Query 024688
Match_columns 264
No_of_seqs 114 out of 1109
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 12:41:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024688.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024688hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a65a1 f.54.1.1 (A:5-513) Na( 34.1 1.2E+02 0.0089 25.1 21.8 108 29-142 5-117 (509)
2 d1jb0l_ f.31.1.1 (L:) Photosys 21.1 1.2E+02 0.0091 20.9 6.8 26 224-249 122-148 (151)
3 d1k3ka_ f.1.4.1 (A:) Bcl-2 hom 11.8 90 0.0066 21.6 3.4 22 95-116 67-91 (146)
4 d1g5ma_ f.1.4.1 (A:) Bcl-2 {Hu 11.1 1.5E+02 0.011 20.7 4.5 20 95-114 85-106 (164)
5 d1pq1a_ f.1.4.1 (A:) Apoptosis 10.8 1.5E+02 0.011 21.4 4.5 19 95-113 121-141 (196)
6 d1zy3a1 f.1.4.1 (A:1-170) Apop 10.0 1.7E+02 0.012 20.5 4.5 19 95-113 76-96 (170)
7 d1q90g_ f.23.26.1 (G:) PetG su 7.6 1.2E+02 0.0084 14.7 1.7 15 57-71 7-21 (30)
8 d2r6gf1 e.70.1.1 (F:13-260) Ma 7.5 2.9E+02 0.021 20.5 5.2 28 46-73 15-42 (248)
9 d1sfea1 a.4.2.1 (A:93-176) Ada 7.3 1.7E+02 0.012 17.9 3.0 16 93-108 19-34 (84)
10 d2jm6b1 f.1.4.1 (B:147-308) EA 7.2 2.6E+02 0.019 19.0 4.5 21 96-116 80-103 (162)
No 1
>d2a65a1 f.54.1.1 (A:5-513) Na(+):neurotransmitter symporter homologue LeuT {Aquifex aeolicus [TaxId: 63363]}
Probab=34.05 E-value=1.2e+02 Score=25.10 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=65.9
Q ss_pred CchHHHHHHHHhhhhhhh-hhhHHHHHHhhC----hhHHHHHHHHHHHHHHHHHHHHHHcchhccccCcccccHHHHHHH
Q 024688 29 GEWWHAGFHLTTAIVGPT-ILTLPYVFRGLG----WGLGFTCLTVMGFVTFYSYYLMSKVLDHCEKAGRRHIRFRELAAD 103 (264)
Q Consensus 29 ~s~~~a~~~l~~~~iG~G-iL~LP~a~~~~G----~v~g~i~l~~~~~~~~~s~~lL~~~~~~~~~~~~~~~sy~~l~~~ 103 (264)
+|..+-.+..++..+|.| +.-.||-..+-| .++=.++++++++=..+-=..+.|..++ . ....+..++..
T Consensus 5 ~s~~~fila~~g~avGlGNiWrFPyl~~~nGGgaFlipY~~~l~l~gvPll~lE~~lGq~~~~---g--~i~~~~~i~~~ 79 (509)
T d2a65a1 5 ATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGA---Q--GHGTTPAIFYL 79 (509)
T ss_dssp SCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---T--TCCSHHHHHHH
T ss_pred CChHHHHHHHHHHHhcccHHHhhhHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHcCCCCC---C--cccHHHHHHHH
Confidence 356677888889999976 556898875554 2222333333333333333344554443 2 23488888887
Q ss_pred HhCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhh
Q 024688 104 VLGSGWMFYFVIFIQTAINTGVGIGAILLAGECLQIMYS 142 (264)
Q Consensus 104 ~~G~~~g~~~~~i~i~~~~~g~~i~y~i~~~~~l~~~~~ 142 (264)
..+.|+. ..+....++.++..++-|.++.+-.+..++.
