Query 024700
Match_columns 264
No_of_seqs 196 out of 1494
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 06:41:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024700.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024700hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13463 phosphatase PhoE; Pro 100.0 6E-39 1.3E-43 270.6 18.9 169 80-251 2-170 (203)
2 PRK15004 alpha-ribazole phosph 100.0 8.4E-39 1.8E-43 268.9 19.1 169 81-252 1-169 (199)
3 PRK14119 gpmA phosphoglyceromu 100.0 1.9E-38 4.1E-43 272.1 20.3 173 80-252 1-202 (228)
4 PRK14116 gpmA phosphoglyceromu 100.0 1.4E-38 3.1E-43 272.7 19.5 180 80-259 1-210 (228)
5 TIGR03162 ribazole_cobC alpha- 100.0 1.5E-37 3.3E-42 256.1 18.6 165 83-252 1-165 (177)
6 PRK03482 phosphoglycerate muta 100.0 2.5E-37 5.5E-42 262.8 20.2 169 80-251 1-169 (215)
7 PRK01295 phosphoglyceromutase; 100.0 3.8E-37 8.2E-42 260.1 21.0 172 80-252 2-178 (206)
8 PRK01112 phosphoglyceromutase; 100.0 3.6E-37 7.8E-42 263.8 20.2 177 80-258 1-208 (228)
9 PRK14118 gpmA phosphoglyceromu 100.0 3.5E-37 7.5E-42 264.0 19.7 179 81-259 1-209 (227)
10 PRK14117 gpmA phosphoglyceromu 100.0 3.5E-37 7.6E-42 264.4 19.5 172 80-252 1-202 (230)
11 COG0406 phoE Broad specificity 100.0 2.2E-36 4.7E-41 255.6 21.0 168 80-249 2-170 (208)
12 PRK14120 gpmA phosphoglyceromu 100.0 2.7E-36 5.8E-41 261.3 21.3 181 79-259 3-211 (249)
13 TIGR03848 MSMEG_4193 probable 100.0 2.5E-36 5.5E-41 254.7 18.9 164 82-250 1-170 (204)
14 TIGR01258 pgm_1 phosphoglycera 100.0 5.1E-36 1.1E-40 259.2 20.3 172 81-252 1-201 (245)
15 PRK14115 gpmA phosphoglyceromu 100.0 8.8E-36 1.9E-40 258.0 20.8 172 81-252 1-201 (247)
16 PRK13462 acid phosphatase; Pro 100.0 5.2E-36 1.1E-40 252.5 18.5 161 78-250 3-165 (203)
17 PRK07238 bifunctional RNase H/ 100.0 6.1E-35 1.3E-39 267.3 23.0 174 76-252 167-340 (372)
18 PF00300 His_Phos_1: Histidine 100.0 3E-34 6.6E-39 230.8 13.5 156 82-239 1-158 (158)
19 KOG0235 Phosphoglycerate mutas 100.0 2.9E-33 6.3E-38 233.6 16.6 172 79-250 4-182 (214)
20 smart00855 PGAM Phosphoglycera 100.0 1.8E-32 3.9E-37 221.3 15.1 151 82-239 1-155 (155)
21 PTZ00322 6-phosphofructo-2-kin 100.0 1.2E-31 2.5E-36 261.5 18.8 161 80-246 419-599 (664)
22 COG0588 GpmA Phosphoglycerate 100.0 1.4E-31 2.9E-36 219.8 12.8 170 80-249 1-199 (230)
23 PTZ00123 phosphoglycerate muta 100.0 7.3E-30 1.6E-34 219.9 18.4 167 93-259 1-197 (236)
24 PTZ00122 phosphoglycerate muta 99.9 4.2E-25 9.1E-30 195.9 15.0 143 81-250 103-258 (299)
25 cd07067 HP_PGM_like Histidine 99.9 5.2E-25 1.1E-29 176.9 14.2 124 82-250 1-125 (153)
26 cd07040 HP Histidine phosphata 99.9 4.1E-22 8.8E-27 159.3 14.6 120 82-249 1-124 (153)
27 KOG4754 Predicted phosphoglyce 99.9 4.7E-22 1E-26 163.0 13.8 167 78-246 12-202 (248)
28 KOG0234 Fructose-6-phosphate 2 99.8 2.6E-20 5.6E-25 168.7 12.6 163 78-249 237-400 (438)
29 TIGR00249 sixA phosphohistidin 99.8 2.6E-19 5.7E-24 144.2 15.7 120 81-246 1-122 (152)
30 PRK06193 hypothetical protein; 99.8 1.4E-19 3E-24 151.7 14.1 140 80-256 42-187 (206)
31 PRK10848 phosphohistidine phos 99.8 1.5E-18 3.2E-23 140.8 15.5 121 81-247 1-123 (159)
32 PRK15416 lipopolysaccharide co 99.8 9.4E-19 2E-23 145.6 14.4 128 78-253 52-180 (201)
33 KOG3734 Predicted phosphoglyce 99.8 2.1E-18 4.5E-23 148.4 13.6 169 79-249 11-219 (272)
34 COG2062 SixA Phosphohistidine 99.8 2.2E-18 4.7E-23 138.7 12.9 122 80-246 1-123 (163)
35 KOG4609 Predicted phosphoglyce 99.8 1.8E-18 3.9E-23 142.2 10.0 146 79-252 93-245 (284)
36 cd07061 HP_HAP_like Histidine 98.1 9.1E-06 2E-10 70.0 6.7 60 81-151 4-74 (242)
37 PF00328 His_Phos_2: Histidine 97.1 0.00097 2.1E-08 59.6 6.4 46 106-151 62-117 (347)
38 PRK10172 phosphoanhydride phos 95.4 0.14 3.1E-06 47.9 10.0 71 80-150 35-130 (436)
39 PRK10173 glucose-1-phosphatase 95.0 0.14 3E-06 47.8 8.8 70 81-150 33-128 (413)
40 KOG3720 Lysosomal & prostatic 94.9 0.12 2.6E-06 48.2 8.0 71 80-150 35-127 (411)
41 KOG1057 Arp2/3 complex-interac 93.3 0.29 6.2E-06 48.4 7.2 45 106-150 511-571 (1018)
42 KOG1382 Multiple inositol poly 84.4 4.5 9.7E-05 38.0 7.5 48 104-151 130-183 (467)
43 KOG3672 Histidine acid phospha 74.6 12 0.00026 34.6 6.8 42 107-148 169-224 (487)
44 COG2247 LytB Putative cell wal 71.9 29 0.00063 31.3 8.4 121 129-256 30-163 (337)
45 PF14606 Lipase_GDSL_3: GDSL-l 59.8 8.3 0.00018 31.8 2.6 30 204-233 73-102 (178)
46 PF12048 DUF3530: Protein of u 52.6 35 0.00077 30.5 5.7 44 205-249 174-217 (310)
47 PF01764 Lipase_3: Lipase (cla 45.3 82 0.0018 23.7 6.1 41 206-246 45-87 (140)
48 COG0761 lytB 4-Hydroxy-3-methy 35.6 26 0.00057 31.0 2.0 26 132-158 12-37 (294)
49 TIGR03729 acc_ester putative p 35.5 77 0.0017 26.8 5.0 38 201-238 141-178 (239)
50 PF04198 Sugar-bind: Putative 34.0 2.5E+02 0.0055 24.2 8.0 77 135-250 2-78 (255)
51 PRK04946 hypothetical protein; 32.9 1.7E+02 0.0036 24.2 6.2 48 200-249 101-151 (181)
52 PF07819 PGAP1: PGAP1-like pro 31.1 84 0.0018 26.6 4.4 33 201-233 56-93 (225)
53 COG2344 AT-rich DNA-binding pr 30.2 41 0.00088 28.1 2.2 36 210-245 70-105 (211)
54 PLN02517 phosphatidylcholine-s 29.8 1.2E+02 0.0025 30.1 5.4 43 192-234 179-222 (642)
55 PF02450 LCAT: Lecithin:choles 29.6 71 0.0015 29.5 4.0 40 203-243 98-140 (389)
56 PF05990 DUF900: Alpha/beta hy 29.0 1.2E+02 0.0026 25.9 5.0 46 200-245 68-113 (233)
57 COG0488 Uup ATPase components 29.0 59 0.0013 31.5 3.4 47 202-249 179-226 (530)
58 COG1136 SalX ABC-type antimicr 28.9 1.2E+02 0.0027 25.9 5.0 34 206-240 176-209 (226)
59 KOG2369 Lecithin:cholesterol a 28.8 1.1E+02 0.0024 29.1 5.0 45 200-244 157-201 (473)
60 COG1134 TagH ABC-type polysacc 28.5 98 0.0021 26.9 4.3 28 205-234 180-207 (249)
61 PRK00035 hemH ferrochelatase; 27.9 4.4E+02 0.0095 23.5 11.2 20 104-123 69-88 (333)
62 COG0549 ArcC Carbamate kinase 27.9 84 0.0018 28.0 3.9 32 203-234 20-51 (312)
63 cd00741 Lipase Lipase. Lipase 27.4 1.6E+02 0.0034 22.8 5.2 43 204-246 7-51 (153)
64 PF09370 TIM-br_sig_trns: TIM- 26.5 43 0.00093 29.4 1.8 37 200-238 190-226 (268)
65 TIGR00824 EIIA-man PTS system, 25.3 80 0.0017 23.7 2.9 22 226-247 3-27 (116)
66 COG0634 Hpt Hypoxanthine-guani 25.3 1.3E+02 0.0029 24.7 4.3 59 203-262 13-76 (178)
67 COG1117 PstB ABC-type phosphat 24.8 89 0.0019 26.9 3.3 27 208-237 185-211 (253)
68 PF03610 EIIA-man: PTS system 24.6 67 0.0014 23.9 2.4 21 226-246 1-24 (116)
69 cd00519 Lipase_3 Lipase (class 24.4 2.1E+02 0.0046 23.7 5.8 43 203-245 106-150 (229)
70 COG1116 TauB ABC-type nitrate/ 24.1 1.3E+02 0.0027 26.3 4.2 27 208-235 166-192 (248)
71 PF10116 Host_attach: Protein 23.8 2.9E+02 0.0064 21.1 6.0 42 204-245 71-112 (138)
72 PF13479 AAA_24: AAA domain 23.7 1.5E+02 0.0032 24.7 4.6 35 201-236 105-139 (213)
73 cd04256 AAK_P5CS_ProBA AAK_P5C 23.0 1.3E+02 0.0028 26.6 4.2 30 206-237 31-60 (284)
74 PRK09177 xanthine-guanine phos 22.6 2.6E+02 0.0056 22.2 5.6 47 202-248 10-57 (156)
75 KOG0062 ATPase component of AB 21.3 1.5E+02 0.0032 28.9 4.4 41 202-243 224-265 (582)
76 COG4598 HisP ABC-type histidin 20.4 1.6E+02 0.0035 24.8 3.9 116 104-234 77-212 (256)
77 COG1416 Uncharacterized conser 20.2 2.3E+02 0.0051 21.4 4.4 41 206-246 14-54 (112)
78 PLN02162 triacylglycerol lipas 20.1 2.3E+02 0.005 27.1 5.4 35 208-242 261-297 (475)
No 1
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=6e-39 Score=270.58 Aligned_cols=169 Identities=29% Similarity=0.438 Sum_probs=156.6
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCccEEECC
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDP 159 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~ 159 (264)
+++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.| ...+++.|||||+.||+|||+.+++..+ .++.+++
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~G~~d~~Lt~~G~~Qa~~~~~~l-~~~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~~~~~~ 79 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQGRKNSALTENGILQAKQLGERM-KDLSIHAIYSSPSERTLHTAELIKGERD-IPIIADE 79 (203)
T ss_pred ceEEEEEeCCCCccchhCcccCCCCCCcCHHHHHHHHHHHHHh-cCCCCCEEEECCcHHHHHHHHHHHhcCC-CCceECc
Confidence 4789999999999999999999999999999999999999999 4568999999999999999999988777 7899999
Q ss_pred CccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHH
Q 024700 160 ELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTL 239 (264)
Q Consensus 160 ~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l 239 (264)
+|+|+++|.|+|++..++.+.+|+.+..|+.++..+..| +|||+.++..|+..+++.+.+++.+++|||||||++|+++
T Consensus 80 ~l~E~~~G~~eG~~~~e~~~~~p~~~~~~~~~~~~~~~~-~gEs~~~~~~R~~~~l~~i~~~~~~~~vlvVsHg~~ir~~ 158 (203)
T PRK13463 80 HFYEINMGIWEGQTIDDIERQYPDDIQLFWNEPHLFQST-SGENFEAVHKRVIEGMQLLLEKHKGESILIVSHAAAAKLL 158 (203)
T ss_pred CceeCCCCccCCCcHHHHhhhCHHHHHHHHhChhccCCC-CCeEHHHHHHHHHHHHHHHHHhCCCCEEEEEeChHHHHHH
Confidence 999999999999999999999999999998887666666 9999999999999999999887778899999999999999
Q ss_pred HHHhcCCCCCCC
Q 024700 240 YQRACPNKKPEG 251 (264)
Q Consensus 240 ~~~l~g~~~~~~ 251 (264)
+++++|.+....
T Consensus 159 ~~~~~~~~~~~~ 170 (203)
T PRK13463 159 VGHFAGIEIENV 170 (203)
T ss_pred HHHHhCCCHHHH
Confidence 999999887643
No 2
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=8.4e-39 Score=268.86 Aligned_cols=169 Identities=26% Similarity=0.341 Sum_probs=154.7
Q ss_pred eEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCccEEECCC
Q 024700 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPE 160 (264)
Q Consensus 81 ~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~~ 160 (264)
|+||||||||+.+|..+.++|+.|.|||+.|++||+.+++.| ...+++.|||||+.||+|||+.+++..+ .++.+++.
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~d~pLt~~G~~Qa~~~~~~l-~~~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~~~~~~~ 78 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLL-RDVPFDLVLCSELERAQHTARLVLSDRQ-LPVHIIPE 78 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCCCCCcCHHHHHHHHHHHHHH-hCCCCCEEEECchHHHHHHHHHHHhcCC-CCceeChh
Confidence 579999999999999999999999999999999999999999 4578999999999999999999998777 78999999
Q ss_pred ccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHH
Q 024700 161 LRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLY 240 (264)
Q Consensus 161 L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~ 240 (264)
|+|+++|.|+|++..++.+.+|+.|..|..++.....| +|||+.++.+|+.++++++.+.+++++|||||||++|++++
T Consensus 79 L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gEs~~~~~~Rv~~~l~~l~~~~~~~~iliVsHg~~i~~l~ 157 (199)
T PRK15004 79 LNEMFFGDWEMRHHRDLMQEDAENYAAWCNDWQHAIPT-NGEGFQAFSQRVERFIARLSAFQHYQNLLIVSHQGVLSLLI 157 (199)
T ss_pred heeCCCcccCCCCHHHHHHHCHHHHHHHHhChhhcCCC-CCcCHHHHHHHHHHHHHHHHHhCCCCeEEEEcChHHHHHHH
Confidence 99999999999999999999999999888765544444 89999999999999999999877778999999999999999
Q ss_pred HHhcCCCCCCCc
Q 024700 241 QRACPNKKPEGF 252 (264)
Q Consensus 241 ~~l~g~~~~~~~ 252 (264)
++++|.+....+
T Consensus 158 ~~~~~~~~~~~~ 169 (199)
T PRK15004 158 ARLLGMPAEAMW 169 (199)
T ss_pred HHHhCCCHHHHh
Confidence 999999886543
No 3
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.9e-38 Score=272.09 Aligned_cols=173 Identities=27% Similarity=0.355 Sum_probs=149.9
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--ccEE
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVI 156 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~--~~v~ 156 (264)
|++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|+.. .+++.|||||+.||+|||+.+++..+. .++.
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~~~~~~ 80 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVY 80 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEeCccHHHHHHHHHHHHhcccCCCCee
Confidence 5789999999999999999999999999999999999999999643 679999999999999999999876532 5788
Q ss_pred ECCCccccccCCCCCCCHHHHHhhChHH-HHHhhcCCCC-----------------------CCCCCCCCCHHHHHHHHH
Q 024700 157 EDPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKTD-----------------------QDIPGGGESLDQLYRRCT 212 (264)
Q Consensus 157 ~~~~L~E~~~G~~~g~~~~e~~~~~~~~-~~~~~~~~~~-----------------------~~~p~~gEs~~~~~~R~~ 212 (264)
++++|+|++||.|+|++.+++.+.+|+. +..|..+... ...+++|||+.++.+|+.
