BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024705
(264 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359496049|ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
[Vitis vinifera]
gi|296087050|emb|CBI33377.3| unnamed protein product [Vitis vinifera]
Length = 398
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 171/232 (73%), Positives = 201/232 (86%), Gaps = 1/232 (0%)
Query: 27 QNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKDNALRLALSQLANDFGKES 85
Q G+RDA+ CIGM+ SLSS+ E E + DE +D K +KD ALRLA+S+LA DFG+ES
Sbjct: 29 QTGKRDAVACIGMHTRSLSSSVEFLEIECDEYGNDVKAAEKDTALRLAISRLAGDFGRES 88
Query: 86 MLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQ 145
MLSL+RFF SR PVISTGSLKLDLALGIGGLPKGRIVEIYG+EASGKTTLALH+IKEAQ
Sbjct: 89 MLSLQRFFVSRHAPVISTGSLKLDLALGIGGLPKGRIVEIYGQEASGKTTLALHIIKEAQ 148
Query: 146 KLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVD 205
KLGGYCAYLDVENA++PS AE+MG++ +NLLI+ PDSAENLLS+V+TLTKSGS+DVIVVD
Sbjct: 149 KLGGYCAYLDVENAMNPSFAESMGVNVDNLLISPPDSAENLLSMVNTLTKSGSMDVIVVD 208
Query: 206 SVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
SVAAL+P+ E+ V I G Y D QS+IM QALRKIHYSLC+S TLIIF+NQV+
Sbjct: 209 SVAALVPQHELDVVIGGTYQDVQSQIMAQALRKIHYSLCRSETLIIFVNQVR 260
>gi|356571990|ref|XP_003554153.1| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
[Glycine max]
Length = 386
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 171/242 (70%), Positives = 198/242 (81%), Gaps = 7/242 (2%)
Query: 21 LFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKDNALRLALSQLAN 79
L F QNG R ++ IGM SLSSAAE +F+ D HDD K +KDNAL LA+SQLA+
Sbjct: 14 LLSPFCQNGGRQIMSRIGMTACSLSSAAEASDFECDAIHDDVKAAEKDNALCLAVSQLAS 73
Query: 80 DFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALH 139
+F KESMLSL++ FG RR VISTGSLKLDLALGIGGLPKGRIVEIYGREA+GKTTLA+
Sbjct: 74 EFSKESMLSLQKIFGVRRAHVISTGSLKLDLALGIGGLPKGRIVEIYGREAAGKTTLAIQ 133
Query: 140 VIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSI 199
+IKEAQKLGGYCAYLDVENALD SL E+MGID ENLLI+ PD AENLLS+VDTLTKSG++
Sbjct: 134 IIKEAQKLGGYCAYLDVENALDFSLMESMGIDTENLLISHPDCAENLLSMVDTLTKSGAV 193
Query: 200 DVIVVDSVAALIPKCE---IGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQV 256
DVIV+DSVAAL+PKCE +GV N D QSR+MTQALRKIHYSL S TLI+F+NQ+
Sbjct: 194 DVIVIDSVAALVPKCELDQLGVTTN---RDLQSRMMTQALRKIHYSLSHSQTLIVFINQI 250
Query: 257 KV 258
++
Sbjct: 251 RL 252
>gi|357509615|ref|XP_003625096.1| RecA [Medicago truncatula]
gi|355500111|gb|AES81314.1| RecA [Medicago truncatula]
Length = 394
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/240 (67%), Positives = 198/240 (82%), Gaps = 2/240 (0%)
Query: 21 LFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKDNALRLALSQLAN 79
L+PS +NG R+ +T IG+N SLS+ AE + + DE HDD K +K+NAL LA+SQLA+
