Query 024687
Match_columns 264
No_of_seqs 188 out of 1317
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:39:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024687.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024687hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cn5_A Aquaporin; membrane pro 100.0 9.7E-59 3.3E-63 411.2 12.7 252 1-262 24-275 (304)
2 3iyz_A Aquaporin-4; water tran 100.0 4.7E-52 1.6E-56 370.5 19.8 230 18-262 23-257 (340)
3 3gd8_A Aquaporin-4; proton exc 100.0 1.3E-51 4.4E-56 352.3 17.4 207 40-261 2-208 (223)
4 3llq_A Aquaporin Z 2; aquapori 100.0 1.1E-51 3.8E-56 357.8 13.5 211 37-262 25-241 (256)
5 2zz9_A Aquaporin-4; water tran 100.0 1.6E-50 5.5E-55 357.8 17.8 214 34-262 5-218 (301)
6 2w2e_A AQY1, aquaporin, aquapo 100.0 1.6E-50 5.3E-55 355.5 16.2 211 38-262 41-252 (279)
7 1j4n_A Aquaporin 1; membrane p 100.0 3.5E-50 1.2E-54 352.5 18.3 218 34-261 3-220 (271)
8 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 2.5E-50 8.6E-55 352.2 17.0 211 33-262 3-214 (266)
9 2b6o_A Aquaporin-0, lens fiber 100.0 2.2E-49 7.6E-54 346.1 19.4 209 35-262 3-211 (263)
10 2o9g_A Aquaporin Z; integral m 100.0 8.4E-50 2.9E-54 343.6 14.3 206 41-261 4-217 (234)
11 1ldf_A Glycerol uptake facilit 100.0 2E-49 6.9E-54 349.8 13.5 211 39-261 5-242 (281)
12 3c02_A Aquaglyceroporin; membr 100.0 5.2E-49 1.8E-53 343.2 10.8 211 39-261 7-229 (258)
13 2f2b_A Aquaporin AQPM; protein 100.0 6E-48 2E-52 334.6 15.9 217 40-261 3-231 (246)
14 2f2b_A Aquaporin AQPM; protein 99.6 6.9E-16 2.4E-20 133.3 11.5 100 39-152 141-245 (246)
15 2w2e_A AQY1, aquaporin, aquapo 99.4 7.7E-13 2.6E-17 115.9 10.6 103 39-155 166-268 (279)
16 3llq_A Aquaporin Z 2; aquapori 99.4 6.4E-13 2.2E-17 114.9 8.9 98 39-151 155-253 (256)
17 2o9g_A Aquaporin Z; integral m 99.4 8.4E-13 2.9E-17 113.0 9.4 100 39-153 132-232 (234)
18 2b6o_A Aquaporin-0, lens fiber 99.4 2E-12 6.8E-17 112.5 10.7 100 40-153 126-225 (263)
19 3d9s_A Aquaporin-5, AQP-5; aqu 99.4 3E-12 1E-16 111.4 11.2 100 40-153 128-228 (266)
20 2zz9_A Aquaporin-4; water tran 99.3 5E-12 1.7E-16 111.6 10.3 100 39-152 132-231 (301)
21 3gd8_A Aquaporin-4; proton exc 99.3 6.5E-12 2.2E-16 106.7 10.6 98 40-151 124-221 (223)
22 3cn5_A Aquaporin; membrane pro 99.3 1.4E-12 4.7E-17 115.4 6.5 106 39-153 182-289 (304)
23 3iyz_A Aquaporin-4; water tran 99.3 5.6E-12 1.9E-16 112.4 9.8 99 40-152 172-270 (340)
24 1ldf_A Glycerol uptake facilit 99.3 9.5E-12 3.3E-16 109.2 9.8 103 40-154 144-258 (281)
25 3c02_A Aquaglyceroporin; membr 99.3 1.7E-11 5.7E-16 106.4 10.2 103 42-155 135-246 (258)
26 1j4n_A Aquaporin 1; membrane p 99.3 1.7E-11 5.7E-16 107.1 9.5 98 42-153 138-235 (271)
27 3kcu_A Probable formate transp 63.8 69 0.0024 27.3 12.5 107 84-194 68-184 (285)
28 3s2u_A UDP-N-acetylglucosamine 45.2 2 7E-05 37.8 -2.3 22 102-123 8-29 (365)
29 3tds_E Formate/nitrite transpo 44.0 1.3E+02 0.0044 25.3 9.0 107 83-193 63-178 (268)
30 3kly_A Putative formate transp 37.7 1.9E+02 0.0064 24.5 11.9 106 84-194 67-183 (280)
No 1
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=9.7e-59 Score=411.22 Aligned_cols=252 Identities=76% Similarity=1.243 Sum_probs=194.0
Q ss_pred CCCcccchhccCCCCcccccCCCCCCCCCCCCccccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 024687 1 MGKDVEVAEQQGGGGEFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCG 80 (264)
Q Consensus 1 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 80 (264)
|.||.|..+| +..+.||+++|++.+..+.+|.++++++|++++||+||++|+|++++++......... ..
T Consensus 24 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~------~~ 93 (304)
T 3cn5_A 24 MSKEVSEEAQ----AHQHGKDYVDPPPAPFFDLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVV------CG 93 (304)
T ss_dssp -----------------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCST------TC
T ss_pred HHHHhhcccc----ccccCCCccCCCcccccCccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCC------CC
Confidence 5677655211 2234599999999999999999999999999999999999999999987764432211 23
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCC
Q 024687 81 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG 160 (264)
Q Consensus 81 ~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~ 160 (264)
..+.+.+++++|+++++.+++++++||||+|||||+++++.|+++|.+++.|+++|++||++|+++++.++++.++..+.
T Consensus 94 ~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~ 173 (304)
T 3cn5_A 94 SVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGG 173 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTT
T ss_pred CCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999987776665
Q ss_pred CccccCCCCcchhhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHH
Q 024687 161 GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAA 240 (264)
Q Consensus 161 ~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~ 240 (264)
+.+.+.++++..++|+.|+++||+|+++|+.+.|+++..+.++.+.+.|+.||+++++++++.+++||++||||||||||
T Consensus 174 g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPa 253 (304)
T 3cn5_A 174 GANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAA 253 (304)
T ss_dssp TCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHH
T ss_pred cccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHH
Confidence 65656678899999999999999999999998887654432222348999999999999999999999999999999999
Q ss_pred HhhCCCCCCCccEEEEeecccc
Q 024687 241 VIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 241 i~~~~~~~w~~~wvywv~P~~~ 262 (264)
++++++..|+|+||||++|++.