T Consensus 81 ~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~ 160 (228)
T PRK14119 81 KSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVI 160 (228)
T ss_pred ECCCccccccccccCCcHHHHHHHccHHHHHHHHcccccCCCcccccccccccccccccccccccCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999985 5566543211 011348999999999999
Q ss_pred HHHHHHHHhC--CCCeEEEEechHHHHHHHHHhcCCCCCCCc
Q 024700 213 SALQRIARKH--IGERIVVVTHGGVIRTLYQRACPNKKPEGF 252 (264)
Q Consensus 213 ~~l~~l~~~~--~~~~ilvVsHg~~i~~l~~~l~g~~~~~~~ 252 (264)
.+++++..++ ++++|||||||++|++++++++|.+....+
T Consensus 161 ~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~~ 202 (228)
T PRK14119 161 PFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDII 202 (228)
T ss_pred HHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHHh
Confidence 9999987654 678999999999999999999998886544
No 4
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.4e-38 Score=272.74 Aligned_cols=180 Identities=24% Similarity=0.393 Sum_probs=152.2
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--ccEE
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVI 156 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~--~~v~ 156 (264)
|++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|+.. .++|.|||||+.||+|||+.|++..+. .++.
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~~~~~~ 80 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWVDVDLSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYALEESDQLWIPET 80 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCcCCCCcc
Confidence 5789999999999999999999999999999999999999999643 679999999999999999999876542 5688
Q ss_pred ECCCccccccCCCCCCCHHHHHhhChHH-HHHhhcCCC-----------------------CCCCCCCCCCHHHHHHHHH
Q 024700 157 EDPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKT-----------------------DQDIPGGGESLDQLYRRCT 212 (264)
Q Consensus 157 ~~~~L~E~~~G~~~g~~~~e~~~~~~~~-~~~~~~~~~-----------------------~~~~p~~gEs~~~~~~R~~ 212 (264)
++++|+|++||.|+|++.+++.+.+|+. +..|..+.. ....+++|||+.++.+|+.
T Consensus 81 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgGEs~~~~~~Rv~ 160 (228)
T PRK14116 81 KTWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRIIPGGENLKVTLERVI 160 (228)
T ss_pred cCcccccccchhhcCCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccCCCCCCCHHHHHHHHH
Confidence 8999999999999999999999999986 566654311 0112349999999999999
Q ss_pred HHHHHHHH-h-CCCCeEEEEechHHHHHHHHHhcCCCCCCCc-cccCCCC
Q 024700 213 SALQRIAR-K-HIGERIVVVTHGGVIRTLYQRACPNKKPEGF-LKSGFGG 259 (264)
Q Consensus 213 ~~l~~l~~-~-~~~~~ilvVsHg~~i~~l~~~l~g~~~~~~~-~~~~~~~ 259 (264)
.+++++.. . +++++|||||||++|++++++++|.+....+ +..++|+
T Consensus 161 ~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~ 210 (228)
T PRK14116 161 PFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDIMNLEMATGE 210 (228)
T ss_pred HHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHHHhccCCCCC
Confidence 99999764 2 3678999999999999999999999887544 3444443
No 5
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=1.5e-37 Score=256.10 Aligned_cols=165 Identities=36% Similarity=0.591 Sum_probs=150.6
Q ss_pred EEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCccEEECCCcc
Q 024700 83 IIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELR 162 (264)
Q Consensus 83 i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~~L~ 162 (264)
||||||||+.+|..+.+ |+.|.|||+.|++||+.+++.| ...+++.|||||+.||+|||+.+++.++ .++.+++.|+
T Consensus 1 i~lvRHg~t~~n~~~~~-g~~d~~Lt~~G~~qa~~l~~~l-~~~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~~~~~~~L~ 77 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQTDVPLAEKGAEQAAALREKL-ADVPFDAVYSSPLSRCRELAEILAERRG-LPIIKDPRLR 77 (177)
T ss_pred CEEEeCCCCccCCCcee-CCCCCCcChhHHHHHHHHHHHh-cCCCCCEEEECchHHHHHHHHHHHhhcC-CCceECCccc
Confidence 69999999999998888 8899999999999999999999 4578999999999999999999999887 7899999999
Q ss_pred ccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHH
Q 024700 163 ERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQR 242 (264)
Q Consensus 163 E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~~~ 242 (264)
|+++|.|+|++.+++.+.+| .+..|..++.....| ++|++.++..|+.++++++.+++++++|||||||++|++++++
T Consensus 78 E~~~G~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-~gEs~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg~~i~~l~~~ 155 (177)
T TIGR03162 78 EMDFGDWEGRSWDEIPEAYP-ELDAWAADWQHARPP-GGESFADFYQRVSEFLEELLKAHEGDNVLIVTHGGVIRALLAH 155 (177)
T ss_pred cccCCccCCCCHHHHHHhCH-HHHHHHhCcccCCCc-CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHH
Confidence 99999999999999999888 577787766555555 8999999999999999999987677899999999999999999
Q ss_pred hcCCCCCCCc
Q 024700 243 ACPNKKPEGF 252 (264)
Q Consensus 243 l~g~~~~~~~ 252 (264)
++|.++...+
T Consensus 156 ~~~~~~~~~~ 165 (177)
T TIGR03162 156 LLGLPLEQWW 165 (177)
T ss_pred HhCCCHHHHh
Confidence 9999887544
No 6
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=2.5e-37 Score=262.82 Aligned_cols=169 Identities=36% Similarity=0.488 Sum_probs=147.5
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCccEEECC
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDP 159 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~ 159 (264)
|++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.| ...+++.|||||+.||+|||+++++.++ .++.+++
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~d~~Lt~~G~~qA~~~~~~l-~~~~~~~I~sSpl~Ra~qTA~~i~~~~~-~~~~~~~ 78 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVAERA-KELGITHIISSDLGRTRRTAEIIAQACG-CDIIFDP 78 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCCCCCcCHHHHHHHHHHHHHH-hcCCCCEEEECCcHHHHHHHHHHHHhcC-CCeeECh
Confidence 6899999999999999999999999999999999999999999 4568999999999999999999999888 7899999
Q ss_pred CccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHH
Q 024700 160 ELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTL 239 (264)
Q Consensus 160 ~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l 239 (264)
+|+|+++|.|+|++.+++....+.....+.........| +|||+.++..|+..+++++.+.+.+++|||||||++|+++
T Consensus 79 ~L~E~~~G~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~p-~gEs~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg~~i~~l 157 (215)
T PRK03482 79 RLRELNMGVLEKRHIDSLTEEEEGWRRQLVNGTVDGRIP-EGESMQELSDRMHAALESCLELPQGSRPLLVSHGIALGCL 157 (215)
T ss_pred hccccCCccccCCcHHHHHhhHHHHHHhhhcCCCccCCC-CCccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH
Confidence 999999999999999887655443333333334444455 8999999999999999999877677889999999999999
Q ss_pred HHHhcCCCCCCC
Q 024700 240 YQRACPNKKPEG 251 (264)
Q Consensus 240 ~~~l~g~~~~~~ 251 (264)
+++++|.+....
T Consensus 158 ~~~l~~~~~~~~ 169 (215)
T PRK03482 158 VSTILGLPAWAE 169 (215)
T ss_pred HHHHhCCChhhh
Confidence 999999887643
No 7
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.8e-37 Score=260.08 Aligned_cols=172 Identities=31% Similarity=0.443 Sum_probs=150.7
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcC--CccEE
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKVI 156 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~--~~~v~ 156 (264)
.++||||||||+.+|..+.++|+.|.|||+.|++||+.++++|+.. .++|.|||||+.||+|||+.|++.++ ..++.
T Consensus 2 ~~~i~LVRHGet~~n~~~~~~G~~d~~Lt~~G~~qA~~~~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~ 81 (206)
T PRK01295 2 SRTLVLVRHGQSEWNLKNLFTGWRDPDLTEQGVAEAKAAGRKLKAAGLKFDIAFTSALSRAQHTCQLILEELGQPGLETI 81 (206)
T ss_pred CceEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEeCCcHHHHHHHHHHHHHcCCCCCCeE
Confidence 3789999999999999999999999999999999999999999643 67999999999999999999999875 36789
Q ss_pred ECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHHhC-CCCeEEEEechH
Q 024700 157 EDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSAL-QRIARKH-IGERIVVVTHGG 234 (264)
Q Consensus 157 ~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l-~~l~~~~-~~~~ilvVsHg~ 234 (264)
+++.|+|+++|.|+|++.+++.+.+|+.+..++.++.....| +|||+.++.+|+..++ +.+..+. .+++|||||||+
T Consensus 82 ~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~~~~~~~~~~~~p-~GES~~~~~~Rv~~~~~~~i~~~~~~~~~vliVtHg~ 160 (206)
T PRK01295 82 RDQALNERDYGDLSGLNKDDARAKWGEEQVHIWRRSYDVPPP-GGESLKDTGARVLPYYLQEILPRVLRGERVLVAAHGN 160 (206)
T ss_pred ECCcccccccccccCCcHHHHHHHchHHHHHHhhcccCCCCc-CCCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEcChH
Confidence 999999999999999999999999998665555544455555 9999999999999975 5565543 568999999999
Q ss_pred HHHHHHHHhcCCCCCCCc
Q 024700 235 VIRTLYQRACPNKKPEGF 252 (264)
Q Consensus 235 ~i~~l~~~l~g~~~~~~~ 252 (264)
+|+++++++++.+....+
T Consensus 161 ~ir~l~~~~l~~~~~~~~ 178 (206)
T PRK01295 161 SLRALVMVLDGLTPEQIL 178 (206)
T ss_pred HHHHHHHHHhCCCHHHHh
Confidence 999999999999987544
No 8
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.6e-37 Score=263.81 Aligned_cols=177 Identities=25% Similarity=0.384 Sum_probs=152.4
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcC--------
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCG-------- 151 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~-------- 151 (264)
|++||||||||+.+|..+.++|+.|.+||+.|++||+.++++|. ..+++.|||||+.||+|||+.+++.++
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~D~~Lte~G~~Qa~~l~~~L~-~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~ 79 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWVDIPLSQQGIAEAIAAGEKIK-DLPIDCIFTSTLVRSLMTALLAMTNHSSGKIPYIV 79 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHhh-cCCCCEEEEcCcHHHHHHHHHHHHhhccccccccc
Confidence 68999999999999999999999999999999999999999994 578999999999999999999985321
Q ss_pred --------------------CccEEECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHH
Q 024700 152 --------------------GLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRC 211 (264)
Q Consensus 152 --------------------~~~v~~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~ 211 (264)
..++..++.|+|+++|.|+|++.+++.+.+|+.+..++.++.....| +|||+.++..|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p-~GES~~d~~~Rv 158 (228)
T PRK01112 80 HEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVKLWRRSYKTAPP-QGESLEDTGQRT 158 (228)
T ss_pred ccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHHHHhCcCCCCCC-CCCCHHHHHHHH
Confidence 14678899999999999999999999999998766666655555555 999999999999
Q ss_pred HHHHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCCCCCCc-cccCCC
Q 024700 212 TSALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNKKPEGF-LKSGFG 258 (264)
Q Consensus 212 ~~~l~~l~~~--~~~~~ilvVsHg~~i~~l~~~l~g~~~~~~~-~~~~~~ 258 (264)
..+++.+..+ ..+++|+|||||++|+++++++++.+.+..+ +..++|
T Consensus 159 ~~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~~~~~~~~~ 208 (228)
T PRK01112 159 LPYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEVLSLELPTG 208 (228)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhhcccCCc
Confidence 9999976433 2568999999999999999999999997544 444444
No 9
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.5e-37 Score=264.01 Aligned_cols=179 Identities=24% Similarity=0.388 Sum_probs=150.3
Q ss_pred eEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--ccEEE
Q 024700 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVIE 157 (264)
Q Consensus 81 ~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~--~~v~~ 157 (264)
|+||||||||+.+|..++++|+.|.|||+.|++||+.+++.|+.. .+++.|||||+.||+|||+.|++..+. .++.+
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~d~~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~~ 80 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKAAGKKLKEAGYEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQVK 80 (227)
T ss_pred CEEEEEecCCCccccccCcCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEEeChHHHHHHHHHHHHhcCCCCCCeec
Confidence 579999999999999999999999999999999999999999643 679999999999999999999886542 56888
Q ss_pred CCCccccccCCCCCCCHHHHHhhChHH-HHHhhcCCCC-----------------------CCCCCCCCCHHHHHHHHHH
Q 024700 158 DPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKTD-----------------------QDIPGGGESLDQLYRRCTS 213 (264)
Q Consensus 158 ~~~L~E~~~G~~~g~~~~e~~~~~~~~-~~~~~~~~~~-----------------------~~~p~~gEs~~~~~~R~~~ 213 (264)
+++|+|++||.|+|++.+++.+.+|+. +..|..+... ...+++|||+.++.+|+.+
T Consensus 81 ~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GEs~~~~~~Rv~~ 160 (227)
T PRK14118 81 NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADVVPDAENLKVTLERVLP 160 (227)
T ss_pred CCccccccCccccCCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999875 4455432110 1123499999999999999
Q ss_pred HHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCCCCCCc-cccCCCC
Q 024700 214 ALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNKKPEGF-LKSGFGG 259 (264)
Q Consensus 214 ~l~~l~~~--~~~~~ilvVsHg~~i~~l~~~l~g~~~~~~~-~~~~~~~ 259 (264)
+++++... +++++|||||||++|++++++++|.+....+ +..++|+
T Consensus 161 ~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~~~~~i~~~s 209 (227)
T PRK14118 161 FWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADIMDLEIPTGQ 209 (227)
T ss_pred HHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHHhcccCCCCc
Confidence 99997753 3678999999999999999999998886543 3444443
No 10
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.5e-37 Score=264.42 Aligned_cols=172 Identities=25% Similarity=0.339 Sum_probs=147.2
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcC--CccEE
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKVI 156 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~--~~~v~ 156 (264)
|++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|... .+++.|||||+.||+|||+++++..+ ..++.
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~D~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~ 80 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLALEASDQLWVPVE 80 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCCCCCcCHHHHHHHHHHHHHHHHcCCCCCEEEECCcHHHHHHHHHHHHhcccCCCCce
Confidence 6899999999999999999999999999999999999999999643 68999999999999999999875332 16788
Q ss_pred ECCCccccccCCCCCCCHHHHHhhChHH-HHHhhcCC------------------------CCCCCCCCCCCHHHHHHHH
Q 024700 157 EDPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGK------------------------TDQDIPGGGESLDQLYRRC 211 (264)
Q Consensus 157 ~~~~L~E~~~G~~~g~~~~e~~~~~~~~-~~~~~~~~------------------------~~~~~p~~gEs~~~~~~R~ 211 (264)
++++|+|++||.|+|++.+++.+.+|+. +..|..+. .+. .+++|||+.++.+|+
T Consensus 81 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~GEs~~~~~~Rv 159 (230)
T PRK14117 81 KSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDS-VIPDAENLKVTLERA 159 (230)
T ss_pred eCCccccccchhhcCCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccC-CCCCCCCHHHHHHHH
Confidence 9999999999999999999999999986 45565321 111 234999999999999
Q ss_pred HHHHHHHH-HhC-CCCeEEEEechHHHHHHHHHhcCCCCCCCc
Q 024700 212 TSALQRIA-RKH-IGERIVVVTHGGVIRTLYQRACPNKKPEGF 252 (264)
Q Consensus 212 ~~~l~~l~-~~~-~~~~ilvVsHg~~i~~l~~~l~g~~~~~~~ 252 (264)
..+++++. ... .+++|||||||++|++++++++|.+....+
T Consensus 160 ~~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~~ 202 (230)
T PRK14117 160 LPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEIM 202 (230)
T ss_pred HHHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHHh
Confidence 99999976 333 457899999999999999999998876443
No 11
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=255.58 Aligned_cols=168 Identities=42% Similarity=0.616 Sum_probs=158.7
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhh-hCCccEEEECChHHHHHHHHHHHHHcCCccEEEC
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAK-EFKISVIYSSDLKRALETAQTIANRCGGLKVIED 158 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~-~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~ 158 (264)
+++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|.. ...++.||+||+.||+|||+.+++.++ .++.++
T Consensus 2 ~~~i~lvRHGqt~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sS~l~Ra~~TA~~~a~~~~-~~~~~~ 80 (208)
T COG0406 2 MMRLYLVRHGETEWNVEGRLQGWTDSPLTEEGRAQAEALAERLAARDIGFDAIYSSPLKRAQQTAEPLAEELG-LPLEVD 80 (208)
T ss_pred ceEEEEEecCCccccccccccCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCEEEECchHHHHHHHHHHHHhcC-CCceec
Confidence 689999999999999999999988999999999999999999965 488999999999999999999999999 669999
Q ss_pred CCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 024700 159 PELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (264)
Q Consensus 159 ~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~ 238 (264)
+.|+|+++|.|+|++.+++.+.+|..+..|..++..+..| ++|++.++..|+..++.++...+.+++|+|||||++|++
T Consensus 81 ~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~~~~~~~~~~~-~gEs~~~~~~R~~~~~~~~~~~~~~~~vlvVsHg~~ir~ 159 (208)
T COG0406 81 DRLREIDFGDWEGLTIDELAEEPPEELAAWLADPYLAPPP-GGESLADVSKRVVAALAELLRSPPGNNVLVVSHGGVIRA 159 (208)
T ss_pred CCeeEeecccccCCcHHHHHHhCHHHHHHHhcCccccCCC-CCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEChHHHHH
Confidence 9999999999999999999999999999999988888777 699999999999999999999876668999999999999
Q ss_pred HHHHhcCCCCC
Q 024700 239 LYQRACPNKKP 249 (264)
Q Consensus 239 l~~~l~g~~~~ 249 (264)
++++++|.+..
