Query 024687
Match_columns 264
No_of_seqs 188 out of 1317
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 06:36:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024687.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024687hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 5.8E-50 1.3E-54 342.6 18.2 208 35-261 4-212 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 3.1E-48 6.7E-53 343.4 20.5 210 36-262 48-260 (296)
3 KOG0224 Aquaporin (major intri 100.0 7.4E-49 1.6E-53 338.2 13.2 214 38-263 28-260 (316)
4 PF00230 MIP: Major intrinsic 100.0 2.7E-47 5.8E-52 328.6 16.2 219 35-262 1-219 (227)
5 PTZ00016 aquaglyceroporin; Pro 100.0 2.6E-46 5.7E-51 331.9 22.1 211 38-261 46-276 (294)
6 COG0580 GlpF Glycerol uptake f 100.0 1.2E-46 2.7E-51 321.2 18.4 211 40-261 3-226 (241)
7 PRK05420 aquaporin Z; Provisio 100.0 2.5E-45 5.4E-50 316.0 20.9 206 42-262 2-215 (231)
8 PLN00167 aquaporin TIP5; Provi 100.0 2.5E-44 5.3E-49 313.5 22.5 214 34-262 14-227 (256)
9 PLN00166 aquaporin TIP2; Provi 100.0 1.3E-44 2.9E-49 314.3 20.0 212 36-261 12-223 (250)
10 PLN00182 putative aquaporin NI 100.0 4.4E-44 9.6E-49 315.1 20.0 204 38-262 38-241 (283)
11 PLN00027 aquaporin TIP; Provis 100.0 3.2E-44 7E-49 312.9 18.7 213 35-262 13-226 (252)
12 PLN00026 aquaporin NIP; Provi 100.0 9.4E-44 2E-48 314.2 18.7 203 38-262 67-269 (298)
13 cd00333 MIP Major intrinsic pr 100.0 1.9E-41 4.2E-46 292.2 19.0 209 43-262 1-217 (228)
14 PLN00183 putative aquaporin NI 100.0 1.9E-41 4.1E-46 297.4 18.2 202 38-261 41-242 (274)
15 TIGR00861 MIP MIP family chann 100.0 4.6E-40 1E-44 281.5 16.6 208 47-262 1-208 (216)
16 PLN00182 putative aquaporin NI 99.6 1.2E-15 2.7E-20 134.8 9.9 98 40-152 157-254 (283)
17 cd00333 MIP Major intrinsic pr 99.6 3.3E-15 7.1E-20 128.9 9.8 99 39-149 127-227 (228)
18 PLN00026 aquaporin NIP; Provi 99.6 3.5E-15 7.5E-20 132.5 8.8 98 40-152 185-282 (298)
19 PLN00183 putative aquaporin NI 99.6 5.4E-15 1.2E-19 130.2 9.3 99 41-154 160-258 (274)
20 TIGR00861 MIP MIP family chann 99.5 4.9E-14 1.1E-18 120.7 8.1 96 39-146 119-215 (216)
21 PLN00184 aquaporin NIP1; Provi 99.4 6.5E-13 1.4E-17 118.2 9.9 98 40-152 176-273 (296)
22 KOG0223 Aquaporin (major intri 99.4 1.2E-13 2.6E-18 118.8 4.4 100 39-154 129-228 (238)
23 PLN00166 aquaporin TIP2; Provi 99.4 3.4E-12 7.5E-17 111.3 10.6 104 39-155 137-240 (250)
24 PRK05420 aquaporin Z; Provisio 99.3 7.3E-12 1.6E-16 108.1 9.4 100 39-153 129-229 (231)
25 PLN00027 aquaporin TIP; Provis 99.3 1.9E-11 4.2E-16 106.8 10.8 101 40-153 140-240 (252)
26 PTZ00016 aquaglyceroporin; Pro 99.3 1.7E-11 3.7E-16 109.3 9.0 103 39-154 181-292 (294)
27 PLN00167 aquaporin TIP5; Provi 99.2 7E-11 1.5E-15 103.4 8.6 101 40-154 142-242 (256)
28 COG0580 GlpF Glycerol uptake f 99.2 1.6E-10 3.5E-15 99.4 9.3 99 39-151 133-239 (241)
29 PF00230 MIP: Major intrinsic 99.1 4E-10 8.8E-15 97.0 11.0 96 39-147 132-227 (227)
30 KOG0224 Aquaporin (major intri 97.8 2.1E-05 4.6E-10 69.2 3.9 103 38-153 164-276 (316)
31 PF01226 Form_Nir_trans: Forma 71.8 68 0.0015 28.0 12.3 112 82-195 55-174 (250)
32 PRK10805 formate transporter; 61.5 1.2E+02 0.0026 27.1 12.9 105 84-192 68-182 (285)
33 TIGR02762 TraL_TIGR type IV co 44.4 2.4 5.1E-05 31.4 -2.7 21 241-261 59-79 (95)
34 PF03033 Glyco_transf_28: Glyc 41.9 8.2 0.00018 29.6 -0.1 20 104-123 6-25 (139)
35 COG2116 FocA Formate/nitrite f 39.6 2.7E+02 0.0059 24.6 16.1 109 83-193 63-180 (265)
36 PHA02885 putative interleukin 39.5 17 0.00037 27.3 1.3 21 240-260 49-69 (135)
37 TIGR00790 fnt formate/nitrite 37.4 2.7E+02 0.0059 24.0 12.1 81 111-191 68-157 (239)
38 PRK12446 undecaprenyldiphospho 35.4 8.2 0.00018 35.3 -1.2 22 101-122 6-27 (352)
39 PF12811 BaxI_1: Bax inhibitor 31.5 3.8E+02 0.0081 23.9 13.6 43 108-150 109-163 (274)
40 COG0730 Predicted permeases [G 31.4 3.3E+02 0.0073 23.3 8.4 33 119-151 66-98 (258)
41 PF03842 Silic_transp: Silicon 27.6 4.2E+02 0.0091 25.2 8.4 108 89-197 139-250 (512)
42 PF09512 ThiW: Thiamine-precur 24.4 2.6E+02 0.0057 22.5 5.8 25 126-150 123-147 (150)
43 KOG4647 Uncharacterized membra 23.5 2.3E+02 0.005 24.4 5.5 29 30-58 83-111 (263)
44 TIGR00811 sit silicon transpor 21.7 4.8E+02 0.01 25.2 7.7 60 91-151 140-199 (545)
45 PRK09979 putative rho operon l 20.2 38 0.00083 19.1 0.2 17 225-241 5-21 (33)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-50 Score=342.61 Aligned_cols=208 Identities=52% Similarity=0.807 Sum_probs=188.1
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhh
Q 024687 35 ELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAV 114 (264)
Q Consensus 35 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPav 114 (264)
+...++.+|++++||++|++++|++|+++...... ....+.+.+++++|+.+++.+++++++||||+||||
T Consensus 4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~---------~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAV 74 (238)
T KOG0223|consen 4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKY---------GGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAV 74 (238)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---------CCCchhHHHHHHHHHHHHHHHhhhccccccccCHHH
Confidence 45678999999999999999999999988765531 133467889999999999999999999999999999
Q ss_pred HHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHH-hc
Q 024687 115 TFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-AT 193 (264)
Q Consensus 115 Tla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~-~~ 193 (264)
|+++++.|++++.++..|+++|++|+++|+++++.+.+.+.+..+...+.+.++.+..|+++.|++.||+|+++++. ..
