Your job contains 1 sequence.
>024694
MGDDKSTIVMASRERDRDRELLIPVADSGDESSKPSSSSSSSHHAGRETFSKVVRSWASK
KFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSVTFIFLIGVFM
SSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIRHPRIGEYA
FGFITSSVVLQNYSGEEELCCVYVPTNHLYIGDIFLINTKDVIRPNLSVREGIEIVVSGG
MSMPQILSTLETRMPLDGSRPDRR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024694
(264 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061668 - symbol:COV1 "AT2G20120" species:3702... 1064 1.3e-107 1
TAIR|locus:2061654 - symbol:LCV1 "AT2G20130" species:3702... 1029 6.7e-104 1
TAIR|locus:2018640 - symbol:LCV2 "AT1G43130" species:3702... 828 1.3e-82 1
UNIPROTKB|Q3AEZ4 - symbol:CHY_0429 "Putative uncharacteri... 293 6.6e-26 1
TIGR_CMR|CHY_0429 - symbol:CHY_0429 "conserved hypothetic... 293 6.6e-26 1
UNIPROTKB|Q5LRR3 - symbol:SPO2062 "Uncharacterized protei... 239 3.5e-20 1
TIGR_CMR|SPO_2062 - symbol:SPO_2062 "conserved hypothetic... 239 3.5e-20 1
UNIPROTKB|Q3Z7T7 - symbol:DET0989 "Putative uncharacteriz... 237 5.7e-20 1
TIGR_CMR|DET_0989 - symbol:DET_0989 "conserved hypothetic... 237 5.7e-20 1
UNIPROTKB|Q0C0Q5 - symbol:HNE_1988 "Putative uncharacteri... 229 4.0e-19 1
UNIPROTKB|Q83BF1 - symbol:CBU_1559 "Hypothetical membrane... 228 5.1e-19 1
TIGR_CMR|CBU_1559 - symbol:CBU_1559 "conserved hypothetic... 228 5.1e-19 1
UNIPROTKB|Q8EG72 - symbol:SO_1736 "Uncharacterized protei... 127 1.7e-06 1
TIGR_CMR|SO_1736 - symbol:SO_1736 "conserved hypothetical... 127 1.7e-06 1
UNIPROTKB|Q60CE1 - symbol:MCA0167 "Putative uncharacteriz... 122 6.6e-06 1
>TAIR|locus:2061668 [details] [associations]
symbol:COV1 "AT2G20120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009734 "auxin mediated signaling
pathway" evidence=IGI] [GO:0010222 "stem vascular tissue pattern
formation" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=IDA]
GO:GO:0016021 GO:GO:0005794 EMBL:CP002685 IPI:IPI00542783
RefSeq:NP_565464.2 UniGene:At.20924 PRIDE:F4IUE7
EnsemblPlants:AT2G20120.1 GeneID:816531 KEGG:ath:AT2G20120
OMA:GFLTANI GO:GO:0010222 InterPro:IPR007462 Pfam:PF04367
Uniprot:F4IUE7
Length = 268
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 202/258 (78%), Positives = 221/258 (85%)
Query: 1 MGDDKSTIVMASRERDRDRELLIPVADSGDEX-------XXXXXXXXXXHHAGRETFSKV 53
MGD+K IVMA+RERDR ELLIPVADSGD+ H + ET S
Sbjct: 1 MGDEKPVIVMANRERDR--ELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLF 58
Query: 54 VRSWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSVTFI 113
+R WASKKFMTGCVIL PIA+TFYITWWFIHFVDGFFSPIYAQLGI++FG GF+TS+ FI
Sbjct: 59 IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFI 118
Query: 114 FLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIRH 173
FL+GVFMSSWLGASVL+LGEWFIKRMPFVRHIYNASKQIS AISPDQNTQAFKEVAIIRH
Sbjct: 119 FLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRH 178