T Consensus 160 l~~~~~~~~~~ 170 (208)
T COG0406 160 LLAYLLGLDLE 170 (208)
T ss_pred HHHHhcCCChh
Confidence 99999998875
No 12
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.7e-36 Score=261.32 Aligned_cols=181 Identities=24% Similarity=0.316 Sum_probs=152.4
Q ss_pred CceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcC--CccE
Q 024700 79 DYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG--GLKV 155 (264)
Q Consensus 79 ~~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~--~~~v 155 (264)
.|++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|... ..++.|||||+.||+|||+.+++..+ ..++
T Consensus 3 ~m~~i~LVRHGqt~~n~~~~~~G~~D~pLTe~G~~QA~~~a~~l~~~~~~~~~IysSpl~Ra~qTA~~i~~~~~~~~~~i 82 (249)
T PRK14120 3 MTYTLVLLRHGESEWNAKNLFTGWVDVDLTEKGEAEAKRGGELLAEAGVLPDVVYTSLLRRAIRTANLALDAADRLWIPV 82 (249)
T ss_pred CCcEEEEEeCCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEecChHHHHHHHHHHHHhcccCCCCe
Confidence 46899999999999999999999999999999999999999999643 57899999999999999999987543 2678
Q ss_pred EECCCccccccCCCCCCCHHHHHhhChH-HHHHhhcCCCCCC---------------------CCCCCCCHHHHHHHHHH
Q 024700 156 IEDPELRERHLGDLQGLVFREAAKVCPI-AYQAFLSGKTDQD---------------------IPGGGESLDQLYRRCTS 213 (264)
Q Consensus 156 ~~~~~L~E~~~G~~~g~~~~e~~~~~~~-~~~~~~~~~~~~~---------------------~p~~gEs~~~~~~R~~~ 213 (264)
.+++.|+|++||.|+|++..++.+++|+ .+..|..+..... .+++|||+.++..|+..
T Consensus 83 ~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p~GES~~~~~~Rv~~ 162 (249)
T PRK14120 83 RRSWRLNERHYGALQGKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVGPRTECLKDVVARFLP 162 (249)
T ss_pred EECCCcccccccccCCCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999987 4777765422111 13499999999999999
Q ss_pred HHHHH-HH-hCCCCeEEEEechHHHHHHHHHhcCCCCCCCc-cccCCCC
Q 024700 214 ALQRI-AR-KHIGERIVVVTHGGVIRTLYQRACPNKKPEGF-LKSGFGG 259 (264)
Q Consensus 214 ~l~~l-~~-~~~~~~ilvVsHg~~i~~l~~~l~g~~~~~~~-~~~~~~~ 259 (264)
+++++ .+ .+++++|||||||++|+++++++++.+....+ +..++|+
T Consensus 163 ~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~~~~~i~~~~ 211 (249)
T PRK14120 163 YWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDIAGLNIPTGI 211 (249)
T ss_pred HHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHhheeccCCCc
Confidence 99985 33 33678899999999999999999999987654 4444443
No 13
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=2.5e-36 Score=254.67 Aligned_cols=164 Identities=35% Similarity=0.475 Sum_probs=145.2
Q ss_pred EEEEEecCCCCCccCCcccCCC-CCCCCHhhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCccEEECCC
Q 024700 82 EIIVVRHGETPWNVQGKIQGHL-DVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVIEDPE 160 (264)
Q Consensus 82 ~i~LiRHGes~~n~~~~~~g~~-D~pLT~~G~~QA~~~~~~L~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~~ 160 (264)
+||||||||+.+|..+.++|+. |.|||+.|++||+.++++|+ ..+++.|||||+.||+|||+.+++.++ .++.+++.
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l~-~~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~~~~~~~ 78 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRTPGVDLDERGREQAAALAERLA-DLPIAAIVSSPLERCRETAEPIAEARG-LPPRVDER 78 (204)
T ss_pred CEEEEeCCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHh-cCCCCEEEeCcHHHHHHHHHHHHHhcC-CCceECcc
Confidence 4899999999999999999998 49999999999999999994 578999999999999999999999887 78999999
Q ss_pred ccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-----CCCCeEEEEechHH
Q 024700 161 LRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARK-----HIGERIVVVTHGGV 235 (264)
Q Consensus 161 L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~-----~~~~~ilvVsHg~~ 235 (264)
|+|+++|.|+|++.+++.+. +.|..|..++.....| +|||+.++..|+..+++.+.++ ..+++|||||||++
T Consensus 79 L~E~~~G~~eG~~~~e~~~~--~~~~~~~~~~~~~~~p-~gEs~~~~~~R~~~~l~~~~~~~~~~~~~~~~vliVsHg~~ 155 (204)
T TIGR03848 79 LGECDYGDWTGRELKELAKE--PLWPVVQAHPSAAVFP-GGESLAQVQARAVAAVREHDARLAAEHGPDAVWVACSHGDV 155 (204)
T ss_pred cccCCCCeeCCcCHHHHhCc--HHHHHHhcCcccCCCC-CCCCHHHHHHHHHHHHHHHHHHhhhccCCCCEEEEEeCChH
Confidence 99999999999999998754 3466666555555555 8999999999999999998765 35678999999999
Q ss_pred HHHHHHHhcCCCCCC
Q 024700 236 IRTLYQRACPNKKPE 250 (264)
Q Consensus 236 i~~l~~~l~g~~~~~ 250 (264)
|++++++++|.+...
T Consensus 156 ir~ll~~~lg~~~~~ 170 (204)
T TIGR03848 156 IKSVLADALGMHLDL 170 (204)
T ss_pred HHHHHHHHhCCCHHH
Confidence 999999999988864
No 14
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=5.1e-36 Score=259.21 Aligned_cols=172 Identities=28% Similarity=0.381 Sum_probs=147.6
Q ss_pred eEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--ccEEE
Q 024700 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVIE 157 (264)
Q Consensus 81 ~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~--~~v~~ 157 (264)
|+||||||||+.+|..+.++|+.|.+||+.|++||+.++++|+.. ..++.|||||+.||+|||+++++.++. .++.+
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~D~~Lt~~G~~QA~~la~~L~~~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~~~~i~~ 80 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWVDVKLSEKGQQEAKRAGELLKEEGYEFDVAYTSLLKRAIHTLNIALDELDQLWIPVKK 80 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcChHHHHHHHHHHHHhcCCCCCCeee
Confidence 579999999999999999999999999999999999999999644 579999999999999999999987652 46788
Q ss_pred CCCccccccCCCCCCCHHHHHhhChHH-HHHhhcCCCC------------------CC-----CCCCCCCHHHHHHHHHH
Q 024700 158 DPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKTD------------------QD-----IPGGGESLDQLYRRCTS 213 (264)
Q Consensus 158 ~~~L~E~~~G~~~g~~~~e~~~~~~~~-~~~~~~~~~~------------------~~-----~p~~gEs~~~~~~R~~~ 213 (264)
++.|+|+++|.|+|++.+++.+.+|+. +..|..+... +. .+++|||+.++..|+..
T Consensus 81 ~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~~p~GES~~~~~~Rv~~ 160 (245)
T TIGR01258 81 SWRLNERHYGALQGLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKVLPLTESLKDTIARVLP 160 (245)
T ss_pred CcccccccCCCCcCCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCcccCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999875 5555432111 10 13489999999999999
Q ss_pred HHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCCCCCCc
Q 024700 214 ALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNKKPEGF 252 (264)
Q Consensus 214 ~l~~l~~~--~~~~~ilvVsHg~~i~~l~~~l~g~~~~~~~ 252 (264)
+++++... .++++|||||||++|+++++++++.+....+
T Consensus 161 ~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~~ 201 (245)
T TIGR01258 161 YWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEIL 201 (245)
T ss_pred HHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHHh
Confidence 99998643 3667999999999999999999999887544
No 15
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=8.8e-36 Score=258.02 Aligned_cols=172 Identities=27% Similarity=0.378 Sum_probs=147.4
Q ss_pred eEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--ccEEE
Q 024700 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVIE 157 (264)
Q Consensus 81 ~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~--~~v~~ 157 (264)
|+||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|+.. .+++.|||||+.||+|||+.|++.++. .++.+
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~D~pLte~G~~QA~~la~~L~~~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~~~~~~~ 80 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWTDVDLSEKGVSEAKAAGKLLKEEGYTFDVAYTSVLKRAIRTLWIVLDELDQMWLPVEK 80 (247)
T ss_pred CEEEEEECCCcccccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcCCHHHHHHHHHHHHHcCCCCCCceE
Confidence 579999999999999999999999999999999999999999644 579999999999999999999987763 37899
Q ss_pred CCCccccccCCCCCCCHHHHHhhChHH-HHHhhcCCCC------------------C-----CCCCCCCCHHHHHHHHHH
Q 024700 158 DPELRERHLGDLQGLVFREAAKVCPIA-YQAFLSGKTD------------------Q-----DIPGGGESLDQLYRRCTS 213 (264)
Q Consensus 158 ~~~L~E~~~G~~~g~~~~e~~~~~~~~-~~~~~~~~~~------------------~-----~~p~~gEs~~~~~~R~~~ 213 (264)
++.|+|++||.|+|++.+++.+.+|+. +..|...... + ..+++|||+.++..|+.+
T Consensus 81 ~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~ 160 (247)
T PRK14115 81 SWRLNERHYGALQGLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEELPLTESLKDTIARVLP 160 (247)
T ss_pred CccccccccccccCCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999875 5555442110 0 113489999999999999
Q ss_pred HHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCCCCCCc
Q 024700 214 ALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNKKPEGF 252 (264)
Q Consensus 214 ~l~~l~~~--~~~~~ilvVsHg~~i~~l~~~l~g~~~~~~~ 252 (264)
+++++..+ .++++|||||||++|+++++++++.+....+
T Consensus 161 ~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~~ 201 (247)
T PRK14115 161 YWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEIL 201 (247)
T ss_pred HHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHhh
Confidence 99987542 3678999999999999999999999876443
No 16
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=5.2e-36 Score=252.52 Aligned_cols=161 Identities=28% Similarity=0.413 Sum_probs=140.6
Q ss_pred CCceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhhCCcc--EEEECChHHHHHHHHHHHHHcCCccE
Q 024700 78 PDYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKIS--VIYSSDLKRALETAQTIANRCGGLKV 155 (264)
Q Consensus 78 ~~~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~~~~~--~i~sSpl~Ra~qTA~~i~~~~~~~~v 155 (264)
..|++||||||||+.+|..+.++|+.|.|||+.|++||+.+++.|. ..+++ .|||||+.||+|||+.+. + ..+
T Consensus 3 ~~~~~i~LvRHG~t~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~-~~~~~~~~i~sSpl~Ra~qTA~~i~--~--~~~ 77 (203)
T PRK13462 3 VRNHRLLLLRHGETEWSKSGRHTGRTELELTETGRTQAELAGQALG-ELELDDPLVISSPRRRALDTAKLAG--L--TVD 77 (203)
T ss_pred ccccEEEEEeCCCCCcccCCCccCCCCCCCCHHHHHHHHHHHHHHH-hCCCCCCEEEECchHHHHHHHHHhc--C--ccc
Confidence 3589999999999999999999999999999999999999999994 44455 799999999999999882 2 223
Q ss_pred EECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHH
Q 024700 156 IEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGV 235 (264)
Q Consensus 156 ~~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~ 235 (264)
.+++.|+|+++|.|+|++..++.+.+|+ +..|. ...| +|||+.++..|+.++++.+.+.+++++|||||||++
T Consensus 78 ~~~~~LrE~~~G~~eG~~~~ei~~~~~~-~~~~~-----~~~p-~gES~~~~~~Rv~~~l~~i~~~~~~~~vliVsHg~v 150 (203)
T PRK13462 78 EVSGLLAEWDYGSYEGLTTPQIRESEPD-WLVWT-----HGCP-GGESVAQVNERADRAVALALEHMESRDVVFVSHGHF 150 (203)
T ss_pred ccCccccccCCccccCCcHHHHHHhCch-HHhhc-----CCCC-CCccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCHH
Confidence 6799999999999999999999998887 33443 2235 899999999999999999988777889999999999
Q ss_pred HHHHHHHhcCCCCCC
Q 024700 236 IRTLYQRACPNKKPE 250 (264)
Q Consensus 236 i~~l~~~l~g~~~~~ 250 (264)
|+++++++++.+...
T Consensus 151 ir~ll~~~l~~~~~~ 165 (203)
T PRK13462 151 SRAVITRWVELPLAE 165 (203)
T ss_pred HHHHHHHHhCCCHHH
Confidence 999999999998764
No 17
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=100.00 E-value=6.1e-35 Score=267.32 Aligned_cols=174 Identities=35% Similarity=0.456 Sum_probs=157.3
Q ss_pred CCCCceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCccE
Q 024700 76 VGPDYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKV 155 (264)
Q Consensus 76 ~~~~~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v 155 (264)
....+++||||||||+.+|..+.++|+.|.+||+.|++||+.+++.|....+++.|||||+.||+|||+.+++.++ .++
T Consensus 167 ~~~~~~~i~LvRHGet~~n~~~~~~g~~D~~Lt~~G~~QA~~l~~~l~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~-~~~ 245 (372)
T PRK07238 167 ARGTPTRLLLLRHGQTELSVQRRYSGRGNPELTEVGRRQAAAAARYLAARGGIDAVVSSPLQRARDTAAAAAKALG-LDV 245 (372)
T ss_pred CCCCceEEEEEeCCCCCcccCCeeeCCCCCCcCHHHHHHHHHHHHHHhccCCCCEEEECChHHHHHHHHHHHHhcC-CCc
Confidence 3456799999999999999999999999999999999999999999943238999999999999999999999888 789
Q ss_pred EECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHH
Q 024700 156 IEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGV 235 (264)
Q Consensus 156 ~~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~ 235 (264)
.+++.|+|+++|.|+|++..++.+.+|+.+..|..++ ... |+++|++.++..|+.+++++|...+++++|||||||++
T Consensus 246 ~~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~~~~-~~~-~p~gEs~~~~~~Rv~~~l~~l~~~~~~~~vlvVtHg~~ 323 (372)
T PRK07238 246 TVDDDLIETDFGAWEGLTFAEAAERDPELHRAWLADT-SVA-PPGGESFDAVARRVRRARDRLIAEYPGATVLVVSHVTP 323 (372)
T ss_pred EECccceeCCCCccCCCCHHHHHHHCHHHHHHHHhCC-CCC-CcCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEEChHH
Confidence 9999999999999999999999999999999998765 333 44999999999999999999988777789999999999
Q ss_pred HHHHHHHhcCCCCCCCc
Q 024700 236 IRTLYQRACPNKKPEGF 252 (264)
Q Consensus 236 i~~l~~~l~g~~~~~~~ 252 (264)
|++++++++|.+....+
T Consensus 324 ir~ll~~~l~~~~~~~~ 340 (372)
T PRK07238 324 IKTLLRLALDAGPGVLY 340 (372)
T ss_pred HHHHHHHHhCCCHHHhh
Confidence 99999999998876443
No 18
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=100.00 E-value=3e-34 Score=230.76 Aligned_cols=156 Identities=41% Similarity=0.684 Sum_probs=141.2
Q ss_pred EEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCCccEEECCC
Q 024700 82 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGLKVIEDPE 160 (264)
Q Consensus 82 ~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~~ 160 (264)
+|||||||++.+|..+.++++.|+|||+.|+.||+.+++.|... ..++.|||||+.||+|||+.+++.++ .++.+++.