Sbjct: 20 LYPS-RKNGFREIMTRIGVNTCSLSTTAEASDLECDEIHDDVKAAEKNNALCLAVSQLAS 78
Query: 80 DFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALH 139
+F KESMLSL++FF R V+STGSLKLD+ALGIGGLPKGRIVEIYGREA+GKTTLAL
Sbjct: 79 EFSKESMLSLQKFFRVRYANVVSTGSLKLDIALGIGGLPKGRIVEIYGREAAGKTTLALQ 138
Query: 140 VIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSI 199
+IKEAQKLGGYCAYLDVE+ALD SL E+MG++ +NLLI+ PD AENLLS+VDTLTKSG++
Sbjct: 139 IIKEAQKLGGYCAYLDVESALDLSLVESMGVNTKNLLISNPDCAENLLSMVDTLTKSGAV 198
Query: 200 DVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKVL 259
DVIVVDSVAAL+PKCE+ D SRIMTQALRKIHYSL +S TL+IF+NQVK++
Sbjct: 199 DVIVVDSVAALVPKCELDQLGVATSQDLHSRIMTQALRKIHYSLSRSQTLLIFVNQVKIV 258
>gi|224139890|ref|XP_002323326.1| predicted protein [Populus trichocarpa]
gi|222867956|gb|EEF05087.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/193 (81%), Positives = 176/193 (91%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QKDNALRLAL+QLA +FG+ESMLSL+RFF SRR PVISTGSLKLDLALGIGGLPKGR+VE
Sbjct: 1 QKDNALRLALTQLAGEFGRESMLSLQRFFNSRRAPVISTGSLKLDLALGIGGLPKGRMVE 60
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG+EASGKTTLALH+IKEAQKLGGYCAYLDVENA+DP L E+MGI+ ENLLI+ PD AE
Sbjct: 61 IYGKEASGKTTLALHIIKEAQKLGGYCAYLDVENAMDPLLPESMGINTENLLISHPDCAE 120
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
NLLSVVDTLTKSGS+DVIVVDSVAAL+P+ EI + G + D QSR+MTQALRKI+YSLC
Sbjct: 121 NLLSVVDTLTKSGSVDVIVVDSVAALVPQREIDTAVGGTFEDIQSRLMTQALRKINYSLC 180
Query: 245 QSHTLIIFLNQVK 257
QS TLIIFLNQV+
Sbjct: 181 QSQTLIIFLNQVR 193
>gi|6143863|gb|AAF04410.1|AC010927_3 putative RecA protein [Arabidopsis thaliana]
Length = 389
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 161/251 (64%), Positives = 194/251 (77%), Gaps = 2/251 (0%)
Query: 9 RFSSIAPRRFFSLFPSFSQ-NGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQK 66
R S +P + F F SQ NGRR + C G LSS E + + DE DD K+ +K
Sbjct: 3 RLSWASPIQRFRFFSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEK 62
Query: 67 DNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIY 126
D AL LALSQL+ DF K+S LSL+RF+ RR VISTGSL LDLALG+GGLPKGR+VE+Y
Sbjct: 63 DTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVY 122
Query: 127 GREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENL 186
G+EASGKTTLALH+IKEAQKLGGYCAYLD ENA+DPSLAE++G++ E LLI++P SAE +
Sbjct: 123 GKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKM 182
Query: 187 LSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQS 246
L++VD LTKSGS+DVIVVDSVAAL P+CE+ P+ Y D QSRIMTQALRKIHYS+ S
Sbjct: 183 LNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYS 242
Query: 247 HTLIIFLNQVK 257
TLI+FLNQV+
Sbjct: 243 QTLIVFLNQVR 253
>gi|22330951|ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis thaliana]
gi|75158993|sp|Q8RY99.1|RECAM_ARATH RecName: Full=DNA repair protein recA homolog 2, mitochondrial;