Query: 174 PRIGEYAFGFITSSVVLQNYSGEEELCCVYVPTNHLYIGDIFLINTKDVIRPNLSVREGI 233
PR+GEYAFGFITS+VVLQNY EEELCCVYVPTNHLYIGD+ L+N+ DVIRPNLSVREGI
Sbjct: 179 PRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGI 238
Query: 234 EIVVSGGMSMPQILSTLE 251
EIVVSGGMSMPQILST++
Sbjct: 239 EIVVSGGMSMPQILSTVD 256
>TAIR|locus:2061654 [details] [associations]
symbol:LCV1 "AT2G20130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005794 "Golgi apparatus" evidence=IDA]
GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006081
InterPro:IPR007462 Pfam:PF04367 EMBL:AY072447 EMBL:AY084942
EMBL:AY128911 IPI:IPI00548016 PIR:D84585 RefSeq:NP_565465.1
UniGene:At.48495 IntAct:Q8VY49 EnsemblPlants:AT2G20130.1
GeneID:816532 KEGG:ath:AT2G20130 TAIR:At2g20130 eggNOG:COG2928
HOGENOM:HOG000238507 InParanoid:Q8VY49 OMA:QTSKGAN PhylomeDB:Q8VY49
ProtClustDB:CLSN2688267 ArrayExpress:Q8VY49 Genevestigator:Q8VY49
Uniprot:Q8VY49
Length = 256
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 198/248 (79%), Positives = 212/248 (85%)
Query: 10 MASRERDRDRELLIPVADSGDEXX------XXXXXXXXXHHAGRETFSKVVRSWASKKFM 63
MA+RERDR ELLIPVAD GD+ H +G ET S +R WASKKFM
Sbjct: 1 MANRERDR--ELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFM 58
Query: 64 TGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSVTFIFLIGVFMSSW 123
TGCVIL PIAVTFY TWWFIHFVDGFFSPIYA LGI+IFG GF+TS+ FIFL+GVFMSSW
Sbjct: 59 TGCVILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSW 118
Query: 124 LGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIRHPRIGEYAFGF 183
LGASVL+LGEWFIKRMPFVRHIYNASKQIS AISPDQNTQAFKEVAIIRHPR+GEYAFGF
Sbjct: 119 LGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGF 178
Query: 184 ITSSVVLQNYSGEEELCCVYVPTNHLYIGDIFLINTKDVIRPNLSVREGIEIVVSGGMSM 243
ITS+VVLQNY EEELCCVYVPTNHLYIGDI L+N+ DVIRPNLSVREGIEIVVSGGMSM
Sbjct: 179 ITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSM 238
Query: 244 PQILSTLE 251
PQILSTL+
Sbjct: 239 PQILSTLD 246
>TAIR|locus:2018640 [details] [associations]
symbol:LCV2 "AT1G43130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0010222
"stem vascular tissue pattern formation" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
EMBL:CP002684 GO:GO:0005794 GO:GO:0005768 GO:GO:0005802
EMBL:AC026757 GO:GO:0010222 InterPro:IPR007462 Pfam:PF04367
ProtClustDB:CLSN2688267 EMBL:BT033158 EMBL:AK176692 EMBL:AK176760
IPI:IPI00521827 RefSeq:NP_564483.1 UniGene:At.39020 PRIDE:Q9C8C1
EnsemblPlants:AT1G43130.1 GeneID:840912 KEGG:ath:AT1G43130
TAIR:At1g43130 InParanoid:Q9C8C1 OMA:FVKHIYS PhylomeDB:Q9C8C1
ArrayExpress:Q9C8C1 Genevestigator:Q9C8C1 Uniprot:Q9C8C1
Length = 261
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 151/199 (75%), Positives = 177/199 (88%)
Query: 53 VVRSWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSVTF 112
V++SW SKKFMTG V+LFP+AVTF ITWWFI FVDGFFSPIY LG+DIFGLGFITSV F
Sbjct: 44 VLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGFITSVLF 103