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~d~~Lt~~G~~qA~~~~~~l~~~~~~~~~i~~Sp~~R~~qTA~~~~~~~~-~~~~~~~~ 79 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDSDPPLTERGREQARQLGEYLAERDIQIDVIYSSPLRRCIQTAEIIAEGLG-IEIIVDPR 79 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTSSTGBEHHHHHHHHHHHHHHHHTTSSCSEEEEESSHHHHHHHHHHHHHHT-SEEEEEGG
T ss_pred CEEEEECCccccccCCCcCCCCCccccHHHHHHHHhhcccccccccCceEEecCCcchhhhhhchhhcccc-cccccccc
Confidence 69999999999999999999999899999999999999999533 89999999999999999999999888 89999999
Q ss_pred ccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-hCCCCeEEEEechHHHHHH
Q 024700 161 LRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIAR-KHIGERIVVVTHGGVIRTL 239 (264)
Q Consensus 161 L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~-~~~~~~ilvVsHg~~i~~l 239 (264)
|+|+++|.|+|.+..++.+.++..+..|..+...+..| ++|++.++..|+.++++.+.. ..++++|||||||++|++|
T Consensus 80 l~E~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Es~~~~~~R~~~~~~~l~~~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 80 LREIDFGDWEGRPFDEIEEKFPDEFEAWWSDPYFYRPP-GGESWEDFQQRVKQFLDELIAYKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp GSCCGCGGGTTSBHHHHHHHHHHHHHHHHHHTSSCGST-TSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEE-HHHHHHH
T ss_pred cccccchhhcccchhhHHhhhhcccchhhccccccccc-cCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHHhC
Confidence 99999999999999999999998888888876666666 899999999999999999996 4578899999999999986
No 19
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-33 Score=233.58 Aligned_cols=172 Identities=34% Similarity=0.456 Sum_probs=153.4
Q ss_pred CceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--ccE
Q 024700 79 DYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKV 155 (264)
Q Consensus 79 ~~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~--~~v 155 (264)
...+++||||||+.||..+.++||.|.+||+.|.+||+.+++.|... ..++.+|||++.||+|||+.|++..+. .++
T Consensus 4 ~~~~lvlvRHGes~wN~e~~~~G~~D~~Lte~G~~qA~~~~~~l~~~~~~~~~~~tS~l~RakqT~~~il~~~~~~~~pv 83 (214)
T KOG0235|consen 4 NTFRLVLVRHGESEWNKENIFQGWIDAPLTEKGEEQAKAAAQRLKDLNIEFDVCYTSDLKRAKQTAELILEELKQKKVPV 83 (214)
T ss_pred cceEEEEEecCchhhhhhCcccccccCccChhhHHHHHHHHHHHHhcCCcccEEecCHHHHHHHHHHHHHHhhccCCcce
Confidence 46899999999999999999999999999999999999999999655 789999999999999999999998873 789
Q ss_pred EECCCccccccCCCCCCCHHHHHhhChHH--HHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh--CCCCeEEEEe
Q 024700 156 IEDPELRERHLGDLQGLVFREAAKVCPIA--YQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARK--HIGERIVVVT 231 (264)
Q Consensus 156 ~~~~~L~E~~~G~~~g~~~~e~~~~~~~~--~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~--~~~~~ilvVs 231 (264)
..++.|+|++||+++|+.+.++.+.+++. +..+.....+...++.+||+.++..|+.+++++.... .++++|+||+
T Consensus 84 ~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~i~~~~~~gk~Vli~a 163 (214)
T KOG0235|consen 84 LYTWRLNERHYGDLQGLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEEIAKESKEGKNVLIVA 163 (214)
T ss_pred EechhhchhhhccccCccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHHHhhhhhhcCCcEEEEEc
Confidence 99999999999999999999999999987 5555544444455559999999999999999986543 3689999999
Q ss_pred chHHHHHHHHHhcCCCCCC
Q 024700 232 HGGVIRTLYQRACPNKKPE 250 (264)
Q Consensus 232 Hg~~i~~l~~~l~g~~~~~ 250 (264)
||+.+|+++.++.|....+
T Consensus 164 HGnsLR~i~~~l~g~s~~~ 182 (214)
T KOG0235|consen 164 HGNSLRAIVKHLEGISDEA 182 (214)
T ss_pred CcHHHHHHHHHHhcCCHhh
Confidence 9999999999999988763
No 20
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=100.00 E-value=1.8e-32 Score=221.28 Aligned_cols=151 Identities=40% Similarity=0.607 Sum_probs=130.5
Q ss_pred EEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh--CCccEEEECChHHHHHHHHHHHHHcCCccEEECC
Q 024700 82 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE--FKISVIYSSDLKRALETAQTIANRCGGLKVIEDP 159 (264)
Q Consensus 82 ~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~ 159 (264)
+|||||||++.+|..+.++|+.|.|||+.|++||+.+++.|... ..++.|||||+.||+|||+.+++.++ .+ .+.+
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~~d~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~-~~-~~~~ 78 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGWTDSPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALG-LG-EVDP 78 (155)
T ss_pred CEEEEeCCCCcccccCeEcCCCCCCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcC-CC-CCCh
Confidence 48999999999998887778889999999999999999999552 68999999999999999999999877 44 3889
Q ss_pred CccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC--CCCeEEEEechHHHH
Q 024700 160 ELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKH--IGERIVVVTHGGVIR 237 (264)
Q Consensus 160 ~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~--~~~~ilvVsHg~~i~ 237 (264)
.|+|+++|.|+|++.+++.+.+++.+..| .... ++++|++.++..|+.++++.+..++ .+++|||||||++|+
T Consensus 79 ~L~E~~~G~~~g~~~~~~~~~~~~~~~~~----~~~~-~~~gEs~~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg~~ir 153 (155)
T smart00855 79 RLRERDYGAWEGLTKEEERAKAWTRPADW----LGAA-PPGGESLADVVERLVRALEELIATHDKSGQNVLIVSHGGVIR 153 (155)
T ss_pred hhhhcccceecCCcHHHHHHHHHHHHhcc----CCCC-CcCCCCHHHHHHHHHHHHHHHHHhcccCCCeEEEEECCcccc
Confidence 99999999999999999888777655444 2333 3489999999999999999998753 567899999999997
Q ss_pred HH
Q 024700 238 TL 239 (264)
Q Consensus 238 ~l 239 (264)
++
T Consensus 154 ~~ 155 (155)
T smart00855 154 AL 155 (155)
T ss_pred cC
Confidence 63
No 21
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.98 E-value=1.2e-31 Score=261.51 Aligned_cols=161 Identities=24% Similarity=0.349 Sum_probs=144.5
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh--CCccEEEECChHHHHHHHHHHHHH--------
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE--FKISVIYSSDLKRALETAQTIANR-------- 149 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~--~~~~~i~sSpl~Ra~qTA~~i~~~-------- 149 (264)
.|+||||||||+.+|..++++| |.|||+.|++||+.++++|... ..++.|||||+.||+|||+.+.+.
T Consensus 419 ~m~i~LiRHGeT~~n~~~r~~G--d~pLt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~i~~~~~~~~~~~ 496 (664)
T PTZ00322 419 PMNLYLTRAGEYVDLLSGRIGG--NSRLTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHYFAEESILQQSTA 496 (664)
T ss_pred CceEEEEecccchhhhcCccCC--CCccCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHHHHhccccccccc
Confidence 4789999999999999999998 8999999999999999999543 356799999999999999999753
Q ss_pred ---------cCCccEEECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHH-HHHHHHHHHHH
Q 024700 150 ---------CGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLY-RRCTSALQRIA 219 (264)
Q Consensus 150 ---------~~~~~v~~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~-~R~~~~l~~l~ 219 (264)
++ .++..++.|+|++||.|+|++.+++.+.+|+.|..|..++..+.+| +|||+.++. .|+..++.++.
T Consensus 497 ~~a~~~~~~~~-~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~~d~~~~~~P-~GES~~d~~~~R~~~~i~~l~ 574 (664)
T PTZ00322 497 SAASSQSPSLN-CRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMKADPYYTAWP-NGECIHQVFNARLEPHIHDIQ 574 (664)
T ss_pred ccccccccccc-ccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHHhCCCcCCCC-CCcCHHHHHHHHHHHHHHHHH
Confidence 23 5678899999999999999999999999999999999988877777 999999965 79999999986
Q ss_pred HhCCCCeEEEEechHHHHHHHHHhcCC
Q 024700 220 RKHIGERIVVVTHGGVIRTLYQRACPN 246 (264)
Q Consensus 220 ~~~~~~~ilvVsHg~~i~~l~~~l~g~ 246 (264)
.. .++|||||||++|+++++++++.
T Consensus 575 ~~--~~~ilvVsHg~vir~ll~~~~~~ 599 (664)
T PTZ00322 575 AS--TTPVLVVSHLHLLQGLYSYFVTD 599 (664)
T ss_pred cc--CCCEEEEeCcHHHHHHHHHHhcC
Confidence 53 36899999999999999999996
No 22
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.4e-31 Score=219.77 Aligned_cols=170 Identities=27% Similarity=0.393 Sum_probs=147.6
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--ccEE
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVI 156 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~--~~v~ 156 (264)
|+.++|+||||++||..+.|.||.|.+||+.|.+||...|+.|+.. ..||.+|||-+.||++|+.++++..+. .++.
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~Dv~LtekG~~EA~~ag~llk~~~~~~dia~TS~L~RAi~T~~i~L~e~d~~~ipv~ 80 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWVDVDLTEKGISEAKAAGKLLKEEGLEFDIAYTSVLKRAIKTLNIVLEESDQLWIPVI 80 (230)
T ss_pred CceEEEEecCchhhhhcCceeeeeecCcchhhHHHHHHHHHHHHHcCCCcceeehHHHHHHHHHHHHHhhhhcccCcchh
Confidence 5789999999999999999999999999999999999999999665 999999999999999999999998754 6788
Q ss_pred ECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCC------------------------CCCCCHHHHHHHHH
Q 024700 157 EDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIP------------------------GGGESLDQLYRRCT 212 (264)
Q Consensus 157 ~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p------------------------~~gEs~~~~~~R~~ 212 (264)
..+.|+|.+||.++|+++.+..++|.+..-..++...+...| |..|+..+...|+.
T Consensus 81 kswrLNERhYG~LqGlnK~~t~~kyGeeqv~~wRRsydi~PP~~~~~~~~~~~~d~ry~~~~~~~~p~~EsLkdt~~Rv~ 160 (230)
T COG0588 81 KSWRLNERHYGALQGLNKAETAAKYGEEQVLIWRRSYDIPPPKLEKDDERSPHRDRRYAHLDIGGLPLTESLKDTVERVL 160 (230)
T ss_pred hHHHhhhhhhhhhhcCChHHHHHHHhHHHHHHHHHhcCCCCCCcccccccccccccccccccccCCCccchHHHHHHHhh
Confidence 899999999999999999999999988654333222221111 14599999999999
Q ss_pred HHHHHHHHh--CCCCeEEEEechHHHHHHHHHhcCCCCC
Q 024700 213 SALQRIARK--HIGERIVVVTHGGVIRTLYQRACPNKKP 249 (264)
Q Consensus 213 ~~l~~l~~~--~~~~~ilvVsHg~~i~~l~~~l~g~~~~ 249 (264)
.+++..... ..+++|+||+||+.+|+|++++.|.+.+
T Consensus 161 Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~ 199 (230)
T COG0588 161 PYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDE 199 (230)
T ss_pred HHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHH
Confidence 999985542 3789999999999999999999998876
No 23
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.97 E-value=7.3e-30 Score=219.90 Aligned_cols=167 Identities=28% Similarity=0.377 Sum_probs=137.3
Q ss_pred CccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC--ccEEECCCccccccCCC
Q 024700 93 WNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG--LKVIEDPELRERHLGDL 169 (264)
Q Consensus 93 ~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~--~~v~~~~~L~E~~~G~~ 169 (264)
+|..++++|+.|.|||+.|++||+.+++.|... .+++.|||||+.||+|||+.+++.++. .++.+++.|+|+++|.|
T Consensus 1 ~N~~~~~qG~~D~pLTe~G~~QA~~l~~~L~~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~~ 80 (236)
T PTZ00123 1 WNKENRFTGWTDVPLSEKGVQEAREAGKLLKEKGFRFDVVYTSVLKRAIKTAWIVLEELGQLHVPVIKSWRLNERHYGAL 80 (236)
T ss_pred CcccCceeCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCceeCchhhhcccccc
Confidence 577888999999999999999999999999643 689999999999999999999987752 46788999999999999
Q ss_pred CCCCHHHHHhhChHHHHHhhcCCCCC------------------------CCCCCCCCHHHHHHHHHHHHHHHHHh--CC
Q 024700 170 QGLVFREAAKVCPIAYQAFLSGKTDQ------------------------DIPGGGESLDQLYRRCTSALQRIARK--HI 223 (264)
Q Consensus 170 ~g~~~~e~~~~~~~~~~~~~~~~~~~------------------------~~p~~gEs~~~~~~R~~~~l~~l~~~--~~ 223 (264)
+|++.+++.+.+|+.+..++...... ..+++|||+.++..|+.++++++... .+
T Consensus 81 EG~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~~Rv~~~l~~li~~~~~~ 160 (236)
T PTZ00123 81 QGLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTVERVLPYWEDHIAPDILA 160 (236)
T ss_pred cCCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999998644333222111 01248999999999999999986532 35
Q ss_pred CCeEEEEechHHHHHHHHHhcCCCCCCCc-cccCCCC
Q 024700 224 GERIVVVTHGGVIRTLYQRACPNKKPEGF-LKSGFGG 259 (264)
Q Consensus 224 ~~~ilvVsHg~~i~~l~~~l~g~~~~~~~-~~~~~~~ 259 (264)
+++|||||||++|+++++++++.+....+ +..+.|+
T Consensus 161 ~~~vliVsHG~vir~ll~~l~~~~~~~~~~~~~~n~~ 197 (236)
T PTZ00123 161 GKKVLVAAHGNSLRALVKYLDKMSEEDILELNIPTGV 197 (236)
T ss_pred CCeEEEEeCHHHHHHHHHHHhCCCHHHHhhccCCCCc
Confidence 78999999999999999999999887544 3444443
No 24
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.93 E-value=4.2e-25 Score=195.91 Aligned_cols=143 Identities=32% Similarity=0.401 Sum_probs=110.3
Q ss_pred eEEEEEecCCCCCccCCcccCCCCCC---CCHhhHHHHHHHHHHHhhh-------CCccEEEECChHHHHHHHHHHHHHc
Q 024700 81 CEIIVVRHGETPWNVQGKIQGHLDVE---LNEVGREQAVSVAERLAKE-------FKISVIYSSDLKRALETAQTIANRC 150 (264)
Q Consensus 81 ~~i~LiRHGes~~n~~~~~~g~~D~p---LT~~G~~QA~~~~~~L~~~-------~~~~~i~sSpl~Ra~qTA~~i~~~~ 150 (264)
++||||||||+.++ +..|.+ ||+.|++||+.+++.|+.. ..++.|||||+.||+|||+.|++.+
T Consensus 103 ~~L~LVRHGq~~~~------~~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~~ 176 (299)
T PTZ00122 103 RQIILVRHGQYINE------SSNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEAF 176 (299)
T ss_pred eEEEEEECCCCCCC------CCCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHhC
Confidence 99999999996543 233544 9999999999999999653 1899999999999999999999877
Q ss_pred CCccEEECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCC---CCeE
Q 024700 151 GGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHI---GERI 227 (264)
Q Consensus 151 ~~~~v~~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~---~~~i 227 (264)
+..++.++++|+|.. +..+ .| . .....|+++|+ .+..+|+.++++++..+.. ++.+
T Consensus 177 ~~~~v~~d~~LrEG~-------~~~~----~~--------~-~~~~~~~gee~-~~~~~Rv~~al~~i~~r~~~~~~~~v 235 (299)
T PTZ00122 177 PGVRLIEDPNLAEGV-------PCAP----DP--------P-SRGFKPTIEEI-LEDMKRIEAAFEKYFHRPVEDEDSVE 235 (299)
T ss_pred CCCCceeCcccccCC-------cccc----Cc--------c-ccccCCCcchH-HHHHHHHHHHHHHHHHhcccCCCCeE
Confidence 558899999999921 1110 01 0 01122324454 6679999999999886542 3568
Q ss_pred EEEechHHHHHHHHHhcCCCCCC
Q 024700 228 VVVTHGGVIRTLYQRACPNKKPE 250 (264)
Q Consensus 228 lvVsHg~~i~~l~~~l~g~~~~~ 250 (264)
||||||++|++++++++|.+...
