BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024701
(264 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q20390|PPT1_CAEEL Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1
PE=2 SV=2
Length = 298
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 2 INVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC-GS 60
I +K EL GYN +G SQG R V + C PP+KN VS+GG H G P C G
Sbjct: 89 IKIKNDPELKNGYNAIGFSQGAQFLRAVAQRCPN-PPMKNLVSVGGQHQGVFGAPYCIGD 147
Query: 61 GIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNST 120
I C LI Y +VQ + + Y PN + +Y ++ FL +NNE N T
Sbjct: 148 NIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNEN--NNNPT 205
Query: 121 YKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTL 180
YK SL+NLVL+ F D +++PK+++WFG+Y DG +LP +T LY ED IGLK L
Sbjct: 206 YKRNLLSLKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILPMNETDLYKEDRIGLKKL 265
Query: 181 DDAGRVHFISVAGGHLKISKADMKKHII 208
++GR+HF+ V G HL+I ++ + II
Sbjct: 266 HESGRIHFMDVDGDHLQIPRSVLVNDII 293
>sp|Q54CM0|PPT3_DICDI Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum
GN=ppt3 PE=3 SV=1
Length = 289
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 115/215 (53%), Gaps = 11/215 (5%)
Query: 4 VKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIF 63
V+ +L+ G+N++G SQG LI R V+ P V N++S GP G P
Sbjct: 81 VQADPKLANGFNLIGFSQGTLIARAFVQRY-NNPQVYNYISWNGPQGGQFGTPFVN---- 135
Query: 64 CIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKE 123
+ ++ Y +Q L+ + Y K P+ I KYLE+ FL +NNE K N+TYKE
Sbjct: 136 IPWVDKVLGTIPYEKTIQKKLSVAEYWKDPHRIDKYLERSIFLADINNEYQVK-NTTYKE 194
Query: 124 CFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDA 183
+ L +VL +DK +IPKE+ WF +Y DG+ + V+P Q+ Y+EDW+GL+TLD++
Sbjct: 195 NLTKLNAMVLTYSTNDKTIIPKESGWFSFYADGSGTEVVPLQQQTQYSEDWLGLRTLDES 254
Query: 184 GRVHFISVAGGHLKISKADMKK-----HIIPYLKD 213
R+ F + H D K +PYL++
Sbjct: 255 NRLFFYTTTCTHRDHPIEDYCKPYFTNFTLPYLQN 289
>sp|P45479|PPT1_RAT Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1
SV=1
Length = 306
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 111/211 (52%), Gaps = 5/211 (2%)
Query: 4 VKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSG 61
++K +L GYN +G SQG R V + C PP+ +S+GG H G +P C S
Sbjct: 99 LEKDPKLQHGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESS 157
Query: 62 IFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTY 121
C + A YS VQ+ L + Y P Y FL +N E N +Y
Sbjct: 158 HICDFIRKSLNAGAYSKVVQERLVQAQYWHDPIKEEVYRNCSIFLADINQE--RHINESY 215
Query: 122 KECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLD 181
KE +L+ V++ F +D ++ P ++ WFG+Y G +P Q+T LYTED +GLK +D
Sbjct: 216 KENLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQETTLYTEDRLGLKKMD 275
Query: 182 DAGRVHFISVAGGHLKISKADMKKHIIPYLK 212
AG++ F++ G HL+ISK HIIP+LK
Sbjct: 276 KAGKLVFLAKEGDHLQISKEWFTAHIIPFLK 306
>sp|O88531|PPT1_MOUSE Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=2 SV=2
Length = 306
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 5/211 (2%)
Query: 4 VKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSG 61
++K +L +GYN +G SQG R V + C PP+ +S+GG H G +P C S
Sbjct: 99 LEKDPKLQQGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESS 157
Query: 62 IFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTY 121
C + A YS VQ+ L + Y P Y FL +N E N +Y
Sbjct: 158 HICDFIRKSLNAGAYSKLVQERLVQAQYWHDPIKESVYRNYSIFLADINQE--RCVNESY 215
Query: 122 KECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLD 181
K+ +L+ V++ F +D ++ P ++ WFG+Y G +P Q++ LYTED +GLK +D
Sbjct: 216 KKNLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQESTLYTEDRLGLKKMD 275
Query: 182 DAGRVHFISVAGGHLKISKADMKKHIIPYLK 212
AG++ F++ G HL+ISK HIIP+LK