T Consensus 75 T~a~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~ 154 (238)
T KOG0223|consen 75 TLAFAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATAT 154 (238)
T ss_pred HHHHHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEee
Confidence 99999999999999999999999999999999999998864455556677889999999999999999999999998 77
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeeccc
Q 024687 194 DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTI 261 (264)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~ 261 (264)
|+|++ .+.|+.||+++.+.+++.+++||++|||||+|||+++++ .|++|||||++|++
T Consensus 155 d~~~~-------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hwiYwvgP~~ 212 (238)
T KOG0223|consen 155 DPRRS-------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHWIYWVGPLL 212 (238)
T ss_pred cCCCc-------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEEEEEhhHHH
Confidence 77764 478999999999999999999999999999999999987 59999999999986
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=3.1e-48 Score=343.40 Aligned_cols=210 Identities=24% Similarity=0.363 Sum_probs=174.2
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhH
Q 024687 36 LGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVT 115 (264)
Q Consensus 36 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavT 115 (264)
....+++|++++||+||++|+|++++++....... ...+.+.+++++|+++++.+++++++||||+|||||
T Consensus 48 ~~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~---------~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVT 118 (296)
T PLN00184 48 SVSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQND---------NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVT 118 (296)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC---------CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHH
Confidence 34567899999999999999999998765322111 112466788999999999999999999999999999
Q ss_pred HHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCC---ccccCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 024687 116 FGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGG---ANELADGYNKGTGLGAEIIGTFVLVYTVFSA 192 (264)
Q Consensus 116 la~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~ 192 (264)
+++++.++++|.++++|+++|++|+++|+++++.+++...+..... .....+..+..++|+.|+++|++|+++++.+
T Consensus 119 la~al~g~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~ 198 (296)
T PLN00184 119 IAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGV 198 (296)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHhe
Confidence 9999999999999999999999999999999999986543221111 1112334578899999999999999999987
Q ss_pred cCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 193 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
.++++.. ..+.|++||+++.+++++.+++||++||||||||||++++ .|+++||||++|++.
T Consensus 199 ~~~~~~~-----~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~WVy~vgPilG 260 (296)
T PLN00184 199 ATDNRAI-----GELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIWIYIVAPTLG 260 (296)
T ss_pred eccCcCC-----CcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccchHHhHHHHH
Confidence 6654322 2478999999999999999999999999999999999975 689999999999863
No 3
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.4e-49 Score=338.18 Aligned_cols=214 Identities=26% Similarity=0.383 Sum_probs=183.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHH
Q 024687 38 KWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 117 (264)
Q Consensus 38 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla 117 (264)
++++.|++++||+||++|++++++++.+...+.. ....++.+.++||+++++.+++.+++||||+|||||++
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g--------~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a 99 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGG--------TGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLA 99 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccC--------CCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHH
Confidence 5678999999999999999999998876655432 22345667889999999999999999999999999999
Q ss_pred HHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCc--------------cccCCCCcchhhHHHHHHHHH
Q 024687 118 LFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA--------------NELADGYNKGTGLGAEIIGTF 183 (264)
Q Consensus 118 ~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~f~~E~~~T~ 183 (264)
+++.||++|+|+++|+++|++||++|++.+|.+|.+.+++++++. +.+.+..+.+++|+.|+++|.
T Consensus 100 ~~~~g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa 179 (316)
T KOG0224|consen 100 MCILGRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTA 179 (316)
T ss_pred HHHhcCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888876542 234677899999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhh-----CCCCCCCccEEEEee
Q 024687 184 VLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY-----NKEKAWDDQVLQFFH 258 (264)
Q Consensus 184 iL~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~-----~~~~~w~~~wvywv~ 258 (264)
+|+.++++++|++|..+ +.+.|+++|+.+.++.++.|.+||..+|||||||||+|. +.+.++.++|.+|++
T Consensus 180 ~L~~~l~aI~D~rN~~p----~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvP 255 (316)
T KOG0224|consen 180 MLVLCLFAITDKRNPIP----TGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVP 255 (316)
T ss_pred HHHhheeEEecCCCCCC----cchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeee
Confidence 99999999999998543 468999999999999999999999999999999999983 334445444555555
Q ss_pred ccccc
Q 024687 259 YTITF 263 (264)
Q Consensus 259 P~~~~ 263 (264)
-+.|+
T Consensus 256 ivgPl 260 (316)
T KOG0224|consen 256 IVGPL 260 (316)
T ss_pred ehhhh
Confidence 55443
No 4
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=2.7e-47 Score=328.59 Aligned_cols=219 Identities=35% Similarity=0.480 Sum_probs=185.3
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhh
Q 024687 35 ELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAV 114 (264)
Q Consensus 35 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPav 114 (264)
|.++++++|++++||+||++++|+++++.........+. +.....+...+++++|+.+++.+++++++||||+||||
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~---~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaV 77 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSS---GSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAV 77 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTT---STTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc---cccccccHHHHHHHHHHhhhhhhhhhhhccccccccch
Confidence 467789999999999999999999988665332221110 00112356778999999999999999999999999999
Q ss_pred HHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcC
Q 024687 115 TFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATD 194 (264)
Q Consensus 115 Tla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~ 194 (264)
|++.++.|+++|.+++.|+++|++|+++|+++++.++++.........+.+.++.+..++|+.|+++|++|+++++...|
T Consensus 78 Tla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~ 157 (227)
T PF00230_consen 78 TLAFALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVAD 157 (227)
T ss_dssp HHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hhheeeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcc
Confidence 99999999999999999999999999999999999998864444445556778889999999999999999999999999
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 195 PKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 195 ~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
++++.+. +.+.|+.||+++.++.+..++.||++||||||||||++.+ .|+++||||++|++.
T Consensus 158 ~~~~~~~---~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy~~~P~~G 219 (227)
T PF00230_consen 158 DKRKFPL---GPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVYWVGPFIG 219 (227)
T ss_dssp TTSSSTS---SGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHHHHHHHHH
T ss_pred ccccccc---ccccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEEEehHHHH
Confidence 8876643 2478999999999999999999999999999999999986 499999999999863
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=2.6e-46 Score=331.87 Aligned_cols=211 Identities=25% Similarity=0.323 Sum_probs=175.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHH
Q 024687 38 KWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 117 (264)
Q Consensus 38 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla 117 (264)
.++++|++++||+||++++|++++++....... ...+.+.+++++|+++++.+++++++||||+|||||++
T Consensus 46 ~~~~~~~~laEfigT~llvf~g~g~~~~~~~~~---------~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla 116 (294)
T PTZ00016 46 YRPNVREYVAEFLGTFVLLFFGEGVVATTHTVG---------NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLG 116 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---------CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHH
Confidence 367889999999999999999998765432211 11245678899999999999999999999999999999
Q ss_pred HHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCC-------------ccccCCCCcchhhHHHHHHHHHH
Q 024687 118 LFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGG-------------ANELADGYNKGTGLGAEIIGTFV 184 (264)
Q Consensus 118 ~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~f~~E~~~T~i 184 (264)
+++.|+++|.+++.|+++|++|+++|++++|.++++.++..+.. ...+.++.+..++|+.|+++|++
T Consensus 117 ~~l~g~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~i 196 (294)
T PTZ00016 117 NAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAI 196 (294)
T ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998755433211 11223466778999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhC---CCCCCC----ccEEEEe
Q 024687 185 LVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN---KEKAWD----DQVLQFF 257 (264)
Q Consensus 185 L~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~---~~~~w~----~~wvywv 257 (264)
|+++++.+.|+++... +...|+.||+++.+++++.++.||++||||||||||+++. +...|+ |+||||+
T Consensus 197 Lv~~ila~~d~~~~~~----~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~v 272 (294)
T PTZ00016 197 LLLVILAITDPNNCPA----FNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLV 272 (294)
T ss_pred HHHHHHHhccCccCCC----cCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeeh
Confidence 9999999999876432 2467999999999999999999999999999999999962 222443 7899999
Q ss_pred eccc
Q 024687 258 HYTI 261 (264)
Q Consensus 258 ~P~~ 261 (264)
+|++
T Consensus 273 gP~v 276 (294)
T PTZ00016 273 APFV 276 (294)
T ss_pred HHHH
Confidence 9986
No 6
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-46 Score=321.22 Aligned_cols=211 Identities=31% Similarity=0.476 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
