BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024696
(264 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359474160|ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
Length = 398
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/213 (87%), Positives = 202/213 (94%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+K+N + QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEE+LA LF+TCGQVVDCR+C
Sbjct: 186 RKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVC 245
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDER
Sbjct: 246 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDER 305
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMC+RTIYCTNIDKKV+Q D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF MAESAIA
Sbjct: 306 EMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIA 365
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
ALNCSG VLGSLPIRVSPSKTPVRPRAPR P+H
Sbjct: 366 ALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 398
>gi|297742454|emb|CBI34603.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/213 (87%), Positives = 202/213 (94%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+++N + QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEE+LA LF+TCGQVVDCR+C
Sbjct: 185 RRKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVC 244
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDER
Sbjct: 245 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDER 304
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMC+RTIYCTNIDKKV+Q D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF MAESAIA
Sbjct: 305 EMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIA 364
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
ALNCSG VLGSLPIRVSPSKTPVRPRAPR P+H
Sbjct: 365 ALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 397
>gi|225455232|ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
gi|302143972|emb|CBI23077.3| unnamed protein product [Vitis vinifera]
Length = 361
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/217 (87%), Positives = 202/217 (93%), Gaps = 1/217 (0%)
Query: 48 NTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
N +KRN Y+Q KRR+N RTS AQ++EVI+RTVYVSDIDQQVTEE LA LF+ CGQVVD
Sbjct: 146 NAGRRKRNNYNQ-KRRINSRTSMAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVD 204
Query: 108 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPRS
Sbjct: 205 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRS 264
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 227
EDEREMC+RTIYCTNIDKKVTQ ++KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAE
Sbjct: 265 EDEREMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAE 324
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
SAIAALNCSGA+LGSLPIRVSPSKTPVRPRAPRP LH
Sbjct: 325 SAIAALNCSGAILGSLPIRVSPSKTPVRPRAPRPALH 361
>gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [Ricinus communis]
gi|223528275|gb|EEF30325.1| RNA-binding protein, putative [Ricinus communis]
Length = 385
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/220 (83%), Positives = 204/220 (92%)
Query: 45 CLFNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 104
+ NT +K+N ++QG+RRMN RTS AQ+++VIRRTVYVSDIDQQVTEEQLA LF+ CGQ
Sbjct: 166 AIGNTIKRKKNSFNQGRRRMNTRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFVHCGQ 225
Query: 105 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 164
VVDCRICGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LGFYP+RVLPSKTAIAPVNPTFL
Sbjct: 226 VVDCRICGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGFYPLRVLPSKTAIAPVNPTFL 285
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 224
PRSEDEREMC+RT+YCTNIDKKVTQ D++LFFES CGEVQRLRLLGDY HSTRIAFVEF
Sbjct: 286 PRSEDEREMCARTVYCTNIDKKVTQADVRLFFESFCGEVQRLRLLGDYHHSTRIAFVEFT 345
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
+AESAI ALNCSGAVLGSLPIRVSPSKTPVRPR PR PLH
Sbjct: 346 VAESAILALNCSGAVLGSLPIRVSPSKTPVRPRIPRSPLH 385
>gi|255555781|ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
gi|223541913|gb|EEF43459.1| RNA-binding protein, putative [Ricinus communis]
Length = 379
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/219 (84%), Positives = 202/219 (92%)
Query: 46 LFNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV 105
L +A +++ Y+QGKRR+N RTS AQ++E+IRRTVYVSDIDQQVTEEQLA LF+ CGQV
Sbjct: 161 LNGSAARRKKNYNQGKRRLNSRTSMAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV 220
Query: 106 VDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 165
VDCRICGDPNSVLRFAF+EFT EEGARAAL+LAGT+LG+YPVRVLPSKTAIAPVNPTFLP
Sbjct: 221 VDCRICGDPNSVLRFAFIEFTHEEGARAALNLAGTVLGYYPVRVLPSKTAIAPVNPTFLP 280
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
RS+DEREMC RTIYCTNIDKKVTQ D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF M
Sbjct: 281 RSDDEREMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 340
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
AESAIAALNCSG VLGSLPIRVSPSKTPVRPRAPR P+H
Sbjct: 341 AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRIPMH 379
>gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685203|gb|EDQ71600.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/213 (86%), Positives = 201/213 (94%), Gaps = 1/213 (0%)
Query: 53 KRNGYSQGK-RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
K+NGY+QG RR+N RTS AQ+++ IRRTVYVSDIDQQVTEEQLA LF+TCGQVVDCR+C
Sbjct: 1 KKNGYNQGNNRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRVC 60
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 61 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPRSEDER 120
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA+A
Sbjct: 121 EMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESAMA 180
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
ALNCSGA+LGSLPIRVSPSKTPVRPR+PR PLH
Sbjct: 181 ALNCSGAILGSLPIRVSPSKTPVRPRSPRSPLH 213
>gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672887|gb|EDQ59418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/214 (85%), Positives = 202/214 (94%), Gaps = 1/214 (0%)
Query: 52 QKRNGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
+K+NG++Q KRR+N RTS AQ+++ IRRTVYVSDIDQQVTEEQLA LF+TCGQVVDCR+
Sbjct: 43 RKKNGFNQVNKRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRV 102
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAI PVNPTFLPRSEDE
Sbjct: 103 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPRSEDE 162
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
REMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA+
Sbjct: 163 REMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESAM 222
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
AALNCSGA+LGSLPIRVSPSKTPVRPR+PR PLH
Sbjct: 223 AALNCSGAILGSLPIRVSPSKTPVRPRSPRSPLH 256
>gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17 [Arabidopsis thaliana]
gi|332193408|gb|AEE31529.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 358
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/214 (84%), Positives = 200/214 (93%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
F+++ + QGKRRMN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF++CGQVVDCRI
Sbjct: 145 FRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRI 204
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDPNSVLRFAF+EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPVNPTFLPR+EDE
Sbjct: 205 CGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDE 264
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
REMC+RTIYCTNIDKKVTQ D+K+FFES CGEV RLRLLGDYQHSTRIAFVEF MAESAI
Sbjct: 265 REMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAI 324
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
AALNCSG VLGSLPIRVSPSKTPVRPR+PR P+H
Sbjct: 325 AALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPMH 358
>gi|356516140|ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max]
Length = 378
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 174/216 (80%), Positives = 198/216 (91%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
T +++NGY+QGKRR+N + +++E+ RRTVYVSDIDQ VTEEQLA LFL CGQVVDC
Sbjct: 163 TNRRRKNGYNQGKRRVNHKMDMEKREEMTRRTVYVSDIDQLVTEEQLAALFLNCGQVVDC 222
Query: 109 RICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 168
R+CGDPNS+LRFAF+EFTDEEGARAAL+L+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSE
Sbjct: 223 RVCGDPNSILRFAFIEFTDEEGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSE 282
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES 228
DEREMCSRTIYCTNIDKK+TQ D+K FFES+CGEVQRLRLLGDY HSTRIAFVEF +AES
Sbjct: 283 DEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAES 342
Query: 229 AIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
AIAAL+CSG +LGSLPIRVSPSKTPVR RAPRP +H
Sbjct: 343 AIAALSCSGVILGSLPIRVSPSKTPVRSRAPRPTMH 378
>gi|302788706|ref|XP_002976122.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
gi|300156398|gb|EFJ23027.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
Length = 267
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/242 (75%), Positives = 206/242 (85%), Gaps = 3/242 (1%)
Query: 19 LLLILSCFKLLVWLLVWYFLSLIKVLCLFNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIR 78
L ++L V +F + L LF ++NGY+ GK+R N R S AQ++E IR
Sbjct: 29 LEVLLETKAFFVLATFSFFAGSDRKLGLF---LVQQNGYNTGKKRYNNRQSKAQREECIR 85
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 138
RTVYVSDIDQQVTEEQLA LF+ CGQV+DCR+CGDPNSVLRFAFVEFTDEEGAR AL+LA
Sbjct: 86 RTVYVSDIDQQVTEEQLAALFINCGQVIDCRVCGDPNSVLRFAFVEFTDEEGARQALNLA 145
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
GTMLGFYPVRVLPSKTAI PVNPTFLPRSEDER+MC+RTIYCTNIDKKV+Q D+KLFFES
Sbjct: 146 GTMLGFYPVRVLPSKTAIVPVNPTFLPRSEDERQMCARTIYCTNIDKKVSQSDVKLFFES 205
Query: 199 VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA 258
+CGEV RLRLLGDY HSTRIAFVEFA+AESA+AALNCSGA+LGSLPIRVSPSKTPVRPR+
Sbjct: 206 LCGEVSRLRLLGDYHHSTRIAFVEFALAESAMAALNCSGAILGSLPIRVSPSKTPVRPRS 265
Query: 259 PR 260
PR
Sbjct: 266 PR 267
>gi|449438861|ref|XP_004137206.1| PREDICTED: uncharacterized protein LOC101204595 [Cucumis sativus]
Length = 403
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/217 (80%), Positives = 200/217 (92%)
Query: 48 NTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
N + +K+NG+SQG+RRMN + + ++DE+ RRTVYVSDIDQQVTEE LAT+F +CG+VVD
Sbjct: 187 NNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVD 246
Query: 108 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
CRICGDPNS+L FAF+EFTDEEGARA+L+L+GT+LGFYPVRVLPSKTAIAPVNP FLPRS
Sbjct: 247 CRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRS 306
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 227
+DEREMCSRTIYCTNIDKKVTQ ++KLFFES+CGEVQRLRLLGDY HSTRIAFVEF MAE
Sbjct: 307 DDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAE 366
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
SAIAALNCSG VLGSLPIRVSPSKTPVRPR+PR L+
Sbjct: 367 SAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
>gi|449483221|ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Cucumis
sativus]
Length = 316
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/217 (80%), Positives = 200/217 (92%)
Query: 48 NTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
N + +K+NG+SQG+RRMN + + ++DE+ RRTVYVSDIDQQVTEE LAT+F +CG+VVD
Sbjct: 100 NNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVD 159
Query: 108 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
CRICGDPNS+L FAF+EFTDEEGARA+L+L+GT+LGFYPVRVLPSKTAIAPVNP FLPRS
Sbjct: 160 CRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRS 219
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 227
+DEREMCSRTIYCTNIDKKVTQ ++KLFFES+CGEVQRLRLLGDY HSTRIAFVEF MAE
Sbjct: 220 DDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAE 279
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
SAIAALNCSG VLGSLPIRVSPSKTPVRPR+PR L+
Sbjct: 280 SAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 316
>gi|302769672|ref|XP_002968255.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
gi|300163899|gb|EFJ30509.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
Length = 260
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/207 (84%), Positives = 194/207 (93%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+K+NGY+ GK+R N R S AQ++E IRRTVYVSDIDQQVTEEQLA LF+ CGQV+DCR+C
Sbjct: 54 RKQNGYNTGKKRYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQVIDCRVC 113
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSVLRFAFVEFTDEEGAR AL+LAGTMLGFYPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 114 GDPNSVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFLPRSEDER 173
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
+MC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEFA+AESA+A
Sbjct: 174 QMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAESAMA 233
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRA 258
ALNCSGA+LGSLPIRVSPSKTPVRPR+
Sbjct: 234 ALNCSGAILGSLPIRVSPSKTPVRPRS 260
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 166 RSEDEREMC-SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 224
+S+ +RE C RT+Y ++ID++VT+ + F + CG+V R+ GD R AFVEF
Sbjct: 70 QSKAQREECIRRTVYVSDIDQQVTEEQLAALFIN-CGQVIDCRVCGDPNSVLRFAFVEFT 128
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
E A ALN +G +LG P+RV PSKT + P P
Sbjct: 129 DEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNP 163
>gi|357139501|ref|XP_003571320.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 328
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/205 (85%), Positives = 193/205 (94%)
Query: 60 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 119
GKRR+N RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ GQVVDCR+CGDPNSVLR
Sbjct: 124 GKRRVNSRTSQAQRDEVIRRTVYVSDIDHQVTEEQLAALFINVGQVVDCRMCGDPNSVLR 183
Query: 120 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
FAF+EFTDEEGARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIY
Sbjct: 184 FAFIEFTDEEGARAALTLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIY 243
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAV 239
CTNID+KV+Q D+KLFFES+CGEV RLRLLGDYQH+TRIAFVEF MAESA AALNCSG +
Sbjct: 244 CTNIDRKVSQADVKLFFESICGEVYRLRLLGDYQHNTRIAFVEFVMAESATAALNCSGVI 303
Query: 240 LGSLPIRVSPSKTPVRPRAPRPPLH 264
LGSLPIRVSPSKTPVRPRAPRP +H
Sbjct: 304 LGSLPIRVSPSKTPVRPRAPRPLMH 328
>gi|218200388|gb|EEC82815.1| hypothetical protein OsI_27601 [Oryza sativa Indica Group]
Length = 277
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/205 (85%), Positives = 191/205 (93%)
Query: 60 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 119
GKRRMN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVVDCR+CGDPNSVLR
Sbjct: 73 GKRRMNRRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLR 132
Query: 120 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
FAF+EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIY
Sbjct: 133 FAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIY 192
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAV 239
CTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +
Sbjct: 193 CTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVI 252
Query: 240 LGSLPIRVSPSKTPVRPRAPRPPLH 264
LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 253 LGSLPIRVSPSKTPVRPRAPRQLMH 277
>gi|224118386|ref|XP_002317806.1| predicted protein [Populus trichocarpa]
gi|222858479|gb|EEE96026.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/204 (85%), Positives = 192/204 (94%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
T +K+N Y+QG+RRMN RTS AQ+DE+I+RTVYVSDIDQQVTEEQLA LF+ CGQVVDC
Sbjct: 78 TNRRKKNSYNQGRRRMNNRTSMAQRDEIIKRTVYVSDIDQQVTEEQLAGLFIHCGQVVDC 137
Query: 109 RICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 168
RICGDPNSVLRFAFVEFTDEEGAR ALSL+GT+LGFYP+RVLPSKTAIAPVNPTFLPRSE
Sbjct: 138 RICGDPNSVLRFAFVEFTDEEGARTALSLSGTVLGFYPLRVLPSKTAIAPVNPTFLPRSE 197
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES 228
DEREMC+RT+YCTNIDKK+TQ D++LFFES CGEV RLRLLGDY HSTRIAFVEFA+AES
Sbjct: 198 DEREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAVAES 257
Query: 229 AIAALNCSGAVLGSLPIRVSPSKT 252
AIAALNCSGAVLGSLPIRVSPSKT
Sbjct: 258 AIAALNCSGAVLGSLPIRVSPSKT 281
>gi|255646437|gb|ACU23697.1| unknown [Glycine max]
Length = 291
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/216 (80%), Positives = 197/216 (91%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
T +++NGY+ GKRR+N + +++E+IRRTVYVSDIDQ VTEEQLA LFL CGQVVD
Sbjct: 76 TNRRRKNGYNHGKRRVNHKMDMEKREEMIRRTVYVSDIDQLVTEEQLAGLFLNCGQVVDY 135
Query: 109 RICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 168
R+CGDPNS+LRFAFVEFTDE+GARAAL+L+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSE
Sbjct: 136 RVCGDPNSILRFAFVEFTDEDGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSE 195
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES 228
DEREMCSRTIYCTNIDKK+TQ D+K FFES+CGEVQRLRLLGDY HSTRIAFVEF +AES
Sbjct: 196 DEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAES 255
Query: 229 AIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
AIAAL+CSG +LGSLPIRVSPSKTPVR RAPRP +H
Sbjct: 256 AIAALSCSGVILGSLPIRVSPSKTPVRSRAPRPSMH 291
>gi|147803358|emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]
Length = 195
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/194 (90%), Positives = 186/194 (95%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
AQ++EVI+RTVYVSDIDQQVTEE LA LF+ CGQVVDCRICGDPNSVLRFAFVEFTDEEG
Sbjct: 2 AQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSVLRFAFVEFTDEEG 61
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
ARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPRSEDEREMC+RTIYCTNIDKKVTQ
Sbjct: 62 ARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQA 121
Query: 191 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 250
++KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESAIAALNCSGA+LGSLPIRVSPS
Sbjct: 122 EVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGAILGSLPIRVSPS 181
Query: 251 KTPVRPRAPRPPLH 264
KTPVRPRAPRP LH
Sbjct: 182 KTPVRPRAPRPALH 195
>gi|50725622|dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
gi|182375457|dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group]
gi|215736921|dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639804|gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza sativa Japonica Group]
Length = 302
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/204 (85%), Positives = 190/204 (93%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRRMN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVVDCR+CGDPNSVLRF
Sbjct: 99 KRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRF 158
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 180
AF+EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYC
Sbjct: 159 AFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYC 218
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
TNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +L
Sbjct: 219 TNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVIL 278
Query: 241 GSLPIRVSPSKTPVRPRAPRPPLH 264
GSLPIRVSPSKTPVRPRAPR +H
Sbjct: 279 GSLPIRVSPSKTPVRPRAPRQLMH 302
>gi|115474513|ref|NP_001060853.1| Os08g0116400 [Oryza sativa Japonica Group]
gi|113622822|dbj|BAF22767.1| Os08g0116400, partial [Oryza sativa Japonica Group]
Length = 283
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/204 (85%), Positives = 190/204 (93%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRRMN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVVDCR+CGDPNSVLRF
Sbjct: 80 KRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRF 139
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 180
AF+EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYC
Sbjct: 140 AFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYC 199
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
TNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +L
Sbjct: 200 TNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVIL 259
Query: 241 GSLPIRVSPSKTPVRPRAPRPPLH 264
GSLPIRVSPSKTPVRPRAPR +H
Sbjct: 260 GSLPIRVSPSKTPVRPRAPRQLMH 283
>gi|357464159|ref|XP_003602361.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355491409|gb|AES72612.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 384
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/213 (80%), Positives = 195/213 (91%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+++NGY+ KRR+ + +++E+IRRTVYVSDIDQQVTEEQLA LFL CGQVVDCR+C
Sbjct: 172 RRKNGYNNAKRRVYHKMDMEKREEMIRRTVYVSDIDQQVTEEQLAALFLNCGQVVDCRVC 231
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNS+LRFAFVEFTDE GARAAL+L+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDER
Sbjct: 232 GDPNSILRFAFVEFTDEVGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDER 291
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMC+RTIYCTN+DKK+TQ D+K FFES+CGEVQRLRLLGDY HSTRIAFVEFA+AESAIA
Sbjct: 292 EMCTRTIYCTNLDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFAVAESAIA 351
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
AL+CSG VLGSLPIRVSPSKTPVR RA R P+H
Sbjct: 352 ALSCSGVVLGSLPIRVSPSKTPVRARAVRTPMH 384
>gi|326514404|dbj|BAJ96189.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 324
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/201 (86%), Positives = 189/201 (94%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRR+N RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ GQVVDCR+CGDPNSVLRF
Sbjct: 121 KRRVNSRTSQAQRDEVIRRTVYVSDIDHQVTEEQLAALFINVGQVVDCRMCGDPNSVLRF 180
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 180
AF+EFTDEEGARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYC
Sbjct: 181 AFIEFTDEEGARAALTLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYC 240
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
TNIDKKV+Q D+KLFFES+CGEV RLRLLGDYQH+TRIAFVEF MAESA AALNCSG +L
Sbjct: 241 TNIDKKVSQADVKLFFESICGEVYRLRLLGDYQHNTRIAFVEFVMAESATAALNCSGVIL 300
Query: 241 GSLPIRVSPSKTPVRPRAPRP 261
GSLPIRVSP KTPVRPRAPRP
Sbjct: 301 GSLPIRVSPFKTPVRPRAPRP 321
>gi|116781618|gb|ABK22180.1| unknown [Picea sitchensis]
Length = 288
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 195/217 (89%)
Query: 48 NTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
N + +K+N ++QGKRR+N R AQQ++ +RRTVYV DID QVTEEQLA LF+ CGQV+D
Sbjct: 72 NNSRRKKNNFNQGKRRLNGRNIRAQQEDSVRRTVYVCDIDHQVTEEQLAALFINCGQVID 131
Query: 108 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
CRICGDPNSVLRFAF+EF DE+GARAALSLAGTMLG+YPVRVLPSKTAI PVNPTFLPRS
Sbjct: 132 CRICGDPNSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVNPTFLPRS 191
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 227
EDEREMC+RTIYCTNIDKKV+Q ++++FFES+CGEV RLRLLGD+ HSTRIAFVEF MAE
Sbjct: 192 EDEREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAE 251
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
SAI ALNCSGA++GSLPIRVSPSKTPVRPR P P +H
Sbjct: 252 SAILALNCSGAIVGSLPIRVSPSKTPVRPRIPHPTMH 288
>gi|242080315|ref|XP_002444926.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
gi|241941276|gb|EES14421.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
Length = 348
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 174/204 (85%), Positives = 189/204 (92%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
+RR N RTS AQ+DEVIRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRF
Sbjct: 145 RRRTNSRTSMAQRDEVIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRF 204
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 180
AF+EFTDEEGARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYC
Sbjct: 205 AFIEFTDEEGARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYC 264
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
TNIDKKVTQ D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +L
Sbjct: 265 TNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVIL 324
Query: 241 GSLPIRVSPSKTPVRPRAPRPPLH 264
GSLPIRVSPSKTPVRPRAPR +H
Sbjct: 325 GSLPIRVSPSKTPVRPRAPRQLMH 348
>gi|224028543|gb|ACN33347.1| unknown [Zea mays]
gi|413941691|gb|AFW74340.1| CID11 [Zea mays]
Length = 328
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/205 (84%), Positives = 189/205 (92%)
Query: 60 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 119
+RR N RTS AQ+DE+IRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLR
Sbjct: 124 ARRRTNSRTSMAQRDEIIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLR 183
Query: 120 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
FAF+EFTDEEGARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIY
Sbjct: 184 FAFIEFTDEEGARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIY 243
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAV 239
CTNIDKKVTQ D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +
Sbjct: 244 CTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVI 303
Query: 240 LGSLPIRVSPSKTPVRPRAPRPPLH 264
LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 304 LGSLPIRVSPSKTPVRPRAPRQLMH 328
>gi|297809287|ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
gi|297318364|gb|EFH48786.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
Length = 336
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 178/219 (81%), Positives = 196/219 (89%), Gaps = 2/219 (0%)
Query: 48 NTAFQKRNGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
+ F+++ + Q GKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEEQLA LF+ GQVV
Sbjct: 118 DGGFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVV 177
Query: 107 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
DCRICGDPNSVLRFAF+EFTDE GARAALSL+GTMLGFYPV+V+PSKTAIAPVNPTFLPR
Sbjct: 178 DCRICGDPNSVLRFAFIEFTDEVGARAALSLSGTMLGFYPVKVMPSKTAIAPVNPTFLPR 237
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
+EDEREMC+RTIYCTNIDKK+TQ DIKLFFESVCGEV RLRLLGDY H TRI FVEF MA
Sbjct: 238 TEDEREMCARTIYCTNIDKKLTQADIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMA 297
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA-PRPPLH 264
ESAIAALNCSG +LGSLPIRVSPSKTPVR RA PR +H
Sbjct: 298 ESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAVPRHQMH 336
>gi|226529745|ref|NP_001150079.1| CID11 [Zea mays]
gi|195636508|gb|ACG37722.1| CID11 [Zea mays]
Length = 328
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 173/204 (84%), Positives = 189/204 (92%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
+RR N RTS AQ+DE+IRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRF
Sbjct: 125 RRRTNSRTSMAQRDEIIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRF 184
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 180
AF+EFTDEEGARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYC
Sbjct: 185 AFIEFTDEEGARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYC 244
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
TNIDKKVTQ D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +L
Sbjct: 245 TNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVIL 304
Query: 241 GSLPIRVSPSKTPVRPRAPRPPLH 264
GSLPIRVSPSKTPVRPRAPR +H
Sbjct: 305 GSLPIRVSPSKTPVRPRAPRQLMH 328
>gi|50725623|dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
Length = 201
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 172/201 (85%), Positives = 187/201 (93%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 123
MN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVVDCR+CGDPNSVLRFAF+
Sbjct: 1 MNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFI 60
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 183
EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNI
Sbjct: 61 EFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNI 120
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 243
DKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +LGSL
Sbjct: 121 DKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSL 180
Query: 244 PIRVSPSKTPVRPRAPRPPLH 264
PIRVSPSKTPVRPRAPR +H
Sbjct: 181 PIRVSPSKTPVRPRAPRQLMH 201
>gi|14030687|gb|AAK53018.1|AF375434_1 At1g32790 [Arabidopsis thaliana]
gi|25090128|gb|AAN72236.1| At1g32790/F6N18_9 [Arabidopsis thaliana]
Length = 201
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/201 (85%), Positives = 188/201 (93%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 123
MN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF++CGQVVDCRICGDPNSVLRFAF+
Sbjct: 1 MNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFI 60
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 183
EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPVNPTFLPR+EDE EMC+RTIYCTNI
Sbjct: 61 EFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDESEMCARTIYCTNI 120
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 243
DKKVTQ D+K+FFE CGEV RLRLLGDYQHSTRIAFVEF MAESAIAALNCSG VLGSL
Sbjct: 121 DKKVTQSDVKIFFEYFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSL 180
Query: 244 PIRVSPSKTPVRPRAPRPPLH 264
PIRVSPSKTPVRPR+PR P+H
Sbjct: 181 PIRVSPSKTPVRPRSPRHPMH 201
>gi|15235177|ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|4115925|gb|AAD03436.1| contains similarity to RNA recognition motifs (Pfam: PF00076,
Score=5.5e-23, N=2) [Arabidopsis thaliana]
gi|4539439|emb|CAB40027.1| RNA-binding protein [Arabidopsis thaliana]
gi|4959384|gb|AAD34325.1| RNA-binding protein [Arabidopsis thaliana]
gi|7267758|emb|CAB78184.1| RNA-binding protein [Arabidopsis thaliana]
gi|14517528|gb|AAK62654.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|18700204|gb|AAL77712.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|21592407|gb|AAM64358.1| RNA-binding protein [Arabidopsis thaliana]
gi|332657507|gb|AEE82907.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 336
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/219 (80%), Positives = 196/219 (89%), Gaps = 2/219 (0%)
Query: 48 NTAFQKRNGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
+ +F+++ + Q GKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEEQLA LF+ GQVV
Sbjct: 118 DGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVV 177
Query: 107 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
DCRICGDPNSVLRFAF+EFTDE GAR AL+L+GTMLGFYPV+V+PSKTAIAPVNPTFLPR
Sbjct: 178 DCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPR 237
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
+EDEREMC+RTIYCTNIDKK+TQ DIKLFFESVCGEV RLRLLGDY H TRI FVEF MA
Sbjct: 238 TEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMA 297
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA-PRPPLH 264
ESAIAALNCSG +LGSLPIRVSPSKTPVR RA PR +H
Sbjct: 298 ESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336
>gi|356509167|ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787572 [Glycine max]
Length = 369
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 167/201 (83%), Positives = 187/201 (93%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+++NGY+ GKRRMN + +++E+IRRTVYVSDIDQ VTEEQLA LFL CGQVVDCR+C
Sbjct: 157 RRKNGYNPGKRRMNNKMDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVC 216
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNS+LRFAFVEFTDEEGARAALSL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDER
Sbjct: 217 GDPNSILRFAFVEFTDEEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDER 276
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMCSRTIYCTNIDKK+TQ D+K FFES+CGEV RLRLLGDY HSTRIAFVEFA+AESAIA
Sbjct: 277 EMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIA 336
Query: 232 ALNCSGAVLGSLPIRVSPSKT 252
AL+CSG +LGSLPIRVSPSKT
Sbjct: 337 ALSCSGVILGSLPIRVSPSKT 357
>gi|388492572|gb|AFK34352.1| unknown [Medicago truncatula]
Length = 376
Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 169/216 (78%), Positives = 194/216 (89%), Gaps = 2/216 (0%)
Query: 49 TAFQKRNGYS-QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
T +++NGY+ GKRR N + +++E+IRRTVY SDIDQ VTEEQLA+LFL CGQVVD
Sbjct: 161 TNRRRKNGYTTNGKRRANHKVDMEKREEMIRRTVYASDIDQLVTEEQLASLFLNCGQVVD 220
Query: 108 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
CR+C DPNS+LRFAF+EFTDEE ARAA+SL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRS
Sbjct: 221 CRVCRDPNSILRFAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRS 280
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 227
EDEREMCSRTIYCTNIDKK+TQ D+K FFES+CGEV RLRLLGDYQHSTRIAFVEFA+AE
Sbjct: 281 EDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVAE 340
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKTPVRPR-APRPP 262
SAIAAL+CSG +LG+LPIRVSPSKTPVR R +PR P
Sbjct: 341 SAIAALSCSGVILGALPIRVSPSKTPVRARSSPRSP 376
>gi|356516142|ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
Length = 369
Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 165/201 (82%), Positives = 187/201 (93%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+++NGY+ GKRRMN + +++E+IRRTVYVSDIDQ VTEEQLA LFL CGQVVDCR+C
Sbjct: 157 RRKNGYNPGKRRMNHKMDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVC 216
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNS+LRFAF+EFTD+EGARAALSL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDER
Sbjct: 217 GDPNSILRFAFIEFTDDEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDER 276
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMCSRTIYCTNIDKK+TQ D+K FFES+CGEV RLRLLGDY HSTRIAFVEFA+AESAIA
Sbjct: 277 EMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIA 336
Query: 232 ALNCSGAVLGSLPIRVSPSKT 252
AL+CSG +LGSLPIRVSPSKT
Sbjct: 337 ALSCSGVILGSLPIRVSPSKT 357
>gi|1174153|gb|AAA86641.1| RNA-binding protein [Arabidopsis thaliana]
Length = 336
Score = 359 bits (921), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 174/219 (79%), Positives = 194/219 (88%), Gaps = 2/219 (0%)
Query: 48 NTAFQKRNGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
+ +F+++ + Q GKRRMN RTS AQ++E+IRRTVYVSDI QQVTEEQLA LF+ GQVV
Sbjct: 118 DGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIYQQVTEEQLAGLFIGFGQVV 177
Query: 107 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
DCRICGDPNSVLRFAF+EFTDE GAR AL+L+GTMLGFYPV+V+PSKTAIAPVNPTFLPR
Sbjct: 178 DCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPR 237
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
+EDEREMC+RTIYCTNIDKK+TQ DIKLFFESVCGEV RLRLLGDY H TRI FVEF MA
Sbjct: 238 TEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMA 297
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA-PRPPLH 264
ESAI ALNCSG +LGSLPIRVSPSKTPVR RA PR +H
Sbjct: 298 ESAIGALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336
>gi|224056565|ref|XP_002298913.1| predicted protein [Populus trichocarpa]
gi|222846171|gb|EEE83718.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 166/213 (77%), Positives = 188/213 (88%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+KRN ++QG+R++N R AQQ++ IRRTVYVSDIDQ VTEE+LA LF CGQVVDCR+C
Sbjct: 95 RKRNNFNQGRRKLNGRAYRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVVDCRVC 154
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP+SVLRFAFVEF DE+GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 155 GDPHSVLRFAFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDER 214
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMC+RT+YCTNIDKKV+Q ++K FFES+CGEV RLRLLGD HSTRIAFVEFAMAESAI
Sbjct: 215 EMCTRTVYCTNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMAESAIV 274
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
ALNCSG LGS P+RVSPSKTPVRPR RP +H
Sbjct: 275 ALNCSGMALGSQPVRVSPSKTPVRPRVTRPAMH 307
>gi|79319100|ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|332193409|gb|AEE31530.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 406
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 166/198 (83%), Positives = 184/198 (92%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
F+++ + QGKRRMN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF++CGQVVDCRI
Sbjct: 145 FRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRI 204
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDPNSVLRFAF+EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPVNPTFLPR+EDE
Sbjct: 205 CGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDE 264
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
REMC+RTIYCTNIDKKVTQ D+K+FFES CGEV RLRLLGDYQHSTRIAFVEF MAESAI
Sbjct: 265 REMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAI 324
Query: 231 AALNCSGAVLGSLPIRVS 248
AALNCSG VLGSLPIR S
Sbjct: 325 AALNCSGVVLGSLPIRSS 342
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y +++D++VT+ + F S CG+V R+ GD R AF+EF E A+ ALN
Sbjct: 173 RTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNL 231
Query: 236 SGAVLGSLPIRVSPSKTPVRPRAP 259
SG +LG P++V PSKT + P P
Sbjct: 232 SGTMLGFYPVKVLPSKTAIAPVNP 255
>gi|357464151|ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355491405|gb|AES72608.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 384
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 171/224 (76%), Positives = 196/224 (87%), Gaps = 10/224 (4%)
Query: 49 TAFQKRNGYS-QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
T +++NGY+ GKRR N + +++E+IRRTVYVSDIDQ VTEEQLA+LFL CGQVVD
Sbjct: 161 TNRRRKNGYTTNGKRRANHKVDMEKREEMIRRTVYVSDIDQLVTEEQLASLFLNCGQVVD 220
Query: 108 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
CR+CGDPNS+LRFAF+EFTDEE ARAA+SL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRS
Sbjct: 221 CRVCGDPNSILRFAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRS 280
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM-- 225
EDEREMCSRTIYCTNIDKK+TQ D+K FFES+CGEV RLRLLGDYQHSTRIAFVEFA+
Sbjct: 281 EDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVIF 340
Query: 226 ------AESAIAALNCSGAVLGSLPIRVSPSKTPVRPR-APRPP 262
AESAIAAL+CSG +LG+LPIRVSPSKTPVR R +PR P
Sbjct: 341 FASFFQAESAIAALSCSGVILGALPIRVSPSKTPVRARSSPRSP 384
>gi|297851722|ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
gi|297339584|gb|EFH70001.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
Length = 409
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 166/200 (83%), Positives = 184/200 (92%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
F+++ + QGKRRMN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF++CGQVVDCRI
Sbjct: 152 FRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRI 211
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDPNSVLRFAF+EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPVNPTFLPR+EDE
Sbjct: 212 CGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDE 271
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
REMC+RTIYCTNIDKKVTQ D+K+FFES CGEV RLRLLGDYQHSTRIAFVEF MAESAI
Sbjct: 272 REMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAI 331
Query: 231 AALNCSGAVLGSLPIRVSPS 250
AALNCSG VLGSLPIR S
Sbjct: 332 AALNCSGVVLGSLPIRSGES 351
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y +++D++VT+ + F S CG+V R+ GD R AF+EF E A+ ALN
Sbjct: 180 RTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNL 238
Query: 236 SGAVLGSLPIRVSPSKTPVRPRAP 259
SG +LG P++V PSKT + P P
Sbjct: 239 SGTMLGFYPVKVLPSKTAIAPVNP 262
>gi|308081540|ref|NP_001182915.1| uncharacterized protein LOC100501201 [Zea mays]
gi|238008164|gb|ACR35117.1| unknown [Zea mays]
gi|413921443|gb|AFW61375.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 342
Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 168/196 (85%), Positives = 181/196 (92%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 124
N RTS AQ+DE IRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+E
Sbjct: 142 NSRTSMAQRDEAIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIE 201
Query: 125 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
FTDEEGARAAL+L+GT+LG+YPV+VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNID
Sbjct: 202 FTDEEGARAALNLSGTVLGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNID 261
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLP 244
KKVTQ D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG VLGSLP
Sbjct: 262 KKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVVLGSLP 321
Query: 245 IRVSPSKTPVRPRAPR 260
IRVSPSKTPVRPR PR
Sbjct: 322 IRVSPSKTPVRPRVPR 337
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E
Sbjct: 246 DEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAES 305
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 164
A AAL+ +G +LG P+RV PSKT + P P L
Sbjct: 306 ATAALNCSGVVLGSLPIRVSPSKTPVRPRVPRHL 339
>gi|15229132|ref|NP_190508.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|79314662|ref|NP_001030833.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|12324442|gb|AAG52182.1|AC012329_9 putative RNA-binding protein; 38450-35693 [Arabidopsis thaliana]
gi|6723409|emb|CAB66418.1| RNA-binding-like protein [Arabidopsis thaliana]
gi|222424104|dbj|BAH20012.1| AT3G49390 [Arabidopsis thaliana]
gi|332645014|gb|AEE78535.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|332645015|gb|AEE78536.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
Length = 353
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/209 (80%), Positives = 190/209 (90%), Gaps = 1/209 (0%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++R + QGKRRMN RTS AQ+D+VIRRTVYVSDIDQQVTEE LA +F+ CGQVVDCR+C
Sbjct: 142 RRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVC 201
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSVLRFAF+EFT+EEGARAALS++GT+LGFYP++VLPSKTAIAPVNPTFLPRSEDER
Sbjct: 202 GDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDER 261
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMC RT+YCTNIDK++TQ D+K FFE +CGEV RLR LGDY H TRIAFVEFAMAESAIA
Sbjct: 262 EMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIA 320
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
AL+CSG VLG+LPIRVSPSKTPVRP PR
Sbjct: 321 ALHCSGIVLGALPIRVSPSKTPVRPHFPR 349
>gi|297819578|ref|XP_002877672.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
gi|297323510|gb|EFH53931.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/208 (80%), Positives = 190/208 (91%), Gaps = 1/208 (0%)
Query: 53 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 112
+R + QGKRR+N RTS AQ+D+VIRRTVYVSDIDQQVTEE LA +F+ CGQVVDCR+CG
Sbjct: 141 RRRSFGQGKRRINKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCG 200
Query: 113 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE 172
DPNSVLRFAF+EFT+EEGARAALS++GT+LGFYP++VLPSKTAIAPVNPTFLPRSEDERE
Sbjct: 201 DPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDERE 260
Query: 173 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 232
MC RT+YCTNIDK++TQ D+K+FFE +CGEV RLR LGDY H TRIAFVEFAMAESAIAA
Sbjct: 261 MCVRTVYCTNIDKRITQIDLKVFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAA 319
Query: 233 LNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
L+CSG VLG+LPIRVSPSKTPVRP PR
Sbjct: 320 LHCSGIVLGALPIRVSPSKTPVRPHFPR 347
>gi|110737686|dbj|BAF00782.1| RNA-binding - like protein [Arabidopsis thaliana]
Length = 353
Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 168/209 (80%), Positives = 189/209 (90%), Gaps = 1/209 (0%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++R + QGKRRMN RTS AQ+D+VIRRTVYVSDIDQQVTEE LA +F+ CGQVVDCR+C
Sbjct: 142 RRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVC 201
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSVLRFAF+EFT+EEGARAALS++GT+LGFYP++VLPSKTAIAPVNPTFLPRSEDER
Sbjct: 202 GDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDER 261
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMC RT+YCTNIDK++TQ D+K FFE CGEV RLR LGDY H TRIAFVEFAMAESAIA
Sbjct: 262 EMCVRTVYCTNIDKRITQIDLKGFFEMPCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIA 320
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
AL+CSG VLG+LPIRVSPSKTPVRP PR
Sbjct: 321 ALHCSGIVLGALPIRVSPSKTPVRPHFPR 349
>gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
gi|11994215|dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana]
gi|332642006|gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
Length = 327
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/211 (78%), Positives = 184/211 (87%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+KR YSQG+RR+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF CGQVVDCRIC
Sbjct: 114 RKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRIC 173
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP+SVLRFAFVEF D++GA ALSL GTMLGFYPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 174 GDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPRSEDER 233
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMC+RTIYCTNIDKKV+Q D++ FFES CGEV RLRLLGD HSTRIAFVEFA+A+SA++
Sbjct: 234 EMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSALS 293
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 262
ALNCSG V+GS PIRVSPSKTPVRPR RPP
Sbjct: 294 ALNCSGMVVGSQPIRVSPSKTPVRPRITRPP 324
>gi|224114547|ref|XP_002316790.1| predicted protein [Populus trichocarpa]
gi|222859855|gb|EEE97402.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 165/213 (77%), Positives = 187/213 (87%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++RN ++QG+RR+N R AQ+++ IRRTVYVSDIDQ VTEEQLA LF CGQVVDCRIC
Sbjct: 96 RRRNDFNQGRRRLNGRAYRAQREDSIRRTVYVSDIDQHVTEEQLAGLFSGCGQVVDCRIC 155
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP SVLRFAFVEF E+GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLP+SEDER
Sbjct: 156 GDPRSVLRFAFVEFAVEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPQSEDER 215
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMC+RT+YCTNI+KKV+Q ++K FFES+CGEV RLRLLGD+ HSTRIAFVEFAMAESAI
Sbjct: 216 EMCTRTVYCTNIEKKVSQAEVKNFFESICGEVTRLRLLGDHVHSTRIAFVEFAMAESAIV 275
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
ALNCSG VLGS P+RVSPSKTPVRPR R LH
Sbjct: 276 ALNCSGMVLGSQPVRVSPSKTPVRPRVTRLALH 308
>gi|224061485|ref|XP_002300503.1| predicted protein [Populus trichocarpa]
gi|222847761|gb|EEE85308.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/197 (83%), Positives = 182/197 (92%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 123
++ RTS AQ+++ +RRTVYVSDIDQQVTEEQLA LF+ CGQVVDCRICGDPNSVL FAF+
Sbjct: 1 ISSRTSMAQREDTVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPNSVLHFAFI 60
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 183
EFTDEEGARAALSL+GTMLG+YPV+VLPSKTAIAPVN TFLPR++DEREMC+RTIYCTNI
Sbjct: 61 EFTDEEGARAALSLSGTMLGYYPVKVLPSKTAIAPVNHTFLPRNDDEREMCARTIYCTNI 120
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 243
D+ TQ DIKLFFES+CGEV RLRLLGD+ H TRIAFVEF MAESAIAALNCSGAV+GSL
Sbjct: 121 DRNFTQSDIKLFFESLCGEVYRLRLLGDHHHPTRIAFVEFVMAESAIAALNCSGAVIGSL 180
Query: 244 PIRVSPSKTPVRPRAPR 260
PIRVSPSKTPVRPR PR
Sbjct: 181 PIRVSPSKTPVRPRGPR 197
>gi|358248658|ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
gi|255639113|gb|ACU19856.1| unknown [Glycine max]
Length = 296
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/218 (74%), Positives = 190/218 (87%)
Query: 47 FNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
F + ++RN ++QG+RR++ R+ AQ+++ IRRTVYVS+IDQ VTEE+LA LF +CGQV+
Sbjct: 79 FLNSRRRRNSFNQGRRRVSGRSLKAQREDSIRRTVYVSEIDQHVTEERLAALFSSCGQVI 138
Query: 107 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
DCRICGDP+SVLRFAFVEF DE GAR AL+L GT+LG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 139 DCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPVNPTFLPR 198
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
S+DEREMC+RTIYCTNIDKKV+Q ++K FFES CGEV RLRLLGD HSTRIAFVEFAMA
Sbjct: 199 SDDEREMCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQVHSTRIAFVEFAMA 258
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
ESAI ALNCSG +LG+ PIRVSPSKTPVRPR PRP H
Sbjct: 259 ESAIIALNCSGMLLGTQPIRVSPSKTPVRPRVPRPASH 296
>gi|224115532|ref|XP_002317057.1| predicted protein [Populus trichocarpa]
gi|222860122|gb|EEE97669.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/190 (84%), Positives = 178/190 (93%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
AQQ+E++RRTVYVSDIDQQVTEEQLA LF+ CGQVVDCRICGDP SVLRFAF+EFTDEEG
Sbjct: 2 AQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEEG 61
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
A+AALSL+GTMLG+YPV+VLPSKTAIAPVNPTFLPR++DEREMC+RTIYCTNID+ +TQ
Sbjct: 62 AQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQA 121
Query: 191 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 250
+IKLFFES+CGEV LRLLGD+ H TRIAFVEF MAESAIAALNCSG VLGSLPIRVSPS
Sbjct: 122 NIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPS 181
Query: 251 KTPVRPRAPR 260
KTPVRPR PR
Sbjct: 182 KTPVRPRGPR 191
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 128
N + E+ RT+Y ++ID+ +T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 98 NDDEREMCARTIYCTNIDRNLTQANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMA 157
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 161
E A AAL+ +G +LG P+RV PSKT + P P
Sbjct: 158 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRGP 190
>gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|332194856|gb|AEE32977.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 308
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
Query: 52 QKRNGYSQGKR-RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
++RN Y+QG+R R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQVVDCRI
Sbjct: 94 KRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 153
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLPRSEDE
Sbjct: 154 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 213
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
REMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAMAESA+
Sbjct: 214 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 273
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 262
AALNCSG VLGS PIRVSPSKTPVR R R P
Sbjct: 274 AALNCSGIVLGSQPIRVSPSKTPVRSRITRSP 305
>gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51970080|dbj|BAD43732.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 295
Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 184/212 (86%), Gaps = 1/212 (0%)
Query: 52 QKRNGYSQGKR-RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
++RN Y+QG+R R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQVVDCRI
Sbjct: 81 KRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 140
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLPRSEDE
Sbjct: 141 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 200
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
REMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAMAESA+
Sbjct: 201 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 260
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 262
AALNCSG VLGS PIRVSPSKTPVR R R P
Sbjct: 261 AALNCSGIVLGSQPIRVSPSKTPVRSRITRSP 292
>gi|79325059|ref|NP_001031614.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|332657508|gb|AEE82908.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 326
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/200 (81%), Positives = 181/200 (90%), Gaps = 1/200 (0%)
Query: 48 NTAFQKRNGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
+ +F+++ + Q GKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEEQLA LF+ GQVV
Sbjct: 118 DGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVV 177
Query: 107 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
DCRICGDPNSVLRFAF+EFTDE GAR AL+L+GTMLGFYPV+V+PSKTAIAPVNPTFLPR
Sbjct: 178 DCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPR 237
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
+EDEREMC+RTIYCTNIDKK+TQ DIKLFFESVCGEV RLRLLGDY H TRI FVEF MA
Sbjct: 238 TEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMA 297
Query: 227 ESAIAALNCSGAVLGSLPIR 246
ESAIAALNCSG +LGSLPIR
Sbjct: 298 ESAIAALNCSGVLLGSLPIR 317
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E+ RT+Y ++ID++VT+ + F G+V R+ GD R AF+EF A
Sbjct: 146 EIIRRTVYVSDIDQQVTEEQLAGLFIGF-GQVVDCRICGDPNSVLRFAFIEFTDEVGART 204
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
ALN SG +LG P++V PSKT + P P
Sbjct: 205 ALNLSGTMLGFYPVKVMPSKTAIAPVNP 232
>gi|356556922|ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 296
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 157/209 (75%), Positives = 184/209 (88%)
Query: 56 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN 115
++QG+R+++ R+ AQ+++ IRRTVYVS+IDQ VTEE+LA LF +CGQV+DCRICGDP+
Sbjct: 88 SFNQGRRKVSGRSLKAQREDSIRRTVYVSEIDQHVTEERLAALFSSCGQVIDCRICGDPH 147
Query: 116 SVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 175
SVLRFAFVEF DE GAR AL+L GT+LG+YPVRVLPSKTAI PVNPTFLPRS+DEREMC+
Sbjct: 148 SVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPVNPTFLPRSDDEREMCA 207
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+YCTNIDKKV+Q ++K FFES CGEV RLRLLGD+ HSTRIAFVEFAMAESAI ALNC
Sbjct: 208 RTVYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDHVHSTRIAFVEFAMAESAIIALNC 267
Query: 236 SGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
SG +LG+ PIRVSPSKTPVRPR RP H
Sbjct: 268 SGMLLGTQPIRVSPSKTPVRPRVTRPASH 296
>gi|225462109|ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
[Vitis vinifera]
gi|296088694|emb|CBI38144.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 159/201 (79%), Positives = 177/201 (88%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 123
++ R AQ+++ IRRTVYVSDIDQ VTEE+LA LF +CGQVVDCR+CGDP+SVLRFAFV
Sbjct: 92 LSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCGDPHSVLRFAFV 151
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 183
EF DE GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLPRSEDEREMC+RT+YCTNI
Sbjct: 152 EFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNI 211
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 243
DKKV+Q ++K FFE CGEV RLRLLGD+ HSTRIAFVEFAMAESAI ALNCSG VLG+
Sbjct: 212 DKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGLVLGTQ 271
Query: 244 PIRVSPSKTPVRPRAPRPPLH 264
PIRVSPSKTPVRPR PR LH
Sbjct: 272 PIRVSPSKTPVRPRVPRATLH 292
>gi|388522717|gb|AFK49420.1| unknown [Medicago truncatula]
Length = 188
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/188 (85%), Positives = 177/188 (94%), Gaps = 1/188 (0%)
Query: 76 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
+IRRTVYVSDIDQ VTEEQLA+LFL CGQVVDCR+CGDPNS+LRFAF+EFTDEE ARAA+
Sbjct: 1 MIRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESARAAV 60
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
SL+GTMLG+YP+RVLPSKTAIAPVNPT LPRSEDEREMCSRTIYCTNIDKK+TQ D+K F
Sbjct: 61 SLSGTMLGYYPLRVLPSKTAIAPVNPTSLPRSEDEREMCSRTIYCTNIDKKLTQADVKHF 120
Query: 196 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
FES+CGEV RLRLLGDYQHSTRIAFVEFA+AESAIAAL+CSG +LG+LPIRVSPSKTPVR
Sbjct: 121 FESICGEVHRLRLLGDYQHSTRIAFVEFAVAESAIAALSCSGVILGALPIRVSPSKTPVR 180
Query: 256 PR-APRPP 262
R +PR P
Sbjct: 181 ARSSPRSP 188
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 128
+ + E+ RT+Y ++ID+++T+ + F + CG+V R+ GD R AFVEF
Sbjct: 92 SEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVA 151
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
E A AALS +G +LG P+RV PSKT PV PRS
Sbjct: 152 ESAIAALSCSGVILGALPIRVSPSKT---PVRARSSPRS 187
>gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|12324022|gb|AAG51971.1|AC024260_9 RNA-binding protein, putative; 40942-42923 [Arabidopsis thaliana]
gi|48427656|gb|AAT42377.1| At1g53650 [Arabidopsis thaliana]
gi|332194855|gb|AEE32976.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 314
Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 158/200 (79%), Positives = 174/200 (87%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 122
R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQVVDCRICGDPNSVLRFAF
Sbjct: 112 RLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAF 171
Query: 123 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
VEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLPRSEDEREMCSRTIYCTN
Sbjct: 172 VEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTN 231
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGS 242
+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAMAESA+AALNCSG VLGS
Sbjct: 232 VDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGS 291
Query: 243 LPIRVSPSKTPVRPRAPRPP 262
PIRVSPSKTPVR R R P
Sbjct: 292 QPIRVSPSKTPVRSRITRSP 311
>gi|218187722|gb|EEC70149.1| hypothetical protein OsI_00850 [Oryza sativa Indica Group]
Length = 317
Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 159/209 (76%), Positives = 179/209 (85%), Gaps = 1/209 (0%)
Query: 53 KRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+RNGY SQG+RRMN R +A +++ IRRTVYVSDID VTEE+LA +F CGQVVDCRIC
Sbjct: 105 RRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERLADIFANCGQVVDCRIC 164
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP+SVLRFAF+EF DEEGARAAL+L GTMLGFYPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 165 GDPHSVLRFAFIEFADEEGARAALNLGGTMLGFYPVRVLPSKTAILPVNPKFLPRTEDEK 224
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF AE AI
Sbjct: 225 EMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAECAIM 284
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 285 ALNCSGMILGTLPVRVSPSKTPVKPRLNR 313
>gi|255578158|ref|XP_002529948.1| RNA-binding protein, putative [Ricinus communis]
gi|223530546|gb|EEF32425.1| RNA-binding protein, putative [Ricinus communis]
Length = 281
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/200 (77%), Positives = 176/200 (88%)
Query: 47 FNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
F++ +KRN Y+QGKRR+N R AQ+D+ IRRTVYVSDIDQ VTEE+LA LF +CGQVV
Sbjct: 81 FSSNRRKRNNYNQGKRRLNGRAYRAQRDDSIRRTVYVSDIDQHVTEERLAGLFSSCGQVV 140
Query: 107 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
DCR+CGDP+SVLRFAFVEF DE GARAAL+L GT+LG+YP RVLPSKTAI PVNPTFLPR
Sbjct: 141 DCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTVLGYYPFRVLPSKTAILPVNPTFLPR 200
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
SEDEREMCSRT+YCTNIDKK++Q ++K FFES CGEV RLRLLGD+ HSTRIAFVEFAMA
Sbjct: 201 SEDEREMCSRTVYCTNIDKKISQAEVKTFFESTCGEVTRLRLLGDHVHSTRIAFVEFAMA 260
Query: 227 ESAIAALNCSGAVLGSLPIR 246
ESAI ALNCSG V+G+ PIR
Sbjct: 261 ESAIIALNCSGMVVGTQPIR 280
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y ++ID+ VT+ + F S CG+V R+ GD R AFVEFA A AALN
Sbjct: 113 RTVYVSDIDQHVTEERLAGLFSS-CGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNL 171
Query: 236 SGAVLGSLPIRVSPSKTPVRPRAP 259
G VLG P RV PSKT + P P
Sbjct: 172 GGTVLGYYPFRVLPSKTAILPVNP 195
>gi|222617961|gb|EEE54093.1| hypothetical protein OsJ_00835 [Oryza sativa Japonica Group]
Length = 317
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 158/209 (75%), Positives = 178/209 (85%), Gaps = 1/209 (0%)
Query: 53 KRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+RNGY SQG+RRMN R +A +++ IRRTVYVSDID VTEE+LA +F CGQVVDCRIC
Sbjct: 105 RRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERLADIFANCGQVVDCRIC 164
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP+SVLRFAF+EF DEEGAR AL+L GTMLGFYPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 165 GDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLPSKTAILPVNPKFLPRTEDEK 224
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF AE AI
Sbjct: 225 EMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAECAIM 284
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 285 ALNCSGMILGTLPVRVSPSKTPVKPRLNR 313
>gi|115435208|ref|NP_001042362.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|56201519|dbj|BAD73038.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|56201749|dbj|BAD73106.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|113531893|dbj|BAF04276.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|215737283|dbj|BAG96212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 308
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 158/210 (75%), Positives = 179/210 (85%), Gaps = 1/210 (0%)
Query: 52 QKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
++RNGY SQG+RRMN R +A +++ IRRTVYVSDID VTEE+LA +F CGQVVDCRI
Sbjct: 95 RRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERLADIFANCGQVVDCRI 154
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDP+SVLRFAF+EF DEEGAR AL+L GTMLGFYPVRVLPSKTAI PVNP FLPR+EDE
Sbjct: 155 CGDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLPSKTAILPVNPKFLPRTEDE 214
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF AE AI
Sbjct: 215 KEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAECAI 274
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 275 MALNCSGMILGTLPVRVSPSKTPVKPRLNR 304
>gi|388509636|gb|AFK42884.1| unknown [Lotus japonicus]
Length = 313
Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/203 (76%), Positives = 178/203 (87%)
Query: 59 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 118
QG RR R AQ+++ +RRTVYVSDIDQ VTEE+LA LF TCG V+DCRICGDP+SVL
Sbjct: 107 QGGRRFTGRVLKAQREDSVRRTVYVSDIDQHVTEERLAALFTTCGSVIDCRICGDPHSVL 166
Query: 119 RFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI 178
RFAFVEF DE GARAAL+L+GT+LG+YPVRVLPSKTAI PVNPTFLPRS+DEREMCSRT+
Sbjct: 167 RFAFVEFADEYGARAALNLSGTVLGYYPVRVLPSKTAILPVNPTFLPRSDDEREMCSRTV 226
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGA 238
YCTNIDKKV+Q ++K FFE CGEV R+RLLGD+ HSTRIAFVEFA+AESAI AL+CSG
Sbjct: 227 YCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIAFVEFAIAESAIIALSCSGM 286
Query: 239 VLGSLPIRVSPSKTPVRPRAPRP 261
+LG+ P+RVSPSKTPVRPR PRP
Sbjct: 287 LLGTQPVRVSPSKTPVRPRVPRP 309
>gi|147804944|emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]
Length = 369
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/174 (86%), Positives = 165/174 (94%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+K+N + QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEE+LA LF+TCGQVVDCR+C
Sbjct: 186 RKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVC 245
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDER
Sbjct: 246 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDER 305
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
EMC+RTIYCTNIDKKV+Q D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF M
Sbjct: 306 EMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIM 359
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E+ RT+Y ++ID++VT+ + F CG+V R+ GD R AFVEF E A A
Sbjct: 209 EIIRRTVYVSDIDQQVTEEKLAALF-ITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARA 267
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
AL+ +G +LG P+RV PSKT + P P
Sbjct: 268 ALSLAGTMLGYYPVRVLPSKTAIAPVNP 295
>gi|413921444|gb|AFW61376.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 482
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/181 (85%), Positives = 167/181 (92%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 124
N RTS AQ+DE IRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+E
Sbjct: 142 NSRTSMAQRDEAIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIE 201
Query: 125 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
FTDEEGARAAL+L+GT+LG+YPV+VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNID
Sbjct: 202 FTDEEGARAALNLSGTVLGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNID 261
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLP 244
KKVTQ D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG VLGSLP
Sbjct: 262 KKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVVLGSLP 321
Query: 245 I 245
I
Sbjct: 322 I 322
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF E A A
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 210
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRP 256
ALN SG VLG P++V PSKT + P
Sbjct: 211 ALNLSGTVLGYYPVKVLPSKTAIAP 235
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E
Sbjct: 246 DEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAES 305
Query: 131 ARAALSLAGTMLGFYPVRVL 150
A AAL+ +G +LG P+ ++
Sbjct: 306 ATAALNCSGVVLGSLPISLM 325
>gi|413941689|gb|AFW74338.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 182
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/176 (85%), Positives = 165/176 (93%)
Query: 89 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 148
+VTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVR
Sbjct: 7 RVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 66
Query: 149 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 208
VLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGEV RLRL
Sbjct: 67 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRL 126
Query: 209 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
LGDY HSTRIAFVEF MAESA AALNCSG +LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 127 LGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 182
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E
Sbjct: 87 DEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAES 146
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 161
A AAL+ +G +LG P+RV PSKT + P P
Sbjct: 147 ATAALNCSGVILGSLPIRVSPSKTPVRPRAP 177
>gi|125581461|gb|EAZ22392.1| hypothetical protein OsJ_06050 [Oryza sativa Japonica Group]
Length = 299
Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/209 (74%), Positives = 184/209 (88%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++R+G++QG+RR RT A +++ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRIC
Sbjct: 87 RRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRIC 146
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP+SVLRFAF+EF D+ GARAAL+L GTMLG+YPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 147 GDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 206
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST IAFVEFA AESAI
Sbjct: 207 EMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAIL 266
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALN SG VLG+LPIRVSPSKTPVRPR+PR
Sbjct: 267 ALNYSGMVLGTLPIRVSPSKTPVRPRSPR 295
>gi|218190389|gb|EEC72816.1| hypothetical protein OsI_06525 [Oryza sativa Indica Group]
Length = 287
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/209 (74%), Positives = 184/209 (88%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++R+G++QG+RR RT A +++ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRIC
Sbjct: 75 RRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRIC 134
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP+SVLRFAF+EF D+ GARAAL+L GTMLG+YPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 135 GDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 194
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST IAFVEFA AESAI
Sbjct: 195 EMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAIL 254
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALN SG VLG+LPIRVSPSKTPVRPR+PR
Sbjct: 255 ALNYSGMVLGTLPIRVSPSKTPVRPRSPR 283
>gi|115445273|ref|NP_001046416.1| Os02g0244600 [Oryza sativa Japonica Group]
gi|50252270|dbj|BAD28276.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113535947|dbj|BAF08330.1| Os02g0244600 [Oryza sativa Japonica Group]
Length = 359
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/209 (74%), Positives = 184/209 (88%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++R+G++QG+RR RT A +++ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRIC
Sbjct: 147 RRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRIC 206
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP+SVLRFAF+EF D+ GARAAL+L GTMLG+YPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 207 GDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 266
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST IAFVEFA AESAI
Sbjct: 267 EMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAIL 326
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALN SG VLG+LPIRVSPSKTPVRPR+PR
Sbjct: 327 ALNYSGMVLGTLPIRVSPSKTPVRPRSPR 355
>gi|357124236|ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835921 [Brachypodium
distachyon]
Length = 351
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/213 (71%), Positives = 179/213 (84%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++RNG++QG+RRM R +++ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRIC
Sbjct: 139 RRRNGFNQGRRRMGPRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRIC 198
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSV+RFAF+EF D+ GARAALSLAGT+LG+YPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 199 GDPNSVMRFAFIEFADDVGARAALSLAGTILGYYPVRVLPSKTAILPVNPKFLPRTEDEK 258
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM SRT+YCTNIDK V + +K FFE +CGEV RLRLLGDY HST IAFVEF AE AI
Sbjct: 259 EMVSRTVYCTNIDKNVPEDVVKKFFEGICGEVARLRLLGDYVHSTCIAFVEFVQAEGAIM 318
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
ALNCSG +LGSLP+RVSPSKTPVRPR+PR H
Sbjct: 319 ALNCSGMLLGSLPVRVSPSKTPVRPRSPRAMSH 351
>gi|357140847|ref|XP_003571974.1| PREDICTED: uncharacterized protein LOC100841044 [Brachypodium
distachyon]
Length = 350
Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/209 (74%), Positives = 184/209 (88%), Gaps = 1/209 (0%)
Query: 53 KRNG-YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+RNG ++QG+RRM RT + +++ +RRTVYVSD+DQQVTE++LA +F CGQVVDCRIC
Sbjct: 138 RRNGSFNQGRRRMGGRTRRSDREDSVRRTVYVSDVDQQVTEQKLAEVFSNCGQVVDCRIC 197
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP+SVLRFAF+EF D+ GARAAL+LAGTMLG+YPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 198 GDPHSVLRFAFIEFADDAGARAALNLAGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 257
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST IAFVEF AESAI
Sbjct: 258 EMVSRTVYCTNIDKKVTEDDVKIFFQRLCGKVSRLRLLGDYVHSTCIAFVEFTQAESAIL 317
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALN SG VLGSLPIRVSPSKTPVRPR+PR
Sbjct: 318 ALNYSGLVLGSLPIRVSPSKTPVRPRSPR 346
>gi|357127346|ref|XP_003565343.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 310
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 156/216 (72%), Positives = 180/216 (83%), Gaps = 1/216 (0%)
Query: 48 NTAFQKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
N + R+GY + G+RRMN R A +++ IRRTVYVS++D VTEE+LA +F CGQVV
Sbjct: 93 NQQHKMRSGYINHGRRRMNERARRADREDSIRRTVYVSELDHTVTEERLADIFANCGQVV 152
Query: 107 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
DCRICGDP+SVLRFAF+EF+DEEGARAAL+L GTMLGFYPVRVLPSKTAI PVNP FLPR
Sbjct: 153 DCRICGDPHSVLRFAFIEFSDEEGARAALNLGGTMLGFYPVRVLPSKTAILPVNPKFLPR 212
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
+EDE+EM RTIYCTNIDKKVTQ D+K FF+ +CGEV RLRLLGD HSTRIAFVEF A
Sbjct: 213 TEDEKEMVIRTIYCTNIDKKVTQLDVKSFFQELCGEVSRLRLLGDNVHSTRIAFVEFVNA 272
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 262
E AI ALNCSG +LG+LP+RVSPSKTPV+PR R P
Sbjct: 273 EGAIMALNCSGMILGTLPVRVSPSKTPVKPRINRVP 308
>gi|326514092|dbj|BAJ92196.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532980|dbj|BAJ89335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/209 (71%), Positives = 177/209 (84%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++RNG++QG+RRM R +++ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRIC
Sbjct: 139 RRRNGFNQGRRRMGVRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRIC 198
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSV+RFAF+EF D+ GARAAL+L GT+LGFYPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 199 GDPNSVMRFAFIEFADDVGARAALALGGTVLGFYPVRVLPSKTAILPVNPKFLPRTEDEK 258
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM SRT+YCTNIDK V + +K FFE +CGEV RLRLLGDY H+T IAFVEF AE AI
Sbjct: 259 EMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHATCIAFVEFVEAEGAIL 318
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALNCSG +LGSLP+RVSPSKTPVRPR+PR
Sbjct: 319 ALNCSGMLLGSLPVRVSPSKTPVRPRSPR 347
>gi|326502318|dbj|BAJ95222.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 317
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/210 (72%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 52 QKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
++RNGY + G+RR N R A ++E IRRTVYVS++D VTEE+LA +F CGQVVDCRI
Sbjct: 104 ERRNGYINHGRRRTNERARRADREESIRRTVYVSELDHTVTEERLAEIFANCGQVVDCRI 163
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDPNSV+RFAF+EF EEGARAAL+L GTMLGFYPVRVLPSKTAI PVNP FLP +EDE
Sbjct: 164 CGDPNSVMRFAFIEFAGEEGARAALNLGGTMLGFYPVRVLPSKTAILPVNPKFLPATEDE 223
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF AE AI
Sbjct: 224 KEMVIRTVYCTNIDKKVTQLDVKSFFEELCGEVSRLRLLGDNVHSTRIAFVEFVNAEGAI 283
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 284 QALNCSGMILGTLPVRVSPSKTPVKPRLNR 313
>gi|242051635|ref|XP_002454963.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
gi|241926938|gb|EES00083.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
Length = 298
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/214 (71%), Positives = 178/214 (83%), Gaps = 1/214 (0%)
Query: 48 NTAFQKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
N ++ NGY +QG+RR N R A++++ IRRTVYVS++D VTEE+LA +F TCGQVV
Sbjct: 81 NQHRRRGNGYINQGRRRTNDRVRRAEREDSIRRTVYVSELDHTVTEERLADIFATCGQVV 140
Query: 107 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
DCRICGDP+SVLRFAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTAI PVNP FLPR
Sbjct: 141 DCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFLPR 200
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
+EDE+EM RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF A
Sbjct: 201 TEDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHA 260
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
E AI ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 261 EGAIMALNCSGMILGTLPVRVSPSKTPVKPRVNR 294
>gi|62867578|emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
Length = 201
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/197 (76%), Positives = 167/197 (84%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 123
MN R AQ+++ IRRTVYV++ID VTEEQLA LF GQVVDCRICGDP+S LRFAFV
Sbjct: 1 MNNRAYKAQREDSIRRTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFV 60
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 183
EF DE ARAALSL GT+LGF P++VLPSKTAI PVNPTFLPRSEDEREMC+RT+YCTNI
Sbjct: 61 EFADEYSARAALSLCGTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNI 120
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 243
DKKVTQ D+K FFE+ CGEV RLRLLGD+ HSTRIAFVEF MAESAI AL+C G +LGS
Sbjct: 121 DKKVTQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAILALDCCGEILGSQ 180
Query: 244 PIRVSPSKTPVRPRAPR 260
IRVSPSKTPVRPR PR
Sbjct: 181 RIRVSPSKTPVRPRLPR 197
>gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein from Arabidopsis
thaliana gi|2129727 and contains RNA recognition
PF|00076 domain. ESTs gb|H37317, gb|F14415, gb|AA651290
come from this gene [Arabidopsis thaliana]
Length = 829
Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 146/185 (78%), Positives = 162/185 (87%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 122
R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQVVDCRICGDPNSVLRFAF
Sbjct: 57 RLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAF 116
Query: 123 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
VEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLPRSEDEREMCSRTIYCTN
Sbjct: 117 VEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTN 176
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGS 242
+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAMAESA+AALNCSG VLGS
Sbjct: 177 VDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGS 236
Query: 243 LPIRV 247
PI V
Sbjct: 237 QPISV 241
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y ++ID+ VT+ + F S CG+V R+ GD R AFVEF+ + A +AL+
Sbjct: 73 RTVYVSDIDQSVTEEGLAGLFSS-CGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSL 131
Query: 236 SGAVLGSLPIRVSPSKTPVRPRAP 259
G ++G P+RV PSKT + P P
Sbjct: 132 GGTMIGYYPVRVLPSKTAILPVNP 155
>gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340299|gb|EFH70716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 769
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/186 (79%), Positives = 163/186 (87%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 122
R+ R S AQ++ IRRTVYVSDIDQ VTEE LA LF +CGQVVDCRICGDPNSVLRFAF
Sbjct: 60 RLPGRASKAQREVSIRRTVYVSDIDQSVTEEVLAGLFSSCGQVVDCRICGDPNSVLRFAF 119
Query: 123 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
VEF+D++GARAALSL GTM+G+YPVRVLPSKTAI PVNPTFLPRSEDEREMC+RTIYCTN
Sbjct: 120 VEFSDDQGARAALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTN 179
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGS 242
+DK T+ +K FF+S CGEV RLRLLGD HSTRIAFVEFAMAESA+AALNCSG VLGS
Sbjct: 180 VDKNATEDVVKTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGS 239
Query: 243 LPIRVS 248
PIR+S
Sbjct: 240 QPIRLS 245
>gi|242093252|ref|XP_002437116.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
gi|241915339|gb|EER88483.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
Length = 364
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 179/210 (85%), Gaps = 1/210 (0%)
Query: 52 QKRNGYSQGKRRMNCRTSN-AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
++RNG+ QG+RRM + +++ +RRTVYVSDIDQ VTE++LA +F TCGQVVDCRI
Sbjct: 151 RRRNGFIQGRRRMMGGRPRRSDREDSVRRTVYVSDIDQHVTEQKLAEVFSTCGQVVDCRI 210
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDPNSVLRFAF+EF D+ GA+AAL+L GT+LGFYPV+VLPSKTAI PVNP FLPR+EDE
Sbjct: 211 CGDPNSVLRFAFIEFADDVGAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPRTEDE 270
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
+EM SRT+YCTNIDKK+ + ++K FFE CGEV RLRLLGDY HST IAFVEF A+SAI
Sbjct: 271 KEMVSRTVYCTNIDKKIGEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSAI 330
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALNCSG VLG+LP+RVSPSKTPVRPR+PR
Sbjct: 331 LALNCSGIVLGTLPVRVSPSKTPVRPRSPR 360
>gi|226507984|ref|NP_001149092.1| LOC100282713 [Zea mays]
gi|195624680|gb|ACG34170.1| CID11 [Zea mays]
gi|414875767|tpg|DAA52898.1| TPA: CID11 [Zea mays]
Length = 299
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/209 (71%), Positives = 175/209 (83%), Gaps = 1/209 (0%)
Query: 53 KRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+ NGY +QG+RR N R A +++ IRRTVYVS++D VTEE+LA +F TCGQVVDCRIC
Sbjct: 87 RGNGYINQGRRRTNGRVRRADREDSIRRTVYVSELDHTVTEERLADIFTTCGQVVDCRIC 146
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDP+SVLRFAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTAI PVNP FLPR++DE+
Sbjct: 147 GDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFLPRTDDEK 206
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF AE AI
Sbjct: 207 EMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAIM 266
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 267 ALNCSGMILGTLPVRVSPSKTPVKPRVNR 295
>gi|449438949|ref|XP_004137250.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
gi|449483120|ref|XP_004156498.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 306
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/206 (71%), Positives = 175/206 (84%), Gaps = 2/206 (0%)
Query: 58 SQGKRRMNC-RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPN 115
+QG+RRMN R+ AQQ+E IRRTVYVSDID+ V+EE+LA +F CG V DCRICGDP+
Sbjct: 95 NQGRRRMNNNRSVRAQQEESIRRTVYVSDIDKDVSEEELAKVFREFCGYVNDCRICGDPH 154
Query: 116 SVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 175
SVLRFAFVEF +E ARAA+ L+GT++G YPV+VLPSKTAI PVNPTFLP+S DE +MC+
Sbjct: 155 SVLRFAFVEFANEHSARAAVGLSGTVVGSYPVKVLPSKTAILPVNPTFLPKSNDEWDMCT 214
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RTIYCTNIDKKV+Q ++K FFE+ CGEV RLRLLGD HSTRIAFVEFA+AE+A+ ALNC
Sbjct: 215 RTIYCTNIDKKVSQAEVKSFFETSCGEVTRLRLLGDQLHSTRIAFVEFALAETALQALNC 274
Query: 236 SGAVLGSLPIRVSPSKTPVRPRAPRP 261
SG +LG+ PIRVSPSKTPVRPR RP
Sbjct: 275 SGMILGAQPIRVSPSKTPVRPRVTRP 300
>gi|297829996|ref|XP_002882880.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
gi|297328720|gb|EFH59139.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 172/215 (80%), Gaps = 6/215 (2%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+KR YSQG+RR+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF CGQVVDCRIC
Sbjct: 122 RKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRIC 181
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVL----PSKTAIAPVNPTFLPRS 167
GDP+SVLRFAFVEF D++GAR ALSL GTMLGFYPVRV S++ I+ S
Sbjct: 182 GDPHSVLRFAFVEFADDQGAREALSLGGTMLGFYPVRVKNCHSTSESHISSKGK--CSDS 239
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 227
EDEREMC+RTIYCTNIDKKV+Q D++ FFES CGEV RLRLLGD HSTRIAFVEF +A+
Sbjct: 240 EDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFTLAD 299
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 262
SA+ ALNCSG V+GS PIRVSPSKTPVRPR RPP
Sbjct: 300 SALRALNCSGMVVGSQPIRVSPSKTPVRPRITRPP 334
>gi|414868267|tpg|DAA46824.1| TPA: hypothetical protein ZEAMMB73_802900 [Zea mays]
Length = 328
Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 143/172 (83%), Positives = 156/172 (90%)
Query: 89 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 148
+VTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTD+EGARAAL+L+G MLG+YPV
Sbjct: 152 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDDEGARAALNLSGNMLGYYPVN 211
Query: 149 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 208
VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDK V Q D+KLFFES+CGEV RLRL
Sbjct: 212 VLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRL 271
Query: 209 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
LGDY HSTRIAFVEF MAESA AALN SG VLGSLPIRV+PSKTPVRPR PR
Sbjct: 272 LGDYHHSTRIAFVEFVMAESATAALNSSGVVLGSLPIRVNPSKTPVRPRDPR 323
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
+ E+ RT+Y ++ID+ V + L F + CG+V R+ GD + R AFVEF E
Sbjct: 232 DEREMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAES 291
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 161
A AAL+ +G +LG P+RV PSKT + P +P
Sbjct: 292 ATAALNSSGVVLGSLPIRVNPSKTPVRPRDP 322
>gi|226530673|ref|NP_001141946.1| uncharacterized protein LOC100274095 [Zea mays]
gi|194706550|gb|ACF87359.1| unknown [Zea mays]
gi|195626910|gb|ACG35285.1| CID11 [Zea mays]
gi|413947723|gb|AFW80372.1| CID11 [Zea mays]
Length = 302
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 149/214 (69%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Query: 48 NTAFQKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
N ++ NGY +QG+RR N R A +++ +RRTVYVS++D VTEE+LA +F TCG VV
Sbjct: 85 NQQRKRGNGYINQGRRRTNDRLRRADREDSVRRTVYVSELDHTVTEERLADIFATCGHVV 144
Query: 107 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
DCRICGDP+SVLRFAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTAI PVNP FLPR
Sbjct: 145 DCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFLPR 204
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
++DE+EM RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF A
Sbjct: 205 TDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHA 264
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
E AI ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 265 EGAIMALNCSGMILGTLPVRVSPSKTPVKPRVNR 298
>gi|297812631|ref|XP_002874199.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
gi|297320036|gb|EFH50458.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 305 bits (782), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 173/204 (84%)
Query: 54 RNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 113
R + QG+R +N +T+ Q ++VI+RTVYVSDIDQQVTEEQLA+LFL+CGQVVDCRICGD
Sbjct: 105 RRSFGQGRRWINKKTNLVQNEDVIKRTVYVSDIDQQVTEEQLASLFLSCGQVVDCRICGD 164
Query: 114 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
S+LRFAF+EFTD EGAR+AL +GT+ G +P+RV SKTAIAPVNP+FLPRSE+E E
Sbjct: 165 HKSILRFAFIEFTDAEGARSALRKSGTVFGSHPIRVHISKTAIAPVNPSFLPRSEEELEK 224
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
C +T+YCTNIDK+VT+ +++ FF++VCGEV LRLLGD+ H TRIAFVEF +AESAI+AL
Sbjct: 225 CGKTVYCTNIDKQVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISAL 284
Query: 234 NCSGAVLGSLPIRVSPSKTPVRPR 257
N SG VLG LPIR+SPSKTPVRP
Sbjct: 285 NYSGVVLGELPIRISPSKTPVRPH 308
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 162 TFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFV 221
T L ++ED + RT+Y ++ID++VT+ + F S CG+V R+ GD++ R AF+
Sbjct: 119 TNLVQNED---VIKRTVYVSDIDQQVTEEQLASLFLS-CGQVVDCRICGDHKSILRFAFI 174
Query: 222 EFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
EF AE A +AL SG V GS PIRV SKT + P P
Sbjct: 175 EFTDAEGARSALRKSGTVFGSHPIRVHISKTAIAPVNP 212
>gi|212274583|ref|NP_001130716.1| hypothetical protein [Zea mays]
gi|194689926|gb|ACF79047.1| unknown [Zea mays]
gi|413954111|gb|AFW86760.1| hypothetical protein ZEAMMB73_977651 [Zea mays]
Length = 365
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 177/210 (84%), Gaps = 1/210 (0%)
Query: 52 QKRNGYSQGKRRM-NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
++RNG+ QG+RRM R A +++ +RRTVYVSD+DQ VTE++LA +F TCGQVVDCRI
Sbjct: 152 RRRNGFIQGRRRMMGARPRRADREDSVRRTVYVSDVDQHVTEQKLAEVFSTCGQVVDCRI 211
Query: 111 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
CGDPNSVLRFAF+EF D+ A+AAL+L GT+LGFYPV+VLPSKTAI PVNP FLP ++DE
Sbjct: 212 CGDPNSVLRFAFIEFADDVAAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPHTDDE 271
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
+EM SRT+YCTNIDKK+ + ++K FFE CGEV RLRLLGDY HST IAFVEF A+SAI
Sbjct: 272 KEMVSRTVYCTNIDKKIAEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSAI 331
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALNCSG VLG+LP+RVSPSKTPVR R+PR
Sbjct: 332 LALNCSGIVLGTLPVRVSPSKTPVRSRSPR 361
>gi|218198344|gb|EEC80771.1| hypothetical protein OsI_23281 [Oryza sativa Indica Group]
Length = 372
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/220 (67%), Positives = 178/220 (80%), Gaps = 7/220 (3%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++R+ ++QG+RRM R +++ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRIC
Sbjct: 153 RRRSSFNQGRRRMGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRIC 212
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSVLRFAF+EF D+ GARAAL+L GT+LG+YPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 213 GDPNSVLRFAFIEFADDVGARAALTLGGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 272
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM SRT+YCTNIDK V + +K FFE +CGEV RLRLLGDY HST IAFVEF A+SAI
Sbjct: 273 EMVSRTVYCTNIDKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSAIL 332
Query: 232 ALNCSGAVLGSLPIR-------VSPSKTPVRPRAPRPPLH 264
AL+CSG VLG+LP+R VSPSKTPVRPR+PR H
Sbjct: 333 ALSCSGMVLGALPVRQANTPYAVSPSKTPVRPRSPRVTSH 372
>gi|195626410|gb|ACG35035.1| CID11 [Zea mays]
Length = 378
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/187 (75%), Positives = 164/187 (87%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
++ +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAF+EF+D+ GARA
Sbjct: 188 EDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSDDAGARA 247
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL+LAGT+LG YPVRVLPSKTAI PVNP FLP+++DE+EM SRT+YCTNIDKKVT+ D+K
Sbjct: 248 ALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDKKVTEEDVK 307
Query: 194 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP 253
FF+ CG+V RLRLL D HST IAFVEFA AESAI ALN SG VLGSLPIRVSPSKTP
Sbjct: 308 GFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMALNFSGMVLGSLPIRVSPSKTP 367
Query: 254 VRPRAPR 260
VRPR+PR
Sbjct: 368 VRPRSPR 374
>gi|15238531|ref|NP_197832.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
gi|9758532|dbj|BAB08927.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332005928|gb|AED93311.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
Length = 320
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 170/202 (84%)
Query: 54 RNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 113
R + +G+ + +T+ Q +++I+RTVYVSDID QVTEEQLA+LFL+CGQVVDCR+CGD
Sbjct: 112 RRNFGKGRPWITKKTNLVQNEDMIKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGD 171
Query: 114 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
S+LRFAF+EFTD EGAR+AL +GTM G +P+RV SKTAIAPVNP+FLP+S+DE E
Sbjct: 172 YKSILRFAFIEFTDAEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNPSFLPQSKDELEK 231
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
C +T+YCTNIDK+VT+ +++ FF++VCGEV LRLLGD+ H TRIAFVEF +AESAI+AL
Sbjct: 232 CGKTVYCTNIDKEVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISAL 291
Query: 234 NCSGAVLGSLPIRVSPSKTPVR 255
NCSG VLG LPIRVSPSKTPVR
Sbjct: 292 NCSGVVLGELPIRVSPSKTPVR 313
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 162 TFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFV 221
T L ++ED M RT+Y ++ID +VT+ + F S CG+V R+ GDY+ R AF+
Sbjct: 126 TNLVQNED---MIKRTVYVSDIDNQVTEEQLASLFLS-CGQVVDCRMCGDYKSILRFAFI 181
Query: 222 EFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
EF AE A +AL SG + GS PIRV SKT + P P
Sbjct: 182 EFTDAEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNP 219
>gi|212274823|ref|NP_001130545.1| uncharacterized protein LOC100191644 [Zea mays]
gi|194689440|gb|ACF78804.1| unknown [Zea mays]
gi|224030729|gb|ACN34440.1| unknown [Zea mays]
gi|413926010|gb|AFW65942.1| CID11 [Zea mays]
Length = 379
Score = 296 bits (757), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 141/187 (75%), Positives = 164/187 (87%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
++ +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAF+EF+D+ GARA
Sbjct: 189 EDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSDDGGARA 248
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL+LAGT+LG YPVRVLPSKTAI PVNP FLP+++DE+EM SRT+YCTNIDKKVT+ D+K
Sbjct: 249 ALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDKKVTEEDVK 308
Query: 194 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP 253
FF+ CG+V RLRLL D HST IAFVEFA AESAI ALN SG VLGSLPIRVSPSKTP
Sbjct: 309 GFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMALNFSGMVLGSLPIRVSPSKTP 368
Query: 254 VRPRAPR 260
VRPR+PR
Sbjct: 369 VRPRSPR 375
>gi|147818437|emb|CAN60729.1| hypothetical protein VITISV_013180 [Vitis vinifera]
Length = 642
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 135/176 (76%), Positives = 156/176 (88%)
Query: 53 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 112
+RN Y+QG+RR++ R AQ+++ IRRTVYVSDIDQ VTEE+LA LF +CGQVVDCR+CG
Sbjct: 324 RRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCG 383
Query: 113 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE 172
DP+SVLRFAFVEF DE GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLPRSEDERE
Sbjct: 384 DPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDERE 443
Query: 173 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES 228
MC+RT+YCTNIDKKV+Q ++K FFE CGEV RLRLLGD+ HSTRIAFVEFAM +S
Sbjct: 444 MCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMGQS 499
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y ++ID+ VT+ + F S CG+V R+ GD R AFVEFA A AALN
Sbjct: 350 RTVYVSDIDQHVTEERLAALFSS-CGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNL 408
Query: 236 SGAVLGSLPIRVSPSKTPVRPRAP 259
G +LG P+RV PSKT + P P
Sbjct: 409 GGTMLGYYPVRVLPSKTAILPVNP 432
>gi|224106628|ref|XP_002333653.1| predicted protein [Populus trichocarpa]
gi|222837945|gb|EEE76310.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/155 (82%), Positives = 145/155 (93%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
AQQ+E++RRTVYVSDIDQQVTEEQLA LF+ CGQVVDCRICGDP SVLRFAF+EFTDEEG
Sbjct: 2 AQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEEG 61
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
A+AALSL+GTMLG+YPV+VLPSKTAIAPVNPTFLPR++DEREMC+RTIYCTNID+ +TQ
Sbjct: 62 AQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQA 121
Query: 191 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
+IKLFFES+CGEV LRLLGD+ H TRIAFVEF M
Sbjct: 122 NIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVM 156
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 170 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 229
+ E+ RT+Y ++ID++VT+ + F + CG+V R+ GD + R AF+EF E A
Sbjct: 4 QEEIVRRTVYVSDIDQQVTEEQLAALFIN-CGQVVDCRICGDPKSVLRFAFIEFTDEEGA 62
Query: 230 IAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
AAL+ SG +LG P++V PSKT + P P
Sbjct: 63 QAALSLSGTMLGYYPVKVLPSKTAIAPVNP 92
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEF 125
N + E+ RT+Y ++ID+ +T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 98 NDDEREMCARTIYCTNIDRNLTQANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEF 154
>gi|222635710|gb|EEE65842.1| hypothetical protein OsJ_21610 [Oryza sativa Japonica Group]
Length = 367
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 166/210 (79%), Gaps = 6/210 (2%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
++R+ ++QG+RRM R +++ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRIC
Sbjct: 150 RRRSSFNQGRRRMGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRIC 209
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNSVLRFAF+EF D+ GARAAL+L GT+LG+YPVRVLPSKTAI PVNP FLPR+EDE+
Sbjct: 210 GDPNSVLRFAFIEFADDVGARAALTLGGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 269
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EM SRT+YCTNIDK V + +K FFE +CGEV RLRLLGDY HST IAFVEF A+SAI
Sbjct: 270 EMVSRTVYCTNIDKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSAIL 329
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRP 261
AL+CSG VLG+LP PV+ P P
Sbjct: 330 ALSCSGMVLGALP------GEPVKDTGPAP 353
>gi|53793069|dbj|BAD54280.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|53793076|dbj|BAD54286.1| putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 206
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/198 (67%), Positives = 155/198 (78%), Gaps = 6/198 (3%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 123
M R +++ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAF+
Sbjct: 1 MGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFI 60
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 183
EF D+ GARAAL+L GT+LG+YPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNI
Sbjct: 61 EFADDVGARAALTLGGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNI 120
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 243
DK V + +K FFE +CGEV RLRLLGDY HST IAFVEF A+SAI AL+CSG VLG+L
Sbjct: 121 DKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSAILALSCSGMVLGAL 180
Query: 244 PIRVSPSKTPVRPRAPRP 261
P PV+ P P
Sbjct: 181 P------GEPVKDTGPAP 192
>gi|326508995|dbj|BAJ86890.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/169 (75%), Positives = 143/169 (84%)
Query: 96 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 155
A +F CGQVVDCRICGDPNSV+RFAF+EF D+ GARAAL+L GT+LGFYPVRVLPSKTA
Sbjct: 1 AEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALALGGTVLGFYPVRVLPSKTA 60
Query: 156 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 215
I PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +CGEV RLRLLGDY H+
Sbjct: 61 ILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHA 120
Query: 216 TRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
T IAFVEF AE AI ALNCSG +LGSLP+RVSPSKTPVRPR+PR H
Sbjct: 121 TCIAFVEFVEAEGAILALNCSGMLLGSLPVRVSPSKTPVRPRSPRVVSH 169
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
+ E++ RTVY ++ID+ V E+ + F CG+V R+ GD AFVEF + EG
Sbjct: 74 DEKEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHATCIAFVEFVEAEG 133
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 161
A AL+ +G +LG PVRV PSKT + P +P
Sbjct: 134 AILALNCSGMLLGSLPVRVSPSKTPVRPRSP 164
>gi|159464635|ref|XP_001690547.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158280047|gb|EDP05806.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 464
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/204 (62%), Positives = 153/204 (75%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
Q+ +G G++ + +E IRRTVY+S +D +TEE LA F CG+++DCRIC
Sbjct: 168 QQHSGRGPGQQAQKKKRPQKGLEENIRRTVYISYVDCSLTEENLAAFFSDCGRILDCRIC 227
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GDPNS +RFAF+EF D E A AL G++LG P+RVLPSKTAI PVN +PRS DE
Sbjct: 228 GDPNSAMRFAFIEFMDVECAAKALEKTGSVLGNSPLRVLPSKTAIMPVNQELMPRSADEV 287
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E CSRT+Y NIDKKV + D+K FFES+CG+V R+RLLGDY HSTRIAFVEF AE A+A
Sbjct: 288 ERCSRTVYAANIDKKVDKNDVKAFFESLCGKVSRIRLLGDYAHSTRIAFVEFHHAEGALA 347
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVR 255
ALNCSGA+LGSLPIRVSPSKTPVR
Sbjct: 348 ALNCSGALLGSLPIRVSPSKTPVR 371
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
E RT+Y + +D +T+ ++ FF S CG + R+ GD + R AF+EF E A
Sbjct: 190 EENIRRTVYISYVDCSLTEENLAAFF-SDCGRILDCRICGDPNSAMRFAFIEFMDVECAA 248
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVRP 256
AL +G+VLG+ P+RV PSKT + P
Sbjct: 249 KALEKTGSVLGNSPLRVLPSKTAIMP 274
>gi|302830029|ref|XP_002946581.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
gi|300268327|gb|EFJ52508.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
Length = 238
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/182 (67%), Positives = 145/182 (79%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+E I+RTVY+S +D +TEE LA F CG++VDCRICGDPNS +RFAF+EF D E A
Sbjct: 12 EENIKRTVYISYVDCTLTEENLAAFFSDCGRIVDCRICGDPNSAMRFAFIEFADVEFATK 71
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL G++LG P+RVLPSKTAI PVN +PRS DE E CSRT+Y NIDKKV + D++
Sbjct: 72 ALEKTGSVLGKSPLRVLPSKTAIMPVNQELMPRSPDEVERCSRTVYAANIDKKVDKNDVR 131
Query: 194 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP 253
FFES+CG+V R+RLLGDY HSTRIAFVEF AE A+AALNCSGA+LGSLPIRVSPSKTP
Sbjct: 132 AFFESLCGKVSRIRLLGDYAHSTRIAFVEFQHAEGALAALNCSGALLGSLPIRVSPSKTP 191
Query: 254 VR 255
V+
Sbjct: 192 VK 193
>gi|413921445|gb|AFW61377.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 315
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 118/141 (83%), Positives = 131/141 (92%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 124
N RTS AQ+DE IRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+E
Sbjct: 142 NSRTSMAQRDEAIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIE 201
Query: 125 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
FTDEEGARAAL+L+GT+LG+YPV+VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNID
Sbjct: 202 FTDEEGARAALNLSGTVLGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNID 261
Query: 185 KKVTQGDIKLFFESVCGEVQR 205
KKVTQ D+KLFFES+CGEV R
Sbjct: 262 KKVTQADLKLFFESICGEVGR 282
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF E A A
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 210
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRP 256
ALN SG VLG P++V PSKT + P