T Consensus 254 l~~~~~~~w~~~WvywvgPiiG 275 (304)
T 3cn5_A 254 VIFNSNKVWDDQWIFWVGPFIG 275 (304)
T ss_dssp HHHCCHHHHHHTTHHHHHHHHH
T ss_pred HHHccCCCcCceEEEeehHHHH
Confidence 9976556899999999999863
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=4.7e-52 Score=370.55 Aligned_cols=230 Identities=37% Similarity=0.587 Sum_probs=190.9
Q ss_pred cccCCCCCCCCCCCC-----ccccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHH
Q 024687 18 SAKDYHDPPPAPLID-----FEELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFG 92 (264)
Q Consensus 18 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 92 (264)
.+++|.+|...|... .++...+++||++++||+|||+|+|++++++++.... .. ....+++.+++++|
T Consensus 23 ~~~~~~~~~~~ps~~~~~~~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~-~~------~~~~g~l~Iala~G 95 (340)
T 3iyz_A 23 GRDLYDDDDKDPSSRSIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-EN------PLPVDMVLISLCFG 95 (340)
T ss_pred CCCCCCCCCCCCcchhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-CC------CCCcchHHHHHHHH
Confidence 356776666655322 2344556899999999999999999999988754211 11 12346788999999
Q ss_pred HHHHHHHHHhhcccCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcch
Q 024687 93 GMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKG 172 (264)
Q Consensus 93 ~~l~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
+++++.+++++++||||+|||||+++++.|+++|.+++.|+++|++||++|+++++.++++.... ..+.+.+.++.+..
T Consensus 96 laV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~-~lg~~~~~~~~s~~ 174 (340)
T 3iyz_A 96 LSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAG 174 (340)
T ss_pred HHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcC-ceeeccCCCccCHH
Confidence 99999999999999999999999999999999999999999999999999999999998765321 22334456778899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCcc
Q 024687 173 TGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQ 252 (264)
Q Consensus 173 ~~f~~E~~~T~iL~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~ 252 (264)
++|+.|+++||+|+++|+.+.|+++... ..+.|+.||+++.+..+.++++||++||||||||||++.+ .|+|+
T Consensus 175 ~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~----~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~ 247 (340)
T 3iyz_A 175 HGLLVELIITFQLVFTIFASCDDKRTDV----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENH 247 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccCCc----ccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcE
Confidence 9999999999999999999988776432 3467999999998888888899999999999999999965 69999
Q ss_pred EEEEeecccc
Q 024687 253 VLQFFHYTIT 262 (264)
Q Consensus 253 wvywv~P~~~ 262 (264)
||||++|++.
T Consensus 248 WVywvgPiiG 257 (340)
T 3iyz_A 248 WIYWVGPIIG 257 (340)
T ss_pred eehhHHHHHH
Confidence 9999999863
No 3
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-51 Score=352.28 Aligned_cols=207 Identities=39% Similarity=0.632 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
++||++++||+||++|++++++++.+... ..+ ....+.+.+++++|+++++.+++++++||||+|||||++++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~-~~~------~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~ 74 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGG-TEK------PLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMV 74 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTT-TTS------CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCC------CCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHH
Confidence 57899999999999999999998774311 111 23446788999999999999999999999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcCCCCCC
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 199 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 199 (264)
+.|+++|++++.|+++|++|+++|+.++|.+++++... ..+.+.+.++.+..++|+.|+++||+|+++++.+.|+|+..
T Consensus 75 ~~g~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~-~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~ 153 (223)
T 3gd8_A 75 CTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTD 153 (223)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSC
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-ceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 99999999999999999999999999999998865432 22344556778899999999999999999999998877653
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeeccc
Q 024687 200 RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTI 261 (264)
Q Consensus 200 ~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~ 261 (264)
. ..+.|+.||+++.+.....++.||++||||||||||++.+ +|+|+||||++|++
T Consensus 154 ~----~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~ 208 (223)
T 3gd8_A 154 V----TGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPII 208 (223)
T ss_dssp C----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHH
T ss_pred c----cCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHH
Confidence 2 3468999999998877788889999999999999999975 79999999999986
No 4
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.1e-51 Score=357.83 Aligned_cols=211 Identities=28% Similarity=0.445 Sum_probs=174.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHH
Q 024687 37 GKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTF 116 (264)
Q Consensus 37 ~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTl 116 (264)
.+++++|++++||+||++|++++++++....... ....+++.+++++|+++++.+++++++||||+|||||+
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~--------~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTl 96 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP--------ELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSV 96 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT--------TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------CCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHH
Confidence 3456789999999999999999999875332211 12346888999999999999999999999999999999
Q ss_pred HHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhh--hhhcCCCc----cccCCCCcchhhHHHHHHHHHHHHHHHH
Q 024687 117 GLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSY--YNRYGGGA----NELADGYNKGTGLGAEIIGTFVLVYTVF 190 (264)
Q Consensus 117 a~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~f~~E~~~T~iL~~~il 190 (264)
++++.|+++|.+++.|+++|++||++|+++++.++++. ++..+... .+.+...+..++|+.|+++||+|+++++
T Consensus 97 a~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il 176 (256)
T 3llq_A 97 GLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVIL 176 (256)
T ss_dssp HHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998532 22111111 1122356888999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 191 SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
.+.|+++. +.+.|+.||+++.++.++.+++||++||||||||||++.+ +..|+++||||++|++.