Query: 113 IFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIR 172
F +G+F SSWLG++V LGE FI+RMPFV+HIY+ASKQIS AISPDQNT AFKEVAIIR
Sbjct: 104 TFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTTAFKEVAIIR 163
Query: 173 HPRIGEYAFGFITSSVVLQNYSGEEELCCVYVPTNHLYIGDIFLINTKDVIRPNLSVREG 232
HPRIGEYAFGFITSSV LQ GEEELC VYVPTNHLYIGD+FL++++++IRPNLS+REG
Sbjct: 164 HPRIGEYAFGFITSSVTLQTDHGEEELCSVYVPTNHLYIGDVFLVSSEEIIRPNLSIREG 223
Query: 233 IEIVVSGGMSMPQILSTLE 251
IEI+VS GM+MPQ++S ++
Sbjct: 224 IEIIVSVGMTMPQVISHVD 242
>UNIPROTKB|Q3AEZ4 [details] [associations]
symbol:CHY_0429 "Putative uncharacterized protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_359290.1 STRING:Q3AEZ4 GeneID:3727678 KEGG:chy:CHY_0429
PATRIC:21274019 BioCyc:CHYD246194:GJCN-430-MONOMER Uniprot:Q3AEZ4
Length = 211
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 72/208 (34%), Positives = 116/208 (55%)
Query: 45 AGRETFSKVVRSWASKKFMTGCVILFPIAVTFYITWWFIHFVD----GFFSPIYAQLGID 100
AGRE + + + F+TG ++ P A+T YI + F D GFF+ I+ GID
Sbjct: 2 AGREEGRDIFKKLGNY-FLTGLAVITPAAITIYILFALFSFFDRPLRGFFAQIF---GID 57
Query: 101 IFGLGFITSVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQ-ISAAISPD 159
I GLG +T + ++G+ ++++G +L E ++P R +Y SKQ I + P+
Sbjct: 58 IPGLGVLTVALLVPIVGMLATNFIGRKILKKFEQLFIKIPVTRSLYKTSKQLIETFLHPE 117
Query: 160 QNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQ-NYSGEEELCCVYVPTN-HLYIGDIFLI 217
++ AFK V + R+P+ G YA GFIT S + N E+L V++PT + G + +
Sbjct: 118 RD--AFKSVVLARYPKDGSYALGFITGSGFDEINEKTREKLLPVFLPTTPNPTSGWLLYL 175
Query: 218 NTKDVIRPNLSVREGIEIVVSGGMSMPQ 245
KD+I NLSV + ++I+VSGG+ P+
Sbjct: 176 PEKDIIPLNLSVEDALKIIVSGGIVQPE 203
>TIGR_CMR|CHY_0429 [details] [associations]
symbol:CHY_0429 "conserved hypothetical protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_359290.1 STRING:Q3AEZ4 GeneID:3727678 KEGG:chy:CHY_0429
PATRIC:21274019 BioCyc:CHYD246194:GJCN-430-MONOMER Uniprot:Q3AEZ4
Length = 211
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 72/208 (34%), Positives = 116/208 (55%)
Query: 45 AGRETFSKVVRSWASKKFMTGCVILFPIAVTFYITWWFIHFVD----GFFSPIYAQLGID 100
AGRE + + + F+TG ++ P A+T YI + F D GFF+ I+ GID
Sbjct: 2 AGREEGRDIFKKLGNY-FLTGLAVITPAAITIYILFALFSFFDRPLRGFFAQIF---GID 57
Query: 101 IFGLGFITSVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQ-ISAAISPD 159
I GLG +T + ++G+ ++++G +L E ++P R +Y SKQ I + P+
Sbjct: 58 IPGLGVLTVALLVPIVGMLATNFIGRKILKKFEQLFIKIPVTRSLYKTSKQLIETFLHPE 117
Query: 160 QNTQAFKEVAIIRHPRIGEYAFGFITSSVVLQ-NYSGEEELCCVYVPTN-HLYIGDIFLI 217
++ AFK V + R+P+ G YA GFIT S + N E+L V++PT + G + +
Sbjct: 118 RD--AFKSVVLARYPKDGSYALGFITGSGFDEINEKTREKLLPVFLPTTPNPTSGWLLYL 175
Query: 218 NTKDVIRPNLSVREGIEIVVSGGMSMPQ 245
KD+I NLSV + ++I+VSGG+ P+
Sbjct: 176 PEKDIIPLNLSVEDALKIIVSGGIVQPE 203
>UNIPROTKB|Q5LRR3 [details] [associations]
symbol:SPO2062 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR007462 Pfam:PF04367
HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:YP_167292.1 DNASU:3193433
GeneID:3193433 KEGG:sil:SPO2062 PATRIC:23377465
ProtClustDB:CLSK933739 Uniprot:Q5LRR3
Length = 224
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 55/194 (28%), Positives = 103/194 (53%)
Query: 62 FMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQ-------LGIDIFGLGFITSVTFIF 114
F+TG V++ P+ +T ++ W + +VD F P+ +GI++ G+G I + F
Sbjct: 24 FLTGIVVIAPVGLTIWLFWSVVGWVDSFVLPLVPHQFRPEQYIGINLRGVGVIFLLVFTI 83
Query: 115 LIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIRHP 174
++G +G S++ E + RMP VR +Y+ KQIS + Q ++F++ +I++P
Sbjct: 84 VVGWIAKGIIGRSLIQYAEGVVDRMPVVRSVYSGIKQISETVFA-QTERSFEQACLIQYP 142
Query: 175 RIGEYAFGFITSSV---VLQNYSGEEELCCVYVPTN-HLYIGDIFLINTKDVIRPNLSVR 230
R G +A GF++++ V L V+VPT + G + +DVI +++V
Sbjct: 143 RRGIWAIGFVSTTAKGEVADKAETGGRLMSVFVPTTPNPTSGFLLYFPEEDVIILDMTVE 202
Query: 231 EGIEIVVSGGMSMP 244
+ ++V+S G+ P
Sbjct: 203 DAAKLVISAGLVYP 216
>TIGR_CMR|SPO_2062 [details] [associations]
symbol:SPO_2062 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000031 GenomeReviews:CP000031_GR InterPro:IPR007462
Pfam:PF04367 HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:YP_167292.1
DNASU:3193433 GeneID:3193433 KEGG:sil:SPO2062 PATRIC:23377465
ProtClustDB:CLSK933739 Uniprot:Q5LRR3
Length = 224
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 55/194 (28%), Positives = 103/194 (53%)
Query: 62 FMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQ-------LGIDIFGLGFITSVTFIF 114
F+TG V++ P+ +T ++ W + +VD F P+ +GI++ G+G I + F
Sbjct: 24 FLTGIVVIAPVGLTIWLFWSVVGWVDSFVLPLVPHQFRPEQYIGINLRGVGVIFLLVFTI 83
Query: 115 LIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIRHP 174
++G +G S++ E + RMP VR +Y+ KQIS + Q ++F++ +I++P
Sbjct: 84 VVGWIAKGIIGRSLIQYAEGVVDRMPVVRSVYSGIKQISETVFA-QTERSFEQACLIQYP 142
Query: 175 RIGEYAFGFITSSV---VLQNYSGEEELCCVYVPTN-HLYIGDIFLINTKDVIRPNLSVR 230
R G +A GF++++ V L V+VPT + G + +DVI +++V
Sbjct: 143 RRGIWAIGFVSTTAKGEVADKAETGGRLMSVFVPTTPNPTSGFLLYFPEEDVIILDMTVE 202
Query: 231 EGIEIVVSGGMSMP 244
+ ++V+S G+ P
Sbjct: 203 DAAKLVISAGLVYP 216
>UNIPROTKB|Q3Z7T7 [details] [associations]
symbol:DET0989 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_181712.1 STRING:Q3Z7T7 GeneID:3229747 KEGG:det:DET0989
PATRIC:21609027 ProtClustDB:CLSK837182
BioCyc:DETH243164:GJNF-990-MONOMER Uniprot:Q3Z7T7
Length = 214
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 51/193 (26%), Positives = 100/193 (51%)
Query: 61 KFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIF-GLGFITSVTFIFLIGVF 119
+F+TG + PI + W + +DG P+ F GLG + ++ I+L+G+
Sbjct: 15 RFLTGLAFVLPIGAALGLLIWVFNIIDGLLKPVIEFFFNWYFPGLGLLVTLVLIYLVGLI 74
Query: 120 MSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIRHPRIGEY 179
+S++ G +L + + ++P +YN++KQ+ + N +FKE ++ PR G +