Sbjct: 211 ALNLSGTVLGYYPVKVLPSKTAIAP 235
>gi|413916285|gb|AFW56217.1| hypothetical protein ZEAMMB73_723080 [Zea mays]
Length = 246
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/143 (83%), Positives = 130/143 (90%), Gaps = 4/143 (2%)
Query: 87 DQQ----VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTML 142
DQQ VTEE LA LF+ CGQVVDC +CGDPNSVLRF F+EFTDEEGARAAL+L+GTML
Sbjct: 16 DQQIVFKVTEENLAALFINCGQVVDCHMCGDPNSVLRFTFIEFTDEEGARAALNLSGTML 75
Query: 143 GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 202
G+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGE
Sbjct: 76 GYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 135
Query: 203 VQRLRLLGDYQHSTRIAFVEFAM 225
V RLRLLGDY HSTRIAFVEF M
Sbjct: 136 VFRLRLLGDYHHSTRIAFVEFVM 158
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 245
KVT+ ++ F + CG+V + GD R F+EF E A AALN SG +LG P+
Sbjct: 22 KVTEENLAALFIN-CGQVVDCHMCGDPNSVLRFTFIEFTDEEGARAALNLSGTMLGYYPV 80
Query: 246 RVSPSKTPVRPRAP 259
RV PSKT + P P
Sbjct: 81 RVLPSKTAIAPVNP 94
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEF 125
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF
Sbjct: 102 DEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEF 156
>gi|307105908|gb|EFN54155.1| hypothetical protein CHLNCDRAFT_13101, partial [Chlorella
variabilis]
Length = 187
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 144/187 (77%)
Query: 69 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 128
S+ + +E +R TVY+SDI VTE QLA F CGQ+VDCR+CGDPNS +RFAF+EF E
Sbjct: 1 SSRRNEEKVRCTVYISDISDTVTEAQLAAFFQDCGQLVDCRVCGDPNSSMRFAFIEFMQE 60
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
+ A+ AL +G MLG +P+RV PSKTAI PVN T+LPRS +ERE+ +RT++ NID+ V
Sbjct: 61 DSAQQALGKSGAMLGDFPIRVSPSKTAIVPVNNTYLPRSTEERELVARTVFVGNIDRVVE 120
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
+ + FF+++CG V ++RLLGD QHS +IAF+EF AESA AAL SGA+LG+LP+RVS
Sbjct: 121 REQLSEFFQNLCGPVSKIRLLGDSQHSAKIAFIEFVTAESARAALKLSGALLGTLPLRVS 180
Query: 249 PSKTPVR 255
PSKTPVR
Sbjct: 181 PSKTPVR 187
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
R +E+ C T+Y ++I VT+ + FF+ CG++ R+ GD S R AF+EF
Sbjct: 3 RRNEEKVRC--TVYISDISDTVTEAQLAAFFQD-CGQLVDCRVCGDPNSSMRFAFIEFMQ 59
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPVRP 256
+SA AL SGA+LG PIRVSPSKT + P
Sbjct: 60 EDSAQQALGKSGAMLGDFPIRVSPSKTAIVP 90
>gi|222641306|gb|EEE69438.1| hypothetical protein OsJ_28831 [Oryza sativa Japonica Group]
Length = 353
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 145/204 (71%), Gaps = 2/204 (0%)
Query: 54 RNGYSQGKRR-MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRIC 111
RN QG+ + R AQ++E +RRT++VSDID VTE+ LA LF + C VVDCRIC
Sbjct: 134 RNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRIC 193
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GD +S LRFAF+EF DE A AAL L G +LG P+RV PSKTAI PVNP+FLP+SE ER
Sbjct: 194 GDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNPSFLPQSEAER 253
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMCSRTIYCTNIDK V D+K F E G+V RL+LLGD H TRIAF+EFA + AI
Sbjct: 254 EMCSRTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEVDGAIN 313
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVR 255
ALN SG PIRV PSKTP+R
Sbjct: 314 ALNSSGIFASGQPIRVCPSKTPIR 337
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
A AAL+ G VLG P+RVSPSKT + P P
Sbjct: 210 ESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNP 243
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC----GQVVDCRICGDPNSVLRFAFVEFTDE 128
+ E+ RT+Y ++ID+ V + L C GQV ++ GD R AF+EF +
Sbjct: 252 EREMCSRTIYCTNIDKSV---NVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEV 308
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPV 159
+GA AL+ +G P+RV PSKT I V
Sbjct: 309 DGAINALNSSGIFASGQPIRVCPSKTPIRSV 339
>gi|218201903|gb|EEC84330.1| hypothetical protein OsI_30837 [Oryza sativa Indica Group]
Length = 353
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 145/204 (71%), Gaps = 2/204 (0%)
Query: 54 RNGYSQGKRR-MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRIC 111
RN QG+ + R AQ++E +RRT++VSDID VTE+ LA LF + C VVDCRIC
Sbjct: 134 RNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRIC 193
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GD +S LRFAF+EF DE A AAL L G +LG P+RV PSKTAI PVNP+FLP+SE ER
Sbjct: 194 GDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNPSFLPQSEAER 253
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
EMCSRTIYCTNIDK V D+K F E G+V RL+LLGD H TRIAF+EFA + AI
Sbjct: 254 EMCSRTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEVDGAIN 313
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVR 255
ALN SG PIRV PSKTP+R
Sbjct: 314 ALNSSGIFASGQPIRVCPSKTPIR 337
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
A AAL+ G VLG P+RVSPSKT + P P
Sbjct: 210 ESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNP 243
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC----GQVVDCRICGDPNSVLRFAFVEFTDE 128
+ E+ RT+Y ++ID+ V + L C GQV ++ GD R AF+EF +
Sbjct: 252 EREMCSRTIYCTNIDKSV---NVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEV 308
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPV 159
+GA AL+ +G P+RV PSKT I V
Sbjct: 309 DGAINALNSSGIFASGQPIRVCPSKTPIRSV 339
>gi|413941690|gb|AFW74339.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 286
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 120/128 (93%)
Query: 60 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 119
+RR N RTS AQ+DE+IRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLR
Sbjct: 124 ARRRTNSRTSMAQRDEIIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLR 183
Query: 120 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
FAF+EFTDEEGARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIY
Sbjct: 184 FAFIEFTDEEGARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIY 243
Query: 180 CTNIDKKV 187
CTNIDKKV
Sbjct: 244 CTNIDKKV 251
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E+ RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF E A A
Sbjct: 139 EIIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 197
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
ALN SG VLG P+RV PSKT + P P
Sbjct: 198 ALNLSGTVLGYYPVRVLPSKTAIAPVNP 225
>gi|388517685|gb|AFK46904.1| unknown [Lotus japonicus]
Length = 124
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/124 (85%), Positives = 117/124 (94%)
Query: 141 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 200
MLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK+TQ D+K FFES+C
Sbjct: 1 MLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQSDVKNFFESIC 60
Query: 201 GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
GEVQRLRLLGD+ HSTRIAFVEF +AESAIAAL+CSG +LGSLPIRVSPSKTPVR R+PR
Sbjct: 61 GEVQRLRLLGDHNHSTRIAFVEFKVAESAIAALSCSGVILGSLPIRVSPSKTPVRSRSPR 120
Query: 261 PPLH 264
P+H
Sbjct: 121 SPMH 124
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 128
+ + E+ RT+Y ++ID+++T+ + F + CG+V R+ GD N R AFVEF
Sbjct: 27 SEDEREMCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVA 86
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 161
E A AALS +G +LG P+RV PSKT + +P
Sbjct: 87 ESAIAALSCSGVILGSLPIRVSPSKTPVRSRSP 119
>gi|384248219|gb|EIE21704.1| hypothetical protein COCSUDRAFT_56895 [Coccomyxa subellipsoidea
C-169]
Length = 231
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 146/206 (70%), Gaps = 5/206 (2%)
Query: 50 AFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 109
+FQK++ + G R S + R+ VTE LA +F G++VDCR
Sbjct: 28 SFQKQDVSAPGSLHTFQRQSRPR-----RKAALQKQFGGNVTEAALADVFKHSGKIVDCR 82
Query: 110 ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSED 169
+CGDPNS +RFAF+EF DEE + A+ L GTMLG +P+RV+PSKTAI PVN +FLPR+++
Sbjct: 83 VCGDPNSAMRFAFIEFADEEAIQRAIKLNGTMLGKFPIRVMPSKTAIVPVNNSFLPRTQE 142
Query: 170 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 229
E E C+RT+Y NIDKKV + ++++FF+++CG V ++RLL DY H + IAFVEFA +SA
Sbjct: 143 ELERCARTVYIANIDKKVDREEVRVFFQTLCGPVTKIRLLSDYNHVSSIAFVEFADFKSA 202
Query: 230 IAALNCSGAVLGSLPIRVSPSKTPVR 255
AL+CSGA+LGSLPIRV+PSK PVR
Sbjct: 203 RKALDCSGALLGSLPIRVTPSKAPVR 228
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 162 TFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFV 221
TF +S R+ + + N VT+ + F+ G++ R+ GD + R AF+
Sbjct: 42 TFQRQSRPRRKAALQKQFGGN----VTEAALADVFKH-SGKIVDCRVCGDPNSAMRFAFI 96
Query: 222 EFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRP 256
EFA E+ A+ +G +LG PIRV PSKT + P
Sbjct: 97 EFADEEAIQRAIKLNGTMLGKFPIRVMPSKTAIVP 131
>gi|116789825|gb|ABK25401.1| unknown [Picea sitchensis]
Length = 124
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 103/124 (83%), Positives = 115/124 (92%)
Query: 141 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 200
MLG+YPVRVLPSKTAI PVNPTFLPRSEDEREMC+RTIYCTNIDKKV+Q ++++FFES+C
Sbjct: 1 MLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQVEVRMFFESLC 60
Query: 201 GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
GEV RLRLLGD+ HSTRIAFVEF MAESAI ALNCSGA++GSLPIRVSPSKTPVRPR P
Sbjct: 61 GEVSRLRLLGDHVHSTRIAFVEFVMAESAILALNCSGAIVGSLPIRVSPSKTPVRPRIPH 120
Query: 261 PPLH 264
P +H
Sbjct: 121 PTMH 124
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 128
+ + E+ RT+Y ++ID++V++ ++ F + CG+V R+ GD R AFVEF
Sbjct: 27 SEDEREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMA 86
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 161
E A AL+ +G ++G P+RV PSKT + P P
Sbjct: 87 ESAILALNCSGAIVGSLPIRVSPSKTPVRPRIP 119
>gi|384245723|gb|EIE19216.1| hypothetical protein COCSUDRAFT_38408 [Coccomyxa subellipsoidea
C-169]
Length = 200
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 131/174 (75%)
Query: 82 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 141
+ S Q+VTE LA +F G++VDCR+CGDPNS +RFAF+EF DE + A+ L G
Sbjct: 24 WQSPFHQKVTEASLADVFKDSGKIVDCRVCGDPNSAMRFAFIEFADERAVQQAIKLNGAK 83
Query: 142 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 201
LG YP+RV+PSKTAI PVN +FLPR++ E E C+RT+Y NIDK+V + D++ FFE++CG
Sbjct: 84 LGKYPIRVMPSKTAIVPVNTSFLPRTQKELECCARTVYVANIDKRVDREDVRQFFETLCG 143
Query: 202 EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
V+++RLL DY + IAFVEFA +SA AL+CSGA+LG LPIRV+PSK PVR
Sbjct: 144 PVKKIRLLSDYNKVSSIAFVEFAGFDSARKALDCSGALLGMLPIRVTPSKAPVR 197
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 137
RTVYV++ID++V E + F T CG V R+ D N V AFVEF + AR AL
Sbjct: 118 RTVYVANIDKRVDREDVRQFFETLCGPVKKIRLLSDYNKVSSIAFVEFAGFDSARKALDC 177
Query: 138 AGTMLGFYPVRVLPSKTAI 156
+G +LG P+RV PSK +
Sbjct: 178 SGALLGMLPIRVTPSKAPV 196
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLP 244
+KVT+ + F+ G++ R+ GD + R AF+EFA + A+ +GA LG P
Sbjct: 30 QKVTEASLADVFKD-SGKIVDCRVCGDPNSAMRFAFIEFADERAVQQAIKLNGAKLGKYP 88
Query: 245 IRVSPSKTPVRP 256
IRV PSKT + P
Sbjct: 89 IRVMPSKTAIVP 100
>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
Length = 219
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/141 (69%), Positives = 120/141 (85%), Gaps = 3/141 (2%)
Query: 89 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 148
+VTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YP+
Sbjct: 39 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPIN 98
Query: 149 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR- 207
VL SKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGE++ R
Sbjct: 99 VLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGELKVCRN 158
Query: 208 --LLGDYQHSTRIAFVEFAMA 226
+ D + + + F++F +
Sbjct: 159 GTIKIDLETNKIMDFIKFDVG 179
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 166 RSEDEREMCSRTIYCTN--IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 223
+SE + ++ ++Y + +VT+ ++ F + CG+V R+ GD R AF+EF
Sbjct: 17 KSETDVDVDYNSLYSKQDFLQGEVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEF 75
Query: 224 AMAESAIAALNCSGAVLGSLPIRVSPSKTPVRP 256
E A AALN SG VLG PI V SKT + P
Sbjct: 76 TDEEGARAALNLSGTVLGYYPINVLLSKTAIAP 108
>gi|413952071|gb|AFW84720.1| hypothetical protein ZEAMMB73_482719 [Zea mays]
Length = 625
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/115 (80%), Positives = 106/115 (92%)
Query: 88 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 147
QVTEE LA LF+ GQVVDC +CGDPNSVL+FAF+EFTDEEGAR AL+L+GT+L +YPV
Sbjct: 308 HQVTEENLAALFINYGQVVDCHMCGDPNSVLQFAFIEFTDEEGARVALNLSGTVLRYYPV 367
Query: 148 RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 202
RVLPSKTAIAPVNPTF+PRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGE
Sbjct: 368 RVLPSKTAIAPVNPTFVPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 422
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLP 244
+VT+ ++ F + G+V + GD + AF+EF E A ALN SG VL P
Sbjct: 308 HQVTEENLAALFINY-GQVVDCHMCGDPNSVLQFAFIEFTDEEGARVALNLSGTVLRYYP 366
Query: 245 IRVSPSKTPVRPRAP 259
+RV PSKT + P P
Sbjct: 367 VRVLPSKTAIAPVNP 381
>gi|413943210|gb|AFW75859.1| putative ubiquitin-conjugating enzyme family [Zea mays]
Length = 699
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 106/137 (77%), Gaps = 20/137 (14%)
Query: 89 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 148
QVTEE LA LF+ CGQVVDCR+CGDPNSVLRF F+EFTDEEGARAAL+L+GT+L +YPV
Sbjct: 486 QVTEENLAALFINCGQVVDCRMCGDPNSVLRFTFIEFTDEEGARAALNLSGTVLRYYPVS 545
Query: 149 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 208
VLPSKT IAPVNPTFLPR VTQ D+KLFFES+CGEV RLRL
Sbjct: 546 VLPSKTVIAPVNPTFLPR--------------------VTQADLKLFFESICGEVFRLRL 585
Query: 209 LGDYQHSTRIAFVEFAM 225
LGDY HSTRIAFVEF M
Sbjct: 586 LGDYHHSTRIAFVEFVM 602
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 245
+VT+ ++ F + CG+V R+ GD R F+EF E A AALN SG VL P+
Sbjct: 486 QVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFTFIEFTDEEGARAALNLSGTVLRYYPV 544
Query: 246 RVSPSKTPVRPRAP 259
V PSKT + P P
Sbjct: 545 SVLPSKTVIAPVNP 558
>gi|414884994|tpg|DAA61008.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 295
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 126/191 (65%), Gaps = 2/191 (1%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVE 124
++ +Q DE ++RT++V ID VTE+ LA LF G VVDCRICGDP S LRF FVE
Sbjct: 96 KSHRSQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTVVDCRICGDPTSDDGLRFGFVE 155
Query: 125 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
E+ A A+L L G ++ P+ V S+TAI P+NP FLP+SE E E C RTIYCTNI
Sbjct: 156 LQHEDEAIASLDLDGYIISVSPLSVSRSRTAICPINPKFLPQSEAEWETCLRTIYCTNIS 215
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLP 244
K VT +++ F E+ G+V R+RLL + + ST IAF+EF AIAAL G + +P
Sbjct: 216 KNVTSSNLRSFCEAYFGKVCRVRLLDNKERSTNIAFIEFVEVYGAIAALGSGGIYVDGVP 275
Query: 245 IRVSPSKTPVR 255
IR+ PSK+P+R
Sbjct: 276 IRMCPSKSPIR 286
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 161 PTFLPRSEDE-REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTR 217
PTF + E RTI+ ID VT+ + F+ + G V R+ GD R
Sbjct: 92 PTFFKSHRSQWDETVKRTIFVKYIDHNVTEDILACLFQ-LFGTVVDCRICGDPTSDDGLR 150
Query: 218 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
FVE + AIA+L+ G ++ P+ VS S+T + P P+
Sbjct: 151 FGFVELQHEDEAIASLDLDGYIISVSPLSVSRSRTAICPINPK 193
>gi|414884567|tpg|DAA60581.1| TPA: hypothetical protein ZEAMMB73_957971 [Zea mays]
Length = 296
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 93/104 (89%)
Query: 104 QVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTF 163
VVDCR+CGDPNSVLRFAF+EF DEEGARAA +L+ T+LG+YPV VLPSKTAIAPVN TF
Sbjct: 131 HVVDCRMCGDPNSVLRFAFIEFADEEGARAAPNLSRTVLGYYPVNVLPSKTAIAPVNETF 190
Query: 164 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR 207
LPRS+DEREMC+ TIYCTNIDKKVTQ D+ LFFES+CGE++ R
Sbjct: 191 LPRSDDEREMCASTIYCTNIDKKVTQADLNLFFESICGELKVCR 234
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 33/63 (52%)
Query: 194 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP 253
+F + V R+ GD R AF+EFA E A AA N S VLG P+ V PSKT
Sbjct: 123 VFHLHISPHVVDCRMCGDPNSVLRFAFIEFADEEGARAAPNLSRTVLGYYPVNVLPSKTA 182
Query: 254 VRP 256
+ P
Sbjct: 183 IAP 185
>gi|413922754|gb|AFW62686.1| hypothetical protein ZEAMMB73_396388 [Zea mays]
Length = 279
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 105/147 (71%), Gaps = 13/147 (8%)
Query: 90 VTEEQLATLFLTCGQVVDCRICGDPNSVLR----------FAFVEFTDEEGARAALSLAG 139
VTEE L LF+ CGQVVDC +CGDPN VL + EGARAAL+L+G
Sbjct: 90 VTEENLVALFINCGQVVDCHMCGDPNLVLSLLTLCNGSTIYGVKNIDVPEGARAALNLSG 149
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
T+LG+YPV VLPSKTAIAPVN TFLPRS DE EMC+RTIYCTNIDKKVTQ D+KLFFES+
Sbjct: 150 TVLGYYPVNVLPSKTAIAPVNETFLPRSNDEHEMCARTIYCTNIDKKVTQADLKLFFESI 209
Query: 200 CGEVQRLR---LLGDYQHSTRIAFVEF 223
CGE++ R + D + + + F++F
Sbjct: 210 CGELKVCRNGTIKIDLETNKIMDFIKF 236
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGD----------YQHSTRIAFVEFAMAESAIAALNCS 236
VT+ ++ F + CG+V + GD ST + E A AALN S
Sbjct: 90 VTEENLVALFIN-CGQVVDCHMCGDPNLVLSLLTLCNGSTIYGVKNIDVPEGARAALNLS 148
Query: 237 GAVLGSLPIRVSPSKTPVRP 256
G VLG P+ V PSKT + P
Sbjct: 149 GTVLGYYPVNVLPSKTAIAP 168
>gi|50726388|dbj|BAD33999.1| RNA-binding protein-like [Oryza sativa Japonica Group]
Length = 316
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 120/197 (60%), Gaps = 22/197 (11%)
Query: 54 RNGYSQGKRR-MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRIC 111
RN QG+ + R AQ++E +RRT++VSDID VTE+ LA LF + C VVDCRIC
Sbjct: 134 RNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRIC 193
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
GD +S LRFAF+EF DE A AAL L G +LG P+RV PSKTAI PVNP+FLP
Sbjct: 194 GDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNPSFLP------ 247
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
+V D+K F E G+V RL+LLGD H TRIAF+EFA + AI
Sbjct: 248 --------------QVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEVDGAIN 293
Query: 232 ALNCSGAVLGSLPIRVS 248
ALN SG PIR +
Sbjct: 294 ALNSSGIFASGQPIRFN 310
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
A AAL+ G VLG P+RVSPSKT + P P
Sbjct: 210 ESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNP 243
>gi|290985874|ref|XP_002675650.1| predicted protein [Naegleria gruberi]
gi|284089247|gb|EFC42906.1| predicted protein [Naegleria gruberi]
Length = 422
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 120/192 (62%), Gaps = 11/192 (5%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
A++D+ I+RT+YV+ ID Q+ E Q+ F CG++V+ R+CGD RFAF EF +E
Sbjct: 80 AEEDDKIKRTIYVTSIDTQILEAQVCEFFSYCGRIVNYRVCGDTQHPTRFAFFEFEQKES 139
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNP--------TFLPRSEDEREMCSRTIYCTN 182
A+AA+SL+G LG Y +R+L S+T I P +F P D+ +RT+Y N
Sbjct: 140 AQAAVSLSGQFLGRYALRILGSRTPIQPTPGAVGNGAVYSFTPAHHDQ---INRTVYVGN 196
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGS 242
D +T+ D+K FF++ CG V ++ L GD HS R AFVEF ES AL CSG +LG+
Sbjct: 197 ADISLTEDDLKEFFDANCGPVTKVVLAGDAVHSARFAFVEFLHMESRNKALECSGTLLGN 256
Query: 243 LPIRVSPSKTPV 254
IR++PS+TP+
Sbjct: 257 RNIRINPSRTPI 268
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 24/161 (14%)
Query: 119 RFAFVEFTDEEGARAALSLAGT-MLGFY------------PVRVLPSKTAIAPVNPT--- 162
++AFVEF+ E A+ A+ L+GT +LG + P V + T I+P +
Sbjct: 8 KYAFVEFSSSEEAKVAIELSGTEILGKHLKISLSRSPISNPTPVQSNPTQISPTDDNATK 67
Query: 163 --FLPRSE-----DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 215
FL SE +E + RTIY T+ID ++ + + FF S CG + R+ GD QH
Sbjct: 68 YQFLSESELKRKAEEDDKIKRTIYVTSIDTQILEAQVCEFF-SYCGRIVNYRVCGDTQHP 126
Query: 216 TRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRP 256
TR AF EF ESA AA++ SG LG +R+ S+TP++P
Sbjct: 127 TRFAFFEFEQKESAQAAVSLSGQFLGRYALRILGSRTPIQP 167
>gi|242044320|ref|XP_002460031.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
gi|241923408|gb|EER96552.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
Length = 288
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 118/190 (62%), Gaps = 17/190 (8%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEF 125
++ +Q DE ++RT++V ID VTEE LA +F G VVDCRICG P S LRF FVE
Sbjct: 94 KSHRSQWDETVKRTIFVKYIDHTVTEETLACMFRLFGTVVDCRICGHPTSGGLRFGFVEL 153
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
E+ A A+L L G+++G V V S+TAI P+NP FLP+SE E E C RTIYCT+I K
Sbjct: 154 RHEDEALASLDLDGSIIGISAVSVSRSRTAICPINPKFLPQSEAEWETCLRTIYCTSISK 213
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 245
V RL+LL + + ST IAF+EFA + AIAAL G + +PI
Sbjct: 214 IVC----------------RLKLLDNGERSTNIAFIEFAEVDGAIAALMSGGIYVDGIPI 257
Query: 246 RVSPSKTPVR 255
R+ PSK+P+R
Sbjct: 258 RMCPSKSPIR 267
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 153 KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD- 211
+ A +P N F E RTI+ ID VT+ + F + G V R+ G
Sbjct: 83 QDANSPRNAFFKSHRSQWDETVKRTIFVKYIDHTVTEETLACMFR-LFGTVVDCRICGHP 141
Query: 212 YQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
R FVE + A+A+L+ G+++G + VS S+T + P P+
Sbjct: 142 TSGGLRFGFVELRHEDEALASLDLDGSIIGISAVSVSRSRTAICPINPK 190
>gi|414878000|tpg|DAA55131.1| TPA: hypothetical protein ZEAMMB73_948686 [Zea mays]
Length = 237
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 95/134 (70%), Gaps = 27/134 (20%)
Query: 90 VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV 149
VTEE LATLF+ CGQVVDCR+ GDPNSVLRFAFVEFTDEEGARAAL+L+GT LG+YPV V
Sbjct: 88 VTEENLATLFINCGQVVDCRMRGDPNSVLRFAFVEFTDEEGARAALNLSGTELGYYPVNV 147
Query: 150 LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL 209
LPSKTAIAPVN TFLPR VTQ D+KLFFES+CGE+
Sbjct: 148 LPSKTAIAPVNETFLPR--------------------VTQADLKLFFESICGEI------ 181
Query: 210 GDYQHSTRIAFVEF 223
D + + + F++F
Sbjct: 182 -DLETNKIMDFIKF 194
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 246
VT+ ++ F + CG+V R+ GD R AFVEF E A AALN SG LG P+
Sbjct: 88 VTEENLATLFIN-CGQVVDCRMRGDPNSVLRFAFVEFTDEEGARAALNLSGTELGYYPVN 146
Query: 247 VSPSKTPVRP 256
V PSKT + P
Sbjct: 147 VLPSKTAIAP 156
>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
Length = 249
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 109/179 (60%), Gaps = 41/179 (22%)
Query: 90 VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV 149
VTEE LA LF+ C QVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+ T+LG+YPV V
Sbjct: 32 VTEENLAALFINCRQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSRTVLGYYPVNV 91
Query: 150 LPSKTAIAPVNPTFLPR-----------------SEDEREMCSRTI-------------Y 179
LPSKTAIAPVN TFLPR +M S+ +
Sbjct: 92 LPSKTAIAPVNKTFLPRVCKPFGTNMLVLSSWLNVHALYDMVSKKVGRFSVLYSLTMNMK 151
Query: 180 CT--------NIDKKVTQGDIKLFFESVCGEVQRLR---LLGDYQHSTRIAFVEFAMAE 227
C NIDKKVTQ D+KLFFES+CGE++ R + D + + + F++F +
Sbjct: 152 CVQGLSTAQINIDKKVTQADLKLFFESICGELKVCRNGTIKIDLETNKIMDFIKFDVGN 210
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 246
VT+ ++ F + C +V R+ GD R AF+EF E A AALN S VLG P+
Sbjct: 32 VTEENLAALFIN-CRQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSRTVLGYYPVN 90
Query: 247 VSPSKTPVRP 256
V PSKT + P
Sbjct: 91 VLPSKTAIAP 100
>gi|357153308|ref|XP_003576409.1| PREDICTED: uncharacterized protein LOC100831764 [Brachypodium
distachyon]
Length = 294
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 104/179 (58%), Gaps = 20/179 (11%)
Query: 88 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE------------------- 128
+ TE+ LA F CG VVDCRIC +P S FAF+EF
Sbjct: 90 RNATEKDLADRFRQCGAVVDCRICRNPRSEFLFAFIEFQYHANFEFHVKQNIKKQMLHPI 149
Query: 129 -EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 187
+ A AAL L G +G V+V PS+TAI VNP+FL +S+ E+EMCSRT+YCTNI+K V
Sbjct: 150 SDDASAALHLKGVTIGDRHVKVAPSRTAIMHVNPSFLAQSDGEKEMCSRTVYCTNIEKSV 209
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 246
T ++ FF++ G V R+RLLGD H T IAFVEFA + IAAL G LPIR
Sbjct: 210 TCAELVGFFQAYFGSVSRVRLLGDDNHVTGIAFVEFAEVSADIAALRSIGIYARGLPIR 268
>gi|414884993|tpg|DAA61007.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 317
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 116/219 (52%), Gaps = 46/219 (21%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ---------------------- 104
++ +Q DE ++RT++V ID VTE+ LA LF G
Sbjct: 106 KSHRSQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTSYIVWDRKVNAYISTRWCIFFY 165
Query: 105 ------VVDCRICGDPNS--VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 156
VVDCRICGDP S LRF FVE E+ A A+L L G ++ P+ V S+TAI
Sbjct: 166 ITNRYTVVDCRICGDPTSDDGLRFGFVELQHEDEAIASLDLDGYIISVSPLSVSRSRTAI 225
Query: 157 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 216
P+NP FLP+SE E E C RTIYCTNI K V R+RLL + + ST
Sbjct: 226 CPINPKFLPQSEAEWETCLRTIYCTNISKNVC----------------RVRLLDNKERST 269
Query: 217 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
IAF+EF AIAAL G + +PIR+ PSK+P+R
Sbjct: 270 NIAFIEFVEVYGAIAALGSGGIYVDGVPIRMCPSKSPIR 308
>gi|303278248|ref|XP_003058417.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459577|gb|EEH56872.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 187
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 106/176 (60%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 139
V+VS++ V+E LA +F CG+V+DCR CGD +FAFV F AL+L G
Sbjct: 12 NVHVSNVSLSVSESALARVFAGCGRVLDCRTCGDCGDKKKFAFVAFETSHEVDQALTLDG 71
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
++ +RV SKTA+ PVNP LP SE + E C RT+Y +NID + D+K FE+
Sbjct: 72 FVVDGRAIRVTRSKTAVIPVNPGLLPTSEADVERCGRTVYVSNIDPTTSDDDLKRAFEAN 131
Query: 200 CGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
G ++R L + R AF+EF A SA++AL SG V+G+ +RV PSKTP++
Sbjct: 132 AGAIRRAHALSSSRRDARNAFIEFENASSAVSALGMSGRVIGARKVRVVPSKTPLK 187
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 236
++ +N+ V++ + F CG V R GD + AFV F + AL
Sbjct: 12 NVHVSNVSLSVSESALARVFAG-CGRVLDCRTCGDCGDKKKFAFVAFETSHEVDQALTLD 70
Query: 237 GAVLGSLPIRVSPSKTPVRPRAP 259
G V+ IRV+ SKT V P P
Sbjct: 71 GFVVDGRAIRVTRSKTAVIPVNP 93
>gi|145353373|ref|XP_001420989.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357398|ref|XP_001422906.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581225|gb|ABO99282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583150|gb|ABP01265.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 183
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 104/177 (58%), Gaps = 1/177 (0%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGARAALSLA 138
TV+V D+ V+E +LA +F +CG+++DCR+CGD N+ +AFV F E AL L
Sbjct: 7 TVFVKDVPASVSERELADVFASCGRIIDCRMCGDANTHKFSYAFVAFECAEAVDRALLLD 66
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
T L + V S TA+ PVNP LP++E E E C+RTIY N+DK V +KL FE
Sbjct: 67 KTPLHGKNIMVKKSDTAVIPVNPLLLPQNEREVESCARTIYVANVDKTVDSHALKLLFED 126
Query: 199 VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
G V RL L +AFVEF ES AL+ +G LG+ IRVS SKTP+R
Sbjct: 127 RAGPVNRLHLQVKNNAVANVAFVEFVDLESVGTALHLTGEQLGNRMIRVSASKTPLR 183
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 128
N ++ E RT+YV+++D+ V L LF G V + N+V AFVEF D
Sbjct: 95 NEREVESCARTIYVANVDKTVDSHALKLLFEDRAGPVNRLHLQVKNNAVANVAFVEFVDL 154
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKT 154
E AL L G LG +RV SKT
Sbjct: 155 ESVGTALHLTGEQLGNRMIRVSASKT 180
>gi|238008810|gb|ACR35440.1| unknown [Zea mays]
Length = 92
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 72/88 (81%)
Query: 173 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 232
M RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF AE AI A
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAIMA 60
Query: 233 LNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
LNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 61 LNCSGMILGTLPVRVSPSKTPVKPRVNR 88
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 76 VIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
++ RTVY ++ID+ VT+ + F CG+V R+ GD R AFVEF EGA A
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAIMA 60
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAP 158
L+ +G +LG PVRV PSKT + P
Sbjct: 61 LNCSGMILGTLPVRVSPSKTPVKP 84
>gi|413926011|gb|AFW65943.1| hypothetical protein ZEAMMB73_108884 [Zea mays]
Length = 92
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 74/88 (84%)
Query: 173 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 232
M SRT+YCTNIDKKVT+ D+K FF+ CG+V RLRLL D HST IAFVEFA AESAI A
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMA 60
Query: 233 LNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
LN SG VLGSLPIRVSPSKTPVRPR+PR
Sbjct: 61 LNFSGMVLGSLPIRVSPSKTPVRPRSPR 88
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 76 VIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
++ RTVY ++ID++VTEE + F CG+V R+ D AFVEF E A A
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMA 60
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAPVNP 161
L+ +G +LG P+RV PSKT + P +P
Sbjct: 61 LNFSGMVLGSLPIRVSPSKTPVRPRSP 87
>gi|308810827|ref|XP_003082722.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116061191|emb|CAL56579.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 650
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 111/205 (54%), Gaps = 4/205 (1%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIR---RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
+G G+ + R S + + R TV+V +I V+E +LA F CG++VDCR+C
Sbjct: 168 DGSGGGRHTYHGRHSVSDERAGGRGSPNTVFVKEIPASVSERELAETFAACGRIVDCRMC 227
Query: 112 GDPNS-VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
D NS +AFV F + + ALSL L + V S TA+ PVNP LP++E E
Sbjct: 228 RDANSNKFSYAFVAFETADEVQNALSLDKMSLHGKNIVVRRSDTAVIPVNPLLLPQNEAE 287
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 230
E +RTIY N+DK V +K FFE G V RL L +AFVEF ESA
Sbjct: 288 LESTARTIYVANVDKSVDSDALKTFFERHAGAVNRLHLQVKNAADANVAFVEFVNLESAA 347
Query: 231 AALNCSGAVLGSLPIRVSPSKTPVR 255
++L +G LG +RVS SKTP+R
Sbjct: 348 SSLRLTGKQLGQRVVRVSASKTPLR 372
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD-----CRICGDPNSVLRFAFVE 124
N + E RT+YV+++D+ V + L T F V+ + D N AFVE
Sbjct: 284 NEAELESTARTIYVANVDKSVDSDALKTFFERHAGAVNRLHLQVKNAADAN----VAFVE 339
Query: 125 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM----------- 173
F + E A ++L L G LG VRV SKT + VN R ++R M
Sbjct: 340 FVNLESAASSLRLTGKQLGQRVVRVSASKTPLR-VNR----RMSEQRAMSYYASGTNGDA 394
Query: 174 ----CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 229
+Y +NI K ++ G ++ F S CG V + LL + + AFVEF AESA
Sbjct: 395 ATPPAPTKVYISNIPKNLSPGTLRAMF-SECGRVTNVELLNNPKSKFPYAFVEFDDAESA 453
Query: 230 IAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALN G + I + + R APR
Sbjct: 454 KRALNFRGREVQGCAINIELTYNKKRRGAPR 484
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG- 139
VY+S+I + ++ L +F CG+V + + +P S +AFVEF D E A+ AL+ G
Sbjct: 403 VYISNIPKNLSPGTLRAMFSECGRVTNVELLNNPKSKFPYAFVEFDDAESAKRALNFRGR 462
Query: 140 --------TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
L + R + A+ PV S D+ E RT++ T+ID +
Sbjct: 463 EVQGCAINIELTYNKKRRGAPRLALDPV-------SVDKME---RTVFVTDIDPDLEPSF 512
Query: 192 IKLFFESVCGEVQ----RLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLG-SLPIR 246
++ FE CG V + G+ Q I F E + E A+ C LG S I+
Sbjct: 513 VRSKFEDECGPVTLFWYKAFEKGEKQALAYIEFTELSSVEKALD--QCRTHFLGESRLIK 570
Query: 247 VSPSKTPVRPR 257
V S TP+ P+
Sbjct: 571 VRHSHTPLVPK 581
>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
Length = 266
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 105/183 (57%), Gaps = 26/183 (14%)
Query: 90 VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV 149
VTEE LATLF+ CGQVV+CR+CGDPNSVLRFAF+EFTDE F P
Sbjct: 93 VTEENLATLFINCGQVVECRMCGDPNSVLRFAFIEFTDEVNET-----------FLPRVC 141
Query: 150 LPSKTAIAPVNP-----TFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 204
PS T + ++ S+DEREMC+RTIY TNIDKKVTQ D+KLFFES+CGE++
Sbjct: 142 KPSGTNMLVLSSWLNVHALSDMSDDEREMCARTIYYTNIDKKVTQADLKLFFESICGELK 201
Query: 205 RLR---LLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRP 261
R + D + + + F++F + + + +G G +RV K + +
Sbjct: 202 VCRNGTIKIDLETNKIMDFIKFDVGNAVMV----TG---GRNTVRVGVIKNMEKHKGSFE 254
Query: 262 PLH 264
+H
Sbjct: 255 TIH 257
>gi|414585783|tpg|DAA36354.1| TPA: hypothetical protein ZEAMMB73_057809 [Zea mays]
Length = 217
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 71/85 (83%)
Query: 120 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
FAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTA+ PVNP FLPR++DE+EM RT+Y
Sbjct: 60 FAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAMLPVNPKFLPRTDDEKEMVMRTVY 119
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQ 204
TNIDK VTQ D+ FFE +CGE Q
Sbjct: 120 RTNIDKMVTQLDVNKFFEELCGERQ 144
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 218 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
AF+EF+ E A ALN G + G P+RV PSKT + P P+
Sbjct: 60 FAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAMLPVNPK 102
>gi|227204205|dbj|BAH56954.1| AT4G10610 [Arabidopsis thaliana]
Length = 206
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 48 NTAFQKRNGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 106
+ +F+++ + Q GKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEEQLA LF+ GQVV
Sbjct: 118 DGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVV 177
Query: 107 DCRICGDPNSVLRFAFVEFTDE 128
DCRICGDPNSVLRFAF+EFTDE
Sbjct: 178 DCRICGDPNSVLRFAFIEFTDE 199
>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
Length = 271
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 7/106 (6%)
Query: 54 RNGYSQGKRRMNCRTSNA------QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
+N Y+ G+R ++C QD ++ ++ I VTEE L TLF+ CGQVVD
Sbjct: 61 KNVYNAGQRGISCLGLGVSDRYLDDQDHILSLVFHLH-ISPHVTEENLTTLFINCGQVVD 119
Query: 108 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK 153
CR+CGDPNSVLRFAF+EF DEEGARAAL+L+GT+LG+YPV VLPSK
Sbjct: 120 CRMCGDPNSVLRFAFIEFADEEGARAALNLSGTVLGYYPVNVLPSK 165
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
R D+++ ++ +I VT+ ++ F + CG+V R+ GD R AF+EFA
Sbjct: 81 RYLDDQDHILSLVFHLHISPHVTEENLTTLFIN-CGQVVDCRMCGDPNSVLRFAFIEFAD 139
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
E A AALN SG VLG P+ V PSK P+
Sbjct: 140 EEGARAALNLSGTVLGYYPVNVLPSKLPLH 169
>gi|440801206|gb|ELR22227.1| RNAbinding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 533
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 36/203 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD-PNSVLRFAFVEFTDEEGARAALSLA 138
TVYV+ +D Q+ EE + LF CG V + R+CG+ N RFAFVEF+ E A A+ L
Sbjct: 164 TVYVTGVDTQLREEHVIQLFSLCGTVTNIRMCGETENKATRFAFVEFSTRESALMAMGLT 223
Query: 139 GTMLGFYPVRVLPSKTAIAP--------------------------VNPTFLPRSEDERE 172
+LG P++V+PSKTAI +PT+ +E
Sbjct: 224 NIVLGNAPIKVMPSKTAIQAGSRGGGGGPGGGGGPRPPHHAHAAAAFDPTY-------QE 276
Query: 173 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIA 231
SRT+Y +D +++ ++ F S G V +L + GD H R AFVEF+ A
Sbjct: 277 RASRTLYVGGVDSNLSEAELLQMF-SGFGTVTKLAMAGDTTVHQARFAFVEFSTVAEAHM 335
Query: 232 ALNCSGAVLGSLPIRVSPSKTPV 254
AL +G V+G PIRVS SKTP+
Sbjct: 336 ALAMNGTVVGERPIRVSQSKTPI 358
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 58/233 (24%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 137
+RTVYV I + E L F TC ++ R+ GDP+ RF F+EF EGA+ A ++
Sbjct: 13 QRTVYVGCIPSNLNSETLGHFFSTCDTIIQIRLAGDPSYSTRFGFIEFATPEGAQRACNM 72
Query: 138 AGTMLGFYPVRVLPSKTAI----------------------------------------- 156
G L +R+ SKTAI
Sbjct: 73 NGVELDGKKLRITLSKTAISSTSSHSGHSAHSAQSDASSAYASAAAGHMGLHAYGAAYGM 132
Query: 157 ------------APVNPTFLP-RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 203
A + P + P ++R C T+Y T +D ++ + + F S+CG V
Sbjct: 133 GYGAQGGMPYMHAGMPPAYAPAHGSNDRVAC--TVYVTGVDTQLREEHVIQLF-SLCGTV 189
Query: 204 QRLRLLGDYQH-STRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
+R+ G+ ++ +TR AFVEF+ ESA+ A+ + VLG+ PI+V PSKT ++
Sbjct: 190 TNIRMCGETENKATRFAFVEFSTRESALMAMGLTNIVLGNAPIKVMPSKTAIQ 242
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGARA 133
E RT+YV +D ++E +L +F G V + GD RFAFVEF+ A
Sbjct: 276 ERASRTLYVGGVDSNLSEAELLQMFSGFGTVTKLAMAGDTTVHQARFAFVEFSTVAEAHM 335
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPT 162
AL++ GT++G P+RV SKT I T
Sbjct: 336 ALAMNGTVVGERPIRVSQSKTPINAAKST 364
>gi|294460213|gb|ADE75689.1| unknown [Picea sitchensis]
Length = 79
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 2/77 (2%)
Query: 141 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 200
MLG+YPVRVLPSKTAIAPVNPTFLPR+E+EREMC+RTIYCTNIDKKV+Q D+K FFE++C
Sbjct: 1 MLGYYPVRVLPSKTAIAPVNPTFLPRTEEEREMCARTIYCTNIDKKVSQSDLKAFFETLC 60
Query: 201 GEVQRL--RLLGDYQHS 215
G + RL Y HS
Sbjct: 61 GFSLEIAWRLSSFYSHS 77
>gi|413921446|gb|AFW61378.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 206
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 57/64 (89%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 124
N RTS AQ+DE IRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+E
Sbjct: 142 NSRTSMAQRDEAIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIE 201
Query: 125 FTDE 128
FTDE
Sbjct: 202 FTDE 205
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 223
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEF 202
>gi|413944598|gb|AFW77247.1| hypothetical protein ZEAMMB73_128485 [Zea mays]
Length = 331
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 63/75 (84%)
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
+GAR AL+L GT+ GFYPVRVLPSKTAI PVNP FLPR++DE+EM RT+Y TNIDK VT
Sbjct: 135 KGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFLPRTDDEKEMVMRTVYRTNIDKMVT 194
Query: 189 QGDIKLFFESVCGEV 203
Q D+K FFE +CGE+
Sbjct: 195 QLDVKKFFEELCGEL 209
>gi|224132620|ref|XP_002321367.1| predicted protein [Populus trichocarpa]
gi|222868363|gb|EEF05494.1| predicted protein [Populus trichocarpa]
Length = 74
Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/59 (84%), Positives = 55/59 (93%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
SEDERE+C+RTIYCTNIDKK+TQ D+KLFFES CGEV RLRLLGDY HSTRIAFVEFA+
Sbjct: 2 SEDEREICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAV 60
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEF 125
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 5 EREICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEF 58
>gi|413954118|gb|AFW86767.1| hypothetical protein ZEAMMB73_327506, partial [Zea mays]
Length = 81
Score = 110 bits (274), Expect = 8e-22, Method: Composition-based stats.
Identities = 49/59 (83%), Positives = 56/59 (94%)
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 187
EGARAAL+L+GT+LG+YP+ VL SKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKV
Sbjct: 14 EGARAALNLSGTVLGYYPINVLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKV 72
>gi|290997908|ref|XP_002681523.1| predicted protein [Naegleria gruberi]
gi|284095147|gb|EFC48779.1| predicted protein [Naegleria gruberi]
Length = 408
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 109/193 (56%), Gaps = 14/193 (7%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD------PNSVL--RFAFVEF 125
+ RT+++S ID +E++L F G + + R+C + N+ L +FAF+E+
Sbjct: 200 NSAASRTIHISGIDSSFSEDELLDYFSVYGDITNYRLCNNDQQSSNSNTQLQTKFAFIEY 259
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRSEDEREMCSRTIYCTNID 184
E + A+ + G++ G ++V SKTAI P + + + R++ RTI+ ID
Sbjct: 260 ATTEQSLKAIMVNGSLWGKSKLKVSHSKTAIQTPPKKSLIDK--QYRDLVERTIHVGGID 317
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSG-AVLGS 242
K++Q +K FFE +CG + R+ + GD + + TR F+EF +S + AL SG + GS
Sbjct: 318 VKLSQDHVKAFFEELCGAIHRIAMAGDTESYETRFCFIEFEDKQSTLRALRLSGCTIAGS 377
Query: 243 LP-IRVSPSKTPV 254
+ I+VSPSK+P+
Sbjct: 378 VKQIKVSPSKSPI 390
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 138
RT+++ +I T E L LF GQV + ++ GDP+ RFAFVEF D A+ +LSL
Sbjct: 33 RTIHIGNISSYTTVESLQLLFSKYGQVTNIKLAGDPSYAKRFAFVEFVDHHQAKLSLSLD 92
Query: 139 GT 140
GT
Sbjct: 93 GT 94
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS--------TRIAF 220
D SRTI+ + ID ++ ++ +F SV G++ RL + Q S T+ AF
Sbjct: 198 DANSAASRTIHISGIDSSFSEDELLDYF-SVYGDITNYRLCNNDQQSSNSNTQLQTKFAF 256
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
+E+A E ++ A+ +G++ G ++VS SKT ++
Sbjct: 257 IEYATTEQSLKAIMVNGSLWGKSKLKVSHSKTAIQ 291
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
SRTI+ NI T ++L F S G+V ++L GD ++ R AFVEF A +L
Sbjct: 31 TSRTIHIGNISSYTTVESLQLLF-SKYGQVTNIKLAGDPSYAKRFAFVEFVDHHQAKLSL 89
Query: 234 NCSGAVLGSLPIRVSPSK 251
+ G +++S +K
Sbjct: 90 SLDGTEFMGQNLKISMAK 107
>gi|255079476|ref|XP_002503318.1| predicted protein [Micromonas sp. RCC299]
gi|226518584|gb|ACO64576.1| predicted protein [Micromonas sp. RCC299]
Length = 144
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 15/144 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--------------NSVLRFAFVEF 125
TVYV +I +E + F TCG V +CR+ DP N R AFV F
Sbjct: 1 TVYVREIPAGASEADVHDHFYTCGAVRECRVSADPHPPSKTDAGAGPDTNKKTRVAFVAF 60
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
E R AL++ G++L P++V+PS+T + PVNP LPR+E+ERE C+RT+Y +N+D
Sbjct: 61 ETENAVREALTMDGSLLLGEPIQVMPSRTEVMPVNPGLLPRTEEERERCARTVYVSNVDP 120
Query: 186 KVTQGDIKLFFESVC-GEVQRLRL 208
V +++ E++ G++ L L
Sbjct: 121 DVRSNELRSALEAIADGKIAALHL 144
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--------------YQHSTRIAFVE 222
T+Y I ++ D+ F + CG V+ R+ D TR+AFV
Sbjct: 1 TVYVREIPAGASEADVHDHFYT-CGAVRECRVSADPHPPSKTDAGAGPDTNKKTRVAFVA 59
Query: 223 FAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
F + AL G++L PI+V PS+T V P P
Sbjct: 60 FETENAVREALTMDGSLLLGEPIQVMPSRTEVMPVNP 96
>gi|384249045|gb|EIE22527.1| hypothetical protein COCSUDRAFT_66269 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 13/178 (7%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 138
RT+YV ++ ++V E L LF CG V RI GDP+ R+AF+EFT E ++ A+ L
Sbjct: 6 RTIYVGNVGKEVDENALMALFGHCGTVTQIRIAGDPSYDTRYAFIEFTTPEESQTAMMLD 65
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID-KKVTQGDIKLFFE 197
G M+ +RV ++ P + RS D + RTI+ + ++++ I +F
Sbjct: 66 GMMVFERQIRVNMARGGSGP----GVVRSNDP-DRVQRTIHIGGLPFDELSEESISDYFS 120
Query: 198 SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
++ GEV +R G R A+VEF ++A A++ G LGS ++VS SKTP+
Sbjct: 121 NI-GEVNAVRKSG------RFAWVEFNTLQAAQTAMSLDGESLGSGTMKVSASKTPIH 171
>gi|440795967|gb|ELR17076.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 347
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 42/216 (19%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 139
TV V++I TE+ L F CG +V + GD + ++AFV F A AAL+L+
Sbjct: 39 TVIVTNISPLATEQDLRDFFANCGNIVQINLLGDGLGISQYAFVRFETMAQANAALTLST 98
Query: 140 TMLGFYPVRV-----------------------------------------LPSKTAIAP 158
+ PV++ +P A+
Sbjct: 99 GAVAGMPVKIVMAASDIPVGGAAAAATAALPTPLALTPGVGAASGLGLLGAIPHSLALLS 158
Query: 159 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI 218
+P ++++ +RTIY N++ +T + FF ++CG + RL GD H +R
Sbjct: 159 GSPANAQSYHEKQDEIARTIYVGNVNSTITSEQLMQFF-AICGPITFCRLAGDESHPSRF 217
Query: 219 AFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
AF+EFA E+A AA+ +G +L ++V+ SK P+
Sbjct: 218 AFIEFATKEAAQAAMMLNGTMLLDRAVKVNHSKNPI 253
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 124
N ++ + +QDE I RT+YV +++ +T EQL F CG + CR+ GD + RFAF+E
Sbjct: 163 NAQSYHEKQDE-IARTIYVGNVNSTITSEQLMQFFAICGPITFCRLAGDESHPSRFAFIE 221
Query: 125 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
F +E A+AA+ L GTML V+V SK I P + ++DE+
Sbjct: 222 FATKEAAQAAMMLNGTMLLDRAVKVNHSKNPIVKP-PKTVDNAKDEQ 267
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 151 PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG 210
P + PV P F T+ TNI T+ D++ FF + CG + ++ LLG
Sbjct: 23 PGSDGLLPVPPQF----------SVSTVIVTNISPLATEQDLRDFFAN-CGNIVQINLLG 71
Query: 211 DYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
D ++ AFV F A AAL S + +P+++
Sbjct: 72 DGLGISQYAFVRFETMAQANAALTLSTGAVAGMPVKI 108
>gi|328769388|gb|EGF79432.1| hypothetical protein BATDEDRAFT_35374 [Batrachochytrium
dendrobatidis JAM81]
Length = 555
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 34/204 (16%)
Query: 85 DIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTML 142
++ +Q+TEE L F G +V + C + N +++ + V+F D E A AL L GT+L
Sbjct: 22 NLSKQITEELLCQFFSFIGPIVSISLQPC-EANPLVQESLVQFQDSEDAALALHLTGTVL 80
Query: 143 GFYPVRVLPSKTAIA-----------PVNPT--------------FLPRSEDE----REM 173
+ + P I P NPT +P + ++
Sbjct: 81 ADKALFITPPSAKIQSFNSHGYLNIPPPNPTAPGVLVPGSMAGSTIVPYGQTATIAGQDS 140
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
RTIY NI ++Q ++ + F S CG+V ++++ GD HSTR AF+EFA +ESA AL
Sbjct: 141 VDRTIYTGNIHSGLSQQEVSMLFSS-CGDVTQVKMAGDATHSTRYAFIEFATSESAAMAL 199
Query: 234 NCSGAVLGSLPIRVSPSKTPV-RP 256
N G ++ I+V+ SK + RP
Sbjct: 200 NLHGMMVAGRAIKVNRSKHSIGRP 223
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
A QD V RT+Y +I +++++++ LF +CG V ++ GD R+AF+EF E
Sbjct: 136 AGQDSV-DRTIYTGNIHSGLSQQEVSMLFSSCGDVTQVKMAGDATHSTRYAFIEFATSES 194
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIA 157
A AL+L G M+ ++V SK +I
Sbjct: 195 AAMALNLHGMMVAGRAIKVNRSKHSIG 221
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARA 133
E +RTV+V ++D V E+ L F CG + D R+ P+ + FA++EF ++
Sbjct: 686 EAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVRKPSGQSKGFAYIEFEEKSSLAF 745
Query: 134 ALSLAGTMLGFYPVRVLP----SKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVT 188
ALS + PV V P SKTA+ P + T F P RT++ +D T
Sbjct: 746 ALSKDRQFMNGRPVLVDPCVDRSKTALRPKHQTGFDP----------RTVFVKRLDHSCT 795
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF-AMAESAIAALNCSGAVLGSLPIR 246
+ D++ FE G V+ +R++ R A+VEF A ++A A +N A ++
Sbjct: 796 EQDVRTLFEQY-GAVKEVRMVTTLAGKPRGFAYVEFEASRDAATAIMNLDKAEFKGRQLQ 854
Query: 247 VSPSKTPVRPRA 258
V+ S P + A
Sbjct: 855 VALSNPPSKGHA 866
>gi|291242201|ref|XP_002740997.1| PREDICTED: splicing factor, arginine/serine-rich 12-like
[Saccoglossus kowalevskii]
Length = 574
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 75 EVIRRTVYVSDIDQQ-VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
E IRRT+YV ++D Q VT EQL F G+V R+ GD RFAFVEF+D+ A
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFSDQNSVAA 225
Query: 134 ALSLAGTMLGFYPVRVLPSKTAI 156
AL+ G M G P+++ S AI
Sbjct: 226 ALTYNGVMFGGRPLKINHSNNAI 248
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E RTIY N+D + + L F S GEV+ +R+ GD TR AFVEF+ S A
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFSDQNSVAA 225
Query: 232 ALNCSGAVLGSLPIRVSPSKTP-VRPRAPRP 261
AL +G + G P++++ S V+P+ P
Sbjct: 226 ALTYNGVMFGGRPLKINHSNNAIVKPQTKTP 256
>gi|224109734|ref|XP_002333211.1| predicted protein [Populus trichocarpa]
gi|222835117|gb|EEE73552.1| predicted protein [Populus trichocarpa]
Length = 50
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 37/42 (88%)
Query: 220 FVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRP 261
F++ AE AIAALNCSGAVLGSLPIRVSPSKTPVRPR PRP
Sbjct: 6 FLQLLQAEGAIAALNCSGAVLGSLPIRVSPSKTPVRPRIPRP 47
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 122 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 161
F++ EGA AAL+ +G +LG P+RV PSKT + P P
Sbjct: 6 FLQLLQAEGAIAALNCSGAVLGSLPIRVSPSKTPVRPRIP 45
>gi|340385705|ref|XP_003391349.1| PREDICTED: hypothetical protein LOC100639209, partial [Amphimedon
queenslandica]
Length = 358
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
+ IRRT+YV ++ + +Q+ F TCG++ R+ GD RFAFVEF + E + A
Sbjct: 39 DEIRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVA 98
Query: 135 LSLAGTMLGFYPVRVLPSKTAI 156
L G M G P++V SK AI
Sbjct: 99 LQYNGAMFGDRPIKVNHSKNAI 120
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 149 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 208
VLPS + P+ P DE RTIY N+ + + FF++ CGE++ +R+
Sbjct: 22 VLPS---MPPITGNVDPSKIDE---IRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 74
Query: 209 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP-VRPRAPRP 261
GD TR AFVEFA ES AL +GA+ G PI+V+ SK V+P+ P
Sbjct: 75 AGDETQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSKNAIVKPQGKAP 128
>gi|413944368|gb|AFW77017.1| hypothetical protein ZEAMMB73_226641 [Zea mays]
Length = 273
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 7/62 (11%)
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
+S+DE EMC+RTIYCTNIDKKVTQ D+KLFFES+CGE+ D + + + F++F +
Sbjct: 178 QSDDECEMCARTIYCTNIDKKVTQADLKLFFESICGEI-------DLETNKIMDFIKFDV 230
Query: 226 AE 227
Sbjct: 231 GN 232
>gi|340382751|ref|XP_003389881.1| PREDICTED: hypothetical protein LOC100632051 [Amphimedon
queenslandica]
Length = 475
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 136
IRRT+YV ++ + +Q+ FLTCG++ R+ GD RFAFVEF + E + AL
Sbjct: 174 IRRTIYVGNLSSTLHADQVMNFFLTCGEIKYVRMAGDEMQPTRFAFVEFANPESVQVALQ 233
Query: 137 LAGTMLGFYPVRVLPSKTAI 156
G M G P++V SK AI
Sbjct: 234 YNGAMFGDRPIKVNHSKNAI 253
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 149 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 208
VLPS + P+ P DE RTIY N+ + + FF + CGE++ +R+
Sbjct: 155 VLPS---MPPITGNVDPSKIDE---IRRTIYVGNLSSTLHADQVMNFFLT-CGEIKYVRM 207
Query: 209 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP-VRPRAPRP 261
GD TR AFVEFA ES AL +GA+ G PI+V+ SK V+P+ P
Sbjct: 208 AGDEMQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSKNAIVKPQGKAP 261
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 129
+A + E IRRTV+V+++D ++T E L + F +CG + R+ GD R+A++EF + +
Sbjct: 152 DANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTRYAYIEFAETQ 211
Query: 130 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 189
+AL +G + G P++V SK A++ P P+ D + C + KV
Sbjct: 212 AIVSALQYSGAIFGGKPIKVTHSKNAVS--KPP--PKHSDRKRACFGVFNGMGVQVKVLH 267
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQH 214
+ SVC + ++ L+G H
Sbjct: 268 A---RWLHSVCHCLYQMVLVGRTGH 289
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E RT++ N+D ++T ++ L F S CG+++ +R+ GD TR A++EFA ++ ++
Sbjct: 157 EEIRRTVFVNNLDPEIT-AEMLLSFFSSCGDIKYIRMGGDDGKPTRYAYIEFAETQAIVS 215
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
AL SGA+ G PI+V+ SK V + PP H
Sbjct: 216 ALQYSGAIFGGKPIKVTHSKNAV---SKPPPKH 245
>gi|340383093|ref|XP_003390052.1| PREDICTED: hypothetical protein LOC100637518 [Amphimedon
queenslandica]
Length = 428
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
+ IRRT+YV ++ + +Q+ F TCG++ R+ GD RFAFVEF + E + A
Sbjct: 107 DEIRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVA 166
Query: 135 LSLAGTMLGFYPVRVLPSKTAI 156
L G M G P++V SK AI
Sbjct: 167 LQYNGAMFGDRPIKVNHSKNAI 188
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 153 KTAIAPVNPTFLPRSED----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 208
++A APV P+ P + + + + RTIY N+ + + FF++ CGE++ +R+
Sbjct: 84 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 142
Query: 209 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP-VRPRAPRP 261
GD TR AFVEFA ES AL +GA+ G PI+V+ SK V+P+ P
Sbjct: 143 AGDETQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSKNAIVKPQGKAP 196
>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
Length = 401
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR 207
S+DEREMC+RTIY TNIDKKVTQ D+KLFFES+CGE++ R
Sbjct: 298 NSDDEREMCARTIYRTNIDKKVTQADLKLFFESICGELKVCR 339
>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
Length = 364
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR 207
+S+DEREMC+RTIYCTNIDKKVTQ D KLFFES CGE++ R
Sbjct: 261 QSDDEREMCARTIYCTNIDKKVTQTDPKLFFESKCGELKVCR 302
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVE 124
A Q + ++YV D++ VT+ QL LF GQVV R+C D NS L +A+V
Sbjct: 110 HAGGAAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVN 169
Query: 125 FTDE-EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 183
+++ + ARA +L L P+RV+ S R R S I+ N+
Sbjct: 170 YSNPMDAARAMEALNFAPLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNL 217
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLG 241
DK + + F S G + ++ + D S FV++ ESA +A+ +G ++
Sbjct: 218 DKTIDNKTLHDTF-SAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLIN 276
Query: 242 SLPIRVSP 249
P+ V P
Sbjct: 277 DKPVYVGP 284
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRR +A D+ + +Y+ ++D +T++QL LF G++ C+I D N V +
Sbjct: 387 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKG 445
Query: 121 A-FVEF-TDEEGARAALSLAGTMLGFYPVRV 149
+ FV F T EE ++A + G M+ P+ V
Sbjct: 446 SGFVSFSTREEASQALTEMNGKMISGKPLYV 476
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 9/183 (4%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGA 131
D+ V+V ++ + T+E L +F G + + + R F FV F + ++ A
Sbjct: 296 DKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAA 355
Query: 132 RAALSLAGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMC-SRTIYCTNIDKKV 187
RA L G + +Y R + F +D + + +Y N+D +
Sbjct: 356 RAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGI 415
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSLPI 245
T ++ F S G++ +++ D S FV F+ E A AL +G ++ P+
Sbjct: 416 TDDQLRELF-SNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPL 474
Query: 246 RVS 248
V+
Sbjct: 475 YVA 477
>gi|198429455|ref|XP_002129672.1| PREDICTED: similar to splicing factor, arginine/serine-rich 12
[Ciona intestinalis]
Length = 373
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 77 IRRTVYVSDID-QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
I+RT+YV ++D +Q T +QL T F TCG+V R+ GD RFAF+EF E +A+
Sbjct: 118 IKRTIYVGNLDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAM 177
Query: 136 SLAGTMLGFYPVRVLPS-----KTAIAPVNPT 162
L GT+ G +++ S K A+ PVN T
Sbjct: 178 KLNGTLFGDRALKINHSNNAIVKPAVKPVNDT 209
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 18/199 (9%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRI---CGDPNS-VLRFAFVEFTDEEGARAALS 136
+ V++I T EQ+ TLF G V+ + DPN+ + AF+++ D A
Sbjct: 7 IQVTNIAPTATLEQIHTLFDHLGTFVEFELFPRNPDPNNPGTKVAFIKYADPSSVGVAQH 66
Query: 137 LAGTMLGF-------YPVRVLPSKT-AIAPVNP-TFLPRS-----EDEREMCSRTIYCTN 182
L T+ Y ++P++T A+ P T L ++ + + + RTIY N
Sbjct: 67 LTSTVFIDRALICVPYTDGIIPNETVAMQFATPATALIQAGGVIDQTKLDEIKRTIYVGN 126
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGS 242
+D K D + F CGEV+ +R+ GD TR AF+EFA E +A+ +G + G
Sbjct: 127 LDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAMKLNGTLFGD 186
Query: 243 LPIRVSPSKTPVRPRAPRP 261
++++ S + A +P
Sbjct: 187 RALKINHSNNAIVKPAVKP 205
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 136
++YV D++ VT+ QL LF GQVV R+C D NS L +A+V +++ + ARA +
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L P+RV+ S R R S I+ N+DK + + F
Sbjct: 183 LNFAPLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHDTF 230
Query: 197 ESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 249
S G + ++ + D S FV++ ESA +A+ +G ++ P+ V P
Sbjct: 231 -SAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGP 284
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRR +A D+ + +Y+ ++D +T++QL LF G++ C+I D N V +
Sbjct: 387 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKG 445
Query: 121 A-FVEF-TDEEGARAALSLAGTMLGFYPVRV 149
+ FV F T EE ++A + G M+ P+ V
Sbjct: 446 SGFVSFSTREEASQALTEMNGKMISGKPLYV 476
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 9/183 (4%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGA 131
D+ V+V ++ + T+E L +F G + + + R F FV F + ++ A
Sbjct: 296 DKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAA 355
Query: 132 RAALSLAGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMC-SRTIYCTNIDKKV 187
RA L G + +Y R + F +D + + +Y N+D +
Sbjct: 356 RAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGI 415
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSLPI 245
T ++ F S G++ +++ D S FV F+ E A AL +G ++ P+
Sbjct: 416 TDDQLRELF-SNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPL 474
Query: 246 RVS 248
V+
Sbjct: 475 YVA 477
>gi|413941688|gb|AFW74337.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 50
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Query: 218 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
I F+ F AESA AALNCSG +LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 5 ICFLIF-QAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 50
>gi|146088402|ref|XP_001466041.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
gi|134070143|emb|CAM68476.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
Length = 544
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 22/165 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 138
V+V +D + ++L F CG+V+ C++ D + + FV+F EGA+AAL +
Sbjct: 100 NVFVKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMN 159
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS----RTIYCTNIDKKVTQGDIKL 194
G+ LG S+ +AP F+ R +RE+ + R IY NI T+ D+K
Sbjct: 160 GSKLG-------DSEVVVAP----FVRRV--DREVMAAKSFRNIYIKNIAAAATEADVKA 206
Query: 195 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES---AIAALNCS 236
E G+V L L T+ A V F E+ AIAALN S
Sbjct: 207 AAEKF-GKVNSLFLSEHAPFPTKFALVAFEEHEAAVQAIAALNES 250
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 76 VIRRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDE 128
V R +VYV D ID EE + LF T VV ++C D L + +V F D
Sbjct: 5 VQRTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADA 64
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E AL+ G G +RV+ F R +R+ ++ +D +
Sbjct: 65 EKVIDALNYTGIAPGLQ-IRVM------------FSIRDPLQRKSGMNNVFVKKLDTAIN 111
Query: 189 QGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ F + CG V ++ L +S FV+F AE A AAL+ +G+ LG + V
Sbjct: 112 AKELQAAF-TKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSKLGDSEVVV 170
Query: 248 SP 249
+P
Sbjct: 171 AP 172
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 136
R +YV + +T+++L +F G++ C I +PN + FAFV F D + A AAL S
Sbjct: 289 RNLYVKHLPDDITDDKLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRS 348
Query: 137 LAGTML 142
L G L
Sbjct: 349 LNGQPL 354
>gi|398016302|ref|XP_003861339.1| poly(A)-binding protein, putative [Leishmania donovani]
gi|322499565|emb|CBZ34638.1| poly(A)-binding protein, putative [Leishmania donovani]
Length = 544
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 22/165 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 138
V+V +D + ++L F CG+V+ C++ D + + FV+F EGA+AAL +
Sbjct: 100 NVFVKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMN 159
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS----RTIYCTNIDKKVTQGDIKL 194
G+ LG S+ +AP F+ R +RE+ + R IY NI T+ D+K
Sbjct: 160 GSKLG-------DSEVVVAP----FVRRV--DREVMAAKSFRNIYIKNIAAAATEADVKA 206
Query: 195 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES---AIAALNCS 236
E G+V L L T+ A V F E+ AIAALN S
Sbjct: 207 AAEKF-GKVNSLFLSEHAPFPTKFALVAFEEHEAAVQAIAALNES 250
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 76 VIRRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDE 128
V R +VYV D ID EE + LF T VV ++C D L + +V F D
Sbjct: 5 VQRTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADA 64
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E AL+ G G +RV+ F R +R+ ++ +D +
Sbjct: 65 EKVIDALNYTGIAPG-RQIRVM------------FSIRDPLQRKSGMNNVFVKKLDTAIN 111
Query: 189 QGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ F + CG V ++ L +S FV+F AE A AAL+ +G+ LG + V
Sbjct: 112 AKELQAAF-TKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSKLGDSEVVV 170
Query: 248 SP 249
+P
Sbjct: 171 AP 172
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 136
R +YV + +T+++L +F G++ C I +PN + FAFV F D + A AAL S
Sbjct: 289 RNLYVKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRS 348
Query: 137 LAGTML 142
L G L
Sbjct: 349 LNGQPL 354
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAF 122
MN + ++D RTV+V ++ VTE+++ +F CG V D R+ + + + +
Sbjct: 603 MNPKKKKPERDNNDPRTVFVKNLGYNVTEKRIRKVFSECGTVRDVRMVTNYQKKFKGYCY 662
Query: 123 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKT-AIAPVNPTFLPRSEDEREMCSRTIYCT 181
VEF DEE A+ AL + P+ V PSK + AP FL E +M ++ +
Sbjct: 663 VEFEDEESAKKALKKDRETINDRPMYVDPSKDRSGAPAEKKFLY----ENKMEKNKLFVS 718
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAI-AALNCSGAV 239
+ + +T +++ F S G+++ +R++ + +A+V+F SA A +
Sbjct: 719 GLPRTLTTEELEKTF-SKFGKLKGVRIVTFKSGVPKGLAYVDFENEASATRAVMGLDNTQ 777
Query: 240 LGSLPIRVSPSKTPVRPRAP 259
+G I V+ S P R +AP
Sbjct: 778 IGEHTITVAISNPPTR-KAP 796
>gi|428166786|gb|EKX35755.1| hypothetical protein GUITHDRAFT_118030 [Guillardia theta CCMP2712]
Length = 254
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS------TRIAFVEFAM 225
E S TIY N++ +T + FF +VCG+V +R+ GD + TR AFV+F
Sbjct: 16 EGASCTIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPATAFRFDRTRFAFVQFLS 75
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTP-VRPRA 258
E A A+ SG +LG LPI+ P+K P V+PR+
Sbjct: 76 KEQADIAMTLSGTILGGLPIKCGPAKNPIVQPRS 109
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGD-PNSVLRF-----AFVEFTDEEGAR 132
T+YV +++ +T EQL F CGQV+ R+ GD P + RF AFV+F +E A
Sbjct: 21 TIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPATAFRFDRTRFAFVQFLSKEQAD 80
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
A++L+GT+LG P++ P+K NP PRS
Sbjct: 81 IAMTLSGTILGGLPIKCGPAK------NPIVQPRS 109
>gi|157870420|ref|XP_001683760.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
gi|68126827|emb|CAJ04400.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
Length = 544
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 138
V+V +D + ++L F CG+V+ C++ D + + FV+F +G +AAL +
Sbjct: 100 NVFVKKLDTAINAKELQAAFSKCGRVLSCKVALDSAGNSKGYGFVQFETADGTKAALEMN 159
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLF 195
G+ LG S+ +AP R D M + R IY NI T+ D+K
Sbjct: 160 GSKLG-------DSEVVVAP-----FVRRVDREAMAAKSFRNIYIKNITASATEADVKAI 207
Query: 196 FESVCGEVQRLRLLGDYQHSTR---IAFVEFAMAESAIAALNCS 236
E G+V L L + T+ +AF E A AIAALN S
Sbjct: 208 VEEF-GKVDSLFLSEHARFPTKFALVAFEEHQAAVQAIAALNES 250
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 22/180 (12%)
Query: 78 RRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDEEG 130
R +VYV D ID EE + LF T VV ++C D L + +V F D E
Sbjct: 7 RTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADAEK 66
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
AL+ G G +RV+ F R +R+ ++ +D +
Sbjct: 67 VIDALNYTGIAPG-RQIRVM------------FSIRDPLQRKSGMNNVFVKKLDTAINAK 113
Query: 191 DIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSP 249
+++ F S CG V ++ L +S FV+F A+ AAL +G+ LG + V+P
Sbjct: 114 ELQAAF-SKCGRVLSCKVALDSAGNSKGYGFVQFETADGTKAALEMNGSKLGDSEVVVAP 172
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 136
R +Y+ + +T+++L +F G++ C I +PN L+ FAFV F D++ A AAL S
Sbjct: 289 RNLYIKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQHASAALRS 348
Query: 137 LAGTML 142
L G L
Sbjct: 349 LNGHPL 354
>gi|401423147|ref|XP_003876060.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492301|emb|CBZ27575.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 544
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 138
V+V +D V ++L F CG+V+ C++ D + + FV+F +GA+AAL +
Sbjct: 100 NVFVKKLDTAVNAKELQAAFTKCGRVLSCKVALDSAGNSKGYGFVQFETADGAKAALEMD 159
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS----RTIYCTNIDKKVTQGDIKL 194
G+ LG V V P FL R +RE+ + R IY N+ V + D+K
Sbjct: 160 GSKLGDCEVVVAP-----------FLRRV--DREVMAAKSFRNIYIKNLKATVAEADVKT 206
Query: 195 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES---AIAALNCS 236
E+ G+V L L T+ A V F E+ AIAALN S
Sbjct: 207 TVETF-GKVNSLFLSEHAPFPTKFALVAFEEHEAAVKAIAALNES 250
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 78/182 (42%), Gaps = 22/182 (12%)
Query: 76 VIRRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDE 128
V R +VYV D ID EE + LF T VV ++C D L + +V F D
Sbjct: 5 VQRTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTPADA 64
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E AL+ G G +RV+ F R +R+ ++ +D V
Sbjct: 65 EKVIDALNYTGITPG-RQIRVM------------FSIRDPIQRKSGMNNVFVKKLDTAVN 111
Query: 189 QGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ F + CG V ++ L +S FV+F A+ A AAL G+ LG + V
Sbjct: 112 AKELQAAF-TKCGRVLSCKVALDSAGNSKGYGFVQFETADGAKAALEMDGSKLGDCEVVV 170
Query: 248 SP 249
+P
Sbjct: 171 AP 172
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 136
R +YV + +T+++L +F G++ C I +PN + FAFV F D + A AAL S
Sbjct: 289 RNLYVKHLPDDITDDRLREIFAPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRS 348
Query: 137 LAGTML 142
L G L
Sbjct: 349 LNGHSL 354
>gi|348524300|ref|XP_003449661.1| PREDICTED: hypothetical protein LOC100695937 [Oreochromis
niloticus]
Length = 459
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T EQL F G V R+ GD RFAFVEF ++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARAL 222
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+L G M G P++V S AI
Sbjct: 223 TLNGVMFGDRPLKVNHSNNAI 243
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T + L F G+V+ +R+ GD TR AFVEF ES AL
Sbjct: 165 RTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARALTL 224
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++V+ S +
Sbjct: 225 NGVMFGDRPLKVNHSNNAI 243
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
R V+V ++D+ + +QL+ +F G+V+ C++ D + V + + FV+F E A +
Sbjct: 30 RGNVFVKNLDESIDNKQLSDMFSAFGKVLSCKVVRDASGVSKGYGFVQFYSELSVNIACN 89
Query: 137 L-AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
+ GT++ + V P F+ R + + +Y N+ + T D+K+
Sbjct: 90 VRNGTLIRNQHIHVSP-----------FVSRRQWDESRVFTNVYVKNLAETTTDDDLKMI 138
Query: 196 FESVCGEVQRLRLLGDYQHSTRI-AFVEFAMAESAIAALN-CSGAVLGSLPIRV 247
FE GE+ ++ D + +R+ FV F AE+A+ A++ +G ++ + V
Sbjct: 139 FEEF-GEITSAVVMKDKEGKSRMFGFVNFEKAEAAVTAIDKMNGTIVDEKELHV 191
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 49 TAFQKRNGYSQGKRRMNC----RTSNAQQD-------EVIRR--------TVYVSDIDQQ 89
TA K NG ++ ++ R N QD E I+R +YV ++D
Sbjct: 174 TAIDKMNGTIVDEKELHVGRAQRKKNRIQDLKVIFKLEKIKRDMKTRKGTNLYVKNLDYS 233
Query: 90 VTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLAGTMLGFYPV 147
V +L LF G ++ C++ PN + + FVEF T EE ++A L + G ++G P+
Sbjct: 234 VDNTKLQELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMNGKVVGNKPI 293
Query: 148 RV 149
V
Sbjct: 294 YV 295
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D++ VT+ QL LF GQVV R+C D NS L +A+V F++ A AL
Sbjct: 38 SLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALE- 96
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F P+ P + + +P+ R S I+ N+DK + + F
Sbjct: 97 ---MLNFVPLNNKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKTIDNKTLHDTF- 145
Query: 198 SVCGEVQRLRL-LGDYQHSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVSP 249
S G + ++ D S FV++ A+SA+ +LN G ++ P+ V P
Sbjct: 146 SAFGAILSCKVATDDMGQSKGFGFVQYEKEEFAQSAMKSLN--GMLINDKPVYVGP 199
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRR +A D+ + +Y+ ++D ++++QL LF T G++ C++ D N V +
Sbjct: 302 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSKG 360
Query: 121 A-FVEF-TDEEGARAALSLAGTMLGFYPVRV 149
+ FV F T EE ++A + G ML P+ V
Sbjct: 361 SGFVAFSTREEASQAITEMNGKMLSGKPLYV 391
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 91/193 (47%), Gaps = 18/193 (9%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE RT+YV ++D VTEE L LF G V C++ +P S +AF+EF GA
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSD-PYAFLEFDTHSGAAT 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL+ L + + + A P N L S I+ ++ ++ +K
Sbjct: 62 ALAAMNGRL--FLDKEMKVNWATTPGNQPKLDTSNHYH------IFVGDLSPEIETHTLK 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
F + GE+ R++ D Q S AFV F + AE+AI ++N G LGS IR +
Sbjct: 114 EAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMN--GQWLGSRSIRTN 170
Query: 249 PS-KTPVRPRAPR 260
S + P PRAP
Sbjct: 171 WSTRKPPPPRAPN 183
>gi|389744897|gb|EIM86079.1| hypothetical protein STEHIDRAFT_98435 [Stereum hirsutum FP-91666
SS1]
Length = 1064
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 41 IKVLCLFNT-----AFQKRN----GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVT 91
IK+ L NT F +R ++ K+R+N R T+YV++ ++V
Sbjct: 679 IKITSLPNTHVATVEFSERESVPAALTKDKKRINGEEVAVHL--AWRSTLYVTNFPERVD 736
Query: 92 EEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALSLAGTMLG-FYPVRV 149
+E++ +F G + D R + RF +V+FT + A+A+L L G L P+ V
Sbjct: 737 DEEVRKIFGKYGLIFDVRWPSKKFKATRRFCYVQFTSPDAAKASLELHGHELEPNLPLNV 796
Query: 150 LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL 209
S NP D + +R +Y + + K + D++ F++ G ++ +R+
Sbjct: 797 YIS-------NPERKKERTDA-DANAREVYVSGLSKFADKSDLERVFKTY-GPIKEIRMT 847
Query: 210 GDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 262
D Q ++ AFVEF + A+ ALN + L + + V+ S + VR R P
Sbjct: 848 VDEQGRSKGFAFVEFEQEKDALNALNANNHELKARRMAVTMSDSRVRSRRKDQP 901
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 26/170 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 139
TV+V+D+ T++ L LF CG + D +I PN+ A VEF++ E AAL+
Sbjct: 651 TVFVADLPSNTTDDDLKALFKDCGSIRDIKITSLPNT--HVATVEFSERESVPAALTKDK 708
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
+ V V RS T+Y TN ++V +++ F
Sbjct: 709 KRINGEEVAV------------HLAWRS---------TLYVTNFPERVDDEEVRKIF-GK 746
Query: 200 CGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLG-SLPIRV 247
G + +R ++ + R +V+F ++A A+L G L +LP+ V
Sbjct: 747 YGLIFDVRWPSKKFKATRRFCYVQFTSPDAAKASLELHGHELEPNLPLNV 796
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 20/197 (10%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
+ +E +T+YV ++D VTE+ L TLF G V C+I +PN+ +AFVEF + +
Sbjct: 2 SNSEENYPKTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNNDP-YAFVEFVNHQA 60
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQ 189
A AL + VL + VN P ++ +++ S I+ ++ ++
Sbjct: 61 ASTAL------IAMNKRHVLEKEIK---VNWATSPGNQPKQDTSSHHHIFVGDLSPEIEM 111
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLP 244
++ F + GE+ R++ D Q S AFV F A AESAI A+N G LG+
Sbjct: 112 HTLREAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHAMN--GQWLGNRS 168
Query: 245 IRVSPS-KTPVRPRAPR 260
IR + S + P PR R
Sbjct: 169 IRTNWSTRKPPPPRTER 185
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L TLF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 DESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSAST 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL+ L + + + A +P N P+ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLDKEMKVNWATSPGN---QPKQDTSNH---HHIFVGDLSPEIETETLR 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
F + GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR +
Sbjct: 114 EAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMN--GQWLGSRSIRTN 170
Query: 249 PSKTPVRPRAPRPP 262
S R P PP
Sbjct: 171 WST-----RKPPPP 179
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 129
+QD ++V D+ ++ E L F G++ +CRI DP ++ +AFV F +
Sbjct: 89 KQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKKA 148
Query: 130 GARAAL-SLAGTMLGFYPVRVL-------PSKTAIA---PVNPTFLPRSEDEREMCSRTI 178
A A+ ++ G LG +R P KT A PTF ++ + T+
Sbjct: 149 EAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTF-DEVYNQSSPTNCTV 207
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
YC +T+ ++ F S G +Q +R+ D + AF++FA ESA A+
Sbjct: 208 YCGGFTTGLTEDLMQKTF-SQFGVIQDIRVFKDKGY----AFIKFATKESATHAI 257
>gi|301609359|ref|XP_002934235.1| PREDICTED: hypothetical protein LOC100329115 [Xenopus (Silurana)
tropicalis]
Length = 566
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRT+YV +++ Q T EQL F G V R+ GD RFAFVEF+D+ AL
Sbjct: 200 IRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRFAFVEFSDQNSVTRAL 259
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 260 TFNGVMFGDRPLKINHSNNAI 280
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 150 LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL 209
LP + V+PT + DE RTIY N++ + T + L F G+V+ +R+
Sbjct: 183 LPQPPLMGNVDPTKV----DE---IRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMA 235
Query: 210 GDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
GD TR AFVEF+ S AL +G + G P++++ S +
Sbjct: 236 GDETQPTRFAFVEFSDQNSVTRALTFNGVMFGDRPLKINHSNNAI 280
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 DEAYPKTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSAST 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL + + + + A +P N P+++ I+ ++ ++ ++
Sbjct: 62 ALIAMNKRV--FLDKEMKVNWATSPGN---QPKTDTSNH---HHIFVGDLSPEIETDTLR 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
F + GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR +
Sbjct: 114 EAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMN--GQWLGSRSIRTN 170
Query: 249 PS-KTPVRPRAPRP 261
S + P PRA +P
Sbjct: 171 WSTRKPPPPRAEKP 184
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 131
++ + ++YV D++Q VTE QL LF GQ+V R+C D S L + +V + + A
Sbjct: 24 NQFVSTSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDA 83
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
AL + L F PV P + + +PT R+ + IY N+DK +
Sbjct: 84 AQALEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGAGNIYIKNLDKAIDNKA 132
Query: 192 IKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
+ F S G + ++ D S FV+F ESA A++ +G +L + V P
Sbjct: 133 LHDTF-SAFGNILSCKVATDSAGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGP 191
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+YV ++D +T+++L LF G + C++ DPN V + + FV + T EE ++A +
Sbjct: 312 NLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEM 371
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 372 NGKMIVSKPLYV 383
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGA 131
D+ VYV ++ + TEE L +F G + + D + R F FV F + ++ A
Sbjct: 203 DKTKFNNVYVKNLSETTTEEDLKKIFGEYGAITSAVVMRDGDGKSRCFGFVNFENPDDAA 262
Query: 132 RAALSLAGTMLG---FYPVRVLPSKTAIAPVNPTF---LPRSEDEREMCSRTIYCTNIDK 185
R+ +L G +Y + + F L + D+ E + +Y N+D
Sbjct: 263 RSVEALNGKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEGLN--LYVKNLDD 320
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSL 243
+T +K F S G + +++ D S FV ++ AE A AL +G ++ S
Sbjct: 321 SITDDKLKELF-SEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEMNGKMIVSK 379
Query: 244 PIRVS 248
P+ V+
Sbjct: 380 PLYVA 384
>gi|260821314|ref|XP_002605978.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
gi|229291315|gb|EEN61988.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
Length = 645
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQ-VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV ++D VT EQL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 206 IRRTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFADQTSVAKAL 265
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
G M G P+++ S AI
Sbjct: 266 QYNGIMFGNRPLKINHSNNAI 286
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N+D + L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 208 RTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFADQTSVAKALQY 267
Query: 236 SGAVLGSLPIRVSPSKT 252
+G + G+ P++++ S
Sbjct: 268 NGIMFGNRPLKINHSNN 284
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T++V ++ V + + F CG+VVD R+ D + + F VEF E A++AL L
Sbjct: 355 KTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSALEL 414
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS---EDEREMCSRTIYCTNIDKKVTQGDIKL 194
G L VR+ +A F P S ++ S+T++ DK + + +I+
Sbjct: 415 NGQELLQRGVRLD-----LARERGAFTPNSTGNQNSGRGQSQTVFVRGFDKSLGEDEIRA 469
Query: 195 FFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSP 249
E + CG+ R+ + DY +S A+++F ++S A+ G+ L P+ +
Sbjct: 470 KLEQHFASCGQASRVSIPKDYDTGYSKGFAYMDFKDSDSFNKAIELHGSELDGYPLSIDE 529
Query: 250 SK 251
+K
Sbjct: 530 AK 531
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
S+T++ N+ V + DI+ FF+ CGEV +RL D + VEFA AE+A +AL
Sbjct: 354 SKTLFVGNLSFSVQRSDIESFFQE-CGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSAL 412
Query: 234 NCSGAVL 240
+G L
Sbjct: 413 ELNGQEL 419
>gi|432104582|gb|ELK31194.1| Splicing regulatory glutamine/lysine-rich protein 1 [Myotis
davidii]
Length = 614
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 143 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 202
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 203 AFNGVMFGDRPLKINHSNNAI 223
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 145 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 204
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 205 NGVMFGDRPLKINHSNNAI 223
>gi|410929297|ref|XP_003978036.1| PREDICTED: uncharacterized protein LOC101067881 [Takifugu rubripes]
Length = 451
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G V R+ GD RFAFVEF+++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQESVARAL 222
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 223 TFNGVMFGDRPLKINHSNNAI 243
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F G V+ +R+ GD TR AFVEF+ ES AL
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQESVARALTF 224
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 225 NGVMFGDRPLKINHSNNAI 243
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 207 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 266
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 267 AFNGVMFGDRPLKINHSNNAI 287
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 209 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 268
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 269 NGVMFGDRPLKINHSNNAI 287
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 131
+++ ++YV D+D VT+ QL LF GQVV RIC D L + +V F++ A
Sbjct: 19 NQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDA 78
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
A+ + L F P+ P + + +P+ R+ + I+ N+D+ + D
Sbjct: 79 AKAMDV----LNFTPLNNKPIRIMYSHRDPSV-------RKSGAANIFIKNLDRAI---D 124
Query: 192 IKLFFE--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRV 247
K ++ S+ G + ++ D S FV+F ESA +A++ +G +L P+ V
Sbjct: 125 HKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYV 184
Query: 248 S 248
Sbjct: 185 G 185
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D VT+E+L+ LF G V C+I DP + R + FV F T EE
Sbjct: 301 DKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEAT 360
Query: 132 RAALSLAGTMLGFYPVRVLPSK 153
RA + G M+ P+ V P++
Sbjct: 361 RALAEMNGKMVAGKPLYVAPAQ 382
>gi|193787205|dbj|BAG52411.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|50949479|emb|CAH10414.1| hypothetical protein [Homo sapiens]
Length = 331
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 126 NGVMFGDRPLKINHSNNAI 144
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|350594366|ref|XP_003134051.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1,
partial [Sus scrofa]
Length = 587
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 218 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 277
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 278 AFNGVMFGDRPLKINHSNNAI 298
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 220 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 279
Query: 236 SGAVLGSLPIRVSPSKT 252
+G + G P++++ S
Sbjct: 280 NGVMFGDRPLKINHSNN 296
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 131
+++ ++YV D+D VT+ QL LF GQVV RIC D L + +V F++ A
Sbjct: 19 NQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDA 78
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
A+ + L F P+ P + + +P+ R+ + I+ N+D+ + D
Sbjct: 79 AKAMDV----LNFTPLNNKPIRIMYSHRDPSV-------RKSGAANIFIKNLDRAI---D 124
Query: 192 IKLFFE--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRV 247
K ++ S+ G + ++ D S FV+F ESA +A++ +G +L P+ V
Sbjct: 125 HKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYV 184
Query: 248 S 248
Sbjct: 185 G 185
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D VT+E+L+ LF G V C+I DP + R + FV F T EE
Sbjct: 301 DKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEAT 360
Query: 132 RAALSLAGTMLGFYPVRVLPSK 153
RA + G M+ P+ V P++
Sbjct: 361 RALAEMNGKMVAGKPLYVAPAQ 382
>gi|119571716|gb|EAW51331.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Homo
sapiens]
Length = 623
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|26333193|dbj|BAC30314.1| unnamed protein product [Mus musculus]
Length = 318
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 128
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 129 NGVMFGDRPLKINHSNNAI 147
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|395510384|ref|XP_003759457.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Sarcophilus harrisii]
Length = 596
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 222
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 223 AFNGVMFGDRPLKINHSNNAI 243
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 224
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 225 NGVMFGDRPLKINHSNNAI 243
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|297294417|ref|XP_001087835.2| PREDICTED: hypothetical protein LOC697731 isoform 1 [Macaca
mulatta]
Length = 516
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|431907792|gb|ELK11399.1| Splicing factor, arginine/serine-rich 12 [Pteropus alecto]
Length = 630
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|28703790|gb|AAH47322.1| Similar to expressed sequence AI450757, partial [Homo sapiens]
Length = 386
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|74140797|dbj|BAC29709.2| unnamed protein product [Mus musculus]
Length = 401
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 128
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 129 NGVMFGDRPLKINHS 143
>gi|351713063|gb|EHB15982.1| Splicing factor, arginine/serine-rich 12 [Heterocephalus glaber]
Length = 535
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 126 NGVMFGDRPLKINHSNNAI 144
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 126 NGVMFGDRPLKINHSNNAI 144
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 136
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A+V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L F P+ P + + +P+ R S I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 249
S G + ++ D S FV++ E+A +A+ +G ++ P+ V P
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGP 201
>gi|348553835|ref|XP_003462731.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cavia porcellus]
Length = 556
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|426246379|ref|XP_004016972.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Ovis aries]
Length = 632
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|74217177|dbj|BAC34905.2| unnamed protein product [Mus musculus]
Length = 513
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 244
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 245 NGVMFGDRPLKINHS 259
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 126 NGVMFGDRPLKINHSNNAI 144
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 82 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 141
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 142 AFNGVMFGDRPLKINHSNNAI 162
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 84 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 143
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 144 NGVMFGDRPLKINHS 158
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|395455051|ref|NP_001257421.1| splicing regulatory glutamine/lysine-rich protein 1 isoform c [Homo
sapiens]
Length = 507
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|57525681|ref|NP_001003613.1| splicing regulatory glutamine/lysine-rich protein 1 [Danio rerio]
gi|50417233|gb|AAH78219.1| Zgc:100974 [Danio rerio]
Length = 512
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 75 EVIRRTVYVSDIDQQ-VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+ IRRTVYV +++ Q T +QL F G V R+ GD RFAFVEF D++
Sbjct: 164 DEIRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVAR 223
Query: 134 ALSLAGTMLGFYPVRVLPSKTAI 156
AL+ G M G P+++ S AI
Sbjct: 224 ALTYNGVMFGDRPLKINHSNNAI 246
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F G+V+ +R+ GD TR AFVEFA +S AL
Sbjct: 168 RTVYVGNLNSQSTTADQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVARALTY 227
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 228 NGVMFGDRPLKINHSNNAI 246
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 242 NGVMFGDRPLKINHS 256
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|329663695|ref|NP_001193066.1| splicing regulatory glutamine/lysine-rich protein 1 [Bos taurus]
Length = 632
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 136
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A+V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L F P+ P + + +P+ R S I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 249
S G + ++ D S FV++ E+A +A+ +G ++ P+ V P
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGP 201
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRR +A D+ +Y+ ++D + ++QL LF G++ C+I D N V +
Sbjct: 304 KRRFEQSMKDAA-DKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKG 362
Query: 121 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 363 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAM 405
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 126 NGVMFGDRPLKINHSNNAI 144
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 126 NGVMFGDRPLKINHSNNAI 144
>gi|39645085|gb|AAH63761.1| Sfrs12 protein, partial [Mus musculus]
Length = 407
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 128
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 129 NGVMFGDRPLKINHS 143
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 145 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 204
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 205 AFNGVMFGDRPLKINHSNNAI 225
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 147 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 206
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 207 NGVMFGDRPLKINHSNNAI 225
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 136
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A+V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L F P+ P + + +P+ R S I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 249
S G + ++ D S FV++ E+A +A+ +G ++ P+ V P
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGP 201
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRR +A D+ +Y+ ++D + ++QL LF G++ C+I D N V +
Sbjct: 304 KRRFEQSMKDAA-DKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKG 362
Query: 121 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 363 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKVM 405
>gi|26336164|dbj|BAC31767.1| unnamed protein product [Mus musculus]
Length = 317
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 44 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 103
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 104 AFNGVMFGDRPLKINHSNNAI 124
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 46 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 105
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 106 NGVMFGDRPLKINHSNNAI 124
>gi|380792715|gb|AFE68233.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a,
partial [Macaca mulatta]
Length = 394
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|320166417|gb|EFW43316.1| hypothetical protein CAOG_01360 [Capsaspora owczarzaki ATCC 30864]
Length = 986
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 138
TV+VS++D + TEE + + F G +VD R+ P R + FVEF+ E A+ AL+L
Sbjct: 689 TVFVSNLDFKATEEMIRSQFEQIGNIVDVRLVRKPTGRSRGYGFVEFSSPEAAQKALALD 748
Query: 139 GTMLGFYPVRVLPS----KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
+ P+ V PS K P + D +T++ N+ + D+
Sbjct: 749 RQPVLNRPMYVSPSVDKPKDGDGPAPSRYAQDGVD-----PKTLFVRNLSSLCRRDDLVT 803
Query: 195 FFESVCGEVQ-RLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP 253
FE V R+ D + + R A+VEFA E A AL G V+ PI P
Sbjct: 804 TFEKFAKVVDVRMTRHRDGRFTGR-AYVEFANEEDAKLALAADGTVVRGQPISAQVCNPP 862
Query: 254 VRPRAPRPP 262
+ A P
Sbjct: 863 TKAAASETP 871
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 126 NGVMFGDRPLKINHSNNAI 144
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|354474059|ref|XP_003499249.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cricetulus griseus]
gi|344246968|gb|EGW03072.1| Splicing factor, arginine/serine-rich 12 [Cricetulus griseus]
Length = 611
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 244
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 245 NGVMFGDRPLKINHS 259
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 242 NGVMFGDRPLKINHSNNAI 260
>gi|296475869|tpg|DAA17984.1| TPA: splicing factor, arginine/serine-rich 12-like [Bos taurus]
Length = 325
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 74 DEVIRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 132
DE IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+
Sbjct: 130 DE-IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVP 188
Query: 133 AALSLAGTMLGFYPVRVLPSKTAI 156
AL+ G M G P+++ S AI
Sbjct: 189 RALAFNGVMFGDRPLKINHSNNAI 212
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 134 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 193
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 194 NGVMFGDRPLKINHSNNAI 212
>gi|363744206|ref|XP_424756.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Gallus gallus]
Length = 621
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 142 LGFYPVRVL-PSKTAIA-----PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
LG P L P+ TA+ P+ P DE RT+Y N++ + T D L
Sbjct: 145 LGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTADQLLE 201
Query: 196 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
F GEV+ +R+ GD TR AFVEFA S AL +G + G P++++ S +
Sbjct: 202 FFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAI 260
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 142 LGFYPVRVL-PSKTAIA-----PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
LG P L P+ TA+ P+ P DE RT+Y N++ + T D L
Sbjct: 145 LGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTADQLLE 201
Query: 196 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
F GEV+ +R+ GD TR AFVEFA S AL +G + G P++++ S +
Sbjct: 202 FFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAI 260
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 131
++ + ++YV D++Q VTE QL LF GQVV R+C D S L + +V + + A
Sbjct: 24 NQFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDA 83
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
A+ + L F PV P + + +PT R+ + IY N+DK +
Sbjct: 84 AQAIEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGTGNIYIKNLDKAIDNKA 132
Query: 192 IKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
+ F S G + ++ D S FV+F ESA A++ +G +L + V P
Sbjct: 133 LHDTF-SAFGSILSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGP 191
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+YV ++D +T+++L LF G + C++ DPN V R + FV F T EE +RA +
Sbjct: 312 NLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTEM 371
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 372 NGKMVVSKPLYV 383
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 31/194 (15%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGA 131
D+ VYV ++ + TEE L +F G + + D N R F FV F + ++ A
Sbjct: 203 DKATFNNVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDGNGKSRCFGFVNFENPDDAA 262
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--------------- 176
++ +L G V ++ +SE E E+ R
Sbjct: 263 QSVEALNGKTFDEKEWYVGKAQK-----------KSEREVELKGRFEQTLKETVDKFQGL 311
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-N 234
+Y N+D +T +K F S G + +++ D +R FV F+ AE A AL
Sbjct: 312 NLYVKNLDDSITDDKLKELF-SEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTE 370
Query: 235 CSGAVLGSLPIRVS 248
+G ++ S P+ V+
Sbjct: 371 MNGKMVVSKPLYVA 384
>gi|149059243|gb|EDM10250.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Rattus
norvegicus]
Length = 610
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 244
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 245 NGVMFGDRPLKINHSNNAI 263
>gi|148686564|gb|EDL18511.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Mus
musculus]
Length = 223
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 94 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 153
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 154 NGVMFGDRPLKINHSNNAI 172
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 137
TV+V ++ T E++ T F CG V D R+ PN V FA ++FT EG +AA++L
Sbjct: 82 TVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMAL 141
Query: 138 AGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
GT +RV ++ A + + P+++ ++ N+ + +K F
Sbjct: 142 DGTEFMGRTIRVDDAQPAQGRSTDTNYGPKTD--------KVFVANLSYDTDEDSLKQAF 193
Query: 197 E---SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPSKT 252
E ++ GE+ L + D IA+++F + A AA+ +G L PIR S
Sbjct: 194 EKFGTIVGEIG-LPISRDTGRIRGIAYIQFETEDEAEAAVKGMNGVYLDGRPIRTDFSGD 252
Query: 253 PVRPR-APRP 261
R R RP
Sbjct: 253 NDRNRLGERP 262
>gi|148686566|gb|EDL18513.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Mus
musculus]
Length = 626
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 199 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 258
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 259 AFNGVMFGDRPLKINHSNNAI 279
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 201 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 260
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 261 NGVMFGDRPLKINHSNNAI 279
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++DQ VTE+ L LF G V C+I + +S +AF+E+ + A+
Sbjct: 3 DEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYASHQSAQT 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL+ L + + + A +P N P+++ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
F + GE+ R++ D Q S AFV F A AE+AI +N G LGS IR +
Sbjct: 114 EAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMN--GQWLGSRSIRTN 170
Query: 249 PSKTPVRPRAPR 260
S +P APR
Sbjct: 171 WSTR--KPPAPR 180
>gi|328852755|gb|EGG01898.1| hypothetical protein MELLADRAFT_91734 [Melampsora larici-populina
98AG31]
Length = 1071
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 136
R T+YV++ + T+E + + F G++ D R S RF +V+FT + A++AL+
Sbjct: 719 RSTLYVTNFPEDATDEWIRSKFGEFGKIFDVRWPSKRFKSTRRFCYVQFTSPDSAQSALA 778
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T V PS+ ++ ++ + R +Y T + K V + D++ F
Sbjct: 779 LHNT-------EVAPSQKMSVFISDPLRKKARTDVGANDRELYITCLTKFVQEADLRKLF 831
Query: 197 ESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKT 252
+ G+++ +R+ L + HS AFVEF SA AAL+ + L I V+ S +
Sbjct: 832 QPF-GDIKGVRMILNEDGHSKGFAFVEFETEASAKAALSMNNVELKKRRIGVTISNS 887
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 85/211 (40%), Gaps = 25/211 (11%)
Query: 43 VLCLFNTAF---QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF 99
L L NT QK + + R RT D R +Y++ + + V E L LF
Sbjct: 776 ALALHNTEVAPSQKMSVFISDPLRKKARTDVGAND----RELYITCLTKFVQEADLRKLF 831
Query: 100 LTCGQVVDCR-ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA--- 155
G + R I + FAFVEF E A+AALS+ L + V S +
Sbjct: 832 QPFGDIKGVRMILNEDGHSKGFAFVEFETEASAKAALSMNNVELKKRRIGVTISNSKGTS 891
Query: 156 -IAPVNPTFLPRSE-----DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL 209
+ F S+ D+R C + + + + V + ++ FES G+V +
Sbjct: 892 LVGKNKGKFQAESKLSSAVDQRSRC---VKVSKLPEGVQEAIVQQAFESF-GKVLKTITY 947
Query: 210 GDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ Q A VEFA A+ A A A+L
Sbjct: 948 PEKQE----AVVEFANAQHAGAVFLHPEAIL 974
>gi|27369842|ref|NP_766180.1| splicing regulatory glutamine/lysine-rich protein 1 [Mus musculus]
gi|37537951|sp|Q8BZX4.1|SREK1_MOUSE RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|26329009|dbj|BAC28243.1| unnamed protein product [Mus musculus]
gi|47682645|gb|AAH70460.1| Splicing factor, arginine/serine-rich 12 [Mus musculus]
Length = 494
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 128
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 129 NGVMFGDRPLKINHS 143
>gi|149059244|gb|EDM10251.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Rattus
norvegicus]
Length = 494
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AAL T LG P L + V+P+ + + RT+Y N++ + T D
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI-------DEIRRTVYVGNLNSQTTTADQ 85
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 250
L F GEV+ +R+ GD TR AFVEFA S AL +G + G P++++ S
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 143
>gi|9910564|ref|NP_064477.1| splicing regulatory glutamine/lysine-rich protein 1 [Rattus
norvegicus]
gi|37537914|sp|Q9JKL7.1|SREK1_RAT RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=SR-related protein of 86 kDa; AltName:
Full=Serine/arginine-rich-splicing regulatory protein
86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|7158880|gb|AAF37578.1|AF234765_1 serine-arginine-rich splicing regulatory protein SRRP86 [Rattus
norvegicus]
Length = 494
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AAL T LG P L + V+P+ + + RT+Y N++ + T D
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI-------DEIRRTVYVGNLNSQTTTADQ 85
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 250
L F GEV+ +R+ GD TR AFVEFA S AL +G + G P++++ S
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 143
>gi|443735038|gb|ELU18893.1| hypothetical protein CAPTEDRAFT_226786 [Capitella teleta]
Length = 518
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 136
IRRT++V ++D T EQL F G+V R+ GD RFAFVEFT++ AL
Sbjct: 165 IRRTIFVGNLDSISTPEQLLQFFTQAGEVKYVRMAGDETLPTRFAFVEFTEQASLLKALV 224
Query: 137 LAGTMLGFYPVRVLPSKTAI 156
L G++ PVRV S AI
Sbjct: 225 LNGSLFSGRPVRVNHSNVAI 244
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RTI+ N+D T + FF + GEV+ +R+ GD TR AFVEF S + AL
Sbjct: 167 RTIFVGNLDSISTPEQLLQFF-TQAGEVKYVRMAGDETLPTRFAFVEFTEQASLLKALVL 225
Query: 236 SGAVLGSLPIRVSPS 250
+G++ P+RV+ S
Sbjct: 226 NGSLFSGRPVRVNHS 240
>gi|148686563|gb|EDL18510.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Mus
musculus]
Length = 519
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 94 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 153
Query: 236 SGAVLGSLPIRVSPS 250
+G + G P++++ S
Sbjct: 154 NGVMFGDRPLKINHS 168
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 21/193 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+E +T+YV ++D VTEE L TLF G V C+I + S+ FAF+E+ + + A+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRE-TSIDPFAFIEYANHQSAQT 61
Query: 134 ALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL+ + M +RV + +A P+++ + I+ ++ ++ +
Sbjct: 62 ALAAMNKRMFLKKEIRVNWATSA------GNQPKTDTSQH---HHIFVGDLSPEIDTETL 112
Query: 193 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 247
+ F + GE+ R++ D Q S AFV F A AE+AIA +N G LGS IR
Sbjct: 113 REAF-APFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMN--GQWLGSRSIRT 169
Query: 248 SPSKTPVRPRAPR 260
+ S +P APR
Sbjct: 170 NWSTR--KPPAPR 180