++.|++++||+||++|++++++++........+ ....+++.+++++|+.+++.+|+++++||||+|||||++++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~------~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la 76 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSK------ALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALA 76 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhcccc------ccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHH
Confidence 456888999999999999999998876655432 23456777999999999999999999999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcC-C-----CccccCC-CCcchhhHHHHHHHHHHHHHHHHHh
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYG-G-----GANELAD-GYNKGTGLGAEIIGTFVLVYTVFSA 192 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~-~-----~~~~~~~-~~~~~~~f~~E~~~T~iL~~~il~~ 192 (264)
+.|+++|++++.||++|++|+++|+.+++.++++.++..+ + +...+.| ..+..++|+.|+++|++|+++++.+
T Consensus 77 ~~g~fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~ 156 (241)
T COG0580 77 VRGRFPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILAL 156 (241)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998776664 1 2222233 3477899999999999999999998
Q ss_pred cCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhh---C-C--CCCCCccEEEEeeccc
Q 024687 193 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIY---N-K--EKAWDDQVLQFFHYTI 261 (264)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~---~-~--~~~w~~~wvywv~P~~ 261 (264)
.|+++. . +.+.|+.||+.+.+++++.++.||.++|||||||||+.+ + . ..++.|.|+||++|++
T Consensus 157 ~~~~~~-~----~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpii 226 (241)
T COG0580 157 TDDGNA-N----AGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIV 226 (241)
T ss_pred hccCcc-c----ccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHH
Confidence 875544 1 348999999999999999999999999999999999954 3 1 1123699999999986
No 7
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=2.5e-45 Score=316.05 Aligned_cols=206 Identities=29% Similarity=0.499 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHc
Q 024687 42 YRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLG 121 (264)
Q Consensus 42 ~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~~ 121 (264)
+|++++||+||++++|++++++....... ....+.+.+++++|+++++.+++++++||+|+|||||+++++.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~--------~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~ 73 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFP--------ELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAG 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccC--------CCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHh
Confidence 58999999999999999998765322111 0122466689999999999999999999999999999999999
Q ss_pred cCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhh--hhcC-----CCc-cccCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 024687 122 RKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYY--NRYG-----GGA-NELADGYNKGTGLGAEIIGTFVLVYTVFSAT 193 (264)
Q Consensus 122 g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~-----~~~-~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~ 193 (264)
|+++|.+.+.|+++|++|+++|+.+++.+++... +..+ .+. .......+..++++.|+++|++|+++++...
T Consensus 74 ~~i~~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~ 153 (231)
T PRK05420 74 GRFPAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGAT 153 (231)
T ss_pred CCCCHHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998875421 1110 000 0112345778999999999999999999998
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 194 DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
|+++. +.+.|+.||+.+.++.++.+++||++||||||||||++++ +..|+++||||++|++.
T Consensus 154 ~~~~~------~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g-~~~~~~~wvy~vgP~~G 215 (231)
T PRK05420 154 DKRAP------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWALEQLWLFWVAPIVG 215 (231)
T ss_pred CCCCC------CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhC-CCCccceEEeehHHHHH
Confidence 86542 2468999999999999999999999999999999999975 33457999999999863
No 8
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=2.5e-44 Score=313.49 Aligned_cols=214 Identities=30% Similarity=0.448 Sum_probs=176.5
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchh
Q 024687 34 EELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPA 113 (264)
Q Consensus 34 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPa 113 (264)
++..+++++|++++||+||++++|+++++.......... +.....+.+.+++++|+++++.+++++++||+|+|||
T Consensus 14 ~~~~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~----~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPA 89 (256)
T PLN00167 14 QQSVTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPD----AASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPA 89 (256)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc----ccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHH
Confidence 344567899999999999999999999987643211000 0011235677899999999999999999999999999
Q ss_pred hHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 024687 114 VTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT 193 (264)
Q Consensus 114 vTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~ 193 (264)
||++.++.|+++|.+++.|+++|++|+++|+++++.++++... +.+...++.+..++++.|+++|++|+++++...
T Consensus 90 vtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~ 165 (256)
T PLN00167 90 VTFGMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHV----PTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAG 165 (256)
T ss_pred HHHHHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccc----cccccCcccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999988654211 112223455678899999999999999999988
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 194 DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
|+++... +...|+.||+++.++.++.+++||++||||||||||++++ .|+++|+||++|++.
T Consensus 166 ~~~~~~~----~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvgP~~G 227 (256)
T PLN00167 166 DPRRGLL----GAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVGPLLG 227 (256)
T ss_pred cccccCC----CCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHHHHHH
Confidence 8765321 3478999999999999999999999999999999999965 599999999999863
No 9
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=1.3e-44 Score=314.34 Aligned_cols=212 Identities=33% Similarity=0.529 Sum_probs=174.2
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhH
Q 024687 36 LGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVT 115 (264)
Q Consensus 36 ~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavT 115 (264)
...++.+|++++||+||++++|++++++......... +.....+.+.+++++|+.+++.+++++++||+|+|||||
T Consensus 12 ~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~----~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt 87 (250)
T PLN00166 12 SFSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSD----AALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVT 87 (250)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc----ccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHH
Confidence 3457788999999999999999999987642111100 000122456789999999999999999999999999999
Q ss_pred HHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcCC
Q 024687 116 FGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDP 195 (264)
Q Consensus 116 la~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~ 195 (264)
+++++.++++|.+.++|+++|++|+++|+.+++.++++.- .......++.+..++++.|+++|++|+++++...++
T Consensus 88 ~~~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~ 163 (250)
T PLN00166 88 LGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGES----VPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAAD 163 (250)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCC----CcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999998875421 111223456788999999999999999999987665
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeeccc
Q 024687 196 KRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTI 261 (264)
Q Consensus 196 ~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~ 261 (264)
+++... +.+.|+.||+.+.+++++.+++||++||||||||||++.+ .|+++||||++|++
T Consensus 164 ~~~~~~---~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywvgPi~ 223 (250)
T PLN00166 164 PKKGSL---GTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWVGPLV 223 (250)
T ss_pred cccccc---ccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhHHHHH
Confidence 543211 3478999999999999999999999999999999999975 69999999999986
No 10
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=4.4e-44 Score=315.05 Aligned_cols=204 Identities=24% Similarity=0.374 Sum_probs=170.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHH
Q 024687 38 KWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 117 (264)
Q Consensus 38 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla 117 (264)
.++++|++++||+||++|+|++++++....... ...+.+.+++++|+++++.+++++++||||+|||||++
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~---------~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla 108 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYG---------GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVT 108 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---------CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHH
Confidence 357889999999999999999998766432210 11245668889999999999999999999999999999
Q ss_pred HHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 024687 118 LFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 197 (264)
Q Consensus 118 ~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~ 197 (264)
+++.++++|.++++|+++|++|+++|+++++.+++... .+.....++.+..++++.|+++|++|+++++.+.++++
T Consensus 109 ~~~~~~~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~----~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~ 184 (283)
T PLN00182 109 FAIFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTP----EAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSR 184 (283)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccc
Confidence 99999999999999999999999999999999885321 12222334567889999999999999999998755443
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 198 SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 198 ~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
.. +...|+.+|+++.++.++.+++||++|||||+|||+++.+ .|+++|+||++|++.
