999999999 68899999998742    23444567889999999999999999999853

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.78  E-value=6e-09  Score=91.39  Aligned_cols=68  Identities=31%  Similarity=0.588  Sum_probs=44.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .+|..||+|.+....    .......+.+|+.+|..++|||||++++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   72 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS----EEGTPSTAIREISLMKELKHENIVRLYDVI   72 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCS----TTCSCHHHHHHHHHHTTCCBTTBCCEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc----ccccHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence            45789999999999999999998 788999999998632    122235688999999999999999999984

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.77  E-value=7.2e-09  Score=87.87  Aligned_cols=68  Identities=19%  Similarity=0.261  Sum_probs=58.6

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .|..||||.+....   ........+.+|+.++..++||||+++++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   76 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRD---WSTRKSRDFNEECPRLRIFSHPNVLPVLGAC   76 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTT---CCHHHHHHHHHHGGGGCCCSCTTEECEEEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccc---cCHHHHHHHHHHHHHHHhcCCCchhheEEEE
Confidence            46789999999999999999998 57899999998632   2445567899999999999999999999984

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.77  E-value=1.1e-08  Score=87.96  Aligned_cols=66  Identities=26%  Similarity=0.495  Sum_probs=58.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||.+..      .......+.+|+.++..++||||+++++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   71 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH------TEEKLSTILSEVMLLASLNHQYVVRYYAAW   71 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE------EHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec------cHHHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence            45789999999999999999998 7889999999974      345567899999999999999999999864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.77  E-value=1e-08  Score=87.34  Aligned_cols=66  Identities=23%  Similarity=0.261  Sum_probs=56.4

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+..+..||+|.+....      .....+.+|+.++..++||||+++++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~   74 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA------MSEEDFIEEAEVMMKLSHPKLVQLYGVC   74 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS------BCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc------cCHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            35789999999999999999998667789999998532      2235689999999999999999999984

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.77  E-value=1.7e-08  Score=89.27  Aligned_cols=68  Identities=26%  Similarity=0.437  Sum_probs=59.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||.+...    ........+.+|+.+|..++||||+++++++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   78 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF----DKPLFALRTLREIKILKHFKHENIITIFNIQ   78 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc----ccchHHHHHHHHHHHHHhCcCCCcCCeeeee
Confidence            57899999999999999999999 78899999999742    2445566788999999999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.76  E-value=8.7e-09  Score=90.53  Aligned_cols=66  Identities=30%  Similarity=0.399  Sum_probs=56.0

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..+|...+.||+|+||.||+|.+ .+..||||.+..      ..........|+.+|..++|||||++++++.
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   88 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPI------QDKQSWQNEYEVYSLPGMKHENILQFIGAEK   88 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECG------GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEE-CCCEEEEEEeec------CchHHHHHHHHHHHHhcCCCCCchhhcceec
Confidence            46799999999999999999988 578999999975      3334456677999999999999999999854

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.76  E-value=1.7e-08  Score=88.91  Aligned_cols=68  Identities=28%  Similarity=0.347  Sum_probs=57.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCC---CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDG---FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g---~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|.+.+.||+|+||.||+|.+ .+|   ..||||.+...    ........+.+|+.+|..++|||||++++++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  119 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG----YTERQRRDFLSEASIMGQFDHPNIIRLEGVV  119 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC----CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            35789999999999999999998 433   45999999752    2445567899999999999999999999984

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.76  E-value=6.4e-09  Score=92.54  Aligned_cols=70  Identities=27%  Similarity=0.324  Sum_probs=58.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||+|.+.....  ........+.+|+.+|..++|||||++++++
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~   78 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLL--KKSDMHMRVEREISYLKLLRHPHIIKLYDVI   78 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHc--cchhHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            57899999999999999999999 8899999999975211  0112235688999999999999999999984

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.76  E-value=1.3e-08  Score=91.53  Aligned_cols=69  Identities=29%  Similarity=0.442  Sum_probs=55.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||.+....   ........+.+|+.+|..++||||+++++++
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~   97 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKHENVIGLLDVF   97 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT---SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc---cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            57899999999999999999998 788999999997522   2445567889999999999999999999875

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.76  E-value=1.8e-08  Score=89.99  Aligned_cols=68  Identities=21%  Similarity=0.296  Sum_probs=58.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+ .++..||||.+...    ........+.+|+.+|..++||||+++++++
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   94 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF----EHQTYCQRTLREIKILLRFRHENIIGINDII   94 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT----TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc----cCcHHHHHHHHHHHHHHhcCCCCCccceeEE
Confidence            45799999999999999999998 78889999999742    2345567889999999999999999999875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.75  E-value=2e-08  Score=90.15  Aligned_cols=69  Identities=25%  Similarity=0.351  Sum_probs=60.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+ .+|..||||.+....   ........+.+|+.++..++||||+++++++
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~  110 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF---QSEIFAKRAYRELLLLKHMQHENVIGLLDVF  110 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT---SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc---cchhHHHHHHHHHHHHHhcCCCCchhhhhhe
Confidence            56899999999999999999998 788999999997532   2445567889999999999999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=98.75  E-value=1.6e-08  Score=88.04  Aligned_cols=67  Identities=24%  Similarity=0.296  Sum_probs=57.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+|..||||.+..     ........+.+|+.++..++||||+++++++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   95 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC-----HEQQDREEAQREADMHRLFNHPNILRLVAYC   95 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE-----SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec-----CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            45799999999999999999998 7889999999875     2445667899999999999999999999875

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.75  E-value=2.1e-08  Score=88.17  Aligned_cols=65  Identities=25%  Similarity=0.317  Sum_probs=55.4

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      |.....||+|+||.||+|.+ .+|..||||.+....     ......+.+|+.+|..++|||||++++++.
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  112 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-----QQRRELLFNEVVIMRDYQHFNVVEMYKSYL  112 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCSHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-----hhHHHHHHHHHHHHHhCCCCCcceEEEEEE
Confidence            67778999999999999998 689999999998532     233467889999999999999999998753

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=98.75  E-value=4.2e-09  Score=92.27  Aligned_cols=77  Identities=25%  Similarity=0.377  Sum_probs=62.0

Q ss_pred             CchHHHHHhcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          180 SLNEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+..++....++|...+.||+|+||.||+|.+.+|..||||.+.....    ......+.+|+.++..++||||++++++
T Consensus        20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT----QGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC---------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC----chHHHHHHHHHHHHHhccCCCccceEEE
Confidence            345567777899999999999999999999876788999999975322    1122358899999999999999999998


Q ss_pred             e
Q 024683          260 E  260 (264)
Q Consensus       260 ~  260 (264)
                      +
T Consensus        96 ~   96 (326)
T 3uim_A           96 C   96 (326)
T ss_dssp             E
T ss_pred             E
Confidence            5

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.75  E-value=8.4e-09  Score=88.44  Aligned_cols=66  Identities=23%  Similarity=0.280  Sum_probs=53.7

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+.++..||+|.+....      .....+.+|+.++..++||||+++++++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~   88 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS------MSEDEFIEEAKVMMNLSHEKLVQLYGVC   88 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS------BCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC------CCHHHHHHHHHHHhcCCCCCEeeEEEEE
Confidence            56799999999999999999988767789999998532      1235689999999999999999999984

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.75  E-value=1.2e-08  Score=94.10  Aligned_cols=67  Identities=24%  Similarity=0.304  Sum_probs=57.7

Q ss_pred             hcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|.+.+.||+|+||.||+|.+..+..||||.+....      .....+.+|+.+|..++|||||++++++
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~l~~~~  252 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS------MSVEAFLAEANVMKTLQHDKLVKLHAVV  252 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS------BCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC------ccHHHHHHHHHHHhhCCCCCEeeEEEEE
Confidence            356789999999999999999999667889999998522      2356899999999999999999999985

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.74  E-value=2.5e-08  Score=88.68  Aligned_cols=77  Identities=23%  Similarity=0.290  Sum_probs=62.5

Q ss_pred             HHHHhcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCC------cChHHHHHHHHHHHHHhcCCCCCceeee
Q 024683          184 KYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGT------QGEQSVLQLEQEISLLGQFEHDNIVQYF  257 (264)
Q Consensus       184 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~------~~~~~~~~~~~Ei~iL~~l~HpNIV~l~  257 (264)
                      .+....+.|...+.||+|+||.||+|.+..|..||||.+.......      ........+.+|+.+|..++||||++++
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   95 (362)
T 3pg1_A           16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLR   95 (362)
T ss_dssp             HHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred             HHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcccee
Confidence            4556678999999999999999999998668999999986532211      1223347899999999999999999999


Q ss_pred             eee
Q 024683          258 GTE  260 (264)
Q Consensus       258 g~~  260 (264)
                      +++
T Consensus        96 ~~~   98 (362)
T 3pg1_A           96 DIF   98 (362)
T ss_dssp             EEE
T ss_pred             eeE
Confidence            986

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.74  E-value=2.1e-08  Score=89.01  Aligned_cols=69  Identities=25%  Similarity=0.351  Sum_probs=59.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .+|..||||.+....   ........+.+|+.+|..++||||+++++++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   92 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF---QSEIFAKRAYRELLLLKHMQHENVIGLLDVF   92 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT---SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc---cchHHHHHHHHHHHHHHhcCCCCcccHhheE
Confidence            46799999999999999999999 788999999997532   2445567889999999999999999999874

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.74  E-value=1.2e-08  Score=90.48  Aligned_cols=70  Identities=27%  Similarity=0.301  Sum_probs=58.3

Q ss_pred             HhcCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      ...++|.+.+.||+|+||.||+|.+      .++..||||.+...    ........+.+|+.+|..+ +|||||+++++
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~   94 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRALMSELKILIHIGHHLNVVNLLGA   94 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc----CCHHHHHHHHHHHHHHHhhcCCcceeeeeee
Confidence            3457899999999999999999984      45678999999752    2345567899999999999 79999999998


Q ss_pred             e
Q 024683          260 E  260 (264)
Q Consensus       260 ~  260 (264)
                      +
T Consensus        95 ~   95 (359)
T 3vhe_A           95 C   95 (359)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.74  E-value=2.3e-08  Score=90.72  Aligned_cols=67  Identities=22%  Similarity=0.320  Sum_probs=58.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||+|.+...     .......+.+|+.+|..++|||||++++++
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~~~~~~  117 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-----YPLDKYTVKNEISIMNQLHHPKLINLHDAF  117 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----SHHHHHHHHHHHHHHTTCCSTTBCCEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc-----chhhHHHHHHHHHHHHhCCCcCCCeEEEEE
Confidence            46799999999999999999999 78899999999852     233456789999999999999999999984

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.74  E-value=1.2e-08  Score=94.32  Aligned_cols=69  Identities=22%  Similarity=0.266  Sum_probs=57.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .+|..+|+|.+.....   .......+.+|+.+|..++|||||++++++
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~   79 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKLEREARICRLLKHPNIVRLHDSI   79 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC---HHHHHHHHHHHHHHHHHCCBTTBCCEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCcCCCeEEEEE
Confidence            56799999999999999999998 7889999999986332   344567789999999999999999999974

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.74  E-value=8.3e-09  Score=91.59  Aligned_cols=72  Identities=24%  Similarity=0.363  Sum_probs=51.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+ .+|..||||.+...............+.+|+.++..++|||||++++++
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   81 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF   81 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE
Confidence            56799999999999999999999 7789999999975322111112234678999999999999999999884

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.74  E-value=1.5e-08  Score=86.17  Aligned_cols=66  Identities=26%  Similarity=0.276  Sum_probs=56.4

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+.++..||+|.+....      .....+.+|+.++..++||||+++++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~   72 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS------MSEDEFFQEAQTMMKLSHPKLVKFYGVC   72 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT------BCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC------CcHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            46789999999999999999988667789999998522      2235689999999999999999999984

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.74  E-value=8.7e-09  Score=93.44  Aligned_cols=70  Identities=21%  Similarity=0.277  Sum_probs=58.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||++.+ .+|..||+|.+.....  ........+.+|+.+|..++|||||++++++
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~   84 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC--VERNEVRNVFKELQIMQGLEHPFLVNLWYSF   84 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc--ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            46799999999999999999999 7889999999975221  1123356788999999999999999999884

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.74  E-value=2.7e-08  Score=87.62  Aligned_cols=72  Identities=24%  Similarity=0.358  Sum_probs=58.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCC-cChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGT-QGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~-~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .+|..||+|.+....... ........+.+|+.+|..++|||||++++++
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   83 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY   83 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            34689999999999999999999 788999999998643211 1112356789999999999999999999874

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.74  E-value=3.2e-08  Score=85.18  Aligned_cols=68  Identities=22%  Similarity=0.370  Sum_probs=58.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|.+...||+|+||.||+|.+ .++..||+|.+.....   .......+.+|+.+|..++|||||++++++
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   94 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSW   94 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh---CHHHHHHHHHHHHHHHhCCCCCeeeeeeee
Confidence            3478889999999999999999 7888999999985332   455567899999999999999999999874

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.74  E-value=2.5e-08  Score=89.80  Aligned_cols=70  Identities=24%  Similarity=0.370  Sum_probs=52.7

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      ...+|...+.||+|+||.||+|.+ .+|..||||.+....   ........+.+|+.+|..+. |||||++++++
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~---~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~   78 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF---QNSTDAQRTFREIMILTELSGHENIVNLLNVL   78 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC-----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc---cChHHHHHHHHHHHHHHhccCCCCCCeeeeEE
Confidence            367899999999999999999998 789999999996422   24555677889999999997 99999999985

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=98.73  E-value=9.4e-09  Score=96.07  Aligned_cols=67  Identities=27%  Similarity=0.417  Sum_probs=57.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..+|...+.||+|+||.||+|.+ .++..||||.+....      .....+.+|+.+|..++|||||+++++|.
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~  286 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCT  286 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS------SCHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc------cchHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            45789999999999999999999 668899999997522      23567999999999999999999999853

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=98.73  E-value=1.6e-08  Score=86.77  Aligned_cols=66  Identities=27%  Similarity=0.418  Sum_probs=58.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .++..||+|.+..      .......+.+|+.++..++||||+++++++
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   78 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------DTMEVEEFLKEAAVMKEIKHPNLVQLLGVC   78 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS------CSTHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            56789999999999999999999 6788999999975      233457789999999999999999999984

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.73  E-value=3.3e-08  Score=84.89  Aligned_cols=71  Identities=24%  Similarity=0.397  Sum_probs=58.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHH---HHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQS---VLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~---~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .++..||+|.+....... ....   ...+.+|+.++..++||||+++++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   92 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG-ETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM   92 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTC-CHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeecccccc-chhHHHHHHHHHHHHHHHHhCCCCCchhhheee
Confidence            46899999999999999999999 788999999997643211 1111   26789999999999999999999984

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=98.73  E-value=1.7e-08  Score=91.37  Aligned_cols=68  Identities=28%  Similarity=0.392  Sum_probs=57.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|.+.+.||+|+||.||+|.+ .+|..||||.+....    .......+.+|+.+|..++|||||++++++
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~   76 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS----FLRPVDVQMREFEVLKKLNHKNIVKLFAIE   76 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG----GGSCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc----ccchHHHHHHHHHHHHhcCCCCCCeEEEee
Confidence            35689999999999999999999 778999999997522    123356778999999999999999999874

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.72  E-value=1.9e-08  Score=90.21  Aligned_cols=68  Identities=32%  Similarity=0.446  Sum_probs=56.8

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+      .++..||||.+...    ........+.+|+.+|..++|||||++++++
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~  143 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV----CSEQDELDFLMEALIISKFNHQNIVRCIGVS  143 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc----cChhhHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            35789999999999999999994      35668999999742    2455566789999999999999999999985

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.72  E-value=3.1e-08  Score=88.26  Aligned_cols=70  Identities=16%  Similarity=0.170  Sum_probs=59.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+|..||+|++.....  ........+.+|+.+|..+ +|||||++++++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~   79 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV--NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF   79 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS--CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh--cchHHHHHHHHHHHHHHhcCCCCccCeEEEEE
Confidence            46799999999999999999999 7889999999986432  2345567789999999987 899999999984

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.72  E-value=3.1e-08  Score=85.44  Aligned_cols=71  Identities=24%  Similarity=0.291  Sum_probs=60.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ...|...+.||+|+||.||++.+ .++..||+|.+.....  ........+.+|+.++..++||||+++++++.
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   85 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGFHGFFE   85 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhc--cCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec
Confidence            45789999999999999999999 7788999999976332  23455677899999999999999999999853

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.72  E-value=2.9e-08  Score=89.30  Aligned_cols=66  Identities=29%  Similarity=0.451  Sum_probs=54.2

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ....+|...+.||+|+||.||+|.+ .+|..||||.+.....         ...+|+.+|+.++|||||++++++.
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---------~~~~E~~il~~l~hpnIv~l~~~~~   70 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---------YKNRELDIMKVLDHVNIIKLVDYFY   70 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---------SCCHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---------hHHHHHHHHHHcCCCCccchhheee
Confidence            3467899999999999999999998 8899999999975321         1237999999999999999999863

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.72  E-value=1.6e-08  Score=89.73  Aligned_cols=70  Identities=26%  Similarity=0.464  Sum_probs=58.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.+|..++|||||++++++.
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   86 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---KEGFPITALREIKILQLLKHENVVNLIEICR   86 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC---SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc---cccchHHHHHHHHHHHhccCCCcccHhheee
Confidence            46799999999999999999999 7899999999875432   2223456789999999999999999999754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.72  E-value=1.1e-08  Score=90.67  Aligned_cols=72  Identities=28%  Similarity=0.299  Sum_probs=48.8

Q ss_pred             HHHHHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          183 EKYRRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       183 ~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .......++|.+.+.||+|+||.||+|.+ .+|..||||.+....      ........++..+..++|||||++++++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~~l~~l~h~niv~~~~~~   88 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP------RFRNRELQIMQDLAVLHHPNIVQLQSYF   88 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT------TCCCHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc------cccHHHHHHHHHHHhcCCCCcccHHHhh
Confidence            34455678999999999999999999999 788999999987532      1223456788888889999999999886

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.72  E-value=3.9e-08  Score=85.22  Aligned_cols=78  Identities=24%  Similarity=0.459  Sum_probs=61.5

Q ss_pred             chHHHHHhcCCeeec------ccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCce
Q 024683          181 LNEKYRRRIMSWQKG------APLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV  254 (264)
Q Consensus       181 ~~~~~~~~~~~~~~~------~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV  254 (264)
                      ....+...+.+|...      +.||+|+||.||+|.+ .+..||||.+..... .........+.+|+.++..++||||+
T Consensus        16 ~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~   93 (307)
T 2nru_A           16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVD-ITTEELKQQFDQEIKVMAKCQHENLV   93 (307)
T ss_dssp             CHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTT-SCTTTHHHHHHHHHHHHHHCCCTTBC
T ss_pred             cHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccC-cchHHHHHHHHHHHHHHHhcCCCCeE
Confidence            444566667766665      8999999999999987 678999999975321 12334567899999999999999999


Q ss_pred             eeeeee
Q 024683          255 QYFGTE  260 (264)
Q Consensus       255 ~l~g~~  260 (264)
                      ++++++
T Consensus        94 ~~~~~~   99 (307)
T 2nru_A           94 ELLGFS   99 (307)
T ss_dssp             CEEEEE
T ss_pred             EEEEEE
Confidence            999985