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 20/187 (10%)
Query: 63 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 119
R+N TS Q D ++V D+ ++ E L F G++ +CRI DP ++
Sbjct: 77 RVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKS 136
Query: 120 --FAFVEFTDEEGARAALS-LAGTMLGFYPVRV-LPSKTAIAP------VNPTFLPRSE- 168
+AFV F + A A++ + G LG +R ++ AP + P E
Sbjct: 137 RGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRENSKGIKSGKTPGFEE 196
Query: 169 --DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
+ + T+YC ++ + G + R+ D + AF+ FA
Sbjct: 197 IYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVFKDKGY----AFIRFASK 252
Query: 227 ESAIAAL 233
ESA A+
Sbjct: 253 ESAARAI 259
>gi|449278700|gb|EMC86491.1| Splicing factor, arginine/serine-rich 12 [Columba livia]
Length = 517
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++++ S +
Sbjct: 126 NGVMFGDRPLKINHSNNAI 144
>gi|326503120|dbj|BAJ99185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-GDPNSVLRFAFVEFTDEEGARAALSL 137
+T++V ++ V +++ F G+V D R D S FA VEF E A+ A L
Sbjct: 465 KTLFVGNLSYNVENDEVKQFFGEAGEVSDIRFATADDGSFKGFAHVEFATTEAAQKAYEL 524
Query: 138 AGTMLGFYPVRV--LPSKTAIAPV----NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
G L PVR+ + AI P N +F ++ S T + D + + +
Sbjct: 525 NGHDLSGRPVRLDFARERGAITPGSGRDNSSF------KKSGQSNTAFVRGFDSSLGEDE 578
Query: 192 IKLFFE---SVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
I+ + S CG + R+ + DY+ T IA+VEF S AL +G+ +G +
Sbjct: 579 IRSSLQEHFSSCGAIGRVSIPKDYETGTSKGIAYVEFTDGNSLPKALELNGSNIGEFSLF 638
Query: 247 VSPSKTPVRPRA 258
V +K PRA
Sbjct: 639 VDEAK----PRA 646
>gi|289740845|gb|ADD19170.1| polyadenylate-binding protein [Glossina morsitans morsitans]
Length = 321
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 138
+Y+ ++++ + + + F G +++C + D + R + FV+F EE ARAA+ +
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEKVN 189
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 196
G + V V+ ++PR + E+E + R +Y N ++ ++ ++K F
Sbjct: 190 GILCNSQKVHVV-----------KYIPRRDREQEKATQFRNLYVKNFNEDFSEQNMKEMF 238
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
E G + +++ D + S R FV F +SA+AA + +G LG
Sbjct: 239 EPY-GRITSHKIMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLG 284
>gi|194757405|ref|XP_001960955.1| GF11244 [Drosophila ananassae]
gi|190622253|gb|EDV37777.1| GF11244 [Drosophila ananassae]
Length = 307
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
R +Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 113 RKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDTEEAARAAIEK 172
Query: 138 AGTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKL 194
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++
Sbjct: 173 VNGMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLGEEFTEQHLRE 221
Query: 195 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
FE +L D S R FV + +SA+AA + G LG
Sbjct: 222 MFEPYGRITSHKLMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 63 RMNCRTS--NA-QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 119
++N TS NA +QD ++V D+ ++ L F G++ DCR+ DP ++
Sbjct: 67 KVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKS 126
Query: 120 --FAFVEFTDEEGARAALS-LAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDE----R 171
+ FV F + A A++ + G LG +R ++ AP + P S +E
Sbjct: 127 KGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQS 186
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
+ T+YC N+ + T+ ++ F G++Q +R+ D AF+ FA ESA
Sbjct: 187 SSTNCTVYCGNLAQGSTEEALQKIF-GPYGQIQEIRVFKD----KGYAFIRFASKESATQ 241
Query: 232 AL-NCSGAVLGSLPIRVSPSKTPVRP 256
A+ + L ++ S K P P
Sbjct: 242 AIVSVHNTDLNGQNVKCSWGKEPGEP 267
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 82 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 141
YV ++D VTEE + LF G V C+I +P + FVEF + A AAL+
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPGHE-PYCFVEFAEHHSAAAALAAMNKR 59
Query: 142 --LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
+G R + A +P N P+ + + I+ ++ ++ ++ F +
Sbjct: 60 NCMG----REMKVNWATSPGN---APKQDTSKHF---HIFVGDLSPEIETHTLRDAF-AA 108
Query: 200 CGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
GE+ R++ D Q S FV F + AE+AIA +N G LG+ IR + +
Sbjct: 109 FGEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMN--GQWLGTRAIRTNWATR-- 164
Query: 255 RPRAPR 260
+P AP+
Sbjct: 165 KPPAPK 170
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 19/166 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+DQ VT+ QL LF GQVV R+C D ++ L + +V +++++ A A+ +
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ + +++ +PT +R+ + I+ N+DK + DIK E
Sbjct: 101 ----LNFTPLNNKTIRVSVSRRDPT-------DRKSGAGNIFIKNLDKSI---DIKALHE 146
Query: 198 --SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D S FV++ E+A A++ +L
Sbjct: 147 TFSSFGTIISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKLNGML 192
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF 125
+T Q D+ +YV ++D + +E+L LF G + C++ DP+ + R + FV F
Sbjct: 310 QTVKEQVDKYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAF 369
Query: 126 -TDEEGARAALSLAGTMLGFYPVRV 149
T EE +RA + G M+ P+ V
Sbjct: 370 STPEEASRALGEMNGKMIVSKPLYV 394
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+E RT+YV ++D V+EE L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQ--CA 59
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
F GE+ R++ D Q S AFV F + AE+AIAA+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMN--GQWLGSRSIRTN 170
Query: 249 PS 250
S
Sbjct: 171 WS 172
>gi|432884719|ref|XP_004074556.1| PREDICTED: uncharacterized protein LOC101155617 [Oryzias latipes]
Length = 445
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G V R+ GD RFAFVEF +++ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARAL 222
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G M G P++V S AI
Sbjct: 223 TFNGVMFGDRPLKVNHSNNAI 243
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F G+V+ +R+ GD TR AFVEF +S AL
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARALTF 224
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G + G P++V+ S +
Sbjct: 225 NGVMFGDRPLKVNHSNNAI 243
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 63 RMNCRTSNAQQDEVIRR-TVYVSDIDQQVTEEQLATLFLTCG-QVVDCRICGDPNSVLR- 119
R+N ++ Q+++ ++V D+ +VT+ L F D R+ D +
Sbjct: 129 RVNWAYASGQREDTTDHFHIFVGDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSR 188
Query: 120 -FAFVEFTDEEGARAALS-LAGTMLGFYPVR--------------VLPSKTAIAPVNPTF 163
+ FV F +++ A++A++ L G LG +R + +I VN F
Sbjct: 189 GYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWATKGANSGEDQLASDSKSIVDVNNNF 248
Query: 164 LPRS-----ED--EREMCSRTIYCTNIDKKVTQGDIKLFFESV-CGEVQRLRLLGDYQHS 215
+ ED E RT+Y N+ +VTQ + FF ++ G ++ +R+ QH
Sbjct: 249 TENAKQKSNEDAPENNPLYRTVYVGNLAHEVTQDVLHRFFHALGAGAIEEVRV----QHG 304
Query: 216 TRIAFVEFA-MAESAIAALNCSGAVLGSLPIRVSPSKTPVRP 256
FV+++ AE+A+A +G +LG P++ S P P
Sbjct: 305 KGFGFVKYSNHAETALAIQTGNGRILGGKPVKCSWGNKPTPP 346
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSL 137
R+VYV +I QVTE L +F + G V C++ S + FV++ + A A L+L
Sbjct: 61 RSVYVGNIHVQVTEALLREVFQSAGSVDGCKLIRKEKS--SYGFVDYYERGSAALAILTL 118
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G + P+RV + + + ED + I+ ++ +VT + FF
Sbjct: 119 NGKQIFGQPIRVNWAYAS---------GQREDTTDHFH--IFVGDLSPEVTDSALFAFFS 167
Query: 198 SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIR 246
+ R++ D + S FV F + A +A+N +G LG+ IR
Sbjct: 168 AYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIR 219
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++ + + + + F G ++ CR+ D R + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQGNSRGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A A++ ML +V K F+PRSE ER M + +Y
Sbjct: 147 ETEEAANEAINKVNGML-LNEKKVFVGK---------FVPRSERERMMGDKARLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA---MAESAIAALN 234
N +++ G +K FE V G++ R++ D +R FV F AE A+ LN
Sbjct: 197 KNFGEELDDGKLKEMFE-VYGKITSARVMTDQTGKSRGFGFVSFENPDNAEQAVKELN 253
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+D VTE L F G V+ R+C D L +A+V F A AL
Sbjct: 12 SLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERALDT 71
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F P++ P + + +P+ R+ ++ N+ K + D K F+
Sbjct: 72 ----MNFEPLKNRPMRIMWSQRDPSL-------RKSGVGNVFIKNLHKDI---DNKAIFD 117
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + R+ D Q ++R FV F E+A A+N +L
Sbjct: 118 TFSAFGNILSCRVATDEQGNSRGYGFVHFETEEAANEAINKVNGML 163
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALS 136
+ V+V + +T E L F +CG++V R+ D F +V+F D GA+AAL
Sbjct: 288 KNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE 347
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE--DEREMCSRTIYCTNIDKKVTQGDIKL 194
+AGT L + V S P P+ + DE S+T++ N+ + TQ +
Sbjct: 348 MAGTELDGRTINVDLSAPRPPRDGPGATPKKQFNDELSAPSQTVFVGNLSFESTQDAVWE 407
Query: 195 FFESVCGEVQRLRLLGDYQHS--TRIAFVEFAMAESAIAALN 234
F S G V +R+ D + A+VEF +SA A++
Sbjct: 408 SF-SDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAVD 448
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+E RT+YV ++D V+EE L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQ--CA 59
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
F GE+ R++ D Q S AFV F + AE+AIAA+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMN--GQWLGSRSIRTN 170
Query: 249 PS 250
S
Sbjct: 171 WS 172
>gi|224112839|ref|XP_002316306.1| predicted protein [Populus trichocarpa]
gi|222865346|gb|EEF02477.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGAR 132
E I VYV I TE+ + + F CG + VDC D A + F E A+
Sbjct: 191 EDIADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAK 250
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL L G+ +G + +++ P KT P F P E +R IY N+ +T+ D+
Sbjct: 251 RALDLDGSDMGGFYLKIQPYKTTKVNKEPNFAPGI---VEGYNR-IYVGNLSWDITEDDL 306
Query: 193 KLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
K FF S C ++ +R D + V+F+ +S + AL ++ PI++S
Sbjct: 307 KKFF-SDC-KISSIRFGMDKETGEFRGYGHVDFSDNDSLVKALKLDQRIVCGRPIKIS 362
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+ + V + QL +F G VV R+C D NS L +A+V + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 198 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
+ C G + ++ D +R FV+F ESA +A++ +G ++ + V P
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGP 197
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTDEEGARAALS-L 137
+Y+ ++++ + +E+L LF G + C++ D N V R + FV F E A AL+ +
Sbjct: 318 NLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEM 377
Query: 138 AGTMLGFYPVRV 149
G M+G P+ V
Sbjct: 378 NGKMVGSKPLYV 389
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 9/177 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
VYV ++ VT+++L +F G + + D + R F FV F + + A+A L
Sbjct: 215 NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQEL 274
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-IYCTNIDKKVTQGDIK 193
G + Y R + F ++ E T +Y N+++ + ++
Sbjct: 275 NGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLR 334
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
F + G + +++ D +R FV F AE A AL +G ++GS P+ V+
Sbjct: 335 ELF-AEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVA 390
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+ + V + QL +F G VV R+C D NS L +A+V + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 198 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
+ C G + ++ D +R FV+F ESA +A++ +G ++ + V P
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGP 197
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTDEEGARAALS-L 137
+Y+ ++++ + +E+L LF G + C++ D N V R + FV F E A AL+ +
Sbjct: 318 NLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEM 377
Query: 138 AGTMLGFYPVRV 149
G M+G P+ V
Sbjct: 378 NGKMVGSKPLYV 389
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 9/177 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
VYV ++ VT+++L +F G + + D + R F FV F + + A+A L
Sbjct: 215 NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQEL 274
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-IYCTNIDKKVTQGDIK 193
G + Y R + F ++ E T +Y N+++ + ++
Sbjct: 275 NGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLR 334
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
F + G + +++ D +R FV F AE A AL +G ++GS P+ V+
Sbjct: 335 ELF-AEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVA 390
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 34/245 (13%)
Query: 39 SLIKVLCLFNTAFQKRNGYSQGKRRMNCRTSNA-----QQDEVIRRTVYVSDIDQQVTEE 93
S +VL + A G S R+N T +A +QD+ T++V D+ VT+
Sbjct: 110 SAERVLQTYQGAIMPNGGQS---YRLNWATFSAGERSSRQDDGPDHTIFVGDLAADVTDY 166
Query: 94 QLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYP 146
L F + +VV R+ G + FV F DE E RA + G + P
Sbjct: 167 LLQETFRARYNSVKGAKVVIDRLTGRSKG---YGFVRFADEGEQMRAMTEMQGVLCSTRP 223
Query: 147 VRVLPS------KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 200
+R+ P+ T A + + P + E + + TI+ N+D VT ++ F S
Sbjct: 224 MRIGPATNKNPAATTQAKASYSNTPGGQSENDPNNTTIFVGNLDPNVTDDHLRQVF-SQY 282
Query: 201 GEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPR 257
GE+ +++ R FV+F + AE AI LN G +LG +R+S +TP +
Sbjct: 283 GELVHVKIP----SGKRCGFVQFSDRSSAEEAIRVLN--GTLLGGQNVRLSWGRTPSNKQ 336
Query: 258 APRPP 262
+ P
Sbjct: 337 TQQDP 341
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 125
+N ++ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V +
Sbjct: 18 AANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNY 77
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
++ A AL + L F P+ P + + +P+ R+ S I+ N+DK
Sbjct: 78 SNPVDASRALDV----LNFTPLNGNPIRVMYSHRDPSV-------RKSGSGNIFIKNLDK 126
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSL 243
+ + F S G + ++ D S FV+F E+A+ A+ +G +L
Sbjct: 127 AIDHKALHDTF-SAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDK 185
Query: 244 PIRVSP 249
+ V P
Sbjct: 186 QVFVGP 191
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGA 131
D+ +YV ++D + +++L LF G + C++ DPN + R + FV F+ EE A
Sbjct: 306 DKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAA 365
Query: 132 RAALSLAGTMLGFYPVRV 149
RA + G M+ P+ V
Sbjct: 366 RALAEMNGRMIVSKPLYV 383
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 125
+N ++ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V +
Sbjct: 18 AANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNY 77
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
++ A AL + L F P+ P + + +P+ R+ S I+ N+DK
Sbjct: 78 SNPVDASRALDV----LNFTPLNGNPIRVMYSHRDPSV-------RKSGSGNIFIKNLDK 126
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSL 243
+ + F S G + ++ D S FV+F E+A+ A+ +G +L
Sbjct: 127 AIDHKALHDTF-SAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDK 185
Query: 244 PIRVSP 249
+ V P
Sbjct: 186 QVFVGP 191
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGA 131
D+ +YV ++D + +++L LF G + C++ DPN + R + FV F+ EE A
Sbjct: 306 DKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAA 365
Query: 132 RAALSLAGTMLGFYPVRV 149
RA + G M+ P+ V
Sbjct: 366 RALAEMNGRMIVSKPLYV 383
>gi|395324233|gb|EJF56678.1| RNA-binding protein Prp24 [Dichomitus squalens LYAD-421 SS1]
Length = 1028
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 136
+ T+YV++ ++ ++ + TLF G++ D R S RF +V+FT A AL
Sbjct: 690 KSTLYVTNFPEKADDKFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQFTSPTAAEHALE 749
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L GT L K ++ NP D + R +Y + K VT+ D++ F
Sbjct: 750 LNGTEL------EESHKMSVFISNPERRKERTDS-DADDREVYVAGLSKLVTKEDLENLF 802
Query: 197 ESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
++ G V+ +R+ L D S AFVEF A AAL + L + V+ + + VR
Sbjct: 803 KT-YGTVKDVRMILDDKGRSKGFAFVEFETENDARAALAANNHELKQRRMAVTLADSRVR 861
Query: 256 PRAPRP 261
+ P
Sbjct: 862 AKNKAP 867
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR-ICGDPNSVLRFA 121
R RT + D R VYV+ + + VT+E L LF T G V D R I D FA
Sbjct: 770 RRKERTDSDADD----REVYVAGLSKLVTKEDLENLFKTYGTVKDVRMILDDKGRSKGFA 825
Query: 122 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCT 181
FVEF E ARAAL+ L + V + + + N R+ E+ +R++
Sbjct: 826 FVEFETENDARAALAANNHELKQRRMAVTLADSRVRAKNKAPGYRA----EVRNRSVRVR 881
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGD 211
N+ +G ++ E V+R+ + D
Sbjct: 882 NLPPNTQEGLLQQALEK-HARVKRVEVFQD 910
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 139
TV+V+++ VTE++L TLF CG + + +I PNS++ A VEF D E AAL+
Sbjct: 618 TVFVAEMPAGVTEDELRTLFKDCGSIREIKITQLPNSLV--ATVEFMDRESVPAALTKDK 675
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
R+ + A+ T+Y TN +K I+ F
Sbjct: 676 K-------RIRGQEVAVHLA--------------WKSTLYVTNFPEKADDKFIRTLF-GK 713
Query: 200 CGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
GE+ +R ++ + R +V+F +A AL +G L
Sbjct: 714 YGEIFDVRWPSKKFKSTRRFCYVQFTSPTAAEHALELNGTEL 755
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 19/192 (9%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+E +T+YV ++DQ VTE+ L LF G V C+I + +S +AF+E+ + + A+
Sbjct: 3 EEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYANHQSAQT 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL+ L + + + A +P N P+++ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
F + GE+ R++ D Q S AFV F A AE+AI +N G LGS IR +
Sbjct: 114 EAF-APFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMN--GQWLGSRSIRTN 170
Query: 249 PSKTPVRPRAPR 260
S +P APR
Sbjct: 171 WSTR--KPPAPR 180
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 136
++YV D++ V++ QL LF GQVV R+C D S L +A+V F++ + ARA
Sbjct: 47 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALEV 106
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L +L P+RV+ S R R S I+ N+DK + + F
Sbjct: 107 LNFAVLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHETF 154
Query: 197 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 249
S + + + S FV++ E+A A+ +G ++ P+ V P
Sbjct: 155 SSFGTILSCKVAMDEAGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP 208
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRR +A D+ +Y+ ++D + ++QL LF G++ ++ D N + +
Sbjct: 311 KRRFEQSLKDAA-DKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSYKVMRDQNGLSKG 369
Query: 121 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 370 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAM 412
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 125
+ A + ++YV D++ VT+ QL LF GQVV R+C D S L + +V +
Sbjct: 14 NAGANNPNFVTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNY 73
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
++ + A AL ML F P+ P + + +PT R+ + I+ N+DK
Sbjct: 74 SNPQDAARALE----MLNFTPLNGSPIRVMYSHRDPTI-------RKSGAGNIFIKNLDK 122
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSL 243
+ + F S G + ++ D S FV+F E+A A+ +G +L
Sbjct: 123 AIDHKALHDTF-SAFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDK 181
Query: 244 PIRVSP 249
+ V P
Sbjct: 182 QVYVGP 187
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D + +E+L LF G + C++ DPN + R + FV F T EE +
Sbjct: 302 DKFQGANLYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEAS 361
Query: 132 RAALSLAGTMLGFYPVRV 149
RA L + G ++ P+ V
Sbjct: 362 RALLEMNGKIVVSKPLYV 379
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 125
A + ++YV D++ VT+ QL LF GQVV R+C D S L + +V +
Sbjct: 14 NGGANNPNFVTTSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNY 73
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
++ + A AL + L F PV P + + +P+ R+ + I+ N+DK
Sbjct: 74 SNPQDAARALEV----LNFTPVNGSPIRVMYSHRDPSV-------RKSGAGNIFIKNLDK 122
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSL 243
+ + F SV G + ++ D S FV+F E+A A+ +G +L
Sbjct: 123 AIDHKALHDTF-SVFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDK 181
Query: 244 PIRVSP 249
+ V P
Sbjct: 182 QVYVGP 187
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D + +E++ LF G + C++ DPN + R + FV F T EE +
Sbjct: 302 DKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEAS 361
Query: 132 RAALSLAGTMLGFYPVRV 149
RA L + G M+ P+ V
Sbjct: 362 RALLEMNGKMVASKPLYV 379
>gi|125811664|ref|XP_001361971.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|195171077|ref|XP_002026337.1| GL20391 [Drosophila persimilis]
gi|54637147|gb|EAL26550.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|194111239|gb|EDW33282.1| GL20391 [Drosophila persimilis]
Length = 296
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 139
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 104 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 163
Query: 140 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 196
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 164 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 212
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLGS 242
E G + +L+ D + S R FV F +SA+AA + G LG
Sbjct: 213 EPY-GRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGD 259
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 19/189 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+EE L LF T G V +C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 247
+ F + GE+ R++ D Q S AFV F A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 248 SPSKTPVRP 256
+ S + P
Sbjct: 169 NWSTRKLPP 177
>gi|405961668|gb|EKC27433.1| Putative splicing factor, arginine/serine-rich 7 [Crassostrea
gigas]
Length = 449
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
E IRRTVYV ++ + VT EQL + F G+V R+ GD + A+VEFTD+ A
Sbjct: 160 EEIRRTVYVGNLAKNVTTEQLLSFFSQVGEVKYVRMAGDEKQPTKNAYVEFTDQRSISTA 219
Query: 135 LSLAGTMLGFYPVRV 149
L+ G M P+ V
Sbjct: 220 LTYNGVMFQTLPISV 234
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 60/234 (25%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDE 128
+++ + + +++I T++Q+ TLF G++ +C++ + ++ + +V++ D
Sbjct: 3 EKITTKVIQITNIAPNATKDQMKTLFGYLGRIDECKMYPSNELPEGDTSTKVCYVKYDDS 62
Query: 129 EGARAALSLAGT------------MLGFYP-----VRVLPSKTA-IAPVNPTF------- 163
+ AL L T M G P +++ PS A + P P++
Sbjct: 63 VSSGIALHLTNTVFIDRALIIVPVMDGKIPDETTALQIAPSAIAGMIPGTPSWPSNVISQ 122
Query: 164 ---------------------------LPRSED--EREMCSRTIYCTNIDKKVTQGDIKL 194
LP + D + E RT+Y N+ K VT +
Sbjct: 123 MTGTGLTQMITTHDPKLTALGLLQYPPLPGNTDPAKIEEIRRTVYVGNLAKNVTTEQLLS 182
Query: 195 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
FF V GEV+ +R+ GD + T+ A+VEF S AL +G + +LPI V+
Sbjct: 183 FFSQV-GEVKYVRMAGDEKQPTKNAYVEFTDQRSISTALTYNGVMFQTLPISVT 235
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 38/203 (18%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-------------- 112
R S+ +Q + RT+YV ++ +++T + + LF G++ R+ G
Sbjct: 320 RLSSEEQAALDARTIYVGNVPKEMTVKTIKKLFRPFGEIDSIRVRGVVAEDSRMSAKVAT 379
Query: 113 -----DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPR 166
P + +V F +E+ A+ AL L G LG +RV L +K +
Sbjct: 380 ITKKMHPKVSTVYVYVAFKEEQSAKDALKLNGHKLGENTLRVDLSTKN-----------K 428
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH--STRIAFVEFA 224
D++ R ++ NI +T+ +++ F+S CG+++ +R++ D + S I +V F
Sbjct: 429 DHDQK----RAVFLGNIPFDITEDEVRKHFDS-CGKIESVRIVKDRKSGLSRGIGYVNFE 483
Query: 225 MAESAIAALNCSGAVLGSLPIRV 247
+S AL +G L + IRV
Sbjct: 484 NQDSVTLALELNGTNLKNREIRV 506
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 53 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 112
K NG+ G+ + S +D +R V++ +I +TE+++ F +CG++ RI
Sbjct: 408 KLNGHKLGENTLRVDLSTKNKDHDQKRAVFLGNIPFDITEDEVRKHFDSCGKIESVRIVK 467
Query: 113 DPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRV 149
D S L +V F +++ AL L GT L +RV
Sbjct: 468 DRKSGLSRGIGYVNFENQDSVTLALELNGTNLKNREIRV 506
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+ + V + QL +F G VV R+C D NS L +A+V + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 198 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
+ C G + ++ D +R FV+F ESA +A++ +G ++ + V P
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGP 197
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 26/192 (13%)
Query: 72 QQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 127
Q+D R+T ++V ++D ++ L ++F G ++ C++ G+ F FV+F
Sbjct: 94 QRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGTILSCKVAGENGRSKGFGFVQFES 153
Query: 128 EEGARAA-LSLAGTMLGFYPVRVLP-----SKTAIAPVNPTFLPRSEDEREMCSRTIYCT 181
++ A A +L TMLG + V +TA AP +Y
Sbjct: 154 QDSALVAQTALHDTMLGGKKLHVCKFVKKTERTAAAPCE-------------VFTNLYVK 200
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNC-SGAV 239
N+D+ +T+ +K F SV G+V + ++ D++ S FV F + A A++ +G+V
Sbjct: 201 NLDETITEDGLKDMF-SVVGDVSSVAIMMDHEGKSKHFGFVNFKSPDDAKKAVDVMNGSV 259
Query: 240 LGSLPIRVSPSK 251
+GS + V ++
Sbjct: 260 IGSKTLFVGKAQ 271
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 73 QDEVIRR--TVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVE-FTD 127
+ +V++R ++YV D+D +VTE L F G + R+ C L +A+V ++
Sbjct: 9 KQQVLQRGASLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYSH 68
Query: 128 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 187
+ +RA L T L P+R++ + R R+ ++ N+D +
Sbjct: 69 AQASRALGLLNHTNLKGKPMRIM------------WCQRDPFARKTGFANLFVKNLDFSI 116
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 232
+ ++ F S G + ++ G+ S FV+F +SA+ A
Sbjct: 117 SSSCLESIF-SKYGTILSCKVAGENGRSKGFGFVQFESQDSALVA 160
>gi|193704514|ref|XP_001944340.1| PREDICTED: hypothetical protein LOC100161931 [Acyrthosiphon pisum]
Length = 673
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 127
T ++++ E IRRT+ ++D+ VT+++L F G V R C N + R+A VE+++
Sbjct: 164 TYDSRRIEEIRRTLAAINVDENVTDDELIGFFQKAGDVKYVRWCSRENDITRYALVEYSE 223
Query: 128 EEGARAALSLAGTMLGFYPVRVLPSKTAIA 157
+ A L L G LG PV+V + AIA
Sbjct: 224 QASVIAGLKLNGVQLGSRPVQVTHATQAIA 253
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 164 LPRSEDER--EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFV 221
LP + D R E RT+ N+D+ VT ++ FF+ G+V+ +R TR A V
Sbjct: 161 LPITYDSRRIEEIRRTLAAINVDENVTDDELIGFFQK-AGDVKYVRWCSRENDITRYALV 219
Query: 222 EFAMAESAIAALNCSGAVLGSLPIRVS 248
E++ S IA L +G LGS P++V+
Sbjct: 220 EYSEQASVIAGLKLNGVQLGSRPVQVT 246
>gi|195121744|ref|XP_002005379.1| GI19109 [Drosophila mojavensis]
gi|193910447|gb|EDW09314.1| GI19109 [Drosophila mojavensis]
Length = 300
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 139
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 140 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 196
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 168 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 216
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
E G + +L+ D + S R FV F +SA+AA + G LG
Sbjct: 217 EPY-GRITSHKLMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLG 262
>gi|327263062|ref|XP_003216340.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Anolis carolinensis]
Length = 626
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 77 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 135
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 179 IRRTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 238
Query: 136 SLAGTMLGFYPVRVLPSKTAI 156
+ G + G P+++ S AI
Sbjct: 239 AFNGVVFGDRPLKINHSNNAI 259
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 181 RTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 240
Query: 236 SGAVLGSLPIRVSPSKTPV 254
+G V G P++++ S +
Sbjct: 241 NGVVFGDRPLKINHSNNAI 259
>gi|393212445|gb|EJC97945.1| hypothetical protein FOMMEDRAFT_97432 [Fomitiporia mediterranea
MF3/22]
Length = 1017
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 56 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP- 114
G ++ K+R+N + + + T+YV++ ++V + + LF G + D R
Sbjct: 660 GLTKDKKRINGQEISVHL--AWQSTLYVTNFPEKVDDAYIRQLFDQFGVIFDVRWPSKKF 717
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLG-FYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
+ RF +V+FT +E A+AALSL GT L P+ V S P + ER
Sbjct: 718 KATRRFCYVQFTSKEAAQAALSLHGTELEPGLPMNVFISN-----------PERKKERTD 766
Query: 174 C---SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 229
R +Y + K V + D+K F++ G V+ +R+ D + +AFVEF SA
Sbjct: 767 AGADDREVYVAGLSKFVIRDDLKKLFKTF-GPVKDIRVTKDDTGLCKGVAFVEFEDEPSA 825
Query: 230 IAALNCSGAVLGSLPIRVSPSKTPVRPR 257
AL + + + I V+ S + VR R
Sbjct: 826 QRALQANNHDVKNRRIAVTMSDSRVRAR 853
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 26/194 (13%)
Query: 56 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN 115
G S G ++ ++ + + TV+V+D+ TE+ L LF CG + + +I N
Sbjct: 584 GRSDGNKKAKMGSTPPLKRDRENSTVFVADLPSGATEDDLTALFKDCGDIREIKITSLAN 643
Query: 116 SVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 175
S R A +EF D E A L+ + + V +
Sbjct: 644 S--RVATIEFVDRESVPAGLTKDKKRINGQEISVHLA---------------------WQ 680
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALN 234
T+Y TN +KV I+ F+ G + +R ++ + R +V+F E+A AAL+
Sbjct: 681 STLYVTNFPEKVDDAYIRQLFDQF-GVIFDVRWPSKKFKATRRFCYVQFTSKEAAQAALS 739
Query: 235 CSGAVLG-SLPIRV 247
G L LP+ V
Sbjct: 740 LHGTELEPGLPMNV 753
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL+ L + + + A +P N P+++ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGNQ---PKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
F GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 113 EAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 248 SPSKTPVRPRAPRPP 262
+ S + P PR P
Sbjct: 169 NWSTRKLPP--PREP 181
>gi|195383760|ref|XP_002050594.1| GJ22239 [Drosophila virilis]
gi|194145391|gb|EDW61787.1| GJ22239 [Drosophila virilis]
Length = 301
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 139
+Y+ ++++ + + + F G +++C + D R + FV F EE ARAA+
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 140 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 196
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 169 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 217
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
E G + +L+ D + S R FV F +SA+AA + G LG
Sbjct: 218 EPY-GRITSHKLMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLG 263
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 134
+ ++YV D++ V+E QL LF GQVV R+C D L +A+V + + A A
Sbjct: 26 VSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRA 85
Query: 135 LSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L L ++L P+R++ F R R+ + I+ N+DK + +
Sbjct: 86 LELLNFSVLNGNPIRIM------------FSHRDPSIRKSGTANIFIKNLDKTIDNKALH 133
Query: 194 LFFESVCGEVQ-RLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
F + G + ++ + G Q S FV+F ESA+ A+ +G +L + V P
Sbjct: 134 DTFSAFGGILSCKVAVDGSGQ-SKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGP 190
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSL 137
+Y+ ++D V +E+L LF G + C++ DP R + FV F+ EE RA +
Sbjct: 311 NLYLKNLDDTVDDEKLRELFADYGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEM 370
Query: 138 AGTMLGFYPVRVLPS-----------------KTAIAPVNPTFLP 165
G M+G P+ V + +T+++P PT LP
Sbjct: 371 NGKMVGSKPLYVALAQRKEERRARLQAAFAQMRTSVSPAVPTSLP 415
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 9/177 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
VYV ++ + TE+ L +F G + + D + + F FV F + A+A +L
Sbjct: 208 NVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKSKCFGFVNFEHPDNAAKAVEAL 267
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
G +Y R A + F R E + +Y N+D V ++
Sbjct: 268 NGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEKLR 327
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
F G + +++ D Q +R FV F+ E A A+ +G ++GS P+ V+
Sbjct: 328 ELFAD-YGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMNGKMVGSKPLYVA 383
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQ--SA 59
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
F + GE+ R++ D Q S AFV F A AA+N +G LGS IR +
Sbjct: 114 EAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTN 170
>gi|195029531|ref|XP_001987626.1| GH22019 [Drosophila grimshawi]
gi|193903626|gb|EDW02493.1| GH22019 [Drosophila grimshawi]
Length = 304
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 139
+Y+ ++++ + + + F G +++C + D R + FV F EE ARAA+
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 140 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 196
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 172 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 220
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
E G + +L+ D + S R FV F +SA+AA + G LG
Sbjct: 221 EPY-GRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLG 266
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 20/179 (11%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T +++ ++D+Q+ + L F+ G V+ C++ D + +
Sbjct: 116 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQGRSKGY 175
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCS 175
FV + E A A+ ML + K + P +PR E DE +
Sbjct: 176 GFVHYETAEAAETAIKAVNGML------LNDKKVYVGP----HIPRKERQSKLDEMKAQF 225
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 234
+Y N+D +VTQ + + F + + D S FV + E A AA++
Sbjct: 226 TNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAVD 284
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 22/177 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE + +F G V R+C D L +A+V + + +G RA
Sbjct: 46 SLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERALEQ 105
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L +++ P R++ S+ R R+ I+ N+D+++ D K
Sbjct: 106 LNYSLIKGRPCRIMWSQ------------RDPALRKTGQGNIFIKNLDEQI---DNKALH 150
Query: 197 ESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 249
++ G V ++ D Q S FV + AE+A A+ +G +L + V P
Sbjct: 151 DTFVAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGP 207
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI----CGDPNSVLRFAFVEFTDEE 129
+E +T+YV ++D VTEE L TLF G V C+I DP +AF+E+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDP-----YAFIEYASHT 57
Query: 130 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 189
A+ A LA F+ + + A +P N P+++ + I+ ++ ++
Sbjct: 58 SAQTA--LAAMNKRFFLKKEIKVNWATSPGN---QPKTDTSQHYH---IFVGDLSPEIET 109
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLP 244
++ F + GE+ R++ D Q S AFV F A AE+AI +N G LGS
Sbjct: 110 ETLREAF-APFGEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMN--GQWLGSRS 166
Query: 245 IRVSPSKTPVRPRAPR 260
IR + S +P APR
Sbjct: 167 IRTNWSTR--KPPAPR 180
>gi|195429621|ref|XP_002062856.1| GK19472 [Drosophila willistoni]
gi|194158941|gb|EDW73842.1| GK19472 [Drosophila willistoni]
Length = 297
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 139
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 140 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 196
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 165 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 213
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
E G + +L+ D + S + FV F +SA+AA + G LG
Sbjct: 214 EPY-GRITSHKLMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLG 259
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
R V+V ++D+ + +QL +F G+V+ C++ D + V + + FV+F + A +
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 137 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
GT++ + V P F+ R + ++ +Y N+ + T D+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 196 FESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 240
F GE+ ++ D + S R FV F AE+A+ A+ V+
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVV 183
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 49 TAFQKRNGYSQGKRRMNC----RTSNAQQD--------EVIRR-------TVYVSDIDQQ 89
TA +K NG ++ ++ R +N +D ++IR +YV ++D
Sbjct: 174 TAIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDS 233
Query: 90 VTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLAGTMLGFYPV 147
V +L LF G + C++ N + + FVEF T EE ++A L + G M+G P+
Sbjct: 234 VDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPI 293
Query: 148 RV 149
V
Sbjct: 294 YV 295
>gi|19922904|ref|NP_611924.1| CG4612, isoform A [Drosophila melanogaster]
gi|386768569|ref|NP_001246493.1| CG4612, isoform C [Drosophila melanogaster]
gi|195353161|ref|XP_002043074.1| GM11822 [Drosophila sechellia]
gi|195586434|ref|XP_002082979.1| GD24944 [Drosophila simulans]
gi|7291799|gb|AAF47219.1| CG4612, isoform A [Drosophila melanogaster]
gi|16648374|gb|AAL25452.1| LD36772p [Drosophila melanogaster]
gi|194127162|gb|EDW49205.1| GM11822 [Drosophila sechellia]
gi|194194988|gb|EDX08564.1| GD24944 [Drosophila simulans]
gi|220946122|gb|ACL85604.1| CG4612-PA [synthetic construct]
gi|220955844|gb|ACL90465.1| CG4612-PA [synthetic construct]
gi|383302680|gb|AFH08246.1| CG4612, isoform C [Drosophila melanogaster]
Length = 307
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 139
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 140 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 196
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
E G + +L+ D + S R FV + +SA+AA + G LG
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 132
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V F++ + A
Sbjct: 27 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 86
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL + L F P+ P + + +P+ R+ I+ N+D+ + +
Sbjct: 87 RALDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDRAIDHKAL 135
Query: 193 KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
F S G + ++ D S FV+F ESA A+ +G +L + V P
Sbjct: 136 HDTF-STFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 193
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +YV ++D + +E+L LF G + C++ DPN + R + FV F T EE +
Sbjct: 308 DKYQGANLYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEAS 367
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
RA L + G M+ P+ V T R ED R
Sbjct: 368 RALLEMNGKMVVSKPLYV------------TLAQRKEDRR 395
>gi|195489681|ref|XP_002092839.1| GE11444 [Drosophila yakuba]
gi|194178940|gb|EDW92551.1| GE11444 [Drosophila yakuba]
Length = 307
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 139
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 140 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 196
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLGS 242
E G + +L+ D + S R FV + +SA+AA + G LG
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGD 270
>gi|303280195|ref|XP_003059390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459226|gb|EEH56522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 589
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%)
Query: 62 RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 121
R + A+ + RTVY +++ +TE+ LA F G V + G + RF
Sbjct: 279 REEREKQGGAEDTSDVARTVYAGNVNSSITEDMLADFFSVAGVVTYVKFAGSDFNPSRFG 338
Query: 122 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 156
FVEFTD+ A AA +L+GTML ++V S I
Sbjct: 339 FVEFTDKASAEAAKALSGTMLAEMTLKVKHSNNPI 373
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
+ED ++ RT+Y N++ +T+ + FF SV G V ++ G + +R FVEF
Sbjct: 288 AEDTSDVA-RTVYAGNVNSSITEDMLADFF-SVAGVVTYVKFAGSDFNPSRFGFVEFTDK 345
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPV 254
SA AA SG +L + ++V S P+
Sbjct: 346 ASAEAAKALSGTMLAEMTLKVKHSNNPI 373
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 13/183 (7%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 224 NDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKSEES 283
Query: 131 ARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 187
AAL L G L P+ V P+ K A P S + +Y NI +
Sbjct: 284 VAAALQLTGQKLLGIPIIVQPTEAEKNRQARTTSGHHPNS-----VPFHRLYVGNIHFSI 338
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPI 245
T+ D++ FE GE++ ++L D +R FV+F A +A AL +G L PI
Sbjct: 339 TETDLQHVFEPF-GELEFVQLQKDENGRSRGYGFVQFRDAANAREALEKMNGFDLAGRPI 397
Query: 246 RVS 248
RV
Sbjct: 398 RVG 400
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 132
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V F++ + A
Sbjct: 24 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 83
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL + L F P+ P + + +P+ R+ I+ N+D+ + +
Sbjct: 84 RALDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDRAIDHKAL 132
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
F S G + ++ D ++ FV+F ESA A+ +G +L + V P
Sbjct: 133 HDTF-STFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 190
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +YV ++D + +++L LF G + C++ DPN + R + FV F T +E +
Sbjct: 305 DKYQGANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEAS 364
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
RA L + G M+ P+ V T R ED R
Sbjct: 365 RALLEMNGKMVVSKPLYV------------TLAQRKEDRR 392
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 15/187 (8%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE 128
+Q E+ RR +YV +I + T E+LA +F CG V + D RFAFV +
Sbjct: 66 GKQKEIERR-LYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTV 124
Query: 129 EGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TIYCTNIDK 185
E A+AA+ + GT +G RV+ P++ + L R +E E +Y N+ K
Sbjct: 125 EDAQAAIEKMNGTEIGG---RVIKVNITEKPLDVSGLNRLTEEAEFIDSPYKVYVGNLAK 181
Query: 186 KVTQGDIKLFFES----VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLG 241
VT +K F + +V R+ G ++F A E+AI+A N VL
Sbjct: 182 AVTTETLKKKFAEKGNVLDAKVTRIPETGKSGGYGFVSFSSEADVEAAISAFN--NVVLE 239
Query: 242 SLPIRVS 248
P+RV+
Sbjct: 240 GKPMRVN 246
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D N + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML + K + F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIEKVNGML------LNGKKVYVG----RFIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEF---AMAESAIAALNCS 236
N + +T+ ++ FE G++ +++ D S FV F AE+A+ ALN
Sbjct: 197 KNFGEDLTEEQLRTMFEK-YGKITSYKIMSKDDGKSKGFGFVAFESPEAAETAVEALNGK 255
Query: 237 GAVLG 241
+ G
Sbjct: 256 EIIDG 260
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 35/190 (18%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
VYV + + +TEEQL T+F G++ +I D F FV F E A A
Sbjct: 193 NVYVKNFGEDLTEEQLRTMFEKYGKITSYKIMSKDDGKSKGFGFVAFESPEAAETA---- 248
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPR----SEDEREMCSR---------------TIY 179
V L K I P ++ R +E ++E+ R +Y
Sbjct: 249 --------VEALNGKEIID-GKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLY 299
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGA 238
N+D + ++ F S G + +++ + S FV F+ E A A+ +G
Sbjct: 300 VKNLDDTIDDERLRKEF-SPFGTITSAKVMMEDNRSKGFGFVCFSSPEEATKAVTEMNGR 358
Query: 239 VLGSLPIRVS 248
++GS P+ V+
Sbjct: 359 IVGSKPLYVA 368
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F T G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ ++ N+D+ + D K +
Sbjct: 72 MNFDLIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDRSI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ S G + ++ D +++ FV F E+A ++ +L
Sbjct: 117 DTFSAFGNILSCKVAQDENGTSKGYGFVHFETEEAANKSIEKVNGML 163
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D V + QL +F G VV R+C D N+ L +A+V ++ A AL
Sbjct: 41 SLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALE- 99
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 100 ---MLNFTPINGKPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 146
Query: 198 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
+ C G + ++ D ++ FV++ E+A AA++ +G ++ + V P
Sbjct: 147 TFCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGP 202
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D V +++L LF G + C++ D N V R + FV F + E+ +
Sbjct: 317 DKYQNTNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDAS 376
Query: 132 RAALSLAGTMLGFYPVRV 149
RA + M+G P+ V
Sbjct: 377 RALAEMNSKMVGSKPLYV 394
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 11/183 (6%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC--GDPNSVLRFAFVEF-TDEEGA 131
+V VYV ++ + TE+ L +F G + + GD S F FV F + ++ A
Sbjct: 215 QVKFNNVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKC-FGFVNFESPDDAA 273
Query: 132 RAALSLAGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-IYCTNIDKKV 187
+A L G +Y R + F ++ + T +Y N+D V
Sbjct: 274 QAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSV 333
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPI 245
++ F + G + +++ D +R FV F AE A AL + ++GS P+
Sbjct: 334 DDDKLRELF-AEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPL 392
Query: 246 RVS 248
V+
Sbjct: 393 YVA 395
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 136
++YV D++ V++ QL LF GQVV R+C D S L +A+V F + + ARA
Sbjct: 41 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEV 100
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L P+RV+ S R R S I+ N+DK + + F
Sbjct: 101 LNFAPLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKMIDNKSLHETF 148
Query: 197 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 249
S + + + S FV++ E+A A+ +G ++ P+ V P
Sbjct: 149 SSFGTILSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP 202
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D + ++QL LF G++ C++ D N + + + FV F T EE ++A +
Sbjct: 323 NLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEM 382
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
G M+ P+ V F R ED + M
Sbjct: 383 NGKMISGKPLYV------------AFAQRKEDRKAM 406
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
D+ + RT+YV ++D+QVTE + LF G C++ + + FVEF + A A
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFVEHSHAAA 68
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL TM G R++ K VN P S + ++ ++ +V D+K
Sbjct: 69 ALQ---TMNG----RMILGKE--VKVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLK 119
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
F + G++ R++ D Q S FV F AE+AI +N G L IR +
Sbjct: 120 AAF-APFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMN--GQWLSGRAIRTN 176
Query: 249 -PSKTPVRPRAPR 260
++ P PR P
Sbjct: 177 WATRKPPPPRQPE 189
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 15/198 (7%)
Query: 69 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFT 126
S+ ++D V+V D+ +V L F GQ+ D R+ D N + FV F
Sbjct: 92 SSMKKDTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFL 151
Query: 127 DEEGARAAL-SLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPR-SEDE----REMCSRTIY 179
++ A A+ + G L +R ++ P P + S D+ + T+Y
Sbjct: 152 NKVDAENAIQGMNGQWLSGRAIRTNWATRKPPPPRQPETTKQLSYDDVCNSSSYTNTTVY 211
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGA 238
+ +T+G ++ F S G +Q +R+ D AF+ F ESA A+ + +G+
Sbjct: 212 IGGVTTGLTEGKMRETF-SHYGHIQEVRIFPD----KGYAFIRFMTHESAAHAIVSVNGS 266
Query: 239 VLGSLPIRVSPSKTPVRP 256
+ ++ S K P
Sbjct: 267 QINGHMVKCSWGKESSDP 284
>gi|194886456|ref|XP_001976617.1| GG19920 [Drosophila erecta]
gi|190659804|gb|EDV57017.1| GG19920 [Drosophila erecta]
Length = 307
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 139
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 140 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 196
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
E G + +L+ D + S R FV + +SA+AA + G LG
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|19113513|ref|NP_596721.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74698432|sp|Q9USY2.1|YOW4_SCHPO RecName: Full=Uncharacterized RNA-binding protein C1861.04c
gi|5734577|emb|CAB52740.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe]
Length = 1014
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLAG 139
+YV++ E + LF G VVD R N+ RF +V+ + A AL L
Sbjct: 668 LYVTNFPPTYDELDITKLFSAYGNVVDVRFPSLRYNTNRRFCYVQMRKPDEAHNALQLHK 727
Query: 140 TMLG-FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
+L YP++V S P+ T PRS E R +Y TNID KV + D++ FF
Sbjct: 728 KLLEEKYPIQVFISD----PLRRT--PRSGAVYE--GRELYVTNIDFKVNEKDVETFFRD 779
Query: 199 VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
G+V+ +R+ + +V + A AL+ +G LG+ + V SK
Sbjct: 780 Y-GQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSAAGKQLGNRVLNVVLSK 831
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 26/184 (14%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 138
R +YV++ID +V E+ + T F GQV RI N F +V T + A ALS A
Sbjct: 757 RELYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSAA 816
Query: 139 GTMLGFYPVRVLPS-------KTAIAPVNPTFLPRSEDERE-------------MCSRTI 178
G LG + V+ S KT ++ + L +S + E + S+++
Sbjct: 817 GKQLGNRVLNVVLSKPRESLEKTRVSSNDNRTLAKSFETTESNKMSTPKKSFEQIKSKSL 876
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA-MAESAIAALNCSG 237
TN+D V + ++ FES G++ R+ L +++ A VEF + ++ A+L G
Sbjct: 877 GVTNVDGTVNEARLRSLFESY-GKLYRVVLHPEHEG----AVVEFLDIHDAGKASLALEG 931
Query: 238 AVLG 241
+G
Sbjct: 932 HEIG 935
Score = 42.0 bits (97), Expect = 0.26, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 227
E R T+ TN+ +++ ++K+FF+ CG + R+ +L D Q ++A +EF+
Sbjct: 582 EQHRNREELTVLVTNLPSDISENELKIFFKD-CGNIIRIFILEDNQKDVKVAQIEFSETS 640
Query: 228 SAIAA 232
+AA
Sbjct: 641 EVLAA 645
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + +V +++ + A AL L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ + I+ N+DK + + F
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHDTF- 126
Query: 198 SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D S FV+F ESA A++ +L
Sbjct: 127 SAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGML 170
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+ +D IR++ +++ ++D+ + + L F G ++ C+I DP+ + + FV+F
Sbjct: 94 SHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQF 153
Query: 126 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCT 181
+EE A+ A+ L G ++ V V FL + E E + +Y
Sbjct: 154 DNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFNNVYVK 202
Query: 182 NIDKKVTQGDIKLFF 196
N+ + T+ D+K F
Sbjct: 203 NLSESTTEEDLKNIF 217
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D + +++L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 301 NLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEM 360
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 361 NGKMVVSKPLYV 372
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + +V +++ + A AL L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ + I+ N+DK + + F
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHDTF- 126
Query: 198 SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D S FV+F ESA A++ +L
Sbjct: 127 SAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGML 170
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+ +D IR++ +++ ++D+ + + L F G ++ C+I DP+ + + FV+F
Sbjct: 94 SHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQF 153
Query: 126 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCT 181
+EE A+ A+ L G ++ V V FL + E E + +Y
Sbjct: 154 DNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFNNVYVK 202
Query: 182 NIDKKVTQGDIKLFF 196
N+ + T+ D+K F
Sbjct: 203 NLSESTTEEDLKNIF 217
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D + +++L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 301 NLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEM 360
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 361 NGKMVVSKPLYV 372
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D VT+ QL LF QVV R+C D + L + +V +TD E A AL +
Sbjct: 170 SLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAARALDV 229
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ + I+ N+DK + + F
Sbjct: 230 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKGIDHKALHDTF- 277
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
S G + ++ D ++ FV+F E+A A++ +G +L + V P
Sbjct: 278 SAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGP 331
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGA 131
D+ +Y+ ++D + +++L LF G + C++ DPN + R + FV F+ EE +
Sbjct: 446 DKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEAS 505
Query: 132 RAALSLAGTMLGFYPVRV 149
RA + M+ P+ V
Sbjct: 506 RALAEMNSKMVVSKPLYV 523
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 131
++ + +VYV D++ V+E QL +F G VV R+C D L +A+V + + A
Sbjct: 19 NQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDA 78
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
AL L L F PV P + + +P+ R+ + I+ N+DK +
Sbjct: 79 TRALEL----LNFTPVNGKPIRIMFSHRDPSL-------RKSGAANIFIKNLDKAIDNKA 127
Query: 192 IKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
+ F S G + ++ D S FV+F ESA +A+ +G +L + V P
Sbjct: 128 LHDTF-SAFGGILSCKVATDSSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGP 186
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D V +E+L LF G + C++ DP R + FV F T EE RA +
Sbjct: 307 NLYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEM 366
Query: 138 AGTMLGFYPVRVLPS-----------------KTAIAPVNPTFLP 165
M+G P+ V + +T + P PT LP
Sbjct: 367 NTKMVGSKPLYVALAQRKEERRVRLQAAFAQMRTPVGPTVPTSLP 411
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 35/243 (14%)
Query: 42 KVLCLFNTAFQKRNGYSQGKRRMNCRTSNA----QQDEVIRRTVYVSDIDQQVTEEQLAT 97
++L +N A G S R+N T +A + D+ T++V D+ VT+ L
Sbjct: 122 RILQTYNGAIMPNGGQS---FRLNWATFSAGERSRHDDSPDYTIFVGDLAADVTDYLLQE 178
Query: 98 LF------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVL 150
F + +VV R+ G + FV F+DE E RA + G + P+R+
Sbjct: 179 TFRARYNSVKGAKVVIDRLTG---RTKGYGFVRFSDESEQVRAMTEMQGVLCSTRPMRIG 235
Query: 151 P--SKTAIAPVNP-----TFLPR-SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 202
P +KT P P+ S++E + + TI+ N+D VT ++ F S GE
Sbjct: 236 PASNKTPTTQSQPKASYQNSQPQGSQNENDPNNTTIFVGNLDPNVTDDHLRQVF-SQYGE 294
Query: 203 VQRLRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
+ +++ R FV+FA AE A+ LN G +LG +R+S ++P +A
Sbjct: 295 LVHVKIPA----GKRCGFVQFADRSCAEEALRVLN--GTLLGGQNVRLSWGRSPSNKQAQ 348
Query: 260 RPP 262
P
Sbjct: 349 ADP 351
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 24/199 (12%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 131
DEV RT+++ D+ + E L T F G+V ++ + + + F+EF GA
Sbjct: 63 DEV--RTLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGA 120
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVT- 188
L Y ++P+ +N E R S TI+ ++ VT
Sbjct: 121 ERILQT-------YNGAIMPNGGQSFRLNWATFSAGERSRHDDSPDYTIFVGDLAADVTD 173
Query: 189 ---QGDIKLFFESVCG-EVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSL 243
Q + + SV G +V RL G + FV F+ + A+ G + +
Sbjct: 174 YLLQETFRARYNSVKGAKVVIDRLTG---RTKGYGFVRFSDESEQVRAMTEMQGVLCSTR 230
Query: 244 PIRVSP--SKTPVRPRAPR 260
P+R+ P +KTP P+
Sbjct: 231 PMRIGPASNKTPTTQSQPK 249
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 125
+S++Q+D +TV+V + V + LA F CG+VV R+ D N+ F FVEF
Sbjct: 313 SSDSQEDS---KTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEF 369
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-EDEREMCSRTIYCTNID 184
EGA AA++L G V KT+ P +P ++ D S ++ N+
Sbjct: 370 ATAEGANAAVALNGQKE-IDGRAVNLDKTSAKPADPERRAKAFGDSTSAPSSVLFVGNVS 428
Query: 185 KKVTQGDI-KLFFESVCGEVQRLRLLG--DYQHSTRIAFVEFAMAESAIAALNCS-GAVL 240
+T+ + ++F E GEV+ +RL D Q +VEF ESA A + G +
Sbjct: 429 FDMTEDGLWEVFAE--YGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEGARGMDV 486
Query: 241 GSLPIRV 247
G IR+
Sbjct: 487 GGRTIRL 493
>gi|340714141|ref|XP_003395590.1| PREDICTED: hypothetical protein LOC100644519 [Bombus terrestris]
Length = 628
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 35/193 (18%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR------------------- 119
RT++V ++ + VT++QL LF G++ R+ G + L
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNDLHPKMKSV 401
Query: 120 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
+A++ F EE + ALS+ GT VRV S +S D+ E ++++
Sbjct: 402 YAYIRFESEESTKKALSINGTKFEGNYVRVDMS------------TKSNDKYE-TKKSVF 448
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSG 237
N+ V ++ F+ CGE+Q +R++ D Q F V F ++ AL G
Sbjct: 449 IGNLHFNVDDDSVRNHFKR-CGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALELDG 507
Query: 238 AVLGSLPIRVSPS 250
+ + +RV P+
Sbjct: 508 TTILNREVRVKPN 520
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F + GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 247 VSPSKTPVRPRAPRPP 262
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 131
Q ++ RT+YV ++D VTEE L +F GQV C+I +P + + FVEF+D + A
Sbjct: 6 QGNDCQPRTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGND-PYCFVEFSDHQSA 64
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
+AL L F + + A +P N L S+ I+ ++ ++
Sbjct: 65 ASALLAMNKRLCF--GKEMKVNWATSPGNTPKLDTSKHHH------IFVGDLSPEIETTQ 116
Query: 192 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 246
++ F G++ R++ D Q S FV F A AE+AI +N G LGS IR
Sbjct: 117 LRDAFAPF-GDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMN--GQWLGSRAIR 173
Query: 247 VS 248
+
Sbjct: 174 TN 175
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F + GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 247 VSPSKTPVRPRAPRPP 262
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F + GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 247 VSPSKTPVRPRAPRPP 262
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+T A+ +E VY+ ++D V E+ L F G++V I D N + + +AFV F
Sbjct: 190 KTDRAKAEEKYT-NVYMKNLDADVNEDLLREKFSEFGKIVSLAIAKDENGLCKGYAFVNF 248
Query: 126 TDEEGAR-AALSLAGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TIY 179
E AR AA ++ GT G Y R + F + E E+ M ++ IY
Sbjct: 249 DKPEDARWAAETMNGTRFGSKCLYVGRAQKKAEREQLLREQFKEKHE-EQMMKAKVSNIY 307
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC-SG 237
NI+ VT+ +++ F S CG + +L+ D + ++ FV F+ E AI A+ G
Sbjct: 308 VKNINVGVTEEELRKHF-SQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHG 366
Query: 238 AVLGSLPIRVSPSK 251
+ P+ V+ ++
Sbjct: 367 KMFHGKPLYVATAQ 380
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 45 CLFNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 104
CL+ QK+ Q R Q + +YV +I+ VTEE+L F CG
Sbjct: 270 CLYVGRAQKKAEREQLLREQFKEKHEEQMMKAKVSNIYVKNINVGVTEEELRKHFSQCGT 329
Query: 105 VVDCRI-CGDPNSVLRFAFVEF-TDEEGARAALSLAGTMLGFYPVRV 149
+ ++ C + F FV F T EE A + G M P+ V
Sbjct: 330 ITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGKMFHGKPLYV 376
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 23/196 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGND-PYAFIEYSTYQAATT 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLDKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F + GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAITAMN--GQWIGSRSIR 167
Query: 247 VSPSKTPVRPRAPRPP 262
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 35/239 (14%)
Query: 42 KVLCLFNTAFQKRNGYSQGKRRMNCRTSNA----QQDEVIRRTVYVSDIDQQVTEEQLAT 97
++L +N A G S R+N T +A +QD+ T++V D+ VT+ L
Sbjct: 123 RILQTYNGAIMPNGGQS---FRLNWATFSAGERSRQDDSPDYTIFVGDLAADVTDYLLQE 179
Query: 98 LF------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVL 150
F + +VV R+ G + FV F++E E RA + G + P+R+
Sbjct: 180 TFRARYNSVKGAKVVIDRLTG---RTKGYGFVRFSEESEQMRAMTEMQGVLCSTRPMRIG 236
Query: 151 P--SKTAIAPVNP--TFL---PR-SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 202
P +KT P ++L P+ S++E + + TI+ N+D VT ++ F S GE
Sbjct: 237 PASNKTPATQSQPKASYLNSQPQGSQNENDPNNTTIFVGNLDPNVTDDHLRQVF-SQYGE 295
Query: 203 VQRLRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA 258
+ +++ R FV+FA AE A+ LN G +LG +R+S ++P +A
Sbjct: 296 LVHVKIPA----GKRCGFVQFADRSCAEEALRVLN--GTLLGGQNVRLSWGRSPSNKQA 348
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 24/202 (11%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDE 128
A DEV RT+++ D+ + E L T F G+V ++ + + + F+EF
Sbjct: 61 ASADEV--RTLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTSQSEGYGFIEFNSR 118
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKK 186
GA L Y ++P+ +N E R+ S TI+ ++
Sbjct: 119 AGAERILQT-------YNGAIMPNGGQSFRLNWATFSAGERSRQDDSPDYTIFVGDLAAD 171
Query: 187 VT----QGDIKLFFESVCG-EVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVL 240
VT Q + + SV G +V RL G + FV F+ + A+ G +
Sbjct: 172 VTDYLLQETFRARYNSVKGAKVVIDRLTG---RTKGYGFVRFSEESEQMRAMTEMQGVLC 228
Query: 241 GSLPIRVSP--SKTPVRPRAPR 260
+ P+R+ P +KTP P+
Sbjct: 229 STRPMRIGPASNKTPATQSQPK 250
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius multifiliis]
Length = 267
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 24/176 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 137
T+YV IDQ+VT+E L LF CG VV+ + D + FVEF EE A ++ +
Sbjct: 13 TIYVGGIDQKVTQEVLWELFSQCGIVVNVHLPKDKITGEHQGYGFVEFKSEEDADYSIKI 72
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKL 194
++ Y P++V + S+D+R + I+ N+D+ +T+ +
Sbjct: 73 M-HLVKLYGKPIKVNKA--------------SQDKRTQEVGANIFIGNLDQSITEQQLHD 117
Query: 195 FFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRV 247
F S G + R++ D S AFV + E+A AA+N +G GS I V
Sbjct: 118 TF-SQFGLIISRRIVRDPDNDESKGYAFVSYDNFEAADAAINTMNGQFFGSKKINV 172
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 36 YFLSLIKVLCLFNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 95
Y + ++ ++ L+ K N SQ KR + + +++ ++DQ +TE+QL
Sbjct: 68 YSIKIMHLVKLYGKPI-KVNKASQDKRT-----------QEVGANIFIGNLDQSITEQQL 115
Query: 96 ATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRV 149
F G ++ RI DP++ +AFV + + E A AA+ ++ G G + V
Sbjct: 116 HDTFSQFGLIISRRIVRDPDNDESKGYAFVSYDNFEAADAAINTMNGQFFGSKKINV 172
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
SV G + ++ + ++ FV+F + E+A A++ +G +L + V P
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGP 201
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 10/188 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
VYV ++ + TE+ L +F G + + + + R F FV F + ++ ARA L
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDL 278
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-IYCTNIDKKVTQGD-I 192
G +Y R + F ++ + T +Y N+D + + +
Sbjct: 279 NGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKL 338
Query: 193 KLFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPS 250
K F G + +++ D S FV F AE A AL +G ++GS P+ V+ +
Sbjct: 339 KEIFADF-GTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALA 397
Query: 251 KTPVRPRA 258
+ RA
Sbjct: 398 QRKEERRA 405
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE- 101
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F PV P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 148
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
S G + ++ + ++ FV++ ESA A+N +G +L + V P
Sbjct: 149 TFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 204
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 80 TVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALS 136
+Y+ ++D V + E+L LF G + C++ D N V + + FV F + E+ RA ++
Sbjct: 325 NLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVA 384
Query: 137 LAGTMLGFYPVRV 149
+ G M+G P+ V
Sbjct: 385 MNGKMVGSKPLYV 397
>gi|392558318|gb|EIW51507.1| RNA-binding protein Prp24 [Trametes versicolor FP-101664 SS1]
Length = 1049
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 10/186 (5%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 136
R T+YV++ + + + TLF G++ D R S RF +V++T A AL
Sbjct: 710 RSTLYVTNFPEDADDTFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQYTSPTSAENALE 769
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L GT + + ++ NP D + R IY + K VT+ D++ F
Sbjct: 770 LNGTDM------EEGRRLSVYISNPERRKERTDS-DANEREIYIAGLSKLVTKEDLETLF 822
Query: 197 ESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
++ G V+ +R+ L D S AF+EF A AAL + L + V+ + + V+
Sbjct: 823 KTY-GNVKDVRMILDDKGKSKGFAFIEFTTEPEARAALAANNHELKKRRMAVTLADSRVK 881
Query: 256 PRAPRP 261
P+ P
Sbjct: 882 PKNKAP 887
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 58 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR-ICGDPNS 116
S +RR S+A + R +Y++ + + VT+E L TLF T G V D R I D
Sbjct: 786 SNPERRKERTDSDANE-----REIYIAGLSKLVTKEDLETLFKTYGNVKDVRMILDDKGK 840
Query: 117 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 176
FAF+EFT E ARAAL+ L + V + + + P N R E+ +R
Sbjct: 841 SKGFAFIEFTTEPEARAALAANNHELKKRRMAVTLADSRVKPKNKAPGYRE----EVRNR 896
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 211
++ N+ +G ++ E +++R+ + D
Sbjct: 897 SVRVKNLPPNTQEGLLQQALEK-HAKIKRVEVFAD 930
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 139
TV+V D+ V +E+L LF CG + + +I PNS++ A VEF + + AAL+
Sbjct: 638 TVFVGDLPAGVEDEELRALFKDCGVIREVKITQLPNSLV--ATVEFLERDSVPAALTKDK 695
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
RV + A+ RS T+Y TN + I+ F
Sbjct: 696 K-------RVRGKEIAV-----HLAWRS---------TLYVTNFPEDADDTFIRTLF-GK 733
Query: 200 CGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSG 237
GE+ +R ++ + R +V++ SA AL +G
Sbjct: 734 YGEIFDVRWPSKKFKSTRRFCYVQYTSPTSAENALELNG 772
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 76 VIRRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDE 128
V R +V+V D +D EE + LF + VV ++C D L + +V F D
Sbjct: 5 VQRTSVFVGDLPVDLPRPEEAINNLFSSIAPVVSVKVCRDIATQRSLGYGYVNFQTTADA 64
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E AL+ G G Y +RV+ F R +R+ + I+ +D V+
Sbjct: 65 EKVIDALNFTGIAPGRY-IRVM------------FAIRDPLQRKSGANNIFVKKLDAAVS 111
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
++ F S CG V ++ D + HS FV+F A+ A AAL+ +GA +G + V
Sbjct: 112 AKALQAAF-SRCGRVLSCKVALDSEGHSKGYGFVQFETADGAKAALDMNGAKVGDSEVEV 170
Query: 248 SP 249
+P
Sbjct: 171 AP 172
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 135
R +YV + +T+++L +F G++ C I + N LR FAFV F D++ A AA+
Sbjct: 289 RNLYVKHLPDDITDDKLREIFAPFGKITSCAIMRESNGSLRGFAFVCFEDKQHATAAM 346
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A A+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME- 101
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F PV P + + +P+ R+ + I+ N+DK + D K F+
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALFD 148
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
S G + ++ + ++ FV++ ESA A+N +G +L + V P
Sbjct: 149 TFSAFGTILSCKVATEISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 204
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 80 TVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALS 136
+Y+ ++D V + E+L LF G + C++ D N V + + FV F + E+ +RA ++
Sbjct: 325 NLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVA 384
Query: 137 LAGTMLGFYPVRV 149
+ G M+G P+ V
Sbjct: 385 MNGKMVGSKPLYV 397
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 134
+ ++YV D+D VT+ QL +F GQVV R+C D + L + +V +++ + A A
Sbjct: 27 VTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARA 86
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
L + L F P+ P + + +P+ R+ + I+ N+DK + +
Sbjct: 87 LDV----LNFTPLNGKPIRVMYSHRDPSI-------RKSGAGNIFIKNLDKAIDHKALHD 135
Query: 195 FFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
F S G + ++ L S FV+F ESA+ A+ +G +L + V P
Sbjct: 136 TF-SAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGP 191
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D + +++L LF G + C++ DPN + R + FV F T +E +
Sbjct: 306 DKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEAS 365
Query: 132 RAALSLAGTMLGFYPVRV 149
RA + + G M+ P+ V
Sbjct: 366 RALVEMNGKMVVSKPLYV 383
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 75 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDP-YAFVEFTNHQC--A 131
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 132 ATALAAMNKRSFLEKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 185
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPS 250
F + GE+ R++ D Q S AFV F A AA+N +G LGS IR + S
Sbjct: 186 EAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWS 244
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 22/187 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 131
DE RRTV+V + ++ +L F G V + +I D N +VEF +EE
Sbjct: 189 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 248
Query: 132 RAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 183
AAL L G L PV V P+ + + + +P +P +Y NI
Sbjct: 249 AAALQLTGQKLLGIPVIVQPTEAEKNRQARNSESSGHPNSIP---------FHRLYVGNI 299
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLG 241
+T+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 300 HFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDASQAREALEKMNGFDLA 358
Query: 242 SLPIRVS 248
PIRV
Sbjct: 359 GRPIRVG 365
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 50 AFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 109
A +K +G + T +++ +E ++YV D+D VTE L +F GQV R
Sbjct: 31 ASEKADGAKSEEAENGKDTKDSKDNEQTFASLYVGDLDPSVTESDLYEIFSKVGQVSSIR 90
Query: 110 ICGDP--NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
+C B L +A+V + E A AL L F ++ + + +P+
Sbjct: 91 VCRBAVTKKSLCYAYVNYQKREEAEHALDT----LAFCDIKGKQCRIMWSQRDPSM---- 142
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGD-YQHSTRIAFVEFA 224
R+ + ++ N+ + D K ++ S G++ ++ D + HS FV +
Sbjct: 143 ---RKKGTGNVFIKNLHPDI---DNKTLYDTFSTFGKILSCKIATDEHGHSKGFGFVHYD 196
Query: 225 MAESAIAAL-NCSGAVLGSLPIRVSP 249
AESA AA+ N +G +L ++ + V+P
Sbjct: 197 DAESAKAAIENVNGMLLNNMEVYVAP 222
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLDKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F + GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 247 VSPSKTPVRPRAPRPP 262
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
SV G + ++ + ++ FV+F + E+A A++ +G +L + V P
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGP 201
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 10/178 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
VYV ++ + TE+ L +F G + + + + R F FV F + ++ ARA L
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDL 278
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-IYCTNIDKKVTQGD-I 192
G +Y R + F ++ + T +Y N+D + + +
Sbjct: 279 NGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKL 338
Query: 193 KLFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
K F G + +++ D S FV F AE A AL +G ++GS P+ V+
Sbjct: 339 KEIFADF-GTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVA 395
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 132
QD RT+YV ++D VTE+ + LF GQ+ C+I +P S + FVEF + A
Sbjct: 7 QDGGQPRTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSDP-YCFVEFVNHSDAS 65
Query: 133 AALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
+A++ + M +RV + +AI P S+ I+ ++ ++ D
Sbjct: 66 SAITAMNARMCLGRELRVNWASSAIQQQTPHRPDTSKHHH------IFVGDLSPQIETSD 119
Query: 192 IKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
++ F S GE+ R++ D Q S FV F + A A++ G+ LGS IR +
Sbjct: 120 LREAF-SPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTN 178
Query: 249 PSKTPVRPRAPRPPLH 264
A R P H
Sbjct: 179 --------WASRKPNH 186
>gi|190405722|gb|EDV08989.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 262
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
TA Q N Q ++ S +Q E ++YV D++ V+E L +F G V
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 109 RICGDP--NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
R+C D + L +A+V F D E R A+ L + P++ + + +P+
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL--- 120
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAF 220
R+ S I+ N+ + D K ++ SV G++ ++ D ++ + F
Sbjct: 121 ----RKKGSGNIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRVSP 249
E A+ AI ALN G +L I V+P
Sbjct: 174 EEEGAAKEAIDALN--GMLLNGQEIYVAP 200
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T+YV++ E + LF CG++VD R NS RF +V+F + A+ A SL
Sbjct: 747 TLYVTNFPPTADETCIRDLFKDCGEIVDIRFPSLKYNSHRRFCYVQFASSDEAQKATSLH 806
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQGDIKLF 195
G LG +T +A ++ P + ER R +Y NID + D++
Sbjct: 807 GKQLG-------GKETLVAKIS---APDQKHERSGAVYEGREVYIRNIDFQAHDNDVQEL 856
Query: 196 FESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAALNCS 236
F+ G ++++RL + T FV F+ E A+AA+ +
Sbjct: 857 FQKY-GRIEKVRLPPGPKKGTHKGYGFVTFSAKEEALAAVEGA 898
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 23/196 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLDKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F + GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 247 VSPSKTPVRPRAPRPP 262
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQ--CA 59
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPS 250
F GE+ R++ D Q S AFV F A AA+N +G LGS IR + S
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWS 172
>gi|330802862|ref|XP_003289431.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
gi|325080473|gb|EGC34027.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
Length = 168
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-CGDPNSVLRFAFVEFTDEE 129
A +DE+ ++V + +V E+++ T F CG++ + ++ G+P V AFV F E+
Sbjct: 2 AAEDEL---KIFVGQLPSRVNEDEIRTYFEECGEITNVKVLSGNPQRVA--AFVTFATED 56
Query: 130 GARAALSLAGTML-GFYPVRV--LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
G AA++ G G P+R+ SK + PT TI NI
Sbjct: 57 GKNAAIAFNGKDFNGNGPLRINAANSKPSDGEGEPT--------------TIVARNIAFS 102
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVEFAMAESAIAALNCSGAVLGSL 243
V + +K FF+ CG++ R+ L Y+ S R+ AFV F E+ A+ +G +
Sbjct: 103 VDETLVKEFFQG-CGKITRVSLP-TYEDSGRLKGFAFVSFDSEEAVDKAIALAGTMFEGR 160
Query: 244 PIRVSPS 250
I+V S
Sbjct: 161 EIQVEKS 167
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Query: 50 AFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VD 107
AF ++ G R+N S E T+ +I V E + F CG++ V
Sbjct: 63 AFNGKDFNGNGPLRINAANSKPSDGEGEPTTIVARNIAFSVDETLVKEFFQGCGKITRVS 122
Query: 108 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS 152
D + FAFV F EE A++LAGTM ++V S
Sbjct: 123 LPTYEDSGRLKGFAFVSFDSEEAVDKAIALAGTMFEGREIQVEKS 167
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 42 KVLCLFNTAFQKRNGYSQGKRRMNCRT---SNAQQDEVIRRTVYVSDIDQQVTEEQLATL 98
+VL FN G + R+N T + D+ T++V D+ V++ L +
Sbjct: 130 RVLQTFNGTIMPNGGQN---FRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEV 186
Query: 99 FLT------CGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 151
F T +VV R G + FV F DE E RA + G + P+R+ P
Sbjct: 187 FRTRYNSVKGAKVVIDRTTG---RTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGP 243
Query: 152 -------SKTAIAPV-NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 203
++T+ A NP +++E + + TI+ N+D VT +K F + GE+
Sbjct: 244 ASNKNLGTQTSKASYQNPQ--GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVF-TQYGEL 300
Query: 204 QRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPSKTPVRPRAPRPP 262
+++ R FV+FA SA AL +G +LG +R+S ++P + + P
Sbjct: 301 VHVKI----PSGKRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDP 356
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+D V+E +L +F GQVV R+C D L +A+V + + A AL L
Sbjct: 27 SLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGTHQDASQALEL 86
Query: 138 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
T++ P+R++ S R R+ + I+ N++K + + F
Sbjct: 87 LNFTLVKGKPIRIMYSH------------RDPSIRKSGAANIFIKNLEKSIDNKALHDTF 134
Query: 197 ESVCGEVQRLR-LLGDYQHSTRIAFVEFAMAESA-IAALNCSGAVLGSLPIRVSP 249
S G + R ++ D +S FV+F ESA IA +G ++ + V+P
Sbjct: 135 -SAFGTILSCRVVMDDAGNSKGYGFVQFEKEESAQIAIEKVNGMLINDRQVSVAP 188
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 9/187 (4%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
VYV ++ + T+E L +F G + + D + + F FV F + ++ A A +L
Sbjct: 205 NVYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGKSKCFGFVNFENVDDAANAVENL 264
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTFLP-RSEDEREMCSRTIYCTNIDKKVTQGDIK 193
G ++ +Y R A + F R E E + +Y NID + ++
Sbjct: 265 NGKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLKNIDDSIDDEKLR 324
Query: 194 LFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSPSK 251
F +V G V +++ Q S FV F+ E A+ A+N +G ++GS P+ V+ ++
Sbjct: 325 ELF-AVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMNGKMVGSKPLYVALAQ 383
Query: 252 TPVRPRA 258
RA
Sbjct: 384 RKEERRA 390
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 63 RMNCRT---SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNS-- 116
R+N T + D+ T++V D+ V++ L +F T V ++ D N+
Sbjct: 146 RLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGR 205
Query: 117 VLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP-------SKTAIAPV-NPTFLPRS 167
+ FV F DE E RA + G + P+R+ P ++T+ A NP +
Sbjct: 206 SKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQ--GGA 263
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 227
++E + + TI+ N+D VT +K F + GE+ +++ R FV+FA
Sbjct: 264 QNENDPNNTTIFVGNLDPNVTDEHLKQVF-TQYGELVHVKI----PSGKRCGFVQFADRS 318
Query: 228 SAIAALNC-SGAVLGSLPIRVSPSKTPVRPRAPRPP 262
SA AL +G +LG +R+S ++P + + P
Sbjct: 319 SAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDP 354
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 42 KVLCLFNTAFQKRNGYSQGKRRMNCRT---SNAQQDEVIRRTVYVSDIDQQVTEEQLATL 98
+VL FN G + R+N T + D+ T++V D+ V++ L +
Sbjct: 130 RVLQTFNGTIMPNGGQN---FRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEV 186
Query: 99 FLT------CGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 151
F T +VV R G + FV F DE E RA + G + P+R+ P
Sbjct: 187 FRTRYNSVKGAKVVIDRTTG---RTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGP 243
Query: 152 -------SKTAIAPV-NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 203
++T+ A NP +++E + + TI+ N+D VT +K F + GE+
Sbjct: 244 ASNKNLGTQTSKASYQNPQ--GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVF-TQYGEL 300
Query: 204 QRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPSKTPVRPRAPRPP 262
+++ R FV+FA SA AL +G +LG +R+S ++P + + P
Sbjct: 301 VHVKI----PSGKRCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQTQQDP 356
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSLA 138
+YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE-- 101
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE- 197
ML F PV P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 102 --MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYDT 149
Query: 198 -SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
S G + ++ + ++ FV++ ESA A+N +G +L + V P
Sbjct: 150 FSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 204
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 80 TVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALS 136
+Y+ ++D V + E+L LF G + C++ D N V + + FV F + E+ RA ++
Sbjct: 325 NLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVA 384
Query: 137 LAGTMLGFYPVRV 149
+ G M+G P+ V
Sbjct: 385 MNGKMVGSKPLYV 397
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 48 NTAFQKRNGYSQGKRRMNCRTSNAQQDEVI------RRTVYVSDIDQQVTEEQLATLFLT 101
N+A +K NG G +++ + D V+ +YV ++D +TEE L F
Sbjct: 155 NSAIEKLNGSIVGDKQIYVGKFVKKSDRVLPSPDAKYTNLYVKNLDPGITEELLQEKFSE 214
Query: 102 CGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS-LAGTMLG---FYPVRVLPSKTAI 156
G++V I D S F FV F + + AR A+ + GT LG Y R
Sbjct: 215 FGKIVSVAIARDECGSSRGFGFVNFENPDDARWAMERMNGTELGSKVLYVGRAQKRAERE 274
Query: 157 APVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 215
+ F R E + +Y NID VT +++ F S CG + +L+ D +
Sbjct: 275 QILRRQFEEKRKEQITKFKGSNVYVKNIDDDVTDEELREHF-SQCGTITSAKLMKDDKGR 333
Query: 216 TR-IAFVEFAMAESAIAALNC 235
++ FV F+ +E A A+N
Sbjct: 334 SKGFGFVCFSSSEEASKAVNT 354
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Query: 31 WLLVWYFLSLIKVLCLFNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQV 90
W + + + L+ QKR Q RR Q + VYV +ID V
Sbjct: 247 WAMERMNGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKGSNVYVKNIDDDV 306
Query: 91 TEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLAGTMLGFYPVR 148
T+E+L F CG + ++ D + F FV F + EE ++A + G M P+
Sbjct: 307 TDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFHGYMFHRKPLY 366
Query: 149 V 149
V
Sbjct: 367 V 367
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 169 EDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEES 228
Query: 131 ARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
AAL L G L PV V P+ KT T +P +Y N
Sbjct: 229 VAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVP---------FHRLYVGN 279
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 240
I +T+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 280 IHFSITEQDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDL 338
Query: 241 GSLPIRVS 248
PIRV
Sbjct: 339 AGRPIRVG 346
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFA 224
+EDER+ RT++ + ++ ++K FFE G V +++ D S + +VEF
Sbjct: 168 TEDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 224
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPSK 251
ES AAL +G L +P+ V P++
Sbjct: 225 TEESVAAALQLTGQKLLGIPVIVQPTE 251
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 58 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 117
++ R + ++ QQ V +YV +I +TE+ L +F G++ ++ D +
Sbjct: 252 AEKNRAVKTESTGTQQTSVPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDSGR 311
Query: 118 LR-FAFVEFTDEEGARAALS-LAGTMLGFYPVRV 149
R + FV+F D AR AL + G L P+RV
Sbjct: 312 SRGYGFVQFRDATQAREALEKMNGFDLAGRPIRV 345
>gi|391329197|ref|XP_003739062.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Metaseiulus occidentalis]
Length = 399
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
E IRRT+YV ++D +T E + F CG++ R+ G+ + ++ AFVEFT++ A
Sbjct: 164 EEIRRTIYVGNLDPNLTNEIVMKFFSQCGEIKYVRMGGETGASMKHAFVEFTEQASVGNA 223
Query: 135 LSLAGTMLG 143
GT+LG
Sbjct: 224 FQFNGTLLG 232
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
S++ E RTIY N+D +T + FF S CGE++ +R+ G+ S + AFVEF
Sbjct: 159 SDENVEEIRRTIYVGNLDPNLTNEIVMKFF-SQCGEIKYVRMGGETGASMKHAFVEFTEQ 217
Query: 227 ESAIAALNCSGAVLGSLPIRVSPS 250
S A +G +LGS + VS S
Sbjct: 218 ASVGNAFQFNGTLLGSRAMVVSHS 241
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 136
++YV D+D VT+ QL F GQVV R+C D L + +V FT ++ ARA
Sbjct: 41 SLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAIQE 100
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L PVRV+ S R R + I+ N+DK + + F
Sbjct: 101 LNYIPLNGKPVRVMYSH------------RDPSVRRSGAGNIFIKNLDKSIDHKALHDTF 148
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
SV G + ++ D S FV++ ESA A+ +G +L + V P
Sbjct: 149 -SVFGNIISCKVAVDSSGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVYVGP 202
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +YV ++D V++E+L LF G V C++ DPN + R + FV F T EE
Sbjct: 317 DKFQSSNLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEAT 376
Query: 132 RAALSLAGTMLGFYPVRV 149
+A ++G M+ P+ V
Sbjct: 377 KAMSEMSGKMIENKPLYV 394
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 169 EDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEES 228
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVT 188
AAL L G L PV V P++ A N S ++ +Y NI +T
Sbjct: 229 VAAALQLTGQKLLGIPVIVQPTE---AEKNRAVKTESTGTQQTSVPFHRLYVGNIHFSIT 285
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIR 246
+ D++ FE GE++ ++L D +R FV+F A A AL +G L PIR
Sbjct: 286 EQDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIR 344
Query: 247 VS 248
V
Sbjct: 345 VG 346
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFA 224
+EDER+ RT++ + ++ ++K FFE G V +++ D S + +VEF
Sbjct: 168 TEDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 224
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPSK 251
ES AAL +G L +P+ V P++
Sbjct: 225 TEESVAAALQLTGQKLLGIPVIVQPTE 251
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 58 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 117
++ R + ++ QQ V +YV +I +TE+ L +F G++ ++ D +
Sbjct: 252 AEKNRAVKTESTGTQQTSVPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDSGR 311
Query: 118 LR-FAFVEFTDEEGARAALS-LAGTMLGFYPVRV 149
R + FV+F D AR AL + G L P+RV
Sbjct: 312 SRGYGFVQFRDATQAREALEKMNGFDLAGRPIRV 345
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 131
DE RRTV+V + ++ +L F G V + +I D N +VEF +EE
Sbjct: 184 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 243
Query: 132 RAALSLAGTMLGFYPVRVLPSKTA----IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 187
AAL L G L PV V P++ + + P S + +Y NI +
Sbjct: 244 AAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGHPNS-----VPFHRLYVGNIHFSI 298
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPI 245
T+ D++ FE GE++ ++L D +R FV+F A A AL +G L PI
Sbjct: 299 TETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPI 357
Query: 246 RVS 248
RV
Sbjct: 358 RVG 360
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 24/184 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ ++D + + L F T G ++ C++ D N F FV F
Sbjct: 87 SQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFGNILSCKVVCDENGSRGFGFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
E A A++ ML + K + F R E E E+ +R + TNI K
Sbjct: 147 THEAANQAINTMNGML------LNDRKVFVG----HFKSRQEREAELGARALEFTNIYVK 196
Query: 187 VTQGDI------KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGA 238
+GD+ +LF S G+ ++++ D +R FV F E A A+ N +G
Sbjct: 197 NFEGDMDDECLQELF--SQFGKTLSVKVMVDENGQSRGFGFVNFEKHEEAQKAVSNMNGK 254
Query: 239 VLGS 242
LG
Sbjct: 255 ELGG 258
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ I+ N+D + D K +
Sbjct: 72 MNFEVIKGRPIRIMWSQ------------RDPGLRKSGIGNIFIKNLDDSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A+N +L
Sbjct: 117 DTFSTFGNILSCKVVCDENGSRGFGFVHFETHEAANQAINTMNGML 162
>gi|299743563|ref|XP_001835851.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
gi|298405712|gb|EAU85916.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
Length = 1042
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 47/221 (21%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS--- 136
TV+V+D+ +QVTE++L +LF CG + + +I PN+V+ A VEF + + AAL+
Sbjct: 669 TVFVADLPEQVTEDELKSLFKDCGSIREVKITKLPNAVV--ALVEFFERDSVPAALTKDK 726
Query: 137 --LAGTMLGF---YPVRVLPSK---------------------------TAIAPVNPTFL 164
L G + + + VR PSK + P P +
Sbjct: 727 KRLQGQEISYGMLFDVR-WPSKKFKTTRRFCYVQFTSPDAAQQALELHRKELEPNLPLNV 785
Query: 165 ----PRSEDER---EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HST 216
P + ER + R +Y + K T+ D++ F + G+V+ +R+ + H+
Sbjct: 786 YISNPERKKERTDHDANEREVYVAGLSKFTTKADLEKLF-ATYGKVKDVRMATEQDGHAR 844
Query: 217 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPR 257
AFVE+ + A AL+ + L I V+ + VR R
Sbjct: 845 GYAFVEYEEPQDARRALDANNYELKKRRIAVTLADPRVRAR 885
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 78/179 (43%), Gaps = 16/179 (8%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 114
N Y R RT + + R VYV+ + + T+ L LF T G+V D R+ +
Sbjct: 784 NVYISNPERKKERTDH----DANEREVYVAGLSKFTTKADLEKLFATYGKVKDVRMATEQ 839
Query: 115 NSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVL---PSKTAIAPVNPTFLPRSEDE 170
+ R +AFVE+ + + AR AL L + V P A + T L R+
Sbjct: 840 DGHARGYAFVEYEEPQDARRALDANNYELKKRRIAVTLADPRVRARHNKSETGLGRNA-- 897
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 229
E+ SR+I N+ +G ++ FE V V+R+ + D R A VE A A
Sbjct: 898 -EIRSRSIRVRNLPPNTQEGLLQQTFEKVAA-VRRVEVFAD----KREAAVELETAAEA 950
>gi|10086463|gb|AAG12523.1|AC015446_4 Similar to Polyadenylate-Binding Proteins 2 and 5 [Arabidopsis
thaliana]
Length = 338
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
R V+V ++D+ + +QL +F G+V+ C++ D + V + + FV+F + A +
Sbjct: 101 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 160
Query: 137 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
GT++ + V P F+ R + ++ +Y N+ + T D+K
Sbjct: 161 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 209
Query: 196 FESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSK 251
F GE+ ++ D + S R FV F AE+A+ A+ +G V+ + V ++
Sbjct: 210 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQ 266
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D N + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML L K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIEKVNGML-------LNGKKVYVG---RFIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEF---AMAESAIAALNCS 236
N + +++ ++ FE G++ +++ D S FV F AE+A+ ALN
Sbjct: 197 KNFGEDLSEEQLRNMFEKF-GKITSYKVMSKDDGKSKGFGFVAFESPEAAETAVDALNGK 255
Query: 237 GAVLG 241
V G
Sbjct: 256 ELVEG 260
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 19/166 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL
Sbjct: 12 SLYVGDLHSDITEAMLFDKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 71
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F +R P + + +P+ R+ ++ N+D+ + D K ++
Sbjct: 72 ----MNFDLIRGRPIRIMWSQRDPSL-------RKSGVGNVFIKNLDRSI---DNKAMYD 117
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D +++ FV F E+A ++ +L
Sbjct: 118 TFSAFGNILSCKVAQDENGTSKGYGFVHFETEEAANKSIEKVNGML 163
>gi|167517070|ref|XP_001742876.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779500|gb|EDQ93114.1| predicted protein [Monosiga brevicollis MX1]
Length = 1825
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDE 128
A + E RTV+V ++D VTE++L F CG++VD R+ + + +A++EF
Sbjct: 641 QAHKVEAEDRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGKAKGYAYLEFASA 700
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-----------RT 177
ALS ++G P + R D +M S ++
Sbjct: 701 SAVNPALSKDRQIMG---------------TRPMLVDRYVDRSQMPSLPFKHTTDKNPKS 745
Query: 178 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM-AESAIAALNC 235
++ N+D K ++ +IK F G V+ +RL+ + S R +V+F A++A A
Sbjct: 746 LFVKNLDYKASEAEIKDLFNK-HGAVEAVRLVTKFDGSRRDFCYVDFVTEADAAKAQAAL 804
Query: 236 SGAVLGSLPIRVSPSKTP 253
G +L +RV+ SK P
Sbjct: 805 DGHMLHGRALRVNISKPP 822
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 223
PR + E RT++ N+D VT+ +++ F + CGE+ +R+ +++ + A++EF
Sbjct: 639 PRQAHKVEAEDRTVFVKNLDFSVTEDELRARF-ADCGEIVDVRMPFNHKGKAKGYAYLEF 697
Query: 224 AMAESAIAALNCSGAVLGSLPIRVS 248
A A + AL+ ++G+ P+ V
Sbjct: 698 ASASAVNPALSKDRQIMGTRPMLVD 722
>gi|91805911|gb|ABE65684.1| polyadenylate-binding protein [Arabidopsis thaliana]
Length = 267
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
R V+V ++D+ + +QL +F G+V+ C++ D + V + + FV+F + A +
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 137 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
GT++ + V P F+ R + ++ +Y N+ + T D+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 196 FESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSK 251
F GE+ ++ D + S R FV F AE+A+ A+ +G V+ + V ++
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQ 195
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D++ VT+ L LF GQVV R+C D + L + +V ++ + A AL
Sbjct: 25 SLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALD- 83
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F P+ P + + +P+ R+ S I+ N+DK + + F
Sbjct: 84 ---MLNFTPLNGSPIRIMYSHRDPSV-------RKSGSGNIFIKNLDKGIDHKALHDTF- 132
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S G + ++ D ++ FV+F ESA A+ +G +L + V P
Sbjct: 133 SAFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 186
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D + +++L LF G + C++ DPN + R + FV F T EE +
Sbjct: 301 DKFQGANLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEAS 360
Query: 132 RAALSLAGTMLGFYPVRV 149
+A + + G M+ P+ V
Sbjct: 361 KALMEMNGKMVVSKPLYV 378
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 81/188 (43%), Gaps = 22/188 (11%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 169 EDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEES 228
Query: 131 ARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
AAL L G L PV V P+ KT T +P +Y N
Sbjct: 229 VAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVP---------FHRLYVGN 279
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 240
I +T+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 280 IHFSITEQDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDL 338
Query: 241 GSLPIRVS 248
PIRV
Sbjct: 339 AGRPIRVG 346
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFA 224
+EDER+ RT++ + ++ ++K FFE G V +++ D S + +VEF
Sbjct: 168 TEDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 224
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPSK 251
ES AAL +G L +P+ V P++
Sbjct: 225 TEESVAAALQLTGQKLLGIPVIVQPTE 251
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 11/183 (6%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 127
+DE +RTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 172 EDERDKRTVFVQQLAARLRSKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 228
Query: 128 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 187
EE AA+ L G L P+ ++ T P S + ++ +Y NI +
Sbjct: 229 EESVAAAIQLTGQKLLGIPIIAQLTEAEKNRQVRTAEPASNNPNQIPFHRLYVGNIHFSI 288
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPI 245
T+GD++ FE GE++ ++L + Q +R FV+F A AL +G L PI
Sbjct: 289 TEGDLQNVFEPF-GELEFVQLQKEDQGRSRGYGFVQFRDPHQAREALEKMNGFDLAGRPI 347
Query: 246 RVS 248
RV
Sbjct: 348 RVG 350
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 21/182 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F + GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 247 VS 248
+
Sbjct: 168 TN 169
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 24/196 (12%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 132
+DE RT+YV ++ +QVTE+ + LF G C++ + + FVEF D A
Sbjct: 108 EDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKMISEHAGNDPYCFVEFYDHNHAS 167
Query: 133 AALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
AAL+ + G + V+ VN P + ++ ++ ++ D
Sbjct: 168 AALTAMNGRKIMHKEVK----------VNWATTPSGNKKDTSNHHHVFVGDLSPEIDTTD 217
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+K F G++ R++ D Q + ++FV AE+AI A+ SG LG IR
Sbjct: 218 LKAAFAPF-GKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAM--SGQWLGGRAIR 274
Query: 247 VSPSKTPVRPRAPRPP 262
+ + R P PP
Sbjct: 275 TNWAT-----RKPPPP 285
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 69 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFT 126
S ++D V+V D+ ++ L F G++ D R+ D + + FV F
Sbjct: 192 SGNKKDTSNHHHVFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFV 251
Query: 127 DEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC----------- 174
++ A A+ +++G LG +R T A P +E ++++
Sbjct: 252 NKVDAENAIGAMSGQWLGGRAIR-----TNWATRKPPPPKSNEGQKQLSYDEVLCQASPT 306
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 234
+ T+YC I K +T+ ++ F + G +Q +R+ + +S I F +A AI +N
Sbjct: 307 NTTVYCGGITKGLTEDLMRNTFSNF-GPIQEIRVFPEKGYSF-IRFFSHEVAAMAIVTVN 364
>gi|86170621|ref|XP_966051.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|46362293|emb|CAG25231.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 582
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 81/217 (37%), Gaps = 57/217 (26%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 136
I VYV ++ +TEE + F +C +++ P ++ +EF EG A
Sbjct: 7 IANVVYVKNLSSDITEENIREKFGSCDEIISITFKNFPGLNQKYCQIEFKTSEGITNASR 66
Query: 137 LAGTMLGFYPVRVLPSKTAIAPV-NPTFLPR----------------------------- 166
L G L P+ V + I P+ N T L
Sbjct: 67 LNGESLLNVPMVV----SVIEPIINNTNLSELSTTECDKNVNSLLDVRNSITNQGVQTLL 122
Query: 167 ------SEDEREMC----------------SRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 204
SE ++ + S+ +Y NI +K + DIK FF++V G
Sbjct: 123 LQKQVISEQKKRLVDFQNSLNEKNNKFDVFSKIVYMENIPEKYGEEDIKAFFQNV-GNTT 181
Query: 205 RLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLG 241
+L + Q AFVEF E A AALN SG +G
Sbjct: 182 SYKLQYNEQKKVHTAFVEFKNEEHAKAALNLSGTKVG 218
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
+V + VY+ +I ++ EE + F G ++ + + AFVEF +EE A+AA
Sbjct: 150 DVFSKIVYMENIPEKYGEEDIKAFFQNVGNTTSYKLQYNEQKKVHTAFVEFKNEEHAKAA 209
Query: 135 LSLAGTMLGFYPV 147
L+L+GT +G + +
Sbjct: 210 LNLSGTKVGLHEI 222
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 62 RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLR 119
R R ++ DE RRTV+V + ++ +L F G V + +I D N
Sbjct: 166 RNSTPRDTSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKG 225
Query: 120 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDER 171
+VEF EE AAL L G L PV V P+ + + + +P +P
Sbjct: 226 VGYVEFKGEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGHPNSVP------ 279
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAI 230
+Y NI +T+ D++ FE GE++ ++L D +R FV+F A A
Sbjct: 280 ---FHRLYVGNIHFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDAGQAR 335
Query: 231 AAL-NCSGAVLGSLPIRV 247
AL +G L PIRV
Sbjct: 336 EALEKMNGFDLAGRPIRV 353
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 131 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 190
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 191 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 239
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI + T+ D + FE G+V L D + +R FV F ESA A+
Sbjct: 240 FTNVYVKNISPEATEDDFRQLFEQY-GDVTSSSLARDQEGKSRGFGFVNFTTHESAAKAV 298
Query: 234 N 234
+
Sbjct: 299 D 299
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 61 SLYVGELDPAVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 120
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 121 LNYTIIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 168
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 169 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGML 212
>gi|302817804|ref|XP_002990577.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
gi|300141745|gb|EFJ08454.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
Length = 602
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 19/201 (9%)
Query: 58 SQGKRRMNCRTSNAQQDEVI--------RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 109
S+ ++ N + + + DEV +T++V +I VT+E LA F G+VV R
Sbjct: 316 SKKQKLENGKAAATKTDEVKTPAKEAGESKTLFVRNIPFSVTDEDLAQYFEDAGEVVGVR 375
Query: 110 ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG---FYPVRVLPSKT-AIAPVNPTFLP 165
I N FA VEF+ E A+ AL+ +G +G Y P T A P P
Sbjct: 376 IAQGDNGPKGFAHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTPASGPKRDRPSP 435
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIK----LFFESVCGEVQRLRLLGDYQHST--RIA 219
R+ T++ DK + I+ F+S CG ++R+++ D + A
Sbjct: 436 GFNGNRKTSGNTVFVKGFDKYQEEDSIRESLTKHFKS-CGTIERVKIPTDRETGNIKGFA 494
Query: 220 FVEFAMAESAIAALNCSGAVL 240
++EF+ + A G+ L
Sbjct: 495 YIEFSTDGAPAKAKELHGSDL 515
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 234
S+T++ NI VT D+ +FE GEV +R+ A VEF+ +A ALN
Sbjct: 344 SKTLFVRNIPFSVTDEDLAQYFED-AGEVVGVRIAQGDNGPKGFAHVEFSTEAAAQKALN 402
Query: 235 CSGAVLGSLPI-------RVSPSKTPVRPRAPRP 261
SG +G I R +P+ P R R P P
Sbjct: 403 KSGQDMGGRRIYCDLANPRGTPASGPKRDR-PSP 435
>gi|326517609|dbj|BAK03723.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 990
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 53 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 112
K S+ + + + A++ E +++ V +S++ +T E + LF CG+VVDC I
Sbjct: 339 KMQADSKAAEQASSGMTEAEKAEALKKIVQISNLSPVLTVENIKQLFGYCGKVVDCTITE 398
Query: 113 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 160
+ A+VE++ E A AAL+L+ +G P+ V LP KT+IA N
Sbjct: 399 SKH----IAYVEYSKPEEATAALALSNVDVGGRPLNVEMAKSLPQKTSIANSN 447
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 63 RMNCRTSNA--QQDEVIRRTVYVSDIDQQVTEEQLATLFLTC------GQVVDCRICGDP 114
RMN + A ++D+ T++V D+ VT+ L F + +VV RI G