T Consensus 177 ~~~d~~~~------~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~~WVy~vgPi~G 241 (256)
T 3llq_A 177 GSTHGRVP------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPIVG 241 (256)
T ss_dssp HHHSTTSC------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHHTTHHHHHHHHH
T ss_pred HhcCCCCC------ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccceeeeeeHHHHH
Confidence 99886643 3578999999999999999999999999999999999985 34577999999999863
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=1.6e-50 Score=357.76 Aligned_cols=214 Identities=37% Similarity=0.600 Sum_probs=181.8
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchh
Q 024687 34 EELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPA 113 (264)
Q Consensus 34 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPa 113 (264)
+|..+++++|++++||+||++|+|++++++....... . ....+.+.+++++|+++++.+++++++||||+|||
T Consensus 5 ~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~-~------~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPA 77 (301)
T 2zz9_A 5 KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSE-N------PLPVDMVLISLCFGLSIATMVQCFGHISGGHINPA 77 (301)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC--C------CCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-C------CCCcchHHHHHHHHHHHHHhhheeccCCcceeChH
Confidence 4566788999999999999999999998776433211 1 23446788999999999999999999999999999
Q ss_pred hHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 024687 114 VTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT 193 (264)
Q Consensus 114 vTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~ 193 (264)
||+++++.|+++|.+++.|+++|++||++|++++|.++++.... ..+.+.+.++.+..++|+.|+++||+|+++++.+.
T Consensus 78 VTla~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~-~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~ 156 (301)
T 2zz9_A 78 VTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASC 156 (301)
T ss_dssp HHHHHHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGG-TSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-ceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999865422 22344556778899999999999999999999988
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 194 DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
|+++... +.+.|+.||+++.+..+.++++||++||||||||||++.+ .|+++||||++|++.
T Consensus 157 d~~~~~~----~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiG 218 (301)
T 2zz9_A 157 DDKRTDV----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIG 218 (301)
T ss_dssp CSSSSCC----SSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHH
T ss_pred CCCCCCc----cchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHH
Confidence 8766432 3578999999998888888899999999999999999975 699999999999863
No 6
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1.6e-50 Score=355.47 Aligned_cols=211 Identities=30% Similarity=0.450 Sum_probs=176.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHH
Q 024687 38 KWSFYRAVIAEFIATLLFLYVTVLTVIG-YKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTF 116 (264)
Q Consensus 38 ~~~~~~~~~~EfigT~~lv~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTl 116 (264)
.++.+|++++||+||++|+|++++++.. ....... +......+.+.+++++|+++++.+++++++||||+|||||+
T Consensus 41 ~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~---~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 117 (279)
T 2w2e_A 41 VRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETP---DGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTL 117 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCG---GGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---ccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHH
Confidence 3577899999999999999999886421 1111000 00012345778999999999999999999999999999999
Q ss_pred HHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcCCC
Q 024687 117 GLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPK 196 (264)
Q Consensus 117 a~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~ 196 (264)
++++.|+++|++++.|+++|++||++|+++++.++++... ..+.+.++.+..++|+.|+++||+|+++++.+.+++
T Consensus 118 a~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~----~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~ 193 (279)
T 2w2e_A 118 ALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA----FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEK 193 (279)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC----CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccce----eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999999999999876541 233445577889999999999999999999987765
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 197 RSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 197 ~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
++. +.+.|+.||+++.+++++++++||++||||||||||++++ ..|+|+||||++|++.
T Consensus 194 ~~~-----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~--~~~~~~WVy~vgPiiG 252 (279)
T 2w2e_A 194 HRA-----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR--SFPNYHWIYWLGPILG 252 (279)
T ss_dssp STT-----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT--CCCTTTTHHHHHHHHH
T ss_pred CCC-----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc--cchhhhhHHHHHHHHH
Confidence 532 3589999999999999999999999999999999999985 3567999999999863
No 7
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=3.5e-50 Score=352.53 Aligned_cols=218 Identities=40% Similarity=0.652 Sum_probs=181.7
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchh
Q 024687 34 EELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPA 113 (264)
Q Consensus 34 ~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPa 113 (264)
+|.++++++|++++||+||++|+|++++++......... +...+...+.+.+++++|+++++.+++++++||||+|||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~--~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPA 80 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKS--NQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPA 80 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSS--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--ccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHH
Confidence 356678899999999999999999999987754321100 000112335788999999999999999999999999999
Q ss_pred hHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 024687 114 VTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT 193 (264)
Q Consensus 114 vTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~ 193 (264)
||+++++.|+++|.+++.|+++|++||++|+++++.++++... ...+.+...++.+..++|+.|+++|++|+++++.+.
T Consensus 81 VTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~ 159 (271)
T 1j4n_A 81 VTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPD-NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATT 159 (271)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTT-CCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc-cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999864321 122334455677889999999999999999999998
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeeccc
Q 024687 194 DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTI 261 (264)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~ 261 (264)
|+++... +.+.|+.||+++.+..+.++++||++||||||||||++.+ .|+|+||||++|++
T Consensus 160 d~~~~~~----~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP~~ 220 (271)
T 1j4n_A 160 DRRRRDL----GGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGPFI 220 (271)
T ss_dssp CSSCCCC----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHHHH
T ss_pred cccCCCc----cccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHHHH
Confidence 8766432 3589999999999888888889999999999999999964 79999999999986
No 8
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-50 Score=352.16 Aligned_cols=211 Identities=35% Similarity=0.547 Sum_probs=183.4
Q ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccch
Q 024687 33 FEELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINP 112 (264)
Q Consensus 33 ~~~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NP 112 (264)
.+|.++++++|++++||+||++|+|++++++.... . ...+.+.+++++|+++++.+++++++||||+||
T Consensus 3 ~~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~----~-------~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNP 71 (266)
T 3d9s_A 3 KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP----S-------ALPTILQIALAFGLAIGTLAQALGPVSGGHINP 71 (266)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCS----S-------SCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_pred hhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCCC----C-------CCccHHHHHHHHHHHHHHHHHHHcccCcceECH
Confidence 45777889999999999999999999999875311 1 123578899999999999999999999999999
Q ss_pred hhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 024687 113 AVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSA 192 (264)
Q Consensus 113 avTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~ 192 (264)
|||+++++.|+++|.+++.|+++|++||++|+++++.++++.... ..+.+.+.++.+..++|+.|+++||+|+++++.+
T Consensus 72 AVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~-~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~ 150 (266)
T 3d9s_A 72 AITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARG-NLAVNALNNNTTQGQAMVVELILTFQLALCIFAS 150 (266)
T ss_dssp HHHHHHHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccC-ceeeccCCccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999765322 2334445567788999999999999999999999
Q ss_pred cCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCc-cEEEEeecccc
Q 024687 193 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDD-QVLQFFHYTIT 262 (264)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~-~wvywv~P~~~ 262 (264)
.|+++... +.+.|+.||+++.++.+.++++||++||||||||||++.+ .|++ +||||++|++.