Sbjct: 276 KAGKLVFLAKEGDHLQISKEWFTAHIIPFLK 306
>sp|Q8HXW6|PPT1_MACFA Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1
PE=2 SV=1
Length = 306
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 112/211 (53%), Gaps = 5/211 (2%)
Query: 3 NVKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GS 60
+ K +L +GYN +G SQG R V + C PP+ N +S+GG H G +P C S
Sbjct: 98 TLAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGES 156
Query: 61 GIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNST 120
C + A YS VQ+ L + Y P Y FL +N E N +
Sbjct: 157 SHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINES 214
Query: 121 YKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTL 180
YK+ +L+ V++ F +D ++ P ++ WFG+Y G +P Q+T LYT+D +GLK +
Sbjct: 215 YKKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEM 274
Query: 181 DDAGRVHFISVAGGHLKISKADMKKHIIPYL 211
D+AG++ F++ G HL++S+ HIIP+L
Sbjct: 275 DNAGQLVFLATEGDHLQLSEEWFYAHIIPFL 305
>sp|P50897|PPT1_HUMAN Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1
Length = 306
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 112/210 (53%), Gaps = 5/210 (2%)
Query: 4 VKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSG 61
+ K +L +GYN +G SQG R V + C PP+ N +S+GG H G +P C S
Sbjct: 99 LAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGESS 157
Query: 62 IFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTY 121
C + A YS VQ+ L + Y P Y FL +N E N +Y
Sbjct: 158 HICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINESY 215
Query: 122 KECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLD 181
K+ +L+ V++ F +D ++ P ++ WFG+Y G +P Q+T LYT+D +GLK +D
Sbjct: 216 KKNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMD 275
Query: 182 DAGRVHFISVAGGHLKISKADMKKHIIPYL 211
+AG++ F++ G HL++S+ HIIP+L
Sbjct: 276 NAGQLVFLATEGDHLQLSEEWFYAHIIPFL 305
>sp|P45478|PPT1_BOVIN Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1
Length = 306
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
Query: 4 VKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--GSG 61
+ K +L +GYN +G SQG R V + C PP+ N +S+GG H G +P C S
Sbjct: 99 LAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQHQGVFGLPRCPGESS 157
Query: 62 IFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTY 121
C + A Y+ +Q+ L + Y P Y FL +N E N +Y
Sbjct: 158 HICDFIRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQE--RGVNESY 215
Query: 122 KECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLD 181
K+ +L+ V++ F +D ++ P ++ WFG+Y G +P Q++ LYT+D +GLK +D
Sbjct: 216 KKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQDRLGLKAMD 275
Query: 182 DAGRVHFISVAGGHLKISKADMKKHIIPYLK 212
AG++ F+++ G HL++S+ HIIP+L+
Sbjct: 276 KAGQLVFLALEGDHLQLSEEWFYAHIIPFLE 306
>sp|Q9W3C7|PPT1_DROME Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1
PE=1 SV=2
Length = 314
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 7/209 (3%)
Query: 8 KELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIF--CI 65
+ L++GY+ +G SQG R V E C PP++N ++LGG H G +P+C + C
Sbjct: 111 EHLAKGYHAIGFSQGGQFLRAVAERCPN-PPMRNLITLGGQHQGIFGLPMCPTLTEKPCD 169
Query: 66 IANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECF 125
L+ Y+ VQ L + Y P KY FL +NNEL N Y E
Sbjct: 170 YITRLLDNAAYAPEVQKALVQATYWHDPIMENKYRLGSTFLADINNEL--FINKFYIENL 227
Query: 126 SSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGR 185
L+ V++ F +D ++ PKE+ WF YY G + P ++K+Y + +GL + G+
Sbjct: 228 QKLKKFVMVQFLNDTIVQPKESQWFQYYTTGQNKVIQPFTESKVYQD--LGLDKMHRQGQ 285
Query: 186 VHFISVAGGHLKISKADMKKHIIPYLKDQ 214
+ F+ V G HL ISKA ++I+P L ++
Sbjct: 286 LVFLGVEGDHLAISKAWFIQNIVPLLLEK 314
>sp|O59747|PDF1_SCHPO Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase
fusion 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pdf1 PE=1 SV=2
Length = 622
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 6/204 (2%)
Query: 10 LSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG-SGIFC-IIA 67
LS G+ +GLSQG L R + + C+ +++ ++LG PH+G ++P C + + C +
Sbjct: 115 LSNGFYALGLSQGGLFLRALAQTCDAAK-IRSLITLGSPHSGINTIPGCSPTNLICKAVV 173
Query: 68 NNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 127
++++ ++ ++Q+H+ + Y + KYLE KFL LNNE+ + E
Sbjct: 174 HSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNEVLHDNYTRNIEKLKE 233
Query: 128 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 187
L NLV + F+ D ++ P + FG+ + + + LY +GLK L + G++
Sbjct: 234 LDNLVAVSFERDDIVEPPYSTGFGWINETT-GENIEMEDFVLYES--LGLKDLVNQGKLE 290
Query: 188 FISVAGGHLKISKADMKKHIIPYL 211
IS G HL++ D ++ Y
Sbjct: 291 TISFPGRHLQMRWGDFDALVLKYF 314
>sp|Q6GNY7|PPT2B_XENLA Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-b PE=2 SV=1
Length = 288
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 4/182 (2%)
Query: 12 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLI 71
+G +++ SQG LI RG++E V F++L P G + L ++ + +
Sbjct: 89 KGVHLICYSQGGLICRGLLETMPEHN-VDTFIALSSPLMGQYGMTLYVQKALPLVNISAL 147
Query: 72 KAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 131
+ Y + ++ ++ GY + P+ KYLE FLPKLNNEL D ++ K F L+ L
Sbjct: 148 QEVCYRKFFKE-ISICGYWRDPHRYEKYLEYSAFLPKLNNELLDSNSTERKRNFLRLRKL 206
Query: 132 VLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISV 191
VLI DD+V+ P +++ FG+Y + V+ + +Y +D GL++LD G + SV
Sbjct: 207 VLIGGPDDEVIAPWQSSHFGFYNEK--EEVVNMKDQMVYQKDTFGLQSLDGRGAITIYSV 264
Query: 192 AG 193
G
Sbjct: 265 PG 266
>sp|Q9VKH6|PPT2_DROME Lysosomal thioesterase PPT2 homolog OS=Drosophila melanogaster
GN=Ppt2 PE=2 SV=1
Length = 288
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 12 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLI 71
EG ++G SQG L+ R ++ VK F+SL P AG G+ +I +L
Sbjct: 90 EGIIVLGYSQGGLLARAAIQSLPEHN-VKTFISLSSPQAGQ-----YGTSFLHLIFPDLA 143
Query: 72 KA---EVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSL 128
E++ V H + GY P YL+ +FLP +NNE ++++K L
Sbjct: 144 AKTAFELFYSRVGQHTSVGGYWNDPQRQDLYLKYSEFLPLINNEKKTSNSTSFKMGMVRL 203
Query: 129 QNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHF 188
LV+I +D V+ P +++ FGY+ + V+P + ++T D IG++TL +AG++
Sbjct: 204 NKLVMIGGPNDDVITPWQSSHFGYFDENM--DVIPFIRRPIFTSDSIGIRTLQEAGKL-- 259
Query: 189 ISVAGGHLKISKADMKKHII-----PYL 211
I V H+ ++ +I PYL
Sbjct: 260 IIVVKPHVHHLAWHTRRDVIHEVIFPYL 287
>sp|O35448|PPT2_MOUSE Lysosomal thioesterase PPT2 OS=Mus musculus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 4 VKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIF 63
V M++ EG +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 95 VPIMEKAPEGVHLICYSQGGLVCRALLSVMDNHN-VDSFISLSSPQMGQYGDTDYLKWLF 153
Query: 64 CIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKE 123
+ + YS + Q+ + Y P+ YL FL +N E + +++
Sbjct: 154 PTSMRSNLYRVCYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRK 212
Query: 124 CFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDA 183
F + LVLI DD V+ P ++++FG+Y A VL ++ +Y D GLKTL
Sbjct: 213 NFLRVGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLKTLLAR 270
Query: 184 GRVHFISVAG 193
G + +AG
Sbjct: 271 GAIVRCPMAG 280
>sp|O70489|PPT2_RAT Lysosomal thioesterase PPT2 OS=Rattus norvegicus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 4 VKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIF 63
V M++ EG +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 95 VPIMEKAPEGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTDYLKWLF 153
Query: 64 CIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKE 123
+ + YS + Q+ + Y P+ YL FL +N E + +++