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.72  E-value=1.3e-08  Score=90.49  Aligned_cols=70  Identities=19%  Similarity=0.177  Sum_probs=58.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+|..||+|.+.....  ........+.+|+.+|..++||||+++++++
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~   74 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTALKYAF   74 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh--hhhhHHHHHHHHHHHHHhCCCCcCcceEEEE
Confidence            46799999999999999999999 7899999999975211  0122356788999999999999999999874

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.71  E-value=2.3e-08  Score=86.37  Aligned_cols=67  Identities=28%  Similarity=0.494  Sum_probs=56.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||+|.+...     .......+.+|+.++..++||||+++++++
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   85 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-----SEEELEDYIVEIEILATCDHPYIVKLLGAY   85 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC---------CCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC-----CHHHHHHHHHHHHHHhcCCCCCEeeeeeee
Confidence            46799999999999999999999 67899999998752     233456789999999999999999999974

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.71  E-value=2e-08  Score=86.73  Aligned_cols=69  Identities=30%  Similarity=0.462  Sum_probs=55.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   71 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE---TEGVPSTAIREISLLKELNHPNIVKLLDVI   71 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC-----------CCHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc---chhhHHHHHHHHHHHHHcCCCCeeeEEEEE
Confidence            46899999999999999999999 6889999999875321   222346788999999999999999999984

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.71  E-value=3e-08  Score=89.29  Aligned_cols=64  Identities=28%  Similarity=0.478  Sum_probs=49.9

Q ss_pred             eecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ...+.||+|+||.||+|.+ .+|..||+|++...     .......+.+|+.+|..++|||||++++++.
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~  156 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR-----GMKDKEEVKNEISVMNQLDHANLIQLYDAFE  156 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECC-----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc-----ccccHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            3467899999999999998 78899999999852     3345678999999999999999999999853

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.71  E-value=1.3e-08  Score=88.45  Aligned_cols=73  Identities=27%  Similarity=0.515  Sum_probs=55.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC---CCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE---HDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~---HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+...............+.+|+.++..+.   |||||++++++.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~   84 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA   84 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence            57899999999999999999998 78899999999854321112222345677888777664   999999999853

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.71  E-value=1.4e-08  Score=86.96  Aligned_cols=71  Identities=27%  Similarity=0.492  Sum_probs=58.4

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||+|.+ .++..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   78 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPNILRLYGYF   78 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecccc--chhhHHHHHHHHHHHHHcCCCCCCcchhheE
Confidence            357899999999999999999999 7788999999975211  1122346688999999999999999999984

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.71  E-value=2.5e-08  Score=92.55  Aligned_cols=70  Identities=29%  Similarity=0.308  Sum_probs=59.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .+|..||||++......  .......+.+|+.+|..++|||||++++++
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   95 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK--QKTDKESLLREVQLLKQLDHPNIMKLYEFF   95 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--BSSCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc--cchHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            35689999999999999999999 78999999999764321  233456789999999999999999999984

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.71  E-value=2.4e-08  Score=88.16  Aligned_cols=70  Identities=24%  Similarity=0.290  Sum_probs=59.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||++.+ .++..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  110 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGFHGFF  110 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh--cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            46799999999999999999999 7788999999986332  2345567789999999999999999999984

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.71  E-value=2.9e-08  Score=85.50  Aligned_cols=69  Identities=26%  Similarity=0.342  Sum_probs=58.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+.|...+.||+|+||.||++.+ .++..||+|.+.....    ......+.+|+.+|..++||||+++++++.
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   90 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS----QVPMEQIEAEIEVLKSLDHPNIIKIFEVFE   90 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc----chhHHHHHHHHHHHHhCCCchHHhHHHhee
Confidence            45689999999999999999999 7889999999986432    223567899999999999999999999853

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.70  E-value=2.1e-08  Score=87.53  Aligned_cols=64  Identities=23%  Similarity=0.316  Sum_probs=55.3

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+..||+|.+..       ......+.+|+.+|..++|||||++++++
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~-------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   70 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIES-------ESERKAFIVELRQLSRVNHPNIVKLYGAC   70 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSS-------TTHHHHHHHHHHHHHHCCCTTBCCEEEBC
T ss_pred             HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecC-------hhHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence            35789999999999999999998 578899999863       23456789999999999999999999874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.70  E-value=2.2e-08  Score=85.58  Aligned_cols=66  Identities=24%  Similarity=0.366  Sum_probs=56.3

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+..+..||+|.+....      .....+.+|+.+|..++||||+++++++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~   77 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS------MSPDAFLAEANLMKQLQHQRLVRLYAVV   77 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS------SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc------ccHHHHHHHHHHHHhCCCcCcceEEEEE
Confidence            45789999999999999999998666789999997522      2246789999999999999999999874

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.70  E-value=1.8e-08  Score=90.51  Aligned_cols=69  Identities=26%  Similarity=0.413  Sum_probs=57.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-c-------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D-------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~-------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .++|.+.+.||+|+||.||+|.+ .       .+..||||.+...    ........+.+|+.+|..+ +|||||+++++
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  155 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGA  155 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT----CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEE
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC----cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            46799999999999999999986 1       3457999999752    2455667899999999999 89999999998


Q ss_pred             ee
Q 024683          260 EK  261 (264)
Q Consensus       260 ~~  261 (264)
                      |.
T Consensus       156 ~~  157 (370)
T 2psq_A          156 CT  157 (370)
T ss_dssp             EC
T ss_pred             Ec
Confidence            53

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.70  E-value=1.6e-08  Score=93.94  Aligned_cols=69  Identities=25%  Similarity=0.341  Sum_probs=58.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||||++.....   .......+.+|+.+|..++|||||++++++
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   90 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA---KNKDTSTILREVELLKKLDHPNIMKLFEIL   90 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH---BCSCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHHHhCCCCCcCeEEEEE
Confidence            46799999999999999999999 7889999999975321   122356789999999999999999999984

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.70  E-value=3.2e-08  Score=92.46  Aligned_cols=72  Identities=28%  Similarity=0.270  Sum_probs=55.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc--------ChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ--------GEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~--------~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+.|...+.||+|+||.||+|.+ .++..||+|.+........        .......+.+|+.+|..++|||||+++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            56899999999999999999999 7889999999986432100        01335678999999999999999999998


Q ss_pred             e
Q 024683          260 E  260 (264)
Q Consensus       260 ~  260 (264)
                      +
T Consensus       115 ~  115 (504)
T 3q5i_A          115 F  115 (504)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.69  E-value=2.9e-08  Score=88.25  Aligned_cols=68  Identities=24%  Similarity=0.320  Sum_probs=59.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+|..||+|.+...    ........+.+|+.+|..++||||+++++++
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  100 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGFYGAF  100 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC----CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc----cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEE
Confidence            35799999999999999999999 78899999999862    2455567899999999999999999999974

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.69  E-value=3.4e-08  Score=84.38  Aligned_cols=68  Identities=22%  Similarity=0.319  Sum_probs=57.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+.|...+.||+|+||.||+|.+ .++..||+|.+....     ......+.+|+.++..++||||+++++++.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   76 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-----VEDVDRFKQEIEIMKSLDHPNIIRLYETFE   76 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-----cchHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            45689999999999999999999 778899999998632     223567899999999999999999999843

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.69  E-value=2.3e-08  Score=93.17  Aligned_cols=69  Identities=23%  Similarity=0.272  Sum_probs=53.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .++..||+|++.....   .......+.+|+.+|..++|||||++++++
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  105 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV---STSSNSKLLEEVAVLKLLDHPNIMKLYDFF  105 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC--------CTTHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc---CchHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            34689999999999999999999 7889999999986432   122346788999999999999999999984

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.69  E-value=3.1e-08  Score=90.50  Aligned_cols=73  Identities=22%  Similarity=0.257  Sum_probs=57.6

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc---ChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~---~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+.|...+.||+|+||.||+|.+ .++..||||.+........   .......+.+|+.+|..++|||||++++++
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~  209 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF  209 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            367899999999999999999999 7889999999986432110   112223578999999999999999999873

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.69  E-value=1.6e-08  Score=89.05  Aligned_cols=69  Identities=23%  Similarity=0.402  Sum_probs=50.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCe----EEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFF----FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~----vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..+|...+.||+|+||.||+|.+ .+|..    ||+|.+...    ........+.+|+.+|..++|||||+++++|.
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   87 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----TSPKANKEILDEAYVMASVDNPHVCRLLGICL   87 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-----------CHHHHHHHHHHHHHCCBTTBCCEEEEEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc----cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe
Confidence            35689999999999999999998 55554    577777542    13344578999999999999999999999853

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.68  E-value=1.9e-08  Score=87.30  Aligned_cols=68  Identities=24%  Similarity=0.347  Sum_probs=57.3

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+      .++..||+|.+...    ........+.+|+.+|..++|||||++++++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   95 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN----ASPSELRDLLSEFNVLKQVNHPHVIKLYGAC   95 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC----CCHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence            46789999999999999999986      23478999999752    2455667899999999999999999999974

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.68  E-value=1.7e-08  Score=89.03  Aligned_cols=70  Identities=26%  Similarity=0.327  Sum_probs=58.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.. .+|..||+|++.....  ........+.+|+.+|..++|||||++++++
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~   75 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV--VRLKQVEHTNDERLMLSIVTHPFIIRMWGTF   75 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhhCCCCCCceEeEEE
Confidence            46799999999999999999999 7899999999985221  0112346788999999999999999999884

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=98.68  E-value=3e-08  Score=85.16  Aligned_cols=67  Identities=16%  Similarity=0.292  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCC-------CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDG-------FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g-------~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .++       ..||+|.+...     .......+.+|+.+|..++|||||++++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   81 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA-----HRNYSESFFEAASMMSKLSHKHLVLNYGVC   81 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG-----GGGGHHHHHHHHHHHHTSCCTTBCCEEEEE
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc-----cHHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            45789999999999999999998 444       46999999752     344557899999999999999999999985

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.68  E-value=2.1e-08  Score=87.68  Aligned_cols=67  Identities=25%  Similarity=0.387  Sum_probs=58.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      ..+|.+.+.||+|+||.||+|.+ .+|..||+|.+..     ........+.+|+.++..+. |||||++++++
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~   95 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS-----NEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA   95 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEE-----SSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecC-----CchHHHHHHHHHHHHHHHhccCCChhhccccc
Confidence            34789999999999999999998 7889999999865     24455677899999999996 99999999886

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.68  E-value=2.1e-08  Score=92.50  Aligned_cols=66  Identities=24%  Similarity=0.339  Sum_probs=56.2

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+..+..||||.+....      .....+.+|+.+|..++|||||++++++
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~  248 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT------MSPEAFLQEAQVMKKLRHEKLVQLYAVV  248 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS------SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC------CCHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            45789999999999999999999556779999998532      1245789999999999999999999985

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.68  E-value=3.1e-08  Score=83.95  Aligned_cols=66  Identities=23%  Similarity=0.261  Sum_probs=56.4

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+..+..||+|.+....      .....+.+|+.++..++||||+++++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~   72 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA------MSEEDFIEEAEVMMKLSHPKLVQLYGVC   72 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT------BCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC------CCHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            35789999999999999999998667789999998532      1235789999999999999999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.68  E-value=3.8e-08  Score=83.95  Aligned_cols=69  Identities=25%  Similarity=0.429  Sum_probs=58.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .++..||+|.+.....   .......+.+|+.++..+ +||||+++++++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~   80 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA---GSVDEQNALREVYAHAVLGQHSHVVRYFSAW   80 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT---TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc---ccHHHHHHHHHHHHHHHhCCCCCeeeeeeee
Confidence            45789999999999999999999 6899999999986322   334557788999999999 899999999984

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.67  E-value=5.8e-08  Score=83.03  Aligned_cols=71  Identities=24%  Similarity=0.342  Sum_probs=58.4

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCC-cChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGT-QGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~-~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||++.+ .+|..||+|.+....... ........+.+|+.+|..++||||+++++++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   77 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF   77 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee
Confidence            4689999999999999999999 678999999998643221 1112356789999999999999999999974

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.67  E-value=2e-08  Score=93.66  Aligned_cols=70  Identities=30%  Similarity=0.393  Sum_probs=58.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||.+.....  ........+.+|+.+|+.++|||||++++++
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~   85 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI--RSLDVVGKIRREIQNLKLFRHPHIIKLYQVI   85 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH--HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            56899999999999999999999 7899999999975221  0112346789999999999999999999984

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.67  E-value=5e-08  Score=85.08  Aligned_cols=71  Identities=17%  Similarity=0.214  Sum_probs=59.3

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||+|.+ .++..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~  103 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS--SDPVFRTRMQREARTAGRLQEPHVVPIHDFG  103 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG--GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc--cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence            367899999999999999999998 6789999999975321  2344457899999999999999999999984

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=98.67  E-value=2e-08  Score=90.40  Aligned_cols=68  Identities=26%  Similarity=0.414  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEec----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTD----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+.    .+..||||.+...    ........+.+|+.+|..++|||||++++++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~  115 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG----YTEKQRRDFLGEASIMGQFDHPNIIRLEGVV  115 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc----cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            357889999999999999999872    4668999999752    2345567899999999999999999999985

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=98.67  E-value=5.3e-08  Score=85.45  Aligned_cols=71  Identities=28%  Similarity=0.400  Sum_probs=58.4

Q ss_pred             HHhcCCeeecccccccCceeEEEEEe-cCC-----CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeee
Q 024683          186 RRRIMSWQKGAPLGSGSFGSVYEGFT-DDG-----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFG  258 (264)
Q Consensus       186 ~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g-----~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g  258 (264)
                      ....++|...+.||+|+||.||+|.+ .++     ..||+|.+...    ........+.+|+.+|..+ +|||||++++
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  117 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST----AHADEKEALMSELKIMSHLGQHENIVNLLG  117 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc----cChHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            33457899999999999999999998 433     37999999752    2345567899999999999 8999999999


Q ss_pred             ee
Q 024683          259 TE  260 (264)
Q Consensus       259 ~~  260 (264)
                      ++
T Consensus       118 ~~  119 (333)
T 2i1m_A          118 AC  119 (333)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.67  E-value=5.2e-08  Score=84.39  Aligned_cols=68  Identities=28%  Similarity=0.550  Sum_probs=58.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .++..||+|.+....    .......+.+|+.++..++||||+++++++
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   89 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSPYVTKYYGSY   89 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT----CSTTHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc----cHHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence            35689999999999999999998 788999999998632    233457789999999999999999999974

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.67  E-value=3.6e-08  Score=83.82  Aligned_cols=70  Identities=27%  Similarity=0.357  Sum_probs=54.4

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .|..||||.+...... ........+.+|+.++..++||||+++++++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   75 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDE-DISQTIENVRQEAKLFAMLKHPNIIALRGVC   75 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcc-cHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            46899999999999999999998 5789999998753221 1233356789999999999999999999984

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.67  E-value=2.5e-08  Score=91.94  Aligned_cols=64  Identities=28%  Similarity=0.370  Sum_probs=55.8

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .|..||||.+....       ....+.+|+.+|..++|||||+++++|
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~  255 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVI  255 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT-------TSHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch-------HHHHHHHHHHHHHhccCCCEEEEEEEE
Confidence            46789999999999999999998 57799999997521       346789999999999999999999985

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.67  E-value=4.9e-08  Score=86.45  Aligned_cols=69  Identities=22%  Similarity=0.406  Sum_probs=59.1

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCC--CCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH--DNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~H--pNIV~l~g~~  260 (264)
                      ...|.+.+.||+|+||.||++.+.++..||||.+....   ........+.+|+.+|..++|  |||+++++++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   78 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   78 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc---cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE
Confidence            45699999999999999999998678899999998643   245566789999999999986  9999999984

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.67  E-value=2.3e-08  Score=85.46  Aligned_cols=70  Identities=24%  Similarity=0.420  Sum_probs=57.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   80 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM--YKAGMVQRVQNEVKIHCQLKHPSILELYNYF   80 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhh--hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE
Confidence            46799999999999999999998 7889999999975211  0112346789999999999999999999884

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.66  E-value=2.8e-08  Score=86.86  Aligned_cols=69  Identities=23%  Similarity=0.352  Sum_probs=51.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCC---eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGF---FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~---~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .++.   .||||.+.....   .......+.+|+.++..++||||+++++++
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII---ASSDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC---------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc---CHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            46799999999999999999998 4433   799999975321   334567899999999999999999999974

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.66  E-value=6.1e-08  Score=82.49  Aligned_cols=69  Identities=23%  Similarity=0.463  Sum_probs=58.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+....    .......+.+|+.++..++||||+++++++.
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   75 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----AVDCPENIKKEICINKMLNHENVVKFYGHRR   75 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG----CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc----chhhhHHHHHHHHHHHhcCCCCceeeeeEEE
Confidence            46789999999999999999999 688999999997532    2234567899999999999999999999843

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.66  E-value=3.2e-08  Score=85.86  Aligned_cols=68  Identities=29%  Similarity=0.368  Sum_probs=57.4

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+      .++..||+|.+...    ........+.+|+.+|..+ +||||+++++++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   96 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS----AHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc----hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE
Confidence            46799999999999999999984      35678999999852    2344567899999999999 899999999985

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=98.66  E-value=3e-08  Score=93.59  Aligned_cols=66  Identities=24%  Similarity=0.339  Sum_probs=56.2

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+..+..||||.+....      .....+.+|+.+|..++|||||++++++
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~  331 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT------MSPEAFLQEAQVMKKLRHEKLVQLYAVV  331 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS------SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC------CCHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            45788999999999999999999556789999998522      2245789999999999999999999985

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.66  E-value=5.5e-08  Score=84.36  Aligned_cols=67  Identities=28%  Similarity=0.309  Sum_probs=55.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||++.+ .+|..||+|.+....     ......+.+|+.++..++||||+++++++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   75 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-----AFRDSSLENEIAVLKKIKHENIVTLEDIY   75 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------HHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc-----ccchHHHHHHHHHHHhCCCCCeeehhhhc
Confidence            35689999999999999999999 788999999998522     22335688999999999999999999874

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.66  E-value=5e-08  Score=83.88  Aligned_cols=70  Identities=24%  Similarity=0.320  Sum_probs=59.4

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|.+.+.||+|+||.||+|.+ .++..||+|.+.....   .......+.+|+.++..++||||+++++++
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   90 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA---KNKDTSTILREVELLKKLDHPNIMKLFEIL   90 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB---SSSCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHHHHHHHhccCCCccEEEEEE
Confidence            356799999999999999999999 6889999999976332   223456789999999999999999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.66  E-value=3.9e-08  Score=86.51  Aligned_cols=69  Identities=22%  Similarity=0.352  Sum_probs=57.9

Q ss_pred             hcCCeeecccccccCceeEEEEEec------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFTD------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||+|.+.      ++..||||.+...    ........+.+|+.+|..++||||+++++++
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE----ASADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc----cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            3568999999999999999999982      2378999999752    2345567899999999999999999999985

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.66  E-value=5.1e-08  Score=83.81  Aligned_cols=66  Identities=32%  Similarity=0.519  Sum_probs=53.7