T Consensus 151 ~d~~~~~~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~G 214 (266)
T 3d9s_A 151 TDSRRTSP----VGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVG 214 (266)
T ss_dssp HCTTCCSC----CCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHH
T ss_pred hcccCCCc----cchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHH
Confidence 88766432 3578999999999999999999999999999999999975 7988 99999999863
No 9
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=2.2e-49 Score=346.08 Aligned_cols=209 Identities=34% Similarity=0.547 Sum_probs=181.3
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhh
Q 024687 35 ELGKWSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAV 114 (264)
Q Consensus 35 ~~~~~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPav 114 (264)
|.++++++|++++||+||++|++++++++... . ....+.+.+++++|+++++.+++++++||||+||||
T Consensus 3 e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~-----~------~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAV 71 (263)
T 2b6o_A 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRW-----A------PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAV 71 (263)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-----C------SSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C------CCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHH
Confidence 56778899999999999999999999887532 1 122357788999999999999999999999999999
Q ss_pred HHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcC
Q 024687 115 TFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATD 194 (264)
Q Consensus 115 Tla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~ 194 (264)
|+++++.|+++|.++++|+++|++||++|+.+++.++++.... ..+.+.+.++.+..++|+.|+++||+|+++++.+.|
T Consensus 72 Tla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d 150 (263)
T 2b6o_A 72 TFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYD 150 (263)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCS-SCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccc-ccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999865422 223444567788899999999999999999999988
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeecccc
Q 024687 195 PKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTIT 262 (264)
Q Consensus 195 ~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~~ 262 (264)
+++... ..+.|+.||+++.+++++.+++||++||||||||||++.+ .|+|+||||++|++.
T Consensus 151 ~~~~~~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~G 211 (263)
T 2b6o_A 151 ERRNGR----LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIG 211 (263)
T ss_dssp TTSCSS----CCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHH
T ss_pred ccCCCC----cccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHH
Confidence 766432 3578999999999999999999999999999999999975 799999999999863
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=8.4e-50 Score=343.56 Aligned_cols=206 Identities=27% Similarity=0.447 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHH
Q 024687 41 FYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL 120 (264)
Q Consensus 41 ~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~ 120 (264)
++|++++||+||++|++++++++....... ....+.+.+++++|+++++.+++++++||||+|||||+++++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~--------~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~ 75 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFP--------ELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWA 75 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCT--------TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCC--------CCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHH
Confidence 679999999999999999998875332111 123468889999999999999999999999999999999999
Q ss_pred ccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhh--hhhc-----CCCc-cccCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 024687 121 GRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSY--YNRY-----GGGA-NELADGYNKGTGLGAEIIGTFVLVYTVFSA 192 (264)
Q Consensus 121 ~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--~~~~-----~~~~-~~~~~~~~~~~~f~~E~~~T~iL~~~il~~ 192 (264)
.|+++|++++.|+++|++|+++|+.+++.++++. ++.. ..+. .+...+.+..++|+.|+++|++|+++++.+
T Consensus 76 ~g~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~ 155 (234)
T 2o9g_A 76 GGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGA 155 (234)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998743 2211 0111 112235788999999999999999999999
Q ss_pred cCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhCCCCCCCccEEEEeeccc
Q 024687 193 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQVLQFFHYTI 261 (264)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~~~~~w~~~wvywv~P~~ 261 (264)
.|+|+. +.+.|+.||+++.+++++.+++||++||||||||||++++ +..|+|+||||++|++
T Consensus 156 ~d~~~~------~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g-~~~~~~~Wv~~vgP~~ 217 (234)
T 2o9g_A 156 TDKFAP------AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQG-GWALEQLWFFWVVPIV 217 (234)
T ss_dssp TSTTSC------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-SHHHHSHHHHHHHHHH
T ss_pred cCCCCc------cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhC-CCCCceeeeeehHHhH
Confidence 885432 3589999999999999999999999999999999999985 3457799999999986
No 11
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=2e-49 Score=349.79 Aligned_cols=211 Identities=27% Similarity=0.388 Sum_probs=176.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
++++|++++||+||++|+|++++++......+ ...+.+.+++++|+++++.+++++++||||+|||||+++
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~---------~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~ 75 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAG---------ASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIAL 75 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC---------CCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHH
Confidence 45789999999999999999998876543321 122455689999999999999999999999999999999
Q ss_pred HHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcC-----------------CCccccCCCCcchhhHHHHHHH
Q 024687 119 FLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYG-----------------GGANELADGYNKGTGLGAEIIG 181 (264)
Q Consensus 119 ~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~f~~E~~~ 181 (264)
++.|+++|.+++.|+++|++||++|+++++.++++.++..+ ...+.+.++.+..++|+.|+++
T Consensus 76 ~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~ 155 (281)
T 1ldf_A 76 WLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVI 155 (281)
T ss_dssp HHHSCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999987654321 1122344567889999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhC----CC------CCCCc
Q 024687 182 TFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN----KE------KAWDD 251 (264)
Q Consensus 182 T~iL~~~il~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~----~~------~~w~~ 251 (264)
||+|+++++.+.|+++.... +.+.|+.||+++.+++++.+++||++||||||||||+++. ++ .+|.|
T Consensus 156 Tf~Lv~~il~~~d~~~~~~~---~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~ 232 (281)
T 1ldf_A 156 TAILMGLILALTDDGNGVPR---GPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPY 232 (281)
T ss_dssp HHHHHHHHHHHHCTTSSSCC---GGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCT
T ss_pred HHHHHHHHHHHhccCCCCcc---cchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCce
Confidence 99999999999887764321 3589999999999999999999999999999999999861 11 22338
Q ss_pred cEEEEeeccc
Q 024687 252 QVLQFFHYTI 261 (264)
Q Consensus 252 ~wvywv~P~~ 261 (264)
+||||++|++
T Consensus 233 ~WVy~vgPi~ 242 (281)
T 1ldf_A 233 FLVPLFGPIV 242 (281)
T ss_dssp THHHHHHHHH
T ss_pred eeHHhHHHHH
Confidence 9999999986