AltName: Full=Recombinase A homolog 2; Flags: Precursor
gi|18996122|gb|AAL79768.1| RecA protein [Arabidopsis thaliana]
gi|22531124|gb|AAM97066.1| putative RecA protein [Arabidopsis thaliana]
gi|23198012|gb|AAN15533.1| putative RecA protein [Arabidopsis thaliana]
gi|332641343|gb|AEE74864.1| DNA repair protein recA-like 2 [Arabidopsis thaliana]
Length = 389
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 161/251 (64%), Positives = 194/251 (77%), Gaps = 2/251 (0%)
Query: 9 RFSSIAPRRFFSLFPSFSQ-NGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQK 66
R S +P + F F SQ NGRR + C G LSS E + + DE DD K+ +K
Sbjct: 3 RLSWASPIQRFRFFSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEK 62
Query: 67 DNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIY 126
D AL LALSQL+ DF K+S LSL+RF+ RR VISTGSL LDLALG+GGLPKGR+VE+Y
Sbjct: 63 DTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVY 122
Query: 127 GREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENL 186
G+EASGKTTLALH+IKEAQKLGGYCAYLD ENA+DPSLAE++G++ E LLI++P SAE +
Sbjct: 123 GKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKM 182
Query: 187 LSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQS 246
L++VD LTKSGS+DVIVVDSVAAL P+CE+ P+ Y D QSRIMTQALRKIHYS+ S
Sbjct: 183 LNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYS 242
Query: 247 HTLIIFLNQVK 257
TLI+FLNQV+
Sbjct: 243 QTLIVFLNQVR 253
>gi|255586516|ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus communis]
gi|223526148|gb|EEF28487.1| DNA repair protein reca, putative [Ricinus communis]
Length = 388
Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/259 (64%), Positives = 199/259 (76%), Gaps = 7/259 (2%)
Query: 1 MVQLLQPFRFSSIAPRRFFS-LFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPH 58
M L R S+ R S FPS SQN R +AIT +G L S +F+ D+
Sbjct: 1 MAPFLHSLRLHSLPRFRLCSSFFPSLSQNMRNEAITSLGRGPRLLCSL----DFECDKLI 56
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
DD++ M+K N L LAL +++ +F +ESMLSL RFF SR+ VISTGSLKLDLALGIGGLP
Sbjct: 57 DDSEAMEKHNKLFLALKEISGEFCRESMLSLHRFFSSRQASVISTGSLKLDLALGIGGLP 116
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR+VEIYG+EASGKTTLALH+IKEAQK GGYCAYLD ENALDPSL E+MG++ ENLLI+
Sbjct: 117 KGRMVEIYGQEASGKTTLALHIIKEAQKCGGYCAYLDAENALDPSLVESMGVNTENLLIS 176
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
PDSAENLLSVVDTLTKSGS+DVIVVDSVAAL+P+ E+ + G D QSRIM+QA+RK
Sbjct: 177 PPDSAENLLSVVDTLTKSGSVDVIVVDSVAALVPQLELDTML-GSTEDRQSRIMSQAVRK 235
Query: 239 IHYSLCQSHTLIIFLNQVK 257
I+YSL QS TLIIFLNQV+
Sbjct: 236 INYSLSQSKTLIIFLNQVR 254
>gi|449449809|ref|XP_004142657.1| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
[Cucumis sativus]
Length = 401
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/254 (61%), Positives = 194/254 (76%), Gaps = 5/254 (1%)