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .|.....||+|+||.||+|.+ .++..||+|.+...     .......+.+|+.++..++|||||++++++.
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   89 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-----DSRYSQPLHEEIALHKHLKHKNIVQYLGSFS   89 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC-----CC---HHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC-----chHHHHHHHHHHHHHHhCCCCCEeeEeeEEE
Confidence            345556899999999999998 78899999999852     2334567899999999999999999999853

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.66  E-value=2.6e-08  Score=87.86  Aligned_cols=69  Identities=23%  Similarity=0.402  Sum_probs=55.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeE----EEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFF----AVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~v----AvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..+|...+.||+|+||.||+|.+ .++..+    |+|.+...    ........+.+|+.+|..++||||++++++|.
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   87 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----TSPKANKEILDEAYVMASVDNPHVCRLLGICL   87 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC----SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc----cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEe
Confidence            46799999999999999999998 566554    66666532    13344578899999999999999999999853

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.65  E-value=8.8e-09  Score=94.21  Aligned_cols=72  Identities=17%  Similarity=0.131  Sum_probs=57.7

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...++|...+.||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.+|..++|||||++++++
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~--~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~  138 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFYAF  138 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhh--hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            3457899999999999999999999 7889999999975211  0111123478999999999999999999884

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.65  E-value=8.8e-09  Score=90.58  Aligned_cols=67  Identities=30%  Similarity=0.454  Sum_probs=53.9

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||+|.+ .++..||+|.+.....    ......+.+|+.+|..++|||||++++++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   69 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE----EGAPCTAIREVSLLKDLKHANIVTLHDII   69 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC----------CCCCCCCHHHHSCCCCTTBCCEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc----cccchhHHHHHHHHHhcCCCCCCeeeeEE
Confidence            5799999999999999999999 7889999999975321    11112355799999999999999999984

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.65  E-value=2.4e-08  Score=89.24  Aligned_cols=70  Identities=20%  Similarity=0.206  Sum_probs=58.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .+|..||+|.+.....  ........+.+|+.+|..++|||||++++++
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  110 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAVNFPFLVKLEFSF  110 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh--ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            46799999999999999999999 7899999999975321  1123356788999999999999999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.65  E-value=7e-08  Score=84.48  Aligned_cols=72  Identities=25%  Similarity=0.335  Sum_probs=58.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCC-cChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGT-QGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~-~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||+|.+....... ........+.+|+.+|..++||||+++++++
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   84 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY   84 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            45689999999999999999999 788999999998643211 1112356789999999999999999999884

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.65  E-value=7.1e-08  Score=84.44  Aligned_cols=66  Identities=32%  Similarity=0.421  Sum_probs=55.7

Q ss_pred             eeecccccccCceeEEEEEe-----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      |...+.||+|+||.||++.+     .+|..||||.+...    ........+.+|+.+|..++||||+++++++.
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  103 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD----AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCE  103 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc----cChHHHHHHHHHHHHHHhCCCcchhhEEEEEe
Confidence            58999999999999998865     36788999999852    24556678999999999999999999999854

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.65  E-value=2.3e-08  Score=86.51  Aligned_cols=71  Identities=27%  Similarity=0.341  Sum_probs=58.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||++.+ .++..||+|.+...... ........+.+|+.++..++||||+++++++
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   75 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR-RIPNGEANVKKEIQLLRRLRHKNVIQLVDVL   75 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHH-HSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccc-ccchhHHHHHHHHHHHHhcCCCCeeEEEEEE
Confidence            46899999999999999999999 78899999999752210 0123456789999999999999999999975

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.65  E-value=3.8e-08  Score=86.17  Aligned_cols=72  Identities=24%  Similarity=0.284  Sum_probs=54.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCC---cChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGT---QGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .++..||||.+.......   ........+.+|+.+|..++||||+++++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   84 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF   84 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEE
Confidence            45789999999999999999999 778999999997532210   0112234588999999999999999999874

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.65  E-value=4.5e-08  Score=86.98  Aligned_cols=67  Identities=25%  Similarity=0.343  Sum_probs=58.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-----CCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-----HDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-----HpNIV~l~g~~~  261 (264)
                      .+.|...+.||+|+||.||+|.+ .++..||||.+..      .......+..|+.++..+.     |||||++++++.
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~  106 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN------IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM  106 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS------CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred             cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc------chhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence            57899999999999999999999 7889999999974      3455567888999999986     999999999743

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.65  E-value=4e-08  Score=86.60  Aligned_cols=71  Identities=20%  Similarity=0.257  Sum_probs=51.5

Q ss_pred             cCCeeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++..    .+|..||+|++...... ........+.+|+.+|..++|||||++++++
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   90 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV-RNAKDTAHTKAERNILEEVKHPFIVDLIYAF   90 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------HHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHHhCCCCCccceeEEE
Confidence            46799999999999999999987    47889999999863221 1223345678999999999999999999884

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.64  E-value=6.4e-08  Score=83.30  Aligned_cols=66  Identities=27%  Similarity=0.350  Sum_probs=54.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCC---eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGF---FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~---~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||+|.+ .++.   .||+|.+...    ........+.+|+.++..++|||||++++++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   91 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI----TEMQQVEAFLREGLLMRGLNHPNVLALIGIM   91 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC----CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc----ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            467789999999999999987 3333   7999998742    2445667899999999999999999999985

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.64  E-value=4.2e-08  Score=84.71  Aligned_cols=67  Identities=31%  Similarity=0.432  Sum_probs=54.6

Q ss_pred             CCeeecccccccCceeEEEEEe-----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|...+.||+|+||.||+|.+     .++..||+|.+....    .......+.+|+.+|..++||||+++++++
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   92 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES----GGNHIADLKKEIEILRNLYHENIVKYKGIC   92 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------CCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc----cchhHHHHHHHHHHHHhCCCCCeeeeeeEE
Confidence            4589999999999999999983     578899999998532    233456789999999999999999999874

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.64  E-value=3.4e-08  Score=88.37  Aligned_cols=71  Identities=25%  Similarity=0.246  Sum_probs=57.5

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||+|.+ .+|..||||++.....  ........+..|..+|..+ +|||||++++++
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~--~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~   93 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI--LQDDDVECTMTEKRILSLARNHPFLTQLFCCF   93 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh--cchhHHHHHHHHHHHHHhccCCCceeeEEEEE
Confidence            367899999999999999999999 7889999999985211  1223456688999999988 699999999884

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.64  E-value=5.6e-08  Score=83.33  Aligned_cols=68  Identities=25%  Similarity=0.361  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-c---CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~---~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .   .+..||+|.+...    ........+.+|+.++..++||||+++++++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   85 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----TSDSVREKFLQEALTMRQFDHPHIVKLIGVI   85 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT----TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCccceEEEEE
Confidence            45789999999999999999988 2   2456999998742    2445567899999999999999999999874

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.64  E-value=5.8e-08  Score=85.18  Aligned_cols=66  Identities=30%  Similarity=0.428  Sum_probs=57.1

Q ss_pred             CCeeecccccccCceeEEEEEe-----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||+|.+     .++..||||.+..     ........+.+|+.+|..++||||+++++++
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   93 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH-----SGPDQQRDFQREIQILKALHSDFIVKYRGVS   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESS-----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEecc-----CCHHHHHHHHHHHHHHHhcCCCceeEEEEEE
Confidence            5789999999999999999983     5678999999975     2445567799999999999999999999875

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.64  E-value=3.9e-08  Score=83.81  Aligned_cols=70  Identities=30%  Similarity=0.392  Sum_probs=58.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   80 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI--RSLDVVGKIKREIQNLKLFRHPHIIKLYQVI   80 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccc--cchhHHHHHHHHHHHHhcCCCCCEeEEEEEE
Confidence            56899999999999999999999 6889999999975211  0122346788999999999999999999874

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.64  E-value=4.7e-08  Score=84.98  Aligned_cols=65  Identities=29%  Similarity=0.589  Sum_probs=51.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .+|..||+|.+....       ....+.+|+.++..++||||+++++++
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~   93 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-------DLQEIIKEISIMQQCDSPHVVKYYGSY   93 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-------CCHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-------HHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence            56799999999999999999999 778999999998522       235688999999999999999999974

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.63  E-value=4.3e-08  Score=85.92  Aligned_cols=68  Identities=24%  Similarity=0.366  Sum_probs=55.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHH-HHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEIS-LLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~-iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||.+....    .......+..|+. ++..++||||+++++++
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~   90 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV----DEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL   90 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC----CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc----CchHHHHHHHHHHHHHHcCCCCcEeeeeeEE
Confidence            57899999999999999999999 788999999998532    3344456667776 77788999999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.63  E-value=7e-08  Score=88.19  Aligned_cols=62  Identities=29%  Similarity=0.460  Sum_probs=53.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|...+.||+|+||.||+|.+ .+|..||||.+.....         ...+|+.+|..++|||||++++++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---------~~~~E~~il~~l~hpniv~l~~~~  116 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---------FKNRELQIMRKLDHCNIVRLRYFF  116 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---------hHHHHHHHHHHcCCCCccceeeEE
Confidence            4689999999999999999999 7899999999975221         124799999999999999998875

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.63  E-value=3.3e-08  Score=84.82  Aligned_cols=70  Identities=30%  Similarity=0.498  Sum_probs=57.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .++..||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   83 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSHLRHPNILRMYNYF   83 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEccccc--chHHHHHHHHHHHHHHhcCCCCCEeeEEEEE
Confidence            46799999999999999999999 6788999999975211  0112246788999999999999999999984

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=98.63  E-value=6.6e-08  Score=84.85  Aligned_cols=67  Identities=34%  Similarity=0.448  Sum_probs=57.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+     .+|..||+|.+..     ........+.+|+.+|..++||||+++++++
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  111 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-----STEEHLRDFEREIEILKSLQHDNIVKYKGVC  111 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS-----CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEecc-----CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            35689999999999999999983     4688999999975     2345567899999999999999999999874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.62  E-value=6e-08  Score=85.07  Aligned_cols=68  Identities=32%  Similarity=0.446  Sum_probs=54.4

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+      .++..||||.+...    ........+.+|+.++..++||||+++++++
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  102 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV----CSEQDELDFLMEALIISKFNHQNIVRCIGVS  102 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc----cchhhHHHHHHHHHHHhhCCCCCCCeEEEEE
Confidence            46789999999999999999984      45778999999742    2445567889999999999999999999984

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.62  E-value=5.1e-08  Score=84.80  Aligned_cols=69  Identities=28%  Similarity=0.447  Sum_probs=54.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-c---CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~---~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .   ++..||+|.+....   ........+.+|+.++..++||||+++++++
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN---SSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C---CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc---cchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            46789999999999999999987 3   34589999997532   2445567899999999999999999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.62  E-value=7.9e-08  Score=86.98  Aligned_cols=68  Identities=22%  Similarity=0.427  Sum_probs=57.8

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC--CCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE--HDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~--HpNIV~l~g~~  260 (264)
                      ..|.+.+.||+|+||.||++.+..+..||||.+....   ........+.+|+.+|..+.  |||||++++++
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~  125 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE  125 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc---ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEE
Confidence            4599999999999999999998558899999998633   24556678999999999996  59999999874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.62  E-value=3.7e-08  Score=89.68  Aligned_cols=70  Identities=14%  Similarity=0.168  Sum_probs=56.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||++.+ .++..||+|++.....  ........+..|..+|..+ +|||||++++++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~--~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~  122 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELV--NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF  122 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGT--C----CCHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc--cCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE
Confidence            56799999999999999999999 7888999999986432  1233345678999999876 899999999974

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.61  E-value=9.8e-08  Score=82.06  Aligned_cols=67  Identities=22%  Similarity=0.335  Sum_probs=55.3

Q ss_pred             CCeeecc-cccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGA-PLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~-~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|.... .||+|+||.||+|.+   ..+..||+|.+...    ........+.+|+.++..++||||+++++++
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   79 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----TEKADTEEMMREAQIMHQLDNPYIVRLIGVC   79 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc----cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe
Confidence            4566665 999999999999986   36778999999852    2445667899999999999999999999985

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.61  E-value=1.6e-08  Score=93.20  Aligned_cols=72  Identities=15%  Similarity=0.081  Sum_probs=57.7

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...++|...+.||+|+||.||+|.+ .++..||+|++.....  ........+..|+.+|..++|||||++++++
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM--LKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH--HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHh--hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            3467899999999999999999999 7788999999975211  0111123478999999999999999999874

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.61  E-value=1.3e-07  Score=81.54  Aligned_cols=73  Identities=21%  Similarity=0.211  Sum_probs=59.3

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcC----hHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQG----EQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~----~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||+|.+ .+|..||||.+.........    ......+.+|+.+|..+. ||||+++++++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            367899999999999999999999 78899999999864321111    233466889999999995 99999999984

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.60  E-value=6e-08  Score=84.79  Aligned_cols=67  Identities=27%  Similarity=0.529  Sum_probs=57.7

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ..+.|...+.||+|+||.||+|.+ .+|..||+|.+....      .....+.+|+.++..+ +||||+++++++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG------DEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS------STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc------ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            367899999999999999999999 788999999997532      2235788999999998 799999999885

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.60  E-value=9.6e-08  Score=83.10  Aligned_cols=67  Identities=21%  Similarity=0.177  Sum_probs=55.2

Q ss_pred             cCCeee-cccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQK-GAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~-~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .+.|.+ .+.||+|+||.||+|.+ .++..||||.+...     .......+.+|+.+|..+ +||||+++++++
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~   80 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-----PGHIRSRVFREVEMLYQCQGHRNVLELIEFF   80 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC-----SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC-----cchhHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            356777 47899999999999998 78899999999753     223346789999999885 799999999984

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.60  E-value=5.5e-08  Score=87.55  Aligned_cols=68  Identities=26%  Similarity=0.366  Sum_probs=56.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-c-------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D-------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~-------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .++|.+.+.||+|+||.||+|.+ .       .+..||||.+...    ........+.+|+.++..+ +|||||+++++
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  143 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD----ATEKDLSDLISEMEMMKMIGKHKNIINLLGA  143 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc----cCHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence            46799999999999999999986 2       2357999999752    2455667899999999999 89999999998


Q ss_pred             e
Q 024683          260 E  260 (264)
Q Consensus       260 ~  260 (264)
                      +
T Consensus       144 ~  144 (382)
T 3tt0_A          144 C  144 (382)
T ss_dssp             E
T ss_pred             e
Confidence            5

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.59  E-value=3.7e-08  Score=87.90  Aligned_cols=72  Identities=26%  Similarity=0.271  Sum_probs=57.4

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ...++|...+.||+|+||.||+|.+ .+|..||+|.+.....  ........+..|..+|..+ +|||||++++++
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~   87 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV--LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF   87 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh--hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE
Confidence            3468999999999999999999999 7889999999985211  0122345678899999876 899999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.59  E-value=7.4e-08  Score=84.34  Aligned_cols=65  Identities=22%  Similarity=0.297  Sum_probs=56.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~~  261 (264)
                      .++|.+.+.||+|+||.||+|.+ .++..||||.+...        ....+.+|+.+|..++ ||||+++++++.
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~  101 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--------KKKKIKREIKILENLRGGPNIITLADIVK  101 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--------CHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--------chHHHHHHHHHHHHcCCCCCEEEeeeeec
Confidence            36799999999999999999998 78899999998741        1356889999999997 999999998854

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.59  E-value=8.4e-08  Score=82.65  Aligned_cols=69  Identities=25%  Similarity=0.264  Sum_probs=54.8

Q ss_pred             cCCeeecc-cccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGA-PLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~-~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|.+.. .||+|+||.||+|.+   ..+..||||.+....   ........+.+|+.++..++||||+++++++
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   87 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAEANVMQQLDNPYIVRMIGIC   87 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc---cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            35678877 999999999999965   456789999997532   1334467899999999999999999999985

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.59  E-value=7.3e-08  Score=82.53  Aligned_cols=68  Identities=25%  Similarity=0.339  Sum_probs=56.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-c---CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~---~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .   .+..||+|.+...    ........+.+|+.++..++||||+++++++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   82 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD----CTLDNKEKFMSEAVIMKNLDHPHIVKLIGII   82 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT----SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc----cCchHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            46799999999999999999987 2   2346999998752    1345567899999999999999999999874

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.59  E-value=1.1e-07  Score=81.53  Aligned_cols=69  Identities=17%  Similarity=0.187  Sum_probs=53.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+....   ........+..+...+..++||||+++++++
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~   75 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDLDISMRTVDCPFTVTFYGAL   75 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC------CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc---CcHHHHHHHHHHHHHHHhCCCCeEEEEeeee
Confidence            46799999999999999999999 788999999997532   1222333344555568888999999999985

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.58  E-value=2.4e-08  Score=91.37  Aligned_cols=72  Identities=18%  Similarity=0.098  Sum_probs=58.3

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...++|...+.||+|+||.||++.+ .+|..||+|++.....  ........+..|..+|..++|||||++++++
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~--~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM--LKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh--hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            3467899999999999999999999 7899999999975211  0112234578999999999999999999874

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.58  E-value=1.8e-08  Score=86.85  Aligned_cols=69  Identities=25%  Similarity=0.353  Sum_probs=43.3

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||+|.+ .++..||||.+....    .......+.+|+.++..++||||+++++++
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   82 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK----CQTSMDELLKEIQAMSQCHHPNIVSYYTSF   82 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC--------------------CCCCCCCTTBCCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh----cchhHHHHHHHHHHHhhcCCCCEeeEEEEE
Confidence            357899999999999999999998 678999999987532    223356788999999999999999999874

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.58  E-value=2.8e-08  Score=89.70  Aligned_cols=70  Identities=20%  Similarity=0.217  Sum_probs=49.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHH-HhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL-LGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~i-L~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .++..||+|++......  .......+..|..+ +..++|||||++++++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~--~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~  108 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL--KKKEEKHIMSERNVLLKNVKHPFLVGLHFSF  108 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh--hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE
Confidence            56899999999999999999999 77899999999864321  23334567778776 5778999999999874

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.58  E-value=6.3e-08  Score=85.29  Aligned_cols=68  Identities=26%  Similarity=0.425  Sum_probs=56.1

Q ss_pred             cCCeeecccccccCceeEEEEEe--------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT--------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .++|...+.||+|+||.||+|.+        ..+..||+|.+...    ........+.+|+.+|..+ +||||++++++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  109 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGA  109 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC----CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEE
Confidence            46789999999999999999986        24568999999752    2445567899999999999 89999999998


Q ss_pred             e
Q 024683          260 E  260 (264)
Q Consensus       260 ~  260 (264)
                      +
T Consensus       110 ~  110 (334)
T 2pvf_A          110 C  110 (334)
T ss_dssp             E
T ss_pred             E
Confidence            5

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.58  E-value=6e-08  Score=82.93  Aligned_cols=64  Identities=28%  Similarity=0.371  Sum_probs=54.7

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||++.+ .|..||+|.+...       .....+.+|+.++..++||||+++++++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~h~~iv~~~~~~   83 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND-------ATAQAFLAEASVMTQLRHSNLVQLLGVI   83 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC-------C--HHHHHTHHHHTTCCCTTBCCEEEEE
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch-------hHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            46799999999999999999987 5789999998742       1346789999999999999999999973

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.58  E-value=2.6e-08  Score=88.27  Aligned_cols=72  Identities=24%  Similarity=0.373  Sum_probs=58.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc---ChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~---~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||.+........   .......+.+|+.+|..++|||||++++++
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~   98 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF   98 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            56799999999999999999998 7889999999986432110   111234577899999999999999999984