Sbjct: 158 RMNWASLGAGERRDDSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRS 217
Query: 115 NSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFL-PR-SE 168
+ FV+F DE E RA + G + P+R+ P+ K P T+ P+ ++
Sbjct: 218 KG---YGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQ 274
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AM 225
E + + TI+ +D V + ++ F S GE+ ++++ R FV+F A
Sbjct: 275 GESDPNNTTIFVGGLDPTVAEEHLRQVF-SPYGELVHVKIVA----GKRCGFVQFGTRAS 329
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTP 253
AE A+++LN G LG IR+S ++P
Sbjct: 330 AEQALSSLN--GTQLGGQSIRLSWGRSP 355
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 136
R++++ D+ + E L+T F G++V ++ + + + F+EF A
Sbjct: 84 RSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAE---- 139
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
T+L Y ++P+ +N L E + TI+ ++ VT ++ F
Sbjct: 140 ---TILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHTIFVGDLAADVTDYILQETF 196
Query: 197 ESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALNCSGAVL-GSLPIRVSP--SK 251
+SV V+ +++ D S FV+FA + A+ VL + P+R+ P +K
Sbjct: 197 KSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANK 256
Query: 252 TPV 254
PV
Sbjct: 257 KPV 259
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 55 NGYSQGK--RRMNCRTSNAQ----QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG----- 103
N Y +G+ R + R +DE RRTV+V + ++ +L F G
Sbjct: 155 NDYGRGRDDERNDARNEGGNAPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEA 214
Query: 104 QVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV-----RVLPSKTAIAP 158
Q+V RI G V +VEF +E+ + AL L G L PV ++ A P
Sbjct: 215 QIVKDRISGRSKGV---GYVEFKNEDSVQLALQLTGQKLLGIPVIVQHTEAEKNRQARNP 271
Query: 159 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR- 217
P S + +Y NI VT+ D++ FE GE++ ++L D +R
Sbjct: 272 DASNGHPNS-----IPFHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRG 325
Query: 218 IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
FV+F A A AL +G L PIRV P + +H
Sbjct: 326 YGFVQFRDAGQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLMH 373
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 88/216 (40%), Gaps = 40/216 (18%)
Query: 59 QGKRRMNCRTSNA------QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 112
G R N R +N +D+ +RT++V I Q+ L F G VV+ +I
Sbjct: 152 NGDERRNSRRNNTPPEPEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVK 211
Query: 113 D--PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV-----------RVLPSKTAIAP- 158
D +VEF DEE AL L G L P+ PS+ AP
Sbjct: 212 DRVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGTAPG 271
Query: 159 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR- 217
N R +Y NI VT+ D++ FE GE++++ L D + R
Sbjct: 272 ANGAPFHR-----------LYVGNIHFSVTEKDLQEIFEPF-GELEQVILQRDEMNPGRS 319
Query: 218 -----IAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
+ FV+ + A++A+A +N G L IRV
Sbjct: 320 KGYGFVQFVDPSHAKNALAEMN--GFELAGRQIRVG 353
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 125
T+ Q E + ++YV D+D V+E L +F G V R+C D + L +A+V F
Sbjct: 24 TNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNF 83
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
D + A+ A+ L F P++ + + +P+ R+ + I+ N+
Sbjct: 84 NDHDAAKTAIE----KLNFTPIKGKLCRIMWSQRDPSL-------RKKGAGNIFIKNLHP 132
Query: 186 KVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC-SGAVLG 241
+ D K ++ SV G + ++ D ++ +V F ESA A++ +G +L
Sbjct: 133 DI---DNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLN 189
Query: 242 SLPIRVSP 249
I V P
Sbjct: 190 GQEIYVGP 197
>gi|340381668|ref|XP_003389343.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Amphimedon queenslandica]
Length = 402
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC---GDPNSVLRFAFVEFTDEEGARAALS 136
T++VS++ E+QL LF CGQV D R+ G +A+VEFT E AL
Sbjct: 170 TIFVSNLASDTDEDQLHKLFSQCGQVADVRLIKKFGGKFGTNVYAYVEFTTSEPTVEALK 229
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T+L R + + A + ++ T++ TN+ +++ D++ F
Sbjct: 230 LDHTVLN---SRAIYVSSCNADRQNKYNNKA---------TVFVTNVAHDLSERDLEDIF 277
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSKTPV 254
+ V +V+ +RL+ + + ++ A++E+ SA AA+ + + I+V+ SK P
Sbjct: 278 KEV-DQVKAVRLVRNKKGRSKGFAYIEYDTESSARAAVFQLNDREMAGKNIKVAISKPPA 336
Query: 255 RPRAP 259
P
Sbjct: 337 SKELP 341
>gi|403162308|ref|XP_003890369.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172551|gb|EHS64663.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1087
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 136
R T+YV++ + +E + + F G + D R S RF +++FT A AAL
Sbjct: 732 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 791
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L + + V P + ++ ++ + + +Y T + K V + D++ F
Sbjct: 792 L-------HNLEVSPKQKMSVLISDPTRKQTRSDNHANEKELYITCLSKYVQEDDLRKLF 844
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 250
S GE++ +R++ D HS AFVEF SA AAL+ + L I V+ S
Sbjct: 845 -SQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSMNNVELKKRRIGVTIS 898
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FA 121
R R+ N + + +Y++ + + V E+ L LF G++ R+ D + FA
Sbjct: 812 RKQTRSDNHANE----KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFA 867
Query: 122 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKT---AIAPVNPTF-----LPRSEDEREM 173
FVEF +E A+AALS+ L + V S ++A N TF L + D R
Sbjct: 868 FVEFQNEMSAKAALSMNNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR-- 925
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 229
SR++ +NI + + I+ FE G+V + + A VEFA+ + A
Sbjct: 926 -SRSVRVSNIAEGTQEALIQQAFEQF-GKVLKTITYPEKNE----ALVEFALEKDA 975
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
TA Q N Q ++ S +Q E ++YV D++ V+E L +F G V
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 109 RICGDP--NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
R+C D + L +A+V F D E R A+ L + P++ + + +P+
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL--- 120
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAF 220
R+ S I+ N+ + D K ++ SV G++ ++ D ++ + F
Sbjct: 121 ----RKKGSGNIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRVSP 249
E A+ AI ALN G +L I V+P
Sbjct: 174 EEEGAAKEAIDALN--GMLLNGQEIYVAP 200
>gi|302803765|ref|XP_002983635.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
gi|300148472|gb|EFJ15131.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
Length = 573
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
K+++ +T + E +T++V +I VT+E LA F G+VV RI N F
Sbjct: 300 KQKLEVKTPAKEGGES--KTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQGDNGPKGF 357
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPV-------RVLPSKTAIAPVNPTFLPRSEDEREM 173
A VEF+ E A+ AL+ +G +G + R P A P P R+
Sbjct: 358 AHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTP---ASGPKRDRPSPGFNGNRKT 414
Query: 174 CSRTIYCTNIDKKVTQGDIK----LFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAE 227
T++ DK + I+ F+S CG ++R+++ D + A++EF+
Sbjct: 415 SGNTVFVKGFDKYQEEDSIRDSLTKHFKS-CGTIERVKIPTDRETGNIKGFAYIEFSTDG 473
Query: 228 SAIAALNCSGAVL 240
+ A G+ L
Sbjct: 474 APAKAKELHGSDL 486
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEE 129
+D+ +RT++V I Q+ L T F G V++ +I D LR +VEF DEE
Sbjct: 171 EDDRDKRTIFVQQISQRAETHHLRTFFERVGPVIEAQIVKD-RVTLRSKGVGYVEFKDEE 229
Query: 130 GARAALSLAGTMLGFYP-VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
AL L G L P + L P+ + +Y NI VT
Sbjct: 230 SVAKALELTGQKLKGVPIIAQLAEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVT 289
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGS 242
+GD++ FE G ++++ L D + R + FV+ A A++A+A +N G L
Sbjct: 290 EGDLRDIFEPF-GALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALAEMN--GFELAG 346
Query: 243 LPIRV 247
IRV
Sbjct: 347 RQIRV 351
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D++ VT+ QL LF GQVV R+C D ++ L + +V +++ A A+
Sbjct: 39 SLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAME- 97
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F PV + + +PT R+ S I+ N+DK + + F
Sbjct: 98 ---MLNFTPVNGKSIRVMYSHRDPTL-------RKSGSANIFIKNLDKSIDNKALHDTFS 147
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D S FV++ ESA A++ +L
Sbjct: 148 SF-GNILSCKIATDSNGQSKGYGFVQYDNEESAQGAIDKLNGML 190
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 65 NCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 119
+ R + +D +R++ +++ ++D+ + + L F + G ++ C+I D N +
Sbjct: 108 SIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKG 167
Query: 120 FAFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--- 175
+ FV++ +EE A+ A+ L G ++ V V FL + E E
Sbjct: 168 YGFVQYDNEESAQGAIDKLNGMLMNDKQVYV-----------GHFLRKQERESTTGMTKF 216
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
+ +Y N+ + T ++K F G + ++ D ++ F+ F AE A A+
Sbjct: 217 QNVYVKNLSESTTDDELKKVFGEF-GNITSAVVMRDADGKSKCFGFINFETAEDAAKAVE 275
Query: 235 C 235
Sbjct: 276 S 276
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
QK++ Q + +T+ D+ +YV ++D + +E+L LF G + C++
Sbjct: 293 QKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVM 352
Query: 112 GDPNSVLRFA-FVEF-TDEEGARAALSLAGTMLGFYPVRV 149
DP+ + R + FV F T EE +RA + G M+ P+ V
Sbjct: 353 RDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYV 392
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP FAFVE+ EGA+ AL +
Sbjct: 175 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 234
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G MLG ++V + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 235 NGAMLGGRNIKV--GRPSNMPQAQQVIDEIQEEAKNYNR-IYIASIHPDLTEEDIKSVFE 291
Query: 198 SVCGEVQRLRL-LGDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + ++ G HS + AF+E+ +SAI A+ LG +RV S TP
Sbjct: 292 AF-GAIATCKMSQGSSAHSHKGYAFIEYQTNQSAIEAIASMNLFDLGGQLLRVGRSITP 349
>gi|125591671|gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
Length = 728
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 470 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 529
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER-------EMCSRTIYCTNIDKKVTQG 190
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 530 AGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 584
Query: 191 DIKLFFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 245
I+ E CGE+ R+ + DY+ S +A+++FA S A +G+ LG +
Sbjct: 585 QIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSL 644
Query: 246 RVSPSKTPVRPR 257
V + RPR
Sbjct: 645 YVDEA----RPR 652
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL----GDYQHSTRIAF 220
P S + S+T++ N+ V Q +K FF+ GEV +R G+++
Sbjct: 459 PASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQE-AGEVVDIRFSTFEDGNFRG---FGH 514
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRV 247
VEFA AE+A AL +G L P+R+
Sbjct: 515 VEFATAEAAKKALELAGHDLMGRPVRL 541
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D VT+ QL LF GQVV R+C D + L + +V +++ + A AL +
Sbjct: 35 SLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 94
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ I+ N+DK + + F
Sbjct: 95 ----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDKAIDHKALHDTFS 143
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S G + ++ D S FV+F E+A A+ +G +L + V P
Sbjct: 144 SF-GNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGP 196
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +YV ++D + +E+L LF + G + C++ DPN V R + FV F T EE +
Sbjct: 311 DKYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEAS 370
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
RA L + G M+ P+ V T R ED R
Sbjct: 371 RALLEMNGKMVASKPLYV------------TLAQRKEDRR 398
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+EE L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ RV K VN P + + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLDKEIK--VNWATSPGNTPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 247
+ F + GE+ R++ D Q S AFV F A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 248 S 248
+
Sbjct: 169 N 169
>gi|328772736|gb|EGF82774.1| hypothetical protein BATDEDRAFT_22908 [Batrachochytrium
dendrobatidis JAM81]
Length = 961
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 137
+ +YVS++ Q+ + QL +F G++ + R+ + FA+++F EE A +L +
Sbjct: 696 KTKIYVSNLSPQMQKRQLRHIFSEFGKIREIRLQN--RKTMAFAYIDFEKEEDAIKSLKM 753
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
++ + K +A +PT + ++ + +Y +N+ +T+ D++ F
Sbjct: 754 NQAVIE----KTGDRKIGVAISDPT------KKMQIDHKKLYVSNLSHTMTEDDLQELF- 802
Query: 198 SVCGEVQRLRLL----GDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP 253
S GE+ LR++ G+ S IAFVE+ + A A+ +G ++ I VS S
Sbjct: 803 SKFGEISALRVVRMPNGN---SKGIAFVEYNQEDHAKEAMTLNGTMVDGRLIVVSVSDPN 859
Query: 254 VR 255
+R
Sbjct: 860 LR 861
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 60 GKRRMNCRTSN-AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 118
G R++ S+ ++ ++ + +YVS++ +TE+ L LF G++ R+ PN
Sbjct: 762 GDRKIGVAISDPTKKMQIDHKKLYVSNLSHTMTEDDLQELFSKFGEISALRVVRMPNGNS 821
Query: 119 R-FAFVEFTDEEGARAALSLAGTML 142
+ AFVE+ E+ A+ A++L GTM+
Sbjct: 822 KGIAFVEYNQEDHAKEAMTLNGTMV 846
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR-----AAL 135
VY+S + Q TE + F GQV D + + S AFVEF+ E R +
Sbjct: 610 VYLSKLSQNTTESTILKHFGVYGQVEDLFMQPNEESGELEAFVEFSKAELVRKIVLDGPI 669
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
S+ GT++ P R PS+ F E + IY +N+ ++ + ++
Sbjct: 670 SINGTVVT--PCRCRPSQMVW-----DFKQHEEKTK------IYVSNLSPQMQKRQLRHI 716
Query: 196 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
F S G+++ +RL + + A+++F E AI +L + AV+
Sbjct: 717 F-SEFGKIREIRLQN--RKTMAFAYIDFEKEEDAIKSLKMNQAVI 758
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D VT+ QL LF GQVV R+C D S L + +V + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +PT R + I+ N+DK + + F
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAIDHKALHDTF- 135
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S G + ++ D S FV++ E+A A+ +G +L + V P
Sbjct: 136 SAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGP 189
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSL 137
+Y+ ++D +++E+L LF G + C++ DP+ V + + FV F++ EE +RA +
Sbjct: 310 NLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEM 369
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 370 NGKMVVSKPLYV 381
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 135
RTV+V + ++ + L F + G++ D R+ D N R A+VEF + E A+ AL
Sbjct: 104 RTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVESAQLAL 162
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
L GT L P+++ S V+ T LPR + + + +Y ++ +T+ +K
Sbjct: 163 GLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNKGPMK-LYIGSLHYNITEEMLKG 221
Query: 195 FFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
FE G+++ ++L+ D S FV + ++ A AL+ +G L P++V+
Sbjct: 222 IFEPF-GKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVN 277
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 152 SKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 211
S+T +P P D +RT++ + ++ Q D++ FF SV G+++ +RL+ D
Sbjct: 85 SRTERRQKSPELSPEERD-----ARTVFVWQLSARIRQRDLEDFFTSV-GKIRDVRLIMD 138
Query: 212 YQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS-----KTPVRPRAPRP 261
+ S IA+VEF ESA AL +G L +PI++ S + P PRP
Sbjct: 139 NKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRP 195
>gi|297816826|ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322134|gb|EFH52555.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 599
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 125
T N ++D V+ + +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 152 TDNKEEDGVVPKKLYVGGIPYQSTEDEIRSYFRSCGVITKVDCKMRPEDGAFSGIAFITF 211
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 179
E+GA+ AL+ +G R L + + P F+PR + EM +Y
Sbjct: 212 ETEDGAKRALAFDRAAMGD---RFLTIQQYVKTTTP-FVPRRKTSSGFAPEMVDGYNRVY 267
Query: 180 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 236
N+ T+ DI KLF + V V+ + + G+++ A V+F + S AL
Sbjct: 268 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKG---YAHVDFKDSVSVAIALKLD 324
Query: 237 GAVLGSLPIRV 247
V+ P++V
Sbjct: 325 QQVICGRPVKV 335
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F T G ++ C++ D + + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSTFGNILSCKVAQDESGTSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML RV K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDKVNGML-LNGKRVFVGK---------FIPRKEREKELGEKAKRFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSG 237
N + + ++ FE + D S FV F AE A+A+LN
Sbjct: 197 KNFGEDFSDDLLREMFEKYGRITSHKVMSKDDGKSKGFGFVAFEDPEAAEKAVASLNGKE 256
Query: 238 AVLG 241
V G
Sbjct: 257 IVEG 260
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ VTE L F + G V+ R+C D L +A+V F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPADAERALD- 70
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ + P++ P + + +P+ R+ ++ N+DK + D K ++
Sbjct: 71 ---TMNYDPLKGKPIRIMWSQRDPSL-------RKSGVGNVFIKNLDKSI---DNKAMYD 117
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D +++ FV F E+A +++ +L
Sbjct: 118 TFSTFGNILSCKVAQDESGTSKGYGFVHFETEEAANKSIDKVNGML 163
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 136
++YV D++ V++ QL LF GQVV R+C D S L +A+V +++ + ARA
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEV 94
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L P+RV+ S R R S I+ N+DK + + F
Sbjct: 95 LNFAALNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHETF 142
Query: 197 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 249
S + + + S FV++ E+A A+ +G ++ P+ V P
Sbjct: 143 SSFGTILSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLNGMLINDKPVFVGP 196
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRR +A D+ +Y+ ++D + ++QL LF G++ ++ D N + +
Sbjct: 299 KRRFEQSLKDAA-DKYQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGLSKG 357
Query: 121 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI 178
+ FV F T EE ++A + G M+ P+ V F R ED + M T+
Sbjct: 358 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAMLQVTV 405
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 28/184 (15%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 115 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGY 174
Query: 121 AFVEFTDEEGARAALSLAGTML--------GFYPVRVLPSKTAIAPVNPTFLPRSEDERE 172
FV + E A A+ ML G + R S+ R E
Sbjct: 175 GFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRE-----------RQSKLEE 223
Query: 173 MCSR--TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 229
M ++ IY N+D +VTQ D FE G V + D Q +R FV F E A
Sbjct: 224 MKAQFTNIYVKNLDPEVTQDDFVKLFEQF-GNVTSAVIQTDEQGQSRGFGFVNFETHEEA 282
Query: 230 IAAL 233
A+
Sbjct: 283 QKAV 286
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L +F G V R+C D L +A+V + + +G RA
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L +++ R++ S+ R R+ I+ N+D+++ + F
Sbjct: 105 LNYSLIKGRACRIMWSQ------------RDPALRKTGQGNIFIKNLDEQIDNKALHDTF 152
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G V ++ D + S FV + AE+A A+ +L
Sbjct: 153 -AAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNGML 196
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 20/178 (11%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--LRFAFVEFTDEEGARAAL 135
R++YV D++ V E QL LF VV R+C D + L +A+V F++ + A A+
Sbjct: 32 NRSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAM 91
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
+ L F P+ P + + +PT R ++ N+D K+ D K
Sbjct: 92 EV----LNFTPLNGKPIRIMFSHRDPT-------TRRSGHANVFIKNLDTKI---DNKAL 137
Query: 196 FESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
+E+ G V ++ D S F++F E A +A+N +G ++ + V P
Sbjct: 138 YETFASFGPVLSCKVAVDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYVGP 195
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
VYV ++ + ++E L +F + G + + D N R F FV F + A AA+ L
Sbjct: 213 NVYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGKSRGFGFVNFQSPDSAAAAVEKL 272
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
G +Y R A + F R+ +M + +Y N+ + + +K
Sbjct: 273 NGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYEKMKAANLYLKNLGDTIDEERLK 332
Query: 194 LFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
F S G + +++ D Q S FV F+ E A AL+ +G ++G P+ V+
Sbjct: 333 ELF-SEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVA 388
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TD 127
N++ +++ +Y+ ++ + EE+L LF G + C++ D + + + FV F T
Sbjct: 306 NSRYEKMKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTP 365
Query: 128 EEGARAALSLAGTMLGFYPVRV 149
EE +RA + G M+G P+ V
Sbjct: 366 EEASRALSEMNGKMIGKKPLYV 387
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSG 237
N + +T +K FE ++ D S FV F AE A+ LN
Sbjct: 197 KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 256
Query: 238 AVLG 241
G
Sbjct: 257 VAEG 260
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 21/167 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + ++ D S FV F E+A +++ +L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGML 163
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSG 237
N + +T +K FE ++ D S FV F AE A+ LN
Sbjct: 197 KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 256
Query: 238 AVLG 241
G
Sbjct: 257 VAEG 260
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 21/167 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + ++ D S FV F E+A +++ +L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGML 163
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 136
++YV D++Q V EEQL LF QVV R+C D S L + +V F++ ++ A A +
Sbjct: 46 SLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMKA 105
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T L P+R++ F R R+ ++ N+D + D KL
Sbjct: 106 LNFTPLNGKPIRIM------------FSHRDPSIRKSGYGNVFIKNLDSTL---DNKLLH 150
Query: 197 ESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN 234
E+ G V ++ D S FV+F ESA A++
Sbjct: 151 ETFAAFGTVLSCKVAVDSNGQSKGYGFVQFENEESAERAIS 191
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 30/177 (16%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+ +D IR++ V++ ++D + + L F G V+ C++ D N + + FV+F
Sbjct: 121 SHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVDSNGQSKGYGFVQF 180
Query: 126 TDEEGARAALSLAGTM--------LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 177
+EE A A+S M +GF+ + ++T + P F
Sbjct: 181 ENEESAERAISFLDGMCLNDKQVYVGFFVRQQERTRTNGS---PKFT------------N 225
Query: 178 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y N+ + +T D++ F V G + ++ D +R FV F +SA AA+
Sbjct: 226 VYVKNLSETITNEDLEKVF-GVYGTITSALVMKDQTGKSRGFGFVNFQDPDSAAAAV 281
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 449 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 508
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER-------EMCSRTIYCTNIDKKVTQG 190
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 509 AGHDLMGRPVRLD-----LARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 563
Query: 191 DIKLFFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLG 241
I+ E CGE+ R+ + DY+ S +A+++FA S A +G+ LG
Sbjct: 564 QIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLG 619
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL----GDYQHSTRIAF 220
P S + S+T++ N+ V Q +K FF+ GEV +R G+++
Sbjct: 438 PASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQE-AGEVVDIRFSTFEDGNFRG---FGH 493
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRV 247
VEFA AE+A AL +G L P+R+
Sbjct: 494 VEFATAEAAKKALELAGHDLMGRPVRL 520
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSG 237
N + +T +K FE ++ D S FV F AE A+ LN
Sbjct: 197 KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 256
Query: 238 AVLG 241
G
Sbjct: 257 VAEG 260
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
+ S G + ++ D S FV F E+A +++ +G +L + V
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVG 172
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSG 237
N + +T +K FE ++ D S FV F AE A+ LN
Sbjct: 197 KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 256
Query: 238 AVLG 241
G
Sbjct: 257 VAEG 260
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
+ S G + ++ D S FV F E+A +++ +G +L + V
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVG 172
>gi|238486326|ref|XP_002374401.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
gi|220699280|gb|EED55619.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
Length = 713
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 120 CRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 179
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV + E A A+ ML L K + + R EM + +
Sbjct: 180 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 232
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
Y NID+ VT+ + + FE GE+ L D + +R FV F+ ESA AA++
Sbjct: 233 YIKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVD 288
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 110 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDSAIDNKALHDTF 157
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 158 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 201
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 11/184 (5%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFT 126
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF
Sbjct: 152 NEDERDRRTVFVQQLAARLRSRELKAFFEKVGPVTEAQIVKDRISGRSKGV---GYVEFK 208
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
+E+ AL L G L PV V ++ T P + +Y NI
Sbjct: 209 NEDSVAPALQLTGQKLLGIPVIVQVTEAEKNRQARTTEPGGSHPNHVPFHRLYVGNIHFN 268
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLP 244
VT+ D++ F+ GE++ ++L D + +R FV+F A A AL +G L P
Sbjct: 269 VTEQDLQAVFDPF-GELEFVQLQKDETNRSRGYGFVQFRDAGQAREALEKMNGFDLAGRP 327
Query: 245 IRVS 248
IRV
Sbjct: 328 IRVG 331
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
TA Q N Q ++ S +Q E ++YV D++ V+E L +F G V
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 109 RICGDP--NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
R+C D + L +A+V F D E R A+ L + P++ + + +P+
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL--- 120
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAF 220
R+ S I+ N+ + D K ++ SV G++ ++ D ++ + F
Sbjct: 121 ----RKKGSGNIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRVSP 249
E A+ AI ALN G +L I V+P
Sbjct: 174 EEEGAAKEAIDALN--GMLLNGQEIYVAP 200
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 18/197 (9%)
Query: 58 SQGKRRM---------NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
++GKR+ +T A+ E ++ +++V + V +E L T F G+VV
Sbjct: 243 AKGKRKAEDDAAPPSKKVKTDGAEGGEEVK-SIFVGRLSWNVDDEWLKTEFAEAGEVVSA 301
Query: 109 RICGD--PNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 165
R+ D F +VEF D A+ A+ ++ G + PV L T P NP
Sbjct: 302 RVQMDRQTGKSKGFGYVEFADAASAKKAVETMNGREIDGRPVN-LDLATPRGPPNPERRA 360
Query: 166 RS-EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VE 222
++ D R S T++ N+ TQ + F +V GEV +RL D F VE
Sbjct: 361 KAFGDSRSEPSATLFVGNLAFSATQDAVYELFGAV-GEVVNVRLPTDRDSGQPKGFGYVE 419
Query: 223 FAMAESAIAALNCSGAV 239
FA E+A ALN G
Sbjct: 420 FADVETASKALNELGGT 436
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D VT+ QL LF GQVV R+C D S L + +V + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +PT R + I+ N+DK + + F
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAIDHKALHDTF- 135
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S G + ++ D S FV++ E+A A+ +G +L + V P
Sbjct: 136 SAFGNILSCKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGP 189
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D +++++L LF G + C++ DP+ V + + FV F T EE +RA +
Sbjct: 310 NLYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEM 369
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 370 NGKMVVSKPLYV 381
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 31/188 (16%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
V+V ++ + EE+L +F G + + D + R F FV F + E+ ARA +L
Sbjct: 207 NVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEAL 266
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR---------------TIYCTN 182
G L V ++ +SE E E+ R +Y N
Sbjct: 267 NGYKLDNKDWFVGRAQK-----------KSEREMELKHRFEQSAQEAVDKSQGLNLYLKN 315
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVL 240
+D ++ +K F S G + +++ D S FV F+ E A AL+ +G ++
Sbjct: 316 LDDSISDDKLKELF-SPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMNGKMV 374
Query: 241 GSLPIRVS 248
S P+ V+
Sbjct: 375 VSKPLYVA 382
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 82/192 (42%), Gaps = 29/192 (15%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 127
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF D
Sbjct: 164 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGV---GYVEFKD 220
Query: 128 EEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSRTI 178
E+ AL L G L PV V ++ T +P +P +
Sbjct: 221 EDSVATALQLTGQKLLGIPVIVQVTEAEKNRQARNTEAGGPHPNHVP---------FHRL 271
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCS 236
Y NI VT+ D++ FE GE++ ++L D +R FV+F A A AL +
Sbjct: 272 YVGNIHFNVTEEDLRAVFEPF-GELEFVQLQKDESDRSRGYGFVQFRDATQAREALEKMN 330
Query: 237 GAVLGSLPIRVS 248
G L PIRV
Sbjct: 331 GFDLAGRPIRVG 342
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
TA Q N Q ++ S +Q E ++YV D++ V+E L +F G V
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 109 RICGDP--NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
R+C D + L +A+V F D E R A+ L + P++ + + +P+
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL--- 120
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAF 220
R+ S I+ N+ + D K ++ SV G++ ++ D ++ + F
Sbjct: 121 ----RKKGSGNIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRVSP 249
E A+ AI ALN G +L I V+P
Sbjct: 174 EEEGAAKEAIDALN--GMLLNGQEIYVAP 200
>gi|9294322|dbj|BAB02219.1| unnamed protein product [Arabidopsis thaliana]
Length = 610
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 11/183 (6%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSL 137
+T++ ++ Q+ + F G+VVD R+ D S + +EF E A+ AL +
Sbjct: 358 KTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALEM 417
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G +L VR+ + P N + E + SRTIY + + +IK
Sbjct: 418 NGKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQ---SRTIYVRGFSSSLGEDEIKKELR 474
Query: 198 S---VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
S CGEV R+ + D + F + AL SG+ +G I V S
Sbjct: 475 SHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQLSGSEIGGGNIHVEES---- 530
Query: 255 RPR 257
RPR
Sbjct: 531 RPR 533
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
TA Q N Q ++ S +Q E ++YV D++ V+E L +F G V
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 109 RICGDP--NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
R+C D + L +A+V F D E R A+ L + P++ + + +P+
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL--- 120
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAF 220
R+ S I+ N+ + D K ++ SV G++ ++ D ++ + F
Sbjct: 121 ----RKKGSGNIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRVSP 249
E A+ AI ALN G +L I V+P
Sbjct: 174 EEEGAAKEAIDALN--GMLLNGQEIYVAP 200
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 78 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGY 137
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV + E A A+ ML L K + + R EM ++ I
Sbjct: 138 GFVHYETAEAAETAIKAVNGML-------LNDKKVYVGHHISRKERQSKIEEMKNQFTNI 190
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
Y N+D +VTQ + FE + + D S FV F E A AA+
Sbjct: 191 YVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNFDTHEEAHAAVEA 247
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L +F G V R+C D L +A+V + + +G RA
Sbjct: 8 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 67
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L +++ R++ S+ R R+ I+ N+D+++ + F
Sbjct: 68 LNYSLIKGRACRIMWSQ------------RDPALRKTGQGNIFIKNLDEQIDNKALHDTF 115
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G V ++ D + S FV + AE+A A+ +L
Sbjct: 116 -AAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNGML 159
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSG 237
N + +T +K FE ++ D S FV F AE A+ LN
Sbjct: 197 KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 256
Query: 238 AVLG 241
G
Sbjct: 257 VAEG 260
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
+ S G + ++ D S FV F E+A +++ +G +L + V
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVG 172
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D VT+ QL +F GQVV R+C D + L + +V +T + A AL +
Sbjct: 38 SLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDI 97
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P P + + +P+ R+ + I+ N+DK + + F
Sbjct: 98 ----LNFTPFNNKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKTIDHKALHDTFS 146
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D +R FV+F E+A A++ +L
Sbjct: 147 SF-GNILSCKVATDSSGQSRGYGFVQFDNEEAAQNAIDKLNGML 189
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+ +D IR++ +++ ++D+ + + L F + G ++ C++ D + R + FV+F
Sbjct: 113 SHRDPSIRKSGTGNIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDSSGQSRGYGFVQF 172
Query: 126 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TIYCTN 182
+EE A+ A+ L G +L V V FL + E + + +Y N
Sbjct: 173 DNEEAAQNAIDKLNGMLLNDKQVYV-----------GHFLRKHERDSASNKKFNNVYVKN 221
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC 235
+ + T+ D+K F GE+ ++ D ++ FV F ++A A+
Sbjct: 222 LSESTTEEDLKNIF-GEYGEITSAVIMRDADGKSKCFGFVNFENTDAAAKAVES 274
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D +++E L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 319 NLYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 378
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 379 NGKMVVSKPLYV 390
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 31/188 (16%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
VYV ++ + TEE L +F G++ I D + + F FV F + + A+A SL
Sbjct: 216 NVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKSKCFGFVNFENTDAAAKAVESL 275
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR---------------TIYCTN 182
G + V ++ +SE E E+ S+ +Y N
Sbjct: 276 NGKKIDDKEWYVGKAQK-----------KSERELELKSQFEQSMKEAVDKYQGVNLYIKN 324
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 240
+D ++ ++K F S G + +++ D +R FV F+ E A AL +G ++
Sbjct: 325 LDDSISDENLKELF-SDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGKMV 383
Query: 241 GSLPIRVS 248
S P+ V+
Sbjct: 384 VSKPLYVA 391
>gi|146419598|ref|XP_001485760.1| hypothetical protein PGUG_01431 [Meyerozyma guilliermondii ATCC
6260]
Length = 886
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 22/191 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--------VDCRICGDPNSVLRFAFVEFT 126
+V+ R V V ++D TE +L T+F G++ D R G N +AFV F
Sbjct: 685 QVMHRQVCVKNLDYYTTESELRTVFEKHGELEEISLPIKKDMRNKGHVNG--GYAFVTFK 742
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
E A AL+ G ++ V V ++ ++ NP+ D++ RTI T
Sbjct: 743 TEPSALNALNADGELIRNRKVHVYKAQPQVSIYNPS----DYDDQ----RTITITGFPDS 794
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 246
V Q ++ F G V + L H T A +EF+ +E+ +AL + +R
Sbjct: 795 VRQEQLEAFMAEHFGTVSKSFL----DHETGSAVIEFSDSETTKSALQIESTIFDGNTLR 850
Query: 247 VSPSKTPVRPR 257
V P + P+
Sbjct: 851 VGPKSSFRNPQ 861
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA- 138
++VS+ ++ ++ LF CGQ+V R RF ++EFT E A AA+
Sbjct: 595 IWVSNFPPSFSQSEVKALFEDCGQIVSARFPSLKSGRERRFCYLEFTKPESAAAAVKKHN 654
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRS-EDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
GT L + K +A P P+ E +++ R + N+D T+ +++ FE
Sbjct: 655 GTKLS-DKISGDSFKLVVAISRP---PKKIETRKQVMHRQVCVKNLDYYTTESELRTVFE 710
Query: 198 SVCGEVQRLRL--LGDYQHSTRI----AFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
GE++ + L D ++ + AFV F SA+ ALN G ++ + + V ++
Sbjct: 711 K-HGELEEISLPIKKDMRNKGHVNGGYAFVTFKTEPSALNALNADGELIRNRKVHVYKAQ 769
Query: 252 TPVRPRAP 259
V P
Sbjct: 770 PQVSIYNP 777
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 127
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF
Sbjct: 178 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISGRSKGV---GYVEFKS 234
Query: 128 EEGARAALSLAGTMLGFYPV-----RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
E+ + AL L G L PV ++ A P + + P S + +Y N
Sbjct: 235 EDAVQQALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSTSGHPNS-----IPFHRLYVGN 289
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 240
I VT+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 290 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 348
Query: 241 GSLPIRVSPSKTPVRPRAPRPPLH 264
PIRV P + +H
Sbjct: 349 AGRPIRVGLGNDKFTPESTANLMH 372
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
TA Q N Q ++ S +Q E ++YV D++ V+E L +F G V
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 109 RICGDP--NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
R+C D + L +A+V F D E R A+ L + P++ + + +P+
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL--- 120
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAF 220
R+ S I+ N+ + D K ++ SV G++ ++ D ++ + F
Sbjct: 121 ----RKKGSGNIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRVSP 249
E A+ AI ALN G +L I V+P
Sbjct: 174 EEEGAAKEAIDALN--GMLLNGQEIYVAP 200
>gi|427798071|gb|JAA64487.1| Putative splicing factor arginine/serine-rich, partial
[Rhipicephalus pulchellus]
Length = 381
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
E IRRTVYV ++D T EQL F G+V R+ G + RFAFVEFT++ A
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFFSQMGEVKYVRMAGGESQPTRFAFVEFTEQSSVGRA 130
Query: 135 LSLAG 139
L G
Sbjct: 131 LQFNG 135
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E RT+Y N+D T + FF S GEV+ +R+ G TR AFVEF S
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFF-SQMGEVKYVRMAGGESQPTRFAFVEFTEQSSVGR 129
Query: 232 ALNCSG 237
AL +G
Sbjct: 130 ALQFNG 135
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSG 237
N + +T +K FE ++ D S FV F AE A+ LN
Sbjct: 197 KNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 256
Query: 238 AVLG 241
G
Sbjct: 257 VAEG 260
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
+ S G + ++ D S FV F E+A +++ +G +L + V
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVG 172
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSG 237
N + +T +K FE ++ D S FV F AE A+ LN
Sbjct: 197 KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 256
Query: 238 AVLG 241
G
Sbjct: 257 VAEG 260
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
+ S G + ++ D S FV F E+A +++ +G +L + V
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVG 172
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++Y D+D TE QL LF T G VV R+C D L +A+V F ++GA AA ++
Sbjct: 21 SLYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNF--QQGADAARAI 78
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+L F V P + + +P R+ I+ N+DK++ D K ++
Sbjct: 79 --DVLNFNVVNGKPIRIMYSQRDPAL-------RKSGVGNIFIKNLDKEI---DNKALYD 126
Query: 198 SVC--GEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
+ G + ++ D Q S FV+FA E+A A++ +G +L + V P
Sbjct: 127 TFSQFGNIVSAKVAADGQGVSKGYGFVQFAEQEAAQQAIDKVNGMLLNDKQVYVGP 182
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
+Y+ +++ V + +L LF G + CR+ D + R AFV F+ +E RA +
Sbjct: 302 NLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRDASGASRGSAFVAFSSADEATRAVTEM 361
Query: 138 AGTMLGFYPVRV 149
G M G P+ V
Sbjct: 362 NGKMAGTKPLYV 373
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 60 GKRRMNCRTSNA------QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 113
G R N R +N +D+ +RT++V I Q+ L F G VV+ +I D
Sbjct: 150 GDERRNSRRNNTPPEPEVTEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKD 209
Query: 114 --PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYP-VRVLPSKTAIAPVNPTFLPRSEDE 170
+VEF DEE AL L G L P + L P+ +
Sbjct: 210 RVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGA 269
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFA 224
+Y NI VT+ D++ FE GE++++ L D + R + FV+ +
Sbjct: 270 NGAPFHRLYVGNIHFSVTEKDLQEIFEPF-GELEQVILQRDEMNPGRSKGYGFVQFVDPS 328
Query: 225 MAESAIAALNCSGAVLGSLPIRV 247
A++A+A +N G L IRV
Sbjct: 329 HAKNALAEMN--GFELAGRQIRV 349
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ RV K VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLEKE--IKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 247
+ F + GE+ R++ D Q S AFV F A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 248 SPSKTPVRP 256
+ S + P
Sbjct: 169 NWSTRKLPP 177
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 135
RTV+V + ++ + L F + G++ D R+ D N R A+VEF + E A+ AL
Sbjct: 104 RTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVESAQLAL 162
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
L GT L P+++ S V+ T LPR ++ +Y ++ +T+ +K
Sbjct: 163 GLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPS-QQNRGPMKLYIGSLHYNITEEMLKG 221
Query: 195 FFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
FE G+++ ++L+ D S FV + ++ A AL+ +G L P++V+
Sbjct: 222 IFEPF-GKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKVN 277
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 151 PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG 210
PS+T +P P D +RT++ + ++ Q D++ FF SV G+++ +RL+
Sbjct: 84 PSRTERRQKSPELSPEERD-----ARTVFVWQLSARIRQRDLEDFFTSV-GKIRDVRLIM 137
Query: 211 DYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS-----KTPVRPRAPRP 261
D + S IA+VEF ESA AL +G L +PI++ S + P PRP
Sbjct: 138 DNKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRP 195
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 135 CRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 194
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 195 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 243
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI+ +VT+ + + F S GEV L D + +R FV F+ +SA A+
Sbjct: 244 YTNVYVKNINLEVTEEEFRELF-SKYGEVTSSTLARDQEGKSRGFGFVNFSTHDSAAKAV 302
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 124
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 125 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 172
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 173 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGML 216
>gi|358332953|dbj|GAA51534.1| squamous cell carcinoma antigen recognized by T-cells 3 [Clonorchis
sinensis]
Length = 898
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
RTV+VS++D TE+ L F CG++ R+ D + +A+VEF A AL
Sbjct: 626 RTVFVSNLDYSTTEDDLRRTFEECGKLSSVRLVRDYAGRSKGYAYVEFEQASAADVALKK 685
Query: 138 AGTMLG-FYPVRVLPS-KTAIAPVNPTFLPRSEDEREMCS-----------RTIYCTNID 184
+G PS + P F+ R + R S ++ N+D
Sbjct: 686 DRQPIGPSAASEATPSTDDTMTIARPMFVSRCDPNRSKSSGFQYSAGKLEPEKLFVRNLD 745
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAAL-NCSGAVLG 241
K+VT ++ F G V +R + Y++ A+VEFA A+ A AL G ++G
Sbjct: 746 KRVTAHALEQLF-GEHGTVVSVR-IATYRNGAPKGHAYVEFANADQASRALVATDGLLVG 803
Query: 242 SLPIRVSPSKTPVR 255
S I V+ S PVR
Sbjct: 804 SKNIAVAISNPPVR 817
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSG 237
N + +T +K FE ++ D S FV F AE A+ LN
Sbjct: 197 KNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 256
Query: 238 AVLG 241
G
Sbjct: 257 VAEG 260
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
+ S G + ++ D S FV F E+A +++ +G +L + V
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVG 172
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 24/196 (12%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPNSVLRFAFVEF 125
+Q E TV+V D+ VT+ L F + +VV+ R G + FV F
Sbjct: 166 RQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKG---YGFVRF 222
Query: 126 TDE-EGARAALSLAGTMLGFYPVRVLPSKT----AIAPVNPTFLPRSEDEREMCSRTIYC 180
DE E RA + G P+R P+ + P + + E + + TI+
Sbjct: 223 ADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFV 282
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM---AESAIAALNCSG 237
+D+ VT+ D+K F GE+ +++ R FV++A AE A++ LN G
Sbjct: 283 GAVDQSVTEDDLKSVFGQF-GELVHVKIPA----GKRCGFVQYANRACAEQALSVLN--G 335
Query: 238 AVLGSLPIRVSPSKTP 253
LG IR+S ++P
Sbjct: 336 TQLGGQSIRLSWGRSP 351
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 69 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 128
N+ + + T++V +DQ VTE+ L ++F G++V +I + R FV++ +
Sbjct: 268 GNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIP----AGKRCGFVQYANR 323
Query: 129 EGARAALS-LAGTMLGFYPVRV 149
A ALS L GT LG +R+
Sbjct: 324 ACAEQALSVLNGTQLGGQSIRL 345
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
TA Q N Q ++ S +Q E ++YV D++ V+E L +F G V
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPTVSEAHLYDIFSPIGSVSSI 67
Query: 109 RICGDP--NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
R+C D + L +A+V F D E R A+ L + P++ + + +P+
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAID----QLNYTPIKGRLCRIMWSQRDPSL--- 120
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAF 220
R+ S I+ N+ + D K ++ SV G++ ++ D ++ + F
Sbjct: 121 ----RKKGSGNIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRVSP 249
E A+ AI ALN G +L I V+P
Sbjct: 174 EEEGAAKEAIDALN--GMLLNGQEIYVAP 200
>gi|190345448|gb|EDK37333.2| hypothetical protein PGUG_01431 [Meyerozyma guilliermondii ATCC
6260]
Length = 886
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 22/191 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--------VDCRICGDPNSVLRFAFVEFT 126
+V+ R V V ++D TE +L T+F G++ D R G N +AFV F
Sbjct: 685 QVMHRQVCVKNLDYYTTESELRTVFEKHGELEEISLPIKKDMRNKGHVNG--GYAFVTFK 742
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
E A AL+ G ++ V V ++ ++ NP+ D++ RTI T
Sbjct: 743 TEPSALNALNADGELIRNRKVHVYKAQPQVSIYNPS----DYDDQ----RTITITGFPDS 794
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 246
V Q ++ F G V + L H T A +EF+ +E+ +AL + +R
Sbjct: 795 VRQEQLEAFMAEHFGTVSKSFL----DHETGSAVIEFSDSETTKSALQIESTIFDGNTLR 850
Query: 247 VSPSKTPVRPR 257
V P + P+
Sbjct: 851 VGPKSSFRNPQ 861
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA- 138
++VS+ ++ ++ LF CGQ+V R RF ++EFT E A AA+
Sbjct: 595 IWVSNFPPSFSQSEVKALFEDCGQIVSARFPSLKSGRERRFCYLEFTKPESAAAAVKKHN 654
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRS-EDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
GT L + K +A P P+ E +++ R + N+D T+ +++ FE
Sbjct: 655 GTKLS-DKISGDSFKLVVAISRP---PKKIETRKQVMHRQVCVKNLDYYTTESELRTVFE 710
Query: 198 SVCGEVQRLRL--LGDYQHSTRI----AFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
GE++ + L D ++ + AFV F SA+ ALN G ++ + + V ++
Sbjct: 711 K-HGELEEISLPIKKDMRNKGHVNGGYAFVTFKTEPSALNALNADGELIRNRKVHVYKAQ 769
Query: 252 TPVRPRAP 259
V P
Sbjct: 770 PQVSIYNP 777
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 63 RMNCRTSNAQQDEVIRR-TVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLR- 119
R+N ++ Q+++ ++V D+ +VT+ L F D R+ D +
Sbjct: 130 RVNWAYASGQREDTTDHFNIFVGDLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSR 189
Query: 120 -FAFVEFTDEEGARAALS-LAGTMLGFYPVR--------------VLPSKTAIAPVNPTF 163
+ FV F +++ A++A++ L G LG +R +IA V F
Sbjct: 190 GYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWATKGANSVEDQQTSDSKSIAGVTNNF 249
Query: 164 LPRSEDEREMCS----------RTIYCTNIDKKVTQGDIKLFFESV-CGEVQRLRLLGDY 212
+ED +E + RT+Y N+ + TQ + FF ++ G ++ +R+
Sbjct: 250 ---TEDGKEKANEDAPENNPLYRTVYVGNLAHEATQDVLHRFFYALGAGAIEEVRV---- 302
Query: 213 QHSTRIAFVEFA-MAESAIAALNCSGAVLGSLPIRVS 248
QH FV+++ AE+A+A +G +LG PI+ S
Sbjct: 303 QHGKGFGFVKYSSHAEAALAIQMGNGCILGGKPIKCS 339
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 17/172 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSL 137
R+VYV +I VTE L +F + G V C++ S + FV++ + A A L L
Sbjct: 62 RSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLIRKEKS--SYGFVDYYERGSAALAILQL 119
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G + P+RV + + + ED + + I+ ++ +VT + FF
Sbjct: 120 NGRQIFGQPIRVNWAYAS---------GQREDTTDHFN--IFVGDLSAEVTDSALFAFFS 168
Query: 198 SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIR 246
R++ D + S FV F + A +A+N +G LG+ IR
Sbjct: 169 GYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIR 220
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 25/186 (13%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-----VLRFAFVEFTDEE 129
E +R +YV +D +VTE+ L +F T G VV +I D N+ + FVE+ D
Sbjct: 77 EPNKRALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPG 136
Query: 130 GA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKV 187
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 137 AAERAMTTLNGRRVHQAEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEV 186
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGS 242
++ L S G V R++ D + +AF E A AE A+A+++ G LGS
Sbjct: 187 ND-EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMD--GEWLGS 243
Query: 243 LPIRVS 248
IRV+
Sbjct: 244 RAIRVN 249
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+D V + QL +F G VV R+C D L +A+V + A AL
Sbjct: 35 SLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALE- 93
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 94 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 140
Query: 198 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
+ C G + ++ D ++ FV++ E+A AA+ +G ++ + V P
Sbjct: 141 TFCVFGNILSCKVATDASGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP 196
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D V +E+L LF G + C++ D N R + FV F + E+ +
Sbjct: 311 DKYQNTNLYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDAS 370
Query: 132 RAALSLAGTMLGFYPVRV 149
RA + M+G P+ V
Sbjct: 371 RALAEMNNKMVGSKPLYV 388
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 189
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 238
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI VT D + FE G+V L D + TR FV F E+A A+
Sbjct: 239 FTNVYVKNIAPDVTDEDFRQLFEKF-GDVTSSSLARDQEGKTRGFGFVNFTTHEAAFKAV 297
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE-EGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 120 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDVAIDNKALHDTF 167
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 168 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGML 211
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 32/200 (16%)
Query: 71 AQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDE 128
A+QD + RRT +VS++D + E+++ +F CG++ D R+ + +A+VEF DE
Sbjct: 763 AEQDPDKSRRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRLVKTIKGKSKGYAYVEFKDE 822
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK-- 186
G AL L T P+ P F+ + ED + ++ + T ++K
Sbjct: 823 LGVLEALKLDRT-----PIE----------GRPMFVSKCEDRSQKKAQFKFSTAMEKNKL 867
Query: 187 ---------VTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA-MAESAIAALNC 235
I++F E G V+ +R++ + + +A+VEF ++A A +
Sbjct: 868 FIKNLPFTCSKDALIQIFSEH--GPVKEVRMVTYRSGAPKGLAYVEFEDEQDAAKAVMKT 925
Query: 236 SGAVLGSLPIRVSPSKTPVR 255
G +G I V+ S P R
Sbjct: 926 DGLKIGDHEIEVAISNPPQR 945
>gi|169771151|ref|XP_001820045.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|317144326|ref|XP_003189588.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|121923334|sp|Q2UK72.1|PABP_ASPOR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|83767904|dbj|BAE58043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391872693|gb|EIT81794.1| polyadenylate-binding protein [Aspergillus oryzae 3.042]
Length = 765
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 120 CRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 179
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV + E A A+ ML L K + + R EM + +
Sbjct: 180 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 232
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
Y NID+ VT+ + + FE GE+ L D + +R FV F+ ESA AA++
Sbjct: 233 YIKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVD 288
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 110 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDSAIDNKALHDTF 157
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 158 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 201
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T++V ++ V + F CG+VVD R D + F VEF E A++AL +
Sbjct: 384 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 443
Query: 138 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL- 194
G L VR + + A P N + R S+T++ DK + + +I+
Sbjct: 444 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 502
Query: 195 ---FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 233
F CGE R+ + D++ +S A+++F ++S AL
Sbjct: 503 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKAL 546
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
S+T++ N+ V + DI+ FF+ CGEV +R D + + VEFA AE+A +AL
Sbjct: 383 SKTLFVGNLSFSVQRSDIEKFFQD-CGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSAL 441
Query: 234 NCSGAVL 240
+G L
Sbjct: 442 EMNGQEL 448
>gi|15229678|ref|NP_188491.1| nucleolin [Arabidopsis thaliana]
gi|122225307|sp|Q1PEP5.1|NUCL2_ARATH RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2;
Short=AtNUC-L2; AltName: Full=Protein PARALLEL LIKE 1;
Short=AtPARLL1
gi|91806437|gb|ABE65946.1| nucleolin [Arabidopsis thaliana]
gi|332642601|gb|AEE76122.1| nucleolin [Arabidopsis thaliana]
Length = 636
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 11/183 (6%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSL 137
+T++ ++ Q+ + F G+VVD R+ D S + +EF E A+ AL +
Sbjct: 384 KTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALEM 443
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G +L VR+ + P N + E + SRTIY + + +IK
Sbjct: 444 NGKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQ---SRTIYVRGFSSSLGEDEIKKELR 500
Query: 198 S---VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
S CGEV R+ + D + F + AL SG+ +G I V S
Sbjct: 501 SHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQLSGSEIGGGNIHVEES---- 556
Query: 255 RPR 257
RPR
Sbjct: 557 RPR 559
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAF 122
N +A+Q + ++YV D+D V + QL LF GQVV R+C D ++ L + +
Sbjct: 28 NGGVGDARQ--FVSTSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGY 85
Query: 123 VEFT-DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCT 181
V + E RA L T L P+R++ S +PT R+ + I+
Sbjct: 86 VNYNAAHEATRALDELNFTPLNGKPIRIMYSYR-----DPTI-------RKSGAGNIFIK 133
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAV 239
N+DK + + F S G + ++ D +R FV+F ESA +A++ +G +
Sbjct: 134 NLDKSIDNKALHDTF-STFGNILSCKVATDSLGQSRGYGFVQFDNEESAKSAIDKLNGML 192
Query: 240 LGSLPIRVSP 249
L + V P
Sbjct: 193 LNDKQVFVGP 202
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+YV ++D +++++L LF G + C++ DPN + R + FV F T EE ++A +
Sbjct: 323 NLYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEM 382
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 383 NGKMVVSKPLYV 394
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 15/196 (7%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FA 121
R R S A D+ VYV ++ + TE+ L +F G + + D + + F
Sbjct: 205 RKQERESTA--DKTRFNNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFG 262
Query: 122 FVEFTD-EEGARAALSLAGTMLG---FYPVRVLPSKTAIAPVNPTF---LPRSEDEREMC 174
FV F D ++ AR+ +L G +Y + + F L + D+ E
Sbjct: 263 FVNFDDPDDAARSVEALNGKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFEGL 322
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+ +Y N+D ++ +K F S G + +++ D +R FV F+ AE A AL
Sbjct: 323 N--LYVKNLDDSISDDKLKELF-SEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKAL 379
Query: 234 -NCSGAVLGSLPIRVS 248
+G ++ S P+ V+
Sbjct: 380 TEMNGKMVVSKPLYVA 395
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 25/191 (13%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 203 EDERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFRSEES 262
Query: 131 ARAALSLAGTMLGFYPV-----------RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
AAL L G L PV +V + A + N T +P +Y
Sbjct: 263 VTAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVP---------FHRLY 313
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSG 237
NI +T+ D++ FE GE++ ++L D +R FV+F ++ A AL +G
Sbjct: 314 VGNIHFSITESDLRNVFEPF-GELEFVQLQKDDTGRSRGYGFVQFRDSDQAREALEKMNG 372
Query: 238 AVLGSLPIRVS 248
L PIRV
Sbjct: 373 FDLAGRPIRVG 383
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+Q+ + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKVALDEKGNSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANTSIEKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N ++ +K FFE G++ +++ ++ +AF AE+A+ ALN
Sbjct: 188 KNFTEEFDDEKLKDFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 244
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ Q + E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD- 61
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F +R P + + +P+ R ++ N+D+++ I F
Sbjct: 62 ---TMNFDLIRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDRQIDNKAIYDTF- 110
Query: 198 SVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
S G + ++ L + +S FV F E+A ++ +G +L + V
Sbjct: 111 SAFGNILSCKVALDEKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVYVG 163
>gi|116309951|emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
Length = 704
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 446 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 505
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER-------EMCSRTIYCTNIDKKVTQG 190
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 506 AGHDLMGRPVRLD-----LARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 560
Query: 191 DIKLFFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 245
I+ E CGE+ R+ + DY+ S +A+++FA S A +G+ LG +
Sbjct: 561 QIRNSLEEHFGSCGEITRVSIPRDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSL 620
Query: 246 RVSPSKTPVRPR 257
V RPR
Sbjct: 621 YVD----EARPR 628
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL----GDYQHSTRIAF 220
P S + S+T++ N+ V Q +K FF+ GEV +R G+++
Sbjct: 435 PASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQE-AGEVVDIRFSTFEDGNFRG---FGH 490
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRV 247
VEFA AE+A AL +G L P+R+
Sbjct: 491 VEFATAEAAKKALELAGHDLMGRPVRL 517
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFT 126
Q E TV+V D+ VT+ L F + +VV+ R G + FV F
Sbjct: 167 QAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKG---YGFVRFA 223
Query: 127 DE-EGARAALSLAGTMLGFYPVRVLPSKT----AIAPVNPTFLPRSEDEREMCSRTIYCT 181
DE E RA + G P+R P+ + P + + E + + TI+
Sbjct: 224 DESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVG 283
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGA 238
+D+ VT+ D+K F GE+ +++ R FV++A AE A++ LN G
Sbjct: 284 AVDQSVTEDDLKSVFGQF-GELVHVKIPA----GKRCGFVQYANRACAEQALSVLN--GT 336
Query: 239 VLGSLPIRVSPSKTP 253
LG IR+S ++P
Sbjct: 337 QLGGQSIRLSWGRSP 351
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 69 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 128
N+ + + T++V +DQ VTE+ L ++F G++V +I + R FV++ +
Sbjct: 268 GNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIP----AGKRCGFVQYANR 323
Query: 129 EGARAALS-LAGTMLGFYPVRV 149
A ALS L GT LG +R+
Sbjct: 324 ACAEQALSVLNGTQLGGQSIRL 345
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 236
Query: 131 ARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSRTIYCT 181
+AAL L G L PV V ++ T + +P +P +Y
Sbjct: 237 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP---------FHRLYVG 287
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAV 239
NI +T+ D++ FE GE++ ++L D +R FV+F A A AL +G
Sbjct: 288 NIHFSITEQDLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFD 346
Query: 240 LGSLPIRVS 248
L PIRV
Sbjct: 347 LAGRPIRVG 355
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVE 222
P +EDER+ RT++ + ++ ++K FFE V G V +++ D S + +VE
Sbjct: 174 PLTEDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVAEAQIVKDRVSNRSKGVGYVE 230
Query: 223 FAMAESAIAALNCSGAVLGSLPI 245
F +S AAL +G L +P+
Sbjct: 231 FKNEDSVQAALQLTGQKLLGIPV 253
>gi|356576979|ref|XP_003556607.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 248
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T+YV ++ +V + + LF CG++VD R+ + N L F VEF E A+ AL L
Sbjct: 62 KTIYVRNLSYRVEQADMENLFKECGKIVDVRLHRNHNGRLNGFGQVEFATAEAAKKALEL 121
Query: 138 AGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDEREMC-SRTIYCTNIDKKVTQGDIKLF 195
T L P+ V L + + + S + E S T++ T D + +K
Sbjct: 122 HNTELLRRPIGVDLAEEKGEYTYSRSNWSNSFQKCERAQSPTVFVTGFDSSLPAEKLKAS 181
Query: 196 FE---SVCGEVQRLRL--LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
E CGE+QR+ + D A + F S AL+ LG P+R
Sbjct: 182 LEEHFGSCGEIQRISIPTFPDSGAVKGFAHLGFKDVVSVRKALHLDQNELGGFPLRA 238
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 131
+E +RTV+ + + + L F GQV D RI D NS A++EFTD+
Sbjct: 114 EEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 173
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
A+ L+G L P+ V+ ++ A N ++ + +Y ++ +T+
Sbjct: 174 PLAIGLSGQKLLGAPIMVMLTQ---AEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAM 230
Query: 192 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+K FE G V ++L+ D + S FV+F AE+A A+ +G L P+++
Sbjct: 231 VKAVFEPF-GTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIG 289
Query: 249 P 249
P
Sbjct: 290 P 290
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAM 225
E E RT++C + + + D++ FF V G+V +R++ D + S IA++EF
Sbjct: 111 ESAEEKDQRTVFCMQLARNIRPRDLEEFFSKV-GQVSDVRIISDRNSRRSKGIAYIEFTD 169
Query: 226 AESAIAALNCSGAVLGSLPIRV 247
+ A+ SG L PI V
Sbjct: 170 KSAVPLAIGLSGQKLLGAPIMV 191
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D V + QL +F G VV R+C D S L +A+V + A AL
Sbjct: 33 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 91
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 92 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 138
Query: 198 SVC--GEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
+ C G + ++ D S FV++ E+A AA+ +G ++ + V P
Sbjct: 139 TFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP 194
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D V +E+L LF G + C++ D N R + FV F + ++ +
Sbjct: 309 DKYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDAS 368
Query: 132 RAALSLAGTMLGFYPVRV 149
RA + M+G P+ V
Sbjct: 369 RALAEMNNKMVGNKPLYV 386
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 236
Query: 131 ARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSRTIYCT 181
+AAL L G L PV V ++ T + +P +P +Y
Sbjct: 237 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP---------FHRLYVG 287
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAV 239
NI +T+ D++ FE GE++ ++L D +R FV+F A A AL +G
Sbjct: 288 NIHFSITEQDLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFD 346
Query: 240 LGSLPIRVS 248
L PIRV
Sbjct: 347 LAGRPIRVG 355
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVE 222
P +EDER+ RT++ + ++ ++K FFE V G V +++ D S + +VE
Sbjct: 174 PLTEDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVAEAQIVKDRVSNRSKGVGYVE 230
Query: 223 FAMAESAIAALNCSGAVLGSLPI 245
F +S AAL +G L +P+
Sbjct: 231 FKNEDSVQAALQLTGQKLLGIPV 253
>gi|308809515|ref|XP_003082067.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116060534|emb|CAL55870.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 412
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
E +RRT +VS+ +T EQ+ LF CG +V+CR + S FAF+EF + A AA
Sbjct: 281 EELRRTAHVSNYPSALTVEQVKQLFSFCGTIVECR---EGPSGKNFAFIEFESNKEALAA 337
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 167
L+L G +G +RV +KT P +PR+
Sbjct: 338 LALNGMNVGGRNIRVELAKT------PRLMPRA 364
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
E RT + +N +T +K F S CG + R + AF+EF + A+A
Sbjct: 281 EELRRTAHVSNYPSALTVEQVKQLF-SFCGTIVECR---EGPSGKNFAFIEFESNKEALA 336
Query: 232 ALNCSGAVLGSLPIRVSPSKTP-VRPRA 258
AL +G +G IRV +KTP + PRA
Sbjct: 337 ALALNGMNVGGRNIRVELAKTPRLMPRA 364
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 9/176 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA-RAALSL 137
+Y+ ++ + TEE L F G V + DP + R FAFV F D E A RA L
Sbjct: 190 NIYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIGRQFAFVNFEDHEAAHRATEEL 249
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI--YCTNIDKKVTQGDIKLF 195
G LG V V + +FL + +ER + I Y N+D V ++
Sbjct: 250 NGRKLGDKEVYV--GRAQKKSERESFLRKLREERAQKYQGINLYIKNLDDTVNDEELHKL 307
Query: 196 FESV-CGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
F ++ G++ +++ D + ++R FV + E A A++ +G ++ + PI V+
Sbjct: 308 FSALPFGQITSCKVMSDDKGNSRGFGFVCYTNPEDASKAVSEMNGKMVANKPIYVA 363
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 136
++YV D++ VTE L +F G V R+C D L +A+V F + A AL +
Sbjct: 11 SLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERALDT 70
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S +P+ R+ I+ N+DK + D K +
Sbjct: 71 LNYTLIKGRPCRIMWSHR-----DPSI-------RKSGQGNIFIKNLDKSI---DNKALY 115
Query: 197 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+ S G + +++ D + +++ FV + +E+A +A+
Sbjct: 116 DTFSAFGNILSCKVVTDGKGNSKGYGFVHYETSEAADSAI 155
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 236
Query: 131 ARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSRTIYCT 181
+AAL L G L PV V ++ T + +P +P +Y
Sbjct: 237 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP---------FHRLYVG 287
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAV 239
NI +T+ D++ FE GE++ ++L D +R FV+F A A AL +G
Sbjct: 288 NIHFSITEQDLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFD 346
Query: 240 LGSLPIRVS 248
L PIRV
Sbjct: 347 LAGRPIRVG 355
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVE 222
P +EDER+ RT++ + ++ ++K FFE V G V +++ D S + +VE
Sbjct: 174 PLTEDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVAEAQIVKDRVSNRSKGVGYVE 230
Query: 223 FAMAESAIAALNCSGAVLGSLPI 245
F +S AAL +G L +P+
Sbjct: 231 FKNEDSVQAALQLTGQKLLGIPV 253
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP FAFVE+ EGA+ AL +
Sbjct: 188 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 247
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G MLG ++V + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 248 NGAMLGGRNIKV--GRPSNMPQAQQVIDEIQEEAKNYNR-IYIASIHPDLTEEDIKSVFE 304
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ V G H+ + AF+E+ +SAI A+ LG +RV S TP
Sbjct: 305 AFGPIVTCKMSQGSAAHTHKGYAFIEYQTNQSAIEAIASMNLFDLGGQLLRVGRSITP 362
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 134
+ ++YV D+D V+E QL LF GQV+ R+C D L +A+V + + + A A
Sbjct: 2 VSTSLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATRA 61
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
L L L F PV + + +P+ R+ + I+ N+D+ + +
Sbjct: 62 LEL----LNFTPVNGKAVRIMFSHRDPSI-------RKSGTANIFIKNLDRAIDNKALHD 110
Query: 195 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
F S G + ++ D S FV+F ESA A++ +G ++ + V P
Sbjct: 111 TFVSF-GNILSCKVATDSNGQSKGYGFVQFEQEESAQVAIDKVNGMLVAEKQVFVGP 166
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 176 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 235
Query: 131 ARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSRTIYCT 181
+AAL L G L PV V ++ T + +P +P +Y
Sbjct: 236 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP---------FHRLYVG 286
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAV 239
NI +T+ D++ FE GE++ ++L D +R FV+F A A AL +G
Sbjct: 287 NIHFSITEQDLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFD 345
Query: 240 LGSLPIRVS 248
L PIRV
Sbjct: 346 LAGRPIRVG 354
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVE 222
P +EDER+ RT++ + ++ ++K FFE V G V +++ D S + +VE
Sbjct: 173 PLTEDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVAEAQIVKDRVSNRSKGVGYVE 229
Query: 223 FAMAESAIAALNCSGAVLGSLPI 245
F +S AAL +G L +P+
Sbjct: 230 FKNEDSVQAALQLTGQKLLGIPV 252
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAF 122
+ NA ++ ++V D+ ++ + L F G++ DCR+ DP ++ + F
Sbjct: 46 HATNQNASVNKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGF 105
Query: 123 VEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 175
V F + A +A+ ++ G LG + R P+ + A P ++ +
Sbjct: 106 VSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANTKPLTFDEVYNQSSPTN 165
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
T+YC + +T+ ++ F S G +Q +R+ D AF+ F+ ESA A+
Sbjct: 166 CTVYCGGLTNGLTEELMQKTF-SPFGSIQEIRVFKD----KGYAFIRFSTKESATHAI 218
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 23/179 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 133
E +R +YV ++Q+VTE+ L +F T G V + +I D N+ + FVE+ D A
Sbjct: 80 EPNKRALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAAER 139
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGDI 192
A+S T+ G +R VN + + ++ + S I+ ++ +V DI
Sbjct: 140 AMS---TLNGRREIR----------VNWAYQSNTSNKEDTSSHFHIFVGDLSNEVND-DI 185
Query: 193 KLFFESVCGEVQRLRLLGDYQHS-TR----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
L S G V R++ D + TR +AF + + AE A+++++ G LGS IR
Sbjct: 186 LLQAFSAFGTVSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMD--GEWLGSRAIR 242
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ RV K VN P + + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLDKEIK--VNWATSPGNTPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 247
+ F + GE+ R++ D Q S AFV F A AE+AI A+N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 248 S 248
+
Sbjct: 169 N 169
>gi|425772940|gb|EKV11320.1| Polyadenylate-binding protein [Penicillium digitatum PHI26]
gi|425781989|gb|EKV19920.1| Polyadenylate-binding protein [Penicillium digitatum Pd1]
Length = 736
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 16/176 (9%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 116 CRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGY 175
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV + E A A+ ML L K + + R EM + I
Sbjct: 176 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNI 228
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
Y NID ++T + ++ FE+ GE+ L D +R FV +A ESA AA+
Sbjct: 229 YIKNIDLEITDDEFRVMFEAF-GEITSATLSHDQDGKSRGFGFVNYANHESAEAAV 283
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 125
+A ++ ++YV ++D VTE L LF + GQV R+C D L +A+V +
Sbjct: 34 AGDAANNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 93
Query: 126 TD-EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
+ +G RA L T++ P R++ S+ R R+ ++ N+D
Sbjct: 94 NNTADGERALEDLNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLD 141
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ + F + G + ++ D + +S FV + AE+A A+ +L
Sbjct: 142 NAIDNKALHDTF-AAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGML 197
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
+Y+ +ID ++T+++ +F G++ + D + R F FV + + E A AA++
Sbjct: 227 NIYIKNIDLEITDDEFRVMFEAFGEITSATLSHDQDGKSRGFGFVNYANHESAEAAVA 284
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
F+ R+G RR + N + + E +RTV+ + + TE + F G+V D
Sbjct: 13 FENRDG-----RRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 67
Query: 108 CRICGDPNS--VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK-----------T 154
R+ D NS ++EF D A++L+G +L PV V PS+ +
Sbjct: 68 VRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASS 127
Query: 155 AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ- 213
A V P R +Y N+ +T+ +++ FE G+++ ++L D +
Sbjct: 128 GAAVVGPY---------GAVDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMET 177
Query: 214 -HSTRIAFVEFAMAESAIAALNCSG 237
H FV+FA E A AA + +G
Sbjct: 178 GHCKGFGFVQFAHLEHAKAAQSLNG 202
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 222
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 30 PEADPERD--QRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 86
Query: 223 FAMAESAIAALNCSGAVLGSLPIRVSPSKT 252
F A S A+ SG +L P+ V PS+
Sbjct: 87 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 116
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 91/224 (40%), Gaps = 33/224 (14%)
Query: 58 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRIC 111
S G+R R+ +DE RTV+V + ++ ++L F + Q+V RI
Sbjct: 159 SPGRR---SRSPQLNEDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRIS 215
Query: 112 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV---------LPSKTAIAPVNPT 162
G V +VEF DEE + AL L G L P+ V T NP
Sbjct: 216 GRSKGV---GYVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPN 272
Query: 163 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFV 221
+P +Y NI VT+ D++ FE GE++ ++L D +R FV
Sbjct: 273 SVP---------FHRLYVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFV 322
Query: 222 EFAMAESAIAAL-NCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
+F A A AL +G L PIRV P + +H
Sbjct: 323 QFRDATQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLMH 366
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 39/217 (17%)
Query: 53 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 112
+R+ Y G +T DE RRTV+V + ++ +L F G VVD +I
Sbjct: 210 RRHSYRGGDGGNKRKTPEPTDDERDRRTVFVQQLAARLRSRELRDFFEQVGPVVDAQIVK 269
Query: 113 D--PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
D +VEF DEE + A+ L G L P+ IA + +E E
Sbjct: 270 DRVSGRSKGVGYVEFKDEESVQKAIGLTGQKLLGIPI--------IAQL-------TEAE 314
Query: 171 REMCSRT---------------IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 215
+ +RT +Y NI +T+ D+K FE GE++ +L +
Sbjct: 315 KNRQARTTEGTATQSNGVPFHRLYVGNIHFSITEADLKNVFEPF-GELEFAQLQKEENGR 373
Query: 216 TR----IAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
++ + F++ A A+ A+ +N G L PIRV
Sbjct: 374 SKGYGFVQFIDPAQAKEALEKMN--GFELAGRPIRVG 408
>gi|331219745|ref|XP_003322549.1| hypothetical protein PGTG_04086 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 680
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 136
R T+YV++ + +E + + F G + D R S RF +++FT A AAL
Sbjct: 320 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 379
Query: 137 LAGTMLGFYPVRVLPS-KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
L + + V P K ++ +PT ++ + + +Y T + K V + D++
Sbjct: 380 L-------HNLEVSPKQKMSVLISDPT-RKQTRSDNHANEKELYITCLSKYVQEDDLRKL 431
Query: 196 FESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 250
F S GE++ +R++ D HS AFVEF SA AAL+ + L I V+ S
Sbjct: 432 F-SQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSMNNVELKKRRIGVTIS 486
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FA 121
R R+ N + + +Y++ + + V E+ L LF G++ R+ D + FA
Sbjct: 400 RKQTRSDNHANE----KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFA 455
Query: 122 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKT---AIAPVNPTF-----LPRSEDEREM 173
FVEF +E A+AALS+ L + V S ++A N TF L + D R
Sbjct: 456 FVEFQNEMSAKAALSMNNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR-- 513
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 229
SR++ +NI + + I+ FE G+V + + A VEFA+ + A
Sbjct: 514 -SRSVRVSNIAEGTQEALIQQAFEQF-GKVLKTITYPEKNE----ALVEFALEKDA 563
>gi|225449617|ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 56 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGD 113
G +G + + S++Q++ VYV I TE+ + + F +CG + VDC + +
Sbjct: 159 GGEKGVVKETAQISDSQENGDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPE 218
Query: 114 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
A + F E A+ AL+L G +G +++ P KT A + F P EM
Sbjct: 219 SGKFRGIAIISFKTEAAAKRALALDGADMGGLFLKIQPYKTTRANKSSDFAP------EM 272
Query: 174 CS--RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
IY N+ +T+ +++ FF R + + Q A V+F+ S
Sbjct: 273 VEGYNRIYVGNLPWDITEDEVRKFFSRCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTM 332
Query: 232 ALNCSGAVLGSLPIRV 247
AL ++ P ++
Sbjct: 333 ALKLDQEIVCGRPAKI 348
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++VTE LA LF+ G VV+C + D + + FVEF E+ A A+ +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKI 71
Query: 138 AGTMLGF-YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ F PVRV + S + ++ N+D ++ D KL +
Sbjct: 72 LNMIKLFGKPVRVNKAS-------------SHQKNLDVGANLFIGNLDPEI---DEKLLY 115
Query: 197 ESVCG-----EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
++ + ++ D +S AF+ ++ E+A AAL +G L + PI +S
Sbjct: 116 DTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITIS 173
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++VTE LA LF+ G VV+C + D + + FVEF E+ A A+ +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKI 71
Query: 138 AGTMLGF-YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ F PVRV + S + ++ N+D ++ D KL +
Sbjct: 72 LNMIKLFGKPVRVNKAS-------------SHQKNLDVGANLFIGNLDPEI---DEKLLY 115
Query: 197 ESVCG-----EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
++ + ++ D +S AF+ ++ E+A AAL +G L + PI +S
Sbjct: 116 DTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITIS 173
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL 135
+RTV+ I + E + F G+V D R+ D NS ++EF D A+
Sbjct: 225 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284
Query: 136 SLAGTMLGFYPVRVLPSKT------AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 189
+L+G L PV V PS+ + VN P S +R +Y N+ +T+
Sbjct: 285 ALSGQPLLGQPVMVKPSEAEKNLVQSTTTVNAGSGPYS-----GGARRLYVGNLHFNITE 339
Query: 190 GDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAV-LGSLPIRV 247
++ FE G V+ ++L L + H FV+FA E A ALN +G V + PI+V
Sbjct: 340 DQLRQVFEPF-GIVELVQLPLDETGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKV 398
Query: 248 S 248
S
Sbjct: 399 S 399
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCG-QVVDCRICGDPNS-VLRFAFVEFTDEEGAR 132
E+ + T+YV +ID V+E+ L LF + G Q+ +I D N +AF+E+ D A
Sbjct: 153 ELSKTTLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAE 212
Query: 133 AAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
AL +L GT+L YP+++ T+ R++ R + T++ ++ ++
Sbjct: 213 NALQALNGTVLANYPLKI------------TWAYRTQQSRSGENFTLFVGDLSPEIDDDS 260
Query: 192 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
+ F VQ ++ D + S FV F + A L +G LG IR++
Sbjct: 261 LAATFSKFPSFVQ-ANVMWDMKTGRSRGYGFVSFQNNQDAETVLQTMNGMSLGGRSIRLN 319
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEF---AMA 226
RE+ T+Y NID V++ ++ F S+ ++Q +++L D + AF+E+ A
Sbjct: 152 RELSKTTLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKA 211
Query: 227 ESAIAALNCSGAVLGSLPIRVS 248
E+A+ ALN G VL + P++++
Sbjct: 212 ENALQALN--GTVLANYPLKIT 231
>gi|401424247|ref|XP_003876609.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492852|emb|CBZ28130.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 495
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 131
+QDE+ RRT+YVS + + + L L T G V RIC FAFVE EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPV 159
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|146090675|ref|XP_001466305.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398017412|ref|XP_003861893.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070667|emb|CAM69016.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500121|emb|CBZ35196.1| hypothetical protein, conserved [Leishmania donovani]
Length = 495
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 131
+QDE+ RRT+YVS + + + L L T G V RIC FAFVE EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPV 159
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|406859894|gb|EKD12956.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1039
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 20/194 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T+YV++ E L LF CG++ R NS RF ++ F + A AA L
Sbjct: 654 TLYVTNYPPTADENYLRKLFKECGEIFSIRWPSLKVNSHRRFCYISFRTVDAAAAATKLD 713
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDIKLFFE 197
G LG + L +K + P R + + + R I+ T+ID +T +++ F
Sbjct: 714 GQSLG--GMYKLVAKHSDPP------NRQKRQGALAEGREIHVTSIDPSITPDELEKLF- 764
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVS-------- 248
S G+V+R+ LL ++ AFV FA E A AAL+ L S + V
Sbjct: 765 SKYGKVERVNLLTKVSGESKGAAFVSFATKEGAAAALDLDKTKLKSRVLNVEMAGATNFK 824
Query: 249 PSKTPVRPRAPRPP 262
P+ T R+ P
Sbjct: 825 PTATTFSKRSSASP 838
Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 72/183 (39%), Gaps = 41/183 (22%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 134
R ++V+ ID +T ++L LF G+V + ++ G+ AFV F +EGA AA
Sbjct: 744 REIHVTSIDPSITPDELEKLFSKYGKVERVNLLTKVSGESKGA---AFVSFATKEGAAAA 800
Query: 135 LSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDER---------------------- 171
L L T L + V + T P TF RS
Sbjct: 801 LDLDKTKLKSRVLNVEMAGATNFKPTATTFSKRSSASPGPAGDYAMSPSPAAAESLNTHA 860
Query: 172 ------EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
+ +RT+ NI V ++ ES GE+ +L L D+Q A +E+
Sbjct: 861 QHTSGGGISNRTLCLMNIPDTVNDARVRALAESY-GEILKLSLRLDHQG----AIIEYTD 915
Query: 226 AES 228
A S
Sbjct: 916 AAS 918
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G V +I D N L + F+E+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + + + + S I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSNEVND 207
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
++ L S CG V R++ D + +AF E A AE A+++++ G LGS
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 264
Query: 245 IR 246
IR
Sbjct: 265 IR 266
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 29/192 (15%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ ++L F G V + +I D N +VEF +E+
Sbjct: 173 EDERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 232
Query: 131 ARAALSLAGTMLGFYPVRVL------------PSKTAIAPVNPTFLPRSEDEREMCSRTI 178
+AAL L G L PV V P T P + F +
Sbjct: 233 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRNPDATGNHPNSIPF------------HRL 280
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCS 236
Y NI +T+ D++ FE GE++ ++L D +R FV+F A A AL +
Sbjct: 281 YVGNIHFSITEQDLQNVFEPF-GELEFVQLQKDDTGRSRGYGFVQFRDATQAREALEKMN 339
Query: 237 GAVLGSLPIRVS 248
G L PIRV
Sbjct: 340 GFDLAGRPIRVG 351
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVE 222
P +EDER+ RT++ + ++ ++K FFE V G V +++ D S + +VE
Sbjct: 170 PLTEDERDR--RTVFVQQLAARLRTKELKEFFEKV-GPVAEAQIVKDRVSNRSKGVGYVE 226
Query: 223 FAMAESAIAALNCSGAVLGSLPI 245
F +S AAL +G L +P+
Sbjct: 227 FKNEDSVQAALQLTGQKLLGIPV 249
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGAR 132
+ + ++YV D++ V+E QL +F GQVV R+C D L +++V + + + A
Sbjct: 20 QFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDAT 79
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL L L F V P + + +P+ R+ + I+ N+DK + +
Sbjct: 80 RALEL----LNFTGVNGKPIRIMFSHRDPSI-------RKSGTANIFIKNLDKSIDNKAL 128
Query: 193 KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
F + G + ++ D S FV+F ESA A+ +G +L + V P
Sbjct: 129 HDTF-AAFGNILSCKVATDASGQSKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFVGP 186
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 123 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 182
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV + E A A+ ML L K + + R EM + +
Sbjct: 183 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 235
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
Y NID++VT + + FE GE+ L D + +R FV F+ +SA AA++
Sbjct: 236 YIKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVD 291
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 204
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G V +I D N L + F+E+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + + + + S I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSNEVND 207
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
++ L S CG V R++ D + +AF E A AE A+++++ G LGS
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 264
Query: 245 IR 246
IR
Sbjct: 265 IR 266
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 134
+ ++YV D++ V+E QL +F GQVV R+C D L +A+V + + + A A
Sbjct: 22 VSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRA 81
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
L L L F V P + + +P+ R+ + I+ N+DK + +
Sbjct: 82 LEL----LNFNAVNGKPIRIMFSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHD 130
Query: 195 FFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
F + G + ++ D S FV+F ESA A+ +G +L + V P
Sbjct: 131 TF-AAFGTILSCKVATDPSGQSKGYGFVQFEQEESAQTAIEKVNGMLLNDKQVFVGP 186
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSL 137
+Y+ ++D + +E+L +F G +V C++ DP R + FV F+ +E RA +
Sbjct: 307 NLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFSSPDEATRAVTEM 366
Query: 138 AGTMLGFYPVRV----------------LPSKTAIAPVNPTFLP 165
G M+G P+ V +T + P PT LP
Sbjct: 367 NGKMVGSKPLYVALAQRKEERRNRLQAAFAQRTPVGPAVPTSLP 410
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEG 130
++ + ++YV D++ V + QL LF GQVV R+C D L + +V FT+ ++
Sbjct: 27 NQFVTTSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDA 86
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
ARA L T + +RV+ S R R+ + I+ N+DK +
Sbjct: 87 ARALDVLNFTPMNNKSIRVMYSH------------RDPSSRKSGTANIFIKNLDKTIDHK 134
Query: 191 DIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 240
+ F S G++ ++ D S FV+F +SA A++ +L
Sbjct: 135 ALHDTFSSF-GQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGML 184
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D +T+E+L +F G + +I DPN V R + FV F T EE +RA +
Sbjct: 316 NLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEM 375
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 376 NGKMIVSKPLYV 387
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 73 QDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD 127
+D V+ +T VYV ++ + TE+ L F G + + D + + F FV F +
Sbjct: 201 RDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFEN 260
Query: 128 -EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR---------- 176
E+ A+A +L G + V ++ +SE E+E+ R
Sbjct: 261 AEDAAKAVEALNGKKVDDKEWYVGKAQK-----------KSEREQELKGRFEQTVKESVV 309
Query: 177 ------TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 229
+Y N+D +T +K F S G + +++ D +R FV F+ E A
Sbjct: 310 DKFQGLNLYLKNLDDSITDEKLKEMF-SEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEA 368
Query: 230 IAALN-CSGAVLGSLPIRVS 248
AL +G ++ S P+ V+
Sbjct: 369 SRALGEMNGKMIVSKPLYVA 388
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 28/179 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 137
T+Y+ ++DQ+VT++ + LF+ CG VV+ I D S + FVEF EE A A+ +
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKI 79
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKL 194
M+ Y P++V + S+D+R + ++ N+D ++ D K
Sbjct: 80 M-HMIKLYGKPIKVNKA--------------SQDKRTQEVGANLFIGNLDTEI---DEKT 121
Query: 195 FFE--SVCGEVQRLRLLGDYQH--STRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
+E S G + +++ + + S FV + ES+ AL +G LG+ IRV
Sbjct: 122 LYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRVE 180
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEG 130
+E RTV+V + ++ + L F + G++ D R+ D N R A+VEF + E
Sbjct: 74 EERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVES 132
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
A+ AL L GT L P+++ S +N ++ +Y ++ +T+
Sbjct: 133 AQLALGLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKPTQQNRGPMKLYIGSLHYNITEE 192
Query: 191 DIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRV 247
+K FE G++ ++L+ D S FV +A ++ A AL+ +G L P++V
Sbjct: 193 MLKGIFEPF-GKIDDIKLIKDPATGRSQGYGFVTYANSDDAKKALDQLNGFELAGRPMKV 251
Query: 248 S 248
+
Sbjct: 252 N 252
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 161 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRI 218
P P D +RT++ + ++ Q D++ FF SV G+++ +RL+ D + S I
Sbjct: 69 PELTPEERD-----ARTVFVWQLSARIRQRDLEDFFTSV-GKIRDVRLIMDNKTKRSKGI 122
Query: 219 AFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR-----PRAPRP 261
A+VEF ESA AL +G L +PI++ S P P+P
Sbjct: 123 AYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKP 170
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D VT+ QL LF GQVV R+C D ++ L + +V +++ + A AL +
Sbjct: 32 SLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 91
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ I+ N+DK + + F
Sbjct: 92 ----LNFTPLNNKPLRIMYSHRDPSI-------RKSGMANIFIKNLDKTIDHKALHDTFS 140
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D S FV+F E+A A++ +L
Sbjct: 141 SF-GNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGML 183
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D V +E+L LF G + C++ DP+ + R + FV F T EE +RA L
Sbjct: 313 NLYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAEL 372
Query: 138 AGTMLGFYPVRVLPSK 153
G M+ P+ V P++
Sbjct: 373 NGKMVVSKPLYVAPAQ 388
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 8/187 (4%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALS 136
+YV ++ + T+E L ++F G + + D + + F FV F + ++ A+A +
Sbjct: 210 NNIYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVNFENVDDAAKAVEA 269
Query: 137 LAGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L G +Y + + F E + + +Y N+D V +K
Sbjct: 270 LNGKKFDDKEWYVGKAQKKSERELELKGRFEQSLESVEKYQAVNLYIKNLDDSVNDEKLK 329
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSK 251
F S G + +++ D +R FV F+ E A AL +G ++ S P+ V+P++
Sbjct: 330 ELF-SDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAELNGKMVVSKPLYVAPAQ 388
Query: 252 TPVRPRA 258
RA
Sbjct: 389 RKEERRA 395
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP FAFVE+ EGA+ AL +
Sbjct: 162 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 221
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G MLG ++V + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 222 NGAMLGGRNIKV--GRPSNMPQAQQVIDEIQEEAKSYNR-IYIASIHPDLTEEDIKSVFE 278
Query: 198 SVCGEVQRLRL-LGDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + ++ G+ H+ + F+E+ +SAI A+ LG +RV S TP
Sbjct: 279 AF-GPIMTCKMSQGNAVHTHKGYGFIEYQTNQSAIEAIASMNLFDLGGQLLRVGRSITP 336
>gi|408395605|gb|EKJ74783.1| hypothetical protein FPSE_05031 [Fusarium pseudograminearum CS3096]
Length = 749
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDETGASKGY 189
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 238
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI VT+ D + FE G+V L D + +R FV F ESA A+
Sbjct: 239 FTNVYVKNIAADVTEDDFRQLFEKY-GDVTSSSLARDQEGKSRGFGFVNFTTHESAFKAV 297
Query: 234 N 234
+
Sbjct: 298 D 298
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 85/209 (40%), Gaps = 30/209 (14%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFT 126
+DE RTV+V + ++ ++L F + Q+V RI G V +VEF
Sbjct: 167 EDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGV---GYVEFK 223
Query: 127 DEEGARAALSLAGTMLGFYPVRV---------LPSKTAIAPVNPTFLPRSEDEREMCSRT 177
DEE + AL L G L P+ V T NP +P
Sbjct: 224 DEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSVP---------FHR 274
Query: 178 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NC 235
+Y NI VT+ D++ FE GE++ ++L D +R FV+F A A AL
Sbjct: 275 LYVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKM 333
Query: 236 SGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
+G L PIRV P + +H
Sbjct: 334 NGFDLAGRPIRVGLGNDKFTPESTANLMH 362
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFA 224
+EDER+ SRT++ + ++ +K FFE G V +++ D S + +VEF
Sbjct: 166 NEDERD--SRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFK 223
Query: 225 MAESAIAALNCSGAVLGSLPI 245
E+ AL +G L +PI
Sbjct: 224 DEETVQKALQLTGKPLAGIPI 244
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 123 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 182
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV + E A A+ ML L K + + R EM + +
Sbjct: 183 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 235
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
Y NID++VT + + FE GE+ L D + +R FV F+ +SA AA++
Sbjct: 236 YIKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVD 291
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 204
>gi|449487626|ref|XP_004157720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203535
[Cucumis sativus]
Length = 936
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
+ ++RT+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFXFCGTVVECTITDSKH----FAYIEYSKPEEATAA 389
Query: 135 LSLAGTMLGFYPVRV-----LPSKTAIAPVNPTFLPRS 167
L+L +G P+ V LP K A A NP+ S
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSLASSS 425
Score = 38.1 bits (87), Expect = 4.0, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+ +N+ +T +K F CG V + D +H A++E++ E A AAL
Sbjct: 338 RTLQVSNLSPLLTVEQLKQLF-XFCGTVVECTIT-DSKH---FAYIEYSKPEEATAALAL 392
Query: 236 SGAVLGSLPIRVSPSKT-PVRPRAPRPPL 263
+ +G P+ V +K+ P +P A P L
Sbjct: 393 NNMDVGGRPLNVEMAKSLPQKPAAANPSL 421
>gi|194753367|ref|XP_001958985.1| GF12652 [Drosophila ananassae]
gi|190620283|gb|EDV35807.1| GF12652 [Drosophila ananassae]
Length = 639
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKVATDEKANSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +K FFE G++ +++ ++ +AF AE+A+ ALN
Sbjct: 188 KNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 244
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL-S 136
++YV D+ Q + E L F + G V+ R+C D S L +A+V F A AL +
Sbjct: 3 SLYVGDLHQDINESNLFDKFSSAGPVLSIRVCRDVMSRRSLGYAYVNFQQPADAERALDT 62
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ +L P+R++ S+ R R ++ N+DK + I F
Sbjct: 63 MNFDLLRNKPIRIMWSQ------------RDPSLRRSGVGNVFIKNLDKTIDNKAIYDTF 110
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 -SAFGNILSCKVATDEKANSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|389593175|ref|XP_003721841.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438343|emb|CBZ12095.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 495
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 131
+QDE+ RRT+YVS + + + L L T G V RIC FAFVE EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPV 159
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 130
E +R +YV +DQ+VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 86 EPNKRALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 145
Query: 131 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 188
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 146 AERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVN 195
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 243
++ F S G V R++ D + +AF + A A+ A+ +++ G LGS
Sbjct: 196 DEILQQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMD--GEWLGSR 252
Query: 244 PIR 246
IR
Sbjct: 253 AIR 255
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D V + QL +F G VV R+C D S L +A+V + A AL
Sbjct: 126 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 184
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
ML F P+ P + + +P+ R+ + I+ N+DK + D K +
Sbjct: 185 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALHD 231
Query: 198 SVC--GEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
+ C G + ++ D S FV++ E+A AA+ +G ++ + V P
Sbjct: 232 TFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP 287
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +Y+ ++D V +E+L LF G + C++ D N R + FV F + ++ +
Sbjct: 402 DKYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDAS 461
Query: 132 RAALSLAGTMLGFYPVRV 149
RA + M+G P+ V
Sbjct: 462 RALAEMNNKMVGNKPLYV 479
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAF 122
+ + A ++V ++YV ++D V+E L LF G V R+C D + L +A+
Sbjct: 33 SSESQQAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAY 92
Query: 123 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
V F+D E + A+ L + P++ + + +P+ R+ I+ N
Sbjct: 93 VNFSDHEAGKQAIE----KLNYTPIKGKLCRIMWSQRDPSL-------RKKGHGNIFIKN 141
Query: 183 IDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALNCS 236
+++ + D K F+ SV G + ++ D ++ + F E + A AI ALN
Sbjct: 142 LNQDI---DNKALFDTFSVFGNILSSKIATDETGKSKGFGFVHFEEESAANEAIDALN-- 196
Query: 237 GAVLGSLPIRVSPSKT 252
G +L I V+P T
Sbjct: 197 GMLLNGQEIYVAPHLT 212
>gi|320580160|gb|EFW94383.1| Splicing factor [Ogataea parapolymorpha DL-1]
Length = 295
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 79 RTVYVSDID-QQVTEEQLATLFLTCGQVVDCRI---CGDPNSVLR--FAFVEFTDEEGAR 132
R VYVSD+D +V E++L+ +F G + RI + + L FAF+ F A
Sbjct: 116 RQVYVSDLDFYKVDEDKLSEIFSKYGDIEMIRIPVRRDEKSKKLNNGFAFISFRSSSDAV 175
Query: 133 AALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 189
+L L G +L P+++ P K ++ + R+ RTI N+D K+
Sbjct: 176 KSLELDGKLLAGRPMKIELATPKKKKVSVLGTGKFDRA--------RTISVLNVDDKINT 227
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF-AMAESAIAALNCSGAVLGSLPIRVS 248
+K FE + G V ++ L Q A +EF + S +A +G +G +R+
Sbjct: 228 ETLKAIFEEI-GPVTQIEL----QPENNAALIEFETVRSSGMADFKFNGRKIGDTTVRIG 282
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 30/193 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAAL-SL 137
T++V++ + T E L +F G V+ R+ N RF +VE++ E+ A +A+ +L
Sbjct: 22 TLWVANYPPEKTAEDLKKIFGQHGGVLAVRLPSLKTNVQRRFCYVEYSSEQDAASAVKAL 81
Query: 138 AGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---SRTIYCTNID-KKVTQ 189
G + G + + V S P + ER+ R +Y +++D KV +
Sbjct: 82 DGHTIHGKTGDFKLTVKISN-----------PEARQERKGALEEGRQVYVSDLDFYKVDE 130
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
+ F S G+++ +R+ ++ AF+ F + A+ +L G +L P
Sbjct: 131 DKLSEIF-SKYGDIEMIRIPVRRDEKSKKLNNGFAFISFRSSSDAVKSLELDGKLLAGRP 189
Query: 245 IRV---SPSKTPV 254
+++ +P K V
Sbjct: 190 MKIELATPKKKKV 202
>gi|356537017|ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 502
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 48 NTAFQKRNGYSQGKRRMNCRTSNAQQDEVI------RRTVYVSDIDQQVTEEQLATLFLT 101
N A +K NG + G +++ + D ++ +Y+ ++D +TE L F +
Sbjct: 154 NNAIEKLNGSTVGDKQIYVGKFVRKGDRILPGYDAKYTNLYIKNLDSDITEALLQEKFSS 213
Query: 102 CGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN 160
G+++ I D N + + FAFV + + + AR A+ A L F + ++
Sbjct: 214 FGKIISLVISKDDNGLSKGFAFVNYENPDDARKAME-AMNGLKFGSKNLYVARAQKKAER 272
Query: 161 PTFLPRSEDER------EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH 214
L R +E+ + + +Y NID VT +++ F S CG + ++++ D +
Sbjct: 273 EQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRDLFSS-CGTITSVKVMRDDKG 331
Query: 215 -STRIAFVEFAMAESAIAAL 233
S FV F+ E A A+
Sbjct: 332 ISKGFGFVCFSNPEEANKAV 351
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
+YV +ID VT+++L LF +CG + ++ D + + F FV F++ EE +A S
Sbjct: 295 NLYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVRSF 354
Query: 138 AGTMLGFYPVRV 149
G M P+ +
Sbjct: 355 NGCMFHRKPLYI 366
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T++V ++ V + F CG+VVD R D + F VEF E A++AL +
Sbjct: 364 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 423
Query: 138 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL- 194
G L VR + + A P N + R S+T++ DK + + +I+
Sbjct: 424 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 482