Sbjct: 75 LSNYFGKQILGWVDKILVKVPIFNQVYNSAKQVIETLGVS-NKVSFKEAVMVEFPRTGMH 133
Query: 180 AFGFITSSVVLQNYSGEEELCCVYVPTN-HLYIGDIFLINTKDVIRPNLSVREGIEIVVS 238
+ FIT+ N +GE+ L VYVP + + G + L+ + R N+SV + ++ ++S
Sbjct: 134 SLAFITNETT--NSAGEK-LYLVYVPGSPNPTSGFLELLRENQIERVNVSVEDAMKTLIS 190
Query: 239 GGMSMPQILSTLE 251
G+ P + ++
Sbjct: 191 CGLVFPDNVQAID 203
>TIGR_CMR|DET_0989 [details] [associations]
symbol:DET_0989 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_181712.1 STRING:Q3Z7T7 GeneID:3229747 KEGG:det:DET0989
PATRIC:21609027 ProtClustDB:CLSK837182
BioCyc:DETH243164:GJNF-990-MONOMER Uniprot:Q3Z7T7
Length = 214
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 51/193 (26%), Positives = 100/193 (51%)
Query: 61 KFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGIDIF-GLGFITSVTFIFLIGVF 119
+F+TG + PI + W + +DG P+ F GLG + ++ I+L+G+
Sbjct: 15 RFLTGLAFVLPIGAALGLLIWVFNIIDGLLKPVIEFFFNWYFPGLGLLVTLVLIYLVGLI 74
Query: 120 MSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIRHPRIGEY 179
+S++ G +L + + ++P +YN++KQ+ + N +FKE ++ PR G +
Sbjct: 75 LSNYFGKQILGWVDKILVKVPIFNQVYNSAKQVIETLGVS-NKVSFKEAVMVEFPRTGMH 133
Query: 180 AFGFITSSVVLQNYSGEEELCCVYVPTN-HLYIGDIFLINTKDVIRPNLSVREGIEIVVS 238
+ FIT+ N +GE+ L VYVP + + G + L+ + R N+SV + ++ ++S
Sbjct: 134 SLAFITNETT--NSAGEK-LYLVYVPGSPNPTSGFLELLRENQIERVNVSVEDAMKTLIS 190
Query: 239 GGMSMPQILSTLE 251
G+ P + ++
Sbjct: 191 CGLVFPDNVQAID 203
>UNIPROTKB|Q0C0Q5 [details] [associations]
symbol:HNE_1988 "Putative uncharacterized protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000158 GenomeReviews:CP000158_GR InterPro:IPR007462
Pfam:PF04367 eggNOG:COG2928 RefSeq:YP_760688.1 STRING:Q0C0Q5
GeneID:4290430 KEGG:hne:HNE_1988 PATRIC:32216819
HOGENOM:HOG000264416 OMA:KYIISMG
BioCyc:HNEP228405:GI69-2013-MONOMER Uniprot:Q0C0Q5
Length = 237
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 56/199 (28%), Positives = 101/199 (50%)
Query: 56 SWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIY-------AQLGIDIFGLGFIT 108
+W +F+ G +I PI TF I + I+ +D P+ L + G G I
Sbjct: 24 AWLRARFVAGMLIALPIVATFVILEFLINLIDSRVVPLLPPSLRPETYLDYAVPGFGLII 83
Query: 109 SVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEV 168
+ F+ L+G +++LG + L + + R+P VR +Y+ KQI + Q +KEV
Sbjct: 84 LILFLTLVGAVATNFLGKFFVDLTDRVLTRVPVVRSVYSVFKQIRDVFQNNTAGQ-YKEV 142
Query: 169 AIIRHPRIGEYAFGFITSSVV--LQNYSGEEELCCVYVPTN-HLYIGDIFLINTKDVIRP 225
A++ +PR G + GF+ + ++ GE + ++VPT + G + + ++R
Sbjct: 143 AMVEYPREGSWVIGFVAGPIKGEMRQRLGENFIG-IFVPTTPNPTSGFLLYVAEAKIVRL 201
Query: 226 NLSVREGIEIVVSGGMSMP 244
++SV EG +I+ SGG+ +P
Sbjct: 202 DMSVEEGAKIIFSGGLVVP 220
>UNIPROTKB|Q83BF1 [details] [associations]
symbol:CBU_1559 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR007462
Pfam:PF04367 HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:NP_820542.1
GeneID:1209469 KEGG:cbu:CBU_1559 PATRIC:17931881
ProtClustDB:CLSK914863 BioCyc:CBUR227377:GJ7S-1539-MONOMER