No 12
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=5.2e-49 Score=343.22 Aligned_cols=211 Identities=19% Similarity=0.275 Sum_probs=175.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
++++|++++||+||++|+|++++++......+ ...+.+.+++++|+++++.+++++++||||+|||||+++
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~---------~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~ 77 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTG---------LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGL 77 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---------STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC---------CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHH
Confidence 56789999999999999999998776433211 123578899999999999999999999999999999999
Q ss_pred HHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCC----ccccCCCCcchhhHHHHHHHHHHHHHHHHHhcC
Q 024687 119 FLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGG----ANELADGYNKGTGLGAEIIGTFVLVYTVFSATD 194 (264)
Q Consensus 119 ~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~ 194 (264)
++.|+++|++++.|+++|++||++|+++++.++++.++..+.. ........+..++|+.|+++|++|+++++.+.|
T Consensus 78 ~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d 157 (258)
T 3c02_A 78 SSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVD 157 (258)
T ss_dssp HHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999998876543211 112223445567999999999999999999988
Q ss_pred CCCCCCCCCCCCch-hHHHHHHHHHHHHHhhCCCCCcccccchhHHHHhhC---CCCCC----CccEEEEeeccc
Q 024687 195 PKRSARDSHVPVLA-PLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN---KEKAW----DDQVLQFFHYTI 261 (264)
Q Consensus 195 ~~~~~~~~~~~~~~-~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i~~~---~~~~w----~~~wvywv~P~~ 261 (264)
+|++... +.+. |+.||+++.+++++.+++||++||||||||||++++ ++..| +|+||||++|++
T Consensus 158 ~~~~~~~---~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~ 229 (258)
T 3c02_A 158 ENICGKF---HILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCV 229 (258)
T ss_dssp HHHHCSC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHH
T ss_pred cccCCcc---cccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHH
Confidence 7654211 3578 999999999999999999999999999999999973 23344 679999999986
No 13
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=6e-48 Score=334.63 Aligned_cols=217 Identities=28% Similarity=0.359 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCCC-CC-CCC-----CCcchHHHHHHHHHHHHHHHHHhhcccCcccc
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYK-SQTDPNL-NT-DQC-----GGVGILGIAWAFGGMIFILVYCTAGISGGHIN 111 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~-~~~~~~~-~~-~~~-----~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~N 111 (264)
+++|++++||+||++|+|++++++.... ..+.+.. +. +.+ ...+++.+++++|+++++.+++++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4789999999999999999998876543 1111000 00 000 12245668999999999999999999999999
Q ss_pred hhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhh-cCCCccccCCCCcchhhHHHHHHHHHHHHHHHH
Q 024687 112 PAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNR-YGGGANELADGYNKGTGLGAEIIGTFVLVYTVF 190 (264)
Q Consensus 112 PavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il 190 (264)
||||+++++.|+++|++++.|+++|++|+++|+.+++.+++++... .....+.+.++.+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999999999873211 122333444678889999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCcccccchhHHHH--hh-CCCCCCCccEEEEeeccc
Q 024687 191 SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAV--IY-NKEKAWDDQVLQFFHYTI 261 (264)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~tG~~~NPAr~~gp~i--~~-~~~~~w~~~wvywv~P~~ 261 (264)
...++++.. +.+.|+.||+++.+++++.+++||++||||||||||+ .. +++.+|+|.|+||++|++
T Consensus 163 ~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~ 231 (246)
T 2f2b_A 163 GIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIV 231 (246)
T ss_dssp HHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHH
T ss_pred EEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHH
Confidence 876654432 3578999999999999999999999999999999999 44 456789999999999986
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.65 E-value=6.9e-16 Score=133.28 Aligned_cols=100 Identities=20% Similarity=0.285 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+.++.++.|+++|++|++.+++.....+.. ....++.+|+.++..++..+++||+|+|||+|+++
T Consensus 141 ~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~--------------~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp 206 (246)
T 2f2b_A 141 ISYWQAMLAEVVGTFLLMITIMGIAVDERAP--------------KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGP 206 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC--------------TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHheeeEEecCCCCC--------------CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHH
Confidence 3567899999999999999988754321111 01258899999999999999999999999999999
Q ss_pred HH-----ccCCccchhhHHhhhhhhHHHHHHHHHHhhhh
Q 024687 119 FL-----GRKVSLIRALLYMVAQCLGAICGCGFVKAFQK 152 (264)
Q Consensus 119 ~~-----~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (264)
.+ .++..|.+.|+||++|++|+++|+++.+.+++
T Consensus 207 ~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 207 YLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 98 34667899999999999999999999887753
No 15
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.41 E-value=7.7e-13 Score=115.87 Aligned_cols=103 Identities=17% Similarity=0.205 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+..+.++.|+++||+|++++++.....+. .....++.+|+.+..+.+..++.||+.+|||+++++
T Consensus 166 ~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--------------~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GP 231 (279)
T 2w2e_A 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKHR--------------ATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGP 231 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSCST--------------TGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCCC--------------CcCcHHHHHHHHHHHHHHhcccccccccChHHHHHH
Confidence 356788999999999999988765432111 011257889999999999999999999999999999
Q ss_pred HHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhh
Q 024687 119 FLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYY 155 (264)
Q Consensus 119 ~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~ 155 (264)
.+....-+.+.|+||++|++|+++|+++.+.+...++
T Consensus 232 al~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~ 268 (279)
T 2w2e_A 232 AVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNY 268 (279)
T ss_dssp HHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 9987644567999999999999999999988875544
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.40 E-value=6.4e-13 Score=114.85 Aligned_cols=98 Identities=23% Similarity=0.291 Sum_probs=80.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+..+.++.|+++|++|++.+++... .+.. .. ..++.+|+.+..+.+..++.||+.+|||+++++
T Consensus 155 ~s~~~~f~~E~i~Tf~Lv~~il~~~d-~~~~----------~~----~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGP 219 (256)
T 3llq_A 155 YSLVSALLIEIILTAFFLIVILGSTH-GRVP----------AG----FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQ 219 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHS-TTSC----------TT----CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcC-CCCC----------cc----chhHHHHHHHHHHHHHhccccccccChHHHHHH
Confidence 46788999999999999998776432 1110 11 247888999998999999999999999999999
Q ss_pred HHc-cCCccchhhHHhhhhhhHHHHHHHHHHhhh
Q 024687 119 FLG-RKVSLIRALLYMVAQCLGAICGCGFVKAFQ 151 (264)
Q Consensus 119 ~~~-g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 151 (264)
.+. |...|.+.|+||++|++|+++|+++.+.+.