Query: 195 ---FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 233
F CGE R+ + D++ +S A+++F ++S AL
Sbjct: 483 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKAL 526
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
S+T++ N+ V + DI+ FF+ CGEV +R D + + VEFA AE+A +AL
Sbjct: 363 SKTLFVGNLSFSVQRSDIEKFFQD-CGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSAL 421
Query: 234 NCSGAVL 240
+G L
Sbjct: 422 EMNGQEL 428
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 65 NCRTSNA--QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRF 120
N +NA ++ + ++YV D+DQ V + QL LF GQVV R+C D + L +
Sbjct: 19 NGGVANAPNNANQFVTTSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGY 78
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 180
+V F++ + A AL + L F P+ + + +P+ R+ + I+
Sbjct: 79 GYVNFSNPQDAARALDV----LNFTPLNNRSIRIMYSHRDPSL-------RKSGTANIFI 127
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALNCSGAV 239
N+DK + + F S G + ++ D S FV+F E+A A++ +
Sbjct: 128 KNLDKAIDHKALHDTFSSF-GLILSCKIATDASGLSKGYGFVQFDNEEAAQNAIDKLNGM 186
Query: 240 L 240
L
Sbjct: 187 L 187
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+ +D +R++ +++ ++D+ + + L F + G ++ C+I D + + + + FV+F
Sbjct: 111 SHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQF 170
Query: 126 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT----IYC 180
+EE A+ A+ L G ++ V V FL R +D S+T +Y
Sbjct: 171 DNEEAAQNAIDKLNGMLINDKQVYV-----------GHFL-RKQDRENALSKTKFNNVYV 218
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N+ + T ++ + F G + ++ D +R FV F + A A+
Sbjct: 219 KNLSESTTDEELMINF-GEYGTITSALIMRDADGKSRCFGFVNFENPDDAAKAV 271
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D +++E+L +F G + C++ DP + R + FV F T EE RA +
Sbjct: 318 NLYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEM 377
Query: 138 AGTMLGFYPVRV 149
G M P+ V
Sbjct: 378 NGKMFAGKPLYV 389
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 27/201 (13%)
Query: 58 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 117
S + N ++ E+ R+ +YV + + + E+ L F G V +I D N
Sbjct: 23 SDSDKEFNPASATNGGREISRKVLYVGGLPKSINEDALNEKFSASGPVFSVKILNDKNKQ 82
Query: 118 -LRFAFVEFTDEEGARAAL------SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 170
+AFVEF DE GA AAL S +ML K A + TF +
Sbjct: 83 GFNYAFVEFVDEAGAAAALQEFNGSSFENSML----------KINYAYQSSTF--NATQN 130
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAM 225
+ + I+ ++ +V + FF S +++ ++ D Q S + F A
Sbjct: 131 SDDPTYNIFVGDLSPEVDDESLHKFF-SAFESLKQAHVMWDMQTSRSRGYGFVTFANLAD 189
Query: 226 AESAIAALNCSGAVLGSLPIR 246
AE+A++ +N G VL IR
Sbjct: 190 AETALSTMN--GKVLNGRAIR 208
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T++V ++ V + F CG+VVD R D + F VEF E A++AL +
Sbjct: 376 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 435
Query: 138 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL- 194
G L VR + + A P N + R S+T++ DK + + +I+
Sbjct: 436 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 494
Query: 195 ---FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 233
F CGE R+ + D++ +S A+++F ++S AL
Sbjct: 495 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKAL 538
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
S+T++ N+ V + DI+ FF+ CGEV +R D + + VEFA AE+A +AL
Sbjct: 375 SKTLFVGNLSFSVQRSDIEKFFQD-CGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSAL 433
Query: 234 NCSGAVL 240
+G L
Sbjct: 434 EMNGQEL 440
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 42 KVLCLFNTAFQKRNGYSQGKRRMNCRTSNA---QQDEVIRRTVYVSDIDQQVTEEQLATL 98
+VL +N G + R+N T +A + D+ T++V D+ VT+ L
Sbjct: 117 RVLQTYNGTIMPNGGQN---FRLNWATLSAGERRHDDSPDHTIFVGDLAADVTDYLLQET 173
Query: 99 F------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 151
F + +VV R+ G + FV F DE E RA + G + P+R+ P
Sbjct: 174 FRARYPSIKGAKVVIDRLTG---RTKGYGFVRFGDESEQVRAMTEMQGVLCSTRPMRIGP 230
Query: 152 SK-----TAIAPVNPTFLPR-SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQR 205
+ T P P+ +++E + + TI+ N+D VT ++ F GE+
Sbjct: 231 ASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGHY-GELVH 289
Query: 206 LRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA 258
+++ R FV+FA AE A+ LN G +LG +R+S ++P +A
Sbjct: 290 VKIPA----GKRCGFVQFADRSCAEEALRVLN--GTLLGGQNVRLSWGRSPSNKQA 339
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFT 126
+ A+ DE+ +RT+YV ++ + TE L LF G VVD ++ D S + F+ +
Sbjct: 36 SEQAKDDEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSHYCFITYE 95
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
GA+ AL+ + V +P K VN P + I+ ++ ++
Sbjct: 96 THVGAQRALAA----MNGRDVYKMPLK-----VNWATRPDGIKKDTSKDHHIFVGDLAQE 146
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 233
+T D++ FE G++ R++ D Q S FV F ESA A+
Sbjct: 147 LTTLDLQNEFEKF-GKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAI 194
>gi|449433175|ref|XP_004134373.1| PREDICTED: uncharacterized protein LOC101203535 [Cucumis sativus]
Length = 936
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
+ ++RT+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFSFCGTVVECTITDSKH----FAYIEYSKPEEATAA 389
Query: 135 LSLAGTMLGFYPVRV-----LPSKTAIAPVNPTFLPRS 167
L+L +G P+ V LP K A A NP+ S
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSLASSS 425
Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
RT+ +N+ +T +K F S CG V + D +H A++E++ E A AAL
Sbjct: 338 RTLQVSNLSPLLTVEQLKQLF-SFCGTVVECTIT-DSKH---FAYIEYSKPEEATAALAL 392
Query: 236 SGAVLGSLPIRVSPSKT-PVRPRAPRPPL 263
+ +G P+ V +K+ P +P A P L
Sbjct: 393 NNMDVGGRPLNVEMAKSLPQKPAAANPSL 421
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNS--VLRFAFVEFTDE- 128
Q E T++V D+ +VT+ L+ F G V ++ D + + FV F DE
Sbjct: 148 QTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADEN 207
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSE----DEREMCSRTIYCTNI 183
E RA + G P+R+ P+ A P+ P ++ + + + TI+ +
Sbjct: 208 EQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGL 267
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGS 242
D VT ++K F GE+ +++ R FV++A SA AL+ +G LG
Sbjct: 268 DANVTDDELKSIF-GQFGELLHVKIP----PGKRCGFVQYANKASAEHALSVLNGTQLGG 322
Query: 243 LPIRVSPSKTPVR 255
IR+S ++P +
Sbjct: 323 QSIRLSWGRSPNK 335
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 123
N + +NA ++ T++V +D VT+++L ++F G+++ +I P R FV
Sbjct: 245 QNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIP--PGK--RCGFV 300
Query: 124 EFTDEEGARAALS-LAGTMLGFYPVRV 149
++ ++ A ALS L GT LG +R+
Sbjct: 301 QYANKASAEHALSVLNGTQLGGQSIRL 327
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----Q 104
++RNG RR++ +T + +D+ +RT++V I Q+ L + F T G Q
Sbjct: 153 RRRNGADD--RRLSRKTPEPEVTEDDRDKRTIFVQQISQRAETRHLRSFFETVGPVVEAQ 210
Query: 105 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYP-VRVLPSKTAIAPVNPTF 163
+V R+ G V +VEF +EE AL L G L P + L P+
Sbjct: 211 IVKDRVTGRSKGV---GYVEFKEEESVPKALELTGQKLKGVPIIAQLTEAEKNRAARPSE 267
Query: 164 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR------ 217
+ +Y NI VT+ D++ FE GE++++ L D + R
Sbjct: 268 GGAAPGANGAPFHRLYVGNIHFSVTEKDLQEIFEP-YGELEQVILQRDELNPGRSKGYGF 326
Query: 218 IAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+ FV+ A+ A+A +N G L IRV
Sbjct: 327 VQFVDPTHAKDALAEMN--GFELAGRQIRV 354
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +YV +D +VTE+ L +F T G V +I D NS L + FVE+ D A R
Sbjct: 96 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 155
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + S ++ + + I+ ++ +V +
Sbjct: 156 AMATLNGRRVHQSEIR----------VNWAYQSNSNNKEDTSNHFHIFVGDLSNEVND-E 204
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ L S G V R++ D + +AF E + AE A+++++ G LGS IR
Sbjct: 205 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMD--GEWLGSRAIR 262
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 16/176 (9%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 116 CRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGY 175
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV + E A A+ ML L K + + R EM + I
Sbjct: 176 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNI 228
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
Y NID ++T + + FE+ GE+ L D +R FV +A ESA AA+
Sbjct: 229 YIKNIDLEITDDEFRTMFEAF-GEITSATLSHDQDGKSRGFGFVNYANHESAEAAV 283
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 125
+A ++ ++YV ++D VTE L LF + GQV R+C D L +A+V +
Sbjct: 34 AGDAANNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 93
Query: 126 TD-EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
+ +G RA L T++ P R++ S+ R R+ ++ N+D
Sbjct: 94 NNTADGERALEDLNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLD 141
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ + F + G + ++ D + +S FV + AE+A A+ +L
Sbjct: 142 NAIDNKALHDTF-AAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGML 197
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
+Y+ +ID ++T+++ T+F G++ + D + R F FV + + E A AA++
Sbjct: 227 NIYIKNIDLEITDDEFRTMFEAFGEITSATLSHDQDGKSRGFGFVNYANHESAEAAVA 284
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 66 CRTSNAQQDEVIRR----TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 121
CR +Q+D RR +++ ++D+ + + L F G+++ C++ + + L +
Sbjct: 151 CRIMWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFGKILSCKVASNEHGSLGYG 210
Query: 122 FVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 177
FV + + A AA+ ML Y + K A + +E
Sbjct: 211 FVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAKI---------EEARAHYTN 261
Query: 178 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y N+D VTQ + + FE G++ + D + +R FV F+ E A A+
Sbjct: 262 VYVKNLDPAVTQEEFEKLFEKY-GKITSAAIATDQEGKSRGFGFVNFSEHEQAAKAV 317
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 134
+ ++YV +++ V E L +F G V R+C D L +A+V F + E + A
Sbjct: 78 VNTSLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERA 137
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
L L + P+R P + + +P +R I+ N+D+ + +
Sbjct: 138 LE----QLNYTPIRGRPCRIMWSQRDP-------GQRRAGQGNIFIKNLDEAIDNKALHD 186
Query: 195 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
F + G++ ++ + S FV + ++A AA+ +L
Sbjct: 187 TF-AAFGKILSCKVASNEHGSLGYGFVHYESNDAAEAAIKHVNGML 231
>gi|332030568|gb|EGI70256.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 678
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + + + FV F
Sbjct: 130 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGYGFVHF 189
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 190 ETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 239
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +T+ +K FE G + +++ +R +AF + AE A+ LN
Sbjct: 240 KNFGEDMTEDKLKDMFEKY-GTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLELN 296
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 35/193 (18%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR------------------- 119
RT++V ++ + VT++QL LF G++ R+ G + L
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNELHPKMKSV 401
Query: 120 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
+A++ F EE + ALS+ G +RV S + ++R ++++
Sbjct: 402 YAYIRFESEESTKKALSVNGRKFEGNYIRVDMSMKS-------------NDRYETKKSVF 448
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSG 237
N+ V ++ F+ CGE+Q +R++ D Q F V F ++ AL G
Sbjct: 449 IGNLHFNVDDDSVRNHFKR-CGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALELDG 507
Query: 238 AVLGSLPIRVSPS 250
+ + IRV P+
Sbjct: 508 TTILNREIRVKPN 520
>gi|345496336|ref|XP_001602582.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Nasonia vitripennis]
Length = 924
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 56 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN 115
GY + +M +N Q+ + TV+VS++D TEE++ ++ R+ D
Sbjct: 656 GYEEADEKMEEDMNNLQEADP-NITVFVSNLDYTATEEEVREALKPIWPIISFRMVKDFK 714
Query: 116 SVLR-FAFVEFTDEEGARAALSLAGTMLGFYPV---RVLPSKTAIAPVNPTFLPRSEDER 171
+ F +V + EE AL L T + P+ R P KT+ P+ F ++E E+
Sbjct: 715 GRSKGFCYVSLSSEEAVNEALKLDRTRINGRPMFISRCDPDKTSRGPI---FKYKTELEK 771
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESA 229
++ + T+ D++ F V G ++ +R++ Y+ HS +A+VEF A
Sbjct: 772 N----KLFVKGLSPTTTKEDLENIFR-VHGSLKDVRIV-TYRNGHSKGLAYVEFDDENCA 825
Query: 230 IAALNCS-GAVLGSLPIRVSPSKTPVRPRAP 259
AL + G + I V+ S+ P R P
Sbjct: 826 AKALVATDGMTIADKVINVAISQPPQRKHLP 856
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 63 RMNCRTSNA----QQDEVIRRTVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNS- 116
R+N + A Q E T++V D+ +VT+ L+ F G V ++ D +
Sbjct: 138 RLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVVDRTTG 197
Query: 117 -VLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSE----D 169
+ FV F DE E RA + G P+R+ P+ A P+ P ++
Sbjct: 198 RSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGGNAG 257
Query: 170 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMA 226
+ + + TI+ +D VT ++K F GE+ +++ R FV++ A A
Sbjct: 258 DSDPNNTTIFVGGLDANVTDDELKSIF-GQFGELLHVKIP----PGKRCGFVQYANRATA 312
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
E A++ LN G LG IR+S ++P +
Sbjct: 313 EHALSVLN--GTQLGGQSIRLSWGRSPNK 339
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNS--VLRFAFVEFTDE- 128
Q E T++V D+ +VT+ L+ F G V ++ D + + FV F DE
Sbjct: 148 QTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADEN 207
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSE----DEREMCSRTIYCTNI 183
E RA + G P+R+ P+ A P+ P ++ + + + TI+ +
Sbjct: 208 EQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGL 267
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGS 242
D VT ++K F GE+ +++ R FV++A SA AL+ +G LG
Sbjct: 268 DANVTDDELKSIF-GQFGELLHVKIP----PGKRCGFVQYANKASAEHALSVLNGTQLGG 322
Query: 243 LPIRVSPSKTPVR 255
IR+S ++P +
Sbjct: 323 QSIRLSWGRSPNK 335
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 123
N + +NA ++ T++V +D VT+++L ++F G+++ +I P R FV
Sbjct: 245 QNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIP--PGK--RCGFV 300
Query: 124 EFTDEEGARAALS-LAGTMLGFYPVRV 149
++ ++ A ALS L GT LG +R+
Sbjct: 301 QYANKASAEHALSVLNGTQLGGQSIRL 327
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 20/193 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F + GE+ R++ D H+ + ++FV+ A AE+AI A+N S+
Sbjct: 112 REAF-APFGEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTN 169
Query: 247 VSPSKTPVRPRAP 259
S K P PR P
Sbjct: 170 WSTRKLP-PPREP 181
>gi|303284403|ref|XP_003061492.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456822|gb|EEH54122.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 525
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 136
+++T++V ++ VT EQL T+F CG V DCRI + F FVE+ E A A L
Sbjct: 177 LQKTLHVGNLAPGVTVEQLRTIFAFCGVVTDCRIANE----KAFGFVEYATHEQALAGLG 232
Query: 137 LAGTMLGFYPVRVLPSKT 154
L G L P+RV SKT
Sbjct: 233 LNGLALEDRPLRVEMSKT 250
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
+T++ N+ VT ++ F + CG V R+ + FVE+A E A+A L
Sbjct: 179 KTLHVGNLAPGVTVEQLRTIF-AFCGVVTDCRIA----NEKAFGFVEYATHEQALAGLGL 233
Query: 236 SGAVLGSLPIRVSPSKT 252
+G L P+RV SKT
Sbjct: 234 NGLALEDRPLRVEMSKT 250
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 69 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFT 126
S++Q+ E ++YV ++D V+E L +F G V R+C D + L +A+V F
Sbjct: 30 SDSQKVETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFN 89
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
D E R A+ L + P++ P + + +P+ R+ S I+ N+
Sbjct: 90 DYEAGRQAIE----KLNYTPIKGQPCRIMWSQRDPSL-------RKKGSGNIFIKNLHAD 138
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALNC-SGAVLGSL 243
+ + F SV G + ++ D +S FV F E+A A++ +G +L
Sbjct: 139 IDNKALHDTF-SVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAINGMLLNGQ 197
Query: 244 PIRVSP 249
+ V+P
Sbjct: 198 EVYVAP 203
>gi|213407206|ref|XP_002174374.1| U4/U6 snRNA-associated-splicing factor PRP24 [Schizosaccharomyces
japonicus yFS275]
gi|212002421|gb|EEB08081.1| U4/U6 snRNA-associated-splicing factor PRP24 [Schizosaccharomyces
japonicus yFS275]
Length = 999
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 23/194 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ E+ + LF G VV R N+ RF +V+ E A L L
Sbjct: 659 TLFVTNFPPSFDEQAITALFEPFGAVVQVRFPSLKFNARRRFCYVQMRTPEEAHNTLQLN 718
Query: 139 GTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKL 194
G +L G + ++V S P ++ RE R +Y TNID T+ D++
Sbjct: 719 GKLLEGNFELKVHLSD-----------PDNKQSREGPIYEKRELYVTNIDFACTKTDVEK 767
Query: 195 FFESVCGEVQRLRL--LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGS--LPIRVSPS 250
FF S G V+ +RL Y+H+ +V + + A AL+ +G LGS L + +S +
Sbjct: 768 FF-SRYGSVENVRLPSRNPYRHAG-FGYVVMSNKDEAERALSATGERLGSRVLNVVISVA 825
Query: 251 KTPVRP-RAPRPPL 263
K P + + +PP+
Sbjct: 826 KPPKKVINSSKPPV 839
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-CGDPNSVLRFAFVEFTDEEGARAALS 136
+R +YV++ID T+ + F G V + R+ +P F +V ++++ A ALS
Sbjct: 748 KRELYVTNIDFACTKTDVEKFFSRYGSVENVRLPSRNPYRHAGFGYVVMSNKDEAERALS 807
Query: 137 LAGTMLGFYPVRVL-----PSKTAIAPVNP--------TFLPRSEDEREMCSRTIYCTNI 183
G LG + V+ P K I P T LPR E ++ ++++ N+
Sbjct: 808 ATGERLGSRVLNVVISVAKPPKKVINSSKPPVSTKPSGTELPRVTLE-QVHNKSLGVMNV 866
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM-AESAIAALNCSGAVLGS 242
D+ V + ++ FE GE+ R+ L ++ A VE+ A++ AA++ G L
Sbjct: 867 DETVNEARLRQMFEPY-GELFRVVLHPEHNG----AIVEYKDPAKAGKAAMSVEGYELAG 921
Query: 243 LPIRV 247
+ +
Sbjct: 922 RRLHI 926
>gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDETGASKGY 189
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 238
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI VT+ D + FE G+V L D + +R FV F ESA A+
Sbjct: 239 FTNVYVKNIAADVTEDDFRQLFEKY-GDVTSSSLARDQEGKSRGFGFVNFTTHESASKAV 297
Query: 234 N 234
+
Sbjct: 298 D 298
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFT-DEEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALEE 119
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 120 LNYTIIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 167
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 168 -AAFGNILSCKVAQDETGASKGYGFVHYETDEAASQAIKHVNGML 211
>gi|145478851|ref|XP_001425448.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392518|emb|CAK58050.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALSLA 138
V++S + +E + +LF CG+++ ++ D N +L + + F+D E + AL+L
Sbjct: 4 VFISGLPYTASENDVQSLFEDCGEILSIKLPRYQDSNRLLGYGHITFSDSEAIQKALALN 63
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
GT LG + V +K P P P C TI+ N+ + I F
Sbjct: 64 GTQLGGRYIDVKEAK-GTQPQKPNVPPPD------C-LTIFVKNLSYDLNADQIGDSFRP 115
Query: 199 VCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
CG+V +R++ + ++ A+++F +S I AL +G + ++V
Sbjct: 116 -CGKVANVRMVYNTVSKNFKGFAYIDFEDHQSVIKALQMNGKKVHGRQVQVD 166
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGARAAL-SL 137
VYV ++ + T E L LF T G + +I D N + RF FV F + A A+ L
Sbjct: 201 NVYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGNSKRFGFVNFQSSDSAATAVEKL 260
Query: 138 AGTMLGFYPV----RVLPSKTAIAPVNPTF----LPRSEDEREMCSRTIYCTNIDKKVTQ 189
G+ V R A + F L R E + +Y NIDK + +
Sbjct: 261 NGSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYE---KFQGANLYLKNIDKSLNE 317
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRV 247
+K F S G + +++ D + ++ + FV F E A A++ +G ++G P+ V
Sbjct: 318 EKLKELF-SEFGTITSCKVMSDARGRSKGVGFVAFTTPEEASKAIDEMNGKIIGQKPVYV 376
Query: 248 S 248
S
Sbjct: 377 S 377
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 137
++YV D+ V + QL LF V+ R+C D S L + +V +++ A A+
Sbjct: 26 SLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNARDAANAME- 84
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L + P+ P + + +P R+ ++ N++ + D K E
Sbjct: 85 ---NLNYVPLNGKPIRIMFSHRDPLI-------RKTGFANLFIKNLETSI---DNKALHE 131
Query: 198 --SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL 233
SV G V ++ D HS FV+F +SA A+
Sbjct: 132 TFSVFGNVLSCKVAMDSNGHSKGHGFVQFDNDQSAKNAI 170
>gi|195487595|ref|XP_002091975.1| GE11925 [Drosophila yakuba]
gi|194178076|gb|EDW91687.1| GE11925 [Drosophila yakuba]
Length = 634
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +K FFE G++ +++ ++ +AF AE+A+ ALN
Sbjct: 188 KNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 244
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ Q V E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F VR P + + +P+ R ++ N+DK + I F
Sbjct: 62 ---TMNFDLVRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKAIDNKAIYDTF- 110
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG----DPNSVLRFAFV 123
TSN + T+YV ++DQ+VT+ L +F T GQVV +I + + + FV
Sbjct: 7 TSNVAETTNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFV 66
Query: 124 EFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
EF D A A+ + G + Y +R ++ + A +NP ED ++ +
Sbjct: 67 EFADPRVAEQAIQDMNGRKIFNYEIRANWAQPS-ANINPPLQMTKEDTTNHFH--VFVGD 123
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEF---AMAESAIAALNCSG 237
+ ++ + F S G + ++ D S FV F AE AIA +N G
Sbjct: 124 LAAEINDEKLAQAF-SEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMN--G 180
Query: 238 AVLGSLPIRVSPSKTPVRPRAPRP 261
LG+ PIR + + + P P
Sbjct: 181 EWLGTRPIRCNWATQKGQTAMPAP 204
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 46 LFNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV 105
+FN ++ R ++Q +N ++D V+V D+ ++ +E+LA F G +
Sbjct: 86 IFN--YEIRANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQAFSEFGTM 143
Query: 106 VDCRICGDP--NSVLRFAFVEFTDEEGA-RAALSLAGTMLGFYPVR----VLPSKTAI-A 157
+ + DP F FV F D+ A RA ++ G LG P+R +TA+ A
Sbjct: 144 SEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWATQKGQTAMPA 203
Query: 158 PVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 215
P LP ++ + +IY NI V+Q D+ F+ G VQ ++ +Q
Sbjct: 204 PQPGQQLPYEVVVQQTPAYVTSIYVGNIPLNVSQNDLVQPFQRF-GYVQEVK----FQAD 258
Query: 216 TRIAFVEFAMAESAIAAL 233
AFV+ E+A A+
Sbjct: 259 RGFAFVKMDTHENAANAI 276
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 48 NTAFQKRNGYSQGKRRMNCRTSNAQQDEVI------RRTVYVSDIDQQVTEEQLATLFLT 101
N A +K NG + G +++ + D ++ +Y+ ++D +TE L F +
Sbjct: 154 NNAIEKLNGSTVGNKQIYVGKFVRKGDRILPGYDAKYTNLYIKNLDSDITEALLQEKFSS 213
Query: 102 CGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLAGTMLG---FYPVRVLPSKTAI 156
G+++ I D N + + FAFV + + + A+ A+ ++ G G Y R
Sbjct: 214 FGKIISLAISKDDNGLSKGFAFVNYENPDDAKKAMEAMNGLQFGSKYLYVARAQKKAERE 273
Query: 157 APVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH- 214
++ F R E + + +Y NID VT +++ F S CG + ++++ D +
Sbjct: 274 QILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRDLFSS-CGTITSVKVMRDDKGI 332
Query: 215 STRIAFVEFAMAESAIAAL 233
S FV F+ E A A+
Sbjct: 333 SKGFGFVCFSNPEEANKAV 351
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--LRFAFVEFTDEEGARAALSL 137
++YV D+ V E L F+ G + R+C D ++ L + +V F ++ A A+ L
Sbjct: 13 SIYVGDLHPDVQEHHLFAAFVEFGSIASVRVCRDRVTMNSLCYGYVNFRSQQDAIRAIKL 72
Query: 138 -AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ L +RV+ +L R + R+ ++ N+ + + F
Sbjct: 73 RNNSYLNGKVIRVM------------WLHRDPNARKSGRGNVFVKNLAGSIDNAGLHDLF 120
Query: 197 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+ + ++ + S FV+F ESA A+ +G+ +G+ I V
Sbjct: 121 KKYGNILSSKVVMSEDGKSKGYGFVQFEWEESANNAIEKLNGSTVGNKQIYVG 173
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
+YV +ID VT+++L LF +CG + ++ D + + F FV F++ EE +A +S
Sbjct: 295 NLYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVMSF 354
Query: 138 AG 139
G
Sbjct: 355 NG 356
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR-----------------ICGD- 113
+Q+EV R+T+++ +I ++ L +F G + + R I D
Sbjct: 260 EQEEVDRKTIFIDNIPKETKITTLKKVFGQYGPIDNLRFRNIVPKNPKISKKVAAIKQDI 319
Query: 114 -PNSVLRFAFVEFTDEEGARAALSLAGTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
P V A++++ EE A+ ALS+ G G Y VN + + E+
Sbjct: 320 HPKIVTVVAYIKYKSEESAKKALSMNGKKFEGNY-------------VNVKIVAKLGQEK 366
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTR-IAFVEFAMAESA 229
++I+ N+ + DI F S CGE++ +RL+ D + TR +V F ++
Sbjct: 367 HNIKKSIFIGNLKFGMNTNDIWENF-SKCGEIESVRLIRDKKTGQTRGFGYVNFKSEDAV 425
Query: 230 IAALNCSGAVLGSLPIRVSPSKTP 253
AL G + + P+RV + P
Sbjct: 426 TLALKLDGVEINNRPVRVRTCRAP 449
>gi|224128984|ref|XP_002328861.1| predicted protein [Populus trichocarpa]
gi|222839291|gb|EEE77628.1| predicted protein [Populus trichocarpa]
Length = 950
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
A++++ +++T++VS++ +T EQL LF CG VV+C I +S A++E++ E
Sbjct: 341 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECTIADSKHS----AYIEYSKPEE 396
Query: 131 ARAALSLAGTMLGFYPVRVLPSKT 154
A AAL+L +G P+ V +K+
Sbjct: 397 ATAALALNNMDVGGRPLNVETAKS 420
Score = 38.9 bits (89), Expect = 2.3, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 224
P + + +T++ +N+ +T +K F S CG V + D +HS A++E++
Sbjct: 338 PDKARKEDALKKTLHVSNLSPLLTVEQLKQLF-SFCGTVVECTI-ADSKHS---AYIEYS 392
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPSKT-PVRP 256
E A AAL + +G P+ V +K+ P +P
Sbjct: 393 KPEEATAALALNNMDVGGRPLNVETAKSLPQKP 425
>gi|17136378|ref|NP_476667.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|24654793|ref|NP_725749.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|24654797|ref|NP_725750.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|195335482|ref|XP_002034394.1| GM21847 [Drosophila sechellia]
gi|76803808|sp|P21187.3|PABP_DROME RecName: Full=Polyadenylate-binding protein; Short=PABP;
Short=Poly(A)-binding protein
gi|7302665|gb|AAF57745.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|7302666|gb|AAF57746.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|21428474|gb|AAM49897.1| LD24412p [Drosophila melanogaster]
gi|21626472|gb|AAM68175.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|194126364|gb|EDW48407.1| GM21847 [Drosophila sechellia]
gi|220946756|gb|ACL85921.1| pAbp-PA [synthetic construct]
Length = 634
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +K FFE G++ +++ ++ +AF AE+A+ ALN
Sbjct: 188 KNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 244
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ Q V E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F VR P + + +P+ R ++ N+D+ + I F
Sbjct: 62 ---TMNFDLVRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDRAIDNKAIYDTF- 110
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 137
T+YV ++D +V EE + LFL CG +V+ I D N + FVEF EE A A+ +
Sbjct: 21 TLYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDADYAIKI 80
Query: 138 AGTMLGF-YPVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKLF 195
+ F P++V + S+D+R + ++ N+ + V + ++
Sbjct: 81 MHMVKLFGKPIKVNKA--------------SQDKRTQEVGANVFVGNLHEDVDEKMLRDV 126
Query: 196 FESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
F S G V +++ D Q S R FV + ES+ A++ +G L PI VS
Sbjct: 127 FSSF-GIVLSTKIMRDPETQVSKRYGFVSYDNFESSDASIQAMNGQYLCGKPIDVS 181
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 27/186 (14%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-------LRFAFVEFTD 127
E +R +YV +D +VTE+ L +F T G V +I D N+ L + F+E+ D
Sbjct: 93 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDD 152
Query: 128 EEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDK 185
A RA +L G + +R VN + + + + S I+ ++
Sbjct: 153 PGAAERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSN 202
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVL 240
+V ++ L S CG V R++ D + +AF E A AE A+++++ G L
Sbjct: 203 EVND-EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWL 259
Query: 241 GSLPIR 246
GS IR
Sbjct: 260 GSRAIR 265
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+D V + QL LF QVV RIC D L + +V F++ A A+ +
Sbjct: 25 SLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNARDAAKAIDV 84
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P L KT + + R R+ + ++ N+DK + D K F+
Sbjct: 85 ----LNFTP---LNGKT----IRIMYSIRDPSARKSGAANVFIKNLDKAI---DHKALFD 130
Query: 198 --SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
S G + ++ D S FV+F ESA A++ +G ++ + V P
Sbjct: 131 TFSAFGNILSCKIATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVGP 186
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 62 RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 121
+ N +++ D+ +Y+ ++D V +E+L LF G + C++ DP+ + R +
Sbjct: 289 KERNEQSTKETVDKYHGTNLYIKNLDDSVGDEELRELFSEFGTITSCKVMRDPSGISRGS 348
Query: 122 -FVEFTDEEGARAALS-LAGTMLGFYPVRV 149
FV F+ EGA AL + G M+ P+ V
Sbjct: 349 GFVAFSIAEGASWALGEMNGKMVAGKPLYV 378
>gi|237833723|ref|XP_002366159.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
gi|211963823|gb|EEA99018.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
Length = 768
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD 127
NA + ++YV D+ Q VTE L +F + G V R+C D L +A+V +
Sbjct: 74 NAGAANFVSPSLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQG 133
Query: 128 -EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
++ R+ +L T++ P R++ + R R+ + I+ N+DK
Sbjct: 134 IQDAERSLDTLNYTVIKGQPCRIM------------WCHRDPSLRKSGNGNIFVKNLDKN 181
Query: 187 VTQGDIKLFFE--SVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALN-CSGAVLGS 242
+ D K ++ S+ G + ++ + D HS FV + ESA +A++ +G ++G
Sbjct: 182 I---DNKALYDTFSLFGNILSCKVAVDDNGHSKGYGFVHYENEESARSAIDKVNGMLIGG 238
Query: 243 LPIRVSP 249
+ V P
Sbjct: 239 KTVYVGP 245
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D VTEE L LF G+V C+I +P + +AF+EFT+ A
Sbjct: 3 DESHPKTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGNDP-YAFLEFTNHASAAT 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
AL+ + + + + A +P N P+++ I+ ++ ++ ++
Sbjct: 62 ALAAMNRRV--FLEKEMKVNWATSPGN---QPKTDTSNH---HHIFVGDLSPEIETHILR 113
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
F + GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR +
Sbjct: 114 EAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRTN 170
Query: 249 ------PSKTP 253
P+K P
Sbjct: 171 WSTRKPPTKGP 181
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 63 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 119
++N TS Q D ++V D+ ++ L F G++ +CRI DP ++
Sbjct: 77 KVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKS 136
Query: 120 --FAFVEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSK--TAIAPVN-----PTF 163
+AFV F + A AA+ ++ G LG + R P+K AP + PTF
Sbjct: 137 KGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKGPNEGAPSSKRVKQPTF 196
Query: 164 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 223
++ + T+YC V ++ S G++Q +R+ D + AF+ F
Sbjct: 197 -DEVYNQSSPTNTTVYCGGFTSNVITEELMQSTFSQFGQIQDVRVFRDKGY----AFIRF 251
Query: 224 AMAESAIAALNCS 236
E+A A+ +
Sbjct: 252 TTKEAAAHAIEAT 264
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE 128
A+ + ++YV D++ V E QL LF QVV R+C D + L +A+V F++
Sbjct: 25 AEAGQFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNP 84
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
+ A A+ L L F P+ + ++ +P+ R+ ++ N+D +
Sbjct: 85 QDASNAMEL----LNFTPLNGKAIRIMVSHRDPSM-------RKSGHANVFIKNLDTSID 133
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN 234
++ F S G V ++ D S FV+F E+A +A+N
Sbjct: 134 NKALQETFASF-GSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAIN 179
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+ +D +R++ V++ ++D + + L F + G V+ C++ D N + + FV+F
Sbjct: 109 SHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGSVLSCKVAVDNNGQSKGYGFVQF 168
Query: 126 TDEEGARAALS-LAGTMLGFYPV---RVLPSKTAI-APVNPTFLPRSEDEREMCSRTIYC 180
+EE A++A++ L G ++ V R + + I A +P F +Y
Sbjct: 169 ENEEAAQSAINRLNGMLINDKEVFVGRFVRHQERIEATGSPKFT------------NVYV 216
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
N+ + + D+K FF + + + S FV F +SA AA+
Sbjct: 217 KNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAV 269
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G V +I D N + FVEF D A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAA 146
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + S ++ + S I+ ++ +V
Sbjct: 147 ERAMQTLNGRRIHQSEIR----------VNWAYQSNSANKEDTSSHFHIFVGDLSNEVND 196
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
+I L S G V R++ D + +AF E A AE A+ A++ G LGS
Sbjct: 197 -EILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMD--GEWLGSRA 253
Query: 245 IR 246
IR
Sbjct: 254 IR 255
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G V +I D N + FVEF D A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAA 146
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + S ++ + S I+ ++ +V
Sbjct: 147 ERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSSHFHIFVGDLSNEVND 196
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
+I L S G V R++ D + +AF E A AE A+ A++ G LGS
Sbjct: 197 -EILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMD--GEWLGSRA 253
Query: 245 IR 246
IR
Sbjct: 254 IR 255
>gi|429329983|gb|AFZ81742.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 1110
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 108 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLP 165
C+ N + + +VEF E+ AR + +G +P+ + K + P P
Sbjct: 914 CKPIEKRNFSVGYCYVEFDREDAAREVIQKLINEIG-WPLDCELEDVKFQVTPSIPMINK 972
Query: 166 RSEDEREM------------CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 213
SE R++ SRT+Y TN+ K T+ ++ FF CG V+ +++ D
Sbjct: 973 TSERVRKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLDRM 1032
Query: 214 HSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
+R FVEF +A+ AL S VL I VS S + +P+
Sbjct: 1033 GKSRGYGFVEFCDERTAMDALLLSTLVLDDREILVSRSNRAIYKDSPK 1080
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGD 113
N S+ R++ + + RTVY++++ + TE++L++ F +CG V +IC D
Sbjct: 971 NKTSERVRKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLD 1030
Query: 114 PNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 161
R + FVEF DE A AL L+ +L + V S AI +P
Sbjct: 1031 RMGKSRGYGFVEFCDERTAMDALLLSTLVLDDREILVSRSNRAIYKDSP 1079
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
F+ R+G RR + N + + E +RTV+ + + TE + F G+V D
Sbjct: 176 FENRDG-----RRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 230
Query: 108 CRICGDPNS--VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK-----------T 154
R+ D NS ++EF D A++L+G +L PV V PS+ +
Sbjct: 231 VRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASS 290
Query: 155 AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ- 213
A V P R +Y N+ +T+ +++ FE G+++ ++L D +
Sbjct: 291 GAAVVGPYG---------AVDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMET 340
Query: 214 -HSTRIAFVEFAMAESAIAALNCSGAV-LGSLPIRVS 248
H FV+FA E A AA + +G + + I+VS
Sbjct: 341 GHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVS 377
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVE 222
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 193 PEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 249
Query: 223 FAMAESAIAALNCSGAVLGSLPIRVSPSK 251
F A S A+ SG +L P+ V PS+
Sbjct: 250 FYDAMSVPMAIALSGQLLLGQPVMVKPSE 278
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 135 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 194
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 195 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 243
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI+ +VT+ + + F + GEV L D + +R FV F SA A+
Sbjct: 244 FTNVYVKNINHEVTEEEFRELF-AKYGEVTSSSLARDNEGKSRGFGFVNFTTHASAAKAV 302
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + ++G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGEKALEE 124
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 125 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 172
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 173 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGML 216
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ ++D+ + + L F G ++ C+I D N + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIASDENGSKGYGFVHFE 146
Query: 127 DEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
EE AR A+ ML Y + +P K IA + ++ +Y N
Sbjct: 147 TEEAARQAIEKVNGMLLNGKKVYVGKFIPRKERIALLG---------DKMKRFNNVYIKN 197
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 240
++ I+ F+ G++ +++ D +R FV + E+A A+ N +G L
Sbjct: 198 FGDELDDDKIRELFDPF-GKIISAKVMTDEIGKSRGFGFVSYEEPEAAEKAVDNLNGMEL 256
Query: 241 GS 242
G
Sbjct: 257 GG 258
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ VTE L F T G V+ R+C D L +A+V F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F ++ P + + +P+ R+ ++ N+DK + D K ++
Sbjct: 72 ----MNFDTIKGRPIRIMWSQRDPSL-------RKSGVGNVFIKNLDKSI---DNKALYD 117
Query: 198 --SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D S FV F E+A A+ +L
Sbjct: 118 TFSAFGNILSCKIASDENGSKGYGFVHFETEEAARQAIEKVNGML 162
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 85/204 (41%), Gaps = 21/204 (10%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 127
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGV---GYVEFKS 233
Query: 128 EEGARAALSLAGTMLGFYPV-----RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
E+ AL L G L PV ++ A P + P S + +Y N
Sbjct: 234 EDSVPLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSSNAHPNS-----VPFHRLYVGN 288
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 240
I VT+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 289 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 347
Query: 241 GSLPIRVSPSKTPVRPRAPRPPLH 264
PIRV P + +H
Sbjct: 348 AGRPIRVGLGNDKFTPESTANLMH 371
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 17 CPLLLILSCFKLLVWLLVWYFLSLIKVLCLFNTAFQKRNGYSQGKRRMNCRTSNAQQDEV 76
PL L L+ KLL I V+ A + R N +SNA + V
Sbjct: 237 VPLALQLTGQKLLG----------IPVIVQHTEAEKNRQA-------RNPDSSNAHPNSV 279
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 135
+YV +I VTE+ L +F G++ ++ D N R + FV+F D AR AL
Sbjct: 280 PFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREAL 339
Query: 136 S-LAGTMLGFYPVRVLPSKTAIAP 158
+ G L P+RV P
Sbjct: 340 EKMNGFDLAGRPIRVGLGNDKFTP 363
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 137
++V D+ ++ + L F G++ DCR+ DP ++ + FV F + A +A+ ++
Sbjct: 57 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAM 116
Query: 138 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
G LG + R P+ + A P ++ + T+YC + +T+
Sbjct: 117 NGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEEL 176
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
++ F S G +Q +R+ D + AF+ F+ ESA A+
Sbjct: 177 MQKTF-SPFGSIQEIRVFKDKGY----AFIRFSTKESATHAI 213
>gi|428673176|gb|EKX74089.1| polyadenylate-binding protein, putative [Babesia equi]
Length = 663
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 137
++YV D+ VTE L +F + G V R+C D L +A+V + + A AAL
Sbjct: 32 SLYVGDLQPDVTEAILYEVFNSVGPVSSIRVCRDSITRKSLGYAYVNYYSVQDAEAALE- 90
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L + ++ P++ + +PT R+ + I+ N+D+ + D K F++
Sbjct: 91 ---SLNYIDIKGHPTRIMWSNKDPTL-------RKSGAGNIFVKNLDRSI---DTKAFYD 137
Query: 198 SVC--GEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
+ G + ++ D S FV + ESA A+ +G V+G + VSP
Sbjct: 138 TFSHFGPILSCKVAMDENGVSKGYGFVHYDTEESAKEAIEKVNGMVIGGKKVEVSP 193
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 28/201 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+ +D +R++ ++V ++D+ + + F G ++ C++ D N V + + FV +
Sbjct: 107 SNKDPTLRKSGAGNIFVKNLDRSIDTKAFYDTFSHFGPILSCKVAMDENGVSKGYGFVHY 166
Query: 126 TDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS----RTIYC 180
EE A+ A+ + G ++G V V P F+ + + R+ S +Y
Sbjct: 167 DTEESAKEAIEKVNGMVIGGKKVEVSP-----------FIKKQD--RDPASVDVFTNLYV 213
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSG 237
N + +K F + GE+ + + D + + AFV FA MA+ A+ ALN +
Sbjct: 214 RNFPVSWDEEALKQFLDKY-GEITSMMIKEDGK-GRKFAFVNFAEPEMAKEAVEALNGTK 271
Query: 238 AVLGSLPIRVSPSKTPVRPRA 258
GS P+ V P + + +A
Sbjct: 272 LEEGSEPLLVCPHQDKAKRQA 292
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
+Y+ ++D T+E L LF G + C+I D + V R F FV F+ E A A++
Sbjct: 313 NLYIKNLDDSFTDESLQELFGQFGSITSCKIMRDASGVSRGFGFVCFSRPEEATKAIA 370
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 14/177 (7%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 115 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGY 174
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV + E A A+ ML L K + + R EM ++ +
Sbjct: 175 GFVHYETGEAAETAIKAVNGML-------LNDKKVYVGYHISRKERQSKLDEMKAQFTNL 227
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
Y N+D VTQ + + F+ + + + +S FV + E A +A++
Sbjct: 228 YIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFVNYEHHEEAQSAVDA 284
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 17/164 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALSL 137
+YV ++D VTE L +F G V R+C D L +A+V + + +G RA L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQL 105
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+++ R++ S+ R R+ I+ N+D+++ + F
Sbjct: 106 NYSLIKNRACRIMWSQ------------RDPALRKTGQGNIFIKNLDEQIDNKALHDTF- 152
Query: 198 SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G V ++ D + S FV + E+A A+ +L
Sbjct: 153 AAFGNVLSCKVATDEHGRSKGYGFVHYETGEAAETAIKAVNGML 196
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + + + FV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGYGFVHF 146
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 147 ETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 196
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +T +K FE G + +++ +R +AF + AE A+ LN
Sbjct: 197 KNFGEDMTDDKLKEMFEKY-GTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLELN 253
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ S G + ++ D +++ FV F E+A +++ +L
Sbjct: 117 DTFSAFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGML 163
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +K FFE G++ +++ ++ +AF AE+A+ ALN
Sbjct: 188 KNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 244
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ Q V E L F T G V+ R+C D L +A+V F A AL +
Sbjct: 3 SLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ +L P+R++ S+ R R ++ N+D+ + I F
Sbjct: 63 MNFDLLRNKPIRIMWSQ------------RDPSLRRSGVGNVFIKNLDRAIDNKAIYDTF 110
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 -SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 131
DE RRTV+V + ++ ++L F G VV+ +I D +VEF DEE
Sbjct: 242 DERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVGYVEFKDEESV 301
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIYCTNI 183
+ A+ L G L P+ IA + R E + +Y NI
Sbjct: 302 QKAIQLTGQKLLGIPI--------IAQLTEAEKNRQARHTEGTATQSNGIPFHRLYVGNI 353
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALNCSGAV 239
+T+ D+K FE GE++ ++L + Q ++ + F++ A A+ A+ +N G
Sbjct: 354 HFSITEDDLKNVFEPF-GELEFVQLQKEEQGRSKGYGFVQFIDPAQAKEALEKMN--GFE 410
Query: 240 LGSLPIRVS 248
L PIRV
Sbjct: 411 LAGRPIRVG 419
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 25/175 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFE 146
Query: 127 DEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
E A+ A+ ++ G +L + V V F R E E E+ +R + TNI
Sbjct: 147 THEAAQHAINTMNGMLLNDHKVFV-----------GHFKSRREREVELGARAMEFTNIYV 195
Query: 186 KVTQGDI------KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL 233
K Q D+ +LF S G++ ++++ D HS FV F E A A+
Sbjct: 196 KNLQADVDEQGLQELF--SQFGKMLSVKVMRDSSGHSRGFGFVNFETHEEAQKAV 248
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ M+ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEMIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEASI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + ++ D S FV F E+A A+N +L
Sbjct: 117 DTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQHAINTMNGML 162
>gi|356525215|ref|XP_003531222.1| PREDICTED: uncharacterized protein LOC100790138 [Glycine max]
Length = 975
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
A +D+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E
Sbjct: 337 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECTITDSKH----FAYIEYSKPEE 392
Query: 131 ARAALSLAGTMLGFYPVRVLPSKT 154
A AAL+L +G P+ V +K+
Sbjct: 393 ATAALALNNIDVGGRPLNVEMAKS 416
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 66 CRTSNAQQDEVIRR----TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+ +Y+ ++ + + L F T G ++ C++ D N V R F
Sbjct: 109 CRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGF 168
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV F +E AR A+ ML + + ++ + R E+ ++ +
Sbjct: 169 GFVHFENESDARDAIEAVDGML-------MNDQEVYVALHVSKKDRQSKLEEVKAKFTNV 221
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
Y NID++ +Q + + F G++ L D + R + F + A A A+ LN
Sbjct: 222 YVKNIDQETSQEEFEELF-GKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELN 280
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEE-GARAALS 136
++YV +++ V+E L +F G V R+C D N+ L +A+V F D E G +A
Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQ 98
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P+ R+ S IY N+ + + F
Sbjct: 99 LNYTLIKGKPCRIMWSQR-----DPSL-------RKKGSGNIYIKNLHPAIDNKSLHETF 146
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D +R FV F A A+ +L
Sbjct: 147 -STFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGML 190
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGTSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +K FFE G++ +++ ++ +A+ AE+A+ ALN
Sbjct: 188 KNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQALN 244
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ Q + E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD- 61
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F +R P + + +P+ R ++ N+DK + I F
Sbjct: 62 ---TMNFDLIRDKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKAIDNKAIYDTF- 110
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 SAFGNILSCKVATDEKGTSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 125
TS +Q+ TV+V + + + LA+ F +CG+VV RI D ++ F +VEF
Sbjct: 195 TSEGEQEAT--NTVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEF 252
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
D + A A+ G L VRV + A P D+R + T++ ++
Sbjct: 253 ADVDSAIKAIEFEGKELDGRAVRVNFA-NARKPDADKRAKVFNDKRSPPADTLWIGSLPF 311
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVL 240
T+ I F G+VQ +RL D + + F + A A +A+ ALN G+
Sbjct: 312 DTTEDHIYETF-GEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEALN--GSEF 368
Query: 241 GSLPIRV 247
GS IR+
Sbjct: 369 GSRRIRI 375
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T +++ ++D + + L F G ++ C++ D N + +
Sbjct: 139 CRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVATDENGNSKGY 198
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 199 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 247
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 229
+Y NI+ +VT+ + + FF S GE+ L D + R FV ++ SA
Sbjct: 248 YTNVYIKNINLEVTEEEFREFF-SKWGEITSSTLARDAEGKPRGFGFVNYSTHASA 302
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 69 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSVADGEKALEE 128
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ I+ N+D + + F
Sbjct: 129 LNYTLIKGKPCRIMWSQ------------RDPALRKTGHGNIFIKNLDAAIDNKALHDTF 176
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 177 -AAFGNILSCKVATDENGNSKGYGFVHYETDEAAAQAIKHVNGML 220
>gi|51969240|dbj|BAD43312.1| putative protein [Arabidopsis thaliana]
Length = 597
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 125
T N ++D V+ +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 150 TDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITF 209
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 179
E+GA+ AL+ +G R L + + P+ +PR + EM +Y
Sbjct: 210 DTEDGAKRALAFDRAAMGD---RYLTIQQYVKTTTPS-IPRRKTSSGFAPEMVDGYNRVY 265
Query: 180 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 236
N+ T+ DI KLF + V V+ + + G+++ A V+F + S AL
Sbjct: 266 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKG---YAHVDFKDSVSVAIALKLD 322
Query: 237 GAVLGSLPIRV 247
V+ P+++
Sbjct: 323 QQVICGRPVKI 333
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
TVYV++ ++ + LF CG+++ R+ ++ RF +V F D+E + A+
Sbjct: 678 TVYVANYPPAADQKYIRDLFKDCGEILSIRLPSLKVDARRRFCYVSFRDQEASAKAVKKD 737
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQGDIKLF 195
GT+L + + + P + RE R I+ +N+D+ T+ D+K
Sbjct: 738 GTVL----------EGGLKLLAKYSDPSHKKAREGALAEGREIHISNLDRTATEADLKEV 787
Query: 196 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALNCS 236
F S G V R+ L + T+ AF++FA AE A+A +N +
Sbjct: 788 F-SKYGNVTRVNLPRNLVGKTKGFAFIDFATKEEAEKAVAEMNNT 831
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 125
T + +E + TV+V ++ V EE LA F CG V RI D + F +V F
Sbjct: 172 TKKPKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTF 231
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
+ AA++L GT L +RV S T P + R E + + T++ N+
Sbjct: 232 ESADALTAAMALTGTELDGREIRVDVS-TPKPPRDGNRQGRKEAPQSAPTTTLFLGNLSF 290
Query: 186 KVTQGDIKLFFESVCGEVQRLRL-----LGDYQHSTRIAFVEFAMAESAIAALN 234
VT+ +I+ F S G++ +R G ++ + + + A+ A+ LN
Sbjct: 291 NVTEDEIRESF-SQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLN 343
>gi|356510930|ref|XP_003524186.1| PREDICTED: uncharacterized protein LOC100796921 [Glycine max]
Length = 969
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
A +D+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E
Sbjct: 331 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECAITDSKH----FAYIEYSKPEE 386
Query: 131 ARAALSLAGTMLGFYPVRVLPSKT 154
A AAL+L +G P+ V +K+
Sbjct: 387 ATAALALNNIDVGGRPLNVEMAKS 410
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN--SVLRFAFVEFTDEEGARAALSL 137
++YV D+DQ V E QL LF QVV R+C D L +A+V F+ + A A+
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME- 94
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F PV P + I+ +P+ R+ ++ N+D + ++ F
Sbjct: 95 ---HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSIDNKALRDTF- 143
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 229
+ G V ++ D ++ FV+F ESA
Sbjct: 144 AAFGTVLSCKVAVDSNGQSKGYGFVQFESEESA 176
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 12/179 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
VYV ++ + T++ L LF G + + D N + F FV F + + A AA+ L
Sbjct: 214 NVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKL 273
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER-----EMCSRTIYCTNIDKKVTQGDI 192
GT+LG + A + E ER ++ +Y N+D + +
Sbjct: 274 DGTVLGDDKTLYVGRAQRKAEREAELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKL 333
Query: 193 KLFFESVCGEVQRLRLLGDYQH--STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
K F S G + +++ D QH S FV F+ + A ALN +G + G P+ V+
Sbjct: 334 KELF-SEYGTITSCKVMLD-QHGLSKGSGFVAFSSPDEATKALNEMNGKMKGRKPLYVA 390
>gi|15233246|ref|NP_191094.1| phragmoplastin interacting protein 1 [Arabidopsis thaliana]
gi|7019667|emb|CAB75768.1| putative protein [Arabidopsis thaliana]
gi|332645849|gb|AEE79370.1| phragmoplastin interacting protein 1 [Arabidopsis thaliana]
Length = 597
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 125
T N ++D V+ +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 150 TDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITF 209
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 179
E+GA+ AL+ +G R L + + P+ +PR + EM +Y
Sbjct: 210 DTEDGAKRALAFDRAAMGD---RYLTIQQYVKTTTPS-IPRRKTSSGFAPEMVDGYNRVY 265
Query: 180 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 236
N+ T+ DI KLF + V V+ + + G+++ A V+F + S AL
Sbjct: 266 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKG---YAHVDFKDSVSVAIALKLD 322
Query: 237 GAVLGSLPIRV 247
V+ P+++
Sbjct: 323 QQVICGRPVKI 333
>gi|345567796|gb|EGX50724.1| hypothetical protein AOL_s00075g150 [Arthrobotrys oligospora ATCC
24927]
Length = 1471
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 23/183 (12%)
Query: 58 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNS 116
++ K+R+N R Q TVYV++ E + LF CG +++ R N+
Sbjct: 1066 TRDKKRLNGREITVQLG--FNTTVYVTNFPPTADENWIRELFKECGPILEVRFPSLKYNN 1123
Query: 117 VLRFAFVEFTDEEGARAALSLAGTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC- 174
RF +V+F E A A + G + GF V L P + ER
Sbjct: 1124 HRRFCYVQFDASEDAEKATEMNGKDVEGFKLVSKLSD------------PNVKQERSGAV 1171
Query: 175 --SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESAI 230
R ++ NID T+ DI+ F S G V+ +RL+ G HS F++F ESA
Sbjct: 1172 YEGREVFVRNIDYAATEDDIRELF-SKYGTVKSIRLISKGRGVHSG-YGFLDFETTESAN 1229
Query: 231 AAL 233
A+L
Sbjct: 1230 ASL 1232
>gi|242039427|ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
gi|241920962|gb|EER94106.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
Length = 664
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 25/196 (12%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSL 137
+T++V ++ + EQ+ F G+VVD R+ D S + VEF E A+ AL
Sbjct: 413 KTIFVGNLAYSIEREQVKEFFEEAGEVVDIRLSTFDDGSFKGYGHVEFATAEAAQKALEF 472
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE----REMCSR---TIYCTNIDKKVTQG 190
G L +R+ +A + P S + R+ R T++ D V +
Sbjct: 473 GGRDLMGRSLRI-----DLAVERGAYTPNSGKDNGSFRKSAQRSGNTVFIKGFDTSVGED 527
Query: 191 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 245
I+ E CG++ R+ + DY S +A+++F +S A +G LG +
Sbjct: 528 QIRSALEEHFRSCGDITRISIPKDYDTGASKGMAYMDFKDPDSLNKAYEMNGTYLGDYSL 587
Query: 246 RVSPSKTPVRPRAPRP 261
V +K PRP
Sbjct: 588 YVDEAK-------PRP 596
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF 125
T AQQ ++YV D++ VTE QL F + G VV R+C D L +A+V F
Sbjct: 26 TPAAQQPGAGTSSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNF 85
Query: 126 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
A A+ L ++ P+RVL S+ R R I+ N+D
Sbjct: 86 QSPNDAAHAIDVLNFQVINGKPIRVLYSQ------------RDPAVRRSGVGNIFIKNLD 133
Query: 185 KKVTQGDIKLFFESVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 240
K + D K ++ G + ++ D Q +++ FV+F E+A AA+ N +G L
Sbjct: 134 KAI---DNKALLDTFAQFGTITSAKVAMDGQGNSKGYGFVQFETQEAAQAAIDNVNGMEL 190
Query: 241 GSLPIRVSP 249
+ V P
Sbjct: 191 NDKQVYVGP 199
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
+Y+ +++ +E+L LF G + CR+ D + V R AFV F+ +E RA +
Sbjct: 319 NLYIKNLEDGTDDEKLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPDEATRAVTEM 378
Query: 138 AGTMLGFYPVRV 149
G M+G P+ V
Sbjct: 379 NGKMVGAKPLYV 390
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN--SVLRFAFVEFTDEEGARAALSL 137
++YV D+DQ V E QL LF QVV R+C D L +A+V F+ + A A+
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME- 94
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F PV P + I+ +P+ R+ ++ N+D + ++ F
Sbjct: 95 ---HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSIDNKALRDTF- 143
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESA 229
+ G V ++ D S FV+F ESA
Sbjct: 144 AAFGTVLSCKVAVDSNGQSKGYGFVQFESEESA 176
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 12/179 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
VYV ++ + T++ L LF G + + D N + F FV F + + A AA+ L
Sbjct: 214 NVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKL 273
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER-----EMCSRTIYCTNIDKKVTQGDI 192
GT+LG + A + E ER ++ +Y N+D + +
Sbjct: 274 DGTVLGDDKTLYVGRAQRKAEREAELRAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKL 333
Query: 193 KLFFESVCGEVQRLRLLGDYQH--STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
K F S G + +++ D QH S FV F+ + A ALN +G + G P+ V+
Sbjct: 334 KELF-SEYGTITSCKVMLD-QHGLSKGSGFVAFSSPDEATKALNEMNGKMKGRKPLYVA 390
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+D VT+ QL +F GQVV R+C D ++ L + +V +++ + A AL +
Sbjct: 13 SLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 72
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ I+ N+DK + + F
Sbjct: 73 ----LNFTPLNNKPIRIMYSHRDPSI-------RKSGMANIFIKNLDKGIDHKALHDTFS 121
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D S FV+F E+A A++ +L
Sbjct: 122 SF-GNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGML 164
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+Y+ ++D + +E+L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 295 NLYIKNLDDSINDEKLKELFSDFGAITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 354
Query: 138 AGTMLGFYPVRV 149
G ML P+ V
Sbjct: 355 NGKMLISKPLYV 366
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGA 131
+EV R +YV +I + VT ++LA +F G V + D RF FV + E A
Sbjct: 65 EEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEA 124
Query: 132 RAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLP---RSEDERE----MCSRTIYCTNI 183
AA+ SL T +G ++V V +FLP RS E E +Y N+
Sbjct: 125 NAAIESLNETEVGGRKIKV--------NVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNL 176
Query: 184 DKKVTQGDIKLFFESVCGEVQRL---RLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAV 239
K VT +K FF S GEV R+ G + S FV F+ E AA++ + A
Sbjct: 177 AKSVTTEMLKNFF-SEKGEVLSATVSRIPGTAK-SKGYGFVTFSSEEEVQAAVSTFNNAE 234
Query: 240 LGSLPIRVS 248
L PIRV+
Sbjct: 235 LEGQPIRVN 243
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALS-L 137
+YV D+ + V EE L F G V R+C D + LR+ +V + A AL L
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+++ P+RV+ S R D R I+ N++ V ++ F
Sbjct: 104 NHSLVLDKPIRVMWSN------------RDPDARRSGVGNIFVKNLNNSVDNASLQELF- 150
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
S G+V ++ + ++R FV+FA ESA A+ N +G++ + V+
Sbjct: 151 SKFGDVLSCKVAKNEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHVA 203
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 37/223 (16%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 129
++D V+V D+ +V +E L F G + D R+ D NS + F+ F D+
Sbjct: 98 KEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKT 157
Query: 130 GARAAL-SLAGTMLGFYPVRV-----------------LPSKT--AIAPVNPTFLPRSED 169
A A+ ++ G LG +RV P T A AP+N P S D
Sbjct: 158 DAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYD 217
Query: 170 ----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
+ + T+Y N+ TQ D+ F+S+ G + +R+ D AFV+
Sbjct: 218 SVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDT 272
Query: 226 AE-SAIAALNCSGAVLGSLPIRVSPSK-----TPVRPRAPRPP 262
E +A+A + G ++ PI+ S K T +P P P
Sbjct: 273 HEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQPGGPLSP 315
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 22/180 (12%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 134
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 13 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 72
Query: 135 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L +L G + +R VN + + E ++ ++ +V +
Sbjct: 73 LQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILG 122
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
F S G + R++ D +AF + AE AIA +N G LGS IRV+
Sbjct: 123 KAF-SAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRVN 179
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALS- 136
T+++ DI + VTEE L LF+ G VV I D N + +AFVEF E+ ALS
Sbjct: 13 TLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDCMYALSV 72
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ G L P+++ + T P + DE ++ ++ +Y N+ + V G++ F
Sbjct: 73 MQGVKLFGVPLKLSANST----------PSTGDELDVGAK-LYIGNLSQDVNDGNLLQTF 121
Query: 197 ESVCGEVQRLRLL-----GDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
G V R++ G +A+ F A+ A A+N G G PI VS
Sbjct: 122 RQF-GNVLHARVVVDPATGKSLGHGFVAYDSFDAADKAKKAMN--GEYFGGQPITVS 175
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 29/180 (16%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
T+YV +D++VT+ L LF+ G VV + D NS F FVEF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P++V + S E+ M I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANIFVGNLDPEV---DEKL 115
Query: 195 FFESVCG-----EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
F++ +V ++ + +S AFV FA E++ +A+ SG L + I VS
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMSGQFLCNRAITVS 175
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 136
++YV D+D VT+ QL F QVV R+C D N+ L + +V +++ E A A+
Sbjct: 42 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQK 101
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 102 LNYSTLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETF 149
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S CG + ++ D+ +R FV+F +SA A+ +G VL I V P
Sbjct: 150 -SGCGTIVSCKVAADHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGP 203
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFT-DEEGARAALSL 137
+YV ++D VT+E+L LF G + C++ DP+ + + FV F+ E +R +
Sbjct: 324 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 383
Query: 138 AGTMLGFYPVRV 149
G M+G P+ V
Sbjct: 384 NGKMVGGKPLYV 395
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 21/190 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D VTE L TLF G V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHTAAVT 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL+ + VL + + +P P+++ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETNIL 112
Query: 193 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 247
+ F + GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR
Sbjct: 113 REAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 248 SPS--KTPVR 255
+ S K P +
Sbjct: 170 NWSTRKPPAK 179
>gi|357625522|gb|EHJ75940.1| hypothetical protein KGM_20346 [Danaus plexippus]
Length = 245
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
++V D+ ++ + L F G++ DCR+ DP ++ + FV F + A +A++ +
Sbjct: 56 IFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAITAM 115
Query: 138 AGTMLGFYPVRV-LPSKTAIAPVN-----PTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
G LG +R ++ AP N P ++ + T+YC + +T+
Sbjct: 116 NGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYCGGLTAGLTEEL 175
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPS 250
++ F+ G +Q +R+ D + AF+ F+ ESA A+ A + P++ S
Sbjct: 176 MQKTFQPF-GTIQEIRVFKDKGY----AFIRFSTKESATHAIVAVHNADVNGAPVKCSWG 230
Query: 251 KTPVRPR 257
K P
Sbjct: 231 KESGDPN 237
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 83/191 (43%), Gaps = 27/191 (14%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF-TDEEGARAA 134
R + ++ + VTE L LF G + +I D + L + FVEF T EE ARA
Sbjct: 83 RNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFETAEEAARAI 142
Query: 135 LSLAGTMLGFYPVRVL---PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
++ G ++V PS ++I N +Y N+ + +T+
Sbjct: 143 QAMNGRQYMNKRLKVSIARPSSSSITGAN-----------------LYIKNLPRTITEDQ 185
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 248
++ F GE+ RLL D IAFV F A AE A+A LN + S PI V
Sbjct: 186 LRAIFNPF-GEIISARLLYDGDVPKGIAFVRFDKRACAERAVAELNNTVPANCSQPIAVK 244
Query: 249 PSKTPVRPRAP 259
+ T R RAP
Sbjct: 245 FADTNRRSRAP 255
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 81/236 (34%), Gaps = 51/236 (21%)
Query: 50 AFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 109
A Q NG +R+ + + +Y+ ++ + +TE+QL +F G+++ R
Sbjct: 141 AIQAMNGRQYMNKRLKVSIARPSSSSITGANLYIKNLPRTITEDQLRAIFNPFGEIISAR 200
Query: 110 ICGDPNSVLRFAFVEF-------------------------------TDEEGARAALSLA 138
+ D + AFV F T+ + S A
Sbjct: 201 LLYDGDVPKGIAFVRFDKRACAERAVAELNNTVPANCSQPIAVKFADTNRRSRAPSGSSA 260
Query: 139 GTMLG---FYPVRVLP---------SKTAIAPVNPTFLPRSEDEREMCSRTIYCT----- 181
G G YP +P + +AP+ P F+P S D +RT Y
Sbjct: 261 GMHQGSMMAYPSMPMPYGGGFQQPQPQPTMAPLQPGFVPMSPDMLPPSARTPYGYCLFVF 320
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFV---EFAMAESAIAALN 234
N+ + + F + G V + R FV +F A +AI LN
Sbjct: 321 NLPPFMDEDGFARLFANFGGVVSASISRKSLSQARRYGFVTMRDFGEAATAIQNLN 376
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 132
E +RTV+ I + E + F G+V D R+ D NS ++EF D
Sbjct: 219 ERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 278
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPT----------FLPRSEDEREMCSRTIYCTN 182
A++L+G L PV V PS+ V T P S +R +Y N
Sbjct: 279 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYS-----GGARKLYVGN 333
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAV-L 240
+ +T+ DI+ FE+ G+V+ ++L L + H FV+FA E A A + +G + +
Sbjct: 334 LHVSITEADIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEI 392
Query: 241 GSLPIRVS 248
G I+VS
Sbjct: 393 GGRTIKVS 400
>gi|261195985|ref|XP_002624396.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239587529|gb|EEQ70172.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
Length = 1294
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 865 TVIVENLPSDVTELRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTASAAHAATELN 924
Query: 139 GTMLGFYPVRVLPSKTAIAPV-----NPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDI 192
GT ++ +++ P+ +PT R + M R I+ +N+D K T+ D+
Sbjct: 925 GTQQEVSGNSMVSAESTKLPLVVKISDPT--KRQDRTGPMEEGREIHVSNLDWKATEDDL 982
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
F + GEV+ R+ +++ FV F +SA AAL + S P+ V S
Sbjct: 983 VELF-TAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAMHEQLFRSRPLNVHIST 1041
Query: 252 -TPVRPRA 258
TP + +A
Sbjct: 1042 PTPAKRQA 1049
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
R ++VS++D + TE+ L LF G+V RI N + F FV F ++ A AAL++
Sbjct: 966 REIHVSNLDWKATEDDLVELFTAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAM 1025
Query: 138 AGTMLGFYPVRV 149
+ P+ V
Sbjct: 1026 HEQLFRSRPLNV 1037
>gi|224060343|ref|XP_002300152.1| predicted protein [Populus trichocarpa]
gi|222847410|gb|EEE84957.1| predicted protein [Populus trichocarpa]
Length = 892
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 130
A++++ +++T++VS++ +T EQL LF CG VV+C I +S A++E++ E
Sbjct: 315 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECAIADSKHS----AYIEYSKPEE 370
Query: 131 ARAALSLAGTMLGFYPVRVLPSKT 154
A AAL+L +G P+ V +K+
Sbjct: 371 ATAALALNNMDVGGRPLNVEMAKS 394
Score = 38.1 bits (87), Expect = 3.7, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 224
P + + +T++ +N+ +T +K F S CG V + D +HS A++E++
Sbjct: 312 PDKARKEDALKKTLHVSNLSPLLTVEQLKQLF-SFCGTVVECAI-ADSKHS---AYIEYS 366
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPSKT-PVRP 256
E A AAL + +G P+ V +K+ P +P
Sbjct: 367 KPEEATAALALNNMDVGGRPLNVEMAKSLPQKP 399
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG--DPNSVLRFAFVEFTDE 128
AQQ+ ++V + +V ++ L F G+V D R+ + FV F +
Sbjct: 121 AQQENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRK 180
Query: 129 EGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLP-RSEDE--REMCSR--TIYCTN 182
E A A+ + G L ++V + IA + T P RS DE E S+ T+Y N
Sbjct: 181 EDAETAMQMMNGEKLEGRNIKVNWVTSNIA--SKTEQPKRSYDEINNETSSQNCTVYIGN 238
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
I K V D+K + G ++ +RL D + AF++F+ ESA +A L C+G ++
Sbjct: 239 IPKNVESDDLKQLL-AEYGSIEEVRLNKDKGY----AFIKFSKHESATSAILMCNGKIIN 293
Query: 242 SLPIRVS 248
+R S
Sbjct: 294 GSTLRCS 300
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 136
++Y D+D TE QL LF T G VV R+C D L +A+V F + ARA +
Sbjct: 33 SLYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAIDA 92
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L ++ P+R++ S+ +P R+ I+ N+DK++ D K +
Sbjct: 93 LNFQVVNGKPIRIMYSQR-----DPAL-------RKSGVGNIFIKNLDKEI---DNKALY 137
Query: 197 ESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
++ G + ++ D Q S FV+F E A +A+ +G +L + V P
Sbjct: 138 DTFAQFGNIVSAKVATDLQGQSKGYGFVQFDTEEGAQSAIEKVNGMLLNDKQVYVGP 194
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 30/210 (14%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
FQKRN G N VYV ++ + VTEE+L +F G + +
Sbjct: 195 FQKRNERGGGPTTFN--------------NVYVKNLHESVTEEKLREVFEKFGALTSVVV 240
Query: 111 CGDPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPV--------RVLPSKTAIAPVNP 161
D + F FV + D E A ++ + G+ + R A +
Sbjct: 241 MKDAEGKSKGFGFVCYEDAEAAGKSVE---ELDGYDKIEDKAWVVCRAQKKSEREAELKA 297
Query: 162 TF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IA 219
F R E +M +Y N++ V ++ F G + R++ D ++R A
Sbjct: 298 KFDAERRERMEKMAGANLYIKNLEDTVDDAKLRELFAEF-GTITSCRVMRDTAGASRGSA 356
Query: 220 FVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
FV F+ A+ A A+ +G + G P+ V+
Sbjct: 357 FVAFSSADEATRAVTEMNGKMAGQKPLYVA 386
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE 128
Q E + + V+ I Q TEE LA +F G+V +I D N+ F FV++ +E
Sbjct: 19 GDQVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNE 78
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E A A+ + M Y + L + P +M + +Y TN+ K VT
Sbjct: 79 EDAAKAIQVINGMN--YKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVT 125
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAAL-NCSGAVLGS--L 243
+ D+ F S GE+ + +L D +AFV F+ E A AA+ + G +L + L
Sbjct: 126 EDDVHRLF-SNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIADLDGKLLENAML 184
Query: 244 PIRVSPSKTPVRPRA 258
P+ V ++ R +A
Sbjct: 185 PLSVRVAEDHGRQKA 199
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 50 AFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC- 108
A Q NG + +R+ S ++ +Y++++ + VTE+ + LF G+++
Sbjct: 84 AIQVINGMNYKNKRLKVSYSRPPGADMKASNLYITNLPKDVTEDDVHRLFSNYGEIIQKS 143
Query: 109 ----RICGDPNSVLRFAFVEFTDEEGARAALS-LAGTML 142
+I G P V AFV F+ E A+AA++ L G +L
Sbjct: 144 VLKDKITGMPRGV---AFVRFSRGEEAKAAIADLDGKLL 179
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE 128
Q E + + V+ I Q TEE LA +F G+V +I D N+ F FV++ +E
Sbjct: 19 GDQVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNE 78
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E A A+ + M Y + L + P +M + +Y TN+ K VT
Sbjct: 79 EDAAKAIQVINGM--NYKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVT 125
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAAL-NCSGAVLGS--L 243
+ D+ F S GE+ + +L D +AFV F+ E A AA+ + G +L + L
Sbjct: 126 EDDVHRLF-SNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIADLDGKLLENAML 184
Query: 244 PIRVSPSKTPVRPRA 258
P+ V ++ R +A
Sbjct: 185 PLSVRVAEDHGRQKA 199
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 50 AFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC- 108
A Q NG + +R+ S ++ +Y++++ + VTE+ + LF G+++
Sbjct: 84 AIQVINGMNYKNKRLKVSYSRPPGADMKASNLYITNLPKDVTEDDVHRLFSNYGEIIQKS 143
Query: 109 ----RICGDPNSVLRFAFVEFTDEEGARAALS-LAGTML 142
+I G P V AFV F+ E A+AA++ L G +L
Sbjct: 144 VLKDKITGMPRGV---AFVRFSRGEEAKAAIADLDGKLL 179
>gi|239614479|gb|EEQ91466.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ER-3]
Length = 1294
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 865 TVIVENLPSDVTELRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTASAAHAATELN 924
Query: 139 GTMLGFYPVRVLPSKTAIAPV-----NPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDI 192
GT ++ +++ P+ +PT R + M R I+ +N+D K T+ D+
Sbjct: 925 GTQQEVSGNSMVSAESTKLPLVVKISDPT--KRQDRTGPMEEGREIHVSNLDWKATEDDL 982
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
F + GEV+ R+ +++ FV F +SA AAL + S P+ V S
Sbjct: 983 VELF-TAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAMHEQLFRSRPLNVHIST 1041
Query: 252 -TPVRPRA 258
TP + +A
Sbjct: 1042 PTPAKRQA 1049
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
R ++VS++D + TE+ L LF G+V RI N + F FV F ++ A AAL++
Sbjct: 966 REIHVSNLDWKATEDDLVELFTAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAM 1025
Query: 138 AGTMLGFYPVRV 149
+ P+ V
Sbjct: 1026 HEQLFRSRPLNV 1037
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 21/190 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D VTE L TLF G V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDP-YAFLEFTCHTAAVT 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL+ + VL + + +P P+++ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETNIL 112
Query: 193 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 247
+ F + GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR
Sbjct: 113 REAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 248 SPS--KTPVR 255
+ S K P +
Sbjct: 170 NWSTRKPPAK 179
>gi|296088276|emb|CBI36502.3| unnamed protein product [Vitis vinifera]
Length = 888
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 339 DALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKH----FAYIEYSKPEEATAA 394
Query: 135 LSLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 165
L+L +G P+ V LP K AI +P+ LP
Sbjct: 395 LALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|225466283|ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244513 [Vitis vinifera]
Length = 926
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 339 DALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKH----FAYIEYSKPEEATAA 394
Query: 135 LSLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 165
L+L +G P+ V LP K AI +P+ LP
Sbjct: 395 LALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG--DPNSVLRFAFVEFTDE 128
AQQ+ ++V + +V ++ L F G+V D R+ + FV F +
Sbjct: 121 AQQENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRK 180
Query: 129 EGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLP-RSEDE--REMCSR--TIYCTN 182
E A A+ + G L ++V + IA + T P RS DE E S+ T+Y N
Sbjct: 181 EDAETAMQMMNGEKLEGRNIKVNWVTSNIA--SKTEQPKRSYDEINNETSSQNCTVYIGN 238
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
I K V D+K + G ++ +RL D + AF++F+ ESA +A L C+G ++
Sbjct: 239 IPKNVESDDLKQLL-AEYGSIEEVRLNKDKGY----AFIKFSKHESATSAILMCNGKIIN 293
Query: 242 SLPIRVS 248
+R S
Sbjct: 294 GSTLRCS 300
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 63 RMNCRTSNAQ-QDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPN 115
R+N ++ + QD+ T++V D+ VT+ L F + +VV R+ G
Sbjct: 140 RLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTG--- 196
Query: 116 SVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL-------PRS 167
+ FV+F DE E RA + G P+R+ P+ + F P +
Sbjct: 197 RTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTSGSQQFSKTSYQNPPGT 256
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM-- 225
++E + + TI+ N+D VT ++ F S GE+ +++ R FV+F+
Sbjct: 257 QNENDPNNTTIFVGNLDSNVTDEHLRQVF-SQYGELVHVKIPA----GKRCGFVQFSDRS 311
Query: 226 -AESAIAALNCSGAVLGSLPIRVSPSKTP 253
AE A+ LN G +G IR+S ++P
Sbjct: 312 CAEEALRILN--GTPIGGQNIRLSWGRSP 338
>gi|403415768|emb|CCM02468.1| predicted protein [Fibroporia radiculosa]
Length = 1020
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 13/190 (6%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 136
R T+YV++ ++ + + LF G + D R S RF +++FT A AAL
Sbjct: 692 RSTLYVTNFPEKADDAFVRNLFTKYGTIFDVRWPSKKFKSTRRFCYIQFTSPTSAEAALE 751
Query: 137 LAGTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
L L P+ V S NP D + R IY + + VT+ D++
Sbjct: 752 LHKQELEDGLPLNVYIS-------NPERKKERTDS-DANDREIYVAGLSRFVTKKDLETL 803
Query: 196 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
F + G V+ +R+ D + AF+EF + A AAL+ + L + I V+ + T
Sbjct: 804 FRTY-GTVKEVRMALDPNGRPKGFAFIEFEQEQDASAALSANNYELKNRRIAVTLADTRN 862
Query: 255 RPRAPRPPLH 264
R + R P H
Sbjct: 863 RAKN-RDPNH 871
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 114
N Y R RT + D R +YV+ + + VT++ L TLF T G V + R+ DP
Sbjct: 764 NVYISNPERKKERTDSDAND----REIYVAGLSRFVTKKDLETLFRTYGTVKEVRMALDP 819
Query: 115 NSVLR-FAFVEFTDEEGARAALS 136
N + FAF+EF E+ A AALS
Sbjct: 820 NGRPKGFAFIEFEQEQDASAALS 842
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 139
TV+V+D+ E+ L LF CG + + ++ PNS++ A VEF + + AAL+
Sbjct: 620 TVFVADLPPAAGEDDLTLLFKDCGSIREIKMTQLPNSLV--ATVEFMERDSVPAALTKDK 677
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
+G V V RS T+Y TN +K ++ F +
Sbjct: 678 KRIGGEEVAV------------HLAWRS---------TLYVTNFPEKADDAFVRNLF-TK 715
Query: 200 CGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVL-GSLPIRV 247
G + +R ++ + R +++F SA AAL L LP+ V
Sbjct: 716 YGTIFDVRWPSKKFKSTRRFCYIQFTSPTSAEAALELHKQELEDGLPLNV 765
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 21/182 (11%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D V+E+ L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 192
AL+ RV K VN P + + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLDKEIK--VNWATSPGNTPKTDISSHHHIFVGDLSPEIETETL 111
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F + GE+ R++ D H+ + ++FV+ A AE+AI ++N G +GS IR
Sbjct: 112 REAF-APFGEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQSMN--GQWIGSRNIR 167
Query: 247 VS 248
+
Sbjct: 168 TN 169
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 127
+D+ +RT++V I Q+ L F T G Q+V R+ G V +VEF D
Sbjct: 144 EDDRDKRTIFVQQISQRALTHHLLAFFETVGPVIEAQIVKDRVTGRSKGV---GYVEFKD 200
Query: 128 EEGARAALSLAGTMLGFYP-VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
EE AL L G L P + L P+ + +Y NI
Sbjct: 201 EESVAKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFS 260
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVL 240
VT+ D+ F + GE++++ L D + R + FV+ A+ A+A +N G L
Sbjct: 261 VTEQDLHTIF-APFGELEQVTLQRDETNPARSKGYGFVQFVDPTKAKEALAEMN--GFEL 317
Query: 241 GSLPIRV 247
IRV
Sbjct: 318 AGRQIRV 324
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 63 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 119
++N TS Q D ++V D+ ++ L F G++ +CRI DP ++
Sbjct: 77 KVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKS 136
Query: 120 --FAFVEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSK-TAIAPVN-----PTFL 164
+AFV F + A AA+ ++ G LG + R PSK AP + PTF
Sbjct: 137 KGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTF- 195
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 224
++ + T+YC V D+ S G++Q +R+ D + AF+ F
Sbjct: 196 DEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGY----AFIRFT 251
Query: 225 MAESAIAALNCS 236
E+A A+ +
Sbjct: 252 TKEAAAHAIEAT 263
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D VTE + TLF G+V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDP-YAFLEFTSHTAAAT 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL+ + VL + + +P P+++ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETHIL 112
Query: 193 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 247
+ F + GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR
Sbjct: 113 RDAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 248 SPS--KTPVRPRAPRP 261
+ S K P +P P
Sbjct: 170 NWSTRKPPSKPNEGAP 185
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 122 CRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 181
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE--DEREMCSRTI 178
FV + E A A+ ML L K + + R DE + I
Sbjct: 182 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFDEMKANFTNI 234
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
Y NID VT+ + + FE GE+ L D + +R FV ++ ESA AA++
Sbjct: 235 YIKNIDPDVTEEEFRKIFEQF-GEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVD 290
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 125
TS ++ ++YV ++D VTE L LF + GQV R+C D L +A+V +
Sbjct: 40 TSPNNNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 99
Query: 126 TD-EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
+ +G RA L T++ P R++ S+ +P R+ ++ N+D
Sbjct: 100 NNTADGERALEDLNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLD 147
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ + F + G + ++ D + +S FV + AE+A A+ +L
Sbjct: 148 SAIDNKALHDTF-AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 203
>gi|195584475|ref|XP_002082032.1| GD11341 [Drosophila simulans]
gi|194194041|gb|EDX07617.1| GD11341 [Drosophila simulans]
Length = 379
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML L K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +K FFE G++ +++ ++ +AF AE+A+ ALN
Sbjct: 188 KNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 244
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ Q V E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F VR P + + +P+ R ++ N+D+ + I F
Sbjct: 62 ---TMNFDLVRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDRAIDNKAIYDTF- 110
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
S G + ++ D + +++ FV F E+A +++ +G +L + V
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGK 164
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFT 126
+DE RRT++V + ++ + L T F G Q+V R+ G V +VEF
Sbjct: 159 NEDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGV---GYVEFK 215
Query: 127 DEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
+EE AA+ L G ML P+ ++ ++ NP + ++ +Y N+
Sbjct: 216 NEESVAAAIRLTGQMLLGIPIIAQLTEAEKNRQARNPEAT--AGNQHTAPFHRLYVGNVH 273
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGS 242
+T+ D+ FE GE++ ++L D ++ AFV+FA E A AL +G L
Sbjct: 274 FSITEDDLTNVFEPF-GELEFVQLQKDETGRSKGYAFVQFANPEQARDALEKMNGFELAG 332
Query: 243 LPIRVSPSKTPVRP--RAPRP 261
IRV P A RP
Sbjct: 333 RAIRVGLGNDKFTPDAHANRP 353
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N ++ +K FFE G++ +++ ++ +A+ AE+A+ ALN
Sbjct: 188 KNFTEEFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQALN 244
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ Q + E L F T G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD- 61
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F +R P + + +P+ R ++ N+DK + I F
Sbjct: 62 ---TMNFDLIRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKAIDNKAIYDTF- 110
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
S G + ++ D + +++ FV F E+A +++ +G +L + V
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVG 163
>gi|224085256|ref|XP_002307525.1| predicted protein [Populus trichocarpa]
gi|222856974|gb|EEE94521.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE 128
A+ + ++YV D++ V E QL LF QVV R+C D + L +A+V F++
Sbjct: 15 AEAGQFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNP 74
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
+ A A+ L L F P+ + ++ +P+ R+ ++ N+D +
Sbjct: 75 QDAANAMEL----LNFTPLNGKAIRIMVSHRDPSM-------RKSGHANVFIKNLDTSID 123
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN 234
++ F S G V ++ D S FV+F E+A +A+N
Sbjct: 124 NKALQETFASF-GPVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAIN 169
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+ +D +R++ V++ ++D + + L F + G V+ C++ D N + + FV+F
Sbjct: 99 SHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGPVLSCKVAVDNNGQSKGYGFVQF 158
Query: 126 TDEEGARAALS-LAGTMLGFYPV---RVLPSKTAI-APVNPTFLPRSEDEREMCSRTIYC 180
+EE A++A++ L G ++ V R + + I A +P F +Y
Sbjct: 159 ENEEAAQSAINRLNGMLINDKEVFVGRFVRHQERIEATGSPKFT------------NVYV 206
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
N+ + + D+K FF + + + S FV F +SA AA+
Sbjct: 207 KNLSETTSDEDLKKFFSNYGSITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAV 259
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 23/177 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + + + FV F
Sbjct: 109 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVTQDESGASKGYGFVHF 168
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E ++E+ + +Y
Sbjct: 169 ETEEAANKSIEKVNGML-LNGKKVYVGK---------FIPRKERQKELGEKAKLFTNVYV 218
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALN 234
N + +T +K FE ++ D S FV F AE A+ LN
Sbjct: 219 KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPNSAEQAVLDLN 275
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 135
++YV D+ + VTE L +F T G V+ R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 196 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 247
F+ S+ G + ++ D + S FV + ESA A+ +G LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYV 176
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 24/202 (11%)
Query: 73 QDEVIRRT---VYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVE 124
++E+ R+T VYV I + E L T F +CG V + R+ G P +A V
Sbjct: 59 KEEIDRKTEATVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRG---YAHVV 115
Query: 125 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-----RTIY 179
F DE + AL L G L F R L + A AP + +++ RT++
Sbjct: 116 FDDEAALKKALKLDGQYL-FN--RYLSIRRAEAPRAVEMALKEKNQNTTKKAVKGCRTVF 172
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVEFAMAESAIAALNCS 236
+ +V +G I+ S CG + +RL + H+ ++ +VEF+ + A+AA S
Sbjct: 173 IKQLPYEVEEGTIREALAS-CGTITSVRLP-IWNHTKKLKGFGYVEFSSEDEALAAARRS 230
Query: 237 GAVLGSLPIRVSPSKTPVRPRA 258
G +G + +S P+A
Sbjct: 231 GMKIGDRMVLISLDAAGSAPKA 252
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 136
++YV D+D VT+ QL F G VV R+C D L + +V FT+ ++ ARA
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQE 96
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L P+RV+ S R R + I+ N+D+ + + F
Sbjct: 97 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144
Query: 197 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
SV G + ++ D S FV++A ESA A+ +G +L + V P
Sbjct: 145 -SVFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 198
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTDEEGAR 132
D+ +YV ++D +++E+L +F G V C++ DPN + + FV F+ E A
Sbjct: 313 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEAT 372
Query: 133 AALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 176
A+S L+G M+ P+ V AIA R ED R S+
Sbjct: 373 EAMSQLSGKMIESKPLYV-----AIA-------QRKEDRRAQFSQ 405
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 132
+ + ++YV D++ VT+ L LF G VV R+C D ++ L + +V + + + A
Sbjct: 28 QFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAA 87
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL ML F P+ P + + +P+ R + I+ N+DK + D
Sbjct: 88 RALD----MLNFTPLNGKPIRIMYSFRDPSI-------RRSGTANIFIKNLDKAI---DN 133
Query: 193 KLFFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
K ++ S G + ++ D S FV+F ESA A + +G +L + V
Sbjct: 134 KALYDTFSTFGAILSCKIATDASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVG 193
Query: 249 P 249
P
Sbjct: 194 P 194
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 137
+YV ++D + +++L LF G + C++ DPN + R + FV F T EE +RA +
Sbjct: 315 NLYVKNLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADM 374
Query: 138 AGTMLGFYPVRV 149
G M+ P+ V
Sbjct: 375 NGKMVASKPLYV 386
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 24/180 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 189
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 238
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI VT + + FE G+V L D + R FV F E+A A+
Sbjct: 239 FTNVYVKNIGPDVTDDEFRELFEKF-GDVTSSSLARDQEGKPRGFGFVNFTTHEAAFKAV 297
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE-EGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 120 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 167
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 168 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGML 211
>gi|401424605|ref|XP_003876788.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493031|emb|CBZ28316.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 423
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 19/189 (10%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 129
+A ++ + V +S I T QL +F CG + D + AFV +T EE
Sbjct: 129 SADAEKTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEE 184
Query: 130 GARAALSLAGTMLGFYPVRVL---PSKTAIAPVNPTFLPRSEDE--------REMCSRTI 178
AL L GTM+ PV V P A AP + R +E R +
Sbjct: 185 AYEKALKLDGTMVNGNPVAVRPCPPRDDAPAPASRRDAMRRGNEGTTTSAPNRRQLDVRV 244
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGA 238
+ VT+ ++ FF CG + + + + +AFV F AE+A A++ SG
Sbjct: 245 VVHGVPSDVTKEALRAFFSPDCGPLTDVFIKPEIG----VAFVAFTSAENAKRAISKSGE 300
Query: 239 VLGSLPIRV 247
+L +++
Sbjct: 301 MLMGTRVKI 309
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 15/193 (7%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 131
D ++V D+ ++ + L F G++ DCR+ DP ++ + FV F + A
Sbjct: 90 DTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEA 149
Query: 132 RAAL-SLAGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
+A+ ++ G LG + R P+ + P ++ + T+YC +
Sbjct: 150 ESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGGLT 209
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSL 243
+T ++ F G +Q +R+ D + AFV FA ESA A+ + +
Sbjct: 210 SGLTDELVQKTFAPF-GNIQEIRVFKDKGY----AFVRFATKESATHAIVAVHNSDINGQ 264
Query: 244 PIRVSPSKTPVRP 256
P++ S K P
Sbjct: 265 PVKCSWGKESGEP 277
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 56 GYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 113
G +R N Q +DE RRTV+V + ++ +L F G V + +I D
Sbjct: 153 GRDDDRRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKD 212
Query: 114 --PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV-----RVLPSKTAIAPVNPTFLPR 166
+VEF +EE AL L G L PV ++ A P P
Sbjct: 213 RISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPN 272
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM 225
S + +Y NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 273 S-----IPFHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRD 326
Query: 226 AESAIAAL-NCSGAVLGSLPIRVS 248
A A AL +G L PIRV
Sbjct: 327 AGQAREALEKMNGFDLAGRPIRVG 350
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEG 130
Q+E RTV++ + +QVT + F GQV D R+ D NS +VEFTD
Sbjct: 178 QEERDSRTVFIMQLAKQVTIRDIQDFFSKVGQVRDVRLISDRNSRRSKGIGYVEFTDASA 237
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
A+ L+G L P+ V P+ +A N ++ + +Y ++ +T+
Sbjct: 238 VTLAIKLSGQKLLGVPIMVSPT---MAEKNRYAAAQAALVKPQGPMKLYVGSLHYNITEP 294
Query: 191 DIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 247
++ FE G V+ ++L D + S FV F A +A A+ +G L P++V
Sbjct: 295 MLRAIFEPF-GTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAMEQMNGFELAGRPMKV 353
Query: 248 S 248
+
Sbjct: 354 N 354
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFA 224
S++ER+ SRT++ + K+VT DI+ FF V G+V+ +RL+ D + S I +VEF
Sbjct: 177 SQEERD--SRTVFIMQLAKQVTIRDIQDFFSKV-GQVRDVRLISDRNSRRSKGIGYVEFT 233
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPS 250
A + A+ SG L +PI VSP+
Sbjct: 234 DASAVTLAIKLSGQKLLGVPIMVSPT 259
>gi|432102762|gb|ELK30241.1| Polyadenylate-binding protein 1-like protein [Myotis davidii]
Length = 603
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ ++++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNIFIKNLEESIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
E A+ A+S ML +V S F R E E E+ R + TN+ K
Sbjct: 147 TREAAQQAISTMNGML-LNNRKVFVSH---------FKSRQEREAELGVRAMEFTNVYVK 196
Query: 187 VTQGDI------KLFFESVCGEVQRLRLL-GDYQHSTRIAFVEFAMAESAIAAL 233
Q DI +LF S G+ ++++ D HS FV F E A A+
Sbjct: 197 NLQMDIDEQGLEELF--SQFGKTLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAV 248
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADAELALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ I+ N+++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEESI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPSKT 252
+ S G + +++ D S FV F E+A A++ +G +L + + VS K+
Sbjct: 117 DTFSTFGNILSCKVVCDDHGSRGFGFVHFETREAAQQAISTMNGMLLNNRKVFVSHFKS 175
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 32/236 (13%)
Query: 42 KVLCLFNTAFQKRNGYSQGKRRMNCRTSNA---QQDEVIRRTVYVSDIDQQVTEEQLATL 98
+VL +N G + R+N T +A + D+ T++V D+ VT+ L
Sbjct: 121 RVLQTYNGTIMPNGGQN---FRLNWATFSAGERRHDDSPDHTIFVGDLAADVTDYLLQET 177
Query: 99 F------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 151
F +VV R+ G + FV F DE E RA + G + P+R+ P
Sbjct: 178 FRARYPSAKGAKVVIDRLTG---RTKGYGFVRFGDESEQVRAMSEMQGVLCSTRPMRIGP 234
Query: 152 SK-----TAIAPVNPTFLPR-SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQR 205
+ T P P+ +++E + + TI+ N+D VT ++ F GE+
Sbjct: 235 ASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVF-GQYGELVH 293
Query: 206 LRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA 258
+++ R FV+FA AE A+ LN G +LG +R+S ++P +A
Sbjct: 294 VKIPA----GKRCGFVQFADRSCAEEALRVLN--GTLLGGQNVRLSWGRSPSNKQA 343
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
+YV ++D VTE+ L F + G++V I D N + F FV + + AR A+ ++
Sbjct: 195 NLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFVNYDSPDDARRAMEAM 254
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
G+ G Y R ++ F+ + + M S IY NID V +++
Sbjct: 255 DGSQFGSKILYVARAQKKVEREQILHHLFVEKG--LKHMGS-NIYVKNIDTSVGDEELRD 311
Query: 195 FFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC 235
F S CGEV +++ D + +++ FV F+ A +++C
Sbjct: 312 HF-SACGEVLSAKVMRDDKGTSKGFGFVCFSTVVEAFKSMSC 352
>gi|125560429|gb|EAZ05877.1| hypothetical protein OsI_28114 [Oryza sativa Indica Group]
Length = 572
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 138
T+++ ++ + ++Q+ F G+V+ R+ + R F V+F E A+ AL L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELH 371
Query: 139 GTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
G L PVR + + A P + + + S++I+ D + + I+
Sbjct: 372 GCDLDGRPVRLDLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESKIRESL 431
Query: 197 E---SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
E + CGE+ R+ + D + S IA+++F S AL SG+ LG + V +K
Sbjct: 432 EGHFADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLYVDEAK 491
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 56 GYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 113
G +R N Q +DE RRTV+V + ++ +L F G V + +I D
Sbjct: 153 GRDDDRRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKD 212
Query: 114 --PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV-----RVLPSKTAIAPVNPTFLPR 166
+VEF +EE AL L G L PV ++ A P P
Sbjct: 213 RISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPN 272
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM 225
S + +Y NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 273 S-----IPFHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRD 326
Query: 226 AESAIAAL-NCSGAVLGSLPIRVS 248
A A AL +G L PIRV
Sbjct: 327 AGQAREALEKMNGFDLAGRPIRVG 350
>gi|84998214|ref|XP_953828.1| polyadenylate (poly(A)) binding protein [Theileria annulata]
gi|65304825|emb|CAI73150.1| polyadenylate (poly(A)) binding protein, putative [Theileria
annulata]
Length = 664
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 135
++YV D+ VTE L +F T G V R+C D SV R +A+V + + A AAL
Sbjct: 28 SLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRD--SVTRKSLGYAYVNYYSTQDAEAAL 85
Query: 136 -SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
SL + +P R++ S R R + I+ N+DK + D K
Sbjct: 86 ESLNYIEIKGHPTRIMWSN------------RDPSLRRSGAGNIFVKNLDKSI---DTKS 130
Query: 195 FFESVC--GEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
+++ G + ++ D S R FV + ESA A+ +G ++G + V+P
Sbjct: 131 LYDTFSHFGPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAP 189
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+S Q+D+ + +Y+ ++D +E L LF G + ++ D N+ R F FV F
Sbjct: 294 NSSMGQEDKRVTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCF 353
Query: 126 TDEEGARAALS 136
T+ + A A++
Sbjct: 354 TNPQEATKAIA 364
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +YV +D +VTE+ L +F T G V +I D NS L + FVE+ D A R
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 148 AMQTLNGRRVHQSEIR----------VNWAYQSNNANKEDTSNHFHIFVGDLSNEVND-E 196
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ L S G V R++ D + +AF E A AE A+++++ G LGS IR
Sbjct: 197 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRAIR 254
>gi|115475163|ref|NP_001061178.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|75325377|sp|Q6Z1C0.1|NUCL1_ORYSJ RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1
gi|40253662|dbj|BAD05605.1| putative nucleolin [Oryza sativa Japonica Group]
gi|51449869|gb|AAU01907.1| putative nucleolin [Oryza sativa Indica Group]
gi|113623147|dbj|BAF23092.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|125602459|gb|EAZ41784.1| hypothetical protein OsJ_26324 [Oryza sativa Japonica Group]
Length = 572
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 138
T+++ ++ + ++Q+ F G+V+ R+ + R F V+F E A+ AL L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELH 371
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQGD 191
G L PVR+ +A + P S + + S++I+ D + +
Sbjct: 372 GCDLDGRPVRL-----DLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESK 426
Query: 192 IKLFFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 246
I+ E + CGE+ R+ + D + S IA+++F S AL SG+ LG +
Sbjct: 427 IRESLEGHFADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLY 486
Query: 247 VSPSK 251
V +K
Sbjct: 487 VDEAK 491
>gi|321471820|gb|EFX82792.1| hypothetical protein DAPPUDRAFT_302363 [Daphnia pulex]
Length = 841
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 138
TV++S++ + +E+ + + + G + D R+ D + F FVEF+ ++ ARA L
Sbjct: 603 TVFLSNLAYETSEQDVRNMMSSSGTITDIRLVLDYKQRCKGFCFVEFSSQDEARAVLKRD 662
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
++ PV + PS+ A +P F +S E+ + ++ + T+ D++ F+
Sbjct: 663 RELMKGRPVFMSPSEPDAALKHPAFKYQSTLEK----KKLFIKGLALSTTKEDLEALFKK 718
Query: 199 VCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSPSKTPVR 255
G ++ +RL+ S + +A+VEF SA ALN G + V+ S P R
Sbjct: 719 F-GILKDVRLVTFRNGSPKGLAYVEFEDEVSATMALNQTDGTTFQDKVLTVALSNPPPR 776
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 148 RVLPSKTAIAPVN-PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 206
+V P A P + P +P+ + + T++ +N+ + ++ D++ S G + +
Sbjct: 573 KVEPKVNATEPASKPVVIPKPVTDPSRHANTVFLSNLAYETSEQDVRNMMSS-SGTITDI 631
Query: 207 RLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
RL+ DY+ + FVEF+ + A A L ++ P+ +SPS+ + P
Sbjct: 632 RLVLDYKQRCKGFCFVEFSSQDEARAVLKRDRELMKGRPVFMSPSEPDAALKHP 685
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 48 NTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRR------TVYVSDIDQQVTEEQLATLFLT 101
N A + NG++ G +++ + D V+ +YV ++D ++ EE L F
Sbjct: 156 NAAIESLNGFTVGDKQIYVGKFVRKSDRVLANPDIKYTNLYVKNLDPEIGEEHLQEKFSE 215
Query: 102 CGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPV 159
G++ I D N V R F F+ F + + A+ AL +L G+ LG + + ++
Sbjct: 216 FGKISSMIISRDENGVSRGFGFINFENSDDAKRALETLNGSQLGSKVIYIARAQKKTE-- 273
Query: 160 NPTFLPRSEDER------EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 213
L R +E+ + +Y NID VT +++ F S G + +L+ D +
Sbjct: 274 REEVLRRHYEEKCKEQVLKYKGSNVYVKNIDDDVTDEELRERF-SQFGTITSSKLMRDDK 332
Query: 214 HSTR-IAFVEFAMAESAIAALNC 235
+ FV F+ + A A+N
Sbjct: 333 GINKGFGFVCFSNPDEAKRAVNT 355
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 16/172 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS- 136
++YV D+ VT+ QL F + RIC D ++ L + +V F + A A+
Sbjct: 15 SLYVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLSYGYVNFISPQDATNAIEV 74
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ +ML +RV+ S+ R D R+ ++ N+ + ++ F
Sbjct: 75 MNHSMLNGRAIRVMWSR------------RDADARKSGIGNVFVKNLSDSINSLGLQELF 122
Query: 197 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRV 247
+ + D S FV+F ESA AA+ +G +G I V
Sbjct: 123 KKFGNVLSSKVATSDDGKSKGYGFVQFESEESANAAIESLNGFTVGDKQIYV 174
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +AFV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
+E A A+ ML +V + F R E E E+ ++ +Y
Sbjct: 147 TQEAADKAIEKMNGML-LNDRKVFVGR---------FKSRKEREAELGAKAKEFTNVYIK 196
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N ++V G++K F S G+ ++++ D ++ FV + E A A+
Sbjct: 197 NFGEEVDDGNLKELF-SQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAV 248