T Consensus 236 LVVsHGgvIR~ll~~lLglp~~~ 258 (299)
T PTZ00122 236 IIVCHGNVIRYLVCRALQLPPEA 258 (299)
T ss_pred EEEeCChHHHHHHHHHhCcCHHH
Confidence 99999999999999999988764
No 25
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.93 E-value=5.2e-25 Score=176.89 Aligned_cols=124 Identities=43% Similarity=0.680 Sum_probs=109.4
Q ss_pred EEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCCccEEECCC
Q 024700 82 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGLKVIEDPE 160 (264)
Q Consensus 82 ~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~~ 160 (264)
+|||||||++.++......++.|.+||+.|++||+.+++.|... ..++.|||||+.||+|||+.+++.+...++.+++.
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~~Sp~~Ra~qTa~~l~~~~~~~~~~~~~~ 80 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQGWTDVPLTEKGREQARALGKRLKELGIKFDRIYSSPLKRAIQTAEIILEELPGLPVEVDPR 80 (153)
T ss_pred CEEEEECCCCcccccCcccCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECcHHHHHHHHHHHHHhcCCCCceeCcc
Confidence 48999999999988776677889999999999999999999543 48999999999999999999999873267888888
Q ss_pred ccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHH
Q 024700 161 LRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLY 240 (264)
Q Consensus 161 L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~ 240 (264)
|+| .|+.++++.+.+.+++++|+||||+++|+.++
T Consensus 81 L~e---------------------------------------------~R~~~~~~~l~~~~~~~~iliV~H~~~i~~~~ 115 (153)
T cd07067 81 LRE---------------------------------------------ARVLPALEELIAPHDGKNVLIVSHGGVLRALL 115 (153)
T ss_pred chH---------------------------------------------HHHHHHHHHHHHhCCCCeEEEEeChHHHHHHH
Confidence 888 78999999988866678999999999999999
Q ss_pred HHhcCCCCCC
Q 024700 241 QRACPNKKPE 250 (264)
Q Consensus 241 ~~l~g~~~~~ 250 (264)
+++++.+...
T Consensus 116 ~~l~~~~~~~ 125 (153)
T cd07067 116 AYLLGLSDED 125 (153)
T ss_pred HHHhCCCHHH
Confidence 9999987653
No 26
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.89 E-value=4.1e-22 Score=159.31 Aligned_cols=120 Identities=38% Similarity=0.532 Sum_probs=102.0
Q ss_pred EEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcC-CccEEECC
Q 024700 82 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCG-GLKVIEDP 159 (264)
Q Consensus 82 ~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~-~~~v~~~~ 159 (264)
+|||||||++.++..+.+.++.|.+||+.|++||+.+++.|... ..++.|||||+.||+|||+.+++.++ ..++.+.+
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~l~~~l~~~~~~~~~v~sSp~~R~~~Ta~~~~~~~~~~~~~~~~~ 80 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTGWGDGPLTEKGRQQARELGKALRERYIKFDRIYSSPLKRAIQTAEIILEGLFEGLPVEVDP 80 (153)
T ss_pred CEEEEeCCCCccccCCCccCCCCCCcCHHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHHHHHHhcCCCCeEECH
Confidence 48999999999988877778889999999999999999999554 38999999999999999999998862 13443332
Q ss_pred CccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC--CCCeEEEEechHHHH
Q 024700 160 ELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKH--IGERIVVVTHGGVIR 237 (264)
Q Consensus 160 ~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~--~~~~ilvVsHg~~i~ 237 (264)
. .|+.+++..+.... .++++++|||+++|+
T Consensus 81 ~------------------------------------------------~r~~~~~~~~~~~~~~~~~~iliv~H~~~i~ 112 (153)
T cd07040 81 R------------------------------------------------ARVLNALLELLARHLLDGKNVLIVSHGGTIR 112 (153)
T ss_pred H------------------------------------------------HHHHHHHHHHHHhhCCCCCEEEEEeCCHHHH
Confidence 2 88888888888764 568999999999999
Q ss_pred HHHHHhcCCCCC
Q 024700 238 TLYQRACPNKKP 249 (264)
Q Consensus 238 ~l~~~l~g~~~~ 249 (264)
.+++++++.+..
T Consensus 113 ~~~~~l~~~~~~ 124 (153)
T cd07040 113 ALLAALLGLSDE 124 (153)
T ss_pred HHHHHHhCcCHH
Confidence 999999998764
No 27
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.88 E-value=4.7e-22 Score=163.01 Aligned_cols=167 Identities=25% Similarity=0.335 Sum_probs=131.9
Q ss_pred CCceEEEEEecCCCCCccCCccc-------CCCCCCCCHhhHHHHHHHHHHHhhh-C--CccEEEECChHHHHHHHHHHH
Q 024700 78 PDYCEIIVVRHGETPWNVQGKIQ-------GHLDVELNEVGREQAVSVAERLAKE-F--KISVIYSSDLKRALETAQTIA 147 (264)
Q Consensus 78 ~~~~~i~LiRHGes~~n~~~~~~-------g~~D~pLT~~G~~QA~~~~~~L~~~-~--~~~~i~sSpl~Ra~qTA~~i~ 147 (264)
...|.||||||||..||..+.-. .+.|+-||++|++|+..++..+... . .++.|++|||+||+||+...+
T Consensus 12 ~r~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f 91 (248)
T KOG4754|consen 12 NRCKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAF 91 (248)
T ss_pred CcceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHh
Confidence 45799999999999999875421 2349999999999999999998544 3 499999999999999999999
Q ss_pred HHcC------CccEEECCCc----cccccCCCC---CCCHHHHHhhChH-HHHHhhcCCCCCCCCCCCCCHHHHHHHHHH
Q 024700 148 NRCG------GLKVIEDPEL----RERHLGDLQ---GLVFREAAKVCPI-AYQAFLSGKTDQDIPGGGESLDQLYRRCTS 213 (264)
Q Consensus 148 ~~~~------~~~v~~~~~L----~E~~~G~~~---g~~~~e~~~~~~~-~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~ 213 (264)
.+.. ..++.+.|.+ +|- .|.+. +.+..++.+.||. .|.....+....+.|...|..++...|-++
T Consensus 92 ~~~~~e~g~~~~p~~vsp~~i~~~rE~-lG~hpCD~r~~v~~~~~lfp~~DFs~~~~dv~~~~~pdy~ed~e~~a~r~re 170 (248)
T KOG4754|consen 92 GGYLAEDGEDPAPVKVSPPFIAVCRET-LGDHPCDRRSSVTDLMKLFPAYDFSLCETDVDPLKKPDYREDDEESAARSRE 170 (248)
T ss_pred cceeccCCCcCCceeecchHHHHHHHH-hCCCcccccchhHHHHhhcccccceeeccCcchhccCcchhhHHHHHHhHHH
Confidence 8652 1567788888 772 34443 5678888888886 344444444444555567999999999999
Q ss_pred HHHHHHHhCCCCeEEEEechHHHHHHHHHhcCC
Q 024700 214 ALQRIARKHIGERIVVVTHGGVIRTLYQRACPN 246 (264)
Q Consensus 214 ~l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~g~ 246 (264)
+++++.++ +.+.|.||||+++|+.++..+..-
T Consensus 171 ~~~~l~~r-~ek~iavvths~fl~~llk~i~k~ 202 (248)
T KOG4754|consen 171 FLEWLAKR-PEKEIAVVTHSGFLRSLLKKIQKD 202 (248)
T ss_pred HHHHHHhC-ccceEEEEEehHHHHHHHHHhccc
Confidence 99999987 677899999999999988877553
No 28
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2.6e-20 Score=168.71 Aligned_cols=163 Identities=28% Similarity=0.394 Sum_probs=145.0
Q ss_pred CCceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhhCCcc-EEEECChHHHHHHHHHHHHHcCCccEE
Q 024700 78 PDYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKIS-VIYSSDLKRALETAQTIANRCGGLKVI 156 (264)
Q Consensus 78 ~~~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~~~~~-~i~sSpl~Ra~qTA~~i~~~~~~~~v~ 156 (264)
...+.|||+||||++.|..++..| |.+|++.|.+-|+.+.+++.+....+ .|+||++.||+|||+.+... ..+.
T Consensus 237 ~~pR~i~l~r~geS~~n~~grigg--ds~ls~~g~~ya~~l~~f~~~~~~~dl~vwts~~~rti~ta~~l~~~---~~~~ 311 (438)
T KOG0234|consen 237 TTPRTIYLTRHGESEFNVEGRIGG--DSPLSERGSQYAKSLIKFVEEQSSSDLDVWTSQRKRTIQTAEGLKLD---YSVE 311 (438)
T ss_pred cCCceEEEEecCCCccccccccCC--cccccHHHHHHHHHHHHHHhhhcccCceeccchHHHHhhhHhhcCcc---hhhh
Confidence 345899999999999999988777 99999999999999999997776666 99999999999999944211 1246
Q ss_pred ECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHH
Q 024700 157 EDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVI 236 (264)
Q Consensus 157 ~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i 236 (264)
....|+|++.|.++|++.+++.+.+|+++.....++..+.+| +||++.++..|++..+-++..+ .+|+||||..+|
T Consensus 312 ~~~~Ldei~ag~~~g~t~eeI~~~~p~e~~~r~~dky~yry~-~gESy~D~v~RlePvImElEr~---~~Vlvi~Hqavi 387 (438)
T KOG0234|consen 312 QWKALDEIDAGVCEGLTYEEIETNYPEEFALRDKDKYRYRYP-GGESYSDLVQRLEPVIMELERQ---ENVLVITHQAVI 387 (438)
T ss_pred hHhhcCcccccccccccHHHHHHhCchhhhhccCCcceeecC-CCCCHHHHHHhhhhHhHhhhhc---ccEEEEecHHHH
Confidence 677899999999999999999999999999999999999999 9999999999999999998875 349999999999
Q ss_pred HHHHHHhcCCCCC
Q 024700 237 RTLYQRACPNKKP 249 (264)
Q Consensus 237 ~~l~~~l~g~~~~ 249 (264)
++++.++++.++.
T Consensus 388 rcll~Yf~~~~~~ 400 (438)
T KOG0234|consen 388 RCLLAYFLNCSPV 400 (438)
T ss_pred HHHHHHHhcCCHh
Confidence 9999999999965
No 29
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.83 E-value=2.6e-19 Score=144.18 Aligned_cols=120 Identities=19% Similarity=0.271 Sum_probs=90.3
Q ss_pred eEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC-ccEEEC
Q 024700 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG-LKVIED 158 (264)
Q Consensus 81 ~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~-~~v~~~ 158 (264)
|+|||||||++.++.. ++.|.+||+.|++||+.++++|... ..++.|||||+.||+|||+.+++.++. ..+...
T Consensus 1 m~l~LvRHg~a~~~~~----~d~dr~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~~ 76 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA----SDSVRPLTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLNLPSSAEVL 76 (152)
T ss_pred CEEEEEeCCCcccccC----CCCCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcCCCcceEEc
Confidence 5899999999988754 5668999999999999999999654 678999999999999999999988762 112211
Q ss_pred CCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 024700 159 PELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (264)
Q Consensus 159 ~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~ 238 (264)
+.|. | +++..+ +..++..+... ..++|+||+|+..+..
T Consensus 77 ~~l~-----------------------------------p--~~~~~~----~~~~l~~~~~~-~~~~vliVgH~P~i~~ 114 (152)
T TIGR00249 77 EGLT-----------------------------------P--CGDIGL----VSDYLEALTNE-GVASVLLVSHLPLVGY 114 (152)
T ss_pred cCcC-----------------------------------C--CCCHHH----HHHHHHHHHhc-CCCEEEEEeCCCCHHH
Confidence 1111 1 122222 44444444432 4568999999999999
Q ss_pred HHHHhcCC
Q 024700 239 LYQRACPN 246 (264)
Q Consensus 239 l~~~l~g~ 246 (264)
++.++++.
T Consensus 115 l~~~l~~~ 122 (152)
T TIGR00249 115 LVAELCPG 122 (152)
T ss_pred HHHHHhCC
Confidence 99999985
No 30
>PRK06193 hypothetical protein; Provisional
Probab=99.83 E-value=1.4e-19 Score=151.73 Aligned_cols=140 Identities=21% Similarity=0.143 Sum_probs=104.9
Q ss_pred ceEEEEEecCCCCCccCCcccCCC-----CCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCCc
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHL-----DVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGL 153 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~-----D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~~ 153 (264)
..+|||||||++.+|..+.+.++. |.+||+.|++||+.+++.|+.. ..+|.|||||+.||+|||+.++...+ .
T Consensus 42 ~~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~~~~d~V~sSpl~Ra~qTA~il~~~~~-~ 120 (206)
T PRK06193 42 GGYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALAIPVGKVISSPYCRAWETAQLAFGRHE-K 120 (206)
T ss_pred CCEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhcccc-c
Confidence 489999999999888877766665 5799999999999999999654 68999999999999999999874321 1
Q ss_pred cEEECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEech
Q 024700 154 KVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHG 233 (264)
Q Consensus 154 ~v~~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg 233 (264)
.+.+++++ ...+ ..|+.+....|+.++++++.. +.++|+||+|+
T Consensus 121 ----~~~l~~~~-----------------------------~~~~-~~~~~~~y~~~l~~~I~~l~~--~~~~vLlVgHn 164 (206)
T PRK06193 121 ----EIRLNFLN-----------------------------SEPV-PAERNALLKAGLRPLLTTPPD--PGTNTVLVGHD 164 (206)
T ss_pred ----Cccccccc-----------------------------ccCC-ChhhHHHHHHHHHHHHhhCCC--CCCeEEEEeCc
Confidence 01111100 0011 357777888999999988763 66789999999
Q ss_pred HHHHHHHHHhcCCCCCCCccccC
Q 024700 234 GVIRTLYQRACPNKKPEGFLKSG 256 (264)
Q Consensus 234 ~~i~~l~~~l~g~~~~~~~~~~~ 256 (264)
..+..++.++.+...+..++..+
T Consensus 165 p~i~~l~g~~~~~~g~~~~~~~~ 187 (206)
T PRK06193 165 DNLEAATGIYPEPEGEAAVFEPL 187 (206)
T ss_pred hHHHHHhCCCCccCccEEEEEeC
Confidence 99999999887732333444443
No 31
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.80 E-value=1.5e-18 Score=140.78 Aligned_cols=121 Identities=19% Similarity=0.266 Sum_probs=88.1
Q ss_pred eEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC-ccEEEC
Q 024700 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG-LKVIED 158 (264)
Q Consensus 81 ~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~-~~v~~~ 158 (264)
|+|||||||++.++.. ++.|.|||+.|++||+.++++|... ..+|.|||||+.||+|||+.+++.++. ..+...