T Consensus 220 al~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 220 ALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 986 444577899999999999999999988774
No 17
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.39 E-value=8.4e-13 Score=113.04 Aligned_cols=100 Identities=18% Similarity=0.220 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+.++.++.|+++|++|++.+++... ++. . .. ..++.+|+.+..+.+..++.||+.+|||+++++
T Consensus 132 ~~~~~~~~~E~i~T~~Lv~~i~~~~d--~~~-~--------~~----~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGP 196 (234)
T 2o9g_A 132 YSMLSALVVELVLSAGFLLVIHGATD--KFA-P--------AG----FAPIAIGLACTLIHLISIPVTNTSVNPARSTAV 196 (234)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTS--TTS-C--------TT----CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcC--CCC-c--------cc----hHHHHHHHHHHHHHHHccCCCccccChHHHHHH
Confidence 45778999999999999998876532 111 0 11 257889999999999999999999999999999
Q ss_pred HHcc-CCccchhhHHhhhhhhHHHHHHHHHHhhhhh
Q 024687 119 FLGR-KVSLIRALLYMVAQCLGAICGCGFVKAFQKS 153 (264)
Q Consensus 119 ~~~g-~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (264)
.+.. ...|.+.|+||++|++|+++|+++.+.++.+
T Consensus 197 al~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 197 AIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 9864 4467799999999999999999998887643
No 18
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.38 E-value=2e-12 Score=112.48 Aligned_cols=100 Identities=22% Similarity=0.215 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+..+.++.|+++|++|++.+++... .++... .. ..++.+|+.+..+....++.||+.+|||+++++.
T Consensus 126 s~~~~~~~E~i~Tf~Lv~~il~~~d-~~~~~~--------~~----~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa 192 (263)
T 2b6o_A 126 SVGQATIVEIFLTLQFVLCIFATYD-ERRNGR--------LG----SVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPA 192 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSC-TTSCSS--------CC----CHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCC--------cc----cHHHHHHHHHHHHHHhccCCCcccccHHHHHHHH
Confidence 4578999999999999998876521 111100 11 1477888888888899999999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhhhh
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKS 153 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (264)
+... .|.+.|+||++|++|+++|+++.+.++.+
T Consensus 193 l~~~-~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 225 (263)
T 2b6o_A 193 ILTR-NFTNHWVYWVGPVIGAGLGSLLYDFLLFP 225 (263)
T ss_dssp HHHT-CCTTCTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHcC-CccceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9765 78899999999999999999999887653
No 19
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.37 E-value=3e-12 Score=111.40 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+..+.++.|+++|++|++.+++... .++... .. ..++.+|+.+.+.....++.||+.+|||+++++.
T Consensus 128 s~~~~~~~E~i~Tf~Lv~~il~~~d-~~~~~~--------~~----~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa 194 (266)
T 3d9s_A 128 TQGQAMVVELILTFQLALCIFASTD-SRRTSP--------VG----SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPA 194 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC-TTCCSC--------CC----CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCc--------cc----hHHHHHHHHHHHHHHHhhccccccccHHHHHHHH
Confidence 4678899999999999999887632 111100 11 1477888888888888889999999999999999
Q ss_pred HccCCccch-hhHHhhhhhhHHHHHHHHHHhhhhh
Q 024687 120 LGRKVSLIR-ALLYMVAQCLGAICGCGFVKAFQKS 153 (264)
Q Consensus 120 ~~g~~~~~~-~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (264)
+... .|.+ .|+||++|++|+++|+++.+.++.+
T Consensus 195 l~~~-~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 228 (266)
T 3d9s_A 195 VVMN-RFSPAHWVFWVGPIVGAVLAAILYFYLLFP 228 (266)
T ss_dssp HHHT-CCCTTHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHcC-CcccCEeeeehHHHHHHHHHHHHHHHHhCC
Confidence 9765 7888 9999999999999999999888654
No 20
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.33 E-value=5e-12 Score=111.61 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+..+.++.|+++||+|++.+++.... ++... .. ..++++|+.+.+.....++.||+.+|||+++++
T Consensus 132 ~s~~~~f~~E~i~Tf~Lv~~Il~~~d~-~~~~~--------~~----~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GP 198 (301)
T 2zz9_A 132 LTAGHGLLVELIITFQLVFTIFASCDD-KRTDV--------TG----SVALAIGFSVAIGHLFAINYTGASMNPARSFGP 198 (301)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCS-SSSCC--------SS----CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCC-CCCCc--------cc----hHhHHHHHHHHHHHHHhcCCcccccCcHHHHHH
Confidence 356789999999999999988765321 11100 11 146788888877777777899999999999999
Q ss_pred HHccCCccchhhHHhhhhhhHHHHHHHHHHhhhh
Q 024687 119 FLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQK 152 (264)
Q Consensus 119 ~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (264)
.+... .|.+.|+||++|++|+++|+++.+.++.
T Consensus 199 al~~~-~w~~~WVy~vgPiiGailaa~ly~~l~~ 231 (301)
T 2zz9_A 199 AVIMG-NWENHWIYWVGPIIGAVLAGALYEYVFC 231 (301)
T ss_dssp HHHHC-CCTTTTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHhC-CCcceeeeeeHHHHHHHHHHHHHHHHhC
Confidence 99864 7999999999999999999999988864
No 21
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.32 E-value=6.5e-12 Score=106.73 Aligned_cols=98 Identities=21% Similarity=0.277 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+..+.++.|+++|++|++.+++.... ++... ... .++.+|+.+.+.....++.||+.+|||+++++.