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDVMKGKPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S AFV F E+A A+ +L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGML 162
>gi|146090988|ref|XP_001466413.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134070775|emb|CAM69132.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 449
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 19/189 (10%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 129
+A + + V +S I T QL +F CG + D + AFV +T EE
Sbjct: 129 SADAERTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEE 184
Query: 130 GARAALSLAGTMLGFYPVRVL---PSKTAIAPVNPTFLPRSEDEREMCSRT--------I 178
AL L G M+ PV V P A AP + R +E S +
Sbjct: 185 ACEKALKLDGAMVNGNPVVVRPCPPRDDAPAPASRRDATRRGNESTTASAPSRRQLDVRV 244
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGA 238
+ VT+ ++ FF CG + + + + +AFV F AE+A A++ SG
Sbjct: 245 VVHGVPSDVTKEALRAFFSPDCGSLTDVFI----KPEIGVAFVAFTSAENAKRAISKSGE 300
Query: 239 VLGSLPIRV 247
+L +R+
Sbjct: 301 MLMGTRVRI 309
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 57 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDP 114
+ +G + R +E RTV+ + Q++ L F + G+V D R+ C
Sbjct: 126 FGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKT 185
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDER 171
A+VEF D E AL L+G L P+ V + K + P +P+
Sbjct: 186 RRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG---- 241
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESA 229
+ +Y ++ +T+ ++ FE G++ ++L+ D + S F+ F A+ A
Sbjct: 242 QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDA 300
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L P++V
Sbjct: 301 KKALEQLNGFELAGRPMKVG 320
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 105 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 164
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 165 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 213
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI +VT + + F + G+V L D + +R FV F E+A A+
Sbjct: 214 FTNVYVKNIANEVTDDEFRDLF-AAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAKAV 272
>gi|401409876|ref|XP_003884386.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
gi|325118804|emb|CBZ54355.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
Length = 763
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 22/195 (11%)
Query: 62 RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLR 119
+R N + A + ++YV D+ Q VTE L +F + G V R+C D L
Sbjct: 67 QRPNGLNAAASAANFVSPSLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVTRRSLG 126
Query: 120 FAFVEFTD-EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI 178
+A+V + ++ R+ +L T++ P R++ + R R+ + I
Sbjct: 127 YAYVNYQGIQDAERSLDTLNYTVIKGQPCRIM------------WCHRDPSLRKSGNGNI 174
Query: 179 YCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN- 234
+ N+DK + D K ++ S+ G + ++ D HS FV + ESA +A++
Sbjct: 175 FVKNLDKNI---DNKALYDTFSLFGNILSCKVAVDENGHSKGYGFVHYENEESARSAIDK 231
Query: 235 CSGAVLGSLPIRVSP 249
+G ++G + V P
Sbjct: 232 VNGMLIGGKTVYVGP 246
>gi|255074269|ref|XP_002500809.1| predicted protein [Micromonas sp. RCC299]
gi|226516072|gb|ACO62067.1| predicted protein [Micromonas sp. RCC299]
Length = 456
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 2/132 (1%)
Query: 27 KLLVWLLVWYF--LSLIKVLCLFNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVS 84
KL W Y + + L N A + ++ + D + RTVY
Sbjct: 186 KLPSWFPAGYKRCALFVPIPHLINGAMAAAEARIEFEKEVRDTAGGHVDDSDVSRTVYAG 245
Query: 85 DIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGF 144
+++ +TE+ LA F G V + G + RF FVEF + A +A +L GT +
Sbjct: 246 NVNSSITEDMLADFFSIAGNVTYVKFAGSEFNPSRFGFVEFDTKAAAESAKALTGTQVAE 305
Query: 145 YPVRVLPSKTAI 156
++V S I
Sbjct: 306 MTIKVKHSNNPI 317
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 234
SRT+Y N++ +T+ + FF S+ G V ++ G + +R FVEF +A +A
Sbjct: 239 SRTVYAGNVNSSITEDMLADFF-SIAGNVTYVKFAGSEFNPSRFGFVEFDTKAAAESAKA 297
Query: 235 CSGAVLGSLPIRVSPSKTPV 254
+G + + I+V S P+
Sbjct: 298 LTGTQVAEMTIKVKHSNNPI 317
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE 128
+Q+ E ++YV ++D V+E L +F G V R+C D + L +A+V F D
Sbjct: 34 SQKVETSSASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDH 93
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E + A+ L + P++ +P + + +P+ R+ S I+ N+ +
Sbjct: 94 EAGKTAIE----KLNYAPIKGVPCRIMWSQRDPSM-------RKKGSGNIFIKNLHPDID 142
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ F SV G + ++ D ++R FV F E+A A++ +L
Sbjct: 143 NKALHDTF-SVFGNILSCKIATDEAGNSRGFGFVHFEDDEAAKEAIDAINGML 194
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGA-RAALSL 137
++Y D+D +VTE L LF VV R+C D N L +A++ F++ A RA +L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFERPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D ++ FV+F ESA AA++ +L
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGML 200
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDE 128
A + R + V+ + Q +TE+ L +F+T G + CR+ D F FV FT E
Sbjct: 9 AAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTRE 68
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E A A+ Y +R K + A P +D +E +Y TN+ + +T
Sbjct: 69 EDAARAID----TFNGYQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAIT 115
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAM---AESAIAALNCSGAVLGSL 243
++ F G + + +L D T +AFV + A+ AIAALN G+
Sbjct: 116 DDQLETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTE 174
Query: 244 PIRV 247
P+ V
Sbjct: 175 PLSV 178
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 114
NGY +R+ + D++ +YV+++ + +T++QL T+F G++V I D
Sbjct: 79 NGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 138
Query: 115 NSVL--RFAFVEFTDEEGARAALS 136
NS AFV + E A+ A++
Sbjct: 139 NSGTPRGVAFVRYDKREEAQEAIA 162
>gi|403221305|dbj|BAM39438.1| polyadenylate-binding protein [Theileria orientalis strain
Shintoku]
Length = 656
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 24/178 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 135
++YV D+ VTE L +F T G V R+C D SV R +A+V + + A AAL
Sbjct: 28 SLYVGDLQPDVTEAVLYEVFNTIGPVASIRVCRD--SVTRKSLGYAYVNYYSTQDAEAAL 85
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 86 E----NLNYIEIKGHPTRIMWSNRDPSL-------RKSGAGNIFVKNLDKSI---DTKSL 131
Query: 196 FESVC--GEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
+++ G + ++ D S R FV + ESA A+ +G ++G + V+P
Sbjct: 132 YDTFAHFGTILSCKVAVDSTGASRRYGFVHYESEESAREAIEKVNGMLIGGKKVEVAP 189
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+ V++ ++D + + L F G ++ C++ D N + +
Sbjct: 130 CRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 189
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 238
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI VT+ D + FE G+V L D + +R FV F ESA A+
Sbjct: 239 FTNVYVKNIAPDVTEDDFRELFEKF-GDVTSSSLARDQEGKSRGFGFVNFTTHESASKAV 297
Query: 234 N 234
+
Sbjct: 298 D 298
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEKALEE 119
Query: 137 LAGTMLGFYPVRVLPSK 153
L T++ P R++ S+
Sbjct: 120 LNYTLIKGRPCRIMWSQ 136
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDE 128
A + R + V+ + Q +TE+ L +F+T G + CR+ D F FV FT E
Sbjct: 55 AAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTRE 114
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E A A+ Y +R K + A P +D +E +Y TN+ + +T
Sbjct: 115 EDAARAID----TFNGYQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAIT 161
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAM---AESAIAALNCSGAVLGSL 243
++ F G + + +L D T +AFV + A+ AIAALN G+
Sbjct: 162 DDQLETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTE 220
Query: 244 PIRV 247
P+ V
Sbjct: 221 PLSV 224
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 114
NGY +R+ + D++ +YV+++ + +T++QL T+F G++V I D
Sbjct: 125 NGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 184
Query: 115 NSVL--RFAFVEFTDEEGARAALS 136
NS AFV + E A+ A++
Sbjct: 185 NSGTPRGVAFVRYDKREEAQEAIA 208
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +AFV F
Sbjct: 104 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFE 163
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
+E A A+ ML +V + F R E E E+ ++ +Y
Sbjct: 164 TQEAADKAIEKMNGML-LNDRKVFVGR---------FKSRKEREAELGAKAKEFTNVYIK 213
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N ++V G++K F S G+ ++++ D ++ FV + E A A+
Sbjct: 214 NFGEEVDDGNLKELF-SQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAV 265
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G V+ R+C D L +A+V F A AL +
Sbjct: 29 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 88
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ +P+ R+ ++ N+DK + D K +
Sbjct: 89 MNFDVMKGKPIRIMWSQR-----DPSL-------RKSGVGNVFIKNLDKSI---DNKALY 133
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S AFV F E+A A+ +L
Sbjct: 134 DTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGML 179
>gi|430813480|emb|CCJ29191.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 597
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 89 QVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 147
Q ++++ +F G V++ R NS RF +V+ E A A+LSL G M
Sbjct: 319 QRIKKKVILIFNEYGDVIEVRFPSLRYNSRRRFCYVQMKYPEQALASLSLHGQMF----- 373
Query: 148 RVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGD-IKLFFESVCGEV 203
K VN + + ED +E S R I +NI + T+ D I LF S G +
Sbjct: 374 ----EKKYKLIVNISDSSKKEDRKEASSSEGREIIISNISHESTENDLIDLF--SKYGTL 427
Query: 204 QRLRLLGD--YQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+ +RL+ D +H ++ ++ AE A++AL+ L S I V
Sbjct: 428 ESVRLINDRNSKHHKGFCYIIYSTAEQALSALDADKQELHSNTISV 473
>gi|387018636|gb|AFJ51436.1| Splicing factor 3B subunit 4-like [Crotalus adamanteus]
Length = 417
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 57 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDP 114
+ +G + R +E RTV+ + Q++ L F + G+V D R+ C
Sbjct: 127 FGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKT 186
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDER 171
A+VEF D E AL L+G L P+ V + K + P +P+
Sbjct: 187 RRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG---- 242
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESA 229
+ +Y ++ +T+ ++ FE G++ ++L+ D + S F+ F A+ A
Sbjct: 243 QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDA 301
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L P++V
Sbjct: 302 KKALEQLNGFELAGRPMKVG 321
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 57 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDP 114
+ +G + R +E RTV+ + Q++ L F + G+V D R+ C
Sbjct: 127 FGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKT 186
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDER 171
A+VEF D E AL L+G L P+ V + K + P +P+
Sbjct: 187 RRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG---- 242
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESA 229
+ +Y ++ +T+ ++ FE G++ ++L+ D + S F+ F A+ A
Sbjct: 243 QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDA 301
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L P++V
Sbjct: 302 KKALEQLNGFELAGRPMKVG 321
>gi|297802818|ref|XP_002869293.1| F27F5.17 [Arabidopsis lyrata subsp. lyrata]
gi|297315129|gb|EFH45552.1| F27F5.17 [Arabidopsis lyrata subsp. lyrata]
Length = 523
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 38/236 (16%)
Query: 48 NTAFQKRNGYSQGKRRMNCRTSNA-------------------QQDEV----IRRTVYVS 84
N A +K+NG + ++ R + ++DE + V VS
Sbjct: 121 NKAMEKKNGEYLHDQEISLRVAQTTPYRPPKNHDSFQLESLPIEEDETPLDFVEEVVIVS 180
Query: 85 DIDQQVTEEQLATLFLTCGQVVDCR-ICGDPNSVLRFAFVEFTDEEGARAALSLA-GTML 142
++ Q + F +VV R + + + FVEF GA AL G L
Sbjct: 181 NLSPQTKIAHIKGFFNDVAEVVSVRLVVNHEGKHVGYGFVEFASAYGANKALEEKNGDYL 240
Query: 143 GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 202
+ + ++ + P F+ E ++T++ N+ + DI FF+ V GE
Sbjct: 241 HDHQILLMRGHES-----PGFV-----EEAAITKTLFVANLCDTIKISDIINFFKDV-GE 289
Query: 203 VQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKT-PVRP 256
V +RL+ + Q FVEFA A A AL +G L + I + +KT P RP
Sbjct: 290 VVHVRLVVNSQGKHAGWGFVEFASANEAEKALVKNGEYLHNYKISLDVAKTAPYRP 345
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 76/185 (41%), Gaps = 17/185 (9%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-GDPNSVLRFA 121
+ N N + T++VS + +Q + F G+VV RIC LR
Sbjct: 51 QQNSEQDNLTSAKAASVTLFVSGLSRQTKISDIIDFFSDVGEVVHVRICITHEGRRLRSG 110
Query: 122 FVEFTDEEGARAALSLA-GTMLGFYPVRVLPSKTAIAPVNP-----TF----LPRSEDER 171
FVEFT A A+ G L + + ++T P P +F LP EDE
Sbjct: 111 FVEFTSASEANKAMEKKNGEYLHDQEISLRVAQT--TPYRPPKNHDSFQLESLPIEEDET 168
Query: 172 --EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAES 228
+ + +N+ + IK FF V EV +RL+ +++ FVEFA A
Sbjct: 169 PLDFVEEVVIVSNLSPQTKIAHIKGFFNDVA-EVVSVRLVVNHEGKHVGYGFVEFASAYG 227
Query: 229 AIAAL 233
A AL
Sbjct: 228 ANKAL 232
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDE 128
A + R + V+ + Q +TE+ L +F+T G + CR+ D F FV FT E
Sbjct: 55 AAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTRE 114
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E A A+ Y +R K + A P +D +E +Y TN+ + +T
Sbjct: 115 EDAARAID----TFNGYQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAIT 161
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAM---AESAIAALNCSGAVLGSL 243
++ F G + + +L D T +AFV + A+ AIAALN G+
Sbjct: 162 DDQLETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTE 220
Query: 244 PIRV 247
P+ V
Sbjct: 221 PLSV 224
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 114
NGY +R+ + D++ +YV+++ + +T++QL T+F G++V I D
Sbjct: 125 NGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 184
Query: 115 NSVL--RFAFVEFTDEEGARAALS 136
NS AFV + E A+ A++
Sbjct: 185 NSGTPRGVAFVRYDKREEAQEAIA 208
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 32/194 (16%)
Query: 64 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFA 121
MN S D T+YV +DQ+VT+E L LF CG V++ + D +
Sbjct: 1 MNFNISERNSDA----TLYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQGYG 56
Query: 122 FVEFTDEEGARAALSLAGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTI 178
FVE+ EE A A+ + ++ Y P++V + S+D+R + I
Sbjct: 57 FVEYKTEEDADYAIKIL-HLIKLYGKPIKVNKA--------------SQDKRTQEVGANI 101
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAAL 233
+ N+D VT+ ++ F S G + R++ D ++ I++ F +++AI+A+
Sbjct: 102 FIGNLDPSVTEMQLQETF-STFGLIIGRRIVRDSDNNQSKGYAFISYDNFESSDNAISAM 160
Query: 234 NCSGAVLGSLPIRV 247
N G GS I V
Sbjct: 161 N--GQYYGSQKISV 172
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 56 GYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 113
G +R N Q +DE RRTV+V + ++ +L F G V + +I D
Sbjct: 153 GRDDERRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKD 212
Query: 114 --PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV-----RVLPSKTAIAPVNPTFLPR 166
+VEF +EE AL L G L PV ++ A P P
Sbjct: 213 RISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPN 272
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM 225
S + +Y NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 273 S-----IPFHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRD 326
Query: 226 AESAIAAL-NCSGAVLGSLPIRVS 248
A A AL +G L PIRV
Sbjct: 327 AGQAREALEKMNGFDLAGRPIRVG 350
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 224
+EDER+ RT++ + ++ ++K FFE V G V +++ D Q S + +VEF
Sbjct: 171 TEDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVNEAQIVKDRISQRSKGVGYVEFK 227
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRP 261
ES AL +G L +P+ V ++ +A P
Sbjct: 228 NEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNP 264
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 135
RTV+ + Q++ L F G+V D R+ D N R A+VEF D E A+
Sbjct: 43 RTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMD-NKTRRSKGIAYVEFQDVESVPLAM 101
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT------IYCTNIDKKVTQ 189
L G L P+ V P++ A N + R +Y ++ +T+
Sbjct: 102 GLNGQKLFGIPIVVQPTQ---AERNRAAAQSASTSSSTLQRGNIGPMRLYVGSLHFNITE 158
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIR 246
+K FE G++ ++ L+ D + S F+ F +E A AL +G L P++
Sbjct: 159 DMLKGIFEPF-GKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMK 217
Query: 247 VS--PSKTPVRPRAPR 260
V +T V P+APR
Sbjct: 218 VGHVTERTDVVPKAPR 233
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMA 226
+ER+M RT++C + +++ D++ FF S G+V+ +RL+ D + S IA+VEF
Sbjct: 38 EERDM--RTVFCMQLSQRIRARDLEEFF-SAVGKVRDVRLIMDNKTRRSKGIAYVEFQDV 94
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSK 251
ES A+ +G L +PI V P++
Sbjct: 95 ESVPLAMGLNGQKLFGIPIVVQPTQ 119
>gi|408390203|gb|EKJ69609.1| hypothetical protein FPSE_10205 [Fusarium pseudograminearum CS3096]
Length = 1080
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALS 136
R TVYV++ + + LF CG+++ R N+ RF +V F D+E + A+
Sbjct: 673 RLTVYVTNYPPAADQNYIRNLFRDCGEILSIRWPSLKVNTHRRFCYVSFRDQEASAKAVE 732
Query: 137 LAGTMLGFYPVRVLPSKTAIAP----VNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQ 189
L GT+L P T + V P + RE R I+ +N+D+ +++
Sbjct: 733 LDGTVL-------EPDGTVLEKRFKLVVKYSDPGYKKAREGALAEGREIHISNLDRSISE 785
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALNCSG------AV 239
++K F S G + R+ + + AF++FA AE A+A +N + AV
Sbjct: 786 TELKEVF-SKYGNITRVNIPATLAGKNKGFAFIDFAAKEGAEKAVAEMNNTKFRSQILAV 844
Query: 240 LGSLPIRVSP-SKTPVRPRA---PRPPLH 264
S R+ P +KT V A P P H
Sbjct: 845 ALSKESRIKPAAKTIVTDNARGSPAPSSH 873
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 131
D+ R + ++ + Q +TE +L +F+T G V +C+I D F FV + + A
Sbjct: 22 DDSSRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDA 81
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
RA +L G + ++V ++ P ED +E +Y TN+ + VT+
Sbjct: 82 IRAIQTLNGLQIQNKRIKVSYAR-----------PPGEDRKET---NLYVTNLPRDVTED 127
Query: 191 DIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAAL 233
++ F S G + ++ LL D +AFV F E A+AA+
Sbjct: 128 ELTNIF-SAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAI 171
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 50 AFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC- 108
A Q NG +R+ + ++ +YV+++ + VTE++L +F G +V
Sbjct: 84 AIQTLNGLQIQNKRIKVSYARPPGEDRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQMN 143
Query: 109 ----RICGDPNSVLRFAFVEFTDEEGARAAL-SLAGTM 141
+I G P V AFV F E A AA+ L GT+
Sbjct: 144 LLKDKITGMPRGV---AFVRFDKREEALAAIEHLNGTI 178
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +AFV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
+E A A+ ML +V + F R E E E+ ++ +Y
Sbjct: 147 TQEAADKAIEKMNGML-LNDRKVFVGR---------FKSRKEREAELGAKAKEFTNVYIK 196
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N ++V G++K F S G+ ++++ D ++ FV + E A A+
Sbjct: 197 NFGEEVDDGNLKELF-SQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAV 248
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDVMKGKPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S AFV F E+A A+ +L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGML 162
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +AFV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
+E A A+ ML +V + F R E E E+ ++ +Y
Sbjct: 147 TQEAADKAIEKMNGML-LNDRKVFVGR---------FKSRKEREAELGAKAKEFTNVYIK 196
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N ++V G++K F S G+ ++++ D ++ FV + E A A+
Sbjct: 197 NFGEEVDDGNLKELF-SQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAV 248
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDVMKGKPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S AFV F E+A A+ +L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGML 162
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 57 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDP 114
+ +G + R +E RTV+ + Q++ L F + G+V D R+ C
Sbjct: 139 FGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKT 198
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDER 171
A+VEF D E AL L+G L P+ V + K + P +P+
Sbjct: 199 RRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG---- 254
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESA 229
+ +Y ++ +T+ ++ FE G++ ++L+ D + S F+ F A+ A
Sbjct: 255 QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDA 313
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L P++V
Sbjct: 314 KKALEQLNGFELAGRPMKVG 333
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDE 128
A + R + V+ + Q +TE+ L +F+T G + CR+ D F FV FT E
Sbjct: 55 AAGGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTRE 114
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
E A A+ Y +R K + A P +D +E +Y TN+ + +T
Sbjct: 115 EDAARAID----TFNGYQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAIT 161
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAM---AESAIAALNCSGAVLGSL 243
++ F G + + +L D T +AFV + A+ AIAALN G+
Sbjct: 162 DDQLETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTE 220
Query: 244 PIRV 247
P+ V
Sbjct: 221 PLSV 224
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 114
NGY +R+ + D++ +YV+++ + +T++QL T+F G++V I D
Sbjct: 125 NGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDK 184
Query: 115 NSVL--RFAFVEFTDEEGARAALS 136
NS AFV + E A+ A++
Sbjct: 185 NSGTPRGVAFVRYDKREEAQEAIA 208
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 24/172 (13%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
++V D+ V +QL F G++ DCR+ DP + + FV F ++ A A++ +
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 138 AGTMLGFYPVRV-----LPSKTA-------IAPVNPTFLPRSEDEREMCSR----TIYCT 181
G LG +R P+ A P + P + DE + T+YC
Sbjct: 110 NGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFDEVYNQASPTNCTVYCG 169
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
+ + +++ I+ F S G +Q +R+ D AFV FA ESA A+
Sbjct: 170 GLGQGLSEELIQKTFSSY-GIIQEIRVFKD----KGYAFVRFATKESATHAI 216
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
Q+E +RTV+V + + +QL F G VV+ +I D +VEF DEE
Sbjct: 206 QEERDKRTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFADEES 265
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI-----YCTNIDK 185
+ AL L G L P+ V + R+ + + S I Y NI
Sbjct: 266 VQKALELTGQKLMNIPIIV-----QLTEAEKNRQARTSEGQPTQSNGIPFHRLYVGNIHF 320
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSL 243
+ + D++ FE GE++ ++L D S FV+FA ++ A AL +G +
Sbjct: 321 SIEESDLRDVFEPF-GELEFVQLQKEDTGRSKGYGFVQFAKSDEAKIALEKMNGFEVAGR 379
Query: 244 PIRV 247
PIRV
Sbjct: 380 PIRV 383
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +AFV F
Sbjct: 104 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFE 163
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
+E A A+ ML +V + F R E E E+ ++ +Y
Sbjct: 164 TQEAADKAIEKMNGML-LNDRKVFVGR---------FKSRKEREAELGAKAKEFTNVYIK 213
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N ++V G++K F S G+ ++++ D ++ FV + E A A+
Sbjct: 214 NFGEEVDDGNLKELF-SQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAV 265
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G V+ R+C D L +A+V F A AL +
Sbjct: 29 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 88
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ +P+ R+ ++ N+DK + D K +
Sbjct: 89 MNFDVMKGKPIRIMWSQR-----DPSL-------RKSGVGNVFIKNLDKSI---DNKALY 133
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S AFV F E+A A+ +L
Sbjct: 134 DTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGML 179
>gi|193783541|dbj|BAG53452.1| unnamed protein product [Homo sapiens]
Length = 424
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV A+A ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV---NKALA----------HNKNLDVGANIFIENLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGA-RAALSL 137
++Y D+D +VTE L LF VV R+C D N L +A++ F++ A RA +L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFDRPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D ++ FV+F ESA AA++ +L
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGML 200
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +AFV F
Sbjct: 16 SQRDPSLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFE 75
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
+E A A+ ML +V + F R E E E+ ++ +Y
Sbjct: 76 TQEAADKAIEKMNGML-LNDRKVFVGR---------FKSRKEREAELGAKAKEFTNVYIK 125
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N ++V G++K F S G+ ++++ D ++ FV + E A A+
Sbjct: 126 NFGEEVDDGNLKELF-SQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAV 177
>gi|118102061|ref|XP_423721.2| PREDICTED: splicing factor 3B subunit 4 [Gallus gallus]
Length = 418
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEKGNSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML L K F+PR E E+E+ + +Y
Sbjct: 138 ETEESANTSIEKVNGML-------LNGKKVYVG---RFIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN-CSGAV 239
N ++ +K FE G + R++ S FV F ESA A+ +G
Sbjct: 188 KNFGDELNDETLKEMFEK-YGTITSHRVMIKDGKSRGFGFVAFENPESAEHAVQELNGKE 246
Query: 240 LGSLPI 245
LG I
Sbjct: 247 LGEGKI 252
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 22/176 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 3 SLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ +P+ R+ ++ N+DK + D K +
Sbjct: 63 MNFDLIKGRPIRIMWSQR-----DPSL-------RKSGVGNVFIKNLDKNI---DNKAMY 107
Query: 197 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+ S G + ++ D + +++ FV F ESA ++ +G +L + V
Sbjct: 108 DTFSAFGNILSCKVAQDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNGKKVYVG 163
>gi|189190886|ref|XP_001931782.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973388|gb|EDU40887.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 704
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGY 178
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCS 175
FV + E A A+ ML L K +P+ E +E +
Sbjct: 179 GFVHYETAEAANNAIKHVNGML-------LNEKKVFVG---HHIPKKERMSKFEEMKANF 228
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
IY NID V+ D + FE G++ + D Q +R FV + E+A AA++
Sbjct: 229 TNIYVKNIDLDVSDEDFRDLFEK-HGDITSASIARDDQGKSRGFGFVNYIKHEAASAAVD 287
Query: 235 C 235
Sbjct: 288 A 288
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + E+G +A
Sbjct: 49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 108
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 109 LNYTVIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDHAIDNKALHDTF 156
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +S FV + AE+A A+ +L
Sbjct: 157 -AAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGML 200
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ ++D+ + + L F G ++ C++ D N + FV F
Sbjct: 87 SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFE 146
Query: 127 DEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
+E A RA + G +L V V F R E E E+ +R +Y
Sbjct: 147 TQEAAERAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAREFTNVYI 195
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGA 238
N + + ++ F G +R++ D +R FV F E A A++ +G
Sbjct: 196 KNFGDDMDEEKLRDVFNKY-GNAMSIRVMTDDSGKSRGFGFVSFERHEDAQKAVDEMNGK 254
Query: 239 VLGSLPIRVSPSKTPVRPRA 258
+ PI V ++ V +A
Sbjct: 255 EMNGKPIYVGRAQKKVERQA 274
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ PVR++ S+ +P+ R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQR-----DPSL-------RKSGVGNIFIKNLDKSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A+ +L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGML 162
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G V +I D N L + F+E+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + + + + + I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSNHFHIFVGDLSNEVND 207
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
++ L S CG V R++ D + +AF + A AE A+++++ G LGS
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMD--GEWLGSRA 264
Query: 245 IR 246
IR
Sbjct: 265 IR 266
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGA-RAALSL 137
++Y D+D +VTE L LF VV R+C D N L +A++ F++ A RA +L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFDRPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D ++ FV+F ESA AA++ +L
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGML 200
>gi|357631741|gb|EHJ79210.1| sex-lethal [Danaus plexippus]
Length = 333
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 83 VSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFT-DEEGARAALSLAG 139
V+ + Q +TE+ L +F++ G + CR+ D F FV FT +E+ ARA + G
Sbjct: 65 VNYLPQTMTEKDLYAMFMSIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIETFNG 124
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
Y +R K + A P ED +E +Y TN+ + +T+ ++ F
Sbjct: 125 -----YQLRNKRLKVSYA------RPSGEDIKET---NLYVTNLPRAITEDQLETIFGKY 170
Query: 200 CGEVQRLRLLGDYQHST--RIAFVEFAM---AESAIAALNCSGAVLGSLPI 245
G + + +L D + T +AFV F A+ AIAALN GS P+
Sbjct: 171 -GRIVQKHILRDKSNGTPRGVAFVRFDKREEAQEAIAALNNVIPEGGSEPL 220
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 50 AFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 109
A + NGY +R+ + +++ +YV+++ + +TE+QL T+F G++V
Sbjct: 118 AIETFNGYQLRNKRLKVSYARPSGEDIKETNLYVTNLPRAITEDQLETIFGKYGRIVQKH 177
Query: 110 ICGDP-NSVLR-FAFVEFTDEEGARAALS 136
I D N R AFV F E A+ A++
Sbjct: 178 ILRDKSNGTPRGVAFVRFDKREEAQEAIA 206
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 32/186 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 137
++YV D+ ++++E L LF G ++ RIC D L +A+V F + + A AL
Sbjct: 7 SLYVGDLHEEISEALLFDLFHEVGPIISIRICRDAMTRKSLGYAYVNFQNPQDAERALD- 65
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L + V+ +P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 66 ---TLNYASVKGIPIRIMWSQRDPSI-------RKSGIGNIFIKNLDKSI---DNKALYD 112
Query: 198 S-----------VCGEVQRLRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGAVLGSL 243
+ VC ++ GD S FV F AE AIA +N G +L
Sbjct: 113 TFSAFGNILSCKVCQATKKGDNGGDNVESAGYGFVHFETQEAAEKAIAKIN--GMLLNGK 170
Query: 244 PIRVSP 249
+ V P
Sbjct: 171 QVFVGP 176
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 31/183 (16%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRIC---------GDPNSV 117
+Q+D IR++ +++ ++D+ + + L F G ++ C++C GD
Sbjct: 82 SQRDPSIRKSGIGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVCQATKKGDNGGDNVES 141
Query: 118 LRFAFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSED----ERE 172
+ FV F +E A A++ + G +L V V P F+ ++E E
Sbjct: 142 AGYGFVHFETQEAAEKAIAKINGMLLNGKQVFVGP-----------FVKKTERLKILSNE 190
Query: 173 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL-GDYQHSTRIAFVEFAMAESAIA 231
IY N+D V + ++ F S GE+Q ++ G+ S F+ FA SA+
Sbjct: 191 DSFTNIYVKNLDASVDEKELSEVF-SKFGEIQNAVVMRGENGASKEFGFINFADHASALI 249
Query: 232 ALN 234
A++
Sbjct: 250 AID 252
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS-LA 138
+YV ++D V +E+L F G + ++ D F FV F E A AL+ ++
Sbjct: 298 NLYVKNLDDSVDDERLRQEFSKFGDITSAKVMSDNKQSRGFGFVCFKTPEAANKALTEMS 357
Query: 139 GTMLGFYPVRV 149
G M+G P+ V
Sbjct: 358 GHMIGSKPLYV 368
>gi|115433970|ref|NP_001041743.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|52076599|dbj|BAD45501.1| nuclear protein -like [Oryza sativa Japonica Group]
gi|113531274|dbj|BAF03657.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|125568671|gb|EAZ10186.1| hypothetical protein OsJ_00013 [Oryza sativa Japonica Group]
gi|215712245|dbj|BAG94372.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768572|dbj|BAH00801.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 978
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 127
T + +V+++ V +S++ +T + + LF CG+VVDC I + A+VE++
Sbjct: 347 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKH----IAYVEYSK 402
Query: 128 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 160
+E A AAL+L +G P+ V LP KT +A N
Sbjct: 403 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 440
>gi|125524053|gb|EAY72167.1| hypothetical protein OsI_00016 [Oryza sativa Indica Group]
Length = 920
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 127
T + +V+++ V +S++ +T + + LF CG+VVDC I + A+VE++
Sbjct: 289 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKH----IAYVEYSK 344
Query: 128 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 160
+E A AAL+L +G P+ V LP KT +A N
Sbjct: 345 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 382
>gi|15128444|dbj|BAB62628.1| P0402A09.11 [Oryza sativa Japonica Group]
gi|20804433|dbj|BAB92130.1| P0455C04.5 [Oryza sativa Japonica Group]
Length = 990
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 127
T + +V+++ V +S++ +T + + LF CG+VVDC I + A+VE++
Sbjct: 359 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKH----IAYVEYSK 414
Query: 128 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 160
+E A AAL+L +G P+ V LP KT +A N
Sbjct: 415 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 452
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 130
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 131 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 188
A RA +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 147 AERAMQTLNGRRIHQSEIR----------VNWAYQSNNTNKEDTSNHFHIFVGDLSNEVN 196
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 243
+I L S G V R++ D + +AF E + AE A+++++ G LGS
Sbjct: 197 D-EILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMD--GEWLGSR 253
Query: 244 PIR 246
IR
Sbjct: 254 AIR 256
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 86/207 (41%), Gaps = 29/207 (14%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFT 126
+DE RRT++V + ++ + L T F G Q+V R+ G V +VEF
Sbjct: 166 NEDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGV---GYVEFK 222
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTI 178
+EE AA+ L G ML P+ IA + R E S +
Sbjct: 223 NEESVAAAIRLTGQMLLGIPI--------IAQLTEAEKNRQARNTESTSGHHHTAPFHRL 274
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCS 236
Y N+ +T+ D+ FE GE++ ++L D S AFV+FA E A AL +
Sbjct: 275 YVGNVHFSITEEDLTNVFEPF-GELEFVQLQKDETGRSKGYAFVQFANPEQARDALEKMN 333
Query: 237 GAVLGSLPIRVSPSKTPVRP--RAPRP 261
G L IRV P A RP
Sbjct: 334 GFELAGRAIRVGLGNDKFTPDTHANRP 360
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T +++ ++D + + L F G ++ C++ D + R +
Sbjct: 124 CRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDESGGSRGY 183
Query: 121 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + E A AA+ S+ G +L V V +P K ++ +E +
Sbjct: 184 GFVHYETAEAANAAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 234
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
IY NID + T + + FE GE+ L D + R FV + E A A++
Sbjct: 235 NIYVKNIDTETTDDEFRELFEKY-GEITSASLARDQEGKVRGFGFVNYIRHEDANKAVD 292
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + +G RA
Sbjct: 54 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 113
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ I+ N+D + + F
Sbjct: 114 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGHGNIFIKNLDAAIDNKALHDTF 161
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +R FV + AE+A AA+ +L
Sbjct: 162 -AAFGNILSCKVAQDESGGSRGYGFVHYETAEAANAAIKSVNGML 205
>gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
Length = 670
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
VYV ++ + ++ L F + G + + D N + R F FV F E AR A+ +L
Sbjct: 241 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 300
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
G +G Y R A + F +++ ++ + +Y N+D + ++
Sbjct: 301 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 360
Query: 194 LFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAA-LNCSGAVLGSLPIRVS 248
FE GEV +++ D + S FV FA E A A L +G ++G P+ V+
Sbjct: 361 KLFE-CFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVA 416
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD---PNSVLRFAFVEFTDEEGA-RAAL 135
++YV D++ V E+QL LF V +C D L + +V F E A RA
Sbjct: 61 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 120
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
+L T++ P+RV+ S +PT R+ ++ N++ + +
Sbjct: 121 NLNFTVVNGKPIRVMFSNR-----DPTL-------RKSGLANVFIKNLEPNIDNKSLYEM 168
Query: 196 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS 242
F S G + ++ D+ ++ F++F SA A+N +L +
Sbjct: 169 FSSF-GTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLAN 215
>gi|413916837|gb|AFW56769.1| hypothetical protein ZEAMMB73_720605 [Zea mays]
Length = 318
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 173 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQR 205
+ TIY TNIDKKVT+ D+KLFFES+CGEV R
Sbjct: 251 LSGGTIYRTNIDKKVTEADLKLFFESICGEVGR 283
>gi|255572397|ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223533496|gb|EEF35238.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 642
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T++V ++ QV + F G+VVD R D + + F VEF E A AL L
Sbjct: 387 KTLFVGNLPFQVERADVEDFFKGAGEVVDVRFALDQDQRFKGFGHVEFATIEAAHEALKL 446
Query: 138 AGTMLGFYPVRV--LPSKTAIAPVNPTFLPRSEDEREMCSRT--IYCTNIDKKVTQGDIK 193
G L VR+ + AP P + ++ S+T I+ DK + + +I+
Sbjct: 447 NGQSLNGREVRLDLARERGERAPYTPYSGKDNSFQKGGRSQTQKIFVRGFDKFLGEDEIR 506
Query: 194 LFFE---SVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
CGE+ R+ L DY+ +A+VEF A AL +G+ LG + V
Sbjct: 507 NSLGEHFKTCGEITRISLPTDYETGAIKGMAYVEFQDATGFNKALEFNGSQLGDQYLTVE 566
Query: 249 PSKTP 253
+K P
Sbjct: 567 EAKPP 571
>gi|195391714|ref|XP_002054505.1| GJ22770 [Drosophila virilis]
gi|194152591|gb|EDW68025.1| GJ22770 [Drosophila virilis]
Length = 401
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
++V D+ ++ +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 69 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 128
Query: 138 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 188
G LG + R P+ A + P ++ + T+YC I+ ++
Sbjct: 129 NGQWLGSRSIRTNWATRKPPATKADMNIKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 188
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
+I S G +Q +R+ D + AFV F+ E+A A+
Sbjct: 189 NEEILQKTFSPYGTIQEIRVFKDKGY----AFVRFSTKEAATHAI 229
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGA-RAALSL 137
++Y D+D +VTE L LF VV R+C D N L +A++ F++ A RA +L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFDRPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
S G + ++ D ++ FV+F ESA AA++ +L
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGML 200
>gi|398017732|ref|XP_003862053.1| RNA-binding protein, putative [Leishmania donovani]
gi|322500281|emb|CBZ35359.1| RNA-binding protein, putative [Leishmania donovani]
Length = 403
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 19/189 (10%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 129
+A + + V +S I T QL +F CG + D + AFV +T EE
Sbjct: 129 SADAERTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEE 184
Query: 130 GARAALSLAGTMLGFYPVRVL---PSKTAIAPVNPTFLPRSEDEREMCSRT--------I 178
AL L G M+ PV V P A AP + R +E S +
Sbjct: 185 ACEKALKLDGAMVNGNPVVVRPCPPRDDAPAPASRRDATRRGNESTTASAPSRRQLDVRV 244
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGA 238
+ VT+ ++ FF CG + + + + +AFV F AE+A A++ SG
Sbjct: 245 VVHGVPSDVTKEALRAFFSPDCGPLTDVFIKPEIG----VAFVAFTSAENAKRAISKSGE 300
Query: 239 VLGSLPIRV 247
+L +R+
Sbjct: 301 MLMGTRVRI 309
>gi|222635819|gb|EEE65951.1| hypothetical protein OsJ_21832 [Oryza sativa Japonica Group]
Length = 710
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
VYV ++ + ++ L F + G + + D N + R F FV F E AR A+ +L
Sbjct: 265 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 324
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
G +G Y R A + F +++ ++ + +Y N+D + ++
Sbjct: 325 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 384
Query: 194 LFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAA-LNCSGAVLGSLPIRVS 248
FE GEV +++ D + S FV FA E A A L +G ++G P+ V+
Sbjct: 385 KLFE-CFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVA 440
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD---PNSVLRFAFVEFTDEEGA-RAAL 135
++YV D++ V E+QL LF V +C D L + +V F E A RA
Sbjct: 85 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 144
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
+L T++ P+RV+ S +PT R+ ++ N++ + +
Sbjct: 145 NLNFTVVNGKPIRVMFSNR-----DPTL-------RKSGLANVFIKNLEPNIDNKSLYEM 192
Query: 196 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS 242
F S G + ++ D+ ++ F++F SA A+N +L +
Sbjct: 193 FSSF-GTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLAN 239
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGAR 132
RR++YV ++D T ++L F +CG V R G P FA++EF+D E R
Sbjct: 36 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFSDRESVR 92
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPT 162
A++L T+ ++V P +T I + T
Sbjct: 93 TAMALDETLFRGRVIKVSPKRTNIPGFSTT 122
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 157 APVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL-----RLLG 210
+P F + +ER + R+IY N+D T +++++F S CG V R+ R G
Sbjct: 17 SPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNS-CGHVNRVTIPYNRFTG 75
Query: 211 DYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
H A++EF+ ES A+ + I+VSP +T +
Sbjct: 76 ---HPKGFAYIEFSDRESVRTAMALDETLFRGRVIKVSPKRTNI 116
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 57 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDP 114
+ +G + R +E RTV+ + Q++ L F + G+V D R+ C
Sbjct: 151 FGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKT 210
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDER 171
A+VEF D E AL L+G L P+ V + K + P +P+
Sbjct: 211 RRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG---- 266
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESA 229
+ +Y ++ +T+ ++ FE G++ ++L+ D + S F+ F A+ A
Sbjct: 267 QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDA 325
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L P++V
Sbjct: 326 KKALEQLNGFELAGRPMKVG 345
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGAR 132
RR++YV ++D T ++L F +CG V R G P FA++EF+D E R
Sbjct: 65 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFSDRESVR 121
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPT 162
A++L T+ ++V P +T I + T
Sbjct: 122 TAMALDETLFRGRVIKVSPKRTNIPGFSTT 151
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 157 APVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL-----RLLG 210
+P F + +ER + R+IY N+D T +++++F S CG V R+ R G
Sbjct: 46 SPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNS-CGHVNRVTIPYNRFTG 104
Query: 211 DYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
H A++EF+ ES A+ + I+VSP +T +
Sbjct: 105 ---HPKGFAYIEFSDRESVRTAMALDETLFRGRVIKVSPKRTNI 145
>gi|327290521|ref|XP_003229971.1| PREDICTED: splicing factor 3B subunit 4-like [Anolis carolinensis]
Length = 417
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 37/223 (16%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 129
++D V+V D+ +V +E L F G + D R+ D NS + F+ F D+
Sbjct: 101 KEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKT 160
Query: 130 GARAAL-SLAGTMLGFYPVRV-----------------LPSKT--AIAPVNPTFLPRSED 169
A A+ ++ G LG +RV P T A AP+N P S D
Sbjct: 161 DAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYD 220
Query: 170 ----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
+ + T+Y N+ TQ D+ F+S+ G + +R+ D AFV+
Sbjct: 221 SVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDT 275
Query: 226 AE-SAIAALNCSGAVLGSLPIRVSPSK-----TPVRPRAPRPP 262
E +A+A + G ++ PI+ S K T +P P P
Sbjct: 276 HEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQPGGPLSP 318
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 78/195 (40%), Gaps = 23/195 (11%)
Query: 64 MNCRTSNAQQDEVIRRT-VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLR 119
MN E RR +YV ++ +VTE L +F G V +I D N L
Sbjct: 1 MNSMGGMGGPAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN 60
Query: 120 FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI 178
+ FVE+ D A AL +L G + +R VN + + E +
Sbjct: 61 YGFVEYMDMRAAETALQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTTGHYHV 110
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAAL 233
+ ++ +V + F S G + R++ D +AF + AE AIA +
Sbjct: 111 FVGDLSPEVNDEILGKAF-SAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 169
Query: 234 NCSGAVLGSLPIRVS 248
N G LGS IRV+
Sbjct: 170 N--GEWLGSRAIRVN 182
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 57 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDP 114
+ +G + R +E RTV+ + Q++ L F + G+V D R+ C
Sbjct: 125 FGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKT 184
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDER 171
A+VEF D E AL L+G L P+ V + K + P +P+
Sbjct: 185 RRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG---- 240
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESA 229
+ +Y ++ +T+ ++ FE G++ ++L+ D + S F+ F A+ A
Sbjct: 241 QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDA 299
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L P++V
Sbjct: 300 KKALEQLNGFELAGRPMKVG 319
>gi|125555900|gb|EAZ01506.1| hypothetical protein OsI_23538 [Oryza sativa Indica Group]
Length = 669
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 9/177 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
VYV ++ + ++ L F + G + + D N + R F FV F E AR A+ +L
Sbjct: 242 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 301
Query: 138 AGTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
G +G Y R A + F +++ ++ + +Y N+D + ++
Sbjct: 302 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 361
Query: 194 LFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAA-LNCSGAVLGSLPIRVS 248
FE GEV +++ D + S FV FA E A A L +G ++G P+ V+
Sbjct: 362 KLFE-CFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVA 417
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD---PNSVLRFAFVEFTDEEGA-RAAL 135
++YV D++ V E+QL LF V +C D + L + +V F E A RA
Sbjct: 62 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGSKSLGYGYVNFMSREDATRAME 121
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
+L T++ P+RV+ S +PT R+ ++ N++ + +
Sbjct: 122 NLNFTVVNGKPIRVMFSNR-----DPTL-------RKSGLANVFIKNLEPNIDNKSLYEM 169
Query: 196 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS 242
F S G + ++ D+ ++ F++F SA A+N +L +
Sbjct: 170 FSSF-GTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLAN 216
>gi|422292932|gb|EKU20233.1| splicing factor 3B subunit 4, partial [Nannochloropsis gaditana
CCMP526]
Length = 301
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 137
TVY +D++VTE+ L L G VV + D + + F FVEF EE A A+ +
Sbjct: 14 TVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDADYAVKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P+RV + S+D + + ++ N+ +V + D+
Sbjct: 74 M-NMVRMYGKPLRVNKA--------------SQDRKTVDVGANLFIGNLAAEVDEKDLYD 118
Query: 195 FFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPI 245
F + G Q +++ D H+ FV F E+A A+ C +GA LG PI
Sbjct: 119 TFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDSFEAADYAIECMNGAYLGGRPI 172
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGAR 132
E + ++YV ++D V+E L +F G V R+C D + L +A+V F D E +
Sbjct: 39 ENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGK 98
Query: 133 AALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
A+ L T + P R++ S+ R R+ S I+ N+ + D
Sbjct: 99 TAIEKLNYTAIKGRPCRIMWSQ------------RDPSMRKKGSGNIFIKNLHPDI---D 143
Query: 192 IKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC-SGAVLGSLPIRV 247
K +E SV G + ++ D ++ FV F E+A A++ +G +L + V
Sbjct: 144 NKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYV 203
Query: 248 SP 249
+P
Sbjct: 204 AP 205
>gi|147835778|emb|CAN72942.1| hypothetical protein VITISV_011270 [Vitis vinifera]
Length = 185
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 59 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-- 116
QG + A ++ + ++YV D++ V + QL LF G VV R+C D ++
Sbjct: 10 QGPGPAPNSAAGAGGNQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRR 69
Query: 117 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 176
L + +V +++ + A AL + L F P+ P + + +P+ R+ +
Sbjct: 70 SLGYGYVNYSNPQDAARALDV----LNFTPLNGKPLRIMYSHCDPSI-------RKSGTG 118
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI 218
I+ N+DK + + F S G + + L YQ++ R+
Sbjct: 119 NIFIKNLDKGIDHKALHDTF-SAFGNILSCKDLDTYQNNMRL 159
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 12/184 (6%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ ++L F G V +I D N +VEF EE
Sbjct: 204 EDERDRRTVFVQQLAARLRTKELHEFFEQAGPVAAAQIVKDRVSNRSKGVGYVEFKSEES 263
Query: 131 ARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 187
AAL L G L PV V P+ K + + +Y NI +
Sbjct: 264 LPAALQLTGQKLAGIPVIVQPTEAEKNRQVRTTENSNANGAQQNSVLFHRLYVGNIHFSI 323
Query: 188 TQGDIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEF---AMAESAIAALNCSGAVLGSL 243
T+ D++ F GE++ ++L D S FVE+ A A A+ +N G L
Sbjct: 324 TEPDLRTVF-GPFGELRFVQLQKEDNGRSRGYGFVEYNDPANAREALEKMN--GFDLAGR 380
Query: 244 PIRV 247
PIRV
Sbjct: 381 PIRV 384
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 123
N + AQQ+ V+ +YV +I +TE L T+F G++ ++ + N R + FV
Sbjct: 298 NSNANGAQQNSVLFHRLYVGNIHFSITEPDLRTVFGPFGELRFVQLQKEDNGRSRGYGFV 357
Query: 124 EFTDEEGARAAL-SLAGTMLGFYPVRV 149
E+ D AR AL + G L P+RV
Sbjct: 358 EYNDPANAREALEKMNGFDLAGRPIRV 384
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFA 224
+EDER+ RT++ + ++ ++ FFE G V +++ D S + +VEF
Sbjct: 203 TEDERDR--RTVFVQQLAARLRTKELHEFFEQ-AGPVAAAQIVKDRVSNRSKGVGYVEFK 259
Query: 225 MAESAIAALNCSGAVLGSLPIRVSPSK 251
ES AAL +G L +P+ V P++
Sbjct: 260 SEESLPAALQLTGQKLAGIPVIVQPTE 286
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 127
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 186 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 242
Query: 128 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
EE AA+ L G L P+ ++ ++ NP S + ++ +Y NI
Sbjct: 243 EESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEAT--SSNPNQIPFHRLYVGNIHF 300
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 243
+T+ D++ FE GE++ ++L + Q +R FV+F A AL +G L
Sbjct: 301 SITESDLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQFRDPSQAREALEKMNGFDLAGR 359
Query: 244 PIRVS 248
PIRV
Sbjct: 360 PIRVG 364
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 62 RRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 117
R CR +Q+D +RRT +++ ++D + + L F G ++ C++ +
Sbjct: 113 RNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATSESGS 172
Query: 118 LRFAFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
L + FV + E A AA+ ML Y +P K A + E+ R
Sbjct: 173 LGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVGHHIPRKERQAKI--------EESRAR 224
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAA 232
+ +YC N+D VT + + F + G++ L D ++ FV F + A A
Sbjct: 225 FT-NVYCKNVDADVTDEEFEKLF-TKYGKITSCVLQRDEDGKSKGFGFVNFENHDEAQTA 282
Query: 233 LN 234
++
Sbjct: 283 VD 284
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L +F G V R+C D L +A+V F + +G RA
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQ 106
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L +++ P R++ S+ +P R I+ N+D + + F
Sbjct: 107 LNYSLIRNRPCRIMWSQR-----DPAL-------RRTGQGNIFIKNLDAGIDNKALHDTF 154
Query: 197 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+ G + ++ S FV + AE+A AA+ + +G +L + V
Sbjct: 155 -AAFGNILSCKVATSESGSLGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVG 206
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 132 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 191
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE ++A + G +L V V +P K + DE +
Sbjct: 192 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKF---------DEMKANFT 242
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 233
IY NI+ +VT + + FE G+V L D + S FV F E A A+
Sbjct: 243 NIYVKNINPEVTDDEFRTLFEKY-GDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAV 300
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + T +G +A
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 122 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDVAIDNKALHDTF 169
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 170 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGML 213
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNS--VLRFAFVE 124
T + D V +++V D+ VT+ L F + V ++ D N+ + FV
Sbjct: 179 TGDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVR 238
Query: 125 FTDE-EGARAALSLAGTMLGFYPVRV---LPSKTA-IAPVNPTFLPRSEDEREMCSRTIY 179
F DE E ++A + G P+R+ P K++ P T S+ E + + TI+
Sbjct: 239 FGDESERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQPGGQTNGTSSQSEADSTNTTIF 298
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFA---MAESAIAALNC 235
+D VT D+K F S GE+ +++ +G FV+FA AE A+ LN
Sbjct: 299 VGGLDSNVTDEDLKQTF-SQYGEIASVKIPVG-----KGCGFVQFANRNNAEEALQKLN- 351
Query: 236 SGAVLGSLPIRVSPSKTPV 254
G ++G +R+S + P
Sbjct: 352 -GTMIGKQTVRLSWGRNPA 369
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI- 110
+K +G+ G + N +S ++ D T++V +D VT+E L F G++ +I
Sbjct: 270 RKSSGHQPGGQ-TNGTSSQSEADST-NTTIFVGGLDSNVTDEDLKQTFSQYGEIASVKIP 327
Query: 111 ----CGDPNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRV 149
CG FV+F + A AL L GTM+G VR+
Sbjct: 328 VGKGCG---------FVQFANRNNAEEALQKLNGTMIGKQTVRL 362
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 63 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 119
++N TS Q D ++V D+ ++ L F G++ +CRI DP ++
Sbjct: 77 KVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKS 136
Query: 120 --FAFVEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSK-TAIAPVN-----PTFL 164
+AFV F + A AA+ ++ G LG + R PSK AP + PTF
Sbjct: 137 KGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTF- 195
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 224
++ + T+YC V D+ S G++Q +R+ D + AF+ F
Sbjct: 196 DEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGY----AFIRFT 251
Query: 225 MAESAIAALNCS 236
E+A A+ +
Sbjct: 252 TKEAAAHAIEAT 263
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 21/196 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
DE +T+YV ++D VTE + TLF G+V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDP-YAFLEFTSHTAAAT 61
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL+ + VL + + +P P+++ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETHIL 112
Query: 193 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 247
+ F + GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR
Sbjct: 113 RDAF-APFGEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 248 SPS--KTPVRPRAPRP 261
+ S K P +P P
Sbjct: 170 NWSTRKPPSKPNEGAP 185
>gi|405961983|gb|EKC27707.1| Splicing factor 3B subunit 4 [Crassostrea gigas]
Length = 405
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 28/166 (16%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D +VTE L LFL G VV+ + D S + FVEF EE A A+ +
Sbjct: 14 TVYVGSLDDKVTEAILWELFLQAGPVVNVHMPKDRVTQSHQGYGFVEFMGEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P+RV + S ++ + I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIRVNKA--------------SAHQKNLDVGANIFIGNLDPEV---DEKL 115
Query: 195 FFESVCG-----EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
+++ + ++ D +S AF+ FA E+A AAL
Sbjct: 116 LYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFEAADAALEA 161
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 15/185 (8%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ +L F G V + +I D +VEF +EE
Sbjct: 172 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNEES 231
Query: 131 ARAALSLAGTMLGFYPV-----RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
AL L G L PV ++ A P P S + +Y NI
Sbjct: 232 VTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNS-----IPFHRLYVGNIHF 286
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 243
VT+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 287 NVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRDAGQAREALEKMNGFDLAGR 345
Query: 244 PIRVS 248
PIRV
Sbjct: 346 PIRVG 350
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 224
+EDER+ RT++ + ++ ++K FFE V G V +++ D Q S + +VEF
Sbjct: 171 TEDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVNEAQIVKDRISQRSKGVGYVEFK 227
Query: 225 MAESAIAALNCSGAVLGSLPI 245
ES AL +G L +P+
Sbjct: 228 NEESVTQALQLTGQKLLGIPV 248
>gi|330938161|ref|XP_003305701.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
gi|311317207|gb|EFQ86241.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
Length = 749
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGY 178
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCS 175
FV + E A A+ ML L K +P+ E +E +
Sbjct: 179 GFVHYETAEAANNAIKHVNGML-------LNEKKVFVG---HHIPKKERMSKFEEMKANF 228
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
IY NID V+ D + FE G++ + D Q +R FV + E+A AA++
Sbjct: 229 TNIYVKNIDLDVSDDDFRDLFEK-HGDITSASIARDDQGKSRGFGFVNYIKHEAASAAVD 287
Query: 235 C 235
Sbjct: 288 A 288
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + E+G +A
Sbjct: 49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 108
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 109 LNYTVIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDHAIDNKALHDTF 156
Query: 197 ESVCGEVQRLRLLGDY-QHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +S FV + AE+A A+ +L
Sbjct: 157 -AAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGML 200
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 31/168 (18%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
T YV ++D QV+EE L LF+ G VV+ + D NS + FVEF EE A A+ +
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDADYAIKV 85
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P+RV + S+D++ + ++ N+D V D KL
Sbjct: 86 L-NMIKLYGKPIRVNKA--------------SQDKKSVDVGANLFIGNLDPDV---DEKL 127
Query: 195 FFESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 234
+++ ++ R G+ + I++ F +++AI A+N
Sbjct: 128 LYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMN 175
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMA 226
D+ E+ R+IY N+D K T I +F+S CG V R+ +L D H +VEF
Sbjct: 1 DQEEIDGRSIYVGNVDYKSTHDQILAYFQS-CGTVNRITILSDKTTGHPKGCCYVEFLNK 59
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKT--PVRPRAP 259
ES A+ + ++ I+++P +T P R P
Sbjct: 60 ESINNAMALNDSIFNDRQIKITPKRTNLPYYMRNP 94
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA--FVEFTDEEG 130
Q+E+ R++YV ++D + T +Q+ F +CG V I D + +VEF ++E
Sbjct: 2 QEEIDGRSIYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFLNKES 61
Query: 131 ARAALSLAGTMLGFYPVRVLPSKTAI 156
A++L ++ +++ P +T +
Sbjct: 62 INNAMALNDSIFNDRQIKITPKRTNL 87
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 49 TAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
T + R + +G + R+ +E RT++ + Q++ L F + G+V D
Sbjct: 127 TLSRSRQPFIKGASPLTNRSDELTPEERDARTIFCMQLSQRIRARDLEEFFSSVGKVQDV 186
Query: 109 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 163
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 187 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 246
Query: 164 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 221
+P+ + +Y ++ +T+ +K FE G+++ ++L+ D + S F+
Sbjct: 247 MPKG----QTGPMRLYVGSLLFNITEEMLKGIFEPF-GKIENIQLIMDPETGRSKGYGFL 301
Query: 222 EFAMAESAIAAL-NCSGAVLGSLPIRVS 248
F A+ A AL +G L P++V
Sbjct: 302 TFRNADDAKKALEQLNGFELAGRPMKVG 329
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G VV +I D N + + FVEF D A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAA 146
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + S + + + I+ ++ +V
Sbjct: 147 ERAMQTLNGRRIHQSEIR----------VNWAYQSNSTSKEDTSNHFHIFVGDLSNEVND 196
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIR 246
+ F S G V R++ D + S FV F A ALN G LGS IR
Sbjct: 197 EVLTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIR 255
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 30/207 (14%)
Query: 73 QDEVIRRT---VYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVE 124
+DE+ R+T VYV I + +E + T F +CG V + R+ G P +A V
Sbjct: 53 KDEIDRKTEATVYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQDSGKPRG---YAHVV 109
Query: 125 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAP--VNPTFLPRSEDEREMCS---RTIY 179
F DE AL L G L F R L + A AP V ++++ + RT+Y
Sbjct: 110 FDDEAALEKALELDGQYL-FN--RYLSIRRAEAPRAVEMALKEKTQNATKKAVKGCRTVY 166
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVEFAMAESAIAALNCS 236
+ +V + I+ S CG + +RL + H+ ++ +VEF+ + A+AA S
Sbjct: 167 IKQLPYEVEEDTIRQALAS-CGTITSVRLP-IWNHTKKLKGFGYVEFSSEDEALAAARRS 224
Query: 237 GAVLG------SLPIRVSPSKTPVRPR 257
G +G SL + S K R R
Sbjct: 225 GMKIGDRMVLISLDVAGSAPKASFRQR 251
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 25/189 (13%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 131
DE RRTV+V + ++ +L F G VVD +I D +VEF +EE
Sbjct: 153 DERDRRTVFVQQLAARLRSRELKEFFQQVGDVVDAQIVKDRVSGRSKGVGYVEFKEEESV 212
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIYCTNI 183
+ A+ L G L P+ IA + R E + +Y NI
Sbjct: 213 QKAIQLTGQKLLGIPI--------IAQLTEAEKNRQARNTEGTATQSNGIPFHRLYVGNI 264
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALNCSGAV 239
+T+ D+K FE GE++ ++L + ++ + F++ A A+ A+ +N G
Sbjct: 265 HFSITEDDLKNVFEPF-GELEFVQLQKEEAGRSKGYGFVQFIDPAQAKEALEKMN--GFE 321
Query: 240 LGSLPIRVS 248
L PIRV
Sbjct: 322 LAGRPIRVG 330
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL-S 136
++YV D+ Q VT+ QL +F G V + RIC D + L +A+V + + A AL +
Sbjct: 9 SLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADAERALDT 68
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ R++ S+ R R+ I+ N+DK V D K F
Sbjct: 69 LNNTLVKGKACRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSV---DHKALF 113
Query: 197 E--SVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAA-LNCSGAVLGSLPIRVSPSKT 252
+ S G + +++ D + S FV + +SA A + +G ++ + V P K+
Sbjct: 114 DTFSAFGNILSCKVVTDETNVSKGFGFVHYESQDSADKAIMKVNGMIINDQKVFVGPFKS 173
>gi|356536490|ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
Length = 394
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 138
+YV I TE+ + + F +CG + VDC + A + F E A+ AL+L
Sbjct: 151 IYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALD 210
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
G +G +++ P K A F P + E +R IY N+ +T+ +++ FF +
Sbjct: 211 GADMGGLFLKIQPYKATRANKASDFAP---EILEGYNR-IYVGNLSWDITEEELRKFFNN 266
Query: 199 VCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
E+ LR D + A V+F ++S AL VL P+R+S
Sbjct: 267 S--EITSLRFGMDKETGEFRGYAHVDFGDSQSLKKALALDQNVLFGRPVRIS 316
>gi|242020567|ref|XP_002430724.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515914|gb|EEB17986.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 470
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 136
IRRTV ++++D+ + + + LF G+V R C P +A VEFTD+ AAL
Sbjct: 151 IRRTVVITNLDRSIGSQNVIELFSKAGEVKYVRFCFRPGDTANYALVEFTDQTSIIAALK 210
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNP 161
+ G L ++V S AI P
Sbjct: 211 MNGMQLAGNTIKVYHSIQAIVKPQP 235
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 117 VLRFAFVEFTDEE--------GARAALSLAGTMLGFYPVRVLPSKT-----AIAPVNPTF 163
V+ F+ + DE+ G + A + + GF P +VL + P+ P
Sbjct: 80 VVPFSSNDIPDEQKAFELTRPGPKLAPGVTNQLEGFPPNQVLVTHDPRLIEHNLPLYPP- 138
Query: 164 LPRSEDER--EMCSRTIYCTNIDKKV-TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF 220
LP + D + RT+ TN+D+ + +Q I+LF S GEV+ +R + A
Sbjct: 139 LPSNTDSNTLDEIRRTVVITNLDRSIGSQNVIELF--SKAGEVKYVRFCFRPGDTANYAL 196
Query: 221 VEFAMAESAIAALNCSGAVLGSLPIRV 247
VEF S IAAL +G L I+V
Sbjct: 197 VEFTDQTSIIAALKMNGMQLAGNTIKV 223
>gi|260815191|ref|XP_002602357.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
gi|229287666|gb|EEN58369.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
Length = 620
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D S F FV F
Sbjct: 88 SQRDPSLRKSGVGNVFIKNLDKSIDNKAIYDTFSAFGNILSCKVAQDETGSSKGFGFVHF 147
Query: 126 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCSRTIY 179
+E A A++ + G ML V V F+PRSE E + IY
Sbjct: 148 ETQEAADEAMAKVNGMMLNGKKVYV-----------GRFVPRSERLAAMGEAQKRFTNIY 196
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 232
N K ++ FFE V + D HS FV + +SA A
Sbjct: 197 VKNFGDKWDDDKLRDFFEKYGKVVSAKVMTDDMGHSRGFGFVSYEEPDSAGKA 249
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+D +TE L F G V+ R+C D L +A+V F A AL
Sbjct: 13 SLYVGDLDPDITEAMLYEKFSPAGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDT 72
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F ++ P + + +P+ R+ ++ N+DK + I F
Sbjct: 73 ----MNFDTIKGKPMRIMWSQRDPSL-------RKSGVGNVFIKNLDKSIDNKAIYDTF- 120
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
S G + ++ D S++ FV F E+A A+ +G +L + V
Sbjct: 121 SAFGNILSCKVAQDETGSSKGFGFVHFETQEAADEAMAKVNGMMLNGKKVYVG 173
>gi|119497981|ref|XP_001265748.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri NRRL
181]
gi|119413912|gb|EAW23851.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri NRRL
181]
Length = 1281
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ E + LF G++VD R N+ RF +V+F A A +L
Sbjct: 889 TLFVTNFPSTADESYIRNLFREYGEIVDIRFPSLKYNTHRRFCYVQFKSSGDAHNATTLN 948
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE--MCSRTIYCTNIDKKVTQGDIKLFF 196
GT +G V + +PT R ED R I+ +NID K +GD+K F
Sbjct: 949 GTRVGSDLNLV------VKISDPT---RREDRHGPVYEGREIHISNIDWKANEGDLKEVF 999
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+ G ++ +R+ ++ ++ F+ E A AAL S P++V
Sbjct: 1000 QKY-GTIETVRIPRKVDGGSKGFGYIVFSTKEEAEAALAMHEQEFRSRPLQV 1050
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR- 109
F +RN G R N +E RTV+V + Q++ L F + G+V D R
Sbjct: 116 FGRRNRSPLGLRS-NSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRL 174
Query: 110 -ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLP 165
+C A++EF D E AL L+G L P+ V + K + P +P
Sbjct: 175 IVCNKTRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMP 234
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 223
++ +Y ++ +T+ ++ FE G++ ++L+ D + S F+ F
Sbjct: 235 KN----MTGPMRLYVGSLHFNITEDMLRSIFEPF-GKIDNIQLIMDPETGRSKGYGFIAF 289
Query: 224 AMAESAIAAL-NCSGAVLGSLPIRVS 248
E A AL +G L P++V
Sbjct: 290 RNCEDAKKALEQLNGFELAGRPMKVG 315
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 133
E +R +Y+ +D +VTE+ L +F T G V +I D NS L + FVE+ D A
Sbjct: 88 EPNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 134 ALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A+S L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 148 AMSTLNGRRVHQSEIR----------VNWAYQSNNNNKEDTSNHFHIFVGDLSNEVND-E 196
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ L S G V R++ D + +AF E AE A+++++ G LGS IR
Sbjct: 197 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMD--GEWLGSRAIR 254
>gi|307095208|gb|ADN29910.1| poly A binding protein cytoplasmic 1 isoform 1-like protein
[Triatoma matogrossensis]
Length = 341
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 23/184 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + + + FV F
Sbjct: 89 SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGSSKGYGFVHF 148
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML L K F+PR E E+E+ + +Y
Sbjct: 149 ETEEAATKSIDKVNGML-------LNGKKVFVG---KFIPRKEREKELGEKAKLFTNVYV 198
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSG 237
N + T +K FE ++ Q S FV F AE A+ LN
Sbjct: 199 KNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQKSRGFGFVAFEDPEAAERAVEDLNGKE 258
Query: 238 AVLG 241
+ G
Sbjct: 259 IIEG 262
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VT+ L F + G V+ R+C D L +A+V F A AL +
Sbjct: 14 SLYVGDLHSDVTKAMLFEKFSSAGPVLSIRVCKDMITRRSLGYAYVNFQQPADAERALDT 73
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ L P+R++ S+ +P+ R+ ++ N+DK + D K +
Sbjct: 74 MNFDTLKGRPIRIMWSQR-----DPSL-------RKSGVGNVFIKNLDKNI---DNKAMY 118
Query: 197 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ S G + ++ D S++ FV F E+A +++ +L
Sbjct: 119 DTFSAFGNILSCKVAQDESGSSKGYGFVHFETEEAATKSIDKVNGML 165
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 26/191 (13%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ L F G V + +I D +VEF +EE
Sbjct: 179 EDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNEES 238
Query: 131 ARAALSLAGTMLGFYPV-----------RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
AL L G L P+ +V S+TA +P +P +Y
Sbjct: 239 VTQALQLTGQKLLGIPIIVQLTEAEKNRQVRNSETATG-AHPNSIP---------FHRLY 288
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSG 237
NI VT+ D++ FE GE++ ++L D +R FV++ A A AL +G
Sbjct: 289 VGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNG 347
Query: 238 AVLGSLPIRVS 248
L PIRV
Sbjct: 348 FDLAGRPIRVG 358
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFA 224
+EDER+ RT++ + ++ D+K FFE V G V +++ D Q S + +VEF
Sbjct: 178 TEDERDR--RTVFVQQLAARLRTRDLKAFFEKV-GPVNEAQIVKDRISQRSKGVGYVEFK 234
Query: 225 MAESAIAALNCSGAVLGSLPI 245
ES AL +G L +PI
Sbjct: 235 NEESVTQALQLTGQKLLGIPI 255
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMA 226
D+ E+ SR++Y N+D K T I +F+S CG V R+ +L D H +VEF
Sbjct: 94 DQEEIDSRSVYVGNVDYKSTHDQILAYFQS-CGTVNRITILSDKTTGHPKGCCYVEFVNK 152
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKT 252
ES I A+ + + ++++P +T
Sbjct: 153 ESIINAMALNDSFFNERQLKITPKRT 178
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA--FVEFTD 127
N Q+E+ R+VYV ++D + T +Q+ F +CG V I D + +VEF +
Sbjct: 92 NTDQEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVN 151
Query: 128 EEGARAALSLAGTMLGFYPVRVLPSKTAI 156
+E A++L + +++ P +T +
Sbjct: 152 KESIINAMALNDSFFNERQLKITPKRTNL 180
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 128 CRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 187
Query: 121 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + E A A+ ++ G +L V V +P K ++ +E +
Sbjct: 188 GFVHYETAEAANNAIKAVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 238
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 234
+Y NID +VT + + FE G++ L D + S FV F ESA A++
Sbjct: 239 NVYVKNIDLEVTDDEFRELFEKY-GQITSASLAHDNETGKSRGFGFVNFVKHESAAKAVD 297
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + ++G +A
Sbjct: 58 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSDDGEKALEE 117
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 118 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDGAIDNKALHDTF 165
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + AE+A A+ +L
Sbjct: 166 -AAFGNILSCKVAQDENGNSKGYGFVHYETAEAANNAIKAVNGML 209
>gi|403302777|ref|XP_003942029.1| PREDICTED: splicing factor 3B subunit 4 [Saimiri boliviensis
boliviensis]
Length = 424
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG-----EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
+++ + ++ D +S AF+ FA +++ AA+ +G L + PI VS
Sbjct: 117 YDTFSAFGVILQTPKIMQDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVS 175
>gi|422295420|gb|EKU22719.1| splicing factor 3B subunit 4 [Nannochloropsis gaditana CCMP526]
Length = 274
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 137
TVY +D++VTE+ L L G VV + D + + F FVEF EE A A+ +
Sbjct: 14 TVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDADYAVKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P+RV + S+D + + ++ N+ +V + D+
Sbjct: 74 M-NMVRMYGKPLRVNKA--------------SQDRKTVDVGANLFIGNLAAEVDEKDLYD 118
Query: 195 FFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPI 245
F + G Q +++ D H+ FV F E+A A+ C +GA LG PI
Sbjct: 119 TFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDSFEAADYAIECMNGAYLGGRPI 172
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 126
++ EV R+V+V ++D T EQL F CG + + C R G P FA+VEF
Sbjct: 80 EKIEVDSRSVFVGNVDYGATAEQLEAHFHGCGAINRVTILCDRYSGRPKG---FAYVEFA 136
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
D+E A+A+L++ T+ ++VL +T + T R + R +Y
Sbjct: 137 DKESAQASLAMTDTLFRGRQIKVLEKRTNRPGMGNTRARRPYGRARVVYRYVY 189
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEF 223
+E++ E+ SR+++ N+D T ++ F CG + R+ +L D ++S R A+VEF
Sbjct: 78 TEEKIEVDSRSVFVGNVDYGATAEQLEAHFHG-CGAINRVTILCD-RYSGRPKGFAYVEF 135
Query: 224 AMAESAIAALNCSGAVLGSLPIRVSPSKTPVRP-----RAPRP 261
A ESA A+L + + I+V +T RP RA RP
Sbjct: 136 ADKESAQASLAMTDTLFRGRQIKVLEKRTN-RPGMGNTRARRP 177
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 64 MNCRTSNAQQDEVI---------RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 114
++CR +++EV +RTV+ I + E + F G+V D R+ D
Sbjct: 13 LSCRRHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 72
Query: 115 NS--VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK--------TAIAPVNPTFL 164
NS ++EF D A++L+G L PV V PS+ T A P L
Sbjct: 73 NSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGL 132
Query: 165 --PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAF 220
P S +R +Y N+ +T+ ++ FE G V+ ++L D + H F
Sbjct: 133 IGPYSG-----GARRLYVGNLHFNITEDQLRQVFEPF-GTVELVQLPTDLETGHCKGFGF 186
Query: 221 VEFAMAESAIAALNCSG 237
V+FA E A AA + +G
Sbjct: 187 VQFARLEDARAAQSLNG 203
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVE 222
P ++ ER+ RT++ I K + D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 28 PEADPERDQ--RTVFAYQICLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYIE 84
Query: 223 FAMAESAIAALNCSGAVLGSLPIRVSPSKT 252
F A S A+ SG L P+ V PS+
Sbjct: 85 FYDAMSVPMAIALSGQPLLGQPVMVKPSEA 114
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL-----RFAFVEFTDEE 129
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPG 146
Query: 130 GA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKV 187
A RA +L G + +R VN + S + + + I+ ++ +V
Sbjct: 147 AAERAMQTLNGRRIHQSEIR----------VNWAYQSNSTSKEDTSNHFHIFVGDLSNEV 196
Query: 188 TQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLP 244
+ F S G V R++ D + S FV F A ALN G LGS
Sbjct: 197 NDEVLTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRA 255
Query: 245 IR 246
IR
Sbjct: 256 IR 257
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 234
T+ N+D K + DI FF V G+V+ ++ + D + S +A+VEF ES I AL+
Sbjct: 156 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIKALS 215
Query: 235 CSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
+G +L + PI+V S+ + RA + H
Sbjct: 216 VNGYMLKNRPIKVQSSQAE-KNRAAKATKH 244
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
gi|386781627|ref|NP_001248161.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|114559210|ref|XP_513768.2| PREDICTED: splicing factor 3B subunit 4 isoform 4 [Pan troglodytes]
gi|397492924|ref|XP_003817370.1| PREDICTED: splicing factor 3B subunit 4 [Pan paniscus]
gi|402856043|ref|XP_003892612.1| PREDICTED: splicing factor 3B subunit 4 [Papio anubis]
gi|426331272|ref|XP_004026606.1| PREDICTED: splicing factor 3B subunit 4 [Gorilla gorilla gorilla]
gi|2500587|sp|Q15427.1|SF3B4_HUMAN RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Pre-mRNA-splicing factor SF3b 49 kDa subunit;
AltName: Full=SF3b50; AltName:
Full=Spliceosome-associated protein 49; Short=SAP 49
gi|556217|gb|AAA60300.1| spliceosomal protein [Homo sapiens]
gi|13279089|gb|AAH04273.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|15530216|gb|AAH13886.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960588|emb|CAI12648.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960980|emb|CAI12554.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|60688325|gb|AAH90883.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|119573980|gb|EAW53595.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|123989960|gb|ABM83897.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|123999284|gb|ABM87219.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|157928508|gb|ABW03550.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|261859948|dbj|BAI46496.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|355745635|gb|EHH50260.1| hypothetical protein EGM_01064 [Macaca fascicularis]
gi|380808686|gb|AFE76218.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|383415041|gb|AFH30734.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|410207952|gb|JAA01195.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410251462|gb|JAA13698.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410292418|gb|JAA24809.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410337561|gb|JAA37727.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
Length = 424
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like [Monodelphis
domestica]
Length = 424
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|449436259|ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
gi|449489082|ref|XP_004158209.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
Length = 251
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 76 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARA 133
V R +Y+ +I + V E+L + G V + D S RFAFV E A A
Sbjct: 71 VAERKLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANA 130
Query: 134 AL-SLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
A+ L T +G ++V + K + V+ +FL E + +Y NI V+
Sbjct: 131 AIEKLNETEVGGRKIKVNITEKPVVNTVDMSFLQAEESQFIDSPYKVYVGNISSTVSTET 190
Query: 192 IKLFFESVCGEV--QRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
+K FF S G+V ++ + S+ FV F+ E AA++ + A+L PIRV+
Sbjct: 191 LKNFF-SEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVDAAISSFNNALLEGQPIRVN 249
>gi|410910988|ref|XP_003968972.1| PREDICTED: splicing factor 3B subunit 4-like [Takifugu rubripes]
Length = 397
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 24/195 (12%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFT 126
Q E TV+V D+ VT+ L F + +VV R G + FV F
Sbjct: 168 QAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKG---YGFVRFG 224
Query: 127 DE-EGARAALSLAGTMLGFYPVRVLPSKT----AIAPVNPTFLPRSEDEREMCSRTIYCT 181
DE E RA + G P+R P+ + P + ++ E + + TI+
Sbjct: 225 DESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNQGESDPTNTTIFVG 284
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGA 238
+D+ V + D+K F GE+ +++ R FV++A AE A++ LN G
Sbjct: 285 ALDQSVIEDDLKSVFGQF-GELVHVKIPA----GKRCGFVQYANRACAEQALSLLN--GT 337
Query: 239 VLGSLPIRVSPSKTP 253
LG IR+S ++P
Sbjct: 338 QLGGQSIRLSWGRSP 352
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 69 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 128
N + + T++V +DQ V E+ L ++F G++V +I + R FV++ +
Sbjct: 269 GNQGESDPTNTTIFVGALDQSVIEDDLKSVFGQFGELVHVKIP----AGKRCGFVQYANR 324
Query: 129 EGARAALS-LAGTMLGFYPVRV 149
A ALS L GT LG +R+
Sbjct: 325 ACAEQALSLLNGTQLGGQSIRL 346
>gi|296228655|ref|XP_002759903.1| PREDICTED: splicing factor 3B subunit 4 [Callithrix jacchus]
Length = 424
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|195150897|ref|XP_002016387.1| GL11548 [Drosophila persimilis]
gi|194110234|gb|EDW32277.1| GL11548 [Drosophila persimilis]
Length = 640
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVAIDEKGNSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANTSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +K FFE G++ +++ ++ +A+ AE+A+ ALN
Sbjct: 188 KNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQALN 244
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ Q + E L F T G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F +R P + + +P+ R ++ N+DK + I F
Sbjct: 62 ---TMNFDLIRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKGIDNKAIYDTF- 110
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
S G + ++ D + +++ FV F E+A +++ +G +L + V
Sbjct: 111 SAFGNILSCKVAIDEKGNSKGYGFVHFETEEAANTSIDRVNGMLLNGKKVYVG 163
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D++ V EEQL LF Q+ R+C D S L +A+V F + + A A+ L
Sbjct: 36 SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMEL 95
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ ++ N+D + + F
Sbjct: 96 ----LNFTPLNGKPIRIMFSQRDPSI-------RKSGHGNVFIKNLDTSIDNKALHDTF- 143
Query: 198 SVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAAL 233
+ G V ++ L S FV+F E+A A+
Sbjct: 144 AAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAI 180
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D IR++ V++ ++D + + L F G V+ C++ D + + + FV+F
Sbjct: 111 SQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQF 170
Query: 126 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCT 181
+EE A+ A+ L G ++ V V F+ R E E+ S +Y
Sbjct: 171 DNEEAAQNAIKRLNGMLINDKQVYV-----------GLFIRRQEREQTNGSPKFTNVYVK 219
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N+ + T D+K F G + ++ D +R FV F +SA AA+
Sbjct: 220 NLSETYTDEDLKKLF-GPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAV 271
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS-L 137
VYV ++ + T+E L LF G + + D N R F FV F + + A AA+ L
Sbjct: 215 NVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERL 274
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER-----EMCSRTIYCTNIDKKVTQGDI 192
GT + V + A + E ER ++ +Y N+D + +
Sbjct: 275 NGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKL 334
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
K F S G + +++ D ++ FV F+ E A ALN +G ++G P+ V+
Sbjct: 335 KDLF-SEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVA 391
>gi|351705667|gb|EHB08586.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 486
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|91079430|ref|XP_968120.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270004395|gb|EFA00843.1| hypothetical protein TcasGA2_TC003731 [Tribolium castaneum]
Length = 393
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 29/180 (16%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 137
T+YV +D +VTE L LF+ G +V+ + D +++ + FVEF EE A A+ +
Sbjct: 14 TIYVGGLDDKVTESLLWELFVQSGPLVNVHMPKDRVTMMHQGYGFVEFMGEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P+RV + S ++ + I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIRVNKA--------------SAHQKNLDVGANIFIGNLDPEV---DEKL 115
Query: 195 FFESVCG-----EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
+++ + ++ D +S AF+ FA E++ A++ +G L + PI VS
Sbjct: 116 LYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINFASFEASDASIEAMNGQYLCNRPISVS 175
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
gi|58865472|ref|NP_001011951.1| splicing factor 3B subunit 4 [Rattus norvegicus]
gi|354472911|ref|XP_003498680.1| PREDICTED: splicing factor 3B subunit 4-like [Cricetulus griseus]
gi|81910895|sp|Q6AYL5.1|SF3B4_RAT RecName: Full=Splicing factor 3B subunit 4
gi|81914822|sp|Q8QZY9.1|SF3B4_MOUSE RecName: Full=Splicing factor 3B subunit 4
gi|20071686|gb|AAH26567.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|26338948|dbj|BAC33145.1| unnamed protein product [Mus musculus]
gi|37537250|gb|AAH24418.3| Splicing factor 3b, subunit 4 [Mus musculus]
gi|50925599|gb|AAH78997.1| Splicing factor 3b, subunit 4 [Rattus norvegicus]
gi|55391441|gb|AAH85273.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|74183317|dbj|BAE22576.1| unnamed protein product [Mus musculus]
gi|148706922|gb|EDL38869.1| splicing factor 3b, subunit 4 [Mus musculus]
gi|149030610|gb|EDL85647.1| rCG51900 [Rattus norvegicus]
gi|344238680|gb|EGV94783.1| Splicing factor 3B subunit 4 [Cricetulus griseus]
Length = 424
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|121710854|ref|XP_001273043.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
gi|119401193|gb|EAW11617.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
Length = 1310
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ E + LF G+++D R N+ RF +V+F E A A+ L
Sbjct: 916 TLFVTNFPSTADESYIRNLFHEYGEIIDVRFPSLKYNTHRRFCYVQFKSAEDAHNAVQLD 975
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKLF 195
G+ +G + + V P + +R R I+ +NID K ++ D+K
Sbjct: 976 GSKVG----------SDLNLVVKISDPSRKQDRHGPIYEGREIHVSNIDWKASEDDLKDL 1025
Query: 196 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
F S G V+ +R+ ++ ++ F+ E A AAL S P++V
Sbjct: 1026 F-SKYGRVETVRIPRKVDGGSKGFGYIVFSTKEEANAALAMHEQEFRSRPLQV 1077
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 29/183 (15%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
R ++VS+ID + +E+ L LF G+V RI + + F ++ F+ +E A AAL++
Sbjct: 1006 REIHVSNIDWKASEDDLKDLFSKYGRVETVRIPRKVDGGSKGFGYIVFSTKEEANAALAM 1065
Query: 138 AGTMLGFYPV-------------------RVLPSKTAIAPVNPTFLPRSEDE---REMCS 175
P+ RV S++ N T +E + +E +
Sbjct: 1066 HEQEFRSRPLQVRLSTPQGAKRSATTIVNRVGKSQSPAPETNGTKSQSAEPDGAAKERSA 1125
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA-MAESAIAALN 234
RT+ NI V ++ E GE+ ++ L D+Q A VEFA + + A+L
Sbjct: 1126 RTLGLMNIPDTVNDARVRALVEPY-GELIKVVLRPDHQG----AIVEFADVNHAGKASLE 1180
Query: 235 CSG 237
G
Sbjct: 1181 LEG 1183
>gi|194036296|ref|XP_001926524.1| PREDICTED: splicing factor 3B subunit 4 [Sus scrofa]
gi|344275508|ref|XP_003409554.1| PREDICTED: splicing factor 3B subunit 4-like [Loxodonta africana]
gi|417400717|gb|JAA47284.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 424
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|449476847|ref|XP_002193793.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Taeniopygia guttata]
Length = 928
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 39/202 (19%)
Query: 80 TVYVSDIDQQVTE--EQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
TV+VS++ + E +L LF +CG+VV+ R + R + +V+F +EE AR AL+
Sbjct: 670 TVFVSNLSYTMAEPEAKLRELFGSCGEVVEIRAVFNNKGTFRGYCYVQFREEEAARQALA 729
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF- 195
L T + P+ V P NP F Y T ++K KLF
Sbjct: 730 LDRTAVEGRPMFVSP--CVDKNKNPDF-----------KVFRYSTTLEKH------KLFI 770
Query: 196 -----------FESVC---GEVQRLRLLGDYQHSTR-IAFVEF-AMAESAIAALNCSGAV 239
E VC G V+ +RL+ + + +A+VE+ + A+++ A L G
Sbjct: 771 SGLPFSCTKEELEEVCKAHGNVKDIRLVTNRAGKPKGLAYVEYESEAQASQAVLKMDGLT 830
Query: 240 LGSLPIRVSPSKTPVRPRAPRP 261
+ I+V S P+R RP
Sbjct: 831 MKDHVIKVMISNPPLRKLPDRP 852
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 64 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAADR 123
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + S + + I+ ++ +V D
Sbjct: 124 AMQTLNGRRVHQSEIR----------VNWAYQANSSGKEDTSGHFHIFVGDLSNEVND-D 172
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
I S G V R++ D + +AF + AE A+++++ G LGS IR
Sbjct: 173 ILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD--GEWLGSRAIR 230
>gi|115390925|ref|XP_001212967.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
gi|121739603|sp|Q0CR95.1|PABP_ASPTN RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|114193891|gb|EAU35591.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
Length = 753
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 178
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 178
FV + E A A+ ML L K + + R EM + +
Sbjct: 179 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 231
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
Y N+D+++++ + + FE GE+ L D + +R FV ++ +SA AA++
Sbjct: 232 YIKNLDQEISEEEFRQMFEKF-GEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVD 287
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 49 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 108
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 109 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDAAIDNKALHDTF 156
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 157 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 200
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 13/200 (6%)
Query: 57 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDP 114
+ +G + R +E RTV+ + Q++ L F + G+V D R+ C
Sbjct: 125 FGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKT 184
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDER 171
A+VEF D E AL L+G L P+ V + K + P +P+
Sbjct: 185 RRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG---- 240
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESA 229
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F A+ A
Sbjct: 241 QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPXTGRSKGYGFLTFRNADDA 299
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L P++V
Sbjct: 300 KKALEQLNGFELAGRPMKVG 319
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
EV +R+VYV ++D T E+L + F +CGQV I G P +A++EF ++
Sbjct: 42 EVDQRSVYVGNVDYGSTAEELESHFHSCGQVNRVTILCDKFSGHPKG---YAYIEFEEKS 98
Query: 130 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 162
+AA+ L ++ ++VLP +T + ++ T
Sbjct: 99 SVKAAVELDESVFRGRVIKVLPKRTNMPGISST 131
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 32/215 (14%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 129
++D V+V D+ +V +E L F G + D R+ D NS + F+ F D+
Sbjct: 100 KEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKT 159
Query: 130 GARAAL-SLAGTMLGFYPVRV---------LPSKT----------AIAPVNPTFLPRSED 169
A A+ ++ G LG +RV PS T A AP+N P S +
Sbjct: 160 DAEQAIATMNGEWLGSRAIRVNWANQKTQGGPSPTMPGRPSGMGGAPAPINFQGGPLSYE 219
Query: 170 ----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 225
+ + T+Y N+ TQ D+ F+S+ G + +R+ D AFV+
Sbjct: 220 SVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDT 274
Query: 226 AE-SAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 259
E +A+A + G ++ PI+ S K AP
Sbjct: 275 HEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTAP 309
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 83/207 (40%), Gaps = 36/207 (17%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 134
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 15 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 74
Query: 135 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L +L G + +R VN + + E ++ ++ +V +
Sbjct: 75 LQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLG 124
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
F S G + R++ D +AF + AE AIA +N G LGS IRV+
Sbjct: 125 KAF-SAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRVN 181
Query: 249 ---------PSKT-PVRPR----APRP 261
PS T P RP AP P
Sbjct: 182 WANQKTQGGPSPTMPGRPSGMGGAPAP 208
>gi|380494250|emb|CCF33289.1| Poly(A) RNA binding protein [Colletotrichum higginsianum]
Length = 677
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 135 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 194
Query: 121 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 195 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 243
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
IY NI +VT + + F + G+V L D + +R FV F E+A A+
Sbjct: 244 FTNIYIKNISGEVTDDEFRDLF-TPFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAKAV 302
Query: 234 N 234
+
Sbjct: 303 D 303
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + T +G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEE 124
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 125 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 172
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 173 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGML 216
>gi|345782582|ref|XP_540295.3| PREDICTED: splicing factor 3B subunit 4 [Canis lupus familiaris]
Length = 424
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D++ V EEQL LF Q+ R+C D S L +A+V F + + A A+ L
Sbjct: 36 SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMEL 95
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ P + + +P+ R+ ++ N+D + + F
Sbjct: 96 ----LNFTPLNGKPIRIMFSQRDPSI-------RKSGHGNVFIKNLDTSIDNKALHDTF- 143
Query: 198 SVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAAL 233
+ G V ++ L S FV+F E+A A+
Sbjct: 144 AAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAI 180
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D IR++ V++ ++D + + L F G V+ C++ D + + + FV+F
Sbjct: 111 SQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQF 170
Query: 126 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCT 181
+EE A+ A+ L G ++ V V F+ R E E+ S +Y
Sbjct: 171 DNEEAAQNAIKRLNGMLINDKQVYV-----------GLFIRRQEREQTNGSPKFTNVYVK 219
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N+ + T D+K F G + ++ D +R FV F +SA AA+
Sbjct: 220 NLSETYTDEDLKKLF-GPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAV 271
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 10/178 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS-L 137
VYV ++ + T+E L LF G + + D N R F FV F + + A AA+ L
Sbjct: 215 NVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERL 274
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER-----EMCSRTIYCTNIDKKVTQGDI 192
GT + V + A + E ER ++ +Y N+D + +
Sbjct: 275 NGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKL 334
Query: 193 KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
K F S G + +++ D S FV F+ E A ALN +G ++G P+ V+
Sbjct: 335 KDLF-SEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVA 391
>gi|91094515|ref|XP_971941.1| PREDICTED: similar to poly A binding protein [Tribolium castaneum]
gi|270000753|gb|EEZ97200.1| hypothetical protein TcasGA2_TC004389 [Tribolium castaneum]
Length = 565
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 12/178 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS-- 136
VYV + + +T+EQL LF G + C + +P+ + F F+ F + E A A++
Sbjct: 194 NVYVKNFGRNLTQEQLYDLFKNYGTITSCVVMANPDGTSKGFGFIAFEEPESAEKAVTEM 253
Query: 137 ----LAGTMLGFYPVRVLPSKTAIAPVNPTFLP-RSEDEREMCSRTIYCTNIDKKVTQGD 191
L GT L Y R I + + + E + +Y N+D
Sbjct: 254 NNYELNGTNL--YVGRAQKKSERIKELKKCYEQMKLERYNRIQGANVYIKNLDDTFDNDR 311
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
++ F S G + +++ + S FV F+ E A A+ G ++GS PI V+
Sbjct: 312 LRKEF-SQFGAITSAKVMTEGGRSKGFGFVCFSTPEEASKAITEMDGRMIGSKPIYVA 368
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + + FV F
Sbjct: 88 SQRDPSLRKSGIGNVFIKNLDKSIDNKAMYDTFSAFGNILSCKVAIDDDGVSKGYGFVHF 147
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-----IYC 180
E A A+ ML +V K F+PR+E E+E+ ++ +Y
Sbjct: 148 ESIEAANKAIEKVNGML-LNGKKVYVGK---------FIPRAEREKEIGEKSKKYTNVYV 197
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +TQ + F++ G + ++ + +++ IAF E AE A+ +N
Sbjct: 198 KNFGRNLTQEQLYDLFKNY-GTITSCVVMANPDGTSKGFGFIAFEEPESAEKAVTEMN 254
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 136
++YV D+ VTE L F GQ++ R+C D + L +A+V F+ E R +
Sbjct: 13 SLYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQTIEAERVLDT 72
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ +L P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 73 MNFDLLKGKPIRIMWSQ------------RDPSLRKSGIGNVFIKNLDKSI---DNKAMY 117
Query: 197 E--SVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + ++ + D S FV F E+A A+ +L
Sbjct: 118 DTFSAFGNILSCKVAIDDDGVSKGYGFVHFESIEAANKAIEKVNGML 164
>gi|431896603|gb|ELK06015.1| Splicing factor 3B subunit 4 [Pteropus alecto]
Length = 424
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|410968226|ref|XP_004001545.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4 [Felis
catus]
Length = 424
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|329663420|ref|NP_001192513.1| splicing factor 3B subunit 4 [Bos taurus]
gi|395856067|ref|XP_003800464.1| PREDICTED: splicing factor 3B subunit 4 [Otolemur garnettii]
gi|426216470|ref|XP_004002485.1| PREDICTED: splicing factor 3B subunit 4 [Ovis aries]
gi|281346199|gb|EFB21783.1| hypothetical protein PANDA_020653 [Ailuropoda melanoleuca]
gi|296489611|tpg|DAA31724.1| TPA: splicing factor 3b, subunit 4, 49kDa [Bos taurus]
Length = 424
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|348586343|ref|XP_003478928.1| PREDICTED: splicing factor 3B subunit 4-like [Cavia porcellus]
Length = 424
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 73 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 132
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + + + + I+ ++ +V D
Sbjct: 133 AMQTLNGRRVHQSEIR----------VNWAYQSNTTSKEDTSNHFHIFVGDLSNEVND-D 181
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
I L S G V R++ D + +AF + AE A+++++ G LGS IR
Sbjct: 182 ILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD--GEWLGSRAIR 239
>gi|294875884|ref|XP_002767464.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
gi|239869099|gb|EER00182.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
Length = 230
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+ +D +RR+ VYV ++D+ + + L F G ++ C++ P+ R F FV F
Sbjct: 3 SHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHF 62
Query: 126 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
+E A AA++ L G +G V V P K + T P++ +Y +I
Sbjct: 63 ESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGT--PKN-------FTNVYIKHIP 113
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
+ IK F GE+ L + D + R AFV +A E A AA+
Sbjct: 114 ASWNEEKIKEEF-GAFGEITSLAVQTDPK-GRRFAFVNYAEFEQARAAV 160
>gi|355718837|gb|AES06403.1| splicing factor 3b, subunit 4, 49kDa [Mustela putorius furo]
Length = 406
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 12 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 71
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 72 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 114
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 115 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 172
Query: 248 S 248
S
Sbjct: 173 S 173
>gi|194210863|ref|XP_001488649.2| PREDICTED: splicing factor 3B subunit 4-like [Equus caballus]
Length = 450
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|449489905|ref|XP_002191033.2| PREDICTED: splicing factor 3B subunit 4 [Taeniopygia guttata]
Length = 307
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAF 122
+ +++D+ ++YV ++D VTE L +F G V R+C D L +A+
Sbjct: 32 SSEEKGSKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAY 91
Query: 123 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 182
V F ++ AL L + P++ P + + +P R+ + IY N
Sbjct: 92 VNFHNQADGIRALE----ELNYSPIKERPCRIMWSQRDPAL-------RKTGAGNIYIKN 140
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVL 240
+D + + F S G++ ++ D + +S FV + AESA +A+ + +G +L
Sbjct: 141 LDPAIDNKALHDTF-SAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLL 199
Query: 241 GSLPIRVSP 249
+ V P
Sbjct: 200 NDKKVFVGP 208
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 234
T+ N+D K + DI FF V G+V+ ++ + D + S +A+VEF ES I AL
Sbjct: 148 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIKALA 207
Query: 235 CSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
+G +L + PI+V S+ + RA + H
Sbjct: 208 ANGYMLKNRPIKVQSSQAE-KNRAAKASKH 236
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLR-- 119
R+N ++ ++D+ T++V D+ VT+ L F + V ++ D ++
Sbjct: 165 RLNWASAGEKRDDTPDYTIFVGDLAADVTDYMLQETFRVHYPSVKGAKVVTDKMTMRSKG 224
Query: 120 FAFVEFTD-EEGARAALSLAGTMLGFYPVRVLPSK----TAI---APVNPTFLPRSEDER 171
+ FV+F D E ARA + G P+R+ P+ T + P+ T ++ +
Sbjct: 225 YGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGVQERVPIPNTNTQGAQSDN 284
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 231
+ + TI+ +D VT+ +K F + GEV +++ R FV++A SA
Sbjct: 285 DPNNTTIFVGGLDPNVTEDALKQVF-APYGEVVHVKI----PVGKRCGFVQYANRPSAEQ 339
Query: 232 ALN-CSGAVLGSLPIRVSPSKTP 253
AL G ++G +R+S ++P