T Consensus 1 m~l~lvRHg~a~~~~~----~d~~rpLt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~~ 76 (159)
T PRK10848 1 MQVFIMRHGDAALDAA----SDSVRPLTTCGCDESRLMANWLKGQKVDIERVLVSPYLRAEQTLEVVGECLNLPASAEVL 76 (159)
T ss_pred CEEEEEeCCCCCCCCC----CCcCCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHHhCCCCceEEc
Confidence 5799999999988742 4557899999999999999999654 578999999999999999999987762 112222
Q ss_pred CCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 024700 159 PELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (264)
Q Consensus 159 ~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~ 238 (264)
+.|.+ + .+. ..+..+++.+.+ .+.++|+||+|...+..
T Consensus 77 ~~l~~------------------------------------~-~~~----~~~~~~l~~~~~-~~~~~vllVgH~P~l~~ 114 (159)
T PRK10848 77 PELTP------------------------------------C-GDV----GLVSAYLQALAN-EGVASVLVISHLPLVGY 114 (159)
T ss_pred cCCCC------------------------------------C-CCH----HHHHHHHHHHHh-cCCCeEEEEeCcCcHHH
Confidence 11111 1 111 123333444333 24579999999999999
Q ss_pred HHHHhcCCC
Q 024700 239 LYQRACPNK 247 (264)
Q Consensus 239 l~~~l~g~~ 247 (264)
++..+++..
T Consensus 115 l~~~L~~~~ 123 (159)
T PRK10848 115 LVAELCPGE 123 (159)
T ss_pred HHHHHhCCC
Confidence 999998753
No 32
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.80 E-value=9.4e-19 Score=145.57 Aligned_cols=128 Identities=18% Similarity=0.197 Sum_probs=94.0
Q ss_pred CCceEEEEEecCCCC-CccCCcccCCCCCCCCHhhHHHHHHHHHHHhhhCCccEEEECChHHHHHHHHHHHHHcCCccEE
Q 024700 78 PDYCEIIVVRHGETP-WNVQGKIQGHLDVELNEVGREQAVSVAERLAKEFKISVIYSSDLKRALETAQTIANRCGGLKVI 156 (264)
Q Consensus 78 ~~~~~i~LiRHGes~-~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~ 156 (264)
...++||||||||+. +.. + .....+.|||+.|++||+.++++|+.....|.|||||+.||+|||+.+++. .++.
T Consensus 52 ~~~~~L~LiRHGet~~~~~-~-~~~sD~RpLTerG~~qA~~lg~~L~~~~~~d~I~sSpa~Ra~qTAe~ia~~---~~v~ 126 (201)
T PRK15416 52 KQHPVVVLFRHAERCDRSD-N-QCLSDKTGITVKGTQDARELGKAFSADIPDYDLYSSNTVRTIQSATWFSAG---KKLT 126 (201)
T ss_pred cCCCEEEEEeCccccCccC-C-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCCHHHHHHHHHHhcC---CCcE
Confidence 345889999999983 321 1 111123699999999999999999654444899999999999999999862 4566
Q ss_pred ECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHH
Q 024700 157 EDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVI 236 (264)
Q Consensus 157 ~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i 236 (264)
+++.|.|++ .+...++..+..+.++++|+||+|+..+
T Consensus 127 ~~~~Lye~~-------------------------------------------~~~~~~i~~~i~~~~~~tVLIVGHnp~i 163 (201)
T PRK15416 127 VDKRLSDCG-------------------------------------------NGIYSAIKDLQRKSPDKNIVIFTHNHCL 163 (201)
T ss_pred ecHHHhhcC-------------------------------------------chhHHHHHHHHHhCCCCEEEEEeCchhH
Confidence 666666543 1223344455555566899999999999
Q ss_pred HHHHHHhcCCCCCCCcc
Q 024700 237 RTLYQRACPNKKPEGFL 253 (264)
Q Consensus 237 ~~l~~~l~g~~~~~~~~ 253 (264)
..+.....+.++...++
T Consensus 164 ~~La~~~~~~~~~~~~~ 180 (201)
T PRK15416 164 TYIAKDKRGVKFKPDYL 180 (201)
T ss_pred HHHHHHhcCCCCCCCce
Confidence 99999988888776553
No 33
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.79 E-value=2.1e-18 Score=148.40 Aligned_cols=169 Identities=25% Similarity=0.248 Sum_probs=127.3
Q ss_pred CceEEEEEecCCCCCccCCc------------cc-------------------CCCCCCCCHhhHHHHHHHHHHHhhh-C
Q 024700 79 DYCEIIVVRHGETPWNVQGK------------IQ-------------------GHLDVELNEVGREQAVSVAERLAKE-F 126 (264)
Q Consensus 79 ~~~~i~LiRHGes~~n~~~~------------~~-------------------g~~D~pLT~~G~~QA~~~~~~L~~~-~ 126 (264)
..+.|++|||||+..+.-+. +. ...|+|||..|.-|++..|+.|... .
T Consensus 11 ~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~~ 90 (272)
T KOG3734|consen 11 VPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAGI 90 (272)
T ss_pred CCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcCC
Confidence 35899999999998743211 00 0138999999999999999998555 8
Q ss_pred CccEEEECChHHHHHHHHHHHHHcCC---ccEEECCCccccccCCCCC-----CCHHHHHhhChHHHHHhhcCCCCCCCC
Q 024700 127 KISVIYSSDLKRALETAQTIANRCGG---LKVIEDPELRERHLGDLQG-----LVFREAAKVCPIAYQAFLSGKTDQDIP 198 (264)
Q Consensus 127 ~~~~i~sSpl~Ra~qTA~~i~~~~~~---~~v~~~~~L~E~~~G~~~g-----~~~~e~~~~~~~~~~~~~~~~~~~~~p 198 (264)
.++.||+||..||+|||..+.+.++. ..+.++|.|-|+..-.-.+ .+..++....+.-...+ ++.....+
T Consensus 91 ~i~~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~~~~~~~~~p~~is~~el~~~~~~VD~~y--~P~~~~~~ 168 (272)
T KOG3734|consen 91 AIDVIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPEKWPKDGKFPFFISPDELKFPGFPVDLNY--DPVYKETP 168 (272)
T ss_pred CcceeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchhhhcccCCCCCcCCHHHHhccCCCccccc--chhhhhcc
Confidence 99999999999999999999998883 7899999999985422222 23444443322110000 11111124
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcCCCCC
Q 024700 199 GGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACPNKKP 249 (264)
Q Consensus 199 ~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~g~~~~ 249 (264)
..+|+.+++..|+.+.+..|+.+.++++||||+||..+....+.+.|.+..
T Consensus 169 ~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l~~~~~~ 219 (272)
T KOG3734|consen 169 RWGESLEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQLQGLPVR 219 (272)
T ss_pred cccccHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHhcCCCce
Confidence 478999999999999999999999999999999999999999999885553
No 34
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.79 E-value=2.2e-18 Score=138.73 Aligned_cols=122 Identities=25% Similarity=0.345 Sum_probs=91.0
Q ss_pred ceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCCccEEEC
Q 024700 80 YCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGGLKVIED 158 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~ 158 (264)
||+|||+|||++.+...+ ..+.|.+||+.|++|++.+|++|+.. ..+|.|+|||+.||+|||+.+++.++..+++..
T Consensus 1 m~~L~LmRHgkA~~~~~~--~~D~dR~Lt~~G~~ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~~~~~~~~~~~~ 78 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPG--IADFDRPLTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVAEHLGEKKVEVF 78 (163)
T ss_pred CceEEEeecccccccCCC--CCCccCcCCHHHHHHHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHHHhhCcccceec
Confidence 689999999999987654 23558999999999999999999777 779999999999999999999998872111111
Q ss_pred CCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 024700 159 PELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (264)
Q Consensus 159 ~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~ 238 (264)
.| ..| ++. . ..+.+.++.+.+ .-..+++|+|...+..
T Consensus 79 ---~~--------------------------------l~p-~~d-~----~~~l~~l~~~~d--~v~~vllVgH~P~l~~ 115 (163)
T COG2062 79 ---EE--------------------------------LLP-NGD-P----GTVLDYLEALGD--GVGSVLLVGHNPLLEE 115 (163)
T ss_pred ---cc--------------------------------cCC-CCC-H----HHHHHHHHHhcc--cCceEEEECCCccHHH
Confidence 11 011 111 1 122333333333 3468999999999999
Q ss_pred HHHHhcCC
Q 024700 239 LYQRACPN 246 (264)
Q Consensus 239 l~~~l~g~ 246 (264)
++..+.+.
T Consensus 116 l~~~L~~~ 123 (163)
T COG2062 116 LALLLAGG 123 (163)
T ss_pred HHHHHccc
Confidence 99999996
No 35
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.77 E-value=1.8e-18 Score=142.17 Aligned_cols=146 Identities=29% Similarity=0.302 Sum_probs=106.7
Q ss_pred CceEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh-CCccEEEECChHHHHHHHHHHHHHcCC-ccEE
Q 024700 79 DYCEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE-FKISVIYSSDLKRALETAQTIANRCGG-LKVI 156 (264)
Q Consensus 79 ~~~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~-~~~~~i~sSpl~Ra~qTA~~i~~~~~~-~~v~ 156 (264)
..+.|+||||||.-. .|+.+ .||+.|++||+.+|++|... .++|.|+.|.|.||.+||.+|.++++. .+.+
T Consensus 93 atRhI~LiRHgeY~~------~g~~~-hLTelGReQAE~tGkRL~elglk~d~vv~StM~RA~ETadIIlk~l~d~lk~~ 165 (284)
T KOG4609|consen 93 ATRHIFLIRHGEYHV------DGSLE-HLTELGREQAELTGKRLAELGLKFDKVVASTMVRATETADIILKHLPDDLKRV 165 (284)
T ss_pred hhceEEEEeccceec------cCchh-hcchhhHHHHHHHhHHHHHcCCchhhhhhhhhhhhHHHHHHHHHhCCCcccee
Confidence 458999999999532 13223 79999999999999999777 999999999999999999999999973 5677
Q ss_pred ECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhC-----CCCeEEEEe
Q 024700 157 EDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKH-----IGERIVVVT 231 (264)
Q Consensus 157 ~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~-----~~~~ilvVs 231 (264)
-.+.|+|=. .+++.+. .+.| .| ..-.+..--.|++.++..++-+. ++...|||+
T Consensus 166 s~~ll~EGa--P~ppdPp----------~k~w--------rp-~~~qy~rdgaRIEaafRryfhRA~p~QeedSy~liV~ 224 (284)
T KOG4609|consen 166 SCPLLREGA--PYPPDPP----------VKHW--------RP-LDPQYYRDGARIEAAFRRYFHRASPSQEEDSYELIVC 224 (284)
T ss_pred cccccccCC--CCCCCCC----------cccC--------Cc-cChHhhhcchHHHHHHHHHHhhcCcccccccEEEEEe
Confidence 788888821 1111110 0111 11 11112233468888888766432 455789999
Q ss_pred chHHHHHHHHHhcCCCCCCCc
Q 024700 232 HGGVIRTLYQRACPNKKPEGF 252 (264)
Q Consensus 232 Hg~~i~~l~~~l~g~~~~~~~ 252 (264)
|+++|+.|+|..++.|++...
T Consensus 225 HaNVIRY~icRALq~PpegWl 245 (284)
T KOG4609|consen 225 HANVIRYFICRALQFPPEGWL 245 (284)
T ss_pred ecchhhhhhhhhhcCCcchhh
Confidence 999999999999999997533
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=98.07 E-value=9.1e-06 Score=69.98 Aligned_cols=60 Identities=28% Similarity=0.292 Sum_probs=50.6
Q ss_pred eEEEEEecCCCCCccCCcccCCCCCCCCHhhHHHHHHHHHHHhhh----C-------CccEEEECChHHHHHHHHHHHHH
Q 024700 81 CEIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAVSVAERLAKE----F-------KISVIYSSDLKRALETAQTIANR 149 (264)
Q Consensus 81 ~~i~LiRHGes~~n~~~~~~g~~D~pLT~~G~~QA~~~~~~L~~~----~-------~~~~i~sSpl~Ra~qTA~~i~~~ 149 (264)
+.++++|||++.- ..||..|++|+..+|+++.+. . ..-.+++|+..||+|||+.++.+
T Consensus 4 ~v~~~~RHg~r~p-----------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~g 72 (242)
T cd07061 4 QVQVLSRHGDRYP-----------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLAG 72 (242)
T ss_pred EEEEEEecCCCCc-----------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHHh
Confidence 6789999999742 479999999999999999654 1 22378999999999999999998
Q ss_pred cC
Q 024700 150 CG 151 (264)
Q Consensus 150 ~~ 151 (264)
+-
T Consensus 73 l~ 74 (242)
T cd07061 73 LF 74 (242)
T ss_pred cC
Confidence 74
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=97.14 E-value=0.00097 Score=59.64 Aligned_cols=46 Identities=22% Similarity=0.273 Sum_probs=38.7
Q ss_pred CCCHhhHHHHHHHHHHHhhh-C---------CccEEEECChHHHHHHHHHHHHHcC
Q 024700 106 ELNEVGREQAVSVAERLAKE-F---------KISVIYSSDLKRALETAQTIANRCG 151 (264)
Q Consensus 106 pLT~~G~~QA~~~~~~L~~~-~---------~~~~i~sSpl~Ra~qTA~~i~~~~~ 151 (264)
.||+.|.+|...+|+++.+. . .--.|++|...||++||+.++.++-
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 49999999999999999654 1 2236889999999999999998763
No 38
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=95.37 E-value=0.14 Score=47.94 Aligned_cols=71 Identities=14% Similarity=0.034 Sum_probs=48.2
Q ss_pred ceEEEEEecCCCCCccC----Cc--ccCCC-----CCCCCHhhHHHHHHHHHHHhhh-C-----------Ccc--EEEEC
Q 024700 80 YCEIIVVRHGETPWNVQ----GK--IQGHL-----DVELNEVGREQAVSVAERLAKE-F-----------KIS--VIYSS 134 (264)
Q Consensus 80 ~~~i~LiRHGes~~n~~----~~--~~g~~-----D~pLT~~G~~QA~~~~~~L~~~-~-----------~~~--~i~sS 134 (264)
.+.++|.|||.+.-... .. ...|. .-.||++|..|...+|+++.+. . ..+ .|+++
T Consensus 35 ~~Vvil~RHG~RaP~~~~~~~~~~t~~~w~~W~~~~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~ 114 (436)
T PRK10172 35 ESVVIVSRHGVRAPTKATQLMQDVTPDAWPQWPVKLGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIAD 114 (436)
T ss_pred EEEEEEeeCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeC
Confidence 37789999998642211 11 01121 2469999999999999987443 1 111 56678
Q ss_pred ChHHHHHHHHHHHHHc
Q 024700 135 DLKRALETAQTIANRC 150 (264)
Q Consensus 135 pl~Ra~qTA~~i~~~~ 150 (264)
+..|++.||+.++.++
T Consensus 115 ~~~RTi~SAqafl~Gl 130 (436)
T PRK10172 115 VDQRTRKTGEAFLAGL 130 (436)
T ss_pred CchHHHHHHHHHHHhc
Confidence 8899999999888765
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=94.98 E-value=0.14 Score=47.83 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=48.7
Q ss_pred eEEEEEecCCCCCccCC----------cccCCC--CCCCCHhhHHHHHHHHHHHhhh------C------C--ccEEEEC
Q 024700 81 CEIIVVRHGETPWNVQG----------KIQGHL--DVELNEVGREQAVSVAERLAKE------F------K--ISVIYSS 134 (264)
Q Consensus 81 ~~i~LiRHGes~~n~~~----------~~~g~~--D~pLT~~G~~QA~~~~~~L~~~------~------~--~~~i~sS 134 (264)
+.++|.|||-+.--... .+..|. .-.||.+|..+-..+|+++.+. . . .-.++++
T Consensus 33 ~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~ 112 (413)
T PRK10173 33 QVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYAN 112 (413)
T ss_pred EEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeC
Confidence 78999999986432211 111121 3469999999988898876332 1 1 1367899
Q ss_pred ChHHHHHHHHHHHHHc
Q 024700 135 DLKRALETAQTIANRC 150 (264)
Q Consensus 135 pl~Ra~qTA~~i~~~~ 150 (264)
+..|+++||+.++.++
T Consensus 113 ~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 113 SLQRTVATAQFFITGA 128 (413)
T ss_pred CchHHHHHHHHHHHhc
Confidence 9999999999998765
No 40
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=94.86 E-value=0.12 Score=48.21 Aligned_cols=71 Identities=23% Similarity=0.262 Sum_probs=50.6
Q ss_pred ceEEEEEecCCCCC-cc--C-Cccc-----CCCCCCCCHhhHHHHHHHHHHHhh---hCC--------c--cEEEECChH
Q 024700 80 YCEIIVVRHGETPW-NV--Q-GKIQ-----GHLDVELNEVGREQAVSVAERLAK---EFK--------I--SVIYSSDLK 137 (264)
Q Consensus 80 ~~~i~LiRHGes~~-n~--~-~~~~-----g~~D~pLT~~G~~QA~~~~~~L~~---~~~--------~--~~i~sSpl~ 137 (264)
...-.+.|||...- +. . ..+. +.---.||+.|.+|+..+|+.|++ ... . -.|.||+.-
T Consensus 35 efv~~i~RHGdRaP~~~~yp~dp~~~~~~~~~G~GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~n 114 (411)
T KOG3720|consen 35 EFVQVIFRHGDRAPVDTPYPLDPFKEEDFWPRGWGQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVN 114 (411)
T ss_pred EEEEEEeecCCCCcccCCCCCCcccccccCCCCcchhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCcc
Confidence 47778899998752 11 1 1111 111236999999999999999977 311 1 166799999
Q ss_pred HHHHHHHHHHHHc
Q 024700 138 RALETAQTIANRC 150 (264)
Q Consensus 138 Ra~qTA~~i~~~~ 150 (264)
||+.||+.++.++
T Consensus 115 Rtl~SAqs~laGl 127 (411)
T KOG3720|consen 115 RTLMSAQSVLAGL 127 (411)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999876
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=93.25 E-value=0.29 Score=48.37 Aligned_cols=45 Identities=31% Similarity=0.350 Sum_probs=38.4
Q ss_pred CCCHhhHHHHHHHHHHHhhhCC----------------ccEEEECChHHHHHHHHHHHHHc
Q 024700 106 ELNEVGREQAVSVAERLAKEFK----------------ISVIYSSDLKRALETAQTIANRC 150 (264)
Q Consensus 106 pLT~~G~~QA~~~~~~L~~~~~----------------~~~i~sSpl~Ra~qTA~~i~~~~ 150 (264)
.||..|+.||+++|+.+..... -=.||+|.-.|.+.||+.+++++
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 3999999999999999854422 22899999999999999999976
No 42
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=84.37 E-value=4.5 Score=38.04 Aligned_cols=48 Identities=23% Similarity=0.203 Sum_probs=38.5
Q ss_pred CCCCCHhhHHHHHHHHHHHhhh------CCccEEEECChHHHHHHHHHHHHHcC
Q 024700 104 DVELNEVGREQAVSVAERLAKE------FKISVIYSSDLKRALETAQTIANRCG 151 (264)
Q Consensus 104 D~pLT~~G~~QA~~~~~~L~~~------~~~~~i~sSpl~Ra~qTA~~i~~~~~ 151 (264)
+.-|...|+..|.+.++++... ...-.|+++-..||.+||+.++.++.