T Consensus 124 s~~~~~~~E~i~Tf~Lv~~i~~~~~~-~~~~~--------~~~----~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~ 190 (223)
T 3gd8_A 124 TAGHGLLVELIITFQLVFTIFASCDS-KRTDV--------TGS----IALAIGFSVAIGHLFAINYTGASMNPARSFGPA 190 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCT-TCSCC--------CSC----HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcc-ccCCc--------cCC----ccHHHHHHHHHHHHhccCCccccccHHHHHHHH
Confidence 46688999999999999988765321 11110 111 367777777666666668999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhh
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQ 151 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~ 151 (264)
+... .|.+.|+||+++++|+++|+++.+.++
T Consensus 191 l~~~-~w~~~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 191 VIMG-NWENHWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp HHHT-CCTTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhc-CCCcEEeehhHHHHHHHHHHHHHHHHc
Confidence 9765 799999999999999999999987765
No 22
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.32 E-value=1.4e-12 Score=115.40 Aligned_cols=106 Identities=20% Similarity=0.251 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHH
Q 024687 39 WSFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL 118 (264)
Q Consensus 39 ~~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~ 118 (264)
.+..+.++.|+++||+|+++++.... .++.... .......++.+|+.++.+.+..++.||+.+|||+++++
T Consensus 182 ~s~~~~f~~E~i~TfiLv~~Il~~~d-~~~~~~~--------~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GP 252 (304)
T 3cn5_A 182 YNKGTALGAEIIGTFVLVYTVFSATD-PKRSARD--------SHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGA 252 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTEE-EEEESTT--------SCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhheec-CccCCCC--------cccccchHHHHHHHHHHHHHhccCCCccccChHHHHHH
Confidence 35678999999999999998884322 1111100 00011147888999999999999999999999999999
Q ss_pred HHc--cCCccchhhHHhhhhhhHHHHHHHHHHhhhhh
Q 024687 119 FLG--RKVSLIRALLYMVAQCLGAICGCGFVKAFQKS 153 (264)
Q Consensus 119 ~~~--g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (264)
.+. +...|.+.|+||++|++|+++|+++.+.++.+
T Consensus 253 al~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 253 AVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp HHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 987 23478999999999999999999998887653
No 23
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.31 E-value=5.6e-12 Score=112.43 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+..+.++.|+++||+|++.+++..... .... . + ..++++|+.+.+.....++.||+.+|||+++++.
T Consensus 172 s~~~~f~~E~i~Tf~Lv~~Ila~~d~~-~~~~--------~--~--~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPa 238 (340)
T 3iyz_A 172 TAGHGLLVELIITFQLVFTIFASCDDK-RTDV--------T--G--SVALAIGFSVAIGHLFAINYTGASMNPARSFGPA 238 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhcCc-cCCc--------c--c--chhhHHHHHHHHHHHhccCCccccccHHHHHHHH
Confidence 567899999999999999887653211 1100 0 1 1367778777666666678999999999999999
Q ss_pred HccCCccchhhHHhhhhhhHHHHHHHHHHhhhh
Q 024687 120 LGRKVSLIRALLYMVAQCLGAICGCGFVKAFQK 152 (264)
Q Consensus 120 ~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 152 (264)
+... .|.+.|+||+++++|+++|+++...++.
T Consensus 239 l~~~-~w~~~WVywvgPiiGailaallY~~l~~ 270 (340)
T 3iyz_A 239 VIMG-NWENHWIYWVGPIIGAVLAGALYEYVFC 270 (340)
T ss_pred HHcc-CCCcEeehhHHHHHHHHHHHHHHHHHhC
Confidence 9754 6889999999999999999999988874
No 24
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.29 E-value=9.5e-12 Score=109.25 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHH
Q 024687 40 SFYRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLF 119 (264)
Q Consensus 40 ~~~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~ 119 (264)
+.++.++.|+++||+|++.+++.... ++... .....++.+|+.+..+.+..++.||+.+|||+++++.
T Consensus 144 s~~~~~~~E~i~Tf~Lv~~il~~~d~-~~~~~-----------~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa 211 (281)
T 1ldf_A 144 NFVQAFAVEMVITAILMGLILALTDD-GNGVP-----------RGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPK 211 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCT-TSSSC-----------CGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCc-----------ccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHH
Confidence 57789999999999999998875421 11100 0112588899999999999999999999999999998
Q ss_pred Hcc------CCccc------hhhHHhhhhhhHHHHHHHHHHhhhhhh
Q 024687 120 LGR------KVSLI------RALLYMVAQCLGAICGCGFVKAFQKSY 154 (264)
Q Consensus 120 ~~g------~~~~~------~~~~yi~aQ~lGa~~g~~~~~~~~~~~ 154 (264)
+.. ...|. +.|+||++|++|+++|+++.+.++.++
T Consensus 212 l~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 212 VFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp HHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCcc
Confidence 853 22333 699999999999999999998887643
No 25
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.27 E-value=1.7e-11 Score=106.40 Aligned_cols=103 Identities=21% Similarity=0.252 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHc
Q 024687 42 YRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLG 121 (264)
Q Consensus 42 ~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~~ 121 (264)
.+.++.|+++|++|++.+++.... ++.... ..+.+++.+|+.+..+.+..++.||+.+|||+++++.+.
T Consensus 135 ~~~~~~E~i~Tf~Lv~~i~~~~d~-~~~~~~----------~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~ 203 (258)
T 3c02_A 135 TGAFFNELILTGILLLVILVVVDE-NICGKF----------HILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFL 203 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCH-HHHCSC----------CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCc-ccCCcc----------cccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHH
Confidence 358999999999999998875421 111000 122238899999999999999999999999999999986
Q ss_pred cC-----Ccc----chhhHHhhhhhhHHHHHHHHHHhhhhhhh
Q 024687 122 RK-----VSL----IRALLYMVAQCLGAICGCGFVKAFQKSYY 155 (264)
Q Consensus 122 g~-----~~~----~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~ 155 (264)
.. ..| .+.|+||++|++|+++|+++.+.++.++.
T Consensus 204 ~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~~ 246 (258)
T 3c02_A 204 SLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPLV 246 (258)
T ss_dssp HHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhcccC
Confidence 42 245 45899999999999999999988876543
No 26
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.25 E-value=1.7e-11 Score=107.10 Aligned_cols=98 Identities=19% Similarity=0.197 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHc
Q 024687 42 YRAVIAEFIATLLFLYVTVLTVIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLG 121 (264)
Q Consensus 42 ~~~~~~EfigT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~l~~~i~~~~~iSGah~NPavTla~~~~ 121 (264)
.+.++.|+++|++|++.+++... .++... .. ..++.+|+.+.+.....++.||+.+|||+++++.+.