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.58  E-value=1.3e-07  Score=82.46  Aligned_cols=70  Identities=24%  Similarity=0.317  Sum_probs=55.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||++....   ...........|+..+..+ +|||||+++++|.
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~  127 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF---RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE  127 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC---CSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc---cChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE
Confidence            35799999999999999999999 689999999987532   2344445566677666555 8999999999853

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.58  E-value=2.2e-08  Score=92.07  Aligned_cols=70  Identities=19%  Similarity=0.174  Sum_probs=49.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||.+.....  ........+.+|+.+|..++|||||++++++
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~  217 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTALKYSF  217 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--C-------------CCCCCSCTTSCCEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhh--hhhHHHHHHHHHHHHHHhCCCCeEeeEEEEE
Confidence            46799999999999999999999 7899999999985321  1233445678999999999999999999884

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.58  E-value=9.2e-08  Score=82.99  Aligned_cols=69  Identities=28%  Similarity=0.321  Sum_probs=57.5

Q ss_pred             hcCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ..++|.+.+.||+|+||.||+|.+      .++..||||.+...    ........+.+|+.+|..+ +||||+++++++
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC----CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            356899999999999999999985      35678999999752    2344567799999999999 799999999984

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.57  E-value=1.5e-07  Score=81.05  Aligned_cols=67  Identities=30%  Similarity=0.410  Sum_probs=56.4

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+  ...||+|.+....   ........+.+|+.+|..++||||+.+++++
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~--~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   89 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTA---PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS   89 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEES--SSEEEEEEESCSS---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEE--cCceEEEEEeccC---CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence            45799999999999999999986  2359999997633   2455667899999999999999999999873

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.57  E-value=1.6e-08  Score=90.78  Aligned_cols=69  Identities=16%  Similarity=0.210  Sum_probs=55.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHH---HHHhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEI---SLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei---~iL~~l~HpNIV~l~g~  259 (264)
                      .+.|...+.||+|+||.||+|.+ .+|..||||++.....  ........+.+|+   .+|..++|||||++++.
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~  144 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER--PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLR  144 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC---CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccc--cchHHHHHHHHHHHHHHhccccCCHHHHHHHhh
Confidence            45789999999999999999998 7799999999985322  2344567899999   55566689999998843

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.57  E-value=1.2e-07  Score=81.68  Aligned_cols=67  Identities=27%  Similarity=0.407  Sum_probs=54.7

Q ss_pred             CCeeecccccccCceeEEEEEe-cC---CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|...+.||+|+||.||+|.+ ..   +..+|+|.+...    ........+.+|+.++..++||||++++++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   95 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC   95 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC----CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC----CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEE
Confidence            4688999999999999999987 22   235899998752    2455667899999999999999999999974

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.56  E-value=1.5e-07  Score=83.11  Aligned_cols=68  Identities=26%  Similarity=0.458  Sum_probs=55.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC----CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~----g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+ .+    +..||||.+...    ........+.+|+.++..++||||+++++++
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  115 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG----YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI  115 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC----CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            45788899999999999999987 32    235999999752    2344566799999999999999999999984

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.56  E-value=6.2e-08  Score=84.54  Aligned_cols=69  Identities=26%  Similarity=0.407  Sum_probs=57.5

Q ss_pred             hcCCeeecccccccCceeEEEEEec------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFTD------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||+|.+.      .+..||+|.+...    ........+.+|+.+|..++||||+++++++
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA----ASMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT----SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc----cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            3567999999999999999999862      3678999999752    2345566789999999999999999999984

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.55  E-value=5.5e-08  Score=92.66  Aligned_cols=70  Identities=17%  Similarity=0.207  Sum_probs=57.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....  ........+.+|+.+|..++|||||++++++
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~--~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~  253 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGEAMALNEKQILEKVNSRFVVSLAYAY  253 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh--hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE
Confidence            46799999999999999999999 7899999999975221  0122345688999999999999999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.55  E-value=9.8e-08  Score=85.42  Aligned_cols=67  Identities=25%  Similarity=0.287  Sum_probs=57.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC--------CCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE--------HDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~--------HpNIV~l~g~  259 (264)
                      ..+|.+.+.||+|+||.||+|.+ .++..||||.+..      .......+.+|+.+|..++        ||||++++++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~  109 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS------AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD  109 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec------CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence            46799999999999999999998 7889999999974      3455677899999999885        7889999987


Q ss_pred             ee
Q 024683          260 EK  261 (264)
Q Consensus       260 ~~  261 (264)
                      +.
T Consensus       110 ~~  111 (397)
T 1wak_A          110 FK  111 (397)
T ss_dssp             EE
T ss_pred             ee
Confidence            54

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.54  E-value=6.5e-08  Score=91.59  Aligned_cols=70  Identities=19%  Similarity=0.179  Sum_probs=58.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|++.....  ........+.+|+.+|..++|||||++++++
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~--~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~  254 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL--KKRKGYQGAMVEKKILAKVHSRFIVSLAYAF  254 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHh--hhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            46799999999999999999999 7899999999975221  1122346788999999999999999999873

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.54  E-value=4.8e-08  Score=85.88  Aligned_cols=65  Identities=23%  Similarity=0.318  Sum_probs=54.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .+|..||||.+.....       ...+.+|+.++..+ +||||+++++++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~E~~~l~~l~~h~~i~~~~~~~   74 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-------APQLHLEYRFYKQLGSGDGIPQVYYFG   74 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-------SCCHHHHHHHHHHHCSCTTSCCEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-------hHHHHHHHHHHHHhhCCCCCCEEEEEE
Confidence            46799999999999999999998 7889999999975321       13578999999999 999999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.53  E-value=1.4e-07  Score=80.53  Aligned_cols=63  Identities=32%  Similarity=0.530  Sum_probs=54.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .+|..||+|.+....         ..+.+|+.++..++||||+++++++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~   73 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---------EKAEREVKALAKLDHVNIVHYNGCW   73 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---------GGGHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---------HHHHHHHHHHHhCCCCCEEEEeeeE
Confidence            45789999999999999999999 688999999998521         2467899999999999999999875

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.53  E-value=2.1e-07  Score=83.37  Aligned_cols=80  Identities=18%  Similarity=0.163  Sum_probs=61.9

Q ss_pred             chHHHHHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc---ChHHHHHHHHHHHHHhcC-CCCCcee
Q 024683          181 LNEKYRRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQF-EHDNIVQ  255 (264)
Q Consensus       181 ~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~---~~~~~~~~~~Ei~iL~~l-~HpNIV~  255 (264)
                      +........++|...+.||+|+||.||+|.+ .+|..||||++........   .......+.+|+.++..+ +||||++
T Consensus        85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~  164 (365)
T 2y7j_A           85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT  164 (365)
T ss_dssp             HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3344445567899999999999999999999 6899999999986432110   112345688999999999 7999999


Q ss_pred             eeeee
Q 024683          256 YFGTE  260 (264)
Q Consensus       256 l~g~~  260 (264)
                      +++++
T Consensus       165 ~~~~~  169 (365)
T 2y7j_A          165 LIDSY  169 (365)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99874

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.53  E-value=2.2e-07  Score=81.75  Aligned_cols=58  Identities=33%  Similarity=0.389  Sum_probs=50.3

Q ss_pred             cccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          195 GAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       195 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      .+.||+|+||.||+|.+ .+|..||||.+...        ....+.+|+.++..+. |||||++++++
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~   75 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVF   75 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--------GHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh--------hhhhHHHHHHHHHHhcCCCCeeEEEEEE
Confidence            47899999999999999 78899999999741        2356789999999997 99999999984

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.53  E-value=2e-07  Score=80.86  Aligned_cols=69  Identities=28%  Similarity=0.314  Sum_probs=48.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||.+.....   .......+..+..++..++||||+++++++
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~   93 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN---KEENKRILMDLDVVLKSHDCPYIVQCFGTF   93 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC---HHHHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc---chHHHHHHHHHHHHHHhcCCCceeeEEEEE
Confidence            56899999999999999999999 7889999999986321   222233344455678888999999999984

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.53  E-value=3e-08  Score=87.09  Aligned_cols=68  Identities=28%  Similarity=0.434  Sum_probs=53.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCe----EEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFF----FAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~----vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .++..    ||+|.+....    .......+.+|+.++..++|||||+++++|
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   84 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS----GRQSFQAVTDHMLAIGSLDHAHIVRLLGLC   84 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT----SCSCBCSCCHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc----cHHHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence            35789999999999999999998 55654    7777775322    122234567899999999999999999985

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=98.52  E-value=1.2e-07  Score=90.84  Aligned_cols=67  Identities=22%  Similarity=0.358  Sum_probs=53.5

Q ss_pred             Ceeecc-cccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          191 SWQKGA-PLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       191 ~~~~~~-~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ++.... .||+|+||.||+|.+   ..+..||||.+....    .......+.+|+.+|..++|||||+++++|.
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~~E~~il~~l~hpniv~l~~~~~  406 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT----EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ  406 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC----SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEec
Confidence            344444 799999999999987   245679999998532    2334578999999999999999999999863

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.52  E-value=7.5e-08  Score=87.28  Aligned_cols=63  Identities=24%  Similarity=0.432  Sum_probs=46.7

Q ss_pred             Ceee-cccccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQK-GAPLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~-~~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|.. +++||+|+||.||+|.+   .++..||||.+.....       ...+.+|+.+|..++|||||++++++
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~E~~~l~~l~hpniv~~~~~~   87 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVF   87 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-------CHHHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-------CHHHHHHHHHHHhcCCCCeeeEeeEE
Confidence            3555 56899999999999996   3578999999975221       24678999999999999999999885

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.52  E-value=2.2e-07  Score=79.96  Aligned_cols=63  Identities=24%  Similarity=0.329  Sum_probs=51.7

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhc--CCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ--FEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~--l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ +|..||||.+...        ....+..|.+++..  ++||||+++++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--------~~~~~~~e~~~~~~~~l~h~niv~~~~~~   71 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--------DEKSWFRETELYNTVMLRHENILGFIASD   71 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--------GHHHHHHHHHHHHHTCCCCTTBCCEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--------cchhhHHHHHHHHHhhccCcCeeeEEEee
Confidence            46789999999999999999998 7889999998741        23455667777766  7999999999874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.52  E-value=9.8e-08  Score=84.13  Aligned_cols=68  Identities=28%  Similarity=0.392  Sum_probs=54.4

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+      ..+..||+|.+....    .......+.+|+.+|..+ +||||+++++++
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA----DSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc----CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            56899999999999999999986      234579999997522    233446789999999999 899999999985

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.51  E-value=1.1e-07  Score=83.76  Aligned_cols=71  Identities=14%  Similarity=0.212  Sum_probs=57.7

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcC------------hHHHHHHHHHHHHHhcCCCCCceee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQG------------EQSVLQLEQEISLLGQFEHDNIVQY  256 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~------------~~~~~~~~~Ei~iL~~l~HpNIV~l  256 (264)
                      .++|...+.||+|+||.||+|.+ +|..||+|.+.........            ......+.+|+.++..++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            57899999999999999999998 8899999999853211000            0112678999999999999999999


Q ss_pred             eeee
Q 024683          257 FGTE  260 (264)
Q Consensus       257 ~g~~  260 (264)
                      ++++
T Consensus       109 ~~~~  112 (348)
T 2pml_X          109 EGII  112 (348)
T ss_dssp             SEEE
T ss_pred             EEEE
Confidence            9984

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.51  E-value=1.4e-07  Score=91.44  Aligned_cols=69  Identities=17%  Similarity=0.255  Sum_probs=59.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-c-CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D-DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~-~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+.|.+.+.||+|+||.||+|.+ . +|..||||.+...    ........+.+|+.+|..++|||||++++++.
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  149 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS----GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVE  149 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS----CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc----CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEe
Confidence            47899999999999999999998 3 6889999998742    23455667899999999999999999999854

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.51  E-value=1.1e-07  Score=81.53  Aligned_cols=70  Identities=23%  Similarity=0.318  Sum_probs=49.0

Q ss_pred             cCCeeecccccccCceeEEEEEe--cCCC--eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT--DDGF--FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~--~~g~--~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+  .++.  .||+|.+.....  ........+.+|+.++..++||||+++++++
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   90 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDFIREVNAMHSLDHRNLIRLYGVV   90 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCcc--CCHHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            35789999999999999999987  3333  689999875321  1334567899999999999999999999974

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.50  E-value=1.5e-07  Score=90.58  Aligned_cols=62  Identities=27%  Similarity=0.344  Sum_probs=51.7

Q ss_pred             ccccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          196 APLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.||+|+||.||+|.+   ..+..||||.+....   ........+.+|+.+|..++|||||+++++|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~  439 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAEANVMQQLDNPYIVRMIGIC  439 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG---GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            4799999999999976   456789999997532   2334567899999999999999999999985

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.49  E-value=2.1e-07  Score=80.91  Aligned_cols=69  Identities=22%  Similarity=0.399  Sum_probs=58.6

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC--CCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE--HDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~--HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||++.+..+..||||.+....   ........+.+|+.++..++  ||||+++++++
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE---ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS---CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc---ccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            45799999999999999999998668899999998633   24556678999999999997  59999999874

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.47  E-value=1.8e-07  Score=81.95  Aligned_cols=68  Identities=22%  Similarity=0.385  Sum_probs=53.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeE--EEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFF--AVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~v--AvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..+  |+|.+....    .......+.+|+.+|..+ +||||+++++++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~   95 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGAC   95 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc----chHHHHHHHHHHHHHHhccCCCchhhhceee
Confidence            46789999999999999999998 666654  999987421    233456789999999999 899999999984

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.47  E-value=9.7e-08  Score=85.99  Aligned_cols=66  Identities=30%  Similarity=0.450  Sum_probs=54.1

Q ss_pred             CeeecccccccCceeEEEEEe-c-CC--CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-D-DG--FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~-~g--~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||+|.+ . .+  ..||+|.+...    ........+.+|+.+|..++|||||+++++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~  159 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC  159 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC----SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC----CCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            477889999999999999987 2 22  36899998742    2345567899999999999999999999975

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.47  E-value=6.8e-08  Score=83.98  Aligned_cols=74  Identities=20%  Similarity=0.307  Sum_probs=53.1

Q ss_pred             HhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCC-cChHHHHHHHHHHHHHhcC----CCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGT-QGEQSVLQLEQEISLLGQF----EHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~-~~~~~~~~~~~Ei~iL~~l----~HpNIV~l~g~~  260 (264)
                      ...++|...+.||+|+||.||+|.+ .+|..||||.+....... ........+.+|+.++..+    +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            3457899999999999999999998 788999999997533210 0011223456799999888    899999999974

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.46  E-value=1.1e-07  Score=85.14  Aligned_cols=71  Identities=20%  Similarity=0.142  Sum_probs=57.4

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ...+|...+.||+|+||.||+|.+ .+|..||+|++.....  ........+..|..+|..+ +||||+++++++
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~--~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~   90 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV--IQDDDVECTMVEKRVLALPGKPPFLTQLHSCF   90 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE
Confidence            367899999999999999999999 6788999999985321  0122346688999999988 799999999873

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.46  E-value=3.5e-07  Score=83.79  Aligned_cols=67  Identities=21%  Similarity=0.290  Sum_probs=55.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC------CCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF------EHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l------~HpNIV~l~g~~~  261 (264)
                      ...|.+.+.||+|+||.||+|.+ .++..||||.+..      .......+.+|+.++..+      +||||+.+++++.
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~  169 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN------EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT  169 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC------ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc
Confidence            45799999999999999999998 7789999999974      344456778888888776      5779999998753

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.46  E-value=1.3e-07  Score=82.49  Aligned_cols=70  Identities=29%  Similarity=0.484  Sum_probs=53.8

Q ss_pred             cCCeeecccccccCceeEEEEEe--cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC---CCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT--DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF---EHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIV~l~g~~~  261 (264)
                      .+.|...+.||+|+||.||+|.+  .+|..||+|.+......   ......+.+|+.++..+   +||||+++++++.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~   84 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE---EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT   84 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT---TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc---ccCCchhhHHHHHHHhhhccCCCCeEeeeeeee
Confidence            56899999999999999999998  46788999999753321   11123456777777665   8999999998864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.44  E-value=1.9e-07  Score=83.05  Aligned_cols=63  Identities=21%  Similarity=0.327  Sum_probs=53.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+.....         ...+|+.+|.++ +|||||++++++
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------~~~~E~~~l~~~~~hp~iv~~~~~~   85 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---------DPTEEIEILLRYGQHPNIITLKDVY   85 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---------CCHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---------ChHHHHHHHHHhcCCCCcCeEEEEE
Confidence            45799999999999999999999 7889999999986322         235688888877 799999999984

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.43  E-value=1.8e-07  Score=82.36  Aligned_cols=70  Identities=16%  Similarity=0.312  Sum_probs=54.6

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCC---CcChHHHHHHHHHHHHHhcCC---------CCCceee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQG---TQGEQSVLQLEQEISLLGQFE---------HDNIVQY  256 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~~~~~~~Ei~iL~~l~---------HpNIV~l  256 (264)
                      .++|...+.||+|+||.||+|.+ +|..||||.+......   .........+.+|+.+|+.++         |||||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35678899999999999999998 7899999999864321   012233467889999998885         8888888


Q ss_pred             eee
Q 024683          257 FGT  259 (264)
Q Consensus       257 ~g~  259 (264)
                      .+.
T Consensus        98 ~~~  100 (336)
T 2vuw_A           98 NSV  100 (336)
T ss_dssp             EEE
T ss_pred             cce
Confidence            776

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.42  E-value=3.8e-07  Score=88.16  Aligned_cols=68  Identities=25%  Similarity=0.359  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-c---CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D---DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~---~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||+|.+ .   .+..||+|.+...    ........+.+|+.+|..++|||||+++|++
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~  460 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC----TSDSVREKFLQEALTMRQFDHPHIVKLIGVI  460 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST----TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            46789999999999999999988 2   2457999998742    2445567899999999999999999999984

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.42  E-value=5e-07  Score=79.20  Aligned_cols=62  Identities=27%  Similarity=0.394  Sum_probs=48.9

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHH--HhcCCCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL--LGQFEHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~i--L~~l~HpNIV~l~g~  259 (264)
                      .++|...+.||+|+||.||+|.+ ++..||||++...      .  ...+..|.++  +..++||||+++++.
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~--~~~~~~e~~~~~~~~~~h~~i~~~~~~   75 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA------N--RQNFINEKNIYRVPLMEHDNIARFIVG   75 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG------G--HHHHHHHHHHHTSTTCCCTTBCCEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc------c--hhhHHHHHHHHHHHhccCcchhhheec
Confidence            57899999999999999999987 7789999999752      1  2334444444  456899999999975

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.42  E-value=3.1e-07  Score=81.60  Aligned_cols=66  Identities=21%  Similarity=0.201  Sum_probs=56.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-----------CCCceee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-----------HDNIVQY  256 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-----------HpNIV~l  256 (264)
                      ..+|.+.+.||+|+||.||+|.+ .+|..||||.+..      .......+.+|+.++..+.           ||||+++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~   91 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG------DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL   91 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC------CccchhhhhHHHHHHHHhhcccccchhccccchHHHH
Confidence            46799999999999999999998 7889999999974      3445567889999998876           8999999