T Consensus 80 ~~~~~~~-~giG~~~~~~~~~i~~yy~vi~~w~l~Y~~~ 117 (509)
T d2a65a1 80 LWRNRFA-KILGVFGLWIPLVVAIYYVYIESWTLGFAIK 117 (509)
T ss_dssp HSCSHHH-HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCcch-hHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766544 4556666677777788888888776655443
No 2
>d1jb0l_ f.31.1.1 (L:) Photosystem I reaction center subunit XI, PsaL {Synechococcus elongatus [TaxId: 32046]}
Probab=21.08 E-value=1.2e+02 Score=20.88 Aligned_cols=26 Identities=4% Similarity=-0.164 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHh-ccCchHHHHHhccc
Q 024688 224 AFTSISIIAAIF-GNGILPEIQLQFLD 249 (264)
Q Consensus 224 ~~~~~~~~~faf-~~~~~~~i~~~m~~ 249 (264)
++..+|-..||| .-.++.-+..-||.
T Consensus 122 ~~Gg~GGa~fAy~Ll~n~~~~d~i~~g 148 (151)
T d1jb0l_ 122 FVGAMGSAFVAFFLLENFLVVDGIMTG 148 (151)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHT
T ss_pred hhccccHHHHHHHHHcchHHHHHHHHH
Confidence 468999999999 88888888877664
No 3
>d1k3ka_ f.1.4.1 (A:) Bcl-2 homolog {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=11.81 E-value=90 Score=21.56 Aligned_cols=22 Identities=18% Similarity=0.235 Sum_probs=15.6
Q ss_pred ccHHHHHHHHh--CC-chhHHHHHH
Q 024688 95 IRFRELAADVL--GS-GWMFYFVIF 116 (264)
Q Consensus 95 ~sy~~l~~~~~--G~-~~g~~~~~i 116 (264)
.+|.+++..+| |. +|||.++-+
T Consensus 67 ~~f~~V~~elF~DG~~NWGRIVaLf 91 (146)
T d1k3ka_ 67 DQLGLSMLQVSGDGNMNWGRALAIL 91 (146)
T ss_dssp HHHHTHHHHHCSSCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 37888999999 53 599555433
No 4
>d1g5ma_ f.1.4.1 (A:) Bcl-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.06 E-value=1.5e+02 Score=20.67 Aligned_cols=20 Identities=20% Similarity=0.466 Sum_probs=14.7
Q ss_pred ccHHHHHHHHh--CCchhHHHH
Q 024688 95 IRFRELAADVL--GSGWMFYFV 114 (264)
Q Consensus 95 ~sy~~l~~~~~--G~~~g~~~~ 114 (264)
.+|.++++.+| |.+|||.++
T Consensus 85 ~~f~~Va~elF~dginWGRIVa 106 (164)
T d1g5ma_ 85 GRFATVVEELFRDGVNWGRIVA 106 (164)
T ss_dssp HHHHHHHHHHTTSCCCHHHHHH
T ss_pred HHHHHHHHHHhccCCCHHHHHH
Confidence 37888999999 456995543
No 5
>d1pq1a_ f.1.4.1 (A:) Apoptosis regulator Bcl-xL {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.79 E-value=1.5e+02 Score=21.44 Aligned_cols=19 Identities=11% Similarity=0.359 Sum_probs=14.6
Q ss_pred ccHHHHHHHHhC--CchhHHH
Q 024688 95 IRFRELAADVLG--SGWMFYF 113 (264)
Q Consensus 95 ~sy~~l~~~~~G--~~~g~~~ 113 (264)
.+|.++++.+|. .+|||.+
T Consensus 121 ~~F~~V~~elF~dginWGRIV 141 (196)
T d1pq1a_ 121 QSFEQVVNELFRDGVNWGRIV 141 (196)
T ss_dssp HHHHHHHHHHTTTCCCHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHH
Confidence 379999999994 5699554
No 6