T Consensus 138 ~~~~~~E~i~T~~Lv~~i~~~~d-~~~~~~--------~~----~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~ 204 (271)
T 1j4n_A 138 GQGLGIEIIGTLQLVLCVLATTD-RRRRDL--------GG----SGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI 204 (271)
T ss_dssp TGGGHHHHHHHHHHHHHHHHHTC-SSCCCC--------CS----CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc-ccCCCc--------cc----cHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHH
Confidence 46788999999999998876432 111100 11 147788888876666667899999999999999987
Q ss_pred cCCccchhhHHhhhhhhHHHHHHHHHHhhhhh
Q 024687 122 RKVSLIRALLYMVAQCLGAICGCGFVKAFQKS 153 (264)
Q Consensus 122 g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~ 153 (264)
.. .|.+.|+||+++++|+++|+++.+.++.+
T Consensus 205 ~~-~~~~~wv~~vgP~~Ga~la~~~y~~~~~~ 235 (271)
T 1j4n_A 205 TH-NFQDHWIFWVGPFIGAALAVLIYDFILAP 235 (271)
T ss_dssp TT-CCTTTTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred hC-CCcceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 64 68899999999999999999998887653
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=63.82 E-value=69 Score=27.32 Aligned_cols=107 Identities=10% Similarity=0.085 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhcc-cCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhh--hhhhhcCC
Q 024687 84 ILGIAWAFGGMIFILVYCTAGI-SGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQK--SYYNRYGG 160 (264)
Q Consensus 84 ~~~~~~~~g~~l~~~i~~~~~i-SGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~--~~~~~~~~ 160 (264)
.+..++.+.+.+.+.++.-+.. +| |--.+ ...+.+|.+|.+.+--|.-=.+|=++|++++-.+.. ......++
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg---n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 143 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS---TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANG 143 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT---THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc---chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCch
Confidence 4445666666666555554443 33 32233 335678888887776666666666666665544421 11110000
Q ss_pred C-------ccccCCCCcchhhHHHHHHHHHHHHHHHHHhcC
Q 024687 161 G-------ANELADGYNKGTGLGAEIIGTFVLVYTVFSATD 194 (264)
Q Consensus 161 ~-------~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~ 194 (264)
. ....+.+.+..+.|+-=.+|-++.++.++....
T Consensus 144 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~~ 184 (285)
T 3kcu_A 144 QWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYS 184 (285)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 001123456778888889999998888886543
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=45.22 E-value=2 Score=37.84 Aligned_cols=22 Identities=32% Similarity=0.511 Sum_probs=17.6
Q ss_pred hhcccCcccchhhHHHHHHccC
Q 024687 102 TAGISGGHINPAVTFGLFLGRK 123 (264)
Q Consensus 102 ~~~iSGah~NPavTla~~~~g~ 123 (264)
.++=||||++||++++-.+..+
T Consensus 8 ~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHT
T ss_pred EcCCCHHHHHHHHHHHHHHHhC
Confidence 3445789999999999988654
No 29
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=43.98 E-value=1.3e+02 Score=25.34 Aligned_cols=107 Identities=11% Similarity=0.085 Sum_probs=60.4
Q ss_pred chHHHHHHHHHHHHHHHHHhhcc-cCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhhhhhhhcCCC
Q 024687 83 GILGIAWAFGGMIFILVYCTAGI-SGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGG 161 (264)
Q Consensus 83 g~~~~~~~~g~~l~~~i~~~~~i-SGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~ 161 (264)
..+..++.+.+.+.+.++.-+.. +| |-.......+.++.+|.+.+--|.-=.+|=++|++++-.+....- ..+.+
T Consensus 63 ~~ll~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg-~~~~~ 138 (268)
T 3tds_E 63 TKIVMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTG-LVDKG 138 (268)
T ss_dssp HHHHHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TTSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cCCCc
Confidence 34445666665555554433332 22 433333445788899988877777777777777776555442110 00011
Q ss_pred c--------cccCCCCcchhhHHHHHHHHHHHHHHHHHhc
Q 024687 162 A--------NELADGYNKGTGLGAEIIGTFVLVYTVFSAT 193 (264)
Q Consensus 162 ~--------~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~ 193 (264)
. ...+...+..+.|+-=.+|-++..+.++...
T Consensus 139 ~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~ 178 (268)
T 3tds_E 139 PVAEFFANTAASKASMPFTALFFRGILCNILVCVSVLCSF 178 (268)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0011234567788888888888888887544
No 30
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=37.75 E-value=1.9e+02 Score=24.50 Aligned_cols=106 Identities=11% Similarity=0.116 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhc-ccCcccchhhHHHHHHccCCccchhhHHhhhhhhHHHHHHHHHHhhhh--hhhhhcCC
Q 024687 84 ILGIAWAFGGMIFILVYCTAG-ISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQK--SYYNRYGG 160 (264)
Q Consensus 84 ~~~~~~~~g~~l~~~i~~~~~-iSGah~NPavTla~~~~g~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~--~~~~~~~~ 160 (264)
.+..++.+.+.+.+.++.-+. .+|--+ .++ ..+.+|.+|.+.+--|.-=.+|=++|++++-.+.. .... .+.
T Consensus 67 ~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~-~~~ 141 (280)
T 3kly_A 67 KLLGGLAFSLGLILVVITGGELFTSSVL---ILV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFM-EDG 141 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGG-TTT
T ss_pred HHHHHHHHHHHHHHHHHccccccccchH---HHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc-CCc
Confidence 444566676666655555544 344333 222 24578888888877776666777777666554431 1111 001
Q ss_pred C--------ccccCCCCcchhhHHHHHHHHHHHHHHHHHhcC
Q 024687 161 G--------ANELADGYNKGTGLGAEIIGTFVLVYTVFSATD 194 (264)
Q Consensus 161 ~--------~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~ 194 (264)
+ ....+.+.+..+.|+-=.+|-++.++.++....
T Consensus 142 ~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~~ 183 (280)
T 3kly_A 142 GQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFS 183 (280)
T ss_dssp THHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 001123456778888889999998888886544
Done!