Sbjct: 340 ALQLLQGTLVGGQNVRLSWGRSP 362
>gi|444515113|gb|ELV10775.1| Splicing factor 3B subunit 4 [Tupaia chinensis]
Length = 355
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|75948207|gb|AAI05267.1| SF3B4 protein [Bos taurus]
Length = 418
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 8 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 67
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 68 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 110
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 111 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 168
Query: 248 S 248
S
Sbjct: 169 S 169
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 132 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 191
Query: 121 AFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + +E A A+ ML Y +P K R EM +
Sbjct: 192 GFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 240
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
IY NI + + + + FE G++ L D + +R FV F ESA A+
Sbjct: 241 FTNIYIKNISTEASDDEFRELFEKY-GDITSSSLARDQEGKSRGFGFVNFTTHESAAKAV 299
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 121
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 122 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 169
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 170 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAHQAIKHVNGML 213
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL-SLA 138
V++ ++D+ + + L F G ++ C++ D N +AFV F +E A A+ +
Sbjct: 1 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMN 60
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCTNIDKKVTQGDIK 193
G +L V V F R E E E+ ++ +Y N ++V G++K
Sbjct: 61 GLLLNDRKVFV-----------GRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLK 109
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
F S G+ ++++ D +R FV + E A A++
Sbjct: 110 ELF-SQFGKTLSVKVMRDSSGKSRGFGFVSYEKHEDANKAVD 150
>gi|403339762|gb|EJY69142.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1016
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
TVYV + Q E++L F G + R+ +PN L+ F +++F ++ + A+ SL
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKS------------KKEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEF 223
GEV+R+ L D + HS F+EF
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEF 870
>gi|403333973|gb|EJY66125.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1017
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
TVYV + Q E++L F G + R+ +PN L+ F +++F ++ + A+ SL
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKS------------KKEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEF 223
GEV+R+ L D + HS F+EF
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEF 870
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 130
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 131 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 188
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 147 AERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVN 196
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 243
++ L S G V R++ D + +AF E + A+ A+++++ G LGS
Sbjct: 197 D-EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD--GEWLGSR 253
Query: 244 PIR 246
IR
Sbjct: 254 AIR 256
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 130
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 131 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 188
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 147 AERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVN 196
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 243
++ L S G V R++ D + +AF E + A+ A+++++ G LGS
Sbjct: 197 D-EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD--GEWLGSR 253
Query: 244 PIR 246
IR
Sbjct: 254 AIR 256
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 136
++YV D+D VT+ QL F G VV R+C D L + +V FT+ ++ ARA
Sbjct: 21 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 80
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L P+RV+ S R R + I+ N+D+ + + F
Sbjct: 81 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 128
Query: 197 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S V + S FV++A ESA A+ +G +L + V P
Sbjct: 129 SSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 182
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +YV ++D +++E+L +F G V ++ DPN + + FV F T EE
Sbjct: 297 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEAT 356
Query: 132 RAALSLAGTMLGFYPVRV 149
A L+G M+ P+ V
Sbjct: 357 EAMSQLSGKMIESKPLYV 374
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR- 109
F +RN G R N +E RTV+V + Q++ L F + G+V D R
Sbjct: 137 FGRRNRSPLGLRS-NSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRL 195
Query: 110 -ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLP 165
+C A++EF D E AL L+G L P+ V + K + P +P
Sbjct: 196 IVCNKTRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMP 255
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 223
++ +Y ++ +T+ ++ FE G++ ++L+ D + S F+ F
Sbjct: 256 KN----MTGPMRLYVGSLHFNITEDMLRSIFEPF-GKIDNIQLIMDPETGRSKGYGFIAF 310
Query: 224 AMAESAIAAL-NCSGAVLGSLPIRVS 248
E A AL +G L P++V
Sbjct: 311 RNCEDAKKALEQLNGFELAGRPMKVG 336
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 130
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 131 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 188
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 147 AERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVN 196
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 243
++ L S G V R++ D + +AF E + A+ A+++++ G LGS
Sbjct: 197 D-EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD--GEWLGSR 253
Query: 244 PIR 246
IR
Sbjct: 254 AIR 256
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 135
++V D+ ++ + L F G++ DCR+ DP ++ + FV F + A +A+
Sbjct: 61 HHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAESAI 120
Query: 136 -SLAGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
++ G LG + R P+ + P ++ + T+YC + +T
Sbjct: 121 AAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGGLTSGLT 180
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 247
++ F + G +Q +R+ D + AFV FA ESA A+ + + P++
Sbjct: 181 DELVQKTF-APFGNIQEIRVFKDKGY----AFVRFATKESATHAIVAVHNSDINGQPVKC 235
Query: 248 SPSKTPVRP 256
S K P
Sbjct: 236 SWGKESGEP 244
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 136
++YV D+D VT+ QL F QVV R+C D N+ L + +V +++ + A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 107 LNYSYLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAF 154
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S CG + ++ D+ +R FV+F +SA A+ +G VL I V P
Sbjct: 155 -SGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGP 208
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFT-DEEGARAALSL 137
+YV ++D VT+E+L LF G + C++ DP+ + + FV F+ E +R +
Sbjct: 329 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 388
Query: 138 AGTMLGFYPVRV 149
G M+G P+ V
Sbjct: 389 NGKMVGGKPLYV 400
>gi|29436780|gb|AAH49453.1| Cugbp1 protein [Danio rerio]
Length = 534
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 18/196 (9%)
Query: 60 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD----PN 115
G ++MN + Q ++ ++V I + +E+QL LF G V + + D P
Sbjct: 35 GSKKMNGSLDHPDQPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPP 94
Query: 116 SVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 175
FV + + A A + + +++LP + P SE +
Sbjct: 95 QSKGCCFVTYYTRKSALEAQN------ALHNMKILPGMHHPIQMKPA---DSEKNNAVED 145
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 232
R ++ I KK + DI+L F S G+++ R+L +R AFV F MA+SAI +
Sbjct: 146 RKLFVGMISKKCNENDIRLMF-SPYGQIEECRILRGPDGLSRCAFVTFTARQMAQSAIKS 204
Query: 233 LNCSGAVLG-SLPIRV 247
++ S + G S PI V
Sbjct: 205 MHQSQTMEGCSSPIVV 220
>gi|83774819|dbj|BAE64942.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1037
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ + E + LF G+++D R N+ RF +V+F E A +A L
Sbjct: 654 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 713
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKLF 195
GT +G T A ++ P + +R R I+ +N+D K ++ D++
Sbjct: 714 GTTVG-------KGLTLTAKISD---PSRKQDRHGPIYEGREIHVSNVDFKASERDVQEL 763
Query: 196 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS--LPIRVSPSKT 252
F S G V+ +RL ++ +V F+ E A AAL G S L +++S ++
Sbjct: 764 F-SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDGQEYRSRTLHVKISAPQS 822
Query: 253 PVR 255
R
Sbjct: 823 TKR 825
>gi|324497903|gb|ADY39600.1| putative TIA1 protein [Hottentotta judaicus]
Length = 196
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 139
T+YV ++D VTEE + LF G V+ C+I +P + + FVEFTD + A AAL
Sbjct: 1 TLYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPGND-PYCFVEFTDHQAAAAALLAMN 59
Query: 140 TM--LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
LG + + A +P N P+ + + I+ ++ ++ +K F
Sbjct: 60 KRQCLG----KEMKVNWATSPGN---TPKQDTSKHY---HIFVGDLSPEIETQQLKEAFA 109
Query: 198 SVCGEVQRLRLLGDYQ--HSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVS 248
GE+ R++ D Q S FV F AE+AIA +N G LGS IR +
Sbjct: 110 PF-GEISDCRVVRDPQTLKSKGYGFVSFVKKTDAENAIATMN--GQWLGSRAIRTN 162
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 129
+QD ++V D+ ++ +QL F G++ DCR+ DP ++ + FV F +
Sbjct: 81 KQDTSKHYHIFVGDLSPEIETQQLKEAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKT 140
Query: 130 GARAAL-SLAGTMLGFYPVRV 149
A A+ ++ G LG +R
Sbjct: 141 DAENAIATMNGQWLGSRAIRT 161
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 136
++YV D+D VT+ QL F QVV R+C D N+ L + +V +++ + A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 107 LNYSYLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAF 154
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S CG + ++ D+ +R FV+F +SA A+ +G VL I V P
Sbjct: 155 -SGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGP 208
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFT-DEEGARAALSL 137
+YV ++D VT+E+L LF G + C++ DP+ + + FV F+ E +R +
Sbjct: 329 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 388
Query: 138 AGTMLGFYPVRV 149
G M+G P+ V
Sbjct: 389 NGKMVGGKPLYV 400
>gi|398404546|ref|XP_003853739.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
gi|339473622|gb|EGP88715.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
Length = 763
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D ++R+T V++ ++D + + L F G ++ C++ D N+ + +
Sbjct: 124 CRIMWSQRDPLLRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDENANSKGY 183
Query: 121 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + E A A+ ++ G +L V V +P K ++ V +E +
Sbjct: 184 GFVHYETAEAANQAIKNVNGMLLNEKKVFVGHHIPKKDRMSKV---------EEMKANFT 234
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAAL 233
IY NID + T + + FE G++ L D + FV + E A A+
Sbjct: 235 NIYVKNIDSETTDNEFRELFEKY-GDITSASLAHDNESGKNRGFGFVNYIRHEDAYKAV 292
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFT-DEEGARAALSL 137
+YV ++D VTE L LF + GQV R+C D L +A+V + +G RA L
Sbjct: 55 LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNVAGDGERALEEL 114
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 115 NYTLIKGRPCRIMWSQR-----DPLL-------RKTGQGNVFIKNLDAAIDNKALHDTF- 161
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+ G + ++ D +++ FV + AE+A A+ N +G +L + V
Sbjct: 162 AAFGNILSCKVAQDENANSKGYGFVHYETAEAANQAIKNVNGMLLNEKKVFVG 214
>gi|317156878|ref|XP_001826075.2| pre-mRNA splicing factor (Prp24) [Aspergillus oryzae RIB40]
Length = 1289
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ + E + LF G+++D R N+ RF +V+F E A +A L
Sbjct: 906 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 965
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE--MCSRTIYCTNIDKKVTQGDIKLFF 196
GT +G + L I+ +P+ R +D R I+ +N+D K ++ D++ F
Sbjct: 966 GTTVG----KGLTLTAKIS--DPS---RKQDRHGPIYEGREIHVSNVDFKASERDVQELF 1016
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS--LPIRVSPSKTP 253
S G V+ +RL ++ +V F+ E A AAL G S L +++S ++
Sbjct: 1017 -SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDGQEYRSRTLHVKISAPQST 1075
Query: 254 VR 255
R
Sbjct: 1076 KR 1077
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALS- 136
++YV D++ VTE QL F + G VV R+C D L +A+V F A A+
Sbjct: 33 SLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAIDV 92
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L ++ P+RVL S+ R R I+ N+DK + D K
Sbjct: 93 LNFQVINGKPIRVLYSQ------------RDPAVRRSGVGNIFIKNLDKAI---DNKALL 137
Query: 197 ESVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
++ G + ++ D +++ FV+F AE+A AA+ N +G L + V P
Sbjct: 138 DTFAQFGTITSAKVAMDSAGNSKGYGFVQFETAEAAQAAIDNVNGMELNDKQVYVGP 194
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
+Y+ ++++ +E+L LF G + CR+ D + R AFV F+ +E RA +
Sbjct: 314 NLYIKNLEEGTDDEKLRELFNEFGTITSCRVMRDASGASRGSAFVAFSSPDEATRAVTEM 373
Query: 138 AGTMLGFYPVRV 149
G M+G P+ V
Sbjct: 374 NGKMVGAKPLYV 385
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAA 134
+ ++YV D+D VTE L +F + V RIC D L +A+V + A A
Sbjct: 10 VSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
L L F +R P + +P R ++ N+DK + D K
Sbjct: 70 LD----TLNFTCIRGRPCRIMWCLRDPA-------SRRNNDGNVFVKNLDKSI---DNKT 115
Query: 195 FFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
F+ S+ G + ++ D + S F+ F A+SA A++ +GAVLG PI V
Sbjct: 116 LFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVG 173
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAA 146
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 147 ERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVND 196
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
++ L S G V R++ D + +AF E + A+ A+++++ G LGS
Sbjct: 197 -EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD--GEWLGSRA 253
Query: 245 IR 246
IR
Sbjct: 254 IR 255
>gi|303286577|ref|XP_003062578.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456095|gb|EEH53397.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 235
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 69 SNAQQDEVIRRTVYVSDI----DQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 124
S A E I RTV+V I + ++TE +A F G VV R+ R A+VE
Sbjct: 2 SRASDQEKISRTVHVGGIRGLDNGEITERDVAEFFSQQGPVVAVRVH------ARSAWVE 55
Query: 125 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 156
F D+ AAL+L G G + +RV SKTAI
Sbjct: 56 FADDASTMAALNLDGVTTGGHNLRVNRSKTAI 87
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 164 LPRSEDEREMCSRTIYCTNI----DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 219
+ R+ D+ E SRT++ I + ++T+ D+ FF S G V +R+ R A
Sbjct: 1 MSRASDQ-EKISRTVHVGGIRGLDNGEITERDVAEFF-SQQGPVVAVRV------HARSA 52
Query: 220 FVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA 258
+VEFA S +AALN G G +RV+ SKT + A
Sbjct: 53 WVEFADDASTMAALNLDGVTTGGHNLRVNRSKTAINTNA 91
>gi|238492991|ref|XP_002377732.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
gi|220696226|gb|EED52568.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
Length = 1290
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ + E + LF G+++D R N+ RF +V+F E A +A L
Sbjct: 907 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 966
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE--MCSRTIYCTNIDKKVTQGDIKLFF 196
GT +G + L I+ +P+ R +D R I+ +N+D K ++ D++ F
Sbjct: 967 GTTVG----KGLTLTAKIS--DPS---RKQDRHGPIYEGREIHVSNVDFKASERDVQELF 1017
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS--LPIRVSPSKTP 253
S G V+ +RL ++ +V F+ E A AAL G S L +++S ++
Sbjct: 1018 -SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDGQEYRSRTLHVKISAPQST 1076
Query: 254 VR 255
R
Sbjct: 1077 KR 1078
>gi|67623121|ref|XP_667843.1| poly(a)-binding protein fabm [Cryptosporidium hominis TU502]
gi|54659004|gb|EAL37605.1| poly(a)-binding protein fabm [Cryptosporidium hominis]
Length = 746
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAA 134
+ ++YV D+D VTE L +F + V RIC D L +A+V + A A
Sbjct: 10 VSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
L L F +R P + +P R ++ N+DK + D K
Sbjct: 70 LD----TLNFTCIRGRPCRIMWCLRDPA-------SRRNNDGNVFVKNLDKSI---DNKT 115
Query: 195 FFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
F+ S+ G + ++ D + S F+ F A+SA A++ +GAVLG PI V
Sbjct: 116 LFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVG 173
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 132
E +R V+ I + E + F G+V D R+ D NS ++EF D
Sbjct: 222 ERDQRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 281
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPT----------FLPRSEDEREMCSRTIYCTN 182
A++L+G L PV V PS+ V T P S +R +Y N
Sbjct: 282 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYS-----GGARKLYVGN 336
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAV-L 240
+ +T+ DI+ FE+ G+V+ ++L L + H FV+FA E A A + +G + +
Sbjct: 337 LHISITEADIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEI 395
Query: 241 GSLPIRVS 248
G I+VS
Sbjct: 396 GGRTIKVS 403
>gi|391865004|gb|EIT74296.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 1290
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ + E + LF G+++D R N+ RF +V+F E A +A L
Sbjct: 907 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 966
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE--MCSRTIYCTNIDKKVTQGDIKLFF 196
GT +G + L I+ +P+ R +D R I+ +N+D K ++ D++ F
Sbjct: 967 GTTVG----KGLTLTAKIS--DPS---RKQDRHGPIYEGREIHVSNVDFKASERDVQELF 1017
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS--LPIRVSPSKTP 253
S G V+ +RL ++ +V F+ E A AAL G S L +++S ++
Sbjct: 1018 -SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDGQEYRSRTLHVKISAPQST 1076
Query: 254 VR 255
R
Sbjct: 1077 KR 1078
>gi|431894424|gb|ELK04224.1| Polyadenylate-binding protein 1-like protein [Pteropus alecto]
Length = 512
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
E A+ A+S ML + K + F R E E E+ +R + TNI K
Sbjct: 147 THEAAQLAISTMNGML------LNDRKVFVG----HFKSRQEREAELGARAMEFTNIYVK 196
Query: 187 VTQGDI------KLFFE---SVCGEVQRLRLL-GDYQHSTRIAFVEFAMAESAIAAL 233
Q D+ +LF + S G++ ++++ D HS FV F E A A+
Sbjct: 197 NLQVDMDEWGLQELFSQFDWSSPGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAV 253
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A++ +L
Sbjct: 117 DTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEAAQLAISTMNGML 162
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 136
++YV D+D VT+ QL F G VV R+C D L + +V FT+ ++ ARA
Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L P+RV+ S R R + I+ N+D+ + + F
Sbjct: 97 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144
Query: 197 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S V + S FV++A ESA A+ +G +L + V P
Sbjct: 145 SSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 198
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 131
D+ +YV ++D +++E+L +F G V ++ DPN + + FV F T EE
Sbjct: 313 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEAT 372
Query: 132 RAALSLAGTMLGFYPVRV 149
A L+G M+ P+ V
Sbjct: 373 EAMSQLSGKMIESKPLYV 390
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 136
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 267 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 326
Query: 137 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L+G L P+ V + K + P F P+S + +Y ++ +T+ ++
Sbjct: 327 LSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKS----HVGPMRLYVGSLHFDITEEMLR 382
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
FE G++ ++L+ D + S F+ + AE A AL +G L P++V
Sbjct: 383 GIFEPF-GKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQLNGFELAGRPMKVG 439
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESA 229
E +RT++C + ++V D++ FF SV G+V+ +RL+ + IA++EF ES
Sbjct: 263 ERDARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGIAYIEFEDPESV 321
Query: 230 IAALNCSGAVLGSLPIRV 247
AL SG L +PI V
Sbjct: 322 ALALGLSGQRLLGVPIMV 339
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 127
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 171 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 227
Query: 128 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
EE AA+ L G L P+ ++ ++ NP + + ++ +Y NI
Sbjct: 228 EESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEAT--TSNPNQIPFHRLYVGNIHF 285
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 243
+T+ D++ FE GE++ ++L + Q +R FV+F A AL +G L
Sbjct: 286 SITEADLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 344
Query: 244 PIRVS 248
PIRV
Sbjct: 345 PIRVG 349
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 31/168 (18%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
T+YV +D++VT+ L LF+ G VV + D +S F F+EF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P++V + S E+ M ++ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANVFVGNLDPEV---DEKL 115
Query: 195 FFESVCG-----EVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALN 234
F++ +V ++ + +S AFV FA ++SAI A+N
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMN 163
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL--RFAFVEFTDEEGARAALSL 137
TV+V ++ +V +E+L T F CG V R+ D + + F FV F + +GA AL +
Sbjct: 338 TVFVGNLPHEVQDEELWTFFADCGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALALEM 397
Query: 138 AGTMLGFYPVRVLP-SKTAIA 157
AG L PVRV SK A A
Sbjct: 398 AGRELCGRPVRVTEFSKQAAA 418
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 180
A+V + + E + AL+L GT++ +RV + P SE S T++
Sbjct: 295 AYVVYREREAVKKALALNGTVVLGKHIRV----DVVGDTKPQA---SE------SHTVFV 341
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH--STRIAFVEFAMAESAIAALNCSGA 238
N+ +V ++ FF + CG+V +RL+ D FV F + A AL +G
Sbjct: 342 GNLPHEVQDEELWTFF-ADCGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALALEMAGR 400
Query: 239 VLGSLPIRVS 248
L P+RV+
Sbjct: 401 ELCGRPVRVT 410
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
E A+ A+S ML + K + F R E E E+ +R IY
Sbjct: 147 THEAAQQAISTMNGML------LNDRKVFVG----HFKSRREREAELGARATAFTNIYVK 196
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLL-GDYQHSTRIAFVEFAMAESAIAAL 233
N+ V + ++ F S G++ ++++ D HS FV F E A A+
Sbjct: 197 NLPGHVDERGLQDLF-SQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAV 248
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ ++ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNVFIKNLEDSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A++ +L
Sbjct: 117 DTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEAAQQAISTMNGML 162
>gi|167533335|ref|XP_001748347.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773159|gb|EDQ86802.1| predicted protein [Monosiga brevicollis MX1]
Length = 406
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D +V EE + LFL G VV + D + + FVEF E+ A AL +
Sbjct: 14 TVYVGGLDDKVDEELVWELFLQAGPVVSVHMPKDRVSGAHQSYGFVEFLGEDDAEYALKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K+A S + +Y N+ +V D KL
Sbjct: 74 L-NMINVYGKPIRV--NKSA-----------SHSKHMEVGANLYIGNLAPEV---DEKLL 116
Query: 196 FE--SVCGEV-QRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC 235
F+ S G + Q +++ D + HS AF+ +A E++ AA+
Sbjct: 117 FDTFSAFGVILQHPKVMRDLETGHSKGFAFINYATFEASDAAIKA 161
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 60 GKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICG 112
G R RT Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 184 GGRGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSG 243
Query: 113 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDE 170
V +VEF DEE A+ L G L P+ ++ ++ NP S ++
Sbjct: 244 RSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQ 299
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 229
+ +Y NI +T+ D++ FE GE+ ++L + +R FV+F A
Sbjct: 300 NSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQA 358
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L PIRV
Sbjct: 359 REALEKMNGFDLAGRPIRVG 378
>gi|427776813|gb|JAA53858.1| Putative rna-binding protein sart3 rrm superfamily [Rhipicephalus
pulchellus]
Length = 936
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
RTV++S++ V E Q+ F G++ + R+ D + F ++ FT + AAL
Sbjct: 666 RTVFLSNLAYDVEESQIEEAFKEVGEIEELRLVRDYKGRSKGFGYLVFTHMQSVEAAL-- 723
Query: 138 AGTMLGFYPVRVLPSKTAIAPVN--PTFLPRSEDEREMCSRT------IYCTNIDKKVTQ 189
K PVN P F+ + + + RT ++ I VT+
Sbjct: 724 ---------------KRDRTPVNGRPVFVSKCNERNQFRFRTGMEKNKLFVKGIPFSVTE 768
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIR 246
+++ F GE++ +RL+ Y+ HS IA+VE+A SA AL G +G ++
Sbjct: 769 KELEELFGKY-GELKGVRLV-TYRNGHSKGIAYVEYANETSATVALVQTDGMAMGDHTLQ 826
Query: 247 VSPSKTPVR 255
V+ S P R
Sbjct: 827 VAISNPPAR 835
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 38/275 (13%)
Query: 14 GYVCPLLLILSCFKLLVWLLVWYFLSLIKVLCLFNTAFQKRNG----YSQGKRRMNC--- 66
G+ +L I+ FK+ W+ +W + L + NG ++ R+N
Sbjct: 123 GFSIEVLYIVKSFKIYEWIWLWA-GDVFHELGILENFXHSYNGTLMPNTEQPFRLNWATF 181
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNS--VLRFAFV 123
T + + D +++V D+ VT+ L F T V ++ D N+ + FV
Sbjct: 182 STGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFV 241
Query: 124 EFTDE-EGARAALSLAGTMLGFYPVRV---LPSKTA---------------IAPVNPTFL 164
F DE E +RA + G P+R+ P K + N
Sbjct: 242 RFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVA 301
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEF 223
S+ + + TI+ +D +VT D++ F S GEV +++ +G FV+F
Sbjct: 302 QGSQANGDSTNTTIFVGGLDSEVTDEDLRQSF-SQFGEVVSVKIPVG-----KGCGFVQF 355
Query: 224 AMAESAIAALN-CSGAVLGSLPIRVSPSKTPVRPR 257
A SA AL +G V+G +R+S + P +
Sbjct: 356 ANRNSAEDALQRLNGTVIGKQTVRLSWGRNPASKQ 390
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 42/227 (18%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 129
++D V+V D+ +V +E LA F G + D R+ D NS + F+ F D+
Sbjct: 95 KEDTTGHYHVFVGDLSPEVNDEVLAKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKT 154
Query: 130 GARAAL-SLAGTMLGFYPVRV------------------------LPSKTAIAPVNPTFL 164
A A+ ++ G LG +RV + + +A AP+N
Sbjct: 155 DAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPTTTASSPRPGGAVTTGSAPAPINFQGG 214
Query: 165 PRSED----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF 220
P S + + + T+Y N+ TQ D+ F+S+ G + +R+ D AF
Sbjct: 215 PLSYESVVQQTPAYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAF 269
Query: 221 VEFAMAE-SAIAALNCSGAVLGSLPIRVSPSK-----TPVRPRAPRP 261
V+ E +A+A + G ++ PI+ S K +P P P
Sbjct: 270 VKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGGTAQPGGPSP 316
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 22/180 (12%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 134
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 10 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 69
Query: 135 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L +L G + +R VN + + E ++ ++ +V +
Sbjct: 70 LQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLA 119
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
F S G + R++ D +AF + AE AIA +N G LGS IRV+
Sbjct: 120 KAF-SAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRVN 176
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 83 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV---LRFAFVEFTDEEGARAALSLAG 139
V+ + Q +TE ++ ++F G + CR+ D F FV + +EE A+ A+
Sbjct: 108 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 165
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
L YP+R K + A P+S+D +E +Y TN+ + +T+ + + F
Sbjct: 166 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 214
Query: 200 CGEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
VQ+ L R +AFV F A+ AI+ALN G+ P+ V ++ R
Sbjct: 215 GTIVQKNILRDKLTGQPRGVAFVRFNKREEAQEAISALNNVIPQGGNQPLIVRVAEDHGR 274
Query: 256 PRA 258
+A
Sbjct: 275 AKA 277
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI---- 110
NGY +R+ + Q D++ +Y++++ + +TEEQL +F G +V I
Sbjct: 167 NGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDK 226
Query: 111 -CGDPNSVLRFAFVEFTDEEGARAALS 136
G P V AFV F E A+ A+S
Sbjct: 227 LTGQPRGV---AFVRFNKREEAQEAIS 250
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ ++D+ + + L F G ++ C++ D N + FV F
Sbjct: 87 SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFE 146
Query: 127 DEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
+E A RA + G +L V V F R E E E+ +R +Y
Sbjct: 147 TQEAAERAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAKEFTNVYI 195
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
N + + +K F S G +R++ D +R FV F E A A++
Sbjct: 196 KNFGEDMDDDKLKDIF-SKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQRAVD 249
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ Q VTE L F G ++ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A+ +L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGML 162
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G V+ +I D N + FVEF D A
Sbjct: 86 EPNKRALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAA 145
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 146 ERAMQTLNGRRIHQSEIR----------VNWAYQSNTANKEDTSNHFHIFVGDLSNEVND 195
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
++ L S G V R++ D + +AF E A AE A+ +++ G LGS
Sbjct: 196 -EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMD--GEWLGSRA 252
Query: 245 IR 246
IR
Sbjct: 253 IR 254
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 133
E +R +Y+ +D +VTE+ L +F T G V +I D NS L + FVE+ D A
Sbjct: 88 EPNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGDI 192
A+S T+ G RV S+ VN + + ++ + + I+ ++ +V ++
Sbjct: 148 AMS---TLNG---RRVHQSEIR---VNWAYQSNNNNKEDTSNHFHIFVGDLSNEVND-EV 197
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
L S G V R++ D + +AF E AE A+++++ G LGS IR
Sbjct: 198 LLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMD--GEWLGSRAIR 254
>gi|224083926|ref|XP_002307174.1| predicted protein [Populus trichocarpa]
gi|222856623|gb|EEE94170.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+T++V ++ QV + F G+V D R D + + F VEFT E A AL+
Sbjct: 391 KTLFVGNLSFQVERADVENFFKEAGEVADVRFALDADQRFKGFGHVEFTTTEAALKALNF 450
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC------SRTIYCTNIDKKVTQGD 191
G L VR+ ++ + T P S+D S+TI+ DK + +
Sbjct: 451 NGKSLLGRDVRLDLARERGERTSNT--PYSKDSNSFQKGGRGQSQTIFVKGFDKFGAEDE 508
Query: 192 IKLFFE---SVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAALNCSGAVLG 241
I+ + CGE+ R+ + DY+ +A++EF A++ A +G+ LG
Sbjct: 509 IRSSLQEHFGSCGEISRISIPTDYETGAIKGMAYLEFNDADAMNKAFELNGSQLG 563
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 153 KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY 212
KT PV P SE+ S+T++ N+ +V + D++ FF+ GEV +R D
Sbjct: 374 KTPKTPVTPVT---SEN---AGSKTLFVGNLSFQVERADVENFFKE-AGEVADVRFALDA 426
Query: 213 -QHSTRIAFVEFAMAESAIAALNCSGAVL 240
Q VEF E+A+ ALN +G L
Sbjct: 427 DQRFKGFGHVEFTTTEAALKALNFNGKSL 455
>gi|125808454|ref|XP_001360757.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
gi|54635929|gb|EAL25332.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
Length = 640
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 125
+Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + + FV F
Sbjct: 78 SQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVAIDEKGNSKGYGFVHF 137
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
EE A ++ ML +V K F+PR E E+E+ + +Y
Sbjct: 138 ETEEAANMSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFTNVYV 187
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALN 234
N + +K FFE G++ +++ ++ +A+ AE+A+ ALN
Sbjct: 188 KNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQALN 244
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ Q + E L F T G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F +R P + + +P+ R ++ N+DK + I F
Sbjct: 62 ---TMNFDLIRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKGIDNKAIYDTF- 110
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
S G + ++ D + +++ FV F E+A +++ +G +L + V
Sbjct: 111 SAFGNILSCKVAIDEKGNSKGYGFVHFETEEAANMSIDRVNGMLLNGKKVYVG 163
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 131 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 190
Query: 121 AFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + +E A A+ ML Y +P K R EM +
Sbjct: 191 GFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 239
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
IY NI + + + + FE G++ L D + +R FV F ESA A+
Sbjct: 240 FTNIYVKNISTEASDDEFRELFEKY-GDITSSSLARDQEGKSRGFGFVNFTTHESAAKAV 298
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 61 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 120
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 121 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDVAIDNKALHDTF 168
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 169 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAHQAIKHVNGML 212
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 28/166 (16%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++VTE L LFL G VV+ + D S + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVTEALLWELFLQAGPVVNTHMPKDRVTQSHQGYGFVEFMGEEDADYAIKV 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y PVRV + S ++ + I+ N+D ++ D KL
Sbjct: 74 L-NMIKLYGKPVRVNKA--------------SAHQKNLDVGANIFIGNLDPEI---DEKL 115
Query: 195 FFE--SVCGEV-QRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC 235
++ S G + Q +++ D + +S AF+ FA E+A AA+
Sbjct: 116 LYDTFSAFGVILQTPKIMRDVESGNSKGYAFINFASFEAADAAIEA 161
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVE 124
+ S A++D V+V D+ +V + LA F G + D R+ D NS + F+
Sbjct: 92 QGSTAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 151
Query: 125 FTDEEGARAAL-SLAGTMLGFYPVRV-----------LPSKT----AIAPVNPTFLPRSE 168
F D+ A A+ ++ G LG +RV P T A AP+N P S
Sbjct: 152 FRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAPRPTGAGGAPAPINFQGGPLSY 211
Query: 169 D----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 224
+ + + T+Y N+ TQ D+ F+S+ G + +R+ D AFV+
Sbjct: 212 ETVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLD 266
Query: 225 MAE-SAIAALNCSGAVLGSLPIRVSPSK 251
E +A+A + G ++ PI+ S K
Sbjct: 267 THENAAMAIVQLQGQMVHGRPIKCSWGK 294
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 25/195 (12%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 134
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 12 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 71
Query: 135 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L +L G + +R VN + + E ++ ++ +V +
Sbjct: 72 LQTLNGRKIFDTEIR----------VNWAYQGSTAKEDTSGHFHVFVGDLSPEVNDAVLA 121
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRV- 247
F S G + R++ D +AF + AE AIA +N G LGS IRV
Sbjct: 122 KAF-SAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRVN 178
Query: 248 -SPSKTPVRPRAPRP 261
+ KT P APRP
Sbjct: 179 WANQKTQGAP-APRP 192
>gi|357168503|ref|XP_003581679.1| PREDICTED: uncharacterized protein LOC100838448 [Brachypodium
distachyon]
Length = 741
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 20/205 (9%)
Query: 58 SQGKRRMNCRTSNAQQDEVI--RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DP 114
S+ K N + + A E +T++V ++ V EQ+ F +VVD R +
Sbjct: 450 SKKKSAQNDQKTPASSSEATTGSKTLFVGNLSYSVGIEQVKEFFQEVAEVVDVRFATFED 509
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER--- 171
S FA VEF E A L G L PVR+ +A + P S +
Sbjct: 510 GSSKGFAHVEFATTEAVHKARELNGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSF 564
Query: 172 ----EMCSRTIYCTNIDKKVTQGDIKLFFE---SVCGEVQRLRLLGDYQ--HSTRIAFVE 222
+ S T + D + + I+ + CGE+ R+ + DY+ S IA++E
Sbjct: 565 KKPGQSSSNTAFIRGFDASLGEDQIRSSLQKHFGSCGEITRVSIPKDYETGASKGIAYME 624
Query: 223 FAMAESAIAALNCSGAVLGSLPIRV 247
F+ S A SG+ LG + V
Sbjct: 625 FSDQSSLSKAFELSGSDLGGFSLYV 649
>gi|432114293|gb|ELK36221.1| Splicing factor 3B subunit 4 [Myotis davidii]
Length = 379
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|386766659|ref|NP_001163756.2| CG34354, isoform E [Drosophila melanogaster]
gi|386766661|ref|NP_001163755.2| CG34354, isoform D [Drosophila melanogaster]
gi|383292995|gb|ACZ95050.2| CG34354, isoform E [Drosophila melanogaster]
gi|383292996|gb|ACZ95049.2| CG34354, isoform D [Drosophila melanogaster]
Length = 431
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
++V D+ ++ +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 138 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 188
G LG + R P+ A P ++ + T+YC I+ ++
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
+I S G +Q +R+ D + AFV F+ E+A A+
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKDKGY----AFVRFSTKEAATHAI 258
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 31/168 (18%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
T+YV +D++VT+ L LF+ G VV + D +S F F+EF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P++V + S E+ M ++ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANVFVGNLDPEV---DEKL 115
Query: 195 FFESVCG-----EVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALN 234
F++ +V ++ + +S AFV FA ++SAI A+N
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMN 163
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 127
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 171 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 227
Query: 128 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
EE AA+ L G L P+ ++ ++ NP + + ++ +Y NI
Sbjct: 228 EESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEAT--TSNPNQIPFHRLYVGNIHF 285
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 243
+T+ D++ FE GE++ ++L + Q +R FV+F A AL +G L
Sbjct: 286 SITESDLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 344
Query: 244 PIRVS 248
PIRV
Sbjct: 345 PIRVG 349
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 132
+ + ++YV D++ V + QL LF G VV R+C D ++ L + +V +++ + A
Sbjct: 26 QFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 85
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL + L F P+ P + + +P+ R+ + I+ N+DK + +
Sbjct: 86 RALDV----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKGIDHKAL 134
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 249
F S G + ++ D ++ FV+F E+A A++ +G +L + V P
Sbjct: 135 HDTF-SAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGP 192
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGA 131
D+ +Y+ ++D + +++L LF G + C++ DPN + R + FV F+ EE +
Sbjct: 307 DKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEAS 366
Query: 132 RAALSLAGTMLGFYPVRV 149
RA + M+ P+ V
Sbjct: 367 RALAEMNSKMVVSKPLYV 384
>gi|157817831|ref|NP_001099621.1| poly(A) binding protein, cytoplasmic 2 [Rattus norvegicus]
gi|149017412|gb|EDL76463.1| poly A binding protein, cytoplasmic 2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +RR+ V++ ++++ + + L F G ++ C++ D N FV F
Sbjct: 87 SQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVCDENGSKGHGFVHFE 146
Query: 127 DEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI-- 183
EE A RA + G +L V V F R E E E+ +RT TN+
Sbjct: 147 TEEAAERAIEKMNGMLLNDRKVFV-----------GQFKSRKEREAELGTRTKEFTNVYI 195
Query: 184 -------DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN- 234
D K G F G+V ++++ D ++ FV F E A A++
Sbjct: 196 KNFGDRMDDKTLNGLFGRF-----GQVLSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDE 250
Query: 235 CSGAVLGSLPIRVSPSKTPV 254
+G L I V P++ V
Sbjct: 251 MNGKELNGKHIYVGPAQKKV 270
>gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens]
Length = 424
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-DMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 59 QGKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN 115
G+R + + A+ + E +RTV+ I + TE + F G+V D R+ D N
Sbjct: 155 DGRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRN 214
Query: 116 S--VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
S +VEF D A++L+G +L PV V PS+ V T
Sbjct: 215 SRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMG 274
Query: 174 ----CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAES 228
+R +Y N+ +T+ +++ F G V+ +++ + + H F++F E
Sbjct: 275 PYSGGARRLYVGNLHPNITEDNLRQVF-GAFGTVELVQMPVDESGHCKGFGFIQFTRLED 333
Query: 229 AIAALNCSGAV-LGSLPIRVS 248
A AL+ +G + + I+VS
Sbjct: 334 ARNALSLNGQLEIAGRTIKVS 354
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 160 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTR 217
+ T P ++ ER+ RT++ I K T+ D+ FF S G+V+ +RL+ D + S
Sbjct: 164 DETAEPEADPERDQ--RTVFAYQISLKATERDVYEFF-SRAGKVRDVRLIMDRNSRRSKG 220
Query: 218 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
+ +VEF A S A+ SG +L S P+ V PS+
Sbjct: 221 VGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSE 254
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 136
++YV D++ TE QL LF T G VV R+C D L +A+V F+ ++ ARA
Sbjct: 44 SLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAIDV 103
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L ++ P+R+L S+ +PT R+ I+ N+DK + ++ F
Sbjct: 104 LNFQVVNGKPIRILYSQR-----DPTI-------RKSGVGNIFIKNLDKDIDTVALRDTF 151
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALNCSGAVLGSLPIRVSP 249
+ G + ++ D Q +++ F++F A A+ AI +N G L + V P
Sbjct: 152 -AQFGNIVSAKVATDGQGNSKGYGFIQFDTEAAAKEAIEKVN--GMELNDKVVYVGP 205
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSL 137
+Y+ +++ +E L LF G + CR+ D + V R AFV F+ EE RA L
Sbjct: 325 NLYIKNLEDGADDETLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTEL 384
Query: 138 AGTMLGFYPVRV 149
G M+G P+ V
Sbjct: 385 NGKMVGAKPLYV 396
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSL 137
V+V ++ +VT+E+L +F G V I D + + F FV + T E+ ++A L
Sbjct: 221 NVFVKNLGDEVTDEELRKVFEGFGPVTSVMISKDEDGKSKGFGFVCYETPEDASKAVEEL 280
Query: 138 AGTM----LGFYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
G + R A + F R E +M +Y N++ +
Sbjct: 281 DGKHGEEDKKWVVCRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKNLEDGADDETL 340
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+ F+ G + R++ D +R AFV F+ E A A+ +G ++G+ P+ V+
Sbjct: 341 RELFKEF-GTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTELNGKMVGAKPLYVA 397
>gi|330812809|ref|XP_003291310.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
gi|325078525|gb|EGC32172.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
Length = 587
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA-LSL 137
+ V+ ++ +E+++ LF G + +I + AF+ F D A AA +L
Sbjct: 117 KIVWAGNVHPDSSEDEIRGLFSQFGYIQAIKII----PAKQCAFITFGDVNAAIAAQYNL 172
Query: 138 AGTMLGFYPVRVLPSKTAIAPV-------NPTF-LPRSEDEREMCSRTIYCTNIDKKVTQ 189
GT + YP+++ K AP P F P + E+ ++ ++ NI VT
Sbjct: 173 NGTPIRGYPLKLGFGKVENAPAAFQQQQQQPHFNKPPHHLQEEVPTKNLWLGNIGPSVTS 232
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+K F+ G V +R+L AFV F ESAIAA N +G ++ +P++++
Sbjct: 233 ETLKQLFDQF-GNVDNIRILV----GRGCAFVNFFTVESAIAARNNLTGTMVCGMPLKIN 287
>gi|242096254|ref|XP_002438617.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
gi|241916840|gb|EER89984.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
Length = 631
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARA 133
EV VY+ ++ + +++ L F G++ + D N V + F FV F E A
Sbjct: 207 EVKFTNVYIKNLPTEFSDDDLRQEFAPFGEITSAVVMRDVNGVSKCFGFVNFEKPEFALE 266
Query: 134 ALSLA-GTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR----TIYCTNIDK 185
A+ A G ++ Y R A + F + ED + + +Y NID
Sbjct: 267 AVKKANGKVINDKTLYVGRAQKKAERQAELKTKF--KQEDRDKKVDKPNGINLYLKNIDD 324
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSL 243
+ +K+ FE G+V +++ D Q S FV FA AE+ +A+N +G ++G
Sbjct: 325 SINDEGLKILFEEF-GQVTSCKVMVDAQGRSKGSGFVLFATAEAGHSAINGMNGRIVGKK 383
Query: 244 PIRVS 248
P+ V
Sbjct: 384 PLYVG 388
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 137
++YV D+ + V E QL +F +V R+C D S L + +V F + A AL
Sbjct: 38 SLYVGDLAESVDETQLHAVFSQVAPLVSVRVCRDIVSGVSLGYGYVNFYSRQEATCALE- 96
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L F P+ + + +P+ R+ ++ N++ + ++ F
Sbjct: 97 ---ALNFAPLSGKHIRVMFSNRDPSL-------RKSGRANLFVKNLEPSIDSKNLYEMFS 146
Query: 198 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN 234
S G + ++ D S FV++ ESA A+N
Sbjct: 147 SF-GTILSCKVATDSAGQSKGYGFVQYETEESAQDAIN 183
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 76 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAA 134
V TV+V++ E + LF +CG++ + R N+ RF +V+FT A AA
Sbjct: 873 VTDTTVFVTNFPPTADENYIRELFHSCGEIAEVRFPSLKYNTHRRFCYVQFTSSSDAYAA 932
Query: 135 LSLAGTMLGFYPVRVL----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
L LG V+ PS+ + RS E R IY N+ K T+G
Sbjct: 933 TGLNEKDLGGNLRLVVKISDPSQRQV---------RSGAYEE--GREIYVCNLPYKTTEG 981
Query: 191 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
D+ F + G+V+ +R+ TR AFV FA + + AAL
Sbjct: 982 DLVELF-TAYGDVESVRIPTKVNGETRGFAFVTFATKDQSNAAL 1024
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 60 GKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICG 112
G R RT Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 184 GGRGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSG 243
Query: 113 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDE 170
V +VEF DEE A+ L G L P+ ++ ++ NP S ++
Sbjct: 244 RSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQ 299
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 229
+ +Y NI +T+ D++ FE GE+ ++L + +R FV+F A
Sbjct: 300 NSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQA 358
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L PIRV
Sbjct: 359 REALEKMNGFDLAGRPIRVG 378
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 11/189 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
V+V D+ + V+ E L + F G+V + ++ D + + FV F +++ A A++ +
Sbjct: 227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE--DEREMCSRTIYCTNIDKKVTQGDIKLF 195
G +G VR + + N L + + + + ++Y NI ++ T D++
Sbjct: 287 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 346
Query: 196 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-LNCSGAVLGSLPIRVSPSKTPV 254
F S G++ +R+ + R AFV + E A A + +G + +R S +T
Sbjct: 347 F-STYGDIAEVRIFK----TQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRCSWGRTQA 401
Query: 255 RPRAPRPPL 263
P PL
Sbjct: 402 VPNQALNPL 410
>gi|225554943|gb|EEH03237.1| RNA-binding protein Prp24 [Ajellomyces capsulatus G186AR]
Length = 1309
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 13/187 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 860 TVIVENLPSGVTETRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTAIAAHAATELN 919
Query: 139 GT-------MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
GT + G LP I+ +PT E R I+ +N+D K T+ D
Sbjct: 920 GTQQEVVGDLAGSADSMKLPLVVKIS--DPTKRQERTGPTEE-GREIHVSNLDWKATEDD 976
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 250
+ F + G+V+ R+ +++ FV F ESA A+L + + S P+ V S
Sbjct: 977 LVELF-AAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAMNEQLFRSRPLHVHIS 1035
Query: 251 KTPVRPR 257
V R
Sbjct: 1036 TPTVAKR 1042
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
R ++VS++D + TE+ L LF GQV RI N + F FV F +E A A+L++
Sbjct: 961 REIHVSNLDWKATEDDLVELFAAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAM 1020
Query: 138 AGTMLGFYPVRVLPSKTAIA 157
+ P+ V S +A
Sbjct: 1021 NEQLFRSRPLHVHISTPTVA 1040
>gi|161078704|ref|NP_001097953.1| CG34354, isoform A [Drosophila melanogaster]
gi|158030423|gb|ABW08789.1| CG34354, isoform A [Drosophila melanogaster]
Length = 525
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
++V D+ ++ +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 138 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 188
G LG + R P+ A P ++ + T+YC I+ ++
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
+I S G +Q +R+ D + AFV F+ E+A A+
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKDKGY----AFVRFSTKEAATHAI 258
>gi|393227010|gb|EJD34711.1| hypothetical protein AURDEDRAFT_109252 [Auricularia delicata
TFB-10046 SS5]
Length = 1014
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 136
+ T+YV++ ++ + + LF G ++D R S RF +V+FT A A+LS
Sbjct: 661 KSTLYVTNFPERTDDTAMRDLFGQFGVLLDVRWPSKKFKSTRRFCYVQFTSPAAAEASLS 720
Query: 137 LAGTMLGFYPVRVLPS-KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
L G L P K ++ +PT + + + R +Y + + + +++
Sbjct: 721 LHGRELE-------PGMKLSVLMSDPT-RKKERTDADANERELYIAGLSRFTKREELQAL 772
Query: 196 FESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
F+ G ++ +R+ L D H AFVEFA SA + L+ + L S I V+ + V
Sbjct: 773 FQQF-GTIKDIRISLDDNGHCKGFAFVEFAEPRSAHSGLSANNFELKSRRIAVTLADPRV 831
Query: 255 RPR 257
+ +
Sbjct: 832 KAK 834
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 62 RRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-- 116
RR + N + + E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 6 RRFRDKKDNVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 65
Query: 117 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE---DEREM 173
++EF D A++L+G +L PV V PS+ V +
Sbjct: 66 SKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVTGPYGA 125
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIA 231
R +Y N+ +T+ +++ FE G+++ ++L D + H FV+FA E A A
Sbjct: 126 VDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKA 184
Query: 232 A 232
+
Sbjct: 185 S 185
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVE 222
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 17 PEADPERD--QRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 73
Query: 223 FAMAESAIAALNCSGAVLGSLPIRVSPSKT 252
F A S A+ SG +L P+ V PS+
Sbjct: 74 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 103
>gi|452840300|gb|EME42238.1| hypothetical protein DOTSEDRAFT_73158 [Dothistroma septosporum
NZE10]
Length = 379
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTD-EEGARAALSL 137
+ V ++ +VT++ L F G V R+ D + F FVEFTD E+G +AA +
Sbjct: 245 IMVGNLAGEVTDDSLTKAFANYG-VNKARVIRDKRTTKSKGFGFVEFTDGEQGFKAAREM 303
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
+G +G +PV + ++T +AP+ + + + + N D K Q D
Sbjct: 304 SGKYIGSHPVTIQRARTNVAPI----VKKDHHNKHKGKNNNHYKNKDIKQHQKD 353
>gi|443682493|gb|ELT87074.1| hypothetical protein CAPTEDRAFT_222846 [Capitella teleta]
Length = 841
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
R +VS++ V E++L +F G+V++ R+ + + FA++EF DE A+ AL+L
Sbjct: 604 RKAFVSNLSYDVDEQRLQEIFSKLGEVINVRLVTNFKGQSKGFAYIEFKDELLAQKALTL 663
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
M+ P+ V + P S + ++ + + + ++ F+
Sbjct: 664 DRMMVNNRPMFVSECNKSRDPSQKFKFATS-----LEKNKLFVKGLPRTTGRDAVENIFK 718
Query: 198 SVCGEVQRLRLLGDYQH--STRIAFVEF-AMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
G ++ +RL+ Y++ S +A+VEF + +E+A A + G ++G I V+ S P
Sbjct: 719 QY-GAIKDVRLV-TYRNGVSKGLAYVEFVSESEAAQAVMKADGLMVGDHEISVAISNPPE 776
Query: 255 RPRA 258
R ++
Sbjct: 777 RQQS 780
>gi|115398692|ref|XP_001214935.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191818|gb|EAU33518.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1291
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 16/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ E+ + LF G+++D R N+ RF +V+F E A+ A L
Sbjct: 901 TLFVTNFPPTADEKYIRDLFHEFGEIIDIRFPSLKYNTHRRFCYVQFKTGEAAQNATKLD 960
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKLF 195
GT++G + V P + +R R I+ +N+D K + D+K
Sbjct: 961 GTVVG----------NNLHLVAKISDPSRKQDRHGPMYEGREIHVSNVDWKANEDDLKEL 1010
Query: 196 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
F S G V+ +R+ ++ +V F+ E A AAL S P+ V
Sbjct: 1011 F-SKYGHVELVRIPRKVDGGSKGFGYVVFSTKEEAQAALALHEHEFRSRPLHV 1062
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEE 129
E ++VYV ++D T E++ F CG V + C R G P FA+VEFT++E
Sbjct: 74 EADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKG---FAYVEFTEKE 130
Query: 130 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 165
G + AL++ ++L ++V P +T ++ T P
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKPGMSTTNRP 166
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAM 225
E++ E ++++Y N+D T +I+ F CG V R+ + D H A+VEF
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHG-CGSVSRVTIQCDRFSGHPKGFAYVEFTE 128
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT--PVRPRAPRPPL 263
E AL + ++L I+V P +T P RPP
Sbjct: 129 KEGMQNALAMTDSLLRGRQIKVDPKRTNKPGMSTTNRPPF 168
>gi|294877113|ref|XP_002767904.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
gi|239869872|gb|EER00622.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
Length = 289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR + +D +RR+ VYV ++D+ + + L F G ++ C++ P+ R F
Sbjct: 120 CRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGF 179
Query: 121 AFVEFTDEEGARAALS-LAGTMLGFYPVRVLP-SKTAIAPVNPTFLPRSEDEREMCSRTI 178
FV F +E A AA++ L G +G V V KTA RS+ + + +
Sbjct: 180 GFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFKKTA---------DRSDGSPKNFT-NV 229
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
Y +I T+ I+ F GE+ + D + R AFV FA E A AA+
Sbjct: 230 YIKHIPPSWTEEKIREEF-GAFGEITSFAMQTDPK-GRRFAFVNFAEFEQARAAV 282
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 16/200 (8%)
Query: 60 GKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICG 112
G R RT Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 180 GGRGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSG 239
Query: 113 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDE 170
V +VEF DEE A+ L G L P+ ++ ++ NP S ++
Sbjct: 240 RSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQ 295
Query: 171 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 229
+ +Y NI +T+ D++ FE GE+ ++L + +R FV+F A
Sbjct: 296 NSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQA 354
Query: 230 IAAL-NCSGAVLGSLPIRVS 248
AL +G L PIRV
Sbjct: 355 REALEKMNGFDLAGRPIRVG 374
>gi|443722844|gb|ELU11546.1| hypothetical protein CAPTEDRAFT_164502 [Capitella teleta]
Length = 629
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ ++D+ + + L F G ++ C+I D N L + FV F
Sbjct: 88 SQRDPSLRKSGVGNIFIKNLDKNIDNKALYDTFSAFGNILSCKIAMDQNGSLGYGFVHFE 147
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCSRTIYCT 181
EE AR ++ ML L K F+ R E ++ +Y
Sbjct: 148 TEEAARNSIEKVNGML-------LNGKKVFV---GRFMSRKERLEMLGDKAKKFTNVYVK 197
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N+++ + ++ FE V G++ +++ + R FV F E+A A+
Sbjct: 198 NLNETMDDKKLREMFE-VFGKIISAKMMNTEEGQKRGFGFVSFDDHEAAAKAV 249
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 18/154 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ VTE L F T G V+ R+C D L +A+V F A AL
Sbjct: 13 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 72
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F ++ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 73 ----MNFDAIKGRPIRIMWSQRDPSL-------RKSGVGNIFIKNLDKNI---DNKALYD 118
Query: 198 --SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 229
S G + ++ D S FV F E+A
Sbjct: 119 TFSAFGNILSCKIAMDQNGSLGYGFVHFETEEAA 152
>gi|339238293|ref|XP_003380701.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
Length = 1241
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 62 RRMNCRTSNAQQDEVIRR---------------TVYVSDIDQQVTEEQLATLFLTCGQVV 106
++ S+A+Q EV+ + TV+VS++D +++E+L G+VV
Sbjct: 658 KKTKTAESHAKQAEVVEQSTLETTNDKSTKHANTVFVSNLDFALSKERLKDTMAEAGEVV 717
Query: 107 DCR-ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 165
D R I PN +A+V++ DE + AL + + P+ V + + + P
Sbjct: 718 DVRMIMLRPNRSKGYAYVDYKDEASVKKALKMDRRCIDGRPMYVSVCRGDVETGQQSDKP 777
Query: 166 RSEDERE--MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVE 222
S + + ++ NI T+ +++ F G+++ +RL L S +A+VE
Sbjct: 778 NSGFQYSVGLEKNKLFVKNIPTFATENEVETLFRQY-GDLRSVRLVLHKSGRSKGLAYVE 836
Query: 223 FAMAESAI-AALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
F E+A A L +GA + V S P PR R
Sbjct: 837 FDNEEAAERARLGQNGAHFLGKRLSVEFSNPP--PRQDR 873
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV------VDCRICGDPNSVLRFAFVEFTD 127
+EV +R+VY+ +D T E+L F +CGQ+ VD + G P FA+VEF D
Sbjct: 56 EEVDKRSVYIGSVDYGSTPEELQEHFKSCGQINRITILVD-KYSGHPKG---FAYVEFAD 111
Query: 128 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 164
E+ + +L L G++ ++V+ +T + P FL
Sbjct: 112 EQSVQNSLLLNGSLFRGRQLKVMQKRTNV----PGFL 144
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMA 226
D E+ R++Y ++D T +++ F+S CG++ R+ +L D H A+VEFA
Sbjct: 54 DREEVDKRSVYIGSVDYGSTPEELQEHFKS-CGQINRITILVDKYSGHPKGFAYVEFADE 112
Query: 227 ESAIAALNCSGAVLGSLPIRVSPSKTPV 254
+S +L +G++ ++V +T V
Sbjct: 113 QSVQNSLLLNGSLFRGRQLKVMQKRTNV 140
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALS-L 137
+YV D+ + V EE L F G V R+C D + LR+ +V + A AL L
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+++ P+RV+ S R D R I+ N+ V ++ F
Sbjct: 183 NHSLVLDKPIRVMWSN------------RDPDARRSGVGNIFVKNLSSSVDNASLQELF- 229
Query: 198 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
S G+V ++ + ++R FV+F ESA A+ N +G++ + V+
Sbjct: 230 SKFGDVLSCKVAKNEDGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHVA 282
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 136
RT+ + +VT L F+ G V D I D S A+VEF +E ALS
Sbjct: 154 RTIMCMQLSAKVTNRDLEDFFMRAGVVRDVHIIADRQSRRSKGIAYVEFQEESSVFTALS 213
Query: 137 LAGTMLGFYPVRVLPS-----KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
+G + P+ + P+ + A A N L ++E +++ +++ NI + + QG
Sbjct: 214 FSGQKVHGIPIMIQPTMAEKNRLAAAAEN---LKKAEGPKKLYVGSLHY-NITEDMLQGI 269
Query: 192 IKLFFESVCGEVQRLRLLGDYQH--STRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
F G V+R+ ++ D S AFVEF ++SA A+ N +G L P++V+
Sbjct: 270 FSPF-----GNVERVSIMRDTATNVSRGYAFVEFRDSDSAERAMANLNGFELAGRPMKVN 324
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAA 232
+RTI C + KVT D++ FF G V+ + ++ D Q S IA+VEF S A
Sbjct: 153 NRTIMCMQLSAKVTNRDLEDFFMR-AGVVRDVHIIADRQSRRSKGIAYVEFQEESSVFTA 211
Query: 233 LNCSGAVLGSLPIRVSPS 250
L+ SG + +PI + P+
Sbjct: 212 LSFSGQKVHGIPIMIQPT 229
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 20/174 (11%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +RR+ +++ ++D+ + + L F G ++ C++ D N + FV F
Sbjct: 87 SQRDPSLRRSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
+E A A+ ML +V + F R E E E ++ +Y
Sbjct: 147 TQEAADKAIEKMNGML-LNDRKVFVGR---------FKSRKEREAEFGAKAREFTNVYIK 196
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
N + ++ +FE G+ ++++ D ++ FV F E A A++
Sbjct: 197 NFGDDMDDERLREYFEQYVGKTLSVKVMMDEGGKSKGFGFVSFERHEDAQKAVD 250
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 18/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++Y+ D+ VTE L F G ++ R+C D L +A+V F A AL
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F V+ P + + +P+ R I+ N+DK + D K ++
Sbjct: 72 ----MNFDVVKGKPIRIMWSQRDPSL-------RRSGVGNIFIKNLDKSI---DNKALYD 117
Query: 198 --SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
S G + +++ D S FV F E+A A+ +L
Sbjct: 118 TFSAFGNILSCKVVCDENGSKGYGFVHFETQEAADKAIEKMNGML 162
>gi|195574479|ref|XP_002105216.1| GD21365 [Drosophila simulans]
gi|194201143|gb|EDX14719.1| GD21365 [Drosophila simulans]
Length = 363
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
++V D+ ++ +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 99 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 158
Query: 138 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 188
G LG + R P+ A P ++ + T+YC I+ ++
Sbjct: 159 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 218
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
+I S G +Q +R+ D + AFV F+ E+A A+
Sbjct: 219 NEEILQKTFSPYGTIQEIRVFKDKGY----AFVRFSTKEAATHAI 259
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
E A+ A+S ML + K + F R E E E+ +R + TNI K
Sbjct: 147 THEAAQQAISTMNGML------LNDRKVFVG----HFKSRREREAELRARAMEFTNIYVK 196
Query: 187 VTQGDI------KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL 233
Q D+ LF S G++ ++++ D HS FV F E A A+
Sbjct: 197 NLQVDMDEQGLQDLF--SQFGKLLSVKVMKDNNGHSRGFGFVNFEKHEEAQKAV 248
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L FL G ++ R+C D LR+A++ F A AL +
Sbjct: 12 SLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A++ +L
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAISTMNGML 162
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 71 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 130
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + + + + I+ ++ +V D
Sbjct: 131 AMQTLNGRRVHQSEIR----------VNWAYQSNTTSKEDTSNHFHIFVGDLSNEVND-D 179
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
I + S G V R++ D + +AF + AE A+++++ G LGS IR
Sbjct: 180 ILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD--GEWLGSRAIR 237
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF-TDEEG 130
+E+ R +YV +I + VT ++L+ +F G VV + D S RF FV T EE
Sbjct: 64 EELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEV 123
Query: 131 ARAALSLAGTMLGFYPVRV------LPSKTAIAPVN-PTFLPRSEDEREMCSRTIYCTNI 183
A A SL T +G ++V LP+ A AP + P+F+ +Y N+
Sbjct: 124 AAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPESEPSFVD--------SQYKVYVGNL 175
Query: 184 DKKVTQGDIKLFFESVCGEVQRL---RLLGDYQHSTRIAFVEFAMAESAIAALNC 235
KKVT +K FF S GEV R+ G + S FV F+ E AA++
Sbjct: 176 AKKVTTEVLKNFF-SEKGEVLSATVSRIPGTPK-SKGYGFVTFSSEEEVEAAVST 228
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLR-- 119
R+N ++ ++D+ T++V D+ VT+ L F + V ++ D ++
Sbjct: 166 RLNWASAGEKRDDTPEYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKG 225
Query: 120 FAFVEFTD-EEGARAALSLAGTMLGFYPVRVLP--SKTAIAPVNPTFLPRS---EDEREM 173
+ FV+F D E ARA + G P+R+ P S+ V +P S + E +
Sbjct: 226 YGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTGGVVQERVPNSQGAQSENDP 285
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA- 232
+ TI+ +D VT+ +K F S GEV +++ R FV+F SA A
Sbjct: 286 NNTTIFVGGLDPNVTEDTLKQVF-SPYGEVVHVKI----PVGKRCGFVQFVTRPSAEQAL 340
Query: 233 LNCSGAVLGSLPIRVS 248
L GA++G+ +R+S
Sbjct: 341 LMLQGALIGAQNVRLS 356
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 131
DEV RT+++ D+ + E + F G+V + ++ D NS + + FVEFT +
Sbjct: 89 DEV--RTLWIGDLQYWMDENYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFT----S 142
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
RAA A +L Y +++P+ +N + E + TI+ ++ VT
Sbjct: 143 RAA---AERVLQTYNGQMMPNVDLTFRLN--WASAGEKRDDTPEYTIFVGDLAADVTDYL 197
Query: 192 IKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA-MAESAIAALNCSGAVLGSLPIRVS 248
++ F V+ +++ D + FV+F E A A +G S P+R+
Sbjct: 198 LQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIG 257
Query: 249 PSKT 252
P+ +
Sbjct: 258 PAAS 261
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 111
KR G ++ +T +A D + ++V + V ++ L F G+V+ R+
Sbjct: 377 NKRKGDTEDGSAKKAKTDDASGD---IKNLFVGGLSWNVDDDWLKKEFEKFGEVISARVI 433
Query: 112 GDPNSVLR--FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 168
+ + F +V+F E AR A+ ++AGT + + V +A P P RS
Sbjct: 434 TERGTERSKGFGYVDFASPEDARKAVEAMAGTEIDGRTINV--DFSAPKPERPPQEKRSF 491
Query: 169 DEREMC--SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVEF 223
+ E+ + T++ N+ TQ + F S G++ +RL D + + RI +VEF
Sbjct: 492 GQEELSAPTTTLFIGNLPFSATQDSVYEAF-SEYGDINSVRLPTDPE-TERIKGFGYVEF 549
Query: 224 AMAESAIAALNC 235
A E+A AA+N
Sbjct: 550 ATQEAATAAVNV 561
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 135
++YV D+ VTE L +F G V R+C D SV R +A+V F + A AL
Sbjct: 35 SLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRD--SVTRRSLGYAYVNFHNVADAERAL 92
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
L + P+R + + +PT R+ + ++ N+DK + D K
Sbjct: 93 DT----LNYSPIRGKQCRIMWSHRDPTL-------RKAGNANVFVKNLDKTI---DNKAL 138
Query: 196 FE--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
++ S+ G + ++ D +R FV F ESA A+ +G ++G + V P
Sbjct: 139 YDTFSLFGNILSCKVATDDDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGP 196
>gi|242013287|ref|XP_002427343.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511696|gb|EEB14605.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 59 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-- 116
QGK + + SN+ + V+ + +T+ L +F + G++ C++ + S
Sbjct: 5 QGKNVIMEQVSNSANTPTDHNNLIVNYLPDTMTQTDLQKMFESFGEIESCKLIMNKVSGH 64
Query: 117 VLRFAFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 175
+ + FV+F + + A+ ALS L G +L ++V ++ A P+ +
Sbjct: 65 SMGYGFVKFKNHKDAQNALSNLDGLLLQHKKIKVSFARPANEPIK--------------T 110
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL---GDYQHSTRIAFVEFAM---AESA 229
+Y + + +T+ D+ F S G+V ++++ GD + + I FV F AE+A
Sbjct: 111 ANVYVSGLKNTITEADLINMF-SKYGKVLTVKVMNNNGDGRKAMAIGFVRFEKHQCAENA 169
Query: 230 IAALNCSGAVLGSLPIRVS 248
I L+ + + PI VS
Sbjct: 170 IQNLDQTKPLENPTPIHVS 188
>gi|156387980|ref|XP_001634480.1| predicted protein [Nematostella vectensis]
gi|156221563|gb|EDO42417.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 137
T+YV +D++V+E + LFL G VV+ + D + L + FVEF EE A A+ +
Sbjct: 14 TIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKV 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV + + ++ ++ N+D +V D KL
Sbjct: 74 M-NMIKVYGKPIRVNKAS-------------AHNKNLDVGANLFIGNLDTEV---DEKLL 116
Query: 196 FESVCG-----EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
+++ + ++ D +S AF+ FA +++ AA+ +G L + PI VS
Sbjct: 117 YDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVS 175
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ +ID + + L F G ++ C++ D + FV F
Sbjct: 87 SQRDPALRKSGVGNIFIKNIDDSIDNKALYDTFSAFGNILSCKVVCDERGSKGYGFVHFE 146
Query: 127 DEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
+E A RA ++ G +L V V F R E E E ++ IY
Sbjct: 147 TQEAANRAIETMNGMLLNDRKVFV-----------GHFKSRKEREVEFGTKVMKFTNIYI 195
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
N +T +K F S G+ +R++ D + +R FV +A E A A++
Sbjct: 196 KNFGDNLTDEKLKEAF-SAFGKTLSVRVMRDEKGRSRGFGFVNYAHHEDAQKAVD 249
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G +V R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ I+ NID + D K +
Sbjct: 72 MNYDVIKGRPIRIMWSQ------------RDPALRKSGVGNIFIKNIDDSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D + S FV F E+A A+ +L
Sbjct: 117 DTFSAFGNILSCKVVCDERGSKGYGFVHFETQEAANRAIETMNGML 162
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
V+V ++D ++ EE++ F T G + + I D N + F FV F D E ARAA+ ++
Sbjct: 217 NVFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETM 276
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM------CSRTIYCTNIDKKVTQGD 191
+ LG + V + L R +E+ M +Y N+D +
Sbjct: 277 NNSQLGSRTIYV--GRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDET 334
Query: 192 IKLFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAI-AALNCSGAVLGSLPIRVS 248
+K F S G + +++ D + S FV F E A AA +G ++ PI V+
Sbjct: 335 LKQEF-SRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVA 392
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 20/159 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGA-RAALS 136
++YV D+D+ V E QL T+F G V R+C D L + +V ++ A RA +
Sbjct: 39 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 98
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T + +R++ S R R+ I+ N+D+ + D K
Sbjct: 99 LNYTPINGKTIRIMWSH------------RDPSTRKSGVGNIFIKNLDESI---DNKALH 143
Query: 197 ESVC--GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
++ G + ++ S FV F E+A A+
Sbjct: 144 DTFIAFGPILSCKIAHQDGRSKGYGFVHFETDEAANLAI 182
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 136
RT++V+ + ++ E L F G+VVD RI D + A+VEF +E AA+
Sbjct: 154 RTIFVAQVARKADERDLFQFFSEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQEQCVAAVQ 213
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+G +L +PV V+ + A + E ++ ++ + N+ + + D++ F
Sbjct: 214 KSGQLLCGFPV-VVQASQAEKNQAARLAAQVAGELDLPAK-LQVDNLHMDIAEDDLQTLF 271
Query: 197 ESVCGEVQRLRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRV 247
S G+V +R+ ++ ST VEF A+ A+A LN +L +R+
Sbjct: 272 -SPFGKVLSVRINKEHGRSTGKGVVEFKTLQDAQKAVAHLNGFDLAGKALNVRI 324
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 170 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAE 227
+R+M RTI+ + +K + D+ FF S G+V +R++ D Q S IA+VEF E
Sbjct: 150 DRDM--RTIFVAQVARKADERDLFQFF-SEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQE 206
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKT 252
+AA+ SG +L P+ V S+
Sbjct: 207 QCVAAVQKSGQLLCGFPVVVQASQA 231
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D S L +A+V F A+ L +
Sbjct: 3 SLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLET 62
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ PVR++ S+ R R+ I+ N++K + D + F
Sbjct: 63 MNLDVIKGKPVRIMWSQ------------RDPSLRKSGVGNIFVKNLEKSI---DNRALF 107
Query: 197 ESVC--GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSKT 252
++ G + +++ D S FV F ESA A+ +G VL SL + V K+
Sbjct: 108 DAFSGFGNILSCKVVSDENGSKGYGFVHFETQESAEKAIEKMNGIVLKSLKVFVGHFKS 166
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 23/175 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ ++V ++++ + L F G ++ C++ D N + FV F
Sbjct: 78 SQRDPSLRKSGVGNIFVKNLEKSIDNRALFDAFSGFGNILSCKVVSDENGSKGYGFVHFE 137
Query: 127 DEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
+E A A+ + G +L V V F R E E E+ +R +Y
Sbjct: 138 TQESAEKAIEKMNGIVLKSLKVFV-----------GHFKSRKERELELGARAREFTNVYI 186
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
N + + + F G ++++ D + ++ FV +A E A A++
Sbjct: 187 KNFGEDMDNARLGEIF-GRFGRALSVKVMTDERGRSKGFGFVSYATHEDAQRAVD 240
>gi|345484300|ref|XP_003424998.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
half pint-like [Nasonia vitripennis]
Length = 605
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 124 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPATQKHKGFAFVEYEIPEAAQLALEQM 183
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 184 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEEDIKSVFE 241
Query: 198 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + +L G H + F+E+ +SA+ A+ LG +RV + TP
Sbjct: 242 AF-GPITYCKLAQGSSPHRHKGYGFIEYESMQSALEAIASMNLFDLGGQYLRVGRAITP 299
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 24/136 (17%)
Query: 50 AFQKRNGYSQGKRRMNC--RTSNAQQ-----DEVIRRT-----VYVSDIDQQVTEEQLAT 97
A ++ NG G R + R SN Q DE+ + +Y++ I Q +TEE + +
Sbjct: 179 ALEQMNGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHYNRIYIASIHQDLTEEDIKS 238
Query: 98 LFLTCGQVVDCRIC--GDPNSVLRFAFVEFTDEEGARAALSLAGTM----LGFYPVRVLP 151
+F G + C++ P+ + F+E+ E ++AL +M LG +RV
Sbjct: 239 VFEAFGPITYCKLAQGSSPHRHKGYGFIEY---ESMQSALEAIASMNLFDLGGQYLRV-- 293
Query: 152 SKTAIAPVNPTFLPRS 167
AI P N P S
Sbjct: 294 -GRAITPPNALMGPPS 308
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 7/174 (4%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 136
RT++ + Q++ L F + G+V + ++ D +S A+VEF D E AL
Sbjct: 104 RTIFCMQLAQRIRVRDLEEFFSSVGKVREVKLIQDKHSKRSKGIAYVEFKDLESIPLALG 163
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L+G L P+ V P+++ + L S + + +Y ++ + +T+ IK F
Sbjct: 164 LSGQKLLGVPIVVQPTQSEKNKIAAAQL--SLQKAALGPTKLYVGSLHENITEEMIKGIF 221
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 248
S G V++++++ D ++R F+ FA AE A AL+ +G + PI+++
Sbjct: 222 -SPFGRVEQVQIIKDDAGASRGYGFITFAEAECAKRALDQLNGFEIAGKPIKLN 274
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEFAMAESAIA 231
+RTI+C + +++ D++ FF SV G+V+ ++L+ D +HS R IA+VEF ES
Sbjct: 103 ARTIFCMQLAQRIRVRDLEEFFSSV-GKVREVKLIQD-KHSKRSKGIAYVEFKDLESIPL 160
Query: 232 ALNCSGAVLGSLPIRVSPSKT 252
AL SG L +PI V P+++
Sbjct: 161 ALGLSGQKLLGVPIVVQPTQS 181
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 22/183 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD---PNSVLRFAFVEFTDEEGA 131
E R +Y+ +I +VTE L +F G V +I D + L + FVEF +GA
Sbjct: 8 ENKRPHLYIGNISPRVTEYMLQEVFALAGPVQQVKIIPDRTFQHGGLNYGFVEFYTMQGA 67
Query: 132 RAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
AL +LAG L ++ VN + ++ E ++C ++ +VT
Sbjct: 68 EQALQTLAGRKLFDTEMK----------VNWAYQNQTAKEDVTNHFHVFCGDLSPEVTDD 117
Query: 191 DIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPI 245
++ F S G + R++ D +AF + A AE+AI A+N G LGS I
Sbjct: 118 ILQKTF-SAFGSLSDARVMWDMASGKSRGYGFLAFRDRADAEAAINAMN--GEWLGSRAI 174
Query: 246 RVS 248
RV+
Sbjct: 175 RVN 177
>gi|355558380|gb|EHH15160.1| hypothetical protein EGK_01215 [Macaca mulatta]
Length = 424
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI +
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNCPITI 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSV--LR 119
R+N ++ ++D+ T++V D+ VT+ L F V ++ D ++
Sbjct: 195 RLNWASAGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKG 254
Query: 120 FAFVEFTD-EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS---EDEREMCS 175
+ FV+F D E ARA + G + P+R+ P+ A V +P + + + + +
Sbjct: 255 YGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSAQGVQSDNDPNN 314
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
TI+ +D VT+ +K F + G+V +++ R FV++A SA AL
Sbjct: 315 TTIFVGGLDPNVTEDMLKQVF-TPYGDVVHVKI----PVGKRCGFVQYANRSSAEEALVI 369
Query: 236 -SGAVLGSLPIRVSPSKTP 253
G ++G +R+S ++P
Sbjct: 370 LQGTLVGGQNVRLSWGRSP 388
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 16/187 (8%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG--DPNSVLRFAFVEFTDE 128
AQQ+ ++V + +V ++ L F G+V D R+ + FV F +
Sbjct: 121 AQQENQGSYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRK 180
Query: 129 EGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-----EDEREMCSRTIYCTN 182
E A A+ + G L ++V + IA + T P+ +E + + T+Y N
Sbjct: 181 EDAETAMQMMNGEKLEGRNIKVNWVTSNIA--SKTEQPKRSYDEINNETSIQNCTVYIGN 238
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-LNCSGAVLG 241
I K V D+K + G ++ +RL D + AF++F+ ESA +A L C+G ++
Sbjct: 239 IPKNVESDDLKQLL-AEYGSIEEVRLNKDKGY----AFIKFSKHESATSAILMCNGKIIN 293
Query: 242 SLPIRVS 248
+R S
Sbjct: 294 GSTLRCS 300
>gi|256085557|ref|XP_002578985.1| hypothetical protein [Schistosoma mansoni]
gi|353233139|emb|CCD80494.1| hypothetical protein Smp_078240 [Schistosoma mansoni]
Length = 949
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 45/213 (21%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 138
TV+VS++D V+EEQ+ F CG V R+ D + FA+VEF ++E + AL+L
Sbjct: 652 TVFVSNLDYSVSEEQIQHTFEKCGNVTSVRLVRDYAGRSKGFAYVEFENKESVKTALTLD 711
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSED-----------EREM----CS-------- 175
+ P+ +++ T + ED +R M C
Sbjct: 712 RQGI------TRPTSESVSCDADTQKQKEEDNSATPKPPNCYDRPMFVSICDPSRLKSCG 765
Query: 176 ----------RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS--TRIAFVEF 223
++ N+DK V D+++ F+ G + +R L Y++ A++EF
Sbjct: 766 FKYTVGKKEPEKLFVRNLDKTVKNEDLEMLFKQY-GNIVSVR-LATYRNGVPKGHAYIEF 823
Query: 224 AMAESAIAAL-NCSGAVLGSLPIRVSPSKTPVR 255
A+ A AL +G + + VS S+ PVR
Sbjct: 824 TNADDASKALVATNGLEFRNKILSVSISEPPVR 856
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4 [Oryctolagus cuniculus]
Length = 384
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRVNKAS-------------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS-- 136
+YV ++ V E++L LF G + ++ D N R F FV F E A+ A+
Sbjct: 192 NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 137 ----LAGTMLGFYPVRVLPSKTAIAPVNPTFLP-RSEDEREMCSRTIYCTNIDKKVTQGD 191
++G +L Y R + + F + E + +Y N+D +
Sbjct: 252 NGKEVSGQLL--YVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+K F S G + +++ + HS FV F+ E A A+ +G ++G+ P+ V+
Sbjct: 310 LKEVF-STYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L +F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSH------------RDPGLRKSGMGNIFIKNLENSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ + S FV F E+A A+N +L
Sbjct: 117 DTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGML 162
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 16/186 (8%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 125
T+ + Q+ ++YV ++D VTE L +F GQV R+C D S L +A+V F
Sbjct: 36 TAESTQNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNF 95
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
AL L + P++ + + +P+ R S I+ N+
Sbjct: 96 QSHADGEKALE----ELNYTPIKGKACRIMWSQRDPSL-------RRNGSGNIFIKNLHP 144
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 243
+ + F S G++ ++ D +++ FV + +ESA AA+ N +G +L
Sbjct: 145 AIDNKTLHDTF-SAFGKILSCKIATDENGNSKGFGFVHYEESESAKAAIENVNGMLLNDH 203
Query: 244 PIRVSP 249
+ V P
Sbjct: 204 EVYVGP 209
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGA 131
D ++R+V+VS + + + F CG + + ++ D ++ + + F+ E A
Sbjct: 19 DPSLKRSVFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDTGKIIGYCHLVFSTPEEA 78
Query: 132 RAALSLAGTMLG--FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 189
+ A+ L ++ + + + + + N P E C+ TI+ N+ T+
Sbjct: 79 QEAIKLNKQVMNGRYLDISLAKGEKKVEYKNDVKAP------EDCT-TIFVKNLAFDCTE 131
Query: 190 GDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALNCSGA 238
++ FFE CG+V +R + Y +H AF+EF M S AAL +G
Sbjct: 132 DEVGEFFEK-CGKVVNVRFVYHYSQKHFKGFAFIEFKMNSSVNAALKLNGT 181
>gi|357134255|ref|XP_003568733.1| PREDICTED: uncharacterized protein LOC100843156 [Brachypodium
distachyon]
Length = 786
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 127
T + + E +++ V +S++ +T E L LF CG+VVDC I + A+VE++
Sbjct: 342 TGSVDKAEALKKMVQISNLSLLLTVEHLKQLFGYCGKVVDCTIT----ETKQTAYVEYSK 397
Query: 128 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 160
E A AAL+L +G P+ V LP KT +A N
Sbjct: 398 PEEATAALALNNMDVGGRPLNVEMAKTLPPKTNLANSN 435
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +Y+ +D +VTE+ L +F T G V +I D NS L + FVE+ D A R
Sbjct: 88 EPNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 148 AMATLNGRRVHQSEIR----------VNWAYQSNNSNKEDTSNHFHIFVGDLSNEVND-E 196
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ L S G V R++ D + +AF E AE A+++++ G LGS IR
Sbjct: 197 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMD--GEWLGSRAIR 254
>gi|307206655|gb|EFN84627.1| Nucleolysin TIAR [Harpegnathos saltator]
Length = 274
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 31/167 (18%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 133
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCA-- 59
Query: 134 ALSLAGTMLGFYPVRVLPSKTAIAPVNP-TFLPRS---EDEREMCSRTIYCTNIDKKVTQ 189
TA+A +N +FL + ++ + T+YC +T
Sbjct: 60 -------------------ATALAAMNKRSFLDKEMKVYNQSSPTNCTVYCGGFTNGITD 100
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 236
IK F S G +Q +R+ + + AF++F E+A A+ +
Sbjct: 101 ELIKKTF-SPFGTIQDIRVFKEKGY----AFIKFTTKEAATHAIEST 142
>gi|392591591|gb|EIW80918.1| hypothetical protein CONPUDRAFT_103939 [Coniophora puteana
RWD-64-598 SS2]
Length = 1056
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
+ VYV+ + + T+E L +F T G V D R+ D N + FAFVEF E A+AALS
Sbjct: 807 KEVYVAGLSKYTTKEDLKGVFKTYGTVNDVRLVTDKNGQSKGFAFVEFESETSAQAALSA 866
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER--------EMCSRTIYCTNIDKKVTQ 189
Y +R + A+ + PR +D + E+ R++ N+ +
Sbjct: 867 NN-----YELR--SRRIAVTLADSRVKPRYQDSKDTGLGRQAELQQRSVRIRNLPAGAQE 919
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHS 215
G ++ E C ++R+ + D +
Sbjct: 920 GLLQQALEKYCV-IKRVEVFEDRHEA 944
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 100 LTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAP 158
L G + D R S RF +V++T A AL L + V PS+
Sbjct: 737 LQYGTIFDVRWPSKKYKSTRRFCYVQYTAPAAAENALVL-------HNFEVEPSRKLSVL 789
Query: 159 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR- 217
++ + + + + +Y + K T+ D+K F++ G V +RL+ D ++
Sbjct: 790 ISNPERKKERTDADANEKEVYVAGLSKYTTKEDLKGVFKTY-GTVNDVRLVTDKNGQSKG 848
Query: 218 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPR 257
AFVEF SA AAL+ + L S I V+ + + V+PR
Sbjct: 849 FAFVEFESETSAQAALSANNYELRSRRIAVTLADSRVKPR 888
>gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
gi|229299222|gb|EEN69841.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
Length = 365
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEALLWELFLQAGPVVNTHMPKDRVTQAHQGYGFVEFMSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRVNKAS-------------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI +
Sbjct: 117 YDTFSAFGVILQTPKIMRDPETGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITI 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|357631053|gb|EHJ78771.1| hypothetical protein KGM_03904 [Danaus plexippus]
Length = 591
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ +L +
Sbjct: 142 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLSLEQM 201
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G MLG ++V+ + + P + ++E + +R IY +I ++T+ DIK FE
Sbjct: 202 NGVMLGGRNIKVV-GRPSNMPQAQAVIDEIQEEAKQYNR-IYVASIHPELTEDDIKNVFE 259
Query: 198 SVCGEVQRLRL-LGDYQHSTR-IAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKT 252
+ G + +L G H + F+E+A A AIA++N LG +RV + T
Sbjct: 260 AF-GPITYCKLAYGASAHKHKGYGFIEYATLPAALEAIASMNLFD--LGGQYLRVGRAIT 316
Query: 253 P 253
P
Sbjct: 317 P 317
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 83 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV---LRFAFVEFTDEEGARAALSLAG 139
V+ + Q +TE ++ ++F G + CR+ D F FV + +EE A+ A+
Sbjct: 86 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 143
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
L YP+R K + A P+S+D +E +Y TN+ + +T+ + + F
Sbjct: 144 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 192
Query: 200 CGEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKTPVR 255
VQ+ L R +AFV F A+ AI+ALN G+ P+ V ++ R
Sbjct: 193 GTIVQKNILRDKLTGQPRGVAFVRFNKREEAQEAISALNNVIPQGGNQPLIVRVAEDHGR 252
Query: 256 PRA 258
+A
Sbjct: 253 AKA 255
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI---- 110
NGY +R+ + Q D++ +Y++++ + +TEEQL +F G +V I
Sbjct: 145 NGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDK 204
Query: 111 -CGDPNSVLRFAFVEFTDEEGARAALS 136
G P V AFV F E A+ A+S
Sbjct: 205 LTGQPRGV---AFVRFNKREEAQEAIS 228
>gi|389593531|ref|XP_003722019.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|321438521|emb|CBZ12280.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 439
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 19/189 (10%)
Query: 70 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 129
+A + + V +S I T QL +F CG + D + AFV +T EE
Sbjct: 129 SADAERTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEE 184
Query: 130 GARAALSLAGTMLGFYPVRVL---PSKTAIAPVNPTFLPRSEDEREMCSRT--------I 178
AL L G M+ PV V P A P + R +E S +
Sbjct: 185 ACEKALKLDGAMVNGNPVVVRPCPPRDDAPGPASRRDATRRGNESTTASAPSRRQLDVRV 244
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGA 238
+ VT+ ++ FF CG + + L + +AFV F AE+A A++ SG
Sbjct: 245 VVHGVPSDVTKEALRAFFSPDCGPLTDVFLKPEIG----VAFVAFTSAENAKRAISKSGE 300
Query: 239 VLGSLPIRV 247
+L +++
Sbjct: 301 MLMGTRVKI 309
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 134
T+++ +++ TEE L +F G V C + N + F FVE+ E A+ A
Sbjct: 718 TLFIKNLNFSTTEEMLKEVFSKVGTVKSCTVSKKKNKAGVLLSMGFGFVEYRKPEQAQKA 777
Query: 135 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L L G+++ + + V S+ AI PV + R ++ S+ I NI + + +I+
Sbjct: 778 LKQLQGSVVDGHKLEVKISERAIKPVVTSARQRQTAHKQKTSK-ILVRNIPFQANKQEIR 836
Query: 194 LFFESVCGEVQRLRL----LGDYQHSTRIAFVEFAMAESAIAALN 234
F S GE++ +RL G H FV+F + A A N
Sbjct: 837 ELF-STFGELKTVRLPKKMTGTGPHRG-FGFVDFLTKQDAKRAFN 879
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +YV +D +VTE+ L +F T G V + +I D NS + FVE+ D A R
Sbjct: 85 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPAAAER 144
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 145 AMQTLNGRRVHQAEIR----------VNWAYQSNTSNKEDTSNHFHIFVGDLSNEVND-E 193
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ L S G V R++ D + +AF E AE A+++++ G LGS IR
Sbjct: 194 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMD--GEWLGSRAIR 251
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 16/205 (7%)
Query: 55 NGYSQGKRRMN------CRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
NG+ GKR+ + + S + VYV + V E LA+ F +CG+VV+
Sbjct: 184 NGH--GKRKADQEAQAPAKKSRTDGEAEPTANVYVGGLSWNVDNEWLASEFQSCGEVVEA 241
Query: 109 RICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVR-VLPSKTAIAPVNPTFLP 165
R+ D + F FV F E A A+++ G + +R ++ PV
Sbjct: 242 RVMFDHQNQKSKGFGFVRFKTAEEAAKAVAMTGHEIDGRAIRCDFAAEKTDNPVE-RRAQ 300
Query: 166 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEF 223
+ D+R + T+Y + + + + F G++QR+ L D + F VEF
Sbjct: 301 KFNDQRSAPAATLYLGGLSYDLNEDAVYEAFGDF-GDIQRVSLPTDRETGAPKGFGYVEF 359
Query: 224 AMAESAIAALNC-SGAVLGSLPIRV 247
A + A AAL +G L IRV
Sbjct: 360 ADVDQATAALEAMNGKELSGRRIRV 384
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLR-- 119
R+N ++ ++D+ T++V D+ VT+ L F V ++ D +R
Sbjct: 195 RLNWASAGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTD-KLTMRTK 253
Query: 120 -FAFVEFTD-EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS---EDEREMC 174
+ FV+F D E ARA + G + P+R+ P+ A V +P + + + +
Sbjct: 254 GYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSAQGVQSDNDPN 313
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 234
+ TI+ +D VT+ +K F + G+V +++ R FV++A SA AL
Sbjct: 314 NTTIFVGGLDPNVTEDMLKQVF-TPYGDVVHVKI----PVGKRCGFVQYANRSSAEEALV 368
Query: 235 C-SGAVLGSLPIRVSPSKTP 253
G ++G +R+S ++P
Sbjct: 369 ILQGTLVGGQNVRLSWGRSP 388
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 41/202 (20%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 136
RT++V + Q+VTE+ + F G+V D R+ D S A+VEF +E +A+
Sbjct: 186 RTIFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKEAIPSAMR 245
Query: 137 LAGTMLGFYPVRVLPSK----------------------------TAIAPVNPTFLPRSE 168
LAG L YPV + PS+ + +P P
Sbjct: 246 LAGQQLCGYPVAIKPSEAEKNIAAEMAAREAAAAQQARLAELEEWSGGGDTSPNSNP--- 302
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMA 226
+ +Y +I +++ D++ FE GEV L+L D + S FV++
Sbjct: 303 ----LTFTKLYVGSIHFSISEDDLRTIFEPF-GEVISLQLHKDPETGRSRGFGFVQYKNH 357
Query: 227 ESAIAAL-NCSGAVLGSLPIRV 247
E A A +G L P++V
Sbjct: 358 EDAKKAFEQLNGLDLAGRPLKV 379
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 170 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAE 227
ER++ RTI+ + +KVT+ D+ FF S G+V+ +R++ D + A+VEF E
Sbjct: 182 ERDL--RTIFVWQLAQKVTEKDVYNFF-SAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKE 238
Query: 228 SAIAALNCSGAVLGSLPIRVSPSK 251
+ +A+ +G L P+ + PS+
Sbjct: 239 AIPSAMRLAGQQLCGYPVAIKPSE 262
>gi|325091867|gb|EGC45177.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 1309
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 13/187 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 860 TVIVENLPSGVTETRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTAIAAHAATELN 919
Query: 139 GT-------MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
GT + G LP I+ +PT E R I+ +N+D K T+ D
Sbjct: 920 GTQQEVVGDLAGSAGSMKLPLVVKIS--DPTKRQERTGPTEE-GREIHVSNLDWKATEDD 976
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 250
+ F + G+V+ R+ +++ FV F ESA A+L + + S P+ V S
Sbjct: 977 LVELF-AAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAMNEQLFRSRPLHVHIS 1035
Query: 251 KTPVRPR 257
V R
Sbjct: 1036 TPTVAKR 1042
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
R ++VS++D + TE+ L LF GQV RI N + F FV F +E A A+L++
Sbjct: 961 REIHVSNLDWKATEDDLVELFAAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAM 1020
Query: 138 AGTMLGFYPVRVLPSKTAIA 157
+ P+ V S +A
Sbjct: 1021 NEQLFRSRPLHVHISTPTVA 1040
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSV--LR 119
R+N ++ ++D+ T++V D+ VT+ L F V ++ D ++
Sbjct: 185 RLNWASAGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKG 244
Query: 120 FAFVEFTD-EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS---EDEREMCS 175
+ FV+F D E ARA + G + P+R+ P+ A V +P + + + + +
Sbjct: 245 YGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSAQGVQSDNDPNN 304
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 235
TI+ +D VT+ +K F + G+V +++ R FV++A SA AL
Sbjct: 305 TTIFVGGLDPNVTEDMLKQVF-TPYGDVVHVKI----PVGKRCGFVQYANRSSAEEALVI 359
Query: 236 -SGAVLGSLPIRVSPSKTP 253
G ++G +R+S ++P
Sbjct: 360 LQGTLVGGQNVRLSWGRSP 378
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 137
++YV ++D V+E L +F G V R+C D + L +A+V F D E + A+
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIE- 94
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L + P++ + + +P R+ S I+ N+ + D K FE
Sbjct: 95 ---QLNYTPIKGRLCRIMWSQRDPAL-------RKKGSGNIFIKNLHPDI---DNKALFE 141
Query: 198 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPSKT 252
SV G + ++ D ++ FV F SA A++ +G +L I V+P T
Sbjct: 142 TFSVFGNILSSKIATDETGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLT 200
>gi|189234753|ref|XP_974490.2| PREDICTED: similar to STE20-like kinase (yeast) [Tribolium
castaneum]
Length = 1819
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 129
QQ + VYV I ++ E+ + FL G + + DP + FAFVE+ E
Sbjct: 91 QQALALMCRVYVGSISFELKEDTIRQSFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPE 150
Query: 130 GARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
A+ AL + G M+G ++V+ + + P + ++E + +R IY +I +T
Sbjct: 151 AAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQAVIDEIQEEAKQYNR-IYVASIHPDLT 208
Query: 189 QGDIKLFFESVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAES---AIAALNCSGAVLGSL 243
+ DIK FE+ G + +L G H + F+E+ A++ AIA++N LG
Sbjct: 209 EDDIKSVFEAF-GPIIYCKLAQGSSGHKHKGYGFIEYETAQAANEAIASMNLFD--LGGQ 265
Query: 244 PIRVSPSKTP 253
+RV + TP
Sbjct: 266 YLRVGRAITP 275
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
E A+ A+S ML + K + F R E E E+ +R IY
Sbjct: 147 THEAAQNAISTMNGML------LNDRKVFVG----HFKSRREREVELGARAMEFTNIYVK 196
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESA-IAALNCSG 237
N+ V + ++ F S G++ ++++ D HS FV F E A A +N +G
Sbjct: 197 NLHVDVDEQRLQDLF-SQFGKMLSVKVMRDVSGHSRGFGFVNFEKHEEAQKAVVNMNG 253
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A++ +L
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQNAISTMNGML 162
>gi|156055250|ref|XP_001593549.1| hypothetical protein SS1G_04976 [Sclerotinia sclerotiorum 1980]
gi|154702761|gb|EDO02500.1| hypothetical protein SS1G_04976 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 998
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T+YV++ E + LF CG++ R N+ RF ++ F + E A AA L
Sbjct: 610 TLYVTNYPPPADENYMHNLFKDCGEIFSIRWPSLKFNTHRRFCYITFRNAEAASAATQLD 669
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLF 195
G +L + V P + +RE + R ++ TN+D + + D+K
Sbjct: 670 GKLL----------ENKYKLVAKYSDPAGKKQREGATAEGRELHITNLDLSLNEDDLKEV 719
Query: 196 FESVCGEVQRLRLLGDYQHSTRIA-FVEFAMAESAIAALNCSGAVLGSLPIRV 247
F + G+V+ +R+L ++ ++ A FV F + A +AL L S + V
Sbjct: 720 F-AKYGQVESVRILRTHKGESKGAGFVVFEKKDEANSALELDKTKLKSSILHV 771
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G V +I D N L + FVE+ D A
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAA 147
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 148 ERAMQTLNGRRVHQSEIR----------VNWAYQSNNANKEDTSNHFHIFVGDLSNEVND 197
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
++ L S G V R++ D + +AF E A AE A+++++ G LGS
Sbjct: 198 -EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 254
Query: 245 IR 246
IR
Sbjct: 255 IR 256
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGA-R 132
E +R +Y+ +DQ+VTEE L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 80 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 139
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 140 AMQTLNGRRVHQSEIR----------VNWAYQSNTTNKEDTSNHFHIFVGDLSNEVND-E 188
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ L S G V R++ D + +AF + AE A+++++ G LGS IR
Sbjct: 189 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD--GEWLGSRAIR 246
>gi|358248652|ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 10/184 (5%)
Query: 69 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFT 126
S D YV I TE+ + + F +CG + VDC + A + F
Sbjct: 156 SKDNGDAPTNTKAYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFK 215
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
E A+ AL+L G +G +++ P K A F P + E +R IY N+
Sbjct: 216 TEAAAKRALALDGADMGGLFLKIQPYKATRANKASDFAP---EILEGYNR-IYVGNLSWD 271
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAALNCSGAVLGSLP 244
+T+ +++ FF E+ LR D + A V+F+ ++S AL VL P
Sbjct: 272 ITEEELRKFFNGC--EITSLRFGMDKETGEFRGYAHVDFSDSQSLKTALALDQNVLFGRP 329
Query: 245 IRVS 248
+R+S
Sbjct: 330 VRIS 333
>gi|449673467|ref|XP_002159702.2| PREDICTED: nucleolysin TIAR-like [Hydra magnipapillata]
Length = 352
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 24/180 (13%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRIC------GDPNSVLRFAFVEFTDEEGARAA 134
+YV ++D++VT+ + + T + ++ GD N+ + FV+F D A +
Sbjct: 14 LYVGNLDKRVTDTMMINILRTGLPHIKEKVLSASMFPGDMNNPEGYCFVQFEDNISAMQS 73
Query: 135 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
++ L G V+V A +P +P+ S +IYC N+D + + D+K
Sbjct: 74 MNFLNGREFCGKKVKV-----NWATNSPNGMPKVIG----TSVSIYCGNLDDTIDEEDLK 124
Query: 194 LFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVS 248
FE V GE+ ++++ D HS IAF+ F AE AI ++ GA+L + I+ +
Sbjct: 125 AAFE-VFGEILNIKVVRDPVTNHSKNIAFISFTNKPDAEKAIREMH--GAMLKTRAIKTN 181
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 136
++Y ++D + EE L F G++++ ++ DP N AF+ FT++ A A+
Sbjct: 108 SIYCGNLDDTIDEEDLKAAFEVFGEILNIKVVRDPVTNHSKNIAFISFTNKPDAEKAIRE 167
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC------SRTIYCTNIDKKVTQG 190
+ G ML + KT A N +D E+ + T+Y I T+
Sbjct: 168 MHGAML-----KTRAIKTNWATRNQNQKKEEQDYDEVYKGASADNTTVYAGGIPSNCTEE 222
Query: 191 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
I+ F+ G++ +R+ + AF++F +A A+
Sbjct: 223 QIRSHFDDY-GKIVDVRIFA----AKNYAFIKFDTHANAATAI 260
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 109
F+ R+G + R+ S + D E +RTV+ + + TE + F G+V D R
Sbjct: 169 FEMRDGR---RFRVKKEASEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVR 225
Query: 110 ICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFL 164
+ D NS ++EF D A++L+G +L PV V PS K +
Sbjct: 226 LIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGA 285
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG-EVQRLRLLGDYQHSTRIAFVEF 223
R +Y N+ +T+ ++ FE EV +L L + H FV+F
Sbjct: 286 AGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEVVQLPLDLETGHCKGFGFVQF 345
Query: 224 AMAESAIAALNCSGAV-LGSLPIRVS 248
E A AA + +G + + I+VS
Sbjct: 346 THLEHAKAAQSLNGKLEIAGRTIKVS 371
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 165 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 222
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 186 PEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 242
Query: 223 FAMAESAIAALNCSGAVLGSLPIRVSPSKT 252
F A S A+ SG +L P+ V PS+
Sbjct: 243 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 272
>gi|345561329|gb|EGX44424.1| hypothetical protein AOL_s00193g6 [Arthrobotrys oligospora ATCC
24927]
Length = 744
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 23/174 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 122 CRIMWSQRDPALRKTGHGNVFIKNLDIAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 181
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCS 175
FV + E A A+ ML + K + +P+ E DE +
Sbjct: 182 GFVHYETAEAATNAIKHVNGML------LNEKKVYVG----HHIPKKERQSKFDEMKANF 231
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAE 227
+Y NID +V+ + + FE+ G++ L GD S FV F+ E
Sbjct: 232 TNVYVKNIDPEVSDDEFRTLFENF-GQITSASLARDGDSGTSRGFGFVNFSSHE 284
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 52 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEE 111
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 112 LNYTLIKGRPCRIMWSQ------------RDPALRKTGHGNVFIKNLDIAIDNKALHDTF 159
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D +++ FV + AE+A A+ +L
Sbjct: 160 -AAFGNILSCKVAQDENGNSKGYGFVHYETAEAATNAIKHVNGML 203
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 127 CRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGY 186
Query: 121 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + E A +A+ S+ G +L V V +P K ++ +E +
Sbjct: 187 GFVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 237
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAA 232
IY NID + T + + FE G++ L D + +R + ++ A A+
Sbjct: 238 NIYVKNIDPEATDDEFRALFEKY-GDITSASLAHDQEGKSRGFGFVNYIRHEDANKAVEE 296
Query: 233 LNCS 236
LN S
Sbjct: 297 LNNS 300
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + +G RA
Sbjct: 57 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 116
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 117 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDGAIDNKALHDTF 164
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D + +S FV + AE+A +A+ +L
Sbjct: 165 -AAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANSAIKSVNGML 208
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 137
++YV D+++ VTE L +F T G V R+C D L +A+V + + A AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD- 75
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
L + ++ P++ + +P+ R+ + I+ N+DK + D K F+
Sbjct: 76 ---TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKSI---DNKALFD 122
Query: 198 --SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
S+ G + ++ D + S FV + ESA A+ +G LGS + V P
Sbjct: 123 TFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGP 178
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 137
V+V ++D ++ EE++ F T G + + I D N + F FV F D E ARAA+ ++
Sbjct: 216 NVFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETM 275
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM------CSRTIYCTNIDKKVTQGD 191
+ LG + V + L R +E+ M +Y N+D +
Sbjct: 276 NNSQLGSRTIYV--GRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDET 333
Query: 192 IKLFFESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAI-AALNCSGAVLGSLPIRVS 248
+K F S G + +++ D + S FV F E A AA +G ++ PI V+
Sbjct: 334 LKQEF-SRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVA 391
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 20/159 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGA-RAALS 136
++YV D+D+ V E QL T+F G V R+C D L + +V ++ A RA +
Sbjct: 38 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 97
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T + +R++ S R R+ I+ N+D+ + D K
Sbjct: 98 LNYTPINGKTIRIMWSH------------RDPSTRKSGVGNIFIKNLDESI---DNKALH 142
Query: 197 ESVC--GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
++ G + ++ S FV F E+A A+
Sbjct: 143 DTFIAFGPILSCKIAHQDGRSKGYGFVHFETDEAANLAI 181
>gi|325186713|emb|CCA21261.1| RNA polymerase Ispecific transcription initiation factor rrn3
putative [Albugo laibachii Nc14]
Length = 988
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 137
T+Y+ ++D +V+EE L L L G VV+ + D + + FVEF EE A A+ +
Sbjct: 718 TIYIGNLDDKVSEELLWELMLQAGSVVNVHMPRDKVTTNHQNYGFVEFRTEECAEYAIKI 777
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P+RV + S+D++ + ++ N+D +V + +
Sbjct: 778 MN-MIQVYGKPIRVKKA--------------SQDKKTLDIGANLFIGNLDPEVDEKLLYD 822
Query: 195 FFESVCGEVQRLRLLG--DYQHSTRIAFVEFAMAESAIAALNCSGA 238
F + G ++ +++ D +HS F+ F E++ A+ C A
Sbjct: 823 TFSAFGGIIETPKIMRDPDTKHSRGFGFISFDAFEASDLAIECMNA 868