T Consensus 185 ~~-----~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~vap~lG 241 (283)
T PLN00182 185 AV-----GELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIVGPFVG 241 (283)
T ss_pred cC-----CcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHHHHHHH
Confidence 21 2357999999999999999999999999999999999864 699999999999863
No 11
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=3.2e-44 Score=312.86 Aligned_cols=213 Identities=35% Similarity=0.551 Sum_probs=174.4
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhh
Q 024687 35 ELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAV 114 (264)
Q Consensus 35 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPav 114 (264)
|...++.+|++++||+||++|++++++++......... +.....+.+.+++++|+++++.+++++++||+|+|||+
T Consensus 13 ~~~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~----~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAv 88 (252)
T PLN00027 13 EASHPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDN----GSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAV 88 (252)
T ss_pred hhhcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC----CCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHH
Confidence 33456788999999999999999999886532211110 00112346678999999999999999999999999999
Q ss_pred HHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhc-
Q 024687 115 TFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT- 193 (264)
Q Consensus 115 Tla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~- 193 (264)
|+++++.|+++|.+.++|+++|++|+++|+.+++.+.++.. .+.....++.+..++++.|+++|++|+++++.+.
T Consensus 89 tl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~ 164 (252)
T PLN00027 89 TFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE----TSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAV 164 (252)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc----cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999987764321 1223345677889999999999999999999875
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 194 DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
|+|+... +.+.|+.||+.+..++++.+++||++||||||||||++.+ .|+++||||++|++.
T Consensus 165 ~~~~~~~----~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vgP~~G 226 (252)
T PLN00027 165 DPKKGDL----GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAGPLIG 226 (252)
T ss_pred ccccCCc----cchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHHHHHH
Confidence 4443211 3478999999999999999999999999999999999975 699999999999863
No 12
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=9.4e-44 Score=314.17 Aligned_cols=203 Identities=26% Similarity=0.398 Sum_probs=170.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHH
Q 024687 38 KWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 117 (264)
Q Consensus 38 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla 117 (264)
..+++|++++||+||++|+|+++++....... . ...+.+.+++++|+++++.+++++++||||+|||||++
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~--~-------~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla 137 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKY--D-------GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIA 137 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhcccc--C-------CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHH
Confidence 45688999999999999999998764422111 0 11245667899999999999999999999999999999
Q ss_pred HHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 024687 118 LFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 197 (264)
Q Consensus 118 ~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~ 197 (264)
+++.++++|.+.++|+++|++|+++|+++++.++++... .+. ..++.+..++++.|+++|++|+++++.+.++++
T Consensus 138 ~al~g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~---~g~--t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~ 212 (298)
T PLN00026 138 FAALRHFPWKHVPAYIAAQVSASICASFALKGVFHPFMS---GGV--TVPSVSTGQAFALEFIITFNLLFVVTAVATDTR 212 (298)
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---Cce--eeecccHHHHHHHHHHHHHHHHHhheeeecCCC
Confidence 999999999999999999999999999999999865321 122 234678899999999999999999997654433
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 198 SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 198 ~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
.. ....++.+|+++.+.+++.+++||++||||||||||++.+ .|+++||||++|++.
T Consensus 213 ~~-----~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~vaPilG 269 (298)
T PLN00026 213 AV-----GELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVAPTLG 269 (298)
T ss_pred Cc-----CCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHHHHHH
Confidence 22 2357899999999999999999999999999999999964 799999999999863
No 13
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=1.9e-41 Score=292.25 Aligned_cols=209 Identities=39% Similarity=0.612 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHcc
Q 024687 43 RAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGR 122 (264)
Q Consensus 43 ~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~~g 122 (264)
|++++||+||++++++++++......... ...+.+.+++++|+.+.+.+++++++||+|+|||+|+++++.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~--------~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~ 72 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGG--------ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGG 72 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCC--------CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhC
Confidence 57899999999999999988765432211 1224566899999999999999999999999999999999999
Q ss_pred CCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCc--------cccCCCCcchhhHHHHHHHHHHHHHHHHHhcC
Q 024687 123 KVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA--------NELADGYNKGTGLGAEIIGTFVLVYTVFSATD 194 (264)
Q Consensus 123 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~ 194 (264)
+++|.+.++|+++|++|+++|+.+++.++++.+++.+... +.+.++.+..++++.|+++|++|+++++...+
T Consensus 73 ~~~~~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~ 152 (228)
T cd00333 73 RFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTD 152 (228)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999988766543322 23456778899999999999999999999887
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 195 PKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 195 ~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
+++.... ....|+.+|+.+.+..++.+++||+++||||||+|+++++..+.|+++|+||++|++.
T Consensus 153 ~~~~~~~---~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lG 217 (228)
T cd00333 153 DPNGPPP---GGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIG 217 (228)
T ss_pred ccccCCC---CCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHH
Confidence 6654211 3468999999999999999999999999999999999975323699999999999863
No 14
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=1.9e-41 Score=297.38 Aligned_cols=202 Identities=25% Similarity=0.347 Sum_probs=169.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHH
Q 024687 38 KWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 117 (264)
Q Consensus 38 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla 117 (264)
..+.+|++++||++|++++|++++++....... ...+.+.+++++|+++++.+++++++||+|+|||||++
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~---------~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla 111 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSG---------GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIA 111 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---------CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHH
Confidence 456789999999999999999988765432211 11245667889999999999999999999999999999
Q ss_pred HHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 024687 118 LFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 197 (264)
Q Consensus 118 ~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~ 197 (264)
+++.++++|.+.++|+++|++|+++|+++++.+++... ......+..+..++++.|+++|++|+++++.+.++++
T Consensus 112 ~~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-----~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~ 186 (274)
T PLN00183 112 FATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA-----DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQ 186 (274)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----ccccCCCcccHHHHHHHHHHHHHHHHHhhheeecccc
Confidence 99999999999999999999999999999988876421 1112234456789999999999999999998877653
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeeccc
Q 024687 198 SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTI 261 (264)
Q Consensus 198 ~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~ 261 (264)
.. +...++.+|+.+.+.+++.+++||++|||||+|+|+++.. .|+++|+||++|++
T Consensus 187 ~~-----~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~---~~~~~wvy~vapil 242 (274)
T PLN00183 187 SL-----GHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSW---DFKDIWIYITAPTI 242 (274)
T ss_pred CC-----CCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCC---ChhheehHHHHHHH
Confidence 22 2356899999999999999999999999999999999853 69999999999985
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=4.6e-40 Score=281.48 Aligned_cols=208 Identities=38% Similarity=0.642 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHccCCcc
Q 024687 47 AEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSL 126 (264)
Q Consensus 47 ~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~~g~~~~ 126 (264)
+||+||++++++++++.......... + .....+.+.+++++|+.+.+.+++++++||+|+|||||+++++.++++|
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~---~-~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~ 76 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAY---G-AVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPL 76 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhccccc---C-CCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCH
Confidence 59999999999999987653322110 0 0011146678999999999999999999999999999999999999999
Q ss_pred chhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Q 024687 127 IRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV 206 (264)
Q Consensus 127 ~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~~~~~~~~ 206 (264)
.+.++|+++|++|+++|+.+++.++++.+...........++.+..++++.|+++|++|+++++...+++++... ..
T Consensus 77 ~~~~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~---~~ 153 (216)
T TIGR00861 77 KRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPR---GG 153 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCC---Cc
Confidence 999999999999999999999998876542111111122456788999999999999999999988876544322 23
Q ss_pred chhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 207 LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 207 ~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
..|+.+|+.+.++.+..+++||+++||||+|+|+++++ ...|+++|+||++|++.
T Consensus 154 ~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~-~~~~~~~~vy~vap~~G 208 (216)
T TIGR00861 154 FAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAG-LAGWGNHWVYWVGPIIG 208 (216)
T ss_pred cHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhc-cccccceeHHHHHHHHH
Confidence 68999999999999999999999999999999999864 24699999999999863
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.63 E-value=1.2e-15 Score=134.77 Aligned_cols=98 Identities=24% Similarity=0.314 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+.++.+++|+++|++|+++++++....+ . . . . ..++++|+.+++.+++.+++||+|+|||+|++++
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~-~--~-------~---~-~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpa 222 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSR-A--V-------G---E-LAGIAVGMTIILNVFVAGPISGASMNPARSLGPA 222 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccc-c--C-------C---c-chhHHHHHHHHHHHHHccccCccccChHHHHHHH
Confidence 4678999999999999998876543211 1 0 0 1 1478899999999999999999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhhh
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQK 152 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (264)
+.++ .|.+.|+||++|++|+++|+++.+.+..