Uniprot:Q83BF1
Length = 209
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 59/197 (29%), Positives = 106/197 (53%)
Query: 55 RSWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFS--PIY---AQL-GIDIFGLGFIT 108
R + + + G ++ PI VTF + + + +DG P + QL G I GLG +
Sbjct: 8 RYFIRRYLIAGLLVWLPIWVTFIVIRFLVDLLDGTLKLLPYHYRPEQLFGHKIPGLGLVF 67
Query: 109 SVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEV 168
++ IFL G+ +++++G ++ E + R+P VR IY A KQ++ A Q Q+F++V
Sbjct: 68 TIIIIFLTGLLVTNFVGRYLIGWWERILARIPLVRSIYTAVKQVTHAFVQPQG-QSFRKV 126
Query: 169 AIIRHPRIGEYAFGFITSSVVLQNYSGEEELCCVYVPTN-HLYIGDIFLINTKDVIRPNL 227
+I +PR G ++ F+TS+ Q E++ V+VPT + G + + KDVI +
Sbjct: 127 VLIEYPRKGLWSIAFVTSNN-FQGLPFEDDALAVFVPTTPNPTSGFLMVTPKKDVIDLPV 185
Query: 228 SVREGIEIVVSGGMSMP 244
++ E +++S G+ P
Sbjct: 186 TIEEAFRMIISLGVVTP 202
>TIGR_CMR|CBU_1559 [details] [associations]
symbol:CBU_1559 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR007462
Pfam:PF04367 HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:NP_820542.1
GeneID:1209469 KEGG:cbu:CBU_1559 PATRIC:17931881
ProtClustDB:CLSK914863 BioCyc:CBUR227377:GJ7S-1539-MONOMER
Uniprot:Q83BF1
Length = 209
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 59/197 (29%), Positives = 106/197 (53%)
Query: 55 RSWASKKFMTGCVILFPIAVTFYITWWFIHFVDGFFS--PIY---AQL-GIDIFGLGFIT 108
R + + + G ++ PI VTF + + + +DG P + QL G I GLG +
Sbjct: 8 RYFIRRYLIAGLLVWLPIWVTFIVIRFLVDLLDGTLKLLPYHYRPEQLFGHKIPGLGLVF 67
Query: 109 SVTFIFLIGVFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEV 168
++ IFL G+ +++++G ++ E + R+P VR IY A KQ++ A Q Q+F++V
Sbjct: 68 TIIIIFLTGLLVTNFVGRYLIGWWERILARIPLVRSIYTAVKQVTHAFVQPQG-QSFRKV 126
Query: 169 AIIRHPRIGEYAFGFITSSVVLQNYSGEEELCCVYVPTN-HLYIGDIFLINTKDVIRPNL 227
+I +PR G ++ F+TS+ Q E++ V+VPT + G + + KDVI +
Sbjct: 127 VLIEYPRKGLWSIAFVTSNN-FQGLPFEDDALAVFVPTTPNPTSGFLMVTPKKDVIDLPV 185
Query: 228 SVREGIEIVVSGGMSMP 244
++ E +++S G+ P
Sbjct: 186 TIEEAFRMIISLGVVTP 202
>UNIPROTKB|Q8EG72 [details] [associations]
symbol:SO_1736 "Uncharacterized protein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR007462 Pfam:PF04367
RefSeq:NP_717346.1 DNASU:1169515 GeneID:1169515 KEGG:son:SO_1736
PATRIC:23523097 HOGENOM:HOG000294006 OMA:WLYGWIE
ProtClustDB:CLSK906400 Uniprot:Q8EG72
Length = 200
Score = 127 (49.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/204 (23%), Positives = 91/204 (44%)
Query: 60 KKFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGID--IFGLGFITSVTFIFLIG 117
K G + L P+A++ ++ W +DG I A +GI+ G GF+ V +F +G
Sbjct: 3 KTLARGLMNLLPMALSLWLFWSLFVSLDGLGIFILALVGINQHFVGAGFLLVVAIVFAVG 62
Query: 118 VFMSSWLGASVLSLGEWF---IKRMPFVRHIYNASKQISAAISPD--QNTQAFKEVAIIR 172
+ S + ++ L W + R P + +Y + + I++ ++ + NTQ + +++
Sbjct: 63 LLFSV---SPIVWLYGWIERQLMRFPLFKSVYGSIRDIASLMNREGKPNTQ---QTVLVK 116
Query: 173 HPRIGEYAFGFI---TSSVVLQNYSGEEELCCVYVPTNHLYIGDIFLINTKDVIRPNLSV 229