Q ss_pred             eeee
Q 024683          257 FGTE  260 (264)
Q Consensus       257 ~g~~  260 (264)
                      ++++
T Consensus        92 ~~~~   95 (373)
T 1q8y_A           92 LDHF   95 (373)
T ss_dssp             CEEE
T ss_pred             HHHh
Confidence            9874

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.41  E-value=5.9e-07  Score=78.84  Aligned_cols=65  Identities=23%  Similarity=0.319  Sum_probs=54.6

Q ss_pred             HhcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhc--CCCCCceeeeeee
Q 024683          187 RRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ--FEHDNIVQYFGTE  260 (264)
Q Consensus       187 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~--l~HpNIV~l~g~~  260 (264)
                      ...++|...+.||+|+||.||+|.+ .|..||||.+...        ....+.+|++++..  ++||||+++++++
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~  105 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--------EERSWFREAEIYQTVMLRHENILGFIAAD  105 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--------GHHHHHHHHHHHHHSCCCCTTBCCEEEEE
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--------hHHHHHHHHHHHHHhhcCCCcEEEEEeee
Confidence            3456899999999999999999998 6889999998741        23567889998887  7899999999884

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.38  E-value=6.7e-07  Score=80.88  Aligned_cols=63  Identities=21%  Similarity=0.317  Sum_probs=51.0

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ...|...+.||+|+||.||+|.+..+..||+|.+.....         ...+|+.+|..++|||||++++++
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---------~~~~E~~il~~l~h~niv~l~~~~  101 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---------FKNRELQIMRIVKHPNVVDLKAFF  101 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---------hHHHHHHHHHhCCCCCcceEEEEE
Confidence            346999999999999999999994445589998864221         123799999999999999999886

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.38  E-value=1.1e-07  Score=92.05  Aligned_cols=68  Identities=24%  Similarity=0.358  Sum_probs=56.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||.|+||.||+|.+ .+|..||||.+...    ........+.+|+.+|..++|||||++++++
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~----~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~   81 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE----LSPKNRERWCLEIQIMKKLNHPNVVSAREVP   81 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC----CCHHHHHHHHHHHHHHHHCCBTTBCCEEECC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc----CCHHHHHHHHHHHHHHHhCCCCCCCceeeee
Confidence            46899999999999999999998 78899999998752    2455567899999999999999999998874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.36  E-value=5.7e-07  Score=78.67  Aligned_cols=64  Identities=23%  Similarity=0.292  Sum_probs=50.8

Q ss_pred             hcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC--CCCCceeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF--EHDNIVQYFGTE  260 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l--~HpNIV~l~g~~  260 (264)
                      ..++|...+.||+|+||.||+|.+ .|..||||.+..      ..  ...+..|.+++..+  +||||+++++++
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~------~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~  100 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFT------TE--EASWFRETEIYQTVLMRHENILGFIAAD  100 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEG------GG--HHHHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEec------cc--cchhhhHHHHHHHHhhcCCCeeeEEEEE
Confidence            356799999999999999999998 588999999974      11  23455666666554  899999999874

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.35  E-value=7.4e-07  Score=78.27  Aligned_cols=69  Identities=17%  Similarity=0.240  Sum_probs=56.0

Q ss_pred             cCCeeec-ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          189 IMSWQKG-APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~-~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      .+.|... +.||+|+||.||+|.+ .+|..||+|.+.....   .......+.+|+.++..+. ||||+++++++
T Consensus        27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR---GQDCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET---TEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc---chHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            4456666 8999999999999999 7899999999986332   2334567899999999995 69999999874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.35  E-value=9.2e-07  Score=76.51  Aligned_cols=63  Identities=22%  Similarity=0.213  Sum_probs=52.3

Q ss_pred             cCCeeec-ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHH-hcCCCCCceeeeeeee
Q 024683          189 IMSWQKG-APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL-GQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~-~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL-~~l~HpNIV~l~g~~~  261 (264)
                      .++|... +.||+|+||.||++.+ .++..||+|.+..      .    ..+.+|+.++ ..++||||+++++++.
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~----~~~~~e~~~~~~~~~h~~i~~~~~~~~   81 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------C----PKARREVELHWRASQCPHIVRIVDVYE   81 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------S----HHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------c----HHHHHHHHHHHHhccCCCchhHHhhhh
Confidence            4567776 7899999999999999 7889999999974      1    3567888888 6669999999998753

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.35  E-value=6e-07  Score=80.25  Aligned_cols=66  Identities=15%  Similarity=0.063  Sum_probs=43.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHH---HHHhcCCCCCceeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEI---SLLGQFEHDNIVQYF  257 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei---~iL~~l~HpNIV~l~  257 (264)
                      ...|...+.||+|+||.||+|.+ .+|..||||.+.....  ........+..|+   .+|.. +|||||+++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~  130 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE--NSRSELERLHEATFAAARLLG-ESPEEARDR  130 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST--THHHHHHHHHHHHHHHHHHHC----------
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc--ccccHHHHHHHHHHHHHHhcc-cChhhhhhc
Confidence            34589999999999999999998 7889999999987432  1334456677885   45555 799988754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.33  E-value=9.9e-07  Score=80.02  Aligned_cols=63  Identities=22%  Similarity=0.213  Sum_probs=51.2

Q ss_pred             cCCeeec-ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHH-hcCCCCCceeeeeeee
Q 024683          189 IMSWQKG-APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL-GQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~-~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL-~~l~HpNIV~l~g~~~  261 (264)
                      .++|... +.||+|+||.||+|.+ .+|..||||.+..      .    ..+.+|+.++ ...+|||||++++++.
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~----~~~~~E~~~~~~~~~hp~iv~l~~~~~  125 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------C----PKARREVELHWRASQCPHIVRIVDVYE  125 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------S----HHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc------c----hhHHHHHHHHHHhcCCCCcceEeEEEe
Confidence            4567765 7899999999999999 7899999999974      1    3467888887 4558999999998753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.31  E-value=6e-07  Score=77.11  Aligned_cols=65  Identities=22%  Similarity=0.286  Sum_probs=54.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||+|.+....       ....+.+|+.++..+ +||||+.+++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~e~~~~~~l~~~~~i~~~~~~~   75 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-------DAPQLRDEYRTYKLLAGCTGIPNVYYFG   75 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-------TSCCHHHHHHHHHHTTTCTTCCCEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-------ccHHHHHHHHHHHHHhcCCCCCeEEeec
Confidence            46799999999999999999998 788999999987522       123578899999999 799999998874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.26  E-value=6.3e-07  Score=79.88  Aligned_cols=72  Identities=18%  Similarity=0.283  Sum_probs=50.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC-----CCeEEEEEeecCCCCCcC-hH-----HHHHHHHHHHHHhcCCCCCceee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD-----GFFFAVKEVSLQDQGTQG-EQ-----SVLQLEQEISLLGQFEHDNIVQY  256 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~-----g~~vAvK~l~~~~~~~~~-~~-----~~~~~~~Ei~iL~~l~HpNIV~l  256 (264)
                      ..+|.+.+.||+|+||.||+|.+ .+     +..||||.+......... ..     ....+..|+..+..++|||||++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            45899999999999999999988 32     578999998753210000 00     01224456667788899999999


Q ss_pred             eeee
Q 024683          257 FGTE  260 (264)
Q Consensus       257 ~g~~  260 (264)
                      ++++
T Consensus       114 ~~~~  117 (364)
T 3op5_A          114 WGSG  117 (364)
T ss_dssp             EEEE
T ss_pred             Eeee
Confidence            9985

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.26  E-value=7.2e-07  Score=86.48  Aligned_cols=70  Identities=20%  Similarity=0.163  Sum_probs=56.6

Q ss_pred             hcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      ...+|.+.+.||+|+||.||++.+ .++..||||++.....  ........+..|..+|..+ +||||+.++++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~--~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~  410 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV--IQDDDVECTMVEKRVLALPGKPPFLTQLHSC  410 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH--HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence            457899999999999999999999 7888999999985221  0122345678999999987 79999999887

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.26  E-value=1.7e-06  Score=79.34  Aligned_cols=63  Identities=29%  Similarity=0.258  Sum_probs=50.5

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      +.|...+.||+|+||+||.+...+|..||||.+...        ....+.+|+.+|..+ +|||||++++++
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--------~~~~~~~E~~~l~~l~~HpnIv~~~~~~   78 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--------FCDIALMEIKLLTESDDHPNVIRYYCSE   78 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--------GHHHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--------HHHHHHHHHHHHHhccCCCCcCeEEEEE
Confidence            445667899999999997654467899999998741        124578999999876 899999999874

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.26  E-value=3.3e-07  Score=80.25  Aligned_cols=75  Identities=25%  Similarity=0.358  Sum_probs=57.2

Q ss_pred             HHhcCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc-ChHHHHHHHHHHHHHhcCC--CCCceeeeeee
Q 024683          186 RRRIMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ-GEQSVLQLEQEISLLGQFE--HDNIVQYFGTE  260 (264)
Q Consensus       186 ~~~~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~-~~~~~~~~~~Ei~iL~~l~--HpNIV~l~g~~  260 (264)
                      ....+.|...+.||+|+||.||+|.+ .+|..||||.+........ .......+.+|+.++..+.  ||||+++++++
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~  117 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF  117 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence            33467899999999999999999998 7889999999986432110 0012234678999999996  59999999884

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.25  E-value=2.2e-07  Score=82.78  Aligned_cols=71  Identities=20%  Similarity=0.248  Sum_probs=55.2

Q ss_pred             cCCeeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ..+|...+.||+|+||.||++.+    .+|..||||++...... ........+.+|+.+|..+ +||||+++++++
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  128 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV-QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF  128 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE-EEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhh-hhhhHHHHHHHHHHHHHHccCCCceeEEEEEE
Confidence            46899999999999999999987    37889999998753210 0112234567899999999 699999999874

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.24  E-value=1.6e-07  Score=81.76  Aligned_cols=69  Identities=23%  Similarity=0.428  Sum_probs=55.0

Q ss_pred             hcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..++|...+.||+|+||.||+|.+.  ..+|+|.+.....   .......+.+|+.++..++||||+++++++.
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   99 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERD---NEDQLKAFKREVMAYRQTRHENVVLFMGACM   99 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEES--SSEEEEECCCCSC---CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEc--CeEEEEEeecCCC---CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe
Confidence            3678999999999999999999873  2599999976432   1222345778999999999999999999853

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.23  E-value=1.2e-06  Score=76.32  Aligned_cols=66  Identities=26%  Similarity=0.291  Sum_probs=54.7

Q ss_pred             cCCeeecccccccCceeEEEEEe--cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCC------ceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT--DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN------IVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN------IV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+  .+|..||||.+..      .......+.+|+.++..++|+|      |+++++++
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~   86 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN------VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF   86 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS------SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec------CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence            46899999999999999999987  4678999999974      3455677889999998887665      88888764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.23  E-value=9.5e-07  Score=75.79  Aligned_cols=65  Identities=23%  Similarity=0.256  Sum_probs=54.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||.+.....       ...+.+|+.++..++|++++..++.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~l~~l~~~~~i~~~~~~   73 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------HPQLHIESKIYKMMQGGVGIPTIRWC   73 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-------CCHHHHHHHHHHHHTTSTTCCCEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-------hhHHHHHHHHHHHhhcCCCCCccccc
Confidence            56899999999999999999998 7889999999875321       13588999999999999887766553

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.22  E-value=1.4e-06  Score=77.55  Aligned_cols=65  Identities=15%  Similarity=0.241  Sum_probs=52.6

Q ss_pred             hcCCeeecccccccCceeEEEEE-----e-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC---CCCceeeee
Q 024683          188 RIMSWQKGAPLGSGSFGSVYEGF-----T-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE---HDNIVQYFG  258 (264)
Q Consensus       188 ~~~~~~~~~~lG~G~fG~Vy~~~-----~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~---HpNIV~l~g  258 (264)
                      ....|...+.||+|+||.||+|.     . .++..||||.+...        ....+..|+.++..++   |+||+.+++
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--------~~~~~~~e~~~~~~l~~~~~~~iv~~~~  134 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--------NPWEFYIGTQLMERLKPSMQHMFMKFYS  134 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--------CHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--------ChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence            35679999999999999999994     3 67889999999752        1346788888888887   999999998


Q ss_pred             ee
Q 024683          259 TE  260 (264)
Q Consensus       259 ~~  260 (264)
                      ++
T Consensus       135 ~~  136 (365)
T 3e7e_A          135 AH  136 (365)
T ss_dssp             EE
T ss_pred             ee
Confidence            84

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.20  E-value=1.5e-06  Score=76.84  Aligned_cols=73  Identities=21%  Similarity=0.260  Sum_probs=49.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-c---CCCeEEEEEeecCCCCCcCh------HHHHHHHHHHHHHhcCCCCCceeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D---DGFFFAVKEVSLQDQGTQGE------QSVLQLEQEISLLGQFEHDNIVQYFG  258 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~---~g~~vAvK~l~~~~~~~~~~------~~~~~~~~Ei~iL~~l~HpNIV~l~g  258 (264)
                      .++|...+.||+|+||.||+|.+ .   .+..+|+|.+..........      .....+.+|+.++..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            35799999999999999999998 4   67889999998532100000      01134678889999999999999999


Q ss_pred             eee
Q 024683          259 TEK  261 (264)
Q Consensus       259 ~~~  261 (264)
                      ++.
T Consensus       116 ~~~  118 (345)
T 2v62_A          116 SGL  118 (345)
T ss_dssp             EEE
T ss_pred             ccc
Confidence            753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.19  E-value=9.7e-07  Score=75.64  Aligned_cols=65  Identities=23%  Similarity=0.256  Sum_probs=51.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .++..||||.+.....       ...+.+|+.++..++|+|++..++.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~l~~l~~~~~i~~~~~~   73 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------HPQLHIESKIYKMMQGGVGIPTIRWC   73 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----------CCCHHHHHHHHHHHTTSTTCCCEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-------chHHHHHHHHHHHhcCCCCCCeeeee
Confidence            56899999999999999999998 7889999998764221       13478899999999999888776653

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.18  E-value=5.5e-07  Score=82.67  Aligned_cols=63  Identities=30%  Similarity=0.342  Sum_probs=49.8

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      ..|...+.||+|+||.|+.....+|..||||.+.....        ..+.+|+.+|..+ +|||||++++++
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--------~~~~~E~~~l~~l~~HpnIv~l~~~~   87 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--------SFADREVQLLRESDEHPNVIRYFCTE   87 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--------EECHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--------HHHHHHHHHHHhccCCCCcCeEEEEE
Confidence            45889999999999996543335789999999975221        1256899999999 799999999874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.14  E-value=3.3e-06  Score=75.73  Aligned_cols=66  Identities=24%  Similarity=0.360  Sum_probs=54.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCC-----ceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDN-----IVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpN-----IV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .++..||||++..      .......+..|+.++..++ |+|     |+.+++++
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  125 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN------KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF  125 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS------SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec------cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence            67899999999999999999998 7788999999974      3445567888999988875 554     88887763

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.14  E-value=3.8e-06  Score=74.09  Aligned_cols=63  Identities=24%  Similarity=0.204  Sum_probs=48.4

Q ss_pred             cCCeeec-ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHH-HHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKG-APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEI-SLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~-~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei-~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|... +.||+|+||.||+|.+ .+|..||||.+..      ....    .+|+ ..+..+.||||+++++++.
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~------~~~~----~~e~~~~~~~~~h~~i~~~~~~~~   92 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD------SPKA----RQEVDHHWQASGGPHIVCILDVYE   92 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEES------SHHH----HHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecC------cHHH----HHHHHHHHHhcCCCChHHHHHHHh
Confidence            5678885 4699999999999999 6899999999974      2222    2233 3356679999999998853

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.12  E-value=6.1e-07  Score=79.55  Aligned_cols=58  Identities=16%  Similarity=0.100  Sum_probs=48.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-c--------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D--------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY  256 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~--------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l  256 (264)
                      .++|.+.+.||+|+||.||+|.+ .        .+..||+|.+...          ..+.+|+.++..++|||||++
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------~~~~~E~~~l~~l~h~niv~~  107 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------GRLFNEQNFFQRAAKPLQVNK  107 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------STHHHHHHHHHHHCCHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------chHHHHHHHHHHhcccchhhh
Confidence            36899999999999999999998 4        3789999999852          257899999999999999984

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.10  E-value=3.4e-06  Score=74.02  Aligned_cols=65  Identities=22%  Similarity=0.218  Sum_probs=53.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCC-CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCC------ceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDG-FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN------IVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g-~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN------IV~l~g~  259 (264)
                      .++|...+.||+|+||.||+|.+ .++ ..||+|.+..      .......+.+|+.++..++|+|      ++.++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~   90 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN------VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDW   90 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc------cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee
Confidence            46899999999999999999998 454 6899999974      3445667889999999988766      7777765

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.05  E-value=1e-05  Score=69.98  Aligned_cols=71  Identities=11%  Similarity=0.082  Sum_probs=51.6

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCc---C-h---------HHHHHHHHHHHHHhcCCCCCcee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---G-E---------QSVLQLEQEISLLGQFEHDNIVQ  255 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~---~-~---------~~~~~~~~Ei~iL~~l~HpNIV~  255 (264)
                      ...|...+.||+|+||.||+|.+.+|..||+|.++.......   . .         .....+.+|+.+|..++|++++.
T Consensus        89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~  168 (282)
T 1zar_A           89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK  168 (282)
T ss_dssp             TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC
T ss_pred             CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCe
Confidence            456778899999999999999986688999999975321100   0 0         23567899999999998666666


Q ss_pred             eeee
Q 024683          256 YFGT  259 (264)
Q Consensus       256 l~g~  259 (264)
                      +++.
T Consensus       169 ~~~~  172 (282)
T 1zar_A          169 VYAW  172 (282)
T ss_dssp             EEEE
T ss_pred             EEec
Confidence            5554

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=97.98  E-value=6.2e-06  Score=76.84  Aligned_cols=61  Identities=23%  Similarity=0.285  Sum_probs=49.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY  256 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l  256 (264)
                      .+.|.+.+.||+|+||.||+|.+ .++..||||++.....       ...+..|+.++..+.|++++..
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~~~~E~~il~~L~~~~~i~~   67 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------HPQLLYESKIYRILQGGTGIPN   67 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-------SCCHHHHHHHHHHTTTSTTCCC
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-------cHHHHHHHHHHHHhcCCCCCCe
Confidence            46899999999999999999998 7889999999875322       1247899999999987554443

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.92  E-value=4.2e-06  Score=76.12  Aligned_cols=60  Identities=17%  Similarity=0.204  Sum_probs=47.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCC
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH  250 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~H  250 (264)
                      ...|...+.||+|+||.||+|.+ .+|..||||++.....  ........+.+|+.++..+.|
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~--~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER--PPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC------CCHHHHHHHHGGGGSTT
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC--ccHHHHHHHHHHHHHHHhhcc
Confidence            44588899999999999999998 7899999999884322  122335678999999999987

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.69  E-value=3.4e-05  Score=65.59  Aligned_cols=63  Identities=19%  Similarity=0.174  Sum_probs=45.6