T Consensus 223 l~~~-~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 223 IVMG-RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred HHhc-cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 9865 5889999999999999999999988863
No 17
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.60 E-value=3.3e-15 Score=128.94 Aligned_cols=99 Identities=23% Similarity=0.206 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+.+|.++.|+++|+++++.++......+.. ......++.+|+.+...+++.+++||+|+|||+|+++
T Consensus 127 ~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~------------~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~ 194 (228)
T cd00333 127 VSNGNAFFVEFIGTFILVLVVFATTDDPNGP------------PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGP 194 (228)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccccccC------------CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHH
Confidence 4678999999999999999888764321110 0112357889999999999999999999999999999
Q ss_pred HHccCC--ccchhhHHhhhhhhHHHHHHHHHHh
Q 024687 119 FLGRKV--SLIRALLYMVAQCLGAICGCGFVKA 149 (264)
Q Consensus 119 ~~~g~~--~~~~~~~yi~aQ~lGa~~g~~~~~~ 149 (264)
++.++. +|.+.|+||++|++|+++|+++.+.
T Consensus 195 ~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 195 ALFTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred HHHhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 999988 7999999999999999999988654
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.59 E-value=3.5e-15 Score=132.50 Aligned_cols=98 Identities=27% Similarity=0.379 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+.++.++.||++|++|++++++..... .. . +. ..++++|+.+++.+++.+++||+|+|||+|++++
T Consensus 185 s~~~a~~~Efi~TfiLv~vi~~v~~~~-~~--~----------~~-~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPa 250 (298)
T PLN00026 185 STGQAFALEFIITFNLLFVVTAVATDT-RA--V----------GE-LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPA 250 (298)
T ss_pred cHHHHHHHHHHHHHHHHHhheeeecCC-CC--c----------CC-ccchHHHHHHHHHHHHhcccCccccChHHHHHHH
Confidence 567899999999999999877532211 11 0 00 1468899999999999999999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhhh
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQK 152 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (264)
+.++ +|.+.|+||++|++|+++|+++.+.+..
T Consensus 251 l~~~-~~~~~wVy~vaPilGAilga~ly~~~~~ 282 (298)
T PLN00026 251 VAAG-NYRAIWIYLVAPTLGALAGAGTYTAVKL 282 (298)
T ss_pred HhcC-CchheeHHHHHHHHHHHHHHHHHHHHhC
Confidence 9876 7999999999999999999999777643
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.58 E-value=5.4e-15 Score=130.20 Aligned_cols=99 Identities=24% Similarity=0.334 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHH
Q 024687 41 FYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL 120 (264)
Q Consensus 41 ~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~ 120 (264)
.++.++.|+++|+++++.+++.....+. . . . ..++.+|+.+++.+++.+++||+|+|||+|++.++
T Consensus 160 ~~~~~~~E~v~T~iLv~~i~~~~~~~~~--~--------~---~-~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai 225 (274)
T PLN00183 160 CSSAFWVEFIATFIVMFLAASLTSQPQS--L--------G---H-LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAI 225 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeccccC--C--------C---C-ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHH
Confidence 5789999999999999988765432211 0 0 1 13677888899999999999999999999999999
Q ss_pred ccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhh
Q 024687 121 GRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSY 154 (264)
Q Consensus 121 ~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (264)
.+ .+|.+.|+||++|++|+++|+++.+.++.+.
T Consensus 226 ~~-~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 226 VS-WDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred hC-CChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 87 5899999999999999999999999987554
No 20
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.50 E-value=4.9e-14 Score=120.66 Aligned_cols=96 Identities=24% Similarity=0.228 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+.++.++.|+++|+++++.++.+....+. .. .....++.+|+.++..++..+++||+|+|||+|++.
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~-~~-----------~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~ 186 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPRNR-VP-----------RGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGP 186 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCCCC-CC-----------CCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhH
Confidence 367899999999999999988765432111 00 011368899999999999999999999999999999
Q ss_pred HHcc-CCccchhhHHhhhhhhHHHHHHHH
Q 024687 119 FLGR-KVSLIRALLYMVAQCLGAICGCGF 146 (264)
Q Consensus 119 ~~~g-~~~~~~~~~yi~aQ~lGa~~g~~~ 146 (264)
++.+ ..+|.+.|+|+++|++|+++++.+
T Consensus 187 ~l~~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 187 ALFAGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred HHHhccccccceeHHHHHHHHHHHHHHHh
Confidence 9976 578999999999999999999875
No 21
>PLN00184 aquaporin NIP1; Provisional
Probab=99.43 E-value=6.5e-13 Score=118.22 Aligned_cols=98 Identities=23% Similarity=0.342 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+.++.++.|+++|++|++++++.....+. . +. ..++.+|+.+...+++.+++||+++|||++++++
T Consensus 176 s~~~af~~E~i~TfvLv~~il~~~~~~~~--~-----------~~-~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPa 241 (296)
T PLN00184 176 SDLQAFVMEFIVTFYLMFIISGVATDNRA--I-----------GE-LAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPA 241 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHHHheeccCcC--C-----------Cc-chHHHHHHHHHHHHHHhcccCccccCchhhHHHH
Confidence 57799999999999999988865332110 0 00 1478899999999999999999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhhh
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQK 152 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (264)
+... .|...|+||++|++|+++|+++.+.+..
T Consensus 242 l~~~-~~~~~WVy~vgPilGa~laal~y~~l~~ 273 (296)
T PLN00184 242 MVYG-CYKGIWIYIVAPTLGAIAGAWVYNTVRY 273 (296)
T ss_pred HHhh-cccccchHHhHHHHHHHHHHHHHHHHhc
Confidence 9754 5789999999999999999999887764
No 22
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.2e-13 Score=118.78 Aligned_cols=100 Identities=19% Similarity=0.209 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+.++.++.|++.||.+++.+++.....++. ...++.+|+++.+.+++.+++||+++|||++++.