Sbjct: 154 PTSMRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRK 212
Query: 124 CFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDA 183
F + LVLI DD V+ P ++++FG+Y A VL ++ +Y D GLKTL
Sbjct: 213 NFLRVGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLKTLLAR 270
Query: 184 GRVHFISVAG 193
G + +AG
Sbjct: 271 GAIVRCPMAG 280
>sp|Q1JQA0|PPT2_BOVIN Lysosomal thioesterase PPT2 OS=Bos taurus GN=PPT2 PE=2 SV=1
Length = 305
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 4/187 (2%)
Query: 7 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCII 66
M + +G +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 101 MAKALQGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTNYLKWLFPTS 159
Query: 67 ANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 126
+ + YS + Q+ + Y P+ YL FL +N E + +++ F
Sbjct: 160 MRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFL 218
Query: 127 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 186
L LVLI DD V+ P ++++FG+Y A VL +K +Y D GLKTL G +
Sbjct: 219 RLGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEKQLVYLRDSFGLKTLLARGAI 276
Query: 187 HFISVAG 193
+AG
Sbjct: 277 VRCPMAG 283
>sp|Q6PCJ9|PPT2A_XENLA Lysosomal thioesterase PPT2-A OS=Xenopus laevis GN=ppt2-a PE=2 SV=1
Length = 296
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 12 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIFCIIANNLI 71
+G +++ SQG LI RG+++ V F+SL P G +F + +
Sbjct: 97 DGVHLLCYSQGGLICRGLLQTMPDHN-VDTFISLSSPQMGQYGDTDYLRYLFPTYVKSNL 155
Query: 72 KAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 131
Y+ Q + + P+ Y+ FL LN+E P+ + +K+ F L+ +
Sbjct: 156 YRLCYTQMGQT-FSICNFWNDPHHHGIYVNVSDFLAPLNSERPEPNATDWKKNFLRLRKM 214
Query: 132 VLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISV 191
VLI DD V+ P E++ FG+Y + VL + +Y +D GL+++D G + V
Sbjct: 215 VLIGGPDDGVITPWESSHFGFYDEN--ETVLEMKYQMVYQDDTFGLRSMDYRGAITVYGV 272
Query: 192 AG 193
G
Sbjct: 273 PG 274
>sp|Q9UMR5|PPT2_HUMAN Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT2 PE=1 SV=4
Length = 302
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 4 VKKMKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGSGIF 63
V M + +G +++ SQG L+ R ++ + V +F+SL P G +F
Sbjct: 95 VPIMAKAPQGVHLICYSQGGLVCRALLSVMDDHN-VDSFISLSSPQMGQYGDTDYLKWLF 153
Query: 64 CIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKE 123
+ + YS + Q+ + Y P+ YL FL +N E + +++
Sbjct: 154 PTSMRSNLYRICYSPWGQE-FSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRK 212
Query: 124 CFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDA 183
F + +LVLI DD V+ P ++++FG+Y A VL ++ +Y D GLKTL
Sbjct: 213 NFLRVGHLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQLVYLRDSFGLKTLLAR 270
Query: 184 GRVHFISVAG 193
G + +AG
Sbjct: 271 GAIVRCPMAG 280
>sp|Q09371|YS42_CAEEL Uncharacterized protein ZK177.2 OS=Caenorhabditis elegans
GN=ZK177.2 PE=4 SV=1
Length = 296
Score = 34.7 bits (78), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 21/113 (18%)
Query: 113 LPDKRNSTYKECFSSLQNLVLIM-FKDDK-------------VLIPKETAWFGYYPDGAF 158
L D R S Y+ C + + LVL M +DK ++ P W Y DG
Sbjct: 153 LADWRTSDYRRCITIMAQLVLAMRIANDKMKFVHGDIYMMNILIAPTTKRWIEYNIDGKT 212
Query: 159 SPV----LPPQKTKLYTEDWIGLK-TLDDAGRVHFISVAGGH-LKISKADMKK 205
+ + PQ +++ W G D R+H ++ GH L SK D KK
Sbjct: 213 ITIQTFGIIPQLID-FSKSWCGADPERHDISRLHTVAKRVGHSLNGSKRDKKK 264
>sp|A1KVS6|AROE_NEIMF Shikimate dehydrogenase OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=aroE PE=3
SV=1
Length = 269
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 156 GAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGH-LKISKADMKKHIIPYLKDQ 214
GA + ++P + KL ++ G+ +D +V I++ G L + + +IP LK+