Query: 8 FRFSSIA---PRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKI 63
FRF + P RF SL S Q GRRD I+ +G++ SS +V E++ D +DD K
Sbjct: 10 FRFCRLKHFEPSRFSSLSHSLLQ-GRRDVISYVGIDACHFSSLVDVWEYECDMLNDDTKT 68
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+KD AL A+SQ+A DFGK+S L L+RF SR PVISTGSLKLD+ALGIGGLPKGRI+
Sbjct: 69 TEKDTALHSAISQVAADFGKDSKLFLQRFLSSRFAPVISTGSLKLDIALGIGGLPKGRII 128
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG+EASGKTTLALH+IKEAQKLGGYCAY D ENA+D S AE+MG++ +NLLI+ P SA
Sbjct: 129 EIYGQEASGKTTLALHIIKEAQKLGGYCAYFDAENAMDMSFAESMGVNVDNLLISPPASA 188
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
ENLL V+TL +SGS+DV+VVD+VAAL+P+CE+ PI D++ R+M QALRKIHYSL
Sbjct: 189 ENLLCAVNTLVRSGSVDVVVVDTVAALVPQCELDAPIGSSERDSRPRVMNQALRKIHYSL 248
Query: 244 CQSHTLIIFLNQVK 257
S TL++F+NQV+
Sbjct: 249 KLSQTLVVFINQVR 262
>gi|133711814|gb|ABO36632.1| putative recA protein [Solanum lycopersicum]
Length = 395
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 195/254 (76%), Gaps = 5/254 (1%)
Query: 4 LLQPFRFSSIAPRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFDDEPHDDAKI 63
+LQ RF S + R S+FP S + ++ ++ S+ E+ DE DD K
Sbjct: 2 VLQFLRFIS-SSSRCLSVFPLSSFKPENGMVWRRMLSAYASSAEGEL----DEIQDDTKT 56
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+K +AL ALSQL DF KES LSL+RFFG+RR PVI TGSL+LDLALG+GGLPKGRIV
Sbjct: 57 SEKASALHSALSQLEGDFCKESRLSLQRFFGARRTPVIPTGSLRLDLALGLGGLPKGRIV 116
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG+EASGKTTLALHVI+EAQKLGGYCAYLDVEN ++PSLAEA+G++ ENLLI+QPDSA
Sbjct: 117 EIYGQEASGKTTLALHVIREAQKLGGYCAYLDVENGMNPSLAEAIGVNVENLLISQPDSA 176
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
ENLLS+V+TLTKSGS+DVIVVDSVAAL+P+ EI + QS+IMTQALRKIHYSL
Sbjct: 177 ENLLSIVNTLTKSGSMDVIVVDSVAALVPQLEIDATLCDSPKGLQSKIMTQALRKIHYSL 236
Query: 244 CQSHTLIIFLNQVK 257
S TLIIF+NQV+
Sbjct: 237 GNSSTLIIFINQVR 250
>gi|224086956|ref|XP_002308017.1| predicted protein [Populus trichocarpa]
gi|222853993|gb|EEE91540.1| predicted protein [Populus trichocarpa]
Length = 335
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 161/192 (83%), Gaps = 6/192 (3%)
Query: 7 PFRFSSIAPRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQ 65
RF+S+A R +L QNGRR A++ IG N H+LSS V +F+ DE HD+ + Q
Sbjct: 4 SIRFNSLARFRLCTLSQ---QNGRRHAVSFIGRNDHTLSSV--VSDFEPDELHDEGEAKQ 58
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
KDNALRLAL+QLA +FG+ESMLSL+RFF SRR +ISTGSLKLDLALGIGGLPKGR+VEI
Sbjct: 59 KDNALRLALTQLAGEFGRESMLSLQRFFSSRRASIISTGSLKLDLALGIGGLPKGRMVEI 118
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG+EASGKTT+ALH+IKEAQKLGGYCA+LDVENA+D SLA++MG++ ENLLI++PD AEN
Sbjct: 119 YGQEASGKTTIALHIIKEAQKLGGYCAFLDVENAMDHSLAKSMGVNTENLLISRPDCAEN 178
Query: 186 LLSVVDTLTKSG 197
LLSVV+TLTKSG