T Consensus 129 ~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---------------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGp 193 (238)
T KOG0223|consen 129 LSTGQGLVIEIILTFILVFTVFATATDPRRS---------------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGP 193 (238)
T ss_pred CCcchhHHHHHHHHHHHhheeEEEeecCCCc---------------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhH
Confidence 4567899999999999999877644433222 2368899999999999999999999999999999
Q ss_pred HHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhh
Q 024687 119 FLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSY 154 (264)
Q Consensus 119 ~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (264)
++..+. |...|+||++|++|+++++++.+.++.++
T Consensus 194 Avv~~~-w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 194 AVVYGS-WDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHHhcC-CCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 998875 99999999999999999999999988655
No 23
>PLN00166 aquaporin TIP2; Provisional
Probab=99.37 E-value=3.4e-12 Score=111.30 Aligned_cols=104 Identities=19% Similarity=0.213 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+.++.++.|+++|++|++..+......+.... ....++.+|+.++.+++..++.||+.+|||+++++
T Consensus 137 ~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~------------~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gP 204 (250)
T PLN00166 137 LGAIEGVVMEIVVTFALVYTVYATAADPKKGSL------------GTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGP 204 (250)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhccccccccc------------ccchhHHHHHHHHHHHHcccCCCCCccCchHhhHH
Confidence 356799999999999999988765332111000 01247889999999999999999999999999999
Q ss_pred HHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhh
Q 024687 119 FLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYY 155 (264)
Q Consensus 119 ~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~ 155 (264)
++..+ .|.+.|+||+++++|+++++++.+.++.+.+
T Consensus 205 al~~~-~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~~ 240 (250)
T PLN00166 205 AVVSG-DFSQIWIYWVGPLVGGALAGLIYGDVFIGSY 240 (250)
T ss_pred HHhcC-CCcccchhhHHHHHHHHHHHHHHHHHhcccC
Confidence 99865 5889999999999999999999877765443
No 24
>PRK05420 aquaporin Z; Provisional
Probab=99.32 E-value=7.3e-12 Score=108.15 Aligned_cols=100 Identities=23% Similarity=0.287 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+..+.++.|+++|++|++..+..... ++ . . + ..++.+|+.+....+..++.||+.+|||+++++
T Consensus 129 ~~~~~~~~~E~v~T~iLv~~i~~~~~~--~~-~--------~--~--~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gp 193 (231)
T PRK05420 129 YSLLAALVCEVVLTAFFLLVILGATDK--RA-P--------A--G--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGV 193 (231)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCC--CC-C--------C--c--chHHHHHHHHHHHHHHhhccCCCccCcHHHHHH
Confidence 357899999999999999988765431 11 0 0 1 247889999998999999999999999999999
Q ss_pred HHccC-CccchhhHHhhhhhhHHHHHHHHHHhhhhh
Q 024687 119 FLGRK-VSLIRALLYMVAQCLGAICGCGFVKAFQKS 153 (264)
Q Consensus 119 ~~~g~-~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (264)
.+..+ .++...|+||++|++|+++++++.+.++.+
T Consensus 194 al~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 194 ALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred HHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 98743 445688999999999999999998777644
No 25
>PLN00027 aquaporin TIP; Provisional
Probab=99.30 E-value=1.9e-11 Score=106.84 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+.++.++.|+++|++|++.++......+.. . . ....++.+|+.+....+..++.||+.+|||+++++.
T Consensus 140 ~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~--~-------~---~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPa 207 (252)
T PLN00027 140 GVWNAFVFEIVMTFGLVYTVYATAVDPKKG--D-------L---GIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 207 (252)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhccccccC--C-------c---cchHHHHHHHHHHHHHHhcccccccccCcchhHHHH
Confidence 577899999999999999886653322111 0 0 012578888888888999999999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhhhh
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKS 153 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (264)
+... .|...|+||++|++|+++|+++.+.++.+
T Consensus 208 l~~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 208 VVSW-TWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred HHhh-cchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9875 58899999999999999999998888643
No 26
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.26 E-value=1.7e-11 Score=109.30 Aligned_cols=103 Identities=21% Similarity=0.230 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+..+.++.|+++|++|++.+++.... +.. .. .. ..++++|+.+..+.+..++.||+.+|||+++++
T Consensus 181 ~s~~~a~~~E~i~T~iLv~~ila~~d~-~~~-~~-------~~----~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGP 247 (294)
T PTZ00016 181 EGNFYAIFSELILTAILLLVILAITDP-NNC-PA-------FN----YLPVAVGLLVFVIGISFGGNTGYALNPARDLGP 247 (294)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhccC-ccC-CC-------cC----cccHHHHHHHHHHHHhccCCCCCcccchhhHHH
Confidence 457899999999999999988765321 111 10 01 146778888888888899999999999999999
Q ss_pred HHcc-----CCccc----hhhHHhhhhhhHHHHHHHHHHhhhhhh
Q 024687 119 FLGR-----KVSLI----RALLYMVAQCLGAICGCGFVKAFQKSY 154 (264)
Q Consensus 119 ~~~g-----~~~~~----~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (264)
.+.. +..|. +.|+||+++++|+++|+++.+.+.+++
T Consensus 248 al~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~ 292 (294)
T PTZ00016 248 RLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPL 292 (294)
T ss_pred HHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 9863 33443 589999999999999999988876543
No 27
>PLN00167 aquaporin TIP5; Provisional
Probab=99.19 E-value=7e-11 Score=103.41 Aligned_cols=101 Identities=21% Similarity=0.162 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+.++.++.|+++|+++++..+..... +.... . ...++.+|+.+....+..++.||+.+|||+++++.
T Consensus 142 s~~~~~~~E~i~T~~L~~~i~~~~~~-~~~~~--------~----~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPa 208 (256)
T PLN00167 142 TGFGASVLEGVLTFGLVYTVYAAGDP-RRGLL--------G----AIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSA 208 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccc-cccCC--------C----CcchHHHHHHHHHHHHhccCCCCcccCcccchHHH
Confidence 45688999999999999987654321 11100 0 12467888888999999999999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhh
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSY 154 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (264)
+... +|...|+||+++++|+++++++...++.+.
T Consensus 209 l~~~-~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~ 242 (256)
T PLN00167 209 VVAG-SFKNQAVYWVGPLLGGAVAGLLYDNVVFPT 242 (256)
T ss_pred Hhcc-CccCcEEEeHHHHHHHHHHHHHHHHHhCCC
Confidence 9764 578889999999999999999988877543
No 28
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.6e-10 Score=99.36 Aligned_cols=99 Identities=20% Similarity=0.242 Sum_probs=78.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
++..+.++.|+++|++|++.+.+.....+. . .+ ..++.+|+.++.+..+.++.||..+|||+++++
T Consensus 133 ~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~--~----------~~--~apl~iGllv~~i~~s~g~~TG~aiNPARdlGp 198 (241)
T COG0580 133 YSLGQAFLIEFVGTFVLVLGILALTDDGNA--N----------AG--FAPLAIGLLVTAIGLSLGPTTGTAINPARDLGP 198 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhccCcc--c----------cc--chHHHHHHHHHHHHHHhcCCCCCccChHHHHHH
Confidence 467899999999999999988775431111 0 01 257889999999999999999999999999999
Q ss_pred HHc----cCCcc----chhhHHhhhhhhHHHHHHHHHHhhh
Q 024687 119 FLG----RKVSL----IRALLYMVAQCLGAICGCGFVKAFQ 151 (264)
Q Consensus 119 ~~~----g~~~~----~~~~~yi~aQ~lGa~~g~~~~~~~~ 151 (264)
.+. +..+- .+.|+||++|++|+++|+++.+.++
T Consensus 199 rl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~ 239 (241)
T COG0580 199 RLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLL 239 (241)
T ss_pred HHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHc
Confidence 983 31222 5899999999999999999988664
No 29
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.14 E-value=4e-10 Score=97.03 Aligned_cols=96 Identities=24% Similarity=0.273 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+.++.++.|+++|+++++.........+... .+. ..++.+|+.+....+..+..||+.+|||++++.
T Consensus 132 ~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~-----------~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~ 199 (227)
T PF00230_consen 132 ISLGQAFFSEFIGTFILVLVILAVADDKRKFP-----------LGP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGP 199 (227)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTSTTSSST-----------SSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHH
T ss_pred chhhhhhhhhhhhhhHHHhhhhhhcccccccc-----------ccc-ccceeEEEEEeecccccccccccccCchhhcCc
Confidence 35678999999999999998776543222111 011 247888888888888899999999999999999
Q ss_pred HHccCCccchhhHHhhhhhhHHHHHHHHH
Q 024687 119 FLGRKVSLIRALLYMVAQCLGAICGCGFV 147 (264)
Q Consensus 119 ~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~ 147 (264)
.+.... |...|+||+++++|+++|+++.