T Consensus 130 ~~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLf 183 (467)
T KOG1382|consen 130 VDQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLF 183 (467)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhc
Confidence 3457788899999998887543 33447889999999999999999875
No 43
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=74.61 E-value=12 Score=34.56 Aligned_cols=42 Identities=12% Similarity=0.225 Sum_probs=33.3
Q ss_pred CCHhhHHHHHHHHHHHhhh------------CCcc--EEEECChHHHHHHHHHHHH
Q 024700 107 LNEVGREQAVSVAERLAKE------------FKIS--VIYSSDLKRALETAQTIAN 148 (264)
Q Consensus 107 LT~~G~~QA~~~~~~L~~~------------~~~~--~i~sSpl~Ra~qTA~~i~~ 148 (264)
||.+|..|-..+|+.+... ...+ .|+|+-+.|+.|+|-.+.=
T Consensus 169 LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf 224 (487)
T KOG3672|consen 169 LTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLF 224 (487)
T ss_pred eeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHH
Confidence 8999999999999987422 1112 5899999999999988854
No 44
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=71.87 E-value=29 Score=31.26 Aligned_cols=121 Identities=20% Similarity=0.103 Sum_probs=70.9
Q ss_pred cEEEECChHHHHHHHHHHHHHcCCccEEECCCccccccCCCCCCCHHHHHhhChH-------------HHHHhhcCCCCC
Q 024700 129 SVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPI-------------AYQAFLSGKTDQ 195 (264)
Q Consensus 129 ~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~~L~E~~~G~~~g~~~~e~~~~~~~-------------~~~~~~~~~~~~ 195 (264)
..|+.|+-.=-+-+|..+++.++ .++.+.| .|.+.....+++.+..|+ .|..-..+..-.
T Consensus 30 ~VIlvsDn~aD~~lA~~iaellN-A~Vlttp------wg~ynes~~~eI~~lnpd~VLIIGGp~AVs~~yE~~Lks~Git 102 (337)
T COG2247 30 VVILVSDNEADLLLALPIAELLN-APVLTTP------WGIYNESVLDEIIELNPDLVLIIGGPIAVSPNYENALKSLGIT 102 (337)
T ss_pred EEEEecchHHHHHHhhHHHHHhC-CeeEecC------cccccHHHHHHHHhhCCceEEEECCCCcCChhHHHHHHhCCcE
Confidence 68889998888899999999998 6666665 233333334455554443 222222211110
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcCCCCCCCccccC
Q 024700 196 DIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACPNKKPEGFLKSG 256 (264)
Q Consensus 196 ~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~g~~~~~~~~~~~ 256 (264)
-..-+|.+..+...++..++.+-....-+...++|.||.-...-+..++....-..++.++
T Consensus 103 V~RigG~nR~ETa~~v~~~~~~~yp~af~n~kvvvv~GwDy~~~~~e~~k~~~~p~~~~n~ 163 (337)
T COG2247 103 VKRIGGANRYETAEKVAKFFREDYPNAFKNVKVVVVYGWDYADALMELMKEGIVPVILKNT 163 (337)
T ss_pred EEEecCcchHHHHHHHHHHHHhhchhhhcCeEEEEEeccccHHHHHHHHhcCcceeEeccc
Confidence 0112688888899999888875443323335688889866654444444444444444443
No 45
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=59.79 E-value=8.3 Score=31.75 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEech
Q 024700 204 LDQLYRRCTSALQRIARKHIGERIVVVTHG 233 (264)
Q Consensus 204 ~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg 233 (264)
.+++..|+..|++.|.+.+++..||+|+|-
T Consensus 73 ~~~~~~~~~~fv~~iR~~hP~tPIllv~~~ 102 (178)
T PF14606_consen 73 PEEFRERLDGFVKTIREAHPDTPILLVSPI 102 (178)
T ss_dssp TTTHHHHHHHHHHHHHTT-SSS-EEEEE--
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEecC
Confidence 347889999999999999999999999974
No 46
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=52.57 E-value=35 Score=30.53 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcCCCCC
Q 024700 205 DQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACPNKKP 249 (264)
Q Consensus 205 ~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~g~~~~ 249 (264)
..+..|+.+.+..+.+ +++++||||+||.--..++.++...+..
T Consensus 174 ~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred HHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCc
Confidence 3445566666654444 4677799999999998888888777764
No 47
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=45.32 E-value=82 Score=23.70 Aligned_cols=41 Identities=24% Similarity=0.368 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEech--HHHHHHHHHhcCC
Q 024700 206 QLYRRCTSALQRIARKHIGERIVVVTHG--GVIRTLYQRACPN 246 (264)
Q Consensus 206 ~~~~R~~~~l~~l~~~~~~~~ilvVsHg--~~i~~l~~~l~g~ 246 (264)
.....+.+.+.++.+++++..|+|++|. |.+..++...+..
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhh
Confidence 4556777888888888777899999995 6666666655443
No 48
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=35.60 E-value=26 Score=31.02 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=20.4
Q ss_pred EECChHHHHHHHHHHHHHcCCccEEEC
Q 024700 132 YSSDLKRALETAQTIANRCGGLKVIED 158 (264)
Q Consensus 132 ~sSpl~Ra~qTA~~i~~~~~~~~v~~~ 158 (264)
||--..||+++++...+.++ .++-+.
T Consensus 12 FCaGV~RAI~ive~al~~~g-~pIyv~ 37 (294)
T COG0761 12 FCAGVDRAIQIVERALEEYG-APIYVR 37 (294)
T ss_pred cchhHHHHHHHHHHHHHHcC-CCeEEE
Confidence 56667899999999999988 555443
No 49
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=35.46 E-value=77 Score=26.81 Aligned_cols=38 Identities=16% Similarity=0.018 Sum_probs=27.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 024700 201 GESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (264)
Q Consensus 201 gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~ 238 (264)
++...+..++..+++++.+++..++.+|+|+|-.....
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~ 178 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRD 178 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHH
Confidence 45566677777788877666666678999999765543
No 50
>PF04198 Sugar-bind: Putative sugar-binding domain; InterPro: IPR007324 This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. One of these proteins, Q8U7I7 from SWISSPROT, has an N-terminal helix-turn-helix IPR000792 from INTERPRO that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.; GO: 0030246 carbohydrate binding; PDB: 3KV1_A 3EFB_C 2W48_A 3BXH_A 3BXE_A 2OKG_A 3BXF_A 3BXG_A 2R5F_A 2O0M_A ....
Probab=34.00 E-value=2.5e+02 Score=24.19 Aligned_cols=77 Identities=18% Similarity=0.277 Sum_probs=45.3
Q ss_pred ChHHHHHHHHHHHHHcCCccEEECCCccccccCCCCCCCHHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHH
Q 024700 135 DLKRALETAQTIANRCGGLKVIEDPELRERHLGDLQGLVFREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSA 214 (264)
Q Consensus 135 pl~Ra~qTA~~i~~~~~~~~v~~~~~L~E~~~G~~~g~~~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~ 214 (264)
|+.++.+-.+.+.+.++...+.+.+.-.+ ..+....+.+.+.++
T Consensus 2 p~~~~~~Le~~L~~~fgLk~~~Vv~~~~~------------------------------------~~~~~~~l~~~aA~~ 45 (255)
T PF04198_consen 2 PLSRNSELEEELKEKFGLKEVIVVPSPSD------------------------------------DEDILESLGEAAAEY 45 (255)
T ss_dssp THHHHHHHHHHHHHHHTSSEEEEESSSTT------------------------------------THHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhCCCEEEEecCCCC------------------------------------hHHHHHHHHHHHHHH
Confidence 56777777778877777555555432111 112233444555555
Q ss_pred HHHHHHhCCCCeEEEEechHHHHHHHHHhcCCCCCC
Q 024700 215 LQRIARKHIGERIVVVTHGGVIRTLYQRACPNKKPE 250 (264)
Q Consensus 215 l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~g~~~~~ 250 (264)
+..+++ +..+|=|+-|.++..++.++......+
T Consensus 46 L~~~l~---~~~~iGv~wG~Tl~~~~~~l~~~~~~~ 78 (255)
T PF04198_consen 46 LSELLK---DGDVIGVGWGRTLYAVANHLPPKSLPN 78 (255)
T ss_dssp HHHH-----TTEEEEE-TSHHHHHHHHTS--SSSSC
T ss_pred HHHhCC---CCCEEEEcchHHHHHHHHhcCccCCCC
Confidence 665555 356899999999999999988855543
No 51
>PRK04946 hypothetical protein; Provisional
Probab=32.95 E-value=1.7e+02 Score=24.19 Aligned_cols=48 Identities=10% Similarity=0.014 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEech---HHHHHHHHHhcCCCCC
Q 024700 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHG---GVIRTLYQRACPNKKP 249 (264)
Q Consensus 200 ~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg---~~i~~l~~~l~g~~~~ 249 (264)
.|-+.++....+..|++.-.. .+...|.|-|| ++++..+..+|...+.
T Consensus 101 hG~~~eeA~~~L~~fl~~a~~--~g~r~v~IIHGkG~gvLk~~V~~wL~q~~~ 151 (181)
T PRK04946 101 HGLTQLQAKQELGALIAACRK--EHVFCACVMHGHGKHILKQQTPLWLAQHPD 151 (181)
T ss_pred CCCCHHHHHHHHHHHHHHHHH--cCCCEEEEEcCCCHhHHHHHHHHHHcCCch
Confidence 478899999999999987555 34556677799 9999999999976554
No 52
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=31.06 E-value=84 Score=26.62 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=21.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHhC-----CCCeEEEEech
Q 024700 201 GESLDQLYRRCTSALQRIARKH-----IGERIVVVTHG 233 (264)
Q Consensus 201 gEs~~~~~~R~~~~l~~l~~~~-----~~~~ilvVsHg 233 (264)
++.+.+..+-+.+.++.+.+.+ +.+.|++|+|.
T Consensus 56 g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHS 93 (225)
T PF07819_consen 56 GRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHS 93 (225)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEc
Confidence 4555555555555555555443 67889999996
No 53
>COG2344 AT-rich DNA-binding protein [General function prediction only]
Probab=30.16 E-value=41 Score=28.14 Aligned_cols=36 Identities=11% Similarity=0.170 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcC
Q 024700 210 RCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACP 245 (264)
Q Consensus 210 R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~g 245 (264)
-+..++.+++......+++||+=|+.-++++.+-.-
T Consensus 70 ~L~~ff~~~Lg~~~~tnviiVG~GnlG~All~Y~f~ 105 (211)
T COG2344 70 YLRDFFDDLLGQDKTTNVIIVGVGNLGRALLNYNFS 105 (211)
T ss_pred HHHHHHHHHhCCCcceeEEEEccChHHHHHhcCcch
Confidence 355677777776666789999999999999877543
No 54
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=29.78 E-value=1.2e+02 Score=30.13 Aligned_cols=43 Identities=26% Similarity=0.314 Sum_probs=32.3
Q ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechH
Q 024700 192 KTDQDIP-GGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGG 234 (264)
Q Consensus 192 ~~~~~~p-~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~ 234 (264)
+.+++.. ...|...+...|+++.++.+.+...++.|+||+|..
T Consensus 179 PYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSM 222 (642)
T PLN02517 179 AYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSM 222 (642)
T ss_pred ccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 4444443 234667888899999999988876678999999973
No 55
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=29.59 E-value=71 Score=29.53 Aligned_cols=40 Identities=20% Similarity=0.425 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEech---HHHHHHHHHh
Q 024700 203 SLDQLYRRCTSALQRIARKHIGERIVVVTHG---GVIRTLYQRA 243 (264)
Q Consensus 203 s~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg---~~i~~l~~~l 243 (264)
...+...++++.++...+.. ++.|+||+|. .+++.++...
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhc
Confidence 45677888888888887765 8899999996 3444444444
No 56
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=29.00 E-value=1.2e+02 Score=25.86 Aligned_cols=46 Identities=22% Similarity=0.081 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcC
Q 024700 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACP 245 (264)
Q Consensus 200 ~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~g 245 (264)
..++.......+.+++..|.+....++|-|++|..=-+.++..+..
T Consensus 68 d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 68 DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHH
Confidence 3456666777788888888876678899999998766666655533
No 57
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=28.98 E-value=59 Score=31.55 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEech-HHHHHHHHHhcCCCCC
Q 024700 202 ESLDQLYRRCTSALQRIARKHIGERIVVVTHG-GVIRTLYQRACPNKKP 249 (264)
Q Consensus 202 Es~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg-~~i~~l~~~l~g~~~~ 249 (264)
|+-...-.-...|+...+..+++ .+|||||. .++..++.++.-.+.-
T Consensus 179 EPTNHLD~~~i~WLe~~L~~~~g-tviiVSHDR~FLd~V~t~I~~ld~g 226 (530)
T COG0488 179 EPTNHLDLESIEWLEDYLKRYPG-TVIVVSHDRYFLDNVATHILELDRG 226 (530)
T ss_pred CCCcccCHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHhhheEEecCC
Confidence 44455556677888888887777 89999998 6777777776655553
No 58
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=28.85 E-value=1.2e+02 Score=25.89 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHH
Q 024700 206 QLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLY 240 (264)
Q Consensus 206 ~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~ 240 (264)
+-...+...+..+.++ .+..||+|||...+....