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCe--EEEEEeecCCCCCc-------------------ChHHHHHHHHHHHHHhcC
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFF--FAVKEVSLQDQGTQ-------------------GEQSVLQLEQEISLLGQF  248 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~--vAvK~l~~~~~~~~-------------------~~~~~~~~~~Ei~iL~~l  248 (264)
                      -|.+...||+|+||.||+|.+ .+|..  ||||+++.......                   .......+.+|+.+|..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            367889999999999999998 78888  99999764321100                   001124688999999998


Q ss_pred             CCCCc
Q 024683          249 EHDNI  253 (264)
Q Consensus       249 ~HpNI  253 (264)
                      .|+++
T Consensus       128 ~~~~i  132 (258)
T 1zth_A          128 KEAGV  132 (258)
T ss_dssp             HHTTC
T ss_pred             HhCCC
Confidence            87754

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.67  E-value=4.9e-05  Score=71.74  Aligned_cols=66  Identities=14%  Similarity=0.072  Sum_probs=41.0

Q ss_pred             eecccccccCceeEEEEEecCCCeEEEEEeecCCCCCc---ChHHHHHHHHHHHHHhcCCCCCce--eeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQ---GEQSVLQLEQEISLLGQFEHDNIV--QYFGT  259 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~---~~~~~~~~~~Ei~iL~~l~HpNIV--~l~g~  259 (264)
                      ...+.||+|+||.||+|.+ .+..+++|..........   .......+.+|+.+|..++|||||  .+++.
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~  409 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV  409 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE
Confidence            3467899999999999965 567899998764222110   111245689999999999999999  55544

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=96.86  E-value=0.00024  Score=64.41  Aligned_cols=34  Identities=18%  Similarity=0.197  Sum_probs=30.9

Q ss_pred             CeeecccccccCceeEEEEEecCCCeEEEEEeec
Q 024683          191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSL  224 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~  224 (264)
                      -|.+...||.|+||.||+|....|..||||+++.
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~  129 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRL  129 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence            4889999999999999999987789999999864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=95.09  E-value=0.022  Score=53.79  Aligned_cols=64  Identities=13%  Similarity=-0.043  Sum_probs=40.3

Q ss_pred             ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCC-----cChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          196 APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGT-----QGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~-----~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      ...+.|++|.+..+.. -.|..+|+|.+.......     ........|.+|+++|.++ .|+||++++++
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~  310 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH  310 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE
Confidence            3456667776666554 568899999998643211     1133456799999999999 69999999988

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=93.01  E-value=0.011  Score=54.54  Aligned_cols=61  Identities=7%  Similarity=0.010  Sum_probs=17.2

Q ss_pred             eecccccccCceeEEEEEe-cCCCeEEE------EEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFT-DDGFFFAV------KEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~-~~g~~vAv------K~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+.+.||   ||.||+|.+ .....|||      |.+....   ........+.+|..++..++|||+++.+++
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~---~~~e~~~~~~rea~l~~~~~H~niv~~h~f  212 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG---VSEKRLTSLVRRATLKENEQIPKYEKIHNF  212 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC--------------------------------------CBCCCE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCcccccccc---ccccccccccccccccccccccccCCCcce
Confidence            3456666   999999998 43467888      6655321   123344568889999999999999999887

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=88.64  E-value=0.74  Score=37.96  Aligned_cols=68  Identities=12%  Similarity=0.062  Sum_probs=48.9

Q ss_pred             HHhcCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeee
Q 024683          186 RRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGT  259 (264)
Q Consensus       186 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~  259 (264)
                      ......|.....+|.|+++.||+... .+..+++|.......     .....+.+|+.+|..+. |.++.+++++
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~-----~~~~~~~~E~~~l~~l~~~~~vP~v~~~   78 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYK-----GTTYDVEREKDMMLWLEGKLPVPKVLHF   78 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGT-----TSTTCHHHHHHHHHHHTTTSCCCCEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccC-----CCHHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence            34456788888899999999999875 467899999874211     11135788999998884 5666667665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	264
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-10
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-09
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-09
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	5e-09
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-09
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-09
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	9e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-08
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-08
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-08
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-08
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-08
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-08
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-08
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-07
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-07
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	9e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-05
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-04
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-04

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 3e-10
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG G F +VY+    +     A+K++ L  +    +       +EI LL +  H NI+  
Sbjct: 6   LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 65

Query: 257 FG 258
             
Sbjct: 66  LD 67

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.3 bits (135), Expect = 6e-10
 Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 10/80 (12%)

Query: 181 LNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLE 239
           L+++Y         G  LG G    V+           AVK +       +     L+  
Sbjct: 5   LSDRYE-------LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLA--RDPSFYLRFR 55

Query: 240 QEISLLGQFEHDNIVQYFGT 259
           +E        H  IV  + T
Sbjct: 56  REAQNAAALNHPAIVAVYDT 75

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 8e-10
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 182 NEKYRRRIMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQE 241
            +++     + +    LG+G FG V+ G+ +     AVK +       QG  S      E
Sbjct: 5   EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK------QGSMSPDAFLAE 58

Query: 242 ISLLGQFEHDNIVQYFG 258
            +L+ Q +H  +V+ + 
Sbjct: 59  ANLMKQLQHQRLVRLYA 75

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.4 bits (133), Expect = 1e-09
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 197 PLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
            +G GSFG+VY      +    A+K++S   +  Q  +    + +E+  L +  H N +Q
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQKLRHPNTIQ 79

Query: 256 YFG 258
           Y G
Sbjct: 80  YRG 82

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 1e-09
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           +GSG FG V+ G+  +    A+K +       +         +E  ++ +  H  +VQ +
Sbjct: 13  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE------DFIEEAEVMMKLSHPKLVQLY 66

Query: 258 G 258
           G
Sbjct: 67  G 67

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 1e-09
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           LG+G FG V  G     +  A+K +              +  +E  ++    H+ +VQ +
Sbjct: 12  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED------EFIEEAKVMMNLSHEKLVQLY 65

Query: 258 GT 259
           G 
Sbjct: 66  GV 67

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 2e-09
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 180 SLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQD-QGTQGEQSVLQ 237
           ++++ Y         G  LGSG F  V +      G  +A K +  +  + ++   S   
Sbjct: 7   NVDDYY-------DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59

Query: 238 LEQEISLLGQFEHDNIVQYFG 258
           +E+E+S+L + +H N++    
Sbjct: 60  IEREVSILKEIQHPNVITLHE 80

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 3e-09
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           W+    LG G+FG VY+    +     A K +  +      E+ +     EI +L   +H
Sbjct: 14  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS-----EEELEDYMVEIDILASCDH 68

Query: 251 DNIVQYFG 258
            NIV+   
Sbjct: 69  PNIVKLLD 76

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 3e-09
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
           ++R   ++ G  LG GSF +V           +A+K +  +      E  V  + +E  +
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH--IIKENKVPYVTRERDV 61

Query: 245 LGQFEHDNIVQYFGT 259
           + + +H   V+ + T
Sbjct: 62  MSRLDHPFFVKLYFT 76

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 3e-09
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++ G PLG G FG+VY        F  A+K +       +      QL +E+ +     H
Sbjct: 8   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRH 65

Query: 251 DNIVQYFGT 259
            NI++ +G 
Sbjct: 66  PNILRLYGY 74

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 3e-09
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 192 WQKGAPLGSGSFGSVYEGF--TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE 249
           ++  A +G G++G V++     + G F A+K V +Q        S ++    +  L  FE
Sbjct: 9   YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68

Query: 250 HDNIVQYFG 258
           H N+V+ F 
Sbjct: 69  HPNVVRLFD 77

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 3e-09
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           W     LG G++G V            AVK V ++    +       +++EI +     H
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK----RAVDCPENIKKEICINKMLNH 62

Query: 251 DNIVQYFG 258
           +N+V+++G
Sbjct: 63  ENVVKFYG 70

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 53.7 bits (128), Expect = 4e-09
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
                +G G++G VY+   + G  FA+K++ L+ +            +EIS+L + +H N
Sbjct: 5   HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPS---TTIREISILKELKHSN 61

Query: 253 IVQYFG 258
           IV+ + 
Sbjct: 62  IVKLYD 67

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 4e-09
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 191 SWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
               G  +GSGSFG+VY+G        AVK +++     Q  Q     + E+ +L +  H
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQ---AFKNEVGVLRKTRH 63

Query: 251 DNIVQYFGTE 260
            NI+ + G  
Sbjct: 64  VNILLFMGYS 73

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 4e-09
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 13/89 (14%)

Query: 172 LMELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQ 230
           L  +V      +KY        +   +G G+ G+VY       G   A+++++LQ Q   
Sbjct: 9   LRSIVSVGDPKKKY-------TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--- 58

Query: 231 GEQSVLQLEQEISLLGQFEHDNIVQYFGT 259
                  +  EI ++ + ++ NIV Y  +
Sbjct: 59  --PKKELIINEILVMRENKNPNIVNYLDS 85

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 5e-09
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 11/81 (13%)

Query: 179 FSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
           + + E+Y       Q  +P+GSG++GSV   F T  G   AVK++S   Q     +   +
Sbjct: 14  WEVPERY-------QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---R 63

Query: 238 LEQEISLLGQFEHDNIVQYFG 258
             +E+ LL   +H+N++    
Sbjct: 64  TYRELRLLKHMKHENVIGLLD 84

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 5e-09
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
              LG G FG V+ G  +     A+K +       +         QE  ++ +  H+ +V
Sbjct: 22  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE------AFLQEAQVMKKLRHEKLV 75

Query: 255 QYFG 258
           Q + 
Sbjct: 76  QLYA 79

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.6 bits (128), Expect = 5e-09
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 179 FSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
           +SL +        +Q    LG+GSFG V+      +G ++A+K +  +       + V  
Sbjct: 1   YSLQD--------FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI--VVRLKQVEH 50

Query: 238 LEQEISLLGQFEHDNIVQYFGT 259
              E  +L    H  I++ +GT
Sbjct: 51  TNDERLMLSIVTHPFIIRMWGT 72

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 6e-09
 Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 179 FSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
           F +  +Y          + +G G++G V   +   +    A+K++S  +     +    +
Sbjct: 4   FDVGPRYT-------NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH----QTYCQR 52

Query: 238 LEQEISLLGQFEHDNIVQYFG 258
             +EI +L +F H+NI+    
Sbjct: 53  TLREIKILLRFRHENIIGIND 73

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 8e-09
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 7/65 (10%)

Query: 198 LGSGSFGSVYEGF---TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
           LG G+FGSV +G           A+K +    +    +    ++ +E  ++ Q ++  IV
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIV 72

Query: 255 QYFGT 259
           +  G 
Sbjct: 73  RLIGV 77

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.7 bits (126), Expect = 9e-09
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 5/69 (7%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +     LG+G+F  V            A+K ++ +      E     +E EI++L + +H
Sbjct: 11  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL----EGKEGSMENEIAVLHKIKH 66

Query: 251 DNIVQYFGT 259
            NIV     
Sbjct: 67  PNIVALDDI 75

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 9e-09
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++K + LG+G+ G V++      G   A K + L+ +         Q+ +E+ +L +   
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----PAIRNQIIRELQVLHECNS 63

Query: 251 DNIVQYFG 258
             IV ++G
Sbjct: 64  PYIVGFYG 71

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 52.4 bits (125), Expect = 1e-08
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 6/69 (8%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +     LGSG+FG V+       G  F  K ++              ++ EIS++ Q  H
Sbjct: 31  YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-----PLDKYTVKNEISIMNQLHH 85

Query: 251 DNIVQYFGT 259
             ++     
Sbjct: 86  PKLINLHDA 94

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 52.4 bits (125), Expect = 1e-08
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 6/69 (8%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +     LG+G+FG V+       G  FA K V         E     + +EI  +    H
Sbjct: 28  YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-----ESDKETVRKEIQTMSVLRH 82

Query: 251 DNIVQYFGT 259
             +V     
Sbjct: 83  PTLVNLHDA 91

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (121), Expect = 3e-08
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++K   +G G++G+V++    +     A+K V L D       S L   +EI LL + +H
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL---REICLLKELKH 60

Query: 251 DNIVQYFG 258
            NIV+   
Sbjct: 61  KNIVRLHD 68

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 3e-08
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 198 LGSGSFGSVYEGF---TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIV 254
           LGSG+FG+V +G+          AVK +  +      +    +L  E +++ Q ++  IV
Sbjct: 15  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPYIV 71

Query: 255 QYFG 258
           +  G
Sbjct: 72  RMIG 75

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 3e-08
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 14/80 (17%)

Query: 181 LNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLE 239
           L EKY            LG G FG V+    T     +  K V ++            ++
Sbjct: 3   LYEKYM-------IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV------LVK 49

Query: 240 QEISLLGQFEHDNIVQYFGT 259
           +EIS+L    H NI+    +
Sbjct: 50  KEISILNIARHRNILHLHES 69

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (121), Expect = 3e-08
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 198 LGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
           LG GSFG V  G     +      AVK   L+       +++    +E++ +   +H N+
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKC--LKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73

Query: 254 VQYFG 258
           ++ +G
Sbjct: 74  IRLYG 78

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 3e-08
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +QK   +G G++G VY+      G   A+K++ L    T+ E       +EISLL +  H
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD---TETEGVPSTAIREISLLKELNH 60

Query: 251 DNIVQYFG 258
            NIV+   
Sbjct: 61  PNIVKLLD 68

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 4e-08
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 10/74 (13%)

Query: 186 RRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISL 244
           R + +S+     +G+GSFG VY+    D G   A+K+V    +            +E+ +
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---------FKNRELQI 66

Query: 245 LGQFEHDNIVQYFG 258
           + + +H NIV+   
Sbjct: 67  MRKLDHCNIVRLRY 80

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 4e-08
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
           +    +G G FG V  G    G   AVK +         + +      E S++ Q  H N
Sbjct: 10  KLLQTIGKGEFGDVMLG-DYRGNKVAVKCIKN-------DATAQAFLAEASVMTQLRHSN 61

Query: 253 IVQYFGT 259
           +VQ  G 
Sbjct: 62  LVQLLGV 68

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 4e-08
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 187 RRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
             +  ++K A +G G+FG V++      G   A+K+V +++   + E   +   +EI +L
Sbjct: 7   DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKIL 63

Query: 246 GQFEHDNIVQYFG 258
              +H+N+V    
Sbjct: 64  QLLKHENVVNLIE 76

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 4e-08
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 11/81 (13%)

Query: 179 FSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQ 237
           + +   YR          P+GSG++G+V        G   A+K++    Q    E    +
Sbjct: 14  WEVRAVYR-------DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS---ELFAKR 63

Query: 238 LEQEISLLGQFEHDNIVQYFG 258
             +E+ LL    H+N++    
Sbjct: 64  AYRELRLLKHMRHENVIGLLD 84

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 5e-08
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 7/61 (11%)

Query: 198 LGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYF 257
           +G G FG V+ G    G   AVK  S +      E+     E EI       H+NI+ + 
Sbjct: 11  IGKGRFGEVWRG-KWRGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFI 63

Query: 258 G 258
            
Sbjct: 64  A 64

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 6e-08
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++    +G+GS+G   +     DG     KE+         +Q    L  E++LL + +H
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQ---MLVSEVNLLRELKH 62

Query: 251 DNIVQYF 257
            NIV+Y+
Sbjct: 63  PNIVRYY 69

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 7e-08
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE-QSVLQLEQEISLLGQF- 248
           +Q G  LGSG FGSVY G    D    A+K V        GE  +  ++  E+ LL +  
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65

Query: 249 -EHDNIVQYFG 258
                +++   
Sbjct: 66  SGFSGVIRLLD 76

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.1 bits (119), Expect = 7e-08
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQD-QGTQGEQSVLQLEQEISLLGQFEHDNIVQ 255
           +G G FG VY     D G  +A+K +  +  +  QGE   L     +SL+   +   IV 
Sbjct: 12  IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 71

Query: 256 YFG 258
              
Sbjct: 72  MSY 74

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (119), Expect = 7e-08
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG G +G VYEG         AVK +       +      +  +E +++ + +H N+VQ 
Sbjct: 25  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE------EFLKEAAVMKEIKHPNLVQL 78

Query: 257 FGT 259
            G 
Sbjct: 79  LGV 81

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 1e-07
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 195 GAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           G  +G G FG V++G      +     A+K           +    +  QE   + QF+H
Sbjct: 12  GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS----DSVREKFLQEALTMRQFDH 67

Query: 251 DNIVQYFG 258
            +IV+  G
Sbjct: 68  PHIVKLIG 75

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (117), Expect = 1e-07
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 177 YNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSV 235
           Y+  + +     +  +Q   P+GSG+ G V   +        A+K++S      Q +   
Sbjct: 4   YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHA 60

Query: 236 LQLEQEISLLGQFEHDNIVQYFG 258
            +  +E+ L+    H NI+    
Sbjct: 61  KRAYRELVLMKCVNHKNIISLLN 83

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 2e-07
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           LG GSFG V+         FFA+K +         +     +E+ + L   +EH  +   
Sbjct: 10  LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV-LSLAWEHPFLTHM 68

Query: 257 FGT 259
           F T
Sbjct: 69  FCT 71

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQY 256
           +G GSF +VY+G  T+     A  E+  +       Q   + ++E  +L   +H NIV++
Sbjct: 17  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEMLKGLQHPNIVRF 73

Query: 257 FG 258
           + 
Sbjct: 74  YD 75

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 174 ELVYNFSLNEKYRRRIMSWQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGE 232
           + +  +    +   ++  + +   LG+GSFG V      + G  +A+K +  Q       
Sbjct: 25  DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKL 82

Query: 233 QSVLQLEQEISLLGQFEHDNIVQYFG 258
           + +     E  +L       +V+   
Sbjct: 83  KQIEHTLNEKRILQAVNFPFLVKLEF 108

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 3e-07
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +     LG G+FG V        G ++A+K +  +      +  V     E  +L    H
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRH 64

Query: 251 DNIVQYF 257
             +    
Sbjct: 65  PFLTALK 71

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 5e-07
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 8/65 (12%)

Query: 198 LGSGSFGSVYEGFTDD----GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
           +G G FG VY G   D        AVK ++           V Q   E  ++  F H N+
Sbjct: 35  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD----IGEVSQFLTEGIIMKDFSHPNV 90

Query: 254 VQYFG 258
           +   G
Sbjct: 91  LSLLG 95

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 6e-07
 Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 11/71 (15%)

Query: 195 GAPLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
           G  LG+G+FG V E        +D     AVK +               L  E+ +L   
Sbjct: 28  GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYL 83

Query: 249 E-HDNIVQYFG 258
             H NIV   G
Sbjct: 84  GNHMNIVNLLG 94

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 7e-07
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 9/67 (13%)

Query: 198 LGSGSFGSVYEGFTDDG-----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDN 252
           +G+G FG VY+G             A+K +         E+  +    E  ++GQF H N
Sbjct: 15  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT----EKQRVDFLGEAGIMGQFSHHN 70

Query: 253 IVQYFGT 259
           I++  G 
Sbjct: 71  IIRLEGV 77

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 1e-06
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 198 LGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
           LG GSFG VYEG        +     A+K V+         +  ++   E S++ +F   
Sbjct: 28  LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIEFLNEASVMKEFNCH 83

Query: 252 NIVQYFGT 259
           ++V+  G 
Sbjct: 84  HVVRLLGV 91

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (109), Expect = 1e-06
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 198 LGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNI 253
           +G+G FG V  G          F A+K +         E+       E S++GQF+H N+
Sbjct: 34  IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG----YTEKQRRDFLSEASIMGQFDHPNV 89

Query: 254 VQYF 257
           +   
Sbjct: 90  IHLE 93

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.4 bits (109), Expect = 1e-06
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++ G  +GSGSFG +Y G     G   A+K   ++ +         QL  E  +    + 
Sbjct: 9   YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP-------QLHIESKIYKMMQG 61

Query: 251 DNIVQYFG 258
              +    
Sbjct: 62  GVGIPTIR 69

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 4e-06
 Identities = 12/67 (17%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++K   LGSG+FG+VY+G    +G    +     + +     ++  ++  E  ++   ++
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 251 DNIVQYF 257
            ++ +  
Sbjct: 71  PHVCRLL 77

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 43.6 bits (102), Expect = 9e-06
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           ++ G  +G GSFG ++EG    +    A+K    +         +    +   LL     
Sbjct: 7   YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR----SDAPQLRDEYRTYKLLAGCTG 62

Query: 251 DNIVQYFGTEKVCI 264
              V YFG E +  
Sbjct: 63  IPNVYYFGQEGLHN 76

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 9e-06
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 198 LGSGSFGSVYEG-FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQ 255
           +G G+FG V +     DG         +++  ++ +        E+ +L +   H NI+ 
Sbjct: 18  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPNIIN 75

Query: 256 YFGT 259
             G 
Sbjct: 76  LLGA 79

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 43.7 bits (102), Expect = 1e-05
 Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 10/69 (14%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-E 249
           +Q    LG G +  V+E     +     VK +    +         ++++EI +L     
Sbjct: 37  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK--------KIKREIKILENLRG 88

Query: 250 HDNIVQYFG 258
             NI+    
Sbjct: 89  GPNIITLAD 97

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 11/71 (15%)

Query: 195 GAPLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF 248
           G  LGSG+FG V          T      AVK +  +            L  E+ ++ Q 
Sbjct: 42  GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREALMSELKMMTQL 97

Query: 249 E-HDNIVQYFG 258
             H+NIV   G
Sbjct: 98  GSHENIVNLLG 108

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 5/70 (7%)

Query: 192 WQKGAPLGSGSFGSVYEGF----TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ 247
           ++    LG+G++G V+        D G  +A+K +       Q  ++      E  +L  
Sbjct: 26  FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATI-VQKAKTTEHTRTERQVLEH 84

Query: 248 FEHDNIVQYF 257
                 +   
Sbjct: 85  IRQSPFLVTL 94

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (100), Expect = 2e-05
 Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH 250
           +     LG G F +V+      +    A+K V      T+        E EI LL +   
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE------AAEDEIKLLQRVND 68

Query: 251 DNIVQYFGTEKVCI 264
            +  +        I
Sbjct: 69  ADNTKEDSMGANHI 82

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.1 bits (98), Expect = 3e-05
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 198 LGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHD 251
           +G G+FG V++         +     AVK +  +             ++E +L+ +F++ 
Sbjct: 21  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS----ADMQADFQREAALMAEFDNP 76

Query: 252 NIVQYFGT 259
           NIV+  G 
Sbjct: 77  NIVKLLGV 84

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 192 WQKGAPLGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQ----EISLLG 246
           ++    LG G    V           +AVK + +   G+   + V +L +    E+ +L 
Sbjct: 5   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64

Query: 247 QF-EHDNIVQYFG 258
           +   H NI+Q   
Sbjct: 65  KVSGHPNIIQLKD 77

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 13/73 (17%)

Query: 195 GAPLGSGSFGSVYEG--------FTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLG 246
           G PLG G+FG V             +     AVK +         E+ +  L  E+ ++ 
Sbjct: 18  GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD----ATEKDLSDLISEMEMMK 73

Query: 247 QF-EHDNIVQYFG 258
              +H NI+   G
Sbjct: 74  MIGKHKNIINLLG 86

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 12/64 (18%)

Query: 198 LGSGSFGSVYEGF-TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ-FEHDNIVQ 255
           LG G  G V + F       FA+K +          Q   +  +E+ L  +  +  +IV+
Sbjct: 20  LGLGINGKVLQIFNKRTQEKFALKML----------QDCPKARREVELHWRASQCPHIVR 69

Query: 256 YFGT 259
               
Sbjct: 70  IVDV 73

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 9/73 (12%)

Query: 192 WQKGAPLGSGSFGSVYEGF------TDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLL 245
            + G PLG G+FG V E        T      AVK   L++  T  E   L  E +I L+
Sbjct: 15  LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKI-LI 71

Query: 246 GQFEHDNIVQYFG 258
               H N+V   G
Sbjct: 72  HIGHHLNVVNLLG 84

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.1 bits (85), Expect = 8e-04
 Identities = 9/83 (10%), Positives = 24/83 (28%), Gaps = 13/83 (15%)

Query: 195 GAPLGSGSFGSVYEGFTDDGFFFAVKEVSL-------------QDQGTQGEQSVLQLEQE 241
           G  +G G   +V+  +++      VK   +                      ++     E
Sbjct: 5   GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64

Query: 242 ISLLGQFEHDNIVQYFGTEKVCI 264
              L + +   + + +  E   +
Sbjct: 65  FRALQKLQGLAVPKVYAWEGNAV 87

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	264
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.31
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.29
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.28
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.28
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.26
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.25
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.24
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.24
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.23
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.22
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.22
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.21
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.21
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.21
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.2
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.2
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.19
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.19
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.19
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.19
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.18
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.18
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.18
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.18
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.17
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.17
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.17
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.16
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.16
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.16
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.13
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.13
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.13
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.13
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.12
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.12
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.11
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.1
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.09
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.09
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.09
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.09
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.06
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.05
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.04
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.02
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.02
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.99
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.98
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.96
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.95
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	98.94
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.94
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.93
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	98.84
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.82
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	98.77
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.72
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.7
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.65
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.61
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.33

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.2e-12  Score=110.63  Aligned_cols=67  Identities=22%  Similarity=0.277  Sum_probs=58.0

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|.+.+.||+|+||.||+|.+.++..||||.++...      .....+.+|+.++.+++|||||+++|+|.
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~------~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~   69 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS------MSEDEFIEEAKVMMNLSHEKLVQLYGVCT   69 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS------SCHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc------CCHHHHHHHHHHHHhcCCCceeeEEEEEe
Confidence            46789999999999999999999777789999998632      22457999999999999999999999853

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=7.4e-13  Score=113.64  Aligned_cols=66  Identities=27%  Similarity=0.422  Sum_probs=57.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||+++..      ....+.+.+|+.+|..++|||||+++|+|
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~------~~~~~~~~~E~~il~~l~HpnIv~~~~~~   82 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED------TMEVEEFLKEAAVMKEIKHPNLVQLLGVC   82 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT------CSCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc------cchHHHHHHHHHHHHhCCCCCEecCCccE
Confidence            45789999999999999999999 77899999999752      22346799999999999999999999985

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.9e-12  Score=108.88  Aligned_cols=69  Identities=26%  Similarity=0.401  Sum_probs=60.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|++.+.||+|+||.||+|.+ .+|..||||.+.....   .......+.+|+.+|.+++|||||++++++
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~~~~~~   72 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM---TEAEKQMLVSEVNLLRELKHPNIVRYYDRI   72 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS---CHHHHHHHHHHHHHTTSCCCTTBCCEEEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC---CHHHHHHHHHHHHHHHHCCCCCEeeEEEEE
Confidence            36799999999999999999999 7899999999986432   445567899999999999999999999975

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.3e-12  Score=108.95  Aligned_cols=67  Identities=22%  Similarity=0.248  Sum_probs=57.5

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|.+.+.||+|+||.||+|.+.++..||||.++..      ......+.+|+.+|.+++|||||+++|+|.
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~------~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~   70 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG------AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL   70 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS------SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC------cCcHHHHHHHHHHHHhcCCCCcccccceec
Confidence            4579999999999999999999966778999999752      222357999999999999999999999863

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.6e-12  Score=109.22  Aligned_cols=66  Identities=24%  Similarity=0.365  Sum_probs=57.0

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+.++..||||++...      ......+.+|+.+|.+++|||||+++|+|
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~HpnIv~~~g~~   77 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG------SMSPDAFLAEANLMKQLQHQRLVRLYAVV   77 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT------SSCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC------cCCHHHHHHHHHHHHhCCCCCEeEEEeee
Confidence            4578999999999999999999976788999999752      22345799999999999999999999985

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.25  E-value=5.5e-12  Score=109.28  Aligned_cols=68  Identities=26%  Similarity=0.442  Sum_probs=58.7

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .|...+.||+|+||.||+|.+ .+|..||||++.....  ........+.+|+.+|.+++|||||++++++
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~   84 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY   84 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSS--CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhc--cCHHHHHHHHHHHHHHHHCCCCCEeeEEEEE
Confidence            489999999999999999998 7889999999986432  2345567799999999999999999999984

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=7.6e-12  Score=107.31  Aligned_cols=72  Identities=24%  Similarity=0.358  Sum_probs=60.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCC-cChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGT-QGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~-~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||||++.+..... ........+.+|+.+|++++|||||++++++
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~   82 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY   82 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            35799999999999999999999 789999999998654321 1222357899999999999999999999984

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=3.7e-12  Score=109.49  Aligned_cols=69  Identities=30%  Similarity=0.462  Sum_probs=56.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||++.....   .......+.+|+.+|+.++|||||++++++
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~   70 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE---TEGVPSTAIREISLLKELNHPNIVKLLDVI   70 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc---ChHHHHHHHHHHHHHHhCCCCcEEEecccc
Confidence            36899999999999999999999 7899999999975321   223356789999999999999999999984

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=5.7e-12  Score=107.20  Aligned_cols=68  Identities=24%  Similarity=0.456  Sum_probs=56.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|++.+.||+|+||.||+|.+ .+|..||||++....    .......+.+|+.+|+.++|||||++++++
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~----~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~   72 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----AVDCPENIKKEICINKMLNHENVVKFYGHR   72 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhh----cchHHHHHHHHHHHHHhCCCCCEeeEeeee
Confidence            56899999999999999999999 789999999998632    222345689999999999999999999984

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=5.9e-12  Score=107.99  Aligned_cols=66  Identities=27%  Similarity=0.475  Sum_probs=57.7

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +.|.+.+.||+|+||.||+|.+ .+|..||||.+...     .....+.+.+|+.+|+.++|||||++++++
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~-----~~~~~~~~~~E~~il~~l~HpnIv~l~~~~   78 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK-----SEEELEDYMVEIDILASCDHPNIVKLLDAF   78 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----SSGGGGGTHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcC-----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            4689999999999999999999 78999999999863     233456789999999999999999999984

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=5.2e-12  Score=109.86  Aligned_cols=69  Identities=23%  Similarity=0.296  Sum_probs=59.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|+..+.||+|+||.||+|.+ .+|..||+|.++...    .......+.+|+.+|+.++|||||++++++.
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~----~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~   74 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFY   74 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC----CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            56899999999999999999999 789999999998632    3344568899999999999999999999853

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1e-11  Score=108.05  Aligned_cols=66  Identities=23%  Similarity=0.297  Sum_probs=57.8

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||.++.      .......+.+|+.+|..++|||||++++++
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~------~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~   70 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV------KGTDQVLVKKEISILNIARHRNILHLHESF   70 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC------CTHHHHHHHHHHHHHHHSCCTTBCCEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcC------CcccHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            57899999999999999999999 7889999999986      223345688999999999999999999973

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1.2e-11  Score=105.55  Aligned_cols=69  Identities=26%  Similarity=0.458  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCC----CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDG----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g----~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      +++|...++||+|+||.||+|.+ .++    ..||||.+...    ........|.+|+.+|.+++|||||+++|+|.
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~----~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~   79 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG----YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS   79 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc----cChHHHHHHHHHHHHHHhcCCCCEeeeeEEEe
Confidence            46789999999999999999998 332    36999999752    24455667999999999999999999999853

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1.6e-11  Score=104.21  Aligned_cols=66  Identities=23%  Similarity=0.404  Sum_probs=56.5

Q ss_pred             eeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          192 WQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       192 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      |.....||+|+||.||+|.+ .++..||+|.+.....   .......+.+|+.+|++++|||||++++++
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~~~~~~   77 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSW   77 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence            46677899999999999999 7889999999986432   345567899999999999999999999985

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.20  E-value=8.4e-12  Score=106.42  Aligned_cols=68  Identities=28%  Similarity=0.488  Sum_probs=58.5

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ++|...+.||+|+||.||+|.+.+|..||||++.....   .......+.+|+.+|++++|||||++++++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~   69 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVKLYDVI   69 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG---GGCCCHHHHHHHHGGGGCCCTTBCCEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhc---ChHHHHHHHHHHHHHHhCCCCcEEeeeeec
Confidence            67999999999999999999987789999999976322   233356789999999999999999999884

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=2e-11  Score=103.94  Aligned_cols=69  Identities=28%  Similarity=0.452  Sum_probs=60.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ++|...+.||+|+||+||+|.+ .+|..||||+++....   .......+.+|+.+|+.++|||||++++++.
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   71 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD---DEGVPSSALREICLLKELKHKNIVRLHDVLH   71 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS---STTHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC---ChHHHHHHHHHHHHHHhcCcCCEEeeccccc
Confidence            5799999999999999999999 7899999999986432   3455678999999999999999999998843

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.4e-11  Score=106.87  Aligned_cols=68  Identities=24%  Similarity=0.419  Sum_probs=53.7

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCC----eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGF----FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|...+.||+|+||.||+|.+ .+|.    .||+|.+...    ......+.+.+|+.+|++++|||||+++|+|.
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~   81 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----TSPKANKEILDEAYVMASVDNPHVCRLLGICL   81 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC--------CTHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc----cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            4699999999999999999998 5554    5888888642    23345678999999999999999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.19  E-value=1.7e-11  Score=107.89  Aligned_cols=67  Identities=24%  Similarity=0.302  Sum_probs=59.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++...     .......+.+|+.+|..++|||||++++++
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~-----~~~~~~~~~~E~~il~~l~HpnIv~~~~~~   92 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP-----HESDKETVRKEIQTMSVLRHPTLVNLHDAF   92 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCC-----SHHHHHHHHHHHHHHHHTCCTTBCCEEEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEccc-----chhhHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            56899999999999999999999 78999999999752     344567789999999999999999999984

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.19  E-value=2.7e-11  Score=102.84  Aligned_cols=70  Identities=20%  Similarity=0.160  Sum_probs=60.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++.....  ........+.+|+.+|+.++|||||++++++
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~   76 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLA--RDPSFYLRFRREAQNAAALNHPAIVAVYDTG   76 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTT--TCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhc--cCHHHHHHHHHHHHHHHhcCCCCCCccccee
Confidence            45799999999999999999999 7899999999986432  2455567899999999999999999999874

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1.4e-11  Score=105.97  Aligned_cols=66  Identities=24%  Similarity=0.419  Sum_probs=57.4

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..|...+.||+|+||.||+|.+ .+|..||||.+.....     ...+.+.+|+.+|+.++|||||++++++
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~il~~l~HpnIv~~~~~~   86 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-----PKKELIINEILVMRENKNPNIVNYLDSY   86 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGC-----SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccC-----hHHHHHHHHHHHHHhCCCCCEeeEeEEE
Confidence            4689999999999999999998 7899999999986332     2346789999999999999999999984

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.19  E-value=1.8e-11  Score=107.91  Aligned_cols=67  Identities=22%  Similarity=0.320  Sum_probs=58.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||||++...     .......+.+|+.+|+.++|||||++++++
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~   95 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-----YPLDKYTVKNEISIMNQLHHPKLINLHDAF   95 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----SHHHHHHHHHHHHHHTTCCSTTBCCEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCc-----chhHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            46799999999999999999999 78999999999862     334456788999999999999999999983

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=2.2e-11  Score=104.21  Aligned_cols=68  Identities=22%  Similarity=0.327  Sum_probs=55.4

Q ss_pred             CCeeeccc-ccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAP-LGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~-lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ++|...+. ||+|+||.||+|.+   ..+..||||.+...    ........|.+|+.+|.+++|||||+++|+|.
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~----~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~   79 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ   79 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh----cCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec
Confidence            45677774 99999999999987   34557999999752    24556678999999999999999999999853

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=7e-12  Score=107.55  Aligned_cols=70  Identities=21%  Similarity=0.259  Sum_probs=58.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++.....  ........+.+|+.+|++++|||||++++++
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~   77 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFVKLYFTF   77 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHc--cCHHHHHHHHHHHHHHHHcCCCCeeEEEEEE
Confidence            36799999999999999999999 7899999999975321  1223356789999999999999999999984

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1e-11  Score=105.13  Aligned_cols=70  Identities=27%  Similarity=0.502  Sum_probs=58.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||+|++.....  ........+.+|+.+|..++|||||++++++
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~   75 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPNILRLYGYF   75 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHc--cChHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            56899999999999999999999 7899999999975221  1123356789999999999999999999984

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1.2e-11  Score=105.88  Aligned_cols=66  Identities=24%  Similarity=0.339  Sum_probs=56.5

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+..+..||||++....      .....|.+|+.+|.+++|||||+++|+|
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~------~~~~~~~~E~~~l~~l~h~nIv~~~g~~   81 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT------MSPEAFLQEAQVMKKLRHEKLVQLYAVV   81 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS------SCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc------CCHHHHHHHHHHHHhcccCCEeEEEEEE
Confidence            35799999999999999999998555689999997522      2236799999999999999999999985

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.2e-11  Score=104.69  Aligned_cols=64  Identities=28%  Similarity=0.371  Sum_probs=55.1

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .|..||||+++..       ...+.+.+|+.+|++++|||||+++|+|
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~-------~~~~~~~~E~~~l~~l~HpnIv~~~g~~   69 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND-------ATAQAFLAEASVMTQLRHSNLVQLLGVI   69 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC-------C--HHHHHTHHHHTTCCCTTBCCEEEEE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH-------HHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            45789999999999999999998 5789999999742       2235789999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=2.6e-11  Score=106.71  Aligned_cols=69  Identities=23%  Similarity=0.306  Sum_probs=58.4

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||+||+|.+ .+|..||||++....   ........+.+|+.+|+.++|||||++++++
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~---~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f   85 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIISLLNVF   85 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTT---SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhh---cCHHHHHHHHHHHHHHHhcCCCCeeEEEEEE
Confidence            36799999999999999999999 789999999998632   2455667899999999999999999999885

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=2.2e-11  Score=104.86  Aligned_cols=68  Identities=29%  Similarity=0.465  Sum_probs=55.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCC---eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGF---FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~---~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|.   .||||.+...    ......+.|.+|+.+|++++|||||+++|+|
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~   96 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG----YTEKQRRDFLSEASIMGQFDHPNVIHLEGVV   96 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc----cCHHHHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence            35688999999999999999998 4433   5889988642    2455667899999999999999999999985