T Consensus 200 ~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 200 ALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred eeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 998775 8999999999999999999863
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=97.78 E-value=2.1e-05 Score=69.21 Aligned_cols=103 Identities=19% Similarity=0.133 Sum_probs=77.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHH
Q 024687 38 KWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFG 117 (264)
Q Consensus 38 ~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla 117 (264)
..++++.++-||+||.+|+.+.+... .+++.. ....-++.+|+.++++-...|-.+|--+|||+.++
T Consensus 164 ~ls~~n~F~DqfigTa~L~~~l~aI~--D~rN~~-----------p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlg 230 (316)
T KOG0224|consen 164 HLSLWNGFFDQFIGTAMLVLCLFAIT--DKRNPI-----------PTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLG 230 (316)
T ss_pred HhhhhHHHHHHHHHHHHHHhheeEEe--cCCCCC-----------CcchhHHHHHHHHHHHHHHhhcccCcccCcccccc
Confidence 45789999999999999998655332 222111 11225788898889999999999999999999998
Q ss_pred HHHc----c--C--Cc--cchhhHHhhhhhhHHHHHHHHHHhhhhh
Q 024687 118 LFLG----R--K--VS--LIRALLYMVAQCLGAICGCGFVKAFQKS 153 (264)
Q Consensus 118 ~~~~----g--~--~~--~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (264)
+.+. | . ++ -...|+-+++.++|+++|+++...+..-
T Consensus 231 PRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~Ig~ 276 (316)
T KOG0224|consen 231 PRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFIGF 276 (316)
T ss_pred hHHHHHHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeeeec
Confidence 8765 1 1 11 1456778899999999999998887653
No 31
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=71.78 E-value=68 Score=27.97 Aligned_cols=112 Identities=13% Similarity=0.024 Sum_probs=64.8
Q ss_pred cchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCC
Q 024687 82 VGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGG 161 (264)
Q Consensus 82 ~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~ 161 (264)
...+..++.+++.+.++++.-+..- -=|-.+....++.|+.+|++.+--|.-=.+|=++|++++-.+....-...+.+
T Consensus 55 ~~~l~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~ 132 (250)
T PF01226_consen 55 LAKLVGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSP 132 (250)
T ss_dssp HHHHHHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccH
Confidence 3344556666666655555433321 12666566667788899988777776666777777666555443211000000
Q ss_pred --------ccccCCCCcchhhHHHHHHHHHHHHHHHHHhcCC
Q 024687 162 --------ANELADGYNKGTGLGAEIIGTFVLVYTVFSATDP 195 (264)
Q Consensus 162 --------~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~ 195 (264)
....+.+.+.++.|+-=.+|.++..+.++.....
T Consensus 133 ~~~~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~~~ 174 (250)
T PF01226_consen 133 AMGEYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAFAA 174 (250)
T ss_dssp HHHHHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHCT-
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0112334567888888899999999888866443
No 32
>PRK10805 formate transporter; Provisional
Probab=61.49 E-value=1.2e+02 Score=27.06 Aligned_cols=105 Identities=10% Similarity=0.094 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhc-ccCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhh--hhhhcCC
Q 024687 84 ILGIAWAFGGMIFILVYCTAG-ISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKS--YYNRYGG 160 (264)
Q Consensus 84 ~~~~~~~~g~~l~~~i~~~~~-iSGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~--~~~~~~~ 160 (264)
.+..++.+.+.+.+.++.-+. .+| |-..+++ .+.+|.++.+.+-.|.-=++|=++|++++-.+... ......+
T Consensus 68 ~ll~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~ 143 (285)
T PRK10805 68 KLVGGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANG 143 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCcc
Confidence 344455566555555544444 344 5555544 67788898888755554455555555544332211 0000000
Q ss_pred C-------ccccCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 024687 161 G-------ANELADGYNKGTGLGAEIIGTFVLVYTVFSA 192 (264)
Q Consensus 161 ~-------~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~ 192 (264)
. ....+.+.+..+.|+-=++|.++..+.++..
T Consensus 144 ~~~~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~ 182 (285)
T PRK10805 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0011224567778888888888888888754
No 33
>TIGR02762 TraL_TIGR type IV conjugative transfer system protein TraL. This protein is part of the type IV secretion system for conjugative plasmid transfer. The function of the TraL protein is unknown.
Probab=44.45 E-value=2.4 Score=31.41 Aligned_cols=21 Identities=0% Similarity=-0.023 Sum_probs=16.4
Q ss_pred HhhCCCCCCCccEEEEeeccc
Q 024687 241 VIYNKEKAWDDQVLQFFHYTI 261 (264)
Q Consensus 241 i~~~~~~~w~~~wvywv~P~~ 261 (264)
+-.+++..|-+|+.||.+|.-
T Consensus 59 ~K~g~~~~~l~h~~YW~~p~~ 79 (95)
T TIGR02762 59 IKGGEGENFLLHLFYWYLPGS 79 (95)
T ss_pred HHcCCChhHHHHHHHHHcccc
Confidence 344567789999999998864
No 34
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=41.88 E-value=8.2 Score=29.57 Aligned_cols=20 Identities=30% Similarity=0.551 Sum_probs=16.9
Q ss_pred cccCcccchhhHHHHHHccC
Q 024687 104 GISGGHINPAVTFGLFLGRK 123 (264)
Q Consensus 104 ~iSGah~NPavTla~~~~g~ 123 (264)
.=|+||+||.+.++-.+.++
T Consensus 6 ~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHhcc
Confidence 34789999999999999764
No 35
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=39.64 E-value=2.7e+02 Score=24.64 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=63.3
Q ss_pred chHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhh-hhcCCC
Q 024687 83 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYY-NRYGGG 161 (264)
Q Consensus 83 g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~-~~~~~~ 161 (264)
..+.-++.+++.+.+.+++-+..-=+ |--........++++|++.+--|+-=.+|=++|++++..++.-.- ....++
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~ 140 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANG 140 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 45556677776666555544442101 323333445678899998888777777788888877666652110 011111
Q ss_pred cc--------ccCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 024687 162 AN--------ELADGYNKGTGLGAEIIGTFVLVYTVFSAT 193 (264)
Q Consensus 162 ~~--------~~~~~~~~~~~f~~E~~~T~iL~~~il~~~ 193 (264)
.. .-+-+.+..+.|+--.+|-++.++.++...
T Consensus 141 ~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~ 180 (265)
T COG2116 141 QWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSY 180 (265)
T ss_pred hhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 012334556777777888888888777543
No 36
>PHA02885 putative interleukin binding protein; Provisional
Probab=39.49 E-value=17 Score=27.25 Aligned_cols=21 Identities=5% Similarity=0.028 Sum_probs=13.8
Q ss_pred HHhhCCCCCCCccEEEEeecc
Q 024687 240 AVIYNKEKAWDDQVLQFFHYT 260 (264)
Q Consensus 240 ~i~~~~~~~w~~~wvywv~P~ 260 (264)
|++|.+...-+.-++||++|=
T Consensus 49 rllcs~~lnsedgyiywi~pn 69 (135)
T PHA02885 49 RLLCSGCLNSEDGYIYWIGPN 69 (135)
T ss_pred hheeeeeecCCCceEEEEeCC
Confidence 445543334467899999994
No 37
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=37.38 E-value=2.7e+02 Score=23.98 Aligned_cols=81 Identities=17% Similarity=0.107 Sum_probs=48.6
Q ss_pred chhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhh-cCC-C-------ccccCCCCcchhhHHHHHHH
Q 024687 111 NPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNR-YGG-G-------ANELADGYNKGTGLGAEIIG 181 (264)
Q Consensus 111 NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~-~~~-~-------~~~~~~~~~~~~~f~~E~~~ 181 (264)
|-......++.||.+|.+.+--|.-=.+|=++|++++-.+....-.. ... . ....+.+.+..+.|+.=++|
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 44444444678888888888777777777777777665543211000 000 0 00112345677788888888
Q ss_pred HHHHHHHHHH
Q 024687 182 TFVLVYTVFS 191 (264)
Q Consensus 182 T~iL~~~il~ 191 (264)
.++..+.++.