Sbjct: 179 LLSVVNTLTKSG 190
>gi|226495001|ref|NP_001143776.1| uncharacterized protein LOC100276540 [Zea mays]
gi|194699132|gb|ACF83650.1| unknown [Zea mays]
gi|195626822|gb|ACG35241.1| hypothetical protein [Zea mays]
gi|414878734|tpg|DAA55865.1| TPA: putative recA DNA recombination family protein [Zea mays]
Length = 409
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/235 (60%), Positives = 182/235 (77%), Gaps = 5/235 (2%)
Query: 27 QNGRRDAITCIGMNIHSLSSAAEVPEFD---DEPHDDAKIMQKDNALRLALSQLANDFGK 83
QNG+RD + S+S+ ++ + D D P DD K ++K+++L +A+SQLA DF +
Sbjct: 41 QNGKRDTFCSLWFKGRSVSTTVDM-QLDYESDPPLDDTKAIEKESSLNVAVSQLAIDFDR 99
Query: 84 ESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKE 143
+S L L+RF +R+ V+STGSLKLDLALG+GGLPKGR+VEIYG+EASGKTTLALHVIKE
Sbjct: 100 DSNLCLERFSRARKASVVSTGSLKLDLALGVGGLPKGRMVEIYGKEASGKTTLALHVIKE 159
Query: 144 AQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIV 203
AQK GGYCAY+D ENA +PS AE++G+D+E LLIAQPDSAEN LS+V+TL S+ V+V
Sbjct: 160 AQKNGGYCAYIDAENAFNPSFAESIGVDSERLLIAQPDSAENSLSIVNTLVGG-SVAVVV 218
Query: 204 VDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
VDSVAALIPKCEI I D QS +MT+ALRKI Y+LC+S TLIIF+NQV+
Sbjct: 219 VDSVAALIPKCEIEGEIYTNCGDIQSHLMTRALRKIQYTLCRSETLIIFVNQVRT 273
>gi|242059871|ref|XP_002459081.1| hypothetical protein SORBIDRAFT_03g045520 [Sorghum bicolor]
gi|241931056|gb|EES04201.1| hypothetical protein SORBIDRAFT_03g045520 [Sorghum bicolor]
Length = 760
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/226 (63%), Positives = 180/226 (79%), Gaps = 5/226 (2%)
Query: 36 CIGMNIHSLSSAAEVPEFD---DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRF 92
C G+NI S+ SA + D D P D AK ++K+++L +A+SQLA+DF +ES L L+RF
Sbjct: 52 CNGLNI-SVQSANLDMQLDYESDPPLDGAKAIEKESSLNIAVSQLASDFDRESNLCLERF 110
Query: 93 FGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCA 152
+R+ V+STGSLKLDLALG+GGLPKGR+VEIYG+EASGKTTLALHV+KEAQK GGYCA
Sbjct: 111 SRTRKASVVSTGSLKLDLALGVGGLPKGRMVEIYGKEASGKTTLALHVVKEAQKNGGYCA 170
Query: 153 YLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIP 212
Y+D ENA +PS AEA+G+D+E LLIAQPDSAEN LS+V++L S+ V+VVDSVAALIP
Sbjct: 171 YIDAENAFNPSFAEAIGVDSERLLIAQPDSAENSLSIVNSLVGG-SVAVVVVDSVAALIP 229
Query: 213 KCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
KCEI I D QSR+MT+ALRKI Y+LC+S TLIIF+NQV+
Sbjct: 230 KCEIEGEIYTNSEDIQSRLMTRALRKIQYTLCRSETLIIFVNQVRT 275
>gi|357131163|ref|XP_003567210.1| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
[Brachypodium distachyon]
Length = 356
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 169/204 (82%), Gaps = 1/204 (0%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
D P DDAK ++K++ L +A+SQLA+DF +ES L L+RF +RR VI TGSLKLDLALGI
Sbjct: 18 DPPIDDAKSLEKESTLNVAVSQLASDFDRESNLCLERFSRTRRASVIPTGSLKLDLALGI 77