>d1zy3a1 f.1.4.1 (A:1-170) Apoptosis regulator Bcl-w {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.05 E-value=1.7e+02 Score=20.46 Aligned_cols=19 Identities=21% Similarity=0.621 Sum_probs=14.7
Q ss_pred ccHHHHHHHHh--CCchhHHH
Q 024688 95 IRFRELAADVL--GSGWMFYF 113 (264)
Q Consensus 95 ~sy~~l~~~~~--G~~~g~~~ 113 (264)
..|.++++.+| |.+|||.+
T Consensus 76 ~~f~~Va~elF~dginWGRIV 96 (170)
T d1zy3a1 76 QRFTQVSDELFQGGPNWGRLV 96 (170)
T ss_dssp HHHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHhcCCCcHHHHH
Confidence 48999999998 45699554
No 7
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=7.58 E-value=1.2e+02 Score=14.69 Aligned_cols=15 Identities=33% Similarity=0.552 Sum_probs=10.3
Q ss_pred hChhHHHHHHHHHHH
Q 024688 57 LGWGLGFTCLTVMGF 71 (264)
Q Consensus 57 ~G~v~g~i~l~~~~~ 71 (264)
+|+++|.+=..+.++
T Consensus 7 ~GivlGlipiTl~Gl 21 (30)
T d1q90g_ 7 CGIVLGLVPVTIAGL 21 (30)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HhHHHhhHHHHHHHH
Confidence 577777776666664
No 8
>d2r6gf1 e.70.1.1 (F:13-260) Maltose transport system permease protein MalF {Escherichia coli [TaxId: 562]}
Probab=7.52 E-value=2.9e+02 Score=20.50 Aligned_cols=28 Identities=7% Similarity=-0.038 Sum_probs=22.7
Q ss_pred hhhhHHHHHHhhChhHHHHHHHHHHHHH
Q 024688 46 TILTLPYVFRGLGWGLGFTCLTVMGFVT 73 (264)
Q Consensus 46 GiL~LP~a~~~~G~v~g~i~l~~~~~~~ 73 (264)
++.+.|..+++.-|.++.+++++..+++
T Consensus 15 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 42 (248)
T d2r6gf1 15 VGYLVVLMYAQGEYLFAITTLILSSAGL 42 (248)
T ss_dssp HHHTHHHHHGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHheE
Confidence 4557899999999999888888777665
No 9
>d1sfea1 a.4.2.1 (A:93-176) Ada DNA repair protein {Escherichia coli [TaxId: 562]}
Probab=7.31 E-value=1.7e+02 Score=17.94 Aligned_cols=16 Identities=13% Similarity=0.293 Sum_probs=12.1
Q ss_pred ccccHHHHHHHHhCCc
Q 024688 93 RHIRFRELAADVLGSG 108 (264)
Q Consensus 93 ~~~sy~~l~~~~~G~~ 108 (264)
+..||.|+++.+--++
T Consensus 19 ~v~TYg~iA~~~g~~~ 34 (84)
T d1sfea1 19 ETVSYQQLANAIGKPK 34 (84)
T ss_dssp CCEEHHHHHHHTTCTT
T ss_pred CeeeHHHHHHHhCCcc
Confidence 3569999998776553
No 10
>d2jm6b1 f.1.4.1 (B:147-308) EAT/MCL-1 (Myeloid cell leukemia sequence 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.19 E-value=2.6e+02 Score=19.04 Aligned_cols=21 Identities=14% Similarity=0.366 Sum_probs=15.1
Q ss_pred cHHHHHHHHhC--C-chhHHHHHH
Q 024688 96 RFRELAADVLG--S-GWMFYFVIF 116 (264)
Q Consensus 96 sy~~l~~~~~G--~-~~g~~~~~i 116 (264)
.|.++++.+|. . +|||.++-+
T Consensus 80 ~f~~Va~elf~dG~~NWGRIval~ 103 (162)
T d2jm6b1 80 SFSRVMVHVFKDGVTNWGRIVTLI 103 (162)
T ss_dssp HHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCchHHHHHHH
Confidence 68999999994 3 599554433
Done!