G Y GFI T L + E + V ++ G L+ D+I + S
Sbjct: 117 QAN-GGYVVGFIMTDTPPQPLLDALPEGDWVPVLFQLSYQMAGVTSLVKRDDLILVDWSF 175
Query: 230 REGIEIVVSGGMSMPQILSTLETR 253
E + ++ G+S S ++T+
Sbjct: 176 EEAMRFNLTAGISQTPSSSVVKTK 199
>TIGR_CMR|SO_1736 [details] [associations]
symbol:SO_1736 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR007462
Pfam:PF04367 RefSeq:NP_717346.1 DNASU:1169515 GeneID:1169515
KEGG:son:SO_1736 PATRIC:23523097 HOGENOM:HOG000294006 OMA:WLYGWIE
ProtClustDB:CLSK906400 Uniprot:Q8EG72
Length = 200
Score = 127 (49.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/204 (23%), Positives = 91/204 (44%)
Query: 60 KKFMTGCVILFPIAVTFYITWWFIHFVDGFFSPIYAQLGID--IFGLGFITSVTFIFLIG 117
K G + L P+A++ ++ W +DG I A +GI+ G GF+ V +F +G
Sbjct: 3 KTLARGLMNLLPMALSLWLFWSLFVSLDGLGIFILALVGINQHFVGAGFLLVVAIVFAVG 62
Query: 118 VFMSSWLGASVLSLGEWF---IKRMPFVRHIYNASKQISAAISPD--QNTQAFKEVAIIR 172
+ S + ++ L W + R P + +Y + + I++ ++ + NTQ + +++
Sbjct: 63 LLFSV---SPIVWLYGWIERQLMRFPLFKSVYGSIRDIASLMNREGKPNTQ---QTVLVK 116
Query: 173 HPRIGEYAFGFI---TSSVVLQNYSGEEELCCVYVPTNHLYIGDIFLINTKDVIRPNLSV 229
G Y GFI T L + E + V ++ G L+ D+I + S
Sbjct: 117 QAN-GGYVVGFIMTDTPPQPLLDALPEGDWVPVLFQLSYQMAGVTSLVKRDDLILVDWSF 175
Query: 230 REGIEIVVSGGMSMPQILSTLETR 253
E + ++ G+S S ++T+
Sbjct: 176 EEAMRFNLTAGISQTPSSSVVKTK 199
>UNIPROTKB|Q60CE1 [details] [associations]
symbol:MCA0167 "Putative uncharacterized protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE017282 GenomeReviews:AE017282_GR InterPro:IPR007462
Pfam:PF04367 RefSeq:YP_112704.1 GeneID:3103913 KEGG:mca:MCA0167
PATRIC:22604067 OMA:ILHESRI Uniprot:Q60CE1
Length = 195
Score = 122 (48.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 46/189 (24%), Positives = 88/189 (46%)
Query: 62 FMTGCVILFPIA----VTFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSVTFIFLIG 117
F+ G + + PI V Y+ FV FFS Y L I + F +V F+ G
Sbjct: 12 FLIGVLGVLPIVIVLQVVIYVENLLRDFVVSFFSS-YRNLFIP--SVMFTAAVLFLTYFG 68
Query: 118 VFMSSWLGASVLSLGEWFIKRMPFVRHIYNASKQISAAISPDQNTQAFKEVAIIRHPRIG 177
+ A +L E + R+P + +Y ++++ D +T+ +EV I +P+ G
Sbjct: 69 YLLQHGK-AHLLYFVEKLVIRIPLLGTLYRVTQKLVNIFRGDGSTK-LREVVYIEYPKEG 126
Query: 178 EYAFGFITSSVVLQNYSGEEELCCVYVPTN-HLYIGDIFLINTKDVIRPNLSVREGIEIV 236
+ F+T+ + G+ + +YVPT+ + G +++ + R ++++ E V
Sbjct: 127 LWVPAFVTNRI------GDRYV--IYVPTSPNPTSGFTVILHESRIKRSHMTIEEASSFV 178
Query: 237 VSGGMSMPQ 245
+S G+ MP+
Sbjct: 179 ISLGVDMPR 187
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.141 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 264 253 0.00083 114 3 11 22 0.38 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 616 (65 KB)
Total size of DFA: 192 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.71u 0.21s 18.92t Elapsed: 00:00:01
Total cpu time: 18.71u 0.21s 18.92t Elapsed: 00:00:01
Start: Mon May 20 17:42:26 2013 End: Mon May 20 17:42:27 2013