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VEI+G+E+SGKTTLALHVIKEAQK GG CAY+D ENA DPS AEA+G+D E
Sbjct: 78 GGLPKGRMVEIFGKESSGKTTLALHVIKEAQKSGGCCAYIDAENAFDPSFAEAIGVDTEK 137
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LLIAQPDSAEN LS+V+TL GSIDV+VVDSVAALIPKCE+ I+ Y + QSR+MT+
Sbjct: 138 LLIAQPDSAENSLSIVNTLV-GGSIDVVVVDSVAALIPKCELEGEIHTNYGETQSRLMTR 196
Query: 235 ALRKIHYSLCQSHTLIIFLNQVKV 258
ALRKI Y+L +S TLIIF+NQV+
Sbjct: 197 ALRKIQYTLSRSETLIIFVNQVRT 220
>gi|414878735|tpg|DAA55866.1| TPA: putative recA DNA recombination family protein isoform 1 [Zea
mays]
gi|414878736|tpg|DAA55867.1| TPA: putative recA DNA recombination family protein isoform 2 [Zea
mays]
Length = 346
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 167/204 (81%), Gaps = 1/204 (0%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
D P DD K ++K+++L +A+SQLA DF ++S L L+RF +R+ V+STGSLKLDLALG+
Sbjct: 8 DPPLDDTKAIEKESSLNVAVSQLAIDFDRDSNLCLERFSRARKASVVSTGSLKLDLALGV 67
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VEIYG+EASGKTTLALHVIKEAQK GGYCAY+D ENA +PS AE++G+D+E
Sbjct: 68 GGLPKGRMVEIYGKEASGKTTLALHVIKEAQKNGGYCAYIDAENAFNPSFAESIGVDSER 127
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LLIAQPDSAEN LS+V+TL S+ V+VVDSVAALIPKCEI I D QS +MT+
Sbjct: 128 LLIAQPDSAENSLSIVNTLVGG-SVAVVVVDSVAALIPKCEIEGEIYTNCGDIQSHLMTR 186
Query: 235 ALRKIHYSLCQSHTLIIFLNQVKV 258
ALRKI Y+LC+S TLIIF+NQV+
Sbjct: 187 ALRKIQYTLCRSETLIIFVNQVRT 210
>gi|357131683|ref|XP_003567464.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein recA homolog 2,
mitochondrial-like [Brachypodium distachyon]
Length = 346
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 163/202 (80%), Gaps = 1/202 (0%)
Query: 57 PHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGG 116
P DD K + K++ L +A+SQLA DF +ES L L+RF +RR VI TGSLKLDLALGIGG
Sbjct: 10 PLDDTKSLAKESTLNVAVSQLAGDFDRESNLCLERFSRTRRASVIPTGSLKLDLALGIGG 69
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKG++VEI+G+E+SGKTTLALHV+KEAQK GGYC Y+D ENA DPS AEA+G+D E LL
Sbjct: 70 LPKGKMVEIFGKESSGKTTLALHVVKEAQKSGGYCTYIDAENAFDPSSAEAIGVDTEKLL 129
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
IAQPDSAEN LS+V+TL GSIDV+VVDSVA LIPKCE+ ++ Y + QSR+MT+AL
Sbjct: 130 IAQPDSAENSLSIVNTLV-GGSIDVVVVDSVAGLIPKCELEGEMHTNYGETQSRLMTRAL 188
Query: 237 RKIHYSLCQSHTLIIFLNQVKV 258
RK Y+L +S TLIIF+NQV+
Sbjct: 189 RKXQYTLSRSETLIIFVNQVRT 210
>gi|218189711|gb|EEC72138.1| hypothetical protein OsI_05156 [Oryza sativa Indica Group]
Length = 410
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 146/250 (58%), Positives = 187/250 (74%), Gaps = 10/250 (4%)
Query: 14 APRRFFSLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFD---DEPHDDAKIMQKDNAL 70
+P R F L QN D S+S++ +V + D D P D K+++K++ L
Sbjct: 34 SPLRRFPL-----QNWINDRFCWFLSKSCSMSTSVDV-QLDYETDPPLDGVKVLEKESTL 87