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.16  E-value=1.2e-11  Score=107.01  Aligned_cols=68  Identities=24%  Similarity=0.243  Sum_probs=53.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|.+.+.||+|+||.||+|.+ .+|..||||++.....    ......+.+|+.+|..++|||||++++++
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~   76 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL----EGKEGSMENEIAVLHKIKHPNIVALDDIY   76 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC--------------CHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHh----hhHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            35699999999999999999999 7899999999986332    22335688999999999999999999984

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=2.3e-11  Score=106.45  Aligned_cols=69  Identities=23%  Similarity=0.364  Sum_probs=54.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .+.|...+.||+|+||.||+|.+ .+|..||||++....   ........+.+|+.+|+.++|||||++++++
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~   86 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF---QSELFAKRAYRELRLLKHMRHENVIGLLDVF   86 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT---SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEE
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh---cChHHHHHHHHHHHHHHhcCCCCeeEEEEEe
Confidence            56899999999999999999999 789999999997532   2455667899999999999999999999885

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=9.9e-12  Score=107.95  Aligned_cols=70  Identities=26%  Similarity=0.327  Sum_probs=59.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++.....  ........+.+|+.+|+.++|||||++++++
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~   73 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV--VRLKQVEHTNDERLMLSIVTHPFIIRMWGTF   73 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHc--cCHHHHHHHHHHHHHHHhccCcChhheeeeE
Confidence            46799999999999999999999 7899999999975321  1223456789999999999999999999984

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=4.3e-11  Score=104.84  Aligned_cols=69  Identities=20%  Similarity=0.310  Sum_probs=57.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+.|...+.||+|+||+||+|.+ .+|..||||++...    ........+.+|+.+|..++|||||++++++.
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~----~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~   76 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF----EHQTYCQRTLREIKILLRFRHENIIGINDIIR   76 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCT----TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEEC
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehh----cChHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence            45799999999999999999998 78999999999752    24555678999999999999999999999863

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.9e-11  Score=104.92  Aligned_cols=67  Identities=25%  Similarity=0.373  Sum_probs=50.0

Q ss_pred             ecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          194 KGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       194 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      ..++||+|+||+||+|.+ .+|..||||++...............+.+|+.+|..++|||||++++++
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~   69 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF   69 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeee
Confidence            357899999999999999 7899999999976432211222235688999999999999999999984

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2e-11  Score=107.00  Aligned_cols=70  Identities=19%  Similarity=0.177  Sum_probs=59.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++.+...  ........+.+|+.+|+.++|||||++++++
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~--~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~   74 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTALKYAF   74 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEeee
Confidence            56899999999999999999999 8899999999985321  1223456789999999999999999999984

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=3.4e-11  Score=102.51  Aligned_cols=63  Identities=27%  Similarity=0.345  Sum_probs=50.1

Q ss_pred             ccccccCceeEEEEEe---cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          196 APLGSGSFGSVYEGFT---DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       196 ~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      +.||+|+||.||+|.+   ..+..||||.+....   ........+.+|+.+|.+++|||||+++|+|.
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~   78 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAEANVMQQLDNPYIVRMIGICE   78 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh---CCHHHHHHHHHHHHHHHhCCCCCCceEEEEec
Confidence            5799999999999987   345689999997532   23445678999999999999999999999863

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=4.2e-11  Score=101.94  Aligned_cols=67  Identities=30%  Similarity=0.419  Sum_probs=56.6

Q ss_pred             cCCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+.  ..||||+++....   .......|.+|+.+|.+++|||||+++|+|
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~   73 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP---TPQQLQAFKNEVGVLRKTRHVNILLFMGYS   73 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSC---CTTHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeeeEEE
Confidence            457889999999999999999862  3599999976432   345567899999999999999999999984

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=4.5e-11  Score=104.45  Aligned_cols=69  Identities=29%  Similarity=0.442  Sum_probs=60.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +++|...+.||+|+||+||+|.+ .+|..||||++....   ........+.+|+.+|..++|||||++++++
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~   86 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKHENVIGLLDVF   86 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT---SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh---cChHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            56799999999999999999998 789999999998532   2445567789999999999999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=5.5e-11  Score=100.73  Aligned_cols=68  Identities=25%  Similarity=0.361  Sum_probs=56.2

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC---CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+   +..||||.+...    ........+.+|+.+|+.++|||||+++|++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~   77 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----TSDSVREKFLQEALTMRQFDHPHIVKLIGVI   77 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT----TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc----cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            35789999999999999999988 22   346888888642    2455567899999999999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=3.6e-11  Score=102.11  Aligned_cols=70  Identities=23%  Similarity=0.337  Sum_probs=49.3

Q ss_pred             CCeeecccccccCceeEEEEEe--cCC--CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT--DDG--FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~--~~g--~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|.+.+.||+|+||.||+|.+  ..+  ..||||++.....  ........|.+|+.+|..++|||||+++|+|.
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~--~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~   81 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL   81 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhc--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            5689999999999999999987  333  3689999876432  23455678999999999999999999999853

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=3.6e-11  Score=105.81  Aligned_cols=70  Identities=20%  Similarity=0.206  Sum_probs=58.7

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|...+.||+|+||.||+|.+ .+|..||||++.....  ........+.+|+.+|+.++|||||++++++
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~  110 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAVNFPFLVKLEFSF  110 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHc--cCHHHHHHHHHHHHHHHHcCCCcEeeccccc
Confidence            46799999999999999999999 7899999999975221  1223356789999999999999999999874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.09  E-value=6.6e-11  Score=101.70  Aligned_cols=69  Identities=22%  Similarity=0.355  Sum_probs=58.3

Q ss_pred             cCCeeecccccccCceeEEEEEec------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTD------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|++.+.||+|+||.||+|.+.      ++..||||.+...    ........+.+|+.+|++++||||++++++|.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~----~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE----ASADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh----cChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            467999999999999999999872      3568999999752    24455678999999999999999999999863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=4.5e-11  Score=103.22  Aligned_cols=69  Identities=26%  Similarity=0.458  Sum_probs=57.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||+||+|.+ .+|..||||++.....   .......+.+|+.+|..++||||+++++++
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~E~~il~~l~h~nii~~~~~~   78 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---KEGFPITALREIKILQLLKHENVVNLIEIC   78 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C---TTSSCHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc---chHHHHHHHHHHHHHHHhcCCCccceEeee
Confidence            57899999999999999999999 7899999999876432   233446788999999999999999999875

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.09  E-value=1.1e-10  Score=99.32  Aligned_cols=72  Identities=21%  Similarity=0.228  Sum_probs=59.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcC----hHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQG----EQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~----~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      .++|++.+.||+|+||+||+|.+ .+|..||||++.........    ......+.+|+.+|.+++ |||||++++++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~   79 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   79 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeec
Confidence            46899999999999999999999 78999999999875432212    123456889999999997 99999999984

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.2e-10  Score=100.60  Aligned_cols=64  Identities=28%  Similarity=0.417  Sum_probs=52.5

Q ss_pred             ecccccccCceeEEEEEe-cC---CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          194 KGAPLGSGSFGSVYEGFT-DD---GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       194 ~~~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      ..++||+|+||+||+|.+ .+   ...||||.++..    ........|.+|+.+|++++|||||+++|+|.
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~   98 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL   98 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCC----CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc----cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEE
Confidence            357899999999999998 32   236899999742    25566788999999999999999999999863

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=8.8e-11  Score=101.32  Aligned_cols=69  Identities=22%  Similarity=0.360  Sum_probs=53.6

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCC--eEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGF--FFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~--~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~~  261 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|.  .||||.+....    .....+.+.+|+.+|.++ +|||||+++|+|.
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~   81 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACE   81 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEE
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc----ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEe
Confidence            36789999999999999999998 5655  47788876421    233456799999999998 7999999999864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=7.6e-11  Score=101.73  Aligned_cols=69  Identities=26%  Similarity=0.411  Sum_probs=57.6

Q ss_pred             cCCeeecccccccCceeEEEEEec------CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFTD------DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .++|...+.||+|+||.||+|.+.      .+..||||.++..    ........+.+|+.+|.+++|||||+++|+|.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~----~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA----ASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT----SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc----cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            467899999999999999999871      2568999999752    24455667999999999999999999999853

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1.6e-10  Score=99.65  Aligned_cols=69  Identities=29%  Similarity=0.363  Sum_probs=57.6

Q ss_pred             cCCeeecccccccCceeEEEEEe------cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT------DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTEK  261 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~~  261 (264)
                      .++|.+.+.||+|+||.||+|.+      ..+..||||.++...    .......+.+|+.++..+ +|||||+++|+|.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~----~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~   97 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA----HLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc----CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe
Confidence            46789999999999999999986      245689999998532    345566899999999999 6999999999863

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=9.9e-11  Score=101.66  Aligned_cols=70  Identities=27%  Similarity=0.311  Sum_probs=55.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHh-cCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLG-QFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~-~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++.+...  ........+..|+.++. .++|||||++++++
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~   72 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV--LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF   72 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhc--cChHHHHHHHHHHHHHHHhCCCCcEEEEEEEE
Confidence            36899999999999999999999 7899999999975221  01223456778887765 68999999999983

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.99  E-value=2.4e-10  Score=99.08  Aligned_cols=64  Identities=20%  Similarity=0.285  Sum_probs=55.9

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-CCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-HDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++...        ....+.+|+.+|..+. ||||+++++++
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~--------~~~~~~~Ei~il~~l~~hpnIv~~~~~~   99 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--------KKKKIKREIKILENLRGGPNIITLADIV   99 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS--------CHHHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH--------HHHHHHHHHHHHHhccCCCCCcEEEEEE
Confidence            35799999999999999999999 78999999999752        1356889999999995 99999999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.8e-10  Score=100.95  Aligned_cols=61  Identities=30%  Similarity=0.459  Sum_probs=53.1

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      +|...++||+|+||+||+|.+ .+|..||||++.....         ...+|+.+|++++|||||++++++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---------~~~~Ei~il~~l~h~niv~~~~~~   82 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---------FKNRELQIMRKLDHCNIVRLRYFF   82 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---------SCCHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---------HHHHHHHHHHhcCCCCCCcEEEEE
Confidence            588899999999999999999 7899999999986321         124799999999999999999886

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=2.1e-10  Score=98.27  Aligned_cols=69  Identities=29%  Similarity=0.492  Sum_probs=53.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC-CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC---CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD-GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF---EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~-g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+ +..||||.+......   ......+.+|+.+|+.|   +|||||++++++
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~   79 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE---EGMPLSTIREVAVLRHLETFEHPNVVRLFDVC   79 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT---TSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc---chHHHHHHHHHHHHHHHhhcCCCCcceeeeee
Confidence            46899999999999999999998 44 567999999764321   11223456777777655   899999999886

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3.9e-10  Score=96.97  Aligned_cols=65  Identities=28%  Similarity=0.341  Sum_probs=49.7

Q ss_pred             CCeeecccccccCceeEEEEEecCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGTEK  261 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~~  261 (264)
                      .+|.+.+.||+|+||.||+|.+ .|..||||++..      ..........|+..+..++|||||+++|+|.
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~------~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~   67 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS------REERSWFREAEIYQTVMLRHENILGFIAADN   67 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECG------GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECc------cchhHHHHHHHHHHHhhCCCCcCcceEEEEE
Confidence            4578889999999999999997 688999999974      2222222334555556789999999999964

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.94  E-value=3.7e-10  Score=99.66  Aligned_cols=72  Identities=25%  Similarity=0.270  Sum_probs=54.1

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCC-cChHHHHHHHHHHHHHhcCCCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGT-QGEQSVLQLEQEISLLGQFEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~-~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .+|..||||++....... ...........|+.+++.++|||||++++++
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~   76 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF   76 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEE
Confidence            57899999999999999999999 789999999997522100 0111122233457788888999999999984

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.3e-10  Score=98.42  Aligned_cols=71  Identities=27%  Similarity=0.404  Sum_probs=56.2

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCc-ChHHHHHHHHHHHHHhcCC--CCCceeeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQ-GEQSVLQLEQEISLLGQFE--HDNIVQYFGTE  260 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~-~~~~~~~~~~Ei~iL~~l~--HpNIV~l~g~~  260 (264)
                      ++|.+.+.||+|+||.||+|.+ .+|..||||.+........ .......+.+|+.+|+.++  |||||++++++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~   78 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF   78 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEE
Confidence            5799999999999999999999 7899999999986432110 1111234678999999986  99999999984

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=4.9e-10  Score=97.20  Aligned_cols=68  Identities=28%  Similarity=0.388  Sum_probs=53.0

Q ss_pred             cCCeeecccccccCceeEEEEEe-cCC-----CeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DDG-----FFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~g-----~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ ..+     ..||+|.+....    .......+.+|+.+|.++ +|||||+++|++
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~  110 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA----DSSEREALMSELKMMTQLGSHENIVNLLGAC  110 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc----CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE
Confidence            35789999999999999999997 332     268999987522    233446789999999998 899999999985

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.5e-09  Score=92.89  Aligned_cols=69  Identities=26%  Similarity=0.343  Sum_probs=51.3

Q ss_pred             cCCeeecccccccCceeEEEEEe-cC-------CCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-DD-------GFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGT  259 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~~-------g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~  259 (264)
                      .++|.+.+.||+|+||.||+|.+ ..       +..||||.+...    ........+.+|+..+.++ +|||||+++|+
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~----~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~   87 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD----ATEKDLSDLISEMEMMKMIGKHKNIINLLGA   87 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcc----cChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence            46789999999999999999986 22       247999999752    2445567899999999888 79999999998


Q ss_pred             ee
Q 024683          260 EK  261 (264)
Q Consensus       260 ~~  261 (264)
                      |.
T Consensus        88 ~~   89 (299)
T d1fgka_          88 CT   89 (299)
T ss_dssp             EC
T ss_pred             cc
Confidence            53

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=2.7e-09  Score=92.98  Aligned_cols=62  Identities=23%  Similarity=0.203  Sum_probs=51.7

Q ss_pred             cCCeeec-ccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhc-CCCCCceeeeeee
Q 024683          189 IMSWQKG-APLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQ-FEHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~-~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIV~l~g~~  260 (264)
                      .++|.+. +.||+|+||.||+|.+ .+|..||||+++.      .    ..+.+|+.++.+ ++|||||++++++
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~------~----~~~~~E~~~~~~~~~hpnIv~l~~~~   74 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------C----PKARREVELHWRASQCPHIVRIVDVY   74 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC------S----HHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC------c----HHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            5678876 4699999999999999 7899999999974      1    356789998754 5899999999874

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=5.3e-10  Score=96.97  Aligned_cols=71  Identities=20%  Similarity=0.248  Sum_probs=55.6

Q ss_pred             cCCeeecccccccCceeEEEEEe----cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCC-CCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT----DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH-DNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~H-pNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|..    .+|..||||.++..... ........+.+|+.+|.+++| |||+++++++
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~   98 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV-QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF   98 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE-EEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhc-cchHHHHHHHHHHHHHHhccCCCeEEEeeeee
Confidence            47799999999999999999986    35789999998753211 011223567899999999976 8999998873

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.72  E-value=4e-09  Score=89.91  Aligned_cols=63  Identities=24%  Similarity=0.303  Sum_probs=51.8

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      +.|.+.+.||+|+||.||+|.+ .+|..||||.+.....       ...+..|+.++..++|+|+|.+++.
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~~~~E~~i~~~l~~~~~i~~~~~   70 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------HPQLHIESKIYKMMQGGVGIPTIRW   70 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-------SCCHHHHHHHHHHSTTSTTCCCEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-------CHHHHHHHHHHHHccCCCcccEEEE
Confidence            4699999999999999999999 7889999999886321       1247889999999988877666554

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.70  E-value=8.5e-09  Score=89.84  Aligned_cols=64  Identities=22%  Similarity=0.230  Sum_probs=53.5

Q ss_pred             CeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCC-----------CCCceeeee
Q 024683          191 SWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFE-----------HDNIVQYFG  258 (264)
Q Consensus       191 ~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~-----------HpNIV~l~g  258 (264)
                      .|.+.+.||+|+||+||+|.+ .+|..||||+++.      .......+.+|+.+|..++           |||||++++
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~------~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~   87 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG------DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   87 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEec------cccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEE
Confidence            499999999999999999999 7899999999985      3344567788999888775           477888877


Q ss_pred             ee
Q 024683          259 TE  260 (264)
Q Consensus       259 ~~  260 (264)
                      ++
T Consensus        88 ~~   89 (362)
T d1q8ya_          88 HF   89 (362)
T ss_dssp             EE
T ss_pred             Ee
Confidence            64

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=1.5e-08  Score=86.33  Aligned_cols=68  Identities=28%  Similarity=0.332  Sum_probs=52.5

Q ss_pred             cCCeeecccccccCceeEEEEEe-c-----CCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcC-CCCCceeeeeee
Q 024683          189 IMSWQKGAPLGSGSFGSVYEGFT-D-----DGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQF-EHDNIVQYFGTE  260 (264)
Q Consensus       189 ~~~~~~~~~lG~G~fG~Vy~~~~-~-----~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIV~l~g~~  260 (264)
                      .++|.+.+.||+|+||.||+|.+ .     ++..||||.+...    ........+.+|+.++.++ +|||||.+++++
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~   86 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRALMSELKILIHIGHHLNVVNLLGAC   86 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC--------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccc----cCcHHHHHHHHHHHHHHhhcCCCeEEEeeeee
Confidence            36799999999999999999987 2     3457999999752    2344566788888888776 689999999874

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.61  E-value=1.6e-08  Score=86.04  Aligned_cols=63  Identities=22%  Similarity=0.328  Sum_probs=52.1

Q ss_pred             CCeeecccccccCceeEEEEEe-cCCCeEEEEEeecCCCCCcChHHHHHHHHHHHHHhcCCC-CCceeeeee
Q 024683          190 MSWQKGAPLGSGSFGSVYEGFT-DDGFFFAVKEVSLQDQGTQGEQSVLQLEQEISLLGQFEH-DNIVQYFGT  259 (264)
Q Consensus       190 ~~~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~~~~~Ei~iL~~l~H-pNIV~l~g~  259 (264)
                      .+|.+.+.||+|+||.||+|.+ .+|..||||++.....       ...+.+|+.++..+.| +||+.++++
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~   69 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYF   69 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-------cHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            5799999999999999999999 7889999999875321       1246788899998875 899888876

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.33  E-value=4.8e-07  Score=71.63  Aligned_cols=68  Identities=13%  Similarity=0.156  Sum_probs=49.5

Q ss_pred             eecccccccCceeEEEEEecCCCeEEEEEeecCCCCC---c----------ChHHHHHHHHHHHHHhcCCCCCceeeeee
Q 024683          193 QKGAPLGSGSFGSVYEGFTDDGFFFAVKEVSLQDQGT---Q----------GEQSVLQLEQEISLLGQFEHDNIVQYFGT  259 (264)
Q Consensus       193 ~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~----------~~~~~~~~~~Ei~iL~~l~HpNIV~l~g~  259 (264)
                      .+++.||+|+||.||+|.+.+|..||||+++......   .          ..........|...|..+.|++++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            5688999999999999998778899999876432100   0          01112345678899999999999988766


Q ss_pred             e
Q 024683          260 E  260 (264)
Q Consensus       260 ~  260 (264)
                      .
T Consensus        83 ~   83 (191)
T d1zara2          83 E   83 (191)
T ss_dssp             E
T ss_pred             c
Confidence            3