T Consensus 148 n~lV~lav~~ 157 (239)
T TIGR00790 148 NWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHH
Confidence 8888887764
No 38
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=35.38 E-value=8.2 Score=35.34 Aligned_cols=22 Identities=32% Similarity=0.539 Sum_probs=18.3
Q ss_pred HhhcccCcccchhhHHHHHHcc
Q 024687 101 CTAGISGGHINPAVTFGLFLGR 122 (264)
Q Consensus 101 ~~~~iSGah~NPavTla~~~~g 122 (264)
+.++-+|||+.||+.++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 4566789999999999988864
No 39
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=31.50 E-value=3.8e+02 Score=23.88 Aligned_cols=43 Identities=16% Similarity=-0.015 Sum_probs=25.3
Q ss_pred ccc-chhhHHHHHHccC-----Cccchhh------HHhhhhhhHHHHHHHHHHhh
Q 024687 108 GHI-NPAVTFGLFLGRK-----VSLIRAL------LYMVAQCLGAICGCGFVKAF 150 (264)
Q Consensus 108 ah~-NPavTla~~~~g~-----~~~~~~~------~yi~aQ~lGa~~g~~~~~~~ 150 (264)
-+. ||+..+..++..+ ++..-.- .-++.|-+-+-++.......
T Consensus 109 ~~~~sp~l~~~YA~~EG~flG~iS~~f~~~~~~~~pGIv~qAvl~T~~vf~~ml~ 163 (274)
T PF12811_consen 109 RKVWSPALAPIYAVLEGVFLGGISAVFENIYYSRYPGIVFQAVLGTFGVFAVMLA 163 (274)
T ss_pred CccCChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 355 8999988887554 3322111 23777866666665554443
No 40
>COG0730 Predicted permeases [General function prediction only]
Probab=31.44 E-value=3.3e+02 Score=23.28 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=26.2
Q ss_pred HHccCCccchhhHHhhhhhhHHHHHHHHHHhhh
Q 024687 119 FLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQ 151 (264)
Q Consensus 119 ~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 151 (264)
+-.++.+|+....+..+=++|+++|+.+...+-
T Consensus 66 ~k~~~v~~~~~~~l~~~~~~G~~lG~~l~~~~~ 98 (258)
T COG0730 66 LKRGNVDWKLALILLLGALIGAFLGALLALLLP 98 (258)
T ss_pred HHcCCccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 345667899999999999999999977665553
No 41
>PF03842 Silic_transp: Silicon transporter; InterPro: IPR004693 Marine diatoms such as Cylindrotheca fusiformis encode at least six silicon transport protein homologues which exhibit similar size and topology. One characterised member of the family (Sit1) functions in the energy-dependent uptake of either silicic acid [Si(OH)4] or silicate [Si(OH)3O-] by a Na+ symport mechanism. The system is found in marine diatoms, which make their "glass houses" out of silicon.
Probab=27.59 E-value=4.2e+02 Score=25.16 Aligned_cols=108 Identities=11% Similarity=0.118 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHhhcccCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhh----hhhhcCCCccc
Q 024687 89 WAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKS----YYNRYGGGANE 164 (264)
Q Consensus 89 ~~~g~~l~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~----~~~~~~~~~~~ 164 (264)
+..|+...+.....|+.+ ...|-+-+.--++...+-....+.-+.-++-|-+=++-+++.+... +....+.+.+.
T Consensus 139 L~~GlaMil~t~~lGQLt-tQVNAshcMlDyINnyFalFTlyvam~IEfsGvmHssYLIq~i~~~~sGKPI~SNE~Prtg 217 (512)
T PF03842_consen 139 LDIGLAMILFTCVLGQLT-TQVNASHCMLDYINNYFALFTLYVAMAIEFSGVMHSSYLIQNILSALSGKPIESNEPPRTG 217 (512)
T ss_pred hccchHHHHHHHhhcccc-HhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCcccCCCcchh
Confidence 344554445555667765 7888888887788777777788888888988988888877766532 22222222111
Q ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 024687 165 LADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 197 (264)
Q Consensus 165 ~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~ 197 (264)
..--.-+.+..++=.+..|-+-.++-++.+.+.
T Consensus 218 ~~~~FFWgRvlmSl~ILgF~lAVtl~ALf~G~T 250 (512)
T PF03842_consen 218 FQFAFFWGRVLMSLAILGFCLAVTLVALFNGKT 250 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 111123455566666666666555555555444
No 42
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=24.45 E-value=2.6e+02 Score=22.47 Aligned_cols=25 Identities=24% Similarity=0.449 Sum_probs=18.4
Q ss_pred cchhhHHhhhhhhHHHHHHHHHHhh
Q 024687 126 LIRALLYMVAQCLGAICGCGFVKAF 150 (264)
Q Consensus 126 ~~~~~~yi~aQ~lGa~~g~~~~~~~ 150 (264)
+...+.+..+-+.|+.+|..+.+.+
T Consensus 123 ~~~v~~F~~St~~Ga~ig~~~l~~L 147 (150)
T PF09512_consen 123 FFFVPPFLISTLIGAIIGYILLKAL 147 (150)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777778788888887777665
No 43
>KOG4647 consensus Uncharacterized membrane protein [Function unknown]
Probab=23.47 E-value=2.3e+02 Score=24.44 Aligned_cols=29 Identities=28% Similarity=0.337 Sum_probs=21.6
Q ss_pred CCCccccCchHHHHHHHHHHHHHHHHHHH
Q 024687 30 LIDFEELGKWSFYRAVIAEFIATLLFLYV 58 (264)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~EfigT~~lv~~ 58 (264)
+.+..|.-..++||.+++|.+=-|++.++
T Consensus 83 R~~g~eyv~~sf~~R~~AE~IDffilf~~ 111 (263)
T KOG4647|consen 83 RVDGVEYVAASFLRRLLAELIDFFILFSF 111 (263)
T ss_pred ccCceeeehhHHHHHHHHHHHHHHHHHHH
Confidence 34445555678999999999987777664
No 44
>TIGR00811 sit silicon transporter. Marine diatoms such as Cylindrotheca fusiformis encode at least six silicon transport protein homologues which exhibit similar size and topology. One characterized member of the family (Sit1) functions in the energy-dependent uptake of either Silicic acid [Si(OH)4] or Silicate [Si(OH)3O-] by a Na+ symport mechanism. The system is found in marine diatoms which make their "glass houses" out of silicon.
Probab=21.70 E-value=4.8e+02 Score=25.17 Aligned_cols=60 Identities=8% Similarity=0.237 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhcccCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhh
Q 024687 91 FGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQ 151 (264)
Q Consensus 91 ~g~~l~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 151 (264)
.|+...+...+.|+++ ..+|-+-.---++...+.....++-..-+.-|-.=++.++..+.
T Consensus 140 ~Gl~m~v~TtIlgqLt-~QvnAS~~midFINN~fa~ftL~vAL~iE~TGi~H~aylIq~~~ 199 (545)
T TIGR00811 140 SGIAMVLTVVTIGQLT-AQVNASHCMLDYINTHFMTFTLYVTLIIEATGVMHSCYLIRDMF 199 (545)
T ss_pred hhhHHHHHHHHHHHHH-HHHHHHhCcHHHhccHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 4444444444444443 23332222222233333333333344456666666666665554
No 45
>PRK09979 putative rho operon leader peptide; Provisional
Probab=20.21 E-value=38 Score=19.10 Aligned_cols=17 Identities=35% Similarity=0.716 Sum_probs=13.1
Q ss_pred CCCCCcccccchhHHHH
Q 024687 225 PITGTGINPARSFGAAV 241 (264)
Q Consensus 225 ~~tG~~~NPAr~~gp~i 241 (264)
.++|.++||.--|..+.
T Consensus 5 qisgsslnpscrfssay 21 (33)
T PRK09979 5 QISGSSLNPSCRFSSAY 21 (33)
T ss_pred cccCCcCCccccccccc
Confidence 36899999998877653
Done!