Query: 71 RLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREA 130
+A+SQLA+DF +ES L L+RF +RR PVISTGSLKLD+ALGIGGLPKGR+VE++G+EA
Sbjct: 88 SVAVSQLASDFDRESNLCLERFSRTRRTPVISTGSLKLDIALGIGGLPKGRMVELFGKEA 147
Query: 131 SGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVV 190
SGKTTLALHV+KEAQK GG CAY+D ENA +PS+AEA+G++ E LLIAQPDSAEN LS+V
Sbjct: 148 SGKTTLALHVVKEAQKKGGCCAYIDAENAFNPSVAEAIGVNVEKLLIAQPDSAENSLSIV 207
Query: 191 DTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLI 250
+TL GSIDV+VVDSVAALIP+CE+ I D QSR+MT+ALRKI ++L +S TLI
Sbjct: 208 NTLV-GGSIDVVVVDSVAALIPRCELEGEIYMNSEDVQSRLMTRALRKIQHTLSRSETLI 266
Query: 251 IFLNQVKVLL 260
IF+NQV+ L
Sbjct: 267 IFVNQVRTKL 276
>gi|222619856|gb|EEE55988.1| hypothetical protein OsJ_04733 [Oryza sativa Japonica Group]
Length = 392
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/206 (65%), Positives = 170/206 (82%), Gaps = 1/206 (0%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
D P D K+++K++ L +A+SQLA+DF +ES L L+RF +RR PVISTGSLKLD+ALGI
Sbjct: 54 DPPLDGVKVLEKESTLSVAVSQLASDFDRESNLCLERFSRTRRTPVISTGSLKLDIALGI 113
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VE++G+EASGKTTLALHV+KEAQK GG CAY+D ENA +PS+AEA+G++ E
Sbjct: 114 GGLPKGRMVELFGKEASGKTTLALHVVKEAQKKGGCCAYIDAENAFNPSVAEAIGVNVEK 173
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LLIAQPDSAEN LS+V+TL GSIDV+VVDSVAALIP+CE+ I D QSR+MT+
Sbjct: 174 LLIAQPDSAENSLSIVNTLV-GGSIDVVVVDSVAALIPRCELEGEIYMNSEDVQSRLMTR 232
Query: 235 ALRKIHYSLCQSHTLIIFLNQVKVLL 260
ALRKI ++L +S TLIIF+NQV+ L
Sbjct: 233 ALRKIQHTLSRSETLIIFVNQVRTKL 258
>gi|356503420|ref|XP_003520507.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein recA homolog 2,
mitochondrial-like [Glycine max]
Length = 267
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 147/180 (81%), Gaps = 2/180 (1%)
Query: 34 ITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRF 92
+T IGMN SLSSAAE +F+ D HDD K KDNAL LALSQL ++F K SMLSL++
Sbjct: 1 MTRIGMNACSLSSAAEASDFECDVTHDDVKAADKDNALCLALSQLVSEFSKXSMLSLQKI 60
Query: 93 FGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCA 152
FG RR VIS GSLKL LALGI GLPKGRIVEIYGR+A+GKTT+AL +IKEAQKLGGYCA
Sbjct: 61 FGVRRARVISIGSLKLHLALGIRGLPKGRIVEIYGRDAAGKTTIALRIIKEAQKLGGYCA 120
Query: 153 YLDVENALDPSLAEAMGIDAENLL-IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALI 211
YLDVENALD SL E+MG+D ENLL I+ PD AENLLS+V TLTKSG++DVIV+DSV ++
Sbjct: 121 YLDVENALDFSLMESMGVDTENLLIISHPDCAENLLSMVVTLTKSGAVDVIVIDSVEGVM 180
>gi|148910572|gb|ABR18358.1| unknown [Picea sitchensis]
Length = 454
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 157/205 (76%)
Query: 56 EPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIG 115
E D K+ +K+ AL+ ALSQ+ + FGKE+++ L RF G R PVISTGSL LD+ALGIG