T Consensus 176 ~t~~~V~~ll~~~~~~-~g~tii~VTHd~~lA~~~ 209 (226)
T COG1136 176 KTAKEVLELLRELNKE-RGKTIIMVTHDPELAKYA 209 (226)
T ss_pred HHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHhC
Confidence 3455666666666654 477999999998876543
No 59
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=28.78 E-value=1.1e+02 Score=29.10 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=33.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhc
Q 024700 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRAC 244 (264)
Q Consensus 200 ~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~ 244 (264)
.-|-.++...++++.++...+.+.++.|+||+|..=.-.+++.+.
T Consensus 157 ~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~ 201 (473)
T KOG2369|consen 157 NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLK 201 (473)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHh
Confidence 346778888899999988888777799999999754444444333
No 60
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=28.48 E-value=98 Score=26.91 Aligned_cols=28 Identities=25% Similarity=0.495 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEechH
Q 024700 205 DQLYRRCTSALQRIARKHIGERIVVVTHGG 234 (264)
Q Consensus 205 ~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~ 234 (264)
..|++++..-++++.++ +..||+|||..
T Consensus 180 ~~F~~K~~~rl~e~~~~--~~tiv~VSHd~ 207 (249)
T COG1134 180 AAFQEKCLERLNELVEK--NKTIVLVSHDL 207 (249)
T ss_pred HHHHHHHHHHHHHHHHc--CCEEEEEECCH
Confidence 46777888888887664 48999999984
No 61
>PRK00035 hemH ferrochelatase; Reviewed
Probab=27.95 E-value=4.4e+02 Score=23.55 Aligned_cols=20 Identities=35% Similarity=0.406 Sum_probs=15.0
Q ss_pred CCCCCHhhHHHHHHHHHHHh
Q 024700 104 DVELNEVGREQAVSVAERLA 123 (264)
Q Consensus 104 D~pLT~~G~~QA~~~~~~L~ 123 (264)
-+||...-++|++.+.+.|.
T Consensus 69 gSPl~~~t~~q~~~L~~~l~ 88 (333)
T PRK00035 69 GSPLNVITRRQAEALQAELA 88 (333)
T ss_pred CChhHHHHHHHHHHHHHHHh
Confidence 45777778888888887773
No 62
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=27.94 E-value=84 Score=28.01 Aligned_cols=32 Identities=25% Similarity=0.326 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEechH
Q 024700 203 SLDQLYRRCTSALQRIARKHIGERIVVVTHGG 234 (264)
Q Consensus 203 s~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~ 234 (264)
+.+....-++...+.|..-..+.+-+|||||+
T Consensus 20 tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGN 51 (312)
T COG0549 20 TAEAQYEAVKITAEQIADLIASGYEVVITHGN 51 (312)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 56666666666666655433334679999994
No 63
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=27.43 E-value=1.6e+02 Score=22.79 Aligned_cols=43 Identities=16% Similarity=0.086 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEech--HHHHHHHHHhcCC
Q 024700 204 LDQLYRRCTSALQRIARKHIGERIVVVTHG--GVIRTLYQRACPN 246 (264)
Q Consensus 204 ~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg--~~i~~l~~~l~g~ 246 (264)
+..+...+.+.++....++++..|+|++|. +.+..++...+..
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHh
Confidence 344555566666665555678899999995 6666666665544
No 64
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=26.52 E-value=43 Score=29.40 Aligned_cols=37 Identities=27% Similarity=0.366 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHH
Q 024700 200 GGESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRT 238 (264)
Q Consensus 200 ~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~ 238 (264)
...+.++...++.+.++...+. ..+|++.+|||.|..
T Consensus 190 ~~~sl~~a~~~~~~i~~aa~~v--~~dii~l~hGGPI~~ 226 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDAARAV--NPDIIVLCHGGPIAT 226 (268)
T ss_dssp -S--HHHHHHHHHHHHHHHHCC---TT-EEEEECTTB-S
T ss_pred ccCCHHHHHHHHHHHHHHHHHh--CCCeEEEEeCCCCCC
Confidence 3578999999999988876553 456899999988753
No 65
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=25.31 E-value=80 Score=23.74 Aligned_cols=22 Identities=18% Similarity=0.298 Sum_probs=15.4
Q ss_pred eEEEEechHHHHHHHH---HhcCCC
Q 024700 226 RIVVVTHGGVIRTLYQ---RACPNK 247 (264)
Q Consensus 226 ~ilvVsHg~~i~~l~~---~l~g~~ 247 (264)
.|||+|||.+-..+.. .+.|..
T Consensus 3 ~ili~sHG~~A~gl~~s~~~i~G~~ 27 (116)
T TIGR00824 3 AIIISGHGQAAIALLKSAEMIFGEQ 27 (116)
T ss_pred EEEEEecHHHHHHHHHHHHHHcCCc
Confidence 5899999987666654 445543
No 66
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=25.25 E-value=1.3e+02 Score=24.71 Aligned_cols=59 Identities=25% Similarity=0.291 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEe--chHHH--HHHHHHhcCCCCCCCc-cccCCCCCCC
Q 024700 203 SLDQLYRRCTSALQRIARKHIGERIVVVT--HGGVI--RTLYQRACPNKKPEGF-LKSGFGGDST 262 (264)
Q Consensus 203 s~~~~~~R~~~~l~~l~~~~~~~~ilvVs--Hg~~i--~~l~~~l~g~~~~~~~-~~~~~~~~~~ 262 (264)
+.++..+|+++.-+++.+.+.+++.++|+ +|.++ .-|+ ..+..+.+-.| .-..||+..+
T Consensus 13 see~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~F~~dL~-r~i~~~~e~dFm~vSSYg~~t~ 76 (178)
T COG0634 13 SEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFPFMADLI-RAIDFPLEVDFMHVSSYGGGTS 76 (178)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchhhHHHHH-HhcCCCceeEEEEEeccCCCcc
Confidence 56889999999999999988878877776 44432 2223 33446666566 3345554444
No 67
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=24.79 E-value=89 Score=26.91 Aligned_cols=27 Identities=22% Similarity=0.252 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEechHHHH
Q 024700 208 YRRCTSALQRIARKHIGERIVVVTHGGVIR 237 (264)
Q Consensus 208 ~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~ 237 (264)
-.++++.+.+|.++ -+|+||||..-..
T Consensus 185 T~kIEeLi~eLk~~---yTIviVTHnmqQA 211 (253)
T COG1117 185 TLKIEELITELKKK---YTIVIVTHNMQQA 211 (253)
T ss_pred HHHHHHHHHHHHhc---cEEEEEeCCHHHH
Confidence 34677777777754 4899999975443
No 68
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=24.56 E-value=67 Score=23.92 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=14.7
Q ss_pred eEEEEechHHHHHHH---HHhcCC
Q 024700 226 RIVVVTHGGVIRTLY---QRACPN 246 (264)
Q Consensus 226 ~ilvVsHg~~i~~l~---~~l~g~ 246 (264)
.|||+|||.+-..+. ..+.|.
T Consensus 1 giii~sHG~~A~g~~~~~~~i~G~ 24 (116)
T PF03610_consen 1 GIIIASHGSLAEGLLESAEMILGE 24 (116)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHTS
T ss_pred CEEEEECcHHHHHHHHHHHHHcCC
Confidence 389999997655554 455666
No 69
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=24.44 E-value=2.1e+02 Score=23.74 Aligned_cols=43 Identities=19% Similarity=0.330 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEech--HHHHHHHHHhcC
Q 024700 203 SLDQLYRRCTSALQRIARKHIGERIVVVTHG--GVIRTLYQRACP 245 (264)
Q Consensus 203 s~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg--~~i~~l~~~l~g 245 (264)
.+..+...+...+..+.+++++..|+|++|. |.+..++...+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHH
Confidence 4455556666667777777788899999995 666666665544
No 70
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=24.07 E-value=1.3e+02 Score=26.26 Aligned_cols=27 Identities=19% Similarity=0.222 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEechHH
Q 024700 208 YRRCTSALQRIARKHIGERIVVVTHGGV 235 (264)
Q Consensus 208 ~~R~~~~l~~l~~~~~~~~ilvVsHg~~ 235 (264)
...+.+.+..|.++ .+.+||+|||.--
T Consensus 166 R~~lq~~l~~lw~~-~~~TvllVTHdi~ 192 (248)
T COG1116 166 REELQDELLRLWEE-TRKTVLLVTHDVD 192 (248)
T ss_pred HHHHHHHHHHHHHh-hCCEEEEEeCCHH
Confidence 34555666667765 5679999999643
No 71
>PF10116 Host_attach: Protein required for attachment to host cells; InterPro: IPR019291 Members of this family of bacterial proteins are required for the attachment of the bacterium to host cells [, ].
Probab=23.81 E-value=2.9e+02 Score=21.14 Aligned_cols=42 Identities=17% Similarity=0.228 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcC
Q 024700 204 LDQLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACP 245 (264)
Q Consensus 204 ~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~g 245 (264)
...|.+.+...|+....+..-+.++||+...++..|..++..
T Consensus 71 ~~~Fa~~vA~~L~~~~~~~~~~~LvlvA~p~~LG~LR~~L~~ 112 (138)
T PF10116_consen 71 EERFAREVADRLEKARRAGKFDRLVLVAPPRFLGLLREHLSK 112 (138)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHhCH
Confidence 445556666666666666667889999999999888877654
No 72
>PF13479 AAA_24: AAA domain
Probab=23.74 E-value=1.5e+02 Score=24.69 Aligned_cols=35 Identities=11% Similarity=0.352 Sum_probs=27.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHHH
Q 024700 201 GESLDQLYRRCTSALQRIARKHIGERIVVVTHGGVI 236 (264)
Q Consensus 201 gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i 236 (264)
+.-|.++...+..+++.+... .+.+||+++|...-
T Consensus 105 ~~~yg~~~~~~~~~i~~l~~~-~~~~VI~tah~~~~ 139 (213)
T PF13479_consen 105 GKGYGELQQEFMRFIDKLLNA-LGKNVIFTAHAKEE 139 (213)
T ss_pred cchHHHHHHHHHHHHHHHHHH-CCCcEEEEEEEEEE
Confidence 566788888899999987764 57899999996443
No 73
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=23.03 E-value=1.3e+02 Score=26.61 Aligned_cols=30 Identities=17% Similarity=0.284 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEechHHHH
Q 024700 206 QLYRRCTSALQRIARKHIGERIVVVTHGGVIR 237 (264)
Q Consensus 206 ~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~ 237 (264)
+...++...+..|.+ .+..|++||||++--
T Consensus 31 ~~l~~l~~~i~~l~~--~g~~vilVssGAv~~ 60 (284)
T cd04256 31 GRLASIVEQVSELQS--QGREVILVTSGAVAF 60 (284)
T ss_pred HHHHHHHHHHHHHHH--CCCEEEEEeeCcHHh
Confidence 334444444444444 467899999997653
No 74
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=22.56 E-value=2.6e+02 Score=22.20 Aligned_cols=47 Identities=26% Similarity=0.253 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEechHH-HHHHHHHhcCCCC
Q 024700 202 ESLDQLYRRCTSALQRIARKHIGERIVVVTHGGV-IRTLYQRACPNKK 248 (264)
Q Consensus 202 Es~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~-i~~l~~~l~g~~~ 248 (264)
=+++++.+++.+...++.+......||-|.-||+ ....+...++.+.
T Consensus 10 is~~~i~~~i~~la~~I~~~~~~d~vvgv~~GG~~fa~~L~~~L~~~~ 57 (156)
T PRK09177 10 VSWDQLHRDARALAWRLLPAGQWKGIIAVTRGGLVPAAILARELGIRL 57 (156)
T ss_pred cCHHHHHHHHHHHHHHHHhhCCCCEEEEEecCCeehHHHHHHHcCCCc
Confidence 4788899999998888876422356888888887 6777888888775
No 75
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=21.31 E-value=1.5e+02 Score=28.86 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCCCeEEEEech-HHHHHHHHHh
Q 024700 202 ESLDQLYRRCTSALQRIARKHIGERIVVVTHG-GVIRTLYQRA 243 (264)
Q Consensus 202 Es~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg-~~i~~l~~~l 243 (264)
|+-..+..+...|+...+...+ .++|||||. +++..+...+
T Consensus 224 EPTNhLDv~av~WLe~yL~t~~-~T~liVSHDr~FLn~V~tdI 265 (582)
T KOG0062|consen 224 EPTNHLDVVAVAWLENYLQTWK-ITSLIVSHDRNFLNTVCTDI 265 (582)
T ss_pred CCcccchhHHHHHHHHHHhhCC-ceEEEEeccHHHHHHHHHHH
Confidence 6667777888899999888766 689999998 5555554444
No 76
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=20.38 E-value=1.6e+02 Score=24.78 Aligned_cols=116 Identities=21% Similarity=0.159 Sum_probs=59.4
Q ss_pred CCCCCHhhHHHHHHHHHHHhh---------------h--CCccEEEECChHHHHHHHHHHHHHcCCccEEECCCcccccc
Q 024700 104 DVELNEVGREQAVSVAERLAK---------------E--FKISVIYSSDLKRALETAQTIANRCGGLKVIEDPELRERHL 166 (264)
Q Consensus 104 D~pLT~~G~~QA~~~~~~L~~---------------~--~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~v~~~~~L~E~~~ 166 (264)
|-.|-+.-++|.+.+..+|.- + ..|-.|+--+-.-|++.|+.++...|. .+.-. .|
T Consensus 77 ~G~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi-----~ek~~--~Y 149 (256)
T COG4598 77 DGQLKPADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGI-----AEKAD--AY 149 (256)
T ss_pred CCCeeeCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCc-----hhhhh--cC
Confidence 445777778888888777621 0 223345555666788888888876551 00000 01
Q ss_pred CC-CCCCC--HHHHHhhChHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEechH
Q 024700 167 GD-LQGLV--FREAAKVCPIAYQAFLSGKTDQDIPGGGESLDQLYRRCTSALQRIARKHIGERIVVVTHGG 234 (264)
Q Consensus 167 G~-~~g~~--~~e~~~~~~~~~~~~~~~~~~~~~p~~gEs~~~~~~R~~~~l~~l~~~~~~~~ilvVsHg~ 234 (264)
+. +.|-. ...+.... .....-..|..|... --.++...+.+.+..|.+ ++++.|+|||..
T Consensus 150 P~~LSGGQQQR~aIARaL-----ameP~vmLFDEPTSA-LDPElVgEVLkv~~~LAe--EgrTMv~VTHEM 212 (256)
T COG4598 150 PAHLSGGQQQRVAIARAL-----AMEPEVMLFDEPTSA-LDPELVGEVLKVMQDLAE--EGRTMVVVTHEM 212 (256)
T ss_pred ccccCchHHHHHHHHHHH-----hcCCceEeecCCccc-CCHHHHHHHHHHHHHHHH--hCCeEEEEeeeh
Confidence 11 11100 01111100 001111122333111 123566778888888887 688999999974
No 77
>COG1416 Uncharacterized conserved protein [Function unknown]
Probab=20.25 E-value=2.3e+02 Score=21.43 Aligned_cols=41 Identities=22% Similarity=0.196 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEechHHHHHHHHHhcCC
Q 024700 206 QLYRRCTSALQRIARKHIGERIVVVTHGGVIRTLYQRACPN 246 (264)
Q Consensus 206 ~~~~R~~~~l~~l~~~~~~~~ilvVsHg~~i~~l~~~l~g~ 246 (264)
+-...+...+..+.+..+...|.||.||.-+..|..-....
T Consensus 14 ~k~~~~l~Nl~Nll~~~p~~~IeVV~~g~ai~~l~~~~~~~ 54 (112)
T COG1416 14 SKVNMVLGNLTNLLEDDPSVEIEVVAHGPAIAFLSEKANIA 54 (112)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEeCchhHHhhhhccch
Confidence 33444455555555555778899999999998887765544
No 78
>PLN02162 triacylglycerol lipase
Probab=20.10 E-value=2.3e+02 Score=27.09 Aligned_cols=35 Identities=17% Similarity=0.391 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEec--hHHHHHHHHH
Q 024700 208 YRRCTSALQRIARKHIGERIVVVTH--GGVIRTLYQR 242 (264)
Q Consensus 208 ~~R~~~~l~~l~~~~~~~~ilvVsH--g~~i~~l~~~ 242 (264)
...+.+.+..+.+++++..++|++| ||.+..|...
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 4566777777777778889999999 7888777644
Done!