Sbjct: 86 GAVNTLIPLKNGKLRGDNTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEH 145
Query: 215 ASVRVIESRKTKGPNEE 231
R++ + +T+ EE
Sbjct: 146 RPARIVIANRTRAKAEE 162
>sp|P28824|NRP1_XENLA Neuropilin-1 OS=Xenopus laevis GN=nrp1 PE=2 SV=1
Length = 928
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 161 VLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYLKDQASVRVI 220
LPP T YT++W+ + L + V + + GG K +K M+K I Y + +I
Sbjct: 472 ALPPSNTHPYTKEWLQID-LAEEKIVRGVIIQGGKHKENKVFMRKFKIGYSNNGTEWEMI 530
Query: 221 ESRKTKGPNEEEGST 235
P EG+T
Sbjct: 531 MDSSKNKPKTFEGNT 545
>sp|P56992|AROE_NEIMB Shikimate dehydrogenase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=aroE PE=3 SV=1
Length = 269
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 156 GAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGH-LKISKADMKKHIIPYLKDQ 214
GA + ++P + KL ++ G+ +D +V I++ G L + + +IP LK+
Sbjct: 86 GAVNTLIPLKNGKLRGDNTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEH 145
Query: 215 ASVRVIESRKTKGPNEE 231
R++ + +T+ EE
Sbjct: 146 RPARIVIANRTRAKAEE 162
>sp|P35409|GLHR_ANTEL Probable glycoprotein hormone G-protein coupled receptor
OS=Anthopleura elegantissima PE=2 SV=1
Length = 925
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 83 HLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 131
H++ SG + P+DI ++LEK K+L NN++ + K +SSL L
Sbjct: 66 HVSFSGEISIPSDILQHLEKLKYLTLNNNKIKNIAKFRVKNGYSSLITL 114
>sp|O31929|YOPI_BACSU SPBc2 prophage-derived uncharacterized protein YopI OS=Bacillus
subtilis (strain 168) GN=yopI PE=4 SV=1
Length = 177
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 19/72 (26%)
Query: 95 DIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYP 154
+IPK L + KF CF NL++ + DDK +E A FGYY
Sbjct: 82 EIPKVLREIKF------------------CFYKNTNLIVSVTPDDKAT-TEEFAEFGYYR 122
Query: 155 DGAFSPVLPPQK 166
D F+ LP ++
Sbjct: 123 DKLFNINLPSKQ 134
>sp|A4W5X6|F16PA_ENT38 Fructose-1,6-bisphosphatase class 1 OS=Enterobacter sp. (strain
638) GN=fbp PE=3 SV=1
Length = 332
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 15/110 (13%)
Query: 47 GPHAGTASVPLCGSGIFCIIANNLIKAEVYSDYVQDHLAPSGYLKFPNDIPKYLEKCKFL 106
G HA T L G+FC+ + E S Y + Y+KFPN + KY++ C+
Sbjct: 174 GVHAFTYDPSL---GVFCLCQERMRYPEKGSTY---SINEGNYIKFPNGVKKYIKFCQ-- 225
Query: 107 PKLNNELPDKRNSTYKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYPDG 156
+ P +R T + S + + + K L P + +PDG
Sbjct: 226 ---EEDTPTQRPYTSRYIGSLVADFHRNLLKGGIYLYPSTAS----HPDG 268
>sp|Q9LRQ7|BAHD2_ARATH BAHD acyltransferase At3g29680 OS=Arabidopsis thaliana GN=At3g29680
PE=2 SV=1
Length = 451
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 187 HFISVAGGHLKISKADMKKHIIPYLKDQASVRVIES 222
HF+ ++G HLK + D K HI+ + KD S+ V+ES
Sbjct: 72 HFLPLSG-HLKWNPQDPKPHIVIFPKDTVSLTVVES 106
>sp|Q3SGC3|RIMM_THIDA Ribosome maturation factor RimM OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=rimM PE=3 SV=1
Length = 189
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 157 AFSPVLPPQKTKLYTEDWIGLKTLD----DAGRVHFISVAGGHLKISKADMKKHIIPYL 211
A S + PP++ + Y D IGL ++ + G+V + +G H + ++H+IP++
Sbjct: 109 AKSALPPPEENEFYWSDLIGLTVMNREGVELGKVDSLMESGAHDLLVVKGRREHLIPFV 167
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,718,219
Number of Sequences: 539616
Number of extensions: 4868759
Number of successful extensions: 10389
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 10332
Number of HSP's gapped (non-prelim): 48
length of query: 264
length of database: 191,569,459
effective HSP length: 115
effective length of query: 149
effective length of database: 129,513,619
effective search space: 19297529231
effective search space used: 19297529231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)