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
E A+ A+S ML + K + F R E E E+ +R IY
Sbjct: 147 THEAAQNAISTMNGML------LNDRKVFVG----HFKSRREREVELGARAMEFTNIYVK 196
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLL-GDYQHSTRIAFVEFAMAESA-IAALNCSG 237
N+ V + ++ F S G++ ++++ D HS FV F E A A +N +G
Sbjct: 197 NLHVDVDEQRLQDLF-SQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNMNG 253
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLPPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A++ +L
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQNAISTMNGML 162
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 67 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV------VDCRICGDPNSVLRF 120
RT++ QD+V RR+VYV +++ T + L F +CGQ+ VD + G P +
Sbjct: 29 RTNDTSQDDVDRRSVYVGNVEYSATPQNLQEYFKSCGQINRITIMVD-KWTGHPKG---Y 84
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 156
A++EF EE AL L T+ ++V + I
Sbjct: 85 AYIEFAQEESVENALLLNETLFKERLIKVTSKRKNI 120
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 22/180 (12%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGY 178
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCS 175
FV + E A A+ ML L K +P+ E +E +
Sbjct: 179 GFVHYETAEAANNAIKHVNGML-------LNEKKVFVG---HHIPKKERMSKFEEMKANF 228
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
IY NID VT D + FE G++ + D Q +R FV + E+A A++
Sbjct: 229 TNIYVKNIDLDVTDEDFRELFEK-HGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVD 287
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 125
T+ AQQ ++YV ++D VTE L LF + GQV R+C D L +A+V +
Sbjct: 37 TTAAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 96
Query: 126 -TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 184
+ E+G +A L T++ P R++ S+ +P R+ ++ N+D
Sbjct: 97 NSSEDGEKALEELNYTVIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLD 144
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDY-QHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ + F + G + ++ D +S FV + AE+A A+ +L
Sbjct: 145 HAIDNKALHDTF-AAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGML 200
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 135
++TV+V ++ +V +E+L LF CG VV R+ D + + F FV F +GA AL
Sbjct: 341 KQTVFVGNLAHEVQDEELWKLFAECGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALAL 400
Query: 136 SLAGTMLGFYPVRVLP-SKTAI 156
+ G + P+RV P SK A+
Sbjct: 401 EMTGREVSGRPIRVSPFSKQAV 422
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 21/143 (14%)
Query: 121 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-DEREMCSRTIY 179
A+V F +E ALSL G +L +RV + P+S+ E++ T++
Sbjct: 300 AYVVFKAKEAVNKALSLNGGVLFGNHIRV----------DCVGAPKSQVSEKQ----TVF 345
Query: 180 CTNIDKKVTQGDI-KLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALNCS 236
N+ +V ++ KLF E CG+V +RL+ D FV F + A AL +
Sbjct: 346 VGNLAHEVQDEELWKLFAE--CGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALALEMT 403
Query: 237 GAVLGSLPIRVSP-SKTPVRPRA 258
G + PIRVSP SK V +A
Sbjct: 404 GREVSGRPIRVSPFSKQAVPKKA 426
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGA-R 132
E +R +Y+ +DQ+VTEE L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 78 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 137
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 138 AMQTLNGRRVHQSEIR----------VNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEV 187
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F S G V R++ D + +AF + AE A+++++ G LGS IR
Sbjct: 188 LTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD--GEWLGSRAIR 244
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 63 RMNCRTSNAQ-QDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPN 115
R+N ++ + QD+ T++V D+ VT+ L F + +VV R+ G
Sbjct: 140 RLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTG--- 196
Query: 116 SVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS------- 167
+ FV+F DE E RA + G P+R+ P+ F S
Sbjct: 197 RTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSGGQQFSKTSYQNPQGA 256
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAM- 225
++E + + TI+ N+D VT ++ F GE+ +++ +G R FV+FA
Sbjct: 257 QNENDPNNTTIFVGNLDANVTDEHLRQVF-GQYGELVHVKIPVG-----KRCGFVQFADR 310
Query: 226 --AESAIAALNCSGAVLGSLPIRVSPSKTP 253
AE A+ LN G +G IR+S ++P
Sbjct: 311 NCAEEALRVLN--GTQIGGQNIRLSWGRSP 338
>gi|71033649|ref|XP_766466.1| polyadenylate binding protein [Theileria parva strain Muguga]
gi|68353423|gb|EAN34183.1| polyadenylate binding protein, putative [Theileria parva]
Length = 661
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 24/178 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 135
++YV D+ VTE L +F T G V R+C D SV R +A+V + + A+ AL
Sbjct: 28 SLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRD--SVTRKSLGYAYVNYYSTQDAQEAL 85
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
L + ++ P++ + +P+ R + I+ N+DK + D K
Sbjct: 86 E----NLNYIEIKGHPTRIMWSNRDPSL-------RRSGAGNIFVKNLDKSI---DTKSL 131
Query: 196 FESVC--GEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
+++ G + ++ D S R FV + ESA A+ +G ++G + V+P
Sbjct: 132 YDTFSHFGPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAP 189
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEE 129
AQ+D+ + +Y+ ++D +E L LF G + ++ D N+ R F FV FT+ +
Sbjct: 298 AQEDKRVTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQ 357
Query: 130 GARAALS 136
A A++
Sbjct: 358 EATKAIA 364
>gi|327351492|gb|EGE80349.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 1373
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ E + LF G+VVD R N+ RF +V+F A AA L
Sbjct: 944 TLFVTNFPPTADEAYVRDLFTPYGEVVDIRFPSLKYNTHRRFCYVQFQTASAAHAATELN 1003
Query: 139 GTMLGFYPVRVLPSKTAIAPV-----NPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDI 192
GT ++ +++ P+ +PT R + M R I+ +N+D K T+ D+
Sbjct: 1004 GTQQEVSGNSMVSAESTKLPLVVKISDPT--KRQDRTGPMEEGREIHVSNLDWKATEDDL 1061
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
F + GEV+ R+ +++ FV F +SA AAL + S P+ V S
Sbjct: 1062 VELF-TAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAMHEQLFRSRPLNVHIST 1120
Query: 252 -TPVRPRA 258
TP + +A
Sbjct: 1121 PTPAKRQA 1128
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 137
R ++VS++D + TE+ L LF G+V RI N + F FV F ++ A AAL++
Sbjct: 1045 REIHVSNLDWKATEDDLVELFTAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAM 1104
Query: 138 AGTMLGFYPVRV 149
+ P+ V
Sbjct: 1105 HEQLFRSRPLNV 1116
>gi|66819971|ref|XP_643642.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60471524|gb|EAL69480.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 299
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 27/191 (14%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFT 126
+SN + D+ ++ V+V + VTE L F CG + + +I +P V AF+ F
Sbjct: 67 SSNTKTDDDLK--VFVGQLPSGVTEYDLKEYFSECGDISNIKILNSNPQRVA--AFITFA 122
Query: 127 DEEGARAALSLAGTML---GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 183
DE+G A++ G G + SK + PT TI C NI
Sbjct: 123 DEKGRDTAITYNGKDFNGQGSLRINGANSKPSDGEGEPT--------------TIVCRNI 168
Query: 184 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVEFAMAESAIAALNCSGAVL 240
V + +K FF S CG + R+ L Y+ S R+ AFV F ++ A+ +G
Sbjct: 169 AFTVDETLVKEFF-SKCGSISRVSLPV-YEDSGRLKGFAFVSFDSEDAVEKAIALTGTKF 226
Query: 241 GSLPIRVSPSK 251
I+V S+
Sbjct: 227 EGREIQVERSQ 237
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +YV +D +VTEE L +F T G V + +I D NS + F+E+ D A R
Sbjct: 82 EPNKRALYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSKGYNYGFIEYDDPGAAER 141
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
A +L G + +RV + + +S E I+ ++ +V +
Sbjct: 142 AMQTLNGRRIHQAEIRVNWAYQSN---------QSSKEDTTNHFHIFVGDLSNEVNDEVL 192
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
F S G V R++ D + +AF + A AE A+++++ G LGS IR
Sbjct: 193 MQAF-STFGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMD--GEWLGSRAIR 248
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLR-- 119
R+N ++ ++D+ T++V D+ VT+ L F + V ++ D ++
Sbjct: 166 RLNWASAGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKG 225
Query: 120 FAFVEFTD-EEGARAALSLAGTMLGFYPVRVLP--SKTAIAPVNPTFLPRS---EDEREM 173
+ FV+F D E ARA + G P+R+ P S+ V +P S + E +
Sbjct: 226 YGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTGGVVQERVPNSQGAQSENDP 285
Query: 174 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA- 232
+ TI+ +D VT+ +K F S GEV +++ R FV+F SA A
Sbjct: 286 NNTTIFVGGLDPNVTEDTLKQVF-SPYGEVVHVKI----PVGKRCGFVQFVTRPSAEQAL 340
Query: 233 LNCSGAVLGSLPIRVS 248
L GA++G+ +R+S
Sbjct: 341 LMLQGALIGAQNVRLS 356
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 131
DEV RT+++ D+ + E + FL+ G+V + ++ D NS + + FVEFT +
Sbjct: 89 DEV--RTLWIGDLQYWMDESYVLGCFLSTGEVQNVKLIRDKNSGQLQGYGFVEFT----S 142
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
RAA A +L Y +++P+ +N + E + TI+ ++ VT
Sbjct: 143 RAA---AERVLQTYNGQMMPNVELTFRLN--WASAGEKRDDTPDYTIFVGDLAADVTDYL 197
Query: 192 IKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM-AESAIAALNCSGAVLGSLPIRVS 248
++ F V+ +++ D + FV+F E A A +G S P+R+
Sbjct: 198 LQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIG 257
Query: 249 PSKT 252
P+ +
Sbjct: 258 PAAS 261
>gi|255586946|ref|XP_002534073.1| RNA-binding protein, putative [Ricinus communis]
gi|223525900|gb|EEF28317.1| RNA-binding protein, putative [Ricinus communis]
Length = 779
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEG 130
E RT++V +I+ V + +L +LF G + C+ G F + + D
Sbjct: 152 EHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRG-------FVMISYYDIRD 204
Query: 131 ARAALSLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
ARAA+ L P+R L +I NP+ E+++ T+ N+D V+
Sbjct: 205 ARAAM----RGLQNKPLRRRKLDIHFSIPKDNPS-------EKDINQGTLVVFNLDASVS 253
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
D++ F GEV+ +R +H I F + AE+A+ ALN S + I++
Sbjct: 254 NDDLRQIF-GAYGEVKEIRETPHKRHHKFIEFYDVRSAEAALRALNRSD--IAGKRIKLE 310
Query: 249 PSK 251
PS+
Sbjct: 311 PSR 313
>gi|45360881|ref|NP_989116.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|38512254|gb|AAH61357.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|89268695|emb|CAJ83013.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
Length = 388
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRVNKAS-------------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|294884876|gb|ADF47446.1| TIA1-like protein, partial [Dugesia japonica]
Length = 443
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 138
+T+Y+S + VTEE L ++F G V C + NS A+VEF +E AR ALS+
Sbjct: 24 KTIYISCLPNSVTEEDLLSIFENYGLCVSCEL----NSEECTAYVEFDNETSARNALSMN 79
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
G +G ++++ + + E E +M S+ D TQ +F +
Sbjct: 80 GIEMGATRIQII--------IAYDYTSAFEQEYQMNSKNFLGKTDDSTPTQ----IFVGN 127
Query: 199 VCGEVQRLRLLGDYQHSTRI 218
+ V L G ++H +I
Sbjct: 128 IGSNVDEAILEGGFEHLGKI 147
>gi|296082474|emb|CBI21479.3| unnamed protein product [Vitis vinifera]
Length = 373
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 132
+V R ++V + T E L F GQ+ DC + D N+ + FV F +GA
Sbjct: 102 DVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAV 161
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL G + +++ +A + P+ P+S+D R IY +N+ V +
Sbjct: 162 KALKQPGKK-----INNRMTQSQLASMGPSPPPQSQD---TVGRKIYVSNVQADVDPERL 213
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA--ESAIAAL 233
+ FF GE++ + D Q F F ESA AL
Sbjct: 214 RSFFAKF-GEIETGPIGFDTQTGKSRGFALFVYKNQESARKAL 255
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ ++D+ + + L F G ++ C++ D N + FV F
Sbjct: 87 SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFE 146
Query: 127 DEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
+E A RA + G +L V V F R E E E+ +R +Y
Sbjct: 147 TQEAAERAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAKEFTNVYI 195
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
N ++ ++ F S G +R++ D +R FV F E A A++
Sbjct: 196 KNFGDEMDDEKLRELF-SKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVD 249
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ Q VTE L F G ++ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGQPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A+ +L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGML 162
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ ++D+ + + L F G ++ C++ D N + FV F
Sbjct: 87 SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFE 146
Query: 127 DEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
+E A RA + G +L V V F R E E E+ +R +Y
Sbjct: 147 TQEAAERAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAKEFTNVYI 195
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
N ++ ++ F S G +R++ D +R FV F E A A++
Sbjct: 196 KNFGDEMDDEKLRELF-SKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVD 249
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ Q VTE L F G ++ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGQPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A+ +L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGML 162
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFE 146
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCT 181
E A+ A+S ML + K + F R E E E+ +R IY
Sbjct: 147 THEAAQNAISTMNGML------LNDRKVFVG----HFKSRREREVELGARAMEFTNIYVK 196
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLL-GDYQHSTRIAFVEFAMAESA-IAALNCSG 237
N+ V + ++ F S G++ ++++ D HS FV F E A A +N +G
Sbjct: 197 NLHVDVDEQRLQDLF-SQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNMNG 253
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A++ +L
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQNAISTMNGML 162
>gi|209877643|ref|XP_002140263.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555869|gb|EEA05914.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 302
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 27/195 (13%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 138
++++ +I TEE + F +++ P + RF V+F G A+ L
Sbjct: 11 SIFIKNISPLATEESVCKAFEDLKNEILGVSFHVYPGTSQRFCQVDFKTSSGVTNAMGLN 70
Query: 139 GTMLGFYPVRVLPSKTAIAPV-------NPTFLPRSEDER------EMCSRTIYCTNIDK 185
G+ L P+ + T IAPV P P+S +R E SRTI NI +
Sbjct: 71 GSTLLGVPMSI----TVIAPVPIKLNMKYPKISPKSTTQRSANILEERLSRTILVENIPE 126
Query: 186 KVTQGDIKLFFESVCGEVQRL----RLLGDYQHSTRIAFVEFAMAESAIAA-LNCSGAVL 240
K TQ ++K+FF S G + + R +GD S R +EF E A VL
Sbjct: 127 KFTQNELKIFF-SNFGSILDISFEQRQIGD--ESLRCT-IEFENKEEANKVRRQNKDIVL 182
Query: 241 GSLPIRVSPSKTPVR 255
G +R+S K+ +R
Sbjct: 183 GDRVLRISTPKSMIR 197
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 140
++++ + TE+++ F CG+V RI AFV F E A AAL++ G
Sbjct: 251 IFIAGLPWSATEDEVKEHFAGCGEVTGARIPLQNGRSSGTAFVTFATSEAAEAALAMDGQ 310
Query: 141 MLG--FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
G + +R K DE+ +++ N+ V + ++ F
Sbjct: 311 DFGGRWMKIRTAEKKNMF------------DEKPEGCTSVFIGNLSWDVDENTVRETF-G 357
Query: 199 VCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSGAVLGSLPIRVSPSKT 252
CGE+ RL D + F V+FA E+ A+ +G+ + IRV+ +K+
Sbjct: 358 ECGEILSCRLATDRETGEFRGFGHVDFASTEAVDEAVKLAGSYVNGRAIRVNYAKS 413
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 55 NGYSQGKRRMNCRTSNAQQ--DEVIR--RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
+G G R M RT+ + DE +V++ ++ V E + F CG+++ CR+
Sbjct: 308 DGQDFGGRWMKIRTAEKKNMFDEKPEGCTSVFIGNLSWDVDENTVRETFGECGEILSCRL 367
Query: 111 CGD--PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKT 154
D F V+F E A+ LAG+ + +RV +K+
Sbjct: 368 ATDRETGEFRGFGHVDFASTEAVDEAVKLAGSYVNGRAIRVNYAKS 413
>gi|443926079|gb|ELU44821.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 593
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Query: 72 QQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFT 126
++D +R+T +++ ++D+ + + L F G V+ C++ D R + +V +
Sbjct: 230 RRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSCKVATDETGKSRGYGYVHYE 289
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE--DEREMCSRTIYCTNID 184
E A AA+ ML L K + + R DE IY N+D
Sbjct: 290 TAESAEAAIKAVNRML-------LNDKQVFVGHHISRKERQSQIDEARAQFTNIYVKNLD 342
Query: 185 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
+T+ + ++ FE G + L D + +R FV + E A A+N
Sbjct: 343 TDITEAEFRVMFEEF-GNITSAVLQTDNEGKSRGFGFVNYENHEEAERAVN 392
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 17/175 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA--FVEFTDEEGARAALS 136
+++YV D++ VT+ QL F GQV+ R+C D F +V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYE-FQPGGQVMSVRVCRDIRLGRSFGKPYVNFNNPVDAARALE 97
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L L F P+ P + + +P+ R S I+ N+DK + + F
Sbjct: 98 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 146
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 249
S G + ++ D S FV++ E+A +A+ +G ++ P+ V P
Sbjct: 147 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGP 200
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 61 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 120
KRR +A D+ +Y+ ++D + ++QL LF G++ C+I D N V +
Sbjct: 303 KRRFEQSMKDAA-DKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKG 361
Query: 121 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 362 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAM 404
>gi|378732360|gb|EHY58819.1| nucleolin, variant [Exophiala dermatitidis NIH/UT8656]
gi|378732361|gb|EHY58820.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 1283
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T+YV++ E + L G++++ R N RF +VEF + A+AA L
Sbjct: 916 TLYVTNYPAAADETWIRNLLRPYGEIINIRFPSLQRNKRRRFCYVEFKLPKEAQAATELD 975
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
G + + V S A PR+E + + RT++ + K T DI+ F S
Sbjct: 976 GKEIEGLNIVVKISNPAAR------QPRAEKKND--GRTVFVGQLPFKATTEDIEKSF-S 1026
Query: 199 VCGEVQRLRLLGDYQHSTR---IAFVEFAMAESAIAALNCSG 237
G++ +RL D ++ +R IAF+ FA E A AAL G
Sbjct: 1027 RYGKLDHIRLPHDPKNKSRNRGIAFITFARQEEAEAALAMDG 1068
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 28/183 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 139
+V V ++ +TE ++ F +CG V + ++ D SV+ VEF D + A ALS G
Sbjct: 844 SVLVQNLPSNITETKIRQYFSSCGIVKNLKLLPDEKSVV----VEFEDADAATYALSRDG 899
Query: 140 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 199
L + V+ +N T+Y TN + I+
Sbjct: 900 RELEGSVISVV--------LN-------------TGSTLYVTNYPAAADETWIRNLLRPY 938
Query: 200 CGEVQRLRLLG-DYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR-PR 257
GE+ +R R +VEF + + A AA G + L I V S R PR
Sbjct: 939 -GEIINIRFPSLQRNKRRRFCYVEFKLPKEAQAATELDGKEIEGLNIVVKISNPAARQPR 997
Query: 258 APR 260
A +
Sbjct: 998 AEK 1000
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 27/179 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 137
T+YV +D +VTE L LF+ G VV+ + D + + + FVEF EE A A+ +
Sbjct: 14 TIYVGGLDDKVTETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV + ++ I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIRVNKASAHQKSLD-------------VGANIFIGNLDLEV---DEKLL 116
Query: 196 FE--SVCGEV-QRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
++ S G + Q +++ D + +S AF+ FA E++ AA++ +G L + PI VS
Sbjct: 117 YDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVS 175
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 164 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 221
L + ++E + T+ N+D K + DI FF V G+V+ ++ + D + S +A+V
Sbjct: 581 LQKEQEEAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYV 640
Query: 222 EFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
EF E+ + AL+ +G +L + PI++ S+ + RA + H
Sbjct: 641 EFYTQEAVVKALSANGYMLKNRPIKIQSSQAE-KNRAAKAAKH 682
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 131
E +R +YV +D +VTE+ L +F T G V +I D N L + FVE+ D A
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAA 147
Query: 132 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 189
RA +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 148 ERAMQTLNGRRVHQSEIR----------VNWAYQSNNANKEDTSNHFHIFVGDLSNEVND 197
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 244
++ L S G V R++ D + +AF E A AE A+++++ G LGS
Sbjct: 198 -EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 254
Query: 245 IR 246
IR
Sbjct: 255 IR 256
>gi|414875768|tpg|DAA52899.1| TPA: hypothetical protein ZEAMMB73_898845 [Zea mays]
Length = 34
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 232 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 2 ALNCSGMILGTLPVRVSPSKTPVKPRVNR 30
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 31/214 (14%)
Query: 56 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD-- 113
G S R M +S+++ + +I + Q +TEE+L +LF G++ C++ D
Sbjct: 486 GPSSSSRAMEGTSSDSKTNLIINY------LPQSMTEEELRSLFARVGKIQSCKLVRDRV 539
Query: 114 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFY-PVRVLPSKTAIAPVNPTFLPRSEDERE 172
L + F+++ A A+ L + G P + + K + A P S R+
Sbjct: 540 TGQSLGYGFIDYVHPRDAERAVCL---LNGLQCPPKTI--KVSYA------RPNSSSIRD 588
Query: 173 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAM---AE 227
+Y + K +TQ +++ F S G + R+L D T + F+ F M AE
Sbjct: 589 A---NLYINGLPKNMTQKELEHLF-SPYGHIITSRILTDKASGTSRGVGFIRFNMKSEAE 644
Query: 228 SAIAALNCSG--AVLGSLPIRVSPSKTPVRPRAP 259
AI ALN +L L +R + ++T V P+ P
Sbjct: 645 EAIKALNGQKPCGILEPLVVRFAHNQTQVTPQNP 678
>gi|356525630|ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL- 135
R +YV +I + VT E+LA + G V + D S RFAFV E A A +
Sbjct: 70 RRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIE 129
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
L GT +G V+V ++ ++ + L E E +Y N+ K VT +K F
Sbjct: 130 KLNGTEIGGREVKVNVTEKPLSTPDLPLLQAEESEFIDSPHKVYVGNLAKTVTTDTLKNF 189
Query: 196 FESVCGEV--QRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
F S G+V ++ + S+ FV F+ E AA++ + ++L IRV+
Sbjct: 190 F-SEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSLLEGQTIRVN 244
>gi|449664731|ref|XP_002156267.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Hydra
magnipapillata]
Length = 361
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 70 NAQQDEVIRR--TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 125
N+ +++ I+ T++V D+D +T+ +L F G++++ ++ D + F+ F
Sbjct: 60 NSMENKKIKASITIFVGDLDDDLTDSELRQAFEPFGEILNAKVVRDAATEKSKNYGFISF 119
Query: 126 TDEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR------TI 178
T++ A RA + G ML P+ KT A N P D ++ T+
Sbjct: 120 TNKPDAERAIRDMHGAMLKRRPI-----KTNWATRNQNSKPSQLDYDQVFKEVSESNCTV 174
Query: 179 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCS-- 236
Y TN+ +++ + FE CG++ + D ++ I F A A +AI N S
Sbjct: 175 YVTNLPDRISDEVLVKHFED-CGKIVGTPRVFDGKNFAFIRFESHAAATTAIVKGNGSEL 233
Query: 237 -GAVL 240
GA+L
Sbjct: 234 NGAIL 238
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGA-R 132
E +R +Y+ +DQ+VTEE L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 78 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 137
Query: 133 AALSLAGTMLGF---YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 188
A +L G + YP SK VN + + ++ + + I+ ++ +V
Sbjct: 138 AMQTLNGRRVHQSVPYPDTTRNSKEIR--VNWAYQSNTTNKEDTSNHFHIFVGDLSNEVN 195
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 243
+ F S G V R++ D + +AF + AE A+++++ G LGS
Sbjct: 196 DEVLTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD--GEWLGSR 252
Query: 244 PIR 246
IR
Sbjct: 253 AIR 255
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 126 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAVDEHGNSKGY 185
Query: 121 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + + A A+ S+ G +L V V +P K ++ +E +
Sbjct: 186 GFVHYETSDAANQAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 236
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 234
IY NID + T + + FE G++ L D Q R FV F E A A++
Sbjct: 237 NIYVKNIDAETTDDEFRELFEKY-GQITSASLAHDDQGKVRGFGFVNFIRHEDAAKAVD 294
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + +G RA
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSAADGERALEE 115
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDAAIDNKALHDTF 163
Query: 197 ESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ + ++ +S FV + +++A A+ +L
Sbjct: 164 -AAFGNILSCKVAVDEHGNSKGYGFVHYETSDAANQAIKSVNGML 207
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 153 KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY 212
+ IAP P+ +++E + SR++Y N+D T ++++ F+S CG V R+ +L D
Sbjct: 29 EAGIAPGGPSVDAAAKEEAD--SRSVYVGNVDYSCTPEELQMHFQS-CGTVNRVTILTDK 85
Query: 213 QHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 254
+ + A++EF A++ A G+ L + I+VSP +T V
Sbjct: 86 MGNPKGFAYIEFLEADAVTNACLLDGSELRNRAIKVSPKRTNV 128
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI----CGDPNSVLRFAFVEFT 126
A ++E R+VYV ++D T E+L F +CG V I G+P FA++EF
Sbjct: 42 AAKEEADSRSVYVGNVDYSCTPEELQMHFQSCGTVNRVTILTDKMGNPKG---FAYIEFL 98
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAI 156
+ + A L G+ L ++V P +T +
Sbjct: 99 EADAVTNACLLDGSELRNRAIKVSPKRTNV 128
>gi|242011768|ref|XP_002426618.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
gi|212510771|gb|EEB13880.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
Length = 691
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 29/180 (16%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 137
T+YV +D +VTE + LF+ G VV+ + D + + + FVEF EE A A+ +
Sbjct: 14 TIYVGGLDDKVTEPLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P+RV + S ++ + I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIRVNKA--------------SAHQKNLDVGANIFIGNLDPEV---DEKL 115
Query: 195 FFESVCG-----EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
F++ + ++ D +S AF+ FA +++ A++ +G L + PI VS
Sbjct: 116 LFDTFSAFGVILQTPKIMRDPDSGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVS 175
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS-- 136
+YV ++ V E++L LF G + ++ D N R F FV F E A+ A+
Sbjct: 192 NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 137 ----LAGTMLGFYPVRVLPSKTAIAPVNPTFLP-RSEDEREMCSRTIYCTNIDKKVTQGD 191
++G +L Y R + + F + E + +Y N+D +
Sbjct: 252 NGKEVSGQLL--YVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+K F S G + +++ + HS FV F+ E A A+ +G ++G+ P+ V+
Sbjct: 310 LKEVF-STYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L +F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSH------------RDPGLRKSGMGNIFIKNLENSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ + S FV F E+A A+N +L
Sbjct: 117 DTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGML 162
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFE 146
Query: 127 DEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
E A+ A+S + G +L V V F E E E+ ++ + TNI
Sbjct: 147 TNEAAQQAISTMNGMLLNDRKVFV-----------GHFKSHREREAELGAQALAFTNIYV 195
Query: 186 KV------TQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN 234
K QG LFFE G++ ++++ D HS FV F E A A++
Sbjct: 196 KNLHVDMDEQGLQDLFFE--FGKMLSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVD 249
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ ++ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNVFIKNLEDSI---DSKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + ++ D S FV F E+A A++ +L
Sbjct: 117 DTFSTFGNILSCKVACDEHGSRGFGFVHFETNEAAQQAISTMNGML 162
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 52 QKRNGYSQGKRRMNCRTSNAQQDEVIRR---TVYVSDIDQQVTEEQLATLFLTCGQVVDC 108
QKR + + + R +QD R +YV ++D +++E+L T+F G +
Sbjct: 267 QKRG---ERQNELKRRFEQMKQDRQTRYQGVNLYVKNLDDSISDEKLRTVFSPYGVITSA 323
Query: 109 RICGDPNSVLRFAFVEFTD-EEGARAALSLAGTMLGFYPVRV 149
++ + F FV F+ EE +A + G ++G P+ V
Sbjct: 324 KVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLYV 365
>gi|225450219|ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
gi|297736206|emb|CBI24844.3| unnamed protein product [Vitis vinifera]
Length = 247
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 132
+V R +YV +I + + +LA + G V + D S RFAFV E A
Sbjct: 66 DVAARRLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDAN 125
Query: 133 AAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
AA+ L GT +G ++V ++ + ++ + L E + +Y N+ + VT
Sbjct: 126 AAIEKLNGTEIGGREIKVNITEKPLLTLDMSLLQAEESQFIDSPHKVYVGNLARTVTTDT 185
Query: 192 IKLFFESVCGEV--QRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+ FF G+V ++ + S+ FV F+ E AA+ +C+ A L IRV+
Sbjct: 186 LTQFFSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEEDVEAAISSCNNAFLDGQRIRVN 245
>gi|323452921|gb|EGB08794.1| hypothetical protein AURANDRAFT_63849 [Aureococcus anophagefferens]
Length = 322
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 17/191 (8%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQV--VDCRICGD-PNSVLRFAFVEFTDEE 129
D+ R YV + TE +++ F CG+V VD + D P AFV F DE+
Sbjct: 113 DDAYVRRAYVGGLPYSSTEASVSSYFANACGEVRRVDLKDFDDTPGKFCGIAFVTFGDED 172
Query: 130 GARAALSLAGTMLGFYP---VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
+ AL+L G+ ++V +TA P ER+ S T+Y N+
Sbjct: 173 ALQRALNLDGSAYEDDERCRLKVRRDQTANRRPPP--------ERKAGSLTVYAGNMGWD 224
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSGAVLGSLP 244
++ D+ +F V LR D F VEF S AAL C+G
Sbjct: 225 TSRDDVAAYFAEQGCAVANLRYHTDADTGNFRGFCHVEFEDEASLEAALACAGTKWRGRD 284
Query: 245 IRVSPSKTPVR 255
+R+S S+T +
Sbjct: 285 LRISHSETAKK 295
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 40 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 99
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 100 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 157
Query: 198 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 158 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 215
>gi|145531030|ref|XP_001451287.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418931|emb|CAK83890.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 136
+ V++S + +E + TLF CG+++ ++ D N +L + + F D + + AL+
Sbjct: 2 QQVFISGLPYTASENDVQTLFEECGEILSIKLPRYQDSNRLLGYGHITFNDSDAIQKALA 61
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L G+ LG + V +K P+ P C TI+ N+ + I F
Sbjct: 62 LNGSQLGGRYIDVKEAK-GTQSQKPSVPPPE------C-HTIFVKNLSYDLNADQIGDSF 113
Query: 197 ESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
CG+V +R++ Y T A+++F +S I AL +G + ++V
Sbjct: 114 RP-CGKVANVRMV--YNTVTDNFKGFAYIDFEDHQSVIKALQMNGKKVHGRQVQVD 166
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 24/180 (13%)
Query: 66 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 120
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 126 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGSSKGY 185
Query: 121 AFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 176
FV + +E A+ A+ ML Y +P K R EM +
Sbjct: 186 GFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 234
Query: 177 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
+Y NI +VT + + FE G+V + + +R FV F E+A A+
Sbjct: 235 FTNVYVKNISPEVTDDEFRELFER-HGDVTSSSIAREQDGKSRGFGFVNFTTHEAAAKAV 293
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 18/174 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE-EGARAALS 136
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 56 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 115
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 163
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+ G + ++ D S++ FV + E+A A+ + +G +L + V
Sbjct: 164 -AAFGNILSCKVAQDENGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVG 216
>gi|227206268|dbj|BAH57189.1| AT4G18120 [Arabidopsis thaliana]
Length = 629
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 134
RT++V +I+ V + +L LF G + C+ G F V + D +RAA
Sbjct: 36 RTLFVRNINSNVEDSELQALFEQYGHIRTLYTACKQRG-------FVMVSYNDIRASRAA 88
Query: 135 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
+ +L G +L R L +I NP+ E+++ T+ N+ V+ D++
Sbjct: 89 MRALQGKLL---KKRKLDIHFSIPKDNPS-------EKDVNQGTLVVFNLAPSVSNRDLE 138
Query: 194 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 234
F V GE++ +R + +H + F + A++A+ ALN
Sbjct: 139 NIF-GVYGEIKEIRETPNKRHHKFVEFFDVRSADAALKALN 178
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAM 225
SE + EM SR+++ N+D T +++ F S CG V R+ +L D + A+VEF
Sbjct: 73 SEAKEEMDSRSVFVGNVDYACTPEEVQQHFNS-CGTVNRVTILTDKFGQPKGFAYVEFVE 131
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPV----RPRAPR 260
AE+ A+ S + L I+V+P +T V +PR R
Sbjct: 132 AEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGGR 170
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFV 123
N TS A++ E+ R+V+V ++D T E++ F +CG V I D FA+V
Sbjct: 69 NATTSEAKE-EMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYV 127
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 156
EF + E + A+ L+ + L ++V P +T +
Sbjct: 128 EFVEAEAIQEAVKLSESELHGRQIKVAPKRTNV 160
>gi|444316030|ref|XP_004178672.1| hypothetical protein TBLA_0B03120 [Tetrapisispora blattae CBS 6284]
gi|387511712|emb|CCH59153.1| hypothetical protein TBLA_0B03120 [Tetrapisispora blattae CBS 6284]
Length = 439
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 78 RRTVYVSDIDQQV-TEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 136
+R + V +ID ++ TEE L T FL CG++ + RI N FAF+ F + E A A+
Sbjct: 204 KREILVRNIDNELATEEILKTYFLVCGEIQNIRIISPNNKSNSFAFIIFLNAESAEKAIK 263
Query: 137 LAGTML--GFYPVRVLPSKTAIAPVNPTFLPRSE 168
L + L G P+ + IA P +L R E
Sbjct: 264 LNNSYLKVGSNPISI-----TIAEQKP-YLERQE 291
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 8/136 (5%)
Query: 115 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 174
NS RF +V+ + A A+S F + K NP D
Sbjct: 150 NSKRRFCYVDVCSNKEALLAVS------RFNDKNIHGYKLVAKLSNPAMKQERSDSAIKE 203
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-- 232
R I NID ++ +I + VCGE+Q +R++ S AF+ F AESA A
Sbjct: 204 KREILVRNIDNELATEEILKTYFLVCGEIQNIRIISPNNKSNSFAFIIFLNAESAEKAIK 263
Query: 233 LNCSGAVLGSLPIRVS 248
LN S +GS PI ++
Sbjct: 264 LNNSYLKVGSNPISIT 279
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +YV +D +VTEE L +F T G V + +I D NS + FVE+ D A R
Sbjct: 85 EPNKRALYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPGAAER 144
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 145 AMQTLNGRRVHQAEIR----------VNWAYQSNTSNKEDTSNHFHIFVGDLSNEVND-E 193
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ L S G V R++ D + AF E AE A+++++ G LGS IR
Sbjct: 194 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMD--GEWLGSRAIR 251
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL--- 135
+YV ++ V E++L LF G + ++ D N R F FV F E A+ A+
Sbjct: 192 NIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHM 251
Query: 136 ---SLAGTMLGFYPVRVLPSKTAIAPVNPTFLP-RSEDEREMCSRTIYCTNIDKKVTQGD 191
++G +L Y R + + F + E + +Y N+D +
Sbjct: 252 NGKEVSGQLL--YVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
+K F S G + +++ + HS FV F+ E A A+ +G ++G+ P+ V+
Sbjct: 310 LKEVF-STYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L +F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSH------------RDPGLRKSGMGNIFIKNLENSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ + S FV F E+A A+N +L
Sbjct: 117 DTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGML 162
>gi|330793331|ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
gi|325085338|gb|EGC38747.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
Length = 565
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 77 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 134
I ++YV D+ +V+E+ L +F G V + R+C D N+ L +A+V + + A A
Sbjct: 8 ISSSLYVGDLLPEVSEQTLFEVFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNAADAERA 67
Query: 135 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
L L P+R P + + +P+ R+ ++ N+DK + D K
Sbjct: 68 LD----TLNNTPIRGKPCRIMWSQRDPSL-------RKSGVGNVFIKNLDKGI---DHKA 113
Query: 195 FFE--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPS 250
++ S G + +++ D +S++ FV + +SA A+ +G ++ + V P
Sbjct: 114 LYDTFSAFGNILSCKVVTDDNNSSKGFGFVHYESQDSADKAIAKVNGMMINGQKVFVGPF 173
Query: 251 KT 252
K+
Sbjct: 174 KS 175
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 56 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 112
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 113 SVRTSLALDESLFRGRQIKVIPKRT 137
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 52 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 110
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 111 KESVRTSLALDESLFRGRQIKVIPKRT 137
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 177 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 234
T+ N+D K + DI FF V G+V+ ++ + D + S +A+VEF +S I AL+
Sbjct: 319 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVIKALS 378
Query: 235 CSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 264
+G +L + PI+V S+ + RA + H
Sbjct: 379 VNGYMLKNRPIKVQSSQAE-KNRAAKATKH 407
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAM 225
+E + ++ +R++Y N+D T +++ F++ CG V R+ +L D + A+VEF
Sbjct: 81 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 139
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 262
E+ ALN + + L I+VSP +T V RPP
Sbjct: 140 QEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPP 176
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 123
N T+ A++ +V R+VYV ++D T E++ F CG V I D + FA+V
Sbjct: 77 NASTAEAKE-QVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 135
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 156
EF ++E + AL+L + L ++V P +T +
Sbjct: 136 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 168
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 138 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 197
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 198 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 255
Query: 198 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 256 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 313
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGA-R 132
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 80 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 139
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 140 AMQTLNGRRVHQSEIR----------VNWAYQSNTSNKEDTSNHFHIFVGDLSNEVND-E 188
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ L S G V R++ D + +AF + AE A+++++ G LGS IR
Sbjct: 189 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD--GEWLGSRAIR 246
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%), Gaps = 42/228 (18%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 110
QK+NG SQ + A E R + V+ + Q +TEE++ +LF + G+V ++
Sbjct: 12 LQKQNGESQNT------AAAASGSETARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKL 65
Query: 111 CGDPNSV---------LRFAFVEFTDEEGARAALS-LAGTMLGFYPVRVL---PSKTAIA 157
D N + L + FV F + A A++ L G L ++V PS I
Sbjct: 66 VRDKNVIYPGQPKGQSLGYGFVNFHRSQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIK 125
Query: 158 PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS-- 215
N +Y + + K +TQ +++ F GE+ R+L +
Sbjct: 126 GAN-----------------LYISGLPKTITQEELETIFRP-YGEIITSRVLVQEGNDKP 167
Query: 216 TRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 260
+ F+ F AE AIAALN + + PI V S TP + A +
Sbjct: 168 KGVGFIRFDQRKEAERAIAALNGTTPKGLTDPITVKFSNTPGQNTAAK 215
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGA-R 132
E +R +YV +D +VTE+ L +F T G V +I D N+ + FVE+ D A R
Sbjct: 86 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNARGYNYGFVEYDDPGAAER 145
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 146 AMQTLNGRRVHQSEIR----------VNWAYQSNNANKEDTSNHFHIFVGDLSNEVND-E 194
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ L S G V R++ D + +AF E A AE A+++++ G LGS IR
Sbjct: 195 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRAIR 252
>gi|336261828|ref|XP_003345700.1| hypothetical protein SMAC_05857 [Sordaria macrospora k-hell]
gi|380090036|emb|CCC12119.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1154
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ + E+ + LF CG + R N+ RF +V F D A AA L
Sbjct: 751 TLFVTNYPPEADEQYIRDLFKHCGDIHSIRFPSLKYNTKRRFCYVSFRDRSFAAAATQLD 810
Query: 139 GTML--GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
G L G Y ++ S V ++ED R ++ N+ + ++ D++ F
Sbjct: 811 GKPLEGGKYKLQAKFSDPGHRQVRQG--AQAED------RELHVMNLPRAASEDDVEGLF 862
Query: 197 ESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPSKTPV 254
E G+V +RL + ST AFV E A A+ + G+ P++V SK P
Sbjct: 863 EK-AGKVVSVRLTRNMGGVSTGTAFVVMETKEQAAKAIEILDKVIFGNHPLKVEVSKPPT 921
Query: 255 R 255
R
Sbjct: 922 R 922
>gi|432882405|ref|XP_004074014.1| PREDICTED: splicing factor 3B subunit 4-like [Oryzias latipes]
Length = 344
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRVNKAS-------------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|334305801|sp|Q9SVV9.2|AML3_ARATH RecName: Full=Protein MEI2-like 3; Short=AML3; AltName:
Full=MEI2-like protein 3
Length = 759
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEG 130
E RT++V +I+ V + +L LF G + C+ G F V + D
Sbjct: 162 EHPSRTLFVRNINSNVEDSELQALFEQYGHIRTLYTACKQRG-------FVMVSYNDIRA 214
Query: 131 ARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 189
+RAA+ +L G +L R L +I NP+ E+++ T+ N+ V+
Sbjct: 215 SRAAMRALQGKLL---KKRKLDIHFSIPKDNPS-------EKDVNQGTLVVFNLAPSVSN 264
Query: 190 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 234
D++ F V GE++ +R + +H + F + A++A+ ALN
Sbjct: 265 RDLENIF-GVYGEIKEIRETPNKRHHKFVEFFDVRSADAALKALN 308
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 23/199 (11%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVL--R 119
R+N + D V +++V D+ +V++E L + F T V ++ DP + +
Sbjct: 80 RLNWGAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKG 139
Query: 120 FAFVEFTDEEGARAALSLAGTMLGFY----PVRVLPSKTAIA-------PVNPTFLPRSE 168
F FV F D+ A AL TM G Y P+RV + P++ T +
Sbjct: 140 FGFVRFGDKGEADQALQ---TMNGVYCSSRPMRVSVATDRTKTRGIMPPPISYTVVGTGN 196
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES 228
E E + T++ +D T+ D++ F V GE+ +++ FV++ ++
Sbjct: 197 TEEEGANTTVFIGGLDPSTTEDDLRARF-GVIGEIMSVKV----PPGRGCGFVQYVTKDA 251
Query: 229 AIAALN-CSGAVLGSLPIR 246
A A+N +GA++ + +R
Sbjct: 252 ADVAINQMNGALINGVKVR 270
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 51 FQKRNGYSQGKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 107
F+ R+G RR + N + + E +RTV+ + + TE + F G+V D
Sbjct: 176 FENRDG-----RRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 230
Query: 108 CRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK-----------T 154
R+ D NS ++EF D A++L+G +L PV V PS+ +
Sbjct: 231 VRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASS 290
Query: 155 AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ- 213
A V P R +Y N+ +T+ +++ FE G+++ ++L D +
Sbjct: 291 GAAVVGPYG---------AVDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMET 340
Query: 214 -HSTRIAFVEFAMAESAIAALNCSG 237
H FV+FA E A AA + +G
Sbjct: 341 GHCKGFGFVQFAHLEHAKAAQSLNG 365
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESA 229
E RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++EF A S
Sbjct: 198 ERDQRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSV 256
Query: 230 IAALNCSGAVLGSLPIRVSPSK 251
A+ SG +L P+ V PS+
Sbjct: 257 PMAIALSGQLLLGQPVMVKPSE 278
>gi|198425590|ref|XP_002119350.1| PREDICTED: similar to splicing factor 3b, subunit 4 [Ciona
intestinalis]
Length = 375
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V E L LFL G VV + D S + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVAEPLLWELFLQAGVVVSTHMPKDRISGSHQGYGFVEFLAEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV +K + S + ++ N+D ++ D KL
Sbjct: 74 L-NMIKLYGKPIRV--NKAS-----------SHQKNLDVGANLFIGNLDPEI---DEKLL 116
Query: 196 FESVCG-----EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
+++ + ++ D +S AF+ FA E++ AA+ +G L + PI +S
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFEASDAAMEAMNGQHLCNRPISIS 175
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 129
++D V+V D+ +V ++ LA F G + D R+ D NS + F+ F D+
Sbjct: 70 KEDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKT 129
Query: 130 GARAAL-SLAGTMLGFYPVRV-------------LPSKTAI-----APVNPTFLPRSED- 169
A A+ ++ G LG +RV P +T + AP+N P S +
Sbjct: 130 DAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMNFQGGPLSYES 189
Query: 170 ---EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 226
+ + T+Y N+ TQ D+ F+S+ G + +R+ D AFV+
Sbjct: 190 VVQQTPAYNTTVYVGNLVPYATQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTH 244
Query: 227 E-SAIAALNCSGAVLGSLPIRVSPSK 251
E +A+A + G ++ PI+ S K
Sbjct: 245 EHAAMAIVQLQGQMVHGRPIKCSWGK 270
>gi|170590788|ref|XP_001900153.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
gi|158592303|gb|EDP30903.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
Length = 375
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 31/168 (18%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
T+YV +D++VT+ L LF+ G VV + D +S F F+EF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 194
M+ Y P++V + S E+ M ++ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANVFVGNLDPEV---DEKL 115
Query: 195 FFESVCG-----EVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALN 234
F++ +V ++ + S AFV FA ++SAI A+N
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGXSKGFAFVNFASFEASDSAIEAMN 163
>gi|85090720|ref|XP_958552.1| hypothetical protein NCU09048 [Neurospora crassa OR74A]
gi|28919924|gb|EAA29316.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1105
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ + E+ + LF CG + R N+ RF +V F D A AA L
Sbjct: 703 TLFVTNYPPEADEQSIRDLFKQCGDIHSIRFPSLKYNTKRRFCYVSFRDRSAAAAATQLD 762
Query: 139 GTML--GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
G L G Y ++ S V +ERE+ + N+ + ++ D++ F
Sbjct: 763 GKPLEGGKYKLQAKLSDPGHRQVRQGA---QAEEREL-----HVNNLPRAASEEDVEGLF 814
Query: 197 ESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPSKTPV 254
+ G V +RL + ST AFV E A A+ + G+ P++V SK P
Sbjct: 815 QK-AGNVVSVRLTRNMAGVSTGTAFVVMETKEQAAKAIEILDKVIFGNHPLKVEVSKPPT 873
Query: 255 R 255
R
Sbjct: 874 R 874
>gi|170034902|ref|XP_001845311.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
gi|167876604|gb|EDS39987.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
Length = 542
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 25/177 (14%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSLA 138
V+ I + + E++L LF CG++ D R+ DP + +AFV FT + A A+
Sbjct: 181 VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMTGTNRGYAFVTFTSRDAACNAVR-- 238
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDIKLFFE 197
V + +P P DE+ M + +Y N+ + ++ +K FE
Sbjct: 239 ---------EVWGCDIIVDWADPQEEP---DEQTMSKVKVLYVRNLTQDTSEEKLKESFE 286
Query: 198 SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSKTP 253
+ G+V+R++ + DY AFV F + A+ A+ + G + I VS +K P
Sbjct: 287 AF-GKVERVKKIKDY------AFVHFEDRDHAVNAMKDLDGKDINGSAIEVSLAKPP 336
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGA 131
+E +RTV+VS + Q + E+ L+ LF G V++ R+ D + +VEF+ +E
Sbjct: 261 EESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVGYVEFSQKEMV 320
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 191
A++L+G++L + V +I P S SR IY I V +
Sbjct: 321 DKAIALSGSVLDGQQILV----HSIQPEKKVIKSNSTGSSGGESR-IYVGYIHLSVAEEQ 375
Query: 192 IKLFFESVCGEVQRLRLLGDYQHS----TRIAFVEFAMAESAIAAL 233
I++ F+ G++ + + H+ ++ AF++F ESA A+
Sbjct: 376 IRVIFQPY-GDIDFINI-----HTKPGISKYAFIQFKTQESAKRAI 415
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +AFV F
Sbjct: 87 SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFE 146
Query: 127 DEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
++ A RA + G +L V V F R E E E+ ++ +Y
Sbjct: 147 TQDAADRAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGAKAKEFTNVYI 195
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N ++ +K FE G+ ++++ D +R FV F E A A+
Sbjct: 196 KNFGDEMEDEQLKEMFEKY-GKTLSVKVMTDSSGKSRGFGFVSFEKHEDANKAV 248
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ +TE L F G V+ R+C D L +A+V F+ A AL
Sbjct: 12 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALDT 71
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
+ F V+ P + + +P+ R+ ++ N+DK + D K ++
Sbjct: 72 ----MNFDVVKGKPIRIMWSQRDPSL-------RKSGVGNVFIKNLDKSI---DNKALYD 117
Query: 198 --SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
S G + +++ D S AFV F ++A A+ +L
Sbjct: 118 TFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGML 162
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 56 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 112
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 113 SVRTSLALDESLFRGRQIKVIPKRT 137
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 52 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 110
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 111 KESVRTSLALDESLFRGRQIKVIPKRT 137
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 51 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 107
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 108 SVRTSLALDESLFRGRQIKVIPKRT 132
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 47 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 105
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 106 KESVRTSLALDESLFRGRQIKVIPKRT 132
>gi|348513245|ref|XP_003444153.1| PREDICTED: splicing factor 3B subunit 4-like [Oreochromis
niloticus]
Length = 401
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRVNKAS-------------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 51 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 107
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 108 SVRTSLALDESLFRGRQIKVIPKRT 132
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E+ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 47 EERMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 105
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 106 KESVRTSLALDESLFRGRQIKVIPKRT 132
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGA 131
+E RTV+ + Q++ L F + G+V D R+ C A+VEF D E
Sbjct: 164 EERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESV 223
Query: 132 RAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
AL L+G L P+ V + K + P +P+ + +Y ++ +T
Sbjct: 224 TLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG----QTGPMRLYVGSLHFNIT 279
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPI 245
+ ++ FE G++ ++L+ D + S F+ F A+ A AL +G L P+
Sbjct: 280 EDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPM 338
Query: 246 RVS 248
+V
Sbjct: 339 KVG 341
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 159 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHST 216
+N P D +RT++C + +++ D++ FF SV G+VQ +RL+ +
Sbjct: 157 INDELTPEERD-----ARTVFCMQLSQRIRARDLEEFFSSV-GKVQDVRLITCNKTRRFK 210
Query: 217 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
IA+VEF ES AL SG L +PI V ++
Sbjct: 211 GIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQ 245
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFT 126
++ E R++YV ++D T E+L F CG V I G P FA++EF+
Sbjct: 67 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 123
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKT 154
D+E R +L+L ++ ++V+P +T
Sbjct: 124 DKESVRTSLALDESLFRGRQIKVIPKRT 151
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 66 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 124
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 125 KESVRTSLALDESLFRGRQIKVIPKRT 151
>gi|390177486|ref|XP_003736390.1| GA30124 [Drosophila pseudoobscura pseudoobscura]
gi|388859063|gb|EIM52463.1| GA30124 [Drosophila pseudoobscura pseudoobscura]
Length = 464
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 84 SDIDQQVTE---EQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
SD+D Q E +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 105 SDLDCQYAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 164
Query: 138 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 188
G LG + R P+ A P ++ + T+YC I+ ++
Sbjct: 165 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 224
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 233
DI S G +Q +R+ D + AFV F+ E+A A+
Sbjct: 225 NEDILQKTFSPYGTIQEIRVFKDKGY----AFVRFSTKEAATHAI 265
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 72 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFT 126
++ E R++YV ++D T E+L F CG V I G P FA++EF+
Sbjct: 23 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 79
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKT 154
D+E R +L+L ++ ++V+P +T
Sbjct: 80 DKESVRTSLALDESLFRGRQIKVIPKRT 107
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 22 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 80
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 81 KESVRTSLALDESLFRGRQIKVIPKRT 107
>gi|224103159|ref|XP_002312948.1| predicted protein [Populus trichocarpa]
gi|222849356|gb|EEE86903.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 89 QVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSLAGTMLGFYP 146
+ E + F G+V D R+ D NS ++EF D A++L+G L P
Sbjct: 6 KADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQP 65
Query: 147 VRVLPSKTAIAPVNPTFLPRSED---EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 203
V V PS+ V T S +R +Y N+ +T+ ++ FE G V
Sbjct: 66 VMVKPSEAEKNLVQSTTAVASGGLIGPYTGGARRLYIGNLHFNITEDQLRQVFEPF-GAV 124
Query: 204 QRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAV-LGSLPIRVS 248
+ ++L D H FV+FA E A ALN +G V + PI+VS
Sbjct: 125 ELVQLPHDEGGHCKGFGFVQFARLEDARNALNLNGQVEIAGRPIKVS 171
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 40 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 96
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 97 SVRTSLALDESLFRGRQIKVIPKRT 121
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 36 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 94
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 95 KESVRTSLALDESLFRGRQIKVIPKRT 121
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 75 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 134
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 135 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 192
Query: 198 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 193 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 250
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAM 225
+E + ++ +R++Y N+D T +++ F++ CG V R+ +L D + A+VEF
Sbjct: 75 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 133
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 262
E+ ALN + + L I+VSP +T V RPP
Sbjct: 134 QEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPP 170
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 123
N T+ A++ +V R+VYV ++D T E++ F CG V I D + FA+V
Sbjct: 71 NASTAEAKE-QVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 156
EF ++E + AL+L + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 28/172 (16%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 131
D TVYV ++D QVTEE L LFL G V + + D ++ + FVEF +EE A
Sbjct: 24 DRNAEATVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDA 83
Query: 132 RAALSLAGTMLGF-YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 190
+ + + F P++V S D R+ ++ N+D +
Sbjct: 84 EYGIKILNMVKLFGKPIKVNKSVG--------------DRRDEVGANLFIGNLDPDI--- 126
Query: 191 DIKLFFESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 234
D KL +++ ++ R G + +A+ F +++AI A+N
Sbjct: 127 DEKLLYDTFSAFGVVINTPKIMRDPDNGASKGFGFVAYDSFEASDAAIEAMN 178
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAM 225
+E + ++ +R++Y N+D T +++ F++ CG V R+ +L D + A+VEF
Sbjct: 75 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 133
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 262
E+ ALN + + L I+VSP +T V RPP
Sbjct: 134 QEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPP 170
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 123
N T+ A+ ++V R+VYV ++D T E++ F CG V I D + FA+V
Sbjct: 71 NASTAEAK-EQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 156
EF ++E + AL+L + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 228 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 284
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 285 SVRTSLALDESLFRGRQIKVIPKRT 309
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E+ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 224 EERMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 282
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 283 KESVRTSLALDESLFRGRQIKVIPKRT 309
>gi|18026763|gb|AAL55607.1|AF196776_1 phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana]
Length = 597
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 125
T N ++D V+ +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 150 TDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITF 209
Query: 126 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 179
E+GA+ AL+ +G R L + + P+ +PR + EM +Y
Sbjct: 210 DTEDGAKRALAFDRAAMGD---RYLTIQQYVKTTTPS-IPRRKTSSGFAPEMVDGYNRVY 265
Query: 180 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVE 222
N+ T+ DI KLF + V V+ + + G+++ + F +
Sbjct: 266 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKD 311
>gi|354545437|emb|CCE42165.1| hypothetical protein CPAR2_807140 [Candida parapsilosis]
Length = 420
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 133
E + +YV ++ + +EEQ++ LF + ++ D N + +AF+EF D + A
Sbjct: 50 ETSNKILYVGNLPKSASEEQISELFSVSKPIKSIKLLNDKNKLGFNYAFIEFDDNQEADM 109
Query: 134 ALS-LAGTMLGFYPVRVLPS------KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
ALS L G +L +RV + ++ P +PT+ ++ ++ +
Sbjct: 110 ALSTLNGKLLNNCEIRVNWAYQSATIASSSTPEDPTY-------------NLFVGDLSSE 156
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSL 243
V +K F + ++ D Q S FV F+ E A AL +GA LG
Sbjct: 157 VNDEALKKAFNKF-DSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQTMNGAWLGGR 215
Query: 244 PIR 246
IR
Sbjct: 216 AIR 218
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 13/178 (7%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 136
RTV+ + Q++ L F + G+V D R+ C A+VEF D E AL
Sbjct: 11 RTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALG 70
Query: 137 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L+G L P+ V + K + P +P+ + +Y ++ +T+ ++
Sbjct: 71 LSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG----QTGPMRLYVGSLHFNITEDMLR 126
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
FE G++ ++L+ D + S F+ F A+ A AL +G L P++V
Sbjct: 127 GIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVG 183
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 172 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESA 229
E +RT++C + +++ D++ FF SV G+VQ +RL+ + IA+VEF ES
Sbjct: 7 ERDARTVFCMQLSQRIRARDLEEFFSSV-GKVQDVRLITCNKTRRFKGIAYVEFKDPESV 65
Query: 230 IAALNCSGAVLGSLPIRVSPSK 251
AL SG L +PI V ++
Sbjct: 66 TLALGLSGQKLLGVPIVVQHTQ 87
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 127
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF D
Sbjct: 182 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKD 238
Query: 128 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
EE A+ L G L P+ ++ ++ NP S ++ + +Y NI
Sbjct: 239 EESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANASGNQNSIPFHRLYVGNIHF 297
Query: 186 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 243
+T+ D++ FE GE+ ++L + +R FV+F A AL +G L
Sbjct: 298 SITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 356
Query: 244 PIRVS 248
PIRV
Sbjct: 357 PIRVG 361
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 61 KRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGD 113
++R+ +T Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 149 RKRVKSKTPEPQLTEDERDRRTVFVQQLAARLRTKELIQFFEKAGPVKEAQIVKDRVSGR 208
Query: 114 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV-----RVLPSKTAIAPVNPTFLPRSE 168
V +VEF +EE A+ + G L P+ ++ A P T S
Sbjct: 209 SKGV---GYVEFKNEESVPLAIQMTGQKLLGIPIIAQLTEAEKNRQARNPEASTSHHNS- 264
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAE 227
+ +Y NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 265 ----VPFHRLYVGNIHFSITEQDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQFRDPN 319
Query: 228 SAIAAL-NCSGAVLGSLPIRVS 248
A AL +G L PIRV
Sbjct: 320 QAREALEKMNGFDLAGRPIRVG 341
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGA 131
+E RTV+ + Q++ L F + G+V D R+ C A+VEF D E
Sbjct: 165 EERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESV 224
Query: 132 RAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 188
AL L+G L P+ V + K + P +P+ + +Y ++ +T
Sbjct: 225 TLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG----QTGPMRLYVGSLHFNIT 280
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPI 245
+ ++ FE G++ ++L+ D + S F+ F A+ A AL +G L P+
Sbjct: 281 EDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPM 339
Query: 246 RVS 248
+V
Sbjct: 340 KVG 342
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 159 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHST 216
+N P D +RT++C + +++ D++ FF SV G+VQ +RL+ +
Sbjct: 158 INDELTPEERD-----ARTVFCMQLSQRIRARDLEEFFSSV-GKVQDVRLITCNKTRRFK 211
Query: 217 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
IA+VEF ES AL SG L +PI V ++
Sbjct: 212 GIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQ 246
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 35/194 (18%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ + TE+ L F G V+ RIC D L +A+V F A+ AL +
Sbjct: 11 SLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALDT 70
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCTNIDKKVTQGD 191
+ ++ P+R++ S +R+ C R ++ N+D+ V D
Sbjct: 71 MNFDVIKGRPIRLMWS-----------------QRDACLRRSGIGNVFVKNLDRSV---D 110
Query: 192 IKLFFE--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
K +E S G++ +++ D Q S AFV F +A A+ +G V+ P+ V+
Sbjct: 111 NKTLYEHFSGFGKILSSKVMSDDQGSKGYAFVHFQSQSAANCAIEQMNGKVINDRPVFVA 170
Query: 249 PSKTPVRPRAPRPP 262
P K PR R
Sbjct: 171 PFK----PRKDREA 180
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +RR+ V+V ++D+ V + L F G+++ ++ D +AFV F
Sbjct: 86 SQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSGFGKILSSKVMSDDQGSKGYAFVHFQ 145
Query: 127 DEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYC 180
+ A A+ + G ++ PV V P F PR + E E+ SR +Y
Sbjct: 146 SQSAANCAIEQMNGKVINDRPVFVAP-----------FKPRKDREAELRSRASEFTNVYI 194
Query: 181 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 233
N + ++ F S G+ ++++ D ++ FV F E+A A+
Sbjct: 195 KNFGDDMDDERLQGVF-SRYGKTLSVKVMTDSSGKSKGFGFVSFESHEAAKRAV 247
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
V+V D+ ++ L F G++ + ++ DP ++ + FV F +E A A++ +
Sbjct: 136 VFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSKESAEKAIAGM 195
Query: 138 AGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDEREMCSR----TIYCTNIDKKVTQGDI 192
G ++G +R S+ + ++ DE +R ++Y N+ T+ D+
Sbjct: 196 NGQLIGRRQIRTNWASRKPASAEEAHTKEQTFDEVFNATRADNTSVYVGNVHSSTTEEDL 255
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI-AALNCSGAVLGSLPIRVSPSK 251
+ F S+ G + +R+ + AFV +A E+A A + +G + I+ S +
Sbjct: 256 REAFASI-GAISEVRIFKQQGY----AFVRYATKEAATRAIMQMNGKEINGQNIKCSWGR 310
Query: 252 TP 253
TP
Sbjct: 311 TP 312
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLR-- 119
R+N ++ ++D+ T++V D+ VT+ L F + V ++ D ++
Sbjct: 169 RLNWASAGEKRDDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKG 228
Query: 120 FAFVEFTD-EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS---EDEREMCS 175
+ FV+F D E ARA + G + P+R+ P+ A +P + + + + +
Sbjct: 229 YGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGVQSDSDPSN 288
Query: 176 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN- 234
TI+ +D VT +K F + G+V +++ R FV+FA SA AL
Sbjct: 289 TTIFVGGLDPSVTDDMLKQVF-TPYGDVVHVKI----PVGKRCGFVQFANRASADEALVL 343
Query: 235 CSGAVLGSLPIRVSPSKTPVRPRA 258
G ++G +R+S ++P +A
Sbjct: 344 LQGTLIGGQNVRLSWGRSPSNRQA 367
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 136
RT+++ D+ + E ++ F G++ ++ D + + + F+EFT GA L
Sbjct: 95 RTLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQ 154
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
Y ++P+ +N + E + TI+ ++ VT ++ F
Sbjct: 155 T-------YNGAMMPNVEQTYRLN--WASAGEKRDDTPDYTIFVGDLAADVTDYILQETF 205
Query: 197 ESVCGEVQRLRLLGDY--QHSTRIAFVEFAM-AESAIAALNCSGAVLGSLPIRVSPS 250
V+ +++ D S FV+F +E A A +G V S P+R+ P+
Sbjct: 206 RVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPA 262
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ V++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 87 SQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFE 146
Query: 127 DEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 185
E A+ A+ ++ G +L V V F R E E E+ +R + TNI
Sbjct: 147 THEAAQNAIRTMNGMLLNDRKVFV-----------GHFKSRREREAELGARALEFTNIYV 195
Query: 186 KVTQGDI------KLFFESVCGEVQRLRLL-GDYQHSTRIAFVEFAMAESAIAAL 233
K D+ LF S G++ ++++ D HS FV F E A A+
Sbjct: 196 KNLHVDVDERCLQDLF--SQFGKILSVKVMRDDSGHSRGFGFVNFEKHEDAQKAV 248
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 20/166 (12%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 136
++YV D+ VTE L F G ++ R+C D L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
+ ++ P+R++ S+ R R+ ++ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNVFIKNLEDSI---DNKALY 116
Query: 197 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ S G + +++ D S FV F E+A A+ +L
Sbjct: 117 DTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEAAQNAIRTMNGML 162
>gi|52694662|ref|NP_705947.3| splicing factor 3B subunit 4 [Danio rerio]
gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|45768679|gb|AAH67655.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|94733748|emb|CAK11461.1| splicing factor 3b, subunit 4 [Danio rerio]
Length = 400
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRVNKAS-------------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 24/183 (13%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 130
E +R +YV +D ++TE+ L +F T G VV +I D N L + FVE+ D
Sbjct: 83 EPNKRALYVGGLDPRITEDVLRQIFETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGT 142
Query: 131 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 188
A RA +L G + +R VN + ++ + + + I+ ++ +V
Sbjct: 143 AERAMQTLNGRRVHQSEIR----------VNWAYQSNNQPKEDTSNHFHIFVGDLSNEVN 192
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 243
++ L S G+V R++ D + +AF + AE A+++++ G LGS
Sbjct: 193 D-EVLLQAFSAFGQVSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMD--GEWLGSR 249
Query: 244 PIR 246
IR
Sbjct: 250 AIR 252
>gi|390359470|ref|XP_782936.3| PREDICTED: nucleolysin TIAR-like [Strongylocentrotus purpuratus]
Length = 430
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 68 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 125
T +++D V+V D+ Q++ +L LF G + D R+ DP + + FV F
Sbjct: 103 TQGSRKDTTHHHHVFVGDLVQEMKTAELRALFDKYGSITDARVVRDPETGKSRCYGFVSF 162
Query: 126 TDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-------- 176
EE A+ A+ + G +L YP + +T A PT + E + R
Sbjct: 163 EQEEDAQCAIKEMNGAILPQYP-GMKAIRTGWATRKPTSHKPPQIEAKDYERVLNETSPN 221
Query: 177 --TIYCTNIDKKVTQGDI--KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 232
T+Y + K + D+ K+F G +Q +R + AFV FA ESA A
Sbjct: 222 NCTVYVGGLQFKFSAEDLLRKVF--GPFGAIQEVRTFPE----KAFAFVRFANHESATNA 275
Query: 233 L 233
+
Sbjct: 276 I 276
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 63 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG--QVVDCRICGDPNSVLRF 120
RM C +++ RT+YV ++D++VTEE + LFL + C++ D + +
Sbjct: 15 RMMC------EEDAQPRTLYVGNLDRRVTEELVFQLFLQIAPSKTKSCKMIADHGNSDPY 68
Query: 121 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 179
FVEF D A AA+ ++ G + P++V + T + + T ++
Sbjct: 69 CFVEFYDSVTAEAAMVAMNGRTVFDKPIKVNWATTQGSRKDTTH-----------HHHVF 117
Query: 180 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAALN-CS 236
++ +++ +++ F+ G + R++ D + FV F E A A+ +
Sbjct: 118 VGDLVQEMKTAELRALFDKY-GSITDARVVRDPETGKSRCYGFVSFEQEEDAQCAIKEMN 176
Query: 237 GAVLGSLP----IRVSPSKTPVRPRAPRPP 262
GA+L P IR + +P + +PP
Sbjct: 177 GAILPQYPGMKAIRTGWATR--KPTSHKPP 204
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 40 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 96
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 97 SVRTSLALDESLFRGRQIKVIPKRT 121
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 36 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 94
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 95 KESVRTSLALDESLFRGRQIKVIPKRT 121
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 168 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 224
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 225 SVRTSLALDESLFRGRQIKVIPKRT 249
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 57 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYIEFSDKE 113
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 114 SVRTSLALDESLFRGRQIKVIPKRT 138
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 53 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKYTGHPKGFAYIEFSD 111
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 112 KESVRTSLALDESLFRGRQIKVIPKRT 138
>gi|217075899|gb|ACJ86309.1| unknown [Medicago truncatula]
Length = 379
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 134
RT++V +I+ V + +L TLF G + C+ G F + + D AR A
Sbjct: 198 RTLFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRG-------FVMISYYDIRAARTA 250
Query: 135 LSLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
+ L P+R L +I NP+ E+++ T+ N+D V+ D+
Sbjct: 251 M----RALQNKPLRRRKLDIHFSIPKDNPS-------EKDINQGTLVVFNLDPSVSNDDL 299
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
+ F GEV+ +R +H I F + A++A+ ALN S + I++ PS+
Sbjct: 300 RQIF-GAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSD--IAGKRIKLEPSR 355
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 182 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 239
Query: 198 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 240 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|66800585|ref|XP_629218.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
gi|60462622|gb|EAL60825.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
Length = 691
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA-RAALSL 137
+ V+ +I+ + TEE++ LF G + +I PN + AF+ F D A +A +L
Sbjct: 177 KIVWAGNINPESTEEEVRHLFSQFGYLQAIKII--PNK--QCAFITFADVNCAIQAQFNL 232
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCSRTIYCTNIDKKVTQGDI 192
GT+ P+++ K AP R + + E ++ ++ N++ V+ +
Sbjct: 233 NGTIFRGLPLKLGFGKVENAPQANFGGGRFDQYNKPHQEETPTKNLWLGNVNSNVSYELL 292
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
K F+ G V +R+L H AFV F ESA AA N +G ++ +P++++
Sbjct: 293 KQIFDQF-GNVDTIRIL----HGRGCAFVNFFTVESAAAARNGLNGTMVCGMPLKIN 344
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 164 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 220
Query: 130 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT--FLPRS 167
R +L+L ++ ++V+P +T ++ T PRS
Sbjct: 221 SVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRS 260
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 13/178 (7%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 136
RTV+ + Q++ L F + G+V D R+ C A+VEF D E AL
Sbjct: 171 RTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALG 230
Query: 137 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 193
L+G L P+ V + K + P +P+ + +Y ++ +T+ ++
Sbjct: 231 LSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKG----QTGPMRLYVGSLHFNITEDMLR 286
Query: 194 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
FE G++ ++L+ D + S F+ F A+ A AL +G L P++V
Sbjct: 287 GIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVG 343
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 151 PSKTAIAP--VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 208
P ++P +N P D +RT++C + +++ D++ FF SV G+VQ +RL
Sbjct: 149 PFGKGVSPLGINDELTPEERD-----ARTVFCMQLSQRIRARDLEDFFSSV-GKVQDVRL 202
Query: 209 L--GDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 251
+ + IA+VEF ES AL SG L +PI V ++
Sbjct: 203 ITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQ 247
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 123
N S A ++E R+V+V ++D T E++ F +CG V I D + FA+V
Sbjct: 79 NAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 138
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 139 EFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 180
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAE 227
++ E +R+++ N+D T +++ F+S CG V R+ +L D + A+VEF AE
Sbjct: 86 NKEEADARSVFVGNVDYACTPEEVQQHFQS-CGTVNRVTILTDKFGQPKGFAYVEFVEAE 144
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKTPV------RPR 257
+ AL + + L ++V P +T V RPR
Sbjct: 145 AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPR 180
>gi|297821731|ref|XP_002878748.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324587|gb|EFH55007.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAA 232
SR I+ TN++ + I +FF S CG V+ + ++ D +H AFV FA ES A
Sbjct: 441 SRIIHVTNVNYAAKKEAISMFFSSKCGAVENVTIVTDPVTRHPKGSAFVTFATKESVNQA 500
Query: 233 LNCSGAVLGSLPIRV 247
+ SG + S PI+V
Sbjct: 501 IALSGTMFYSRPIKV 515
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 69 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRF----AFV 123
S QQD R ++V++++ +E ++ F + CG V + I DP V R AFV
Sbjct: 432 SQYQQDVTESRIIHVTNVNYAAKKEAISMFFSSKCGAVENVTIVTDP--VTRHPKGSAFV 489
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRV 149
F +E A++L+GTM P++V
Sbjct: 490 TFATKESVNQAIALSGTMFYSRPIKV 515
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 19/163 (11%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA-LSLA 138
+YV ++D + L +LF G ++ C++ + + FV+F E+ A AA +L
Sbjct: 108 NLYVKNLDASIDSAGLQSLFSKFGTILSCKVVEEHGKSKGYGFVQFDSEDSALAARTALH 167
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCSRTIYCTNIDKKVTQGDIK 193
TML + V F+ +SE E+ +Y N+ K +TQ
Sbjct: 168 DTMLKEKKLYV-----------SRFVKKSERTTATSYDELKFTNLYVKNLSKDMTQDAFH 216
Query: 194 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC 235
F S GE+ ++ D+ +R FV+F E A A++
Sbjct: 217 NMF-SAFGEIISAVIMQDHNGKSRGFGFVDFESPEDAKKAVDA 258
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAAL 135
R ++YV D+D +VTE L T+F + G + + + C L + +V F A AL
Sbjct: 18 RLSLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYRPYDAYKAL 77
Query: 136 S-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 194
S L T L +R++ + R+ R+ +Y N+D + ++
Sbjct: 78 SNLNHTYLKGKLMRIM------------WCQRNPCARKSGIGNLYVKNLDASIDSAGLQS 125
Query: 195 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 232
F S G + +++ ++ S FV+F +SA+AA
Sbjct: 126 LF-SKFGTILSCKVVEEHGKSKGYGFVQFDSEDSALAA 162
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Query: 45 CLFNTAFQKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 104
L +T +++ Y + + RT+ DE+ +YV ++ + +T++ +F G+
Sbjct: 165 ALHDTMLKEKKLYVSRFVKKSERTTATSYDELKFTNLYVKNLSKDMTQDAFHNMFSAFGE 224
Query: 105 VVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPT 162
++ I D N R F FV+F E A+ A+ +L G L R L A A
Sbjct: 225 IISAVIMQDHNGKSRGFGFVDFESPEDAKKAVDALNGYQL---ESRTLFVGRAQAKAERK 281
Query: 163 FLPRSEDE-------REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG-DYQH 214
+ + E + + + +Y N+ + ++ F S G++ +++ D
Sbjct: 282 KILQHEYKDIFNTHMEKFKASNLYVKNLALCIDNDKLQELF-SCSGKIVSAKVMRYDNGA 340
Query: 215 STRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 248
S FV F+ E A ALN +GAV + V+
Sbjct: 341 SRGFGFVCFSSPEEAKKALNALNGAVFQGKSLYVA 375
>gi|302811197|ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
gi|302815025|ref|XP_002989195.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300143095|gb|EFJ09789.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300144923|gb|EFJ11603.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
Length = 567
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 16/173 (9%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSLA 138
+YV D+D V E Q+ +F G V+ R+C D L +A+V + + + A A+
Sbjct: 17 LYVGDLDPSVNEAQIFDIFKQIGNVMSVRLCRDMVTKRSLGYAYVNYNNTQDASRAIE-- 74
Query: 139 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 198
L F PV P + + +P+ R+ S ++ N+DK + + F S
Sbjct: 75 --ELNFMPVNGKPVRIMFSYRDPSI-------RKSGSGNLFVKNLDKSIDNKALHDLF-S 124
Query: 199 VCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 249
G++ ++ D + S FV+F ++A A+ +G L + V P
Sbjct: 125 PYGKILSCKIALDVSNVSKGHGFVQFDTEDAAHTAIEKINGTTLHDKQLFVGP 177
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 43 VLCLFNTAFQKRNGYSQGKRRMNCRTSNAQQD-EVIRR--------TVYVSDIDQQVTEE 93
V L T FQ + Y ++ N R + + E R+ +Y+ ++D + +E
Sbjct: 249 VEDLHGTTFQDKELYVSRAQKKNEREAELKAKFEHERKDTEDKSPTNLYLKNLDDGIDDE 308
Query: 94 QLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGA-RAALSLAGTMLGFYPVRV 149
+L +F G V C++ DP FV F+ + A RA + G M+G P+ V
Sbjct: 309 KLKDMFSAFGNVTSCKVMRDPLGHSKGSGFVAFSTSDAALRAVAQMNGKMIGSKPLYV 366
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 164 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 220
Query: 130 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT--FLPRS 167
R +L+L ++ ++V+P +T ++ T PRS
Sbjct: 221 SVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRS 260
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 197 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 240
+ G + ++ D Y +S FV + AE+A A+ +L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGML 210
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 135
+YV +++Q VT+E+ LF G++ + D + F FV F+D E A AA+
Sbjct: 240 NIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAV 297
>gi|301789695|ref|XP_002930273.1| PREDICTED: splicing factor 3B subunit 4-like, partial [Ailuropoda
melanoleuca]
Length = 252
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 138 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
M+ Y P+RV + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRVNKAS-------------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 196 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 247
+++ ++ R G+ + I F F +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 248 S 248
S
Sbjct: 175 S 175
>gi|336466895|gb|EGO55059.1| hypothetical protein NEUTE1DRAFT_123594 [Neurospora tetrasperma
FGSC 2508]
gi|350288499|gb|EGZ69735.1| hypothetical protein NEUTE2DRAFT_116479 [Neurospora tetrasperma
FGSC 2509]
Length = 1103
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 138
T++V++ + E+ + LF CG + R N+ RF +V F D A AA L
Sbjct: 703 TLFVTNYPPEADEQSIRDLFKHCGDIHSIRFPSLKYNTKRRFCYVSFRDRSAAAAATQLD 762
Query: 139 GTML--GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
G L G Y ++ S V +ERE+ + N+ + ++ D++ F
Sbjct: 763 GKPLEGGKYKLQAKLSDPGHRQVRQGA---QAEEREL-----HVNNLPRAASEEDVEGLF 814
Query: 197 ESVCGEVQRLRLLGDYQH-STRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPSKTPV 254
+ G V +RL + ST AFV E A A+ + G+ P++V SK P
Sbjct: 815 QK-AGNVVSVRLTRNMAGVSTGTAFVVMETKEQAAKAIEILDKVIFGNHPLKVEVSKPPT 873
Query: 255 R 255
R
Sbjct: 874 R 874
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 182 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 239
Query: 198 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 240 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|225438611|ref|XP_002276585.1| PREDICTED: DAZ-associated protein 1-like [Vitis vinifera]
Length = 396
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 132
+V R ++V + T E L F GQ+ DC + D N+ + FV F +GA
Sbjct: 88 DVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAV 147
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
AL G + +++ +A + P+ P+S+D R IY +N+ V +
Sbjct: 148 KALKQPGKK-----INNRMTQSQLASMGPSPPPQSQD---TVGRKIYVSNVQADVDPERL 199
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA--ESAIAAL 233
+ FF GE++ + D Q F F ESA AL
Sbjct: 200 RSFFAKF-GEIETGPIGFDTQTGKSRGFALFVYKNQESARKAL 241
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 168 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 224
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 225 SVRTSLALDESLFRGRQIKVIPKRT 249
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E+ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 164 EERMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 168 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 224
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 225 SVRTSLALDESLFRGRQIKVIPKRT 249
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 92 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 151
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 152 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEEDIKSVFE 209
Query: 198 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 210 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 267
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 132
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 82 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 141
Query: 133 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 191
A +L G + +R VN + + + + + I+ ++ +V
Sbjct: 142 AMQTLNGRRVHQSEIR----------VNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEV 191
Query: 192 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 246
+ F S G V R++ D + +AF + AE A+++++ G LGS IR
Sbjct: 192 LTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD--GEWLGSRAIR 248
>gi|326429915|gb|EGD75485.1| poly(A)-binding protein [Salpingoeca sp. ATCC 50818]
Length = 1688
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 82/194 (42%), Gaps = 37/194 (19%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 137
++YV D+ QV E +L LF + G V+ R+C D + L + +V F E A AA+
Sbjct: 249 SLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITHGSLGYGYVNFNKAEDAEAAMG- 307
Query: 138 AGTMLGFYP-----VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 192
L F+ +R++ + R +R R I T + T +
Sbjct: 308 ---QLNFHDLHGRHIRIMK------------VERDPKKRRSDPRNIVVTGLPADTTSVHL 352
Query: 193 KLFFESVCGEVQRLRLLGDYQHSTR---IAFVEF---AMAESAIAALNCSGAVLGSLPIR 246
+ FE G++ + + D HS R FV F +AE AIA N A G +R
Sbjct: 353 RDTFEQF-GKILSCKAVLD--HSGRCRGFGFVHFEDPKVAERAIAEANGKDAG-GDRKLR 408
Query: 247 VSPSKTPVRPRAPR 260
V+P K PR R
Sbjct: 409 VAPFK----PRKQR 418
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
++V + ++ VTEE L F CG V+D ++ D V R F FV F E A +A++
Sbjct: 608 NLFVKNFNENVTEEDLRKFFEECGHVIDVKVMRDMEGVSRCFGFVIFATREEAESAIA 665
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 182 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 239
Query: 198 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 240 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 23/189 (12%)
Query: 73 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 130
+DE RRTV+V + ++ L F G V + +I D +VEF +E+
Sbjct: 174 EDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEFKNEDS 233
Query: 131 ARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSRTIYCT 181
AL L G L P+ V ++ T +P +P +Y
Sbjct: 234 VTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTAAHPNSIP---------FHRLYVG 284
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAV 239
NI VT+ D++ FE GE++ ++L D +R FV++ A A AL +G
Sbjct: 285 NIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGFD 343
Query: 240 LGSLPIRVS 248
L PIRV
Sbjct: 344 LAGRPIRVG 352
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 166 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 222
Query: 130 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT--FLPRS 167
R +L+L ++ ++V+P +T ++ T PRS
Sbjct: 223 SVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRS 262
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 162 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 220
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 221 KESVRTSLALDESLFRGRQIKVIPKRT 247
>gi|300175323|emb|CBK20634.2| unnamed protein product [Blastocystis hominis]
Length = 385
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 53 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 112
KR ++ Q +V RTV+V+++ +EE + F G++V+ I
Sbjct: 227 KRENVETATQKKKMLREKKQDADVQHRTVFVNNLSFAASEEDVQERFQQYGEIVEVTIVR 286
Query: 113 DPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 171
+ + R F +VEF+ EE A +AL G ML + V S P N + E++
Sbjct: 287 NNHGKSRGFGYVEFSTEEAAESALVENGKMLKSRKMEVKKS----VPQNERKTEKQENQN 342
Query: 172 E-MCSRTIYCTNIDKKVTQGDIKLFFESVCGE 202
TI+ + + V++ + +FF V E
Sbjct: 343 TPPVVNTIFVSGLPSGVSEYEFSVFFSKVGSE 374
>gi|402218951|gb|EJT99026.1| hypothetical protein DACRYDRAFT_24111 [Dacryopinax sp. DJM-731 SS1]
Length = 1056
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 78 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 136
+R VYV+ + + V +E+L LF G V + R+ P+ + + F FVEF DE GA AALS
Sbjct: 805 KREVYVAGLARGVKKEELEKLFGEKGSVKEVRLALGPDGLCKGFGFVEFQDEVGAEAALS 864
Query: 137 LAGT 140
L T
Sbjct: 865 LNNT 868
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 81 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 137
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 138 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 197
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 182 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 239
Query: 198 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 253
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 240 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 123
N S A ++E R+V+V ++D T E++ F +CG V I D + FA+V
Sbjct: 73 NSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 132
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 133 EFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 174
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAE 227
++ E SR+++ N+D T +++ F+S CG V R+ +L D + A+VEF AE
Sbjct: 80 NKEEADSRSVFVGNVDYACTPEEVQQHFQS-CGTVNRVTILTDKFGQPKGFAYVEFVEAE 138
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKTPV------RPR 257
+ AL + + L ++V P +T V RPR
Sbjct: 139 AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPR 174
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 59 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGD 113
Q +RR + + + ++E RRTV+V+ + ++T +L F G Q+V R+ G
Sbjct: 199 QSRRRES--SPHYSEEERDRRTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTGR 256
Query: 114 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 173
V A+VEF E+ + AL+L+G + PV V + A N SE R +
Sbjct: 257 SKGV---AYVEFRREDSVQVALTLSGKRILGIPVIV---QLTEAEKNRKARELSEQNRAL 310
Query: 174 CSRTIY----CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 223
+ + NI +T D+K FE GE++ +RL D Q+ ++ F++F
Sbjct: 311 SAELPFHRLCVGNIHFNITDEDLKAIFEPF-GELEYVRLQRDDQNRSKGFGFIQF 364
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 167 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG----EVQRLRLLGDYQHSTRIAFVE 222
SE+ER+ RT++ T + ++T +++ FFE ++ R R+ G S +A+VE
Sbjct: 210 SEEERDR--RTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTG---RSKGVAYVE 264
Query: 223 FAMAESAIAALNCSGAVLGSLPI 245
F +S AL SG + +P+
Sbjct: 265 FRREDSVQVALTLSGKRILGIPV 287
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 71 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 126
+Q+D +R++ +++ +++ + + L F T G ++ C++ D + F FV F
Sbjct: 62 SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFE 121
Query: 127 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
+ A+ A+S ML + K + F R E E E+ +R + TNI K
Sbjct: 122 THDAAQRAISTMNGML------LNDRKVFVG----HFKSRREREAELGARVMEFTNIYVK 171
Query: 187 VTQGDI------KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL 233
Q D+ LF S G++ ++++ D HS FV F E A A+
Sbjct: 172 NLQVDVDERGLQDLF--SQFGKMLSVKVMRDSSGHSRGFGFVNFEKHEEAQKAV 223
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 65 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 123
N S A ++E R+V+V ++D T E++ F +CG V I D + FA+V
Sbjct: 73 NSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 132
Query: 124 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 166
EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 133 EFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 174
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 169 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAE 227
++ E SR+++ N+D T +++ F+S CG V R+ +L D + A+VEF AE
Sbjct: 80 NKEEADSRSVFVGNVDYACTPEEVQQHFQS-CGTVNRVTILTDKFGQPKGFAYVEFVEAE 138
Query: 228 SAIAALNCSGAVLGSLPIRVSPSKTPV------RPR 257
+ AL + + L ++V P +T V RPR
Sbjct: 139 AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPR 174
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL- 135
RT++V ++D +T+E LATLF G V +I D L FAFVEF+D A AL
Sbjct: 38 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQ 97
Query: 136 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 195
S+ G L +RV A+ P P + E R ++ ++ ++ ++
Sbjct: 98 SMNGRQLLEREMRV---NWAVEPNQPGDRNKPETSRHFH---VFVGDLSAEIDSTKLREA 151
Query: 196 FESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
F GEV +++ D + FV + E A A+ +G LG IR +
Sbjct: 152 FLPF-GEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTN 206
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 136
RTV+V+++ ++ E + F G+V D RI D N+ A+VEF D++ AL
Sbjct: 135 RTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNTPKSKGMAYVEFADKKFIHPALE 194
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--------------TIYCTN 182
L G L + V KT+ A N + ++++ + +
Sbjct: 195 LTGQELNGQAIAV---KTSEAEKNIAWEAEQAQKKKLGASYGQGVPYIASAGPCKLRVGG 251
Query: 183 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST----RIAFVEFAMAESAIAALN-CSG 237
+ +++ D+K FE GE+ + ++ D AFV+F + + A+ AL+ +G
Sbjct: 252 LHLGLSEDDVKAVFEPF-GELDFISMIKDDDPGAAGKFASAFVQFKLTQHAMLALSQLNG 310
Query: 238 AVLGSLPIRVSPSKTPVRPRA 258
L +PIRVS + V+ A
Sbjct: 311 LELVGIPIRVSIASQGVQAAA 331
>gi|157128475|ref|XP_001661445.1| RNA-binding protein precursor, putative [Aedes aegypti]
gi|108872557|gb|EAT36782.1| AAEL011150-PA [Aedes aegypti]
Length = 285
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 83 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGT 140
V+ + Q +TE +L ++F T G + CRI D + F FV F E+ A+ A+
Sbjct: 92 VNYLPQDLTERELYSMFSTMGPIETCRIMRDVKTGYSYGFGFVNFLSEDAAQRAIRC--- 148
Query: 141 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 200
L Y VR K + A P+S+D +E +Y TN+ + +T + + F
Sbjct: 149 -LNGYSVRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITDEQLDIIFGKYG 198
Query: 201 GEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKTPVRP 256
VQ+ L R +AFV F A+ AI+ALN G+ P+ V ++ R
Sbjct: 199 TIVQKNILRDKLTGFPRGVAFVRFNKREEAQEAISALNNVIPQGGTQPLIVRVAEDHGRA 258
Query: 257 RA 258
+A
Sbjct: 259 KA 260
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 55 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD- 113
NGYS +R+ + Q D++ +Y++++ + +T+EQL +F G +V I D
Sbjct: 150 NGYSVRNKRLKVSYARPQSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQKNILRDK 209
Query: 114 ----PNSVLRFAFVEFTDEEGARAALS 136
P V AFV F E A+ A+S
Sbjct: 210 LTGFPRGV---AFVRFNKREEAQEAIS 233
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 80 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 136
++YV ++D VTE L LF + G V R+C D L +A+V F + E+G +A
Sbjct: 67 SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 126
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 196
L T++ P R++ S+ R R+M + ++ N+D + + F
Sbjct: 127 LNYTLIKGRPCRIMWSQ------------RDPSLRKMGTGNVFIKNLDPAIDNKALHDTF 174
Query: 197 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 248
S G++ ++ D + + FV F ESA AA+ + +G +L + V
Sbjct: 175 -SAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVG 227
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 71 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDE 128
A DE + T++V + V + L + F CG+VV R+ D N+ F +VEFT
Sbjct: 293 ASNDEAVT-TIFVGRLSWNVDNDWLKSEFEECGEVVSARVQMDRNTGKSRGFGYVEFTSP 351
Query: 129 EGARAALSLAGTMLGFYPVRVLPSKTAIA--PVNPTFLPRSEDEREMCSRTIYCTNIDKK 186
+ AAL L G + P+ V S T ++ V + D++ S T++ N+
Sbjct: 352 DAVEAALKLTGKEIDGRPINVDKS-TGVSKDKVRDSRAKAFGDQKSEPSSTLFVGNLSFS 410
Query: 187 VTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 234
++ + F S G+V+ +R+ D + A+V+F ESA A +
Sbjct: 411 ASEDVLWEAFASY-GDVKGVRMPTDRETGQPKGFAYVDFTDIESAKKAHD 459
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 168 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 224
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 225 SVRTSLALDESLFRGRQIKVIPKRT 249
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 150 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 206
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 207 SVRTSLALDESLFRGRQIKVIPKRT 231
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 146 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 204
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 205 KESVRTSLALDESLFRGRQIKVIPKRT 231
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 135 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 191
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 192 SVRTSLALDESLFRGRQIKVIPKRT 216
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 131 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 189
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 190 KESVRTSLALDESLFRGRQIKVIPKRT 216
>gi|145352361|ref|XP_001420518.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580752|gb|ABO98811.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 223
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 134
E +RRT +VS+ +T EQ+ LF CG + +CR G P F F+EF + A AA
Sbjct: 94 EELRRTAHVSNYPVGLTTEQVKQLFSFCGSIAECRE-GGPGK--NFCFIEFESNKEALAA 150
Query: 135 LSLAGTMLGFYPVRVLPSKT 154
+L G +G +RV +KT
Sbjct: 151 CALNGMQVGGRNLRVELAKT 170
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 74 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 131
+E V+V + V + L + F +CG+VV R+ D +S F +VEF D E +
Sbjct: 189 EEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEAS 248
Query: 132 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE---DEREMCSRTIYCTNIDKKVT 188
A+ G+ + +RV + T P N R++ D++ + T++ ++ VT
Sbjct: 249 AKAIEKDGSEIDGRAIRVNYA-TQRKP-NEAAEKRAKVFNDKQSPPAETLWIGSLSFSVT 306
Query: 189 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNC-SGAVLGSLPI 245
+ + F G+VQ +RL D F V+F+ E A AAL +GA + I
Sbjct: 307 EDQVYEAF-GQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRAI 365
Query: 246 RV 247
RV
Sbjct: 366 RV 367
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 159 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHST 216
V P R++D E + ++ + V +K FES CGEV R++ D Q S
Sbjct: 177 VAPAKKARADDGEEEATTNVFVGQLSWNVDNDWLKSEFES-CGEVVSARVVFDRDSQKSR 235
Query: 217 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 248
+VEFA E++ A+ G+ + IRV+
Sbjct: 236 GFGYVEFADLEASAKAIEKDGSEIDGRAIRVN 267
>gi|308807104|ref|XP_003080863.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116059324|emb|CAL55031.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 387
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 22/188 (11%)
Query: 79 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 136
RTV+V+++ ++ E + F G+V D RI D NS A+VEF+D + AL
Sbjct: 9 RTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNSTTSKGMAYVEFSDRKFIHPALE 68
Query: 137 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR---------------TIYCT 181
G L + V KT+ A N + ++++ + +
Sbjct: 69 CTGMELHGNAISV---KTSEAEKNIAWEAEQAQKKKLGAAYGAAVYGAGGGAGPCKLRVG 125
Query: 182 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN-CSGAVL 240
+ +++ DIK FE G++ + +L + AFV+F A+ AL+ +G L
Sbjct: 126 GLHLALSEDDIKAVFEPF-GQLDFISMLKEDDGKYASAFVQFRQTSQAMLALSQLNGLEL 184
Query: 241 GSLPIRVS 248
+PIRVS
Sbjct: 185 VGIPIRVS 192
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 175 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAA 232
+RT++ TN+ K+ + I FF V G+V +R++ D +T +A+VEF+ + A
Sbjct: 8 TRTVFVTNLSTKLDERGIFKFFSKV-GKVTDVRIIYDRNSTTSKGMAYVEFSDRKFIHPA 66
Query: 233 LNCSGAVLGSLPIRVSPSK 251
L C+G L I V S+
Sbjct: 67 LECTGMELHGNAISVKTSE 85
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 164 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 220
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 221 SVRTSLALDESLFRGRQIKVIPKRT 245
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 195 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 251
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 252 SVRTSLALDESLFRGRQIKVIPKRT 276
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 249
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 250 KESVRTSLALDESLFRGRQIKVIPKRT 276
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 137 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 193
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 194 SVRTSLALDESLFRGRQIKVIPKRT 218
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 133 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 191
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 192 KESVRTSLALDESLFRGRQIKVIPKRT 218
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 170 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 226
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 227 SVRTSLALDESLFRGRQIKVIPKRT 251
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 166 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 224
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 225 KESVRTSLALDESLFRGRQIKVIPKRT 251
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 75 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEE 129
E R++YV ++D T E+L F CG V I G P FA++EF+D+E
Sbjct: 195 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 251
Query: 130 GARAALSLAGTMLGFYPVRVLPSKT 154
R +L+L ++ ++V+P +T
Sbjct: 252 SVRTSLALDESLFRGRQIKVIPKRT 276
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 168 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 225
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 249
Query: 226 AESAIAALNCSGAVLGSLPIRVSPSKT 252
ES +L ++ I+V P +T
Sbjct: 250 KESVRTSLALDESLFRGRQIKVIPKRT 276
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,945,622,687
Number of Sequences: 23463169
Number of extensions: 151151559
Number of successful extensions: 507125
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 4859
Number of HSP's that attempted gapping in prelim test: 498647
Number of HSP's gapped (non-prelim): 10477
length of query: 264
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 124
effective length of database: 9,074,351,707
effective search space: 1125219611668
effective search space used: 1125219611668
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)