Sbjct: 85 EASGDDKLSEKEAALQAALSQIGSTFGKETVMWLGRFLGRRNVPVISTGSLNLDVALGIG 144
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
G PKGR+VEIYG EASGKTTL LH I EAQ+ GGYC ++D E+ALDPSLAEA+G+ ENL
Sbjct: 145 GFPKGRMVEIYGPEASGKTTLGLHTIAEAQRNGGYCVFIDAEHALDPSLAEAIGVKTENL 204
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
L+AQPD E LS+VDT +SGS+DVIVVDSVAAL+PK E+ + + Q+R+M+QA
Sbjct: 205 LLAQPDCGEQALSLVDTFIRSGSVDVIVVDSVAALVPKSELEGEMGDAHMAVQARLMSQA 264
Query: 236 LRKIHYSLCQSHTLIIFLNQVKVLL 260
LRK+ SL +S TL+IF+NQV+ L
Sbjct: 265 LRKLTPSLSRSQTLLIFINQVRSKL 289
>gi|357449857|ref|XP_003595205.1| RecA [Medicago truncatula]
gi|355484253|gb|AES65456.1| RecA [Medicago truncatula]
Length = 424
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 153/204 (75%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +KD AL+ A+ Q+ + FGK S++ L R + PV+STGS LD+ALG
Sbjct: 51 DGSDSGEENMSKKDLALQQAMDQITSTFGKGSIMWLGRTVSPKNVPVVSTGSFALDIALG 110
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
I GLPKGR+VEI+G EASGKTTLALHVI EAQK GGYCA++D E+ALD SLAE++G++ E
Sbjct: 111 IFGLPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHALDKSLAESIGVNTE 170
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGSIDVIVVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 171 NLLLSQPDCGEQALSLVDTLIRSGSIDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMS 230
Query: 234 QALRKIHYSLCQSHTLIIFLNQVK 257
QALRK+ +SL S ++IF+NQV+
Sbjct: 231 QALRKLCHSLSLSQCILIFINQVR 254
>gi|356558365|ref|XP_003547477.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Glycine max]
Length = 423
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 154/204 (75%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +KD AL+ A+ Q+ + +GK S++ L R + PV+STGS LD+ALG
Sbjct: 44 DGSDSGEENMSKKDMALQQAIDQITSAYGKGSIMWLGRSMAPKNVPVVSTGSFALDIALG 103
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
+GGLPKGR+VEI+G EASGKTTLALH+I EAQKLGGYCA++D E+ALD +LAE++G+D +
Sbjct: 104 VGGLPKGRVVEIFGPEASGKTTLALHMIAEAQKLGGYCAFVDAEHALDKTLAESIGVDTK 163
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGS+D IVVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 164 NLLLSQPDCGEQALSLVDTLIRSGSVDAIVVDSVAALVPKGELDGEMGDAHMAMQARLMS 223
Query: 234 QALRKIHYSLCQSHTLIIFLNQVK 257
QALRK+ +SL S +++F+NQV+
Sbjct: 224 QALRKLCHSLSLSQCILVFINQVR 247
>gi|356532732|ref|XP_003534925.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Glycine max]
Length = 432
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 158/218 (72%)
Query: 40 NIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP 99
+ S S+ + D + + +KD AL+ A+ Q+ + +GK S++ L R + P
Sbjct: 37 QVLSFSTRKRRSKSDGSDSGEENLSKKDLALQQAIDQITSAYGKGSIMWLGRSVAPKNVP 96
Query: 100 VISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENA 159
V+STGS LD+ALG+GGLPKGR+VEI+G EASGKTTLALHVI EAQK GGYCA++D E+A
Sbjct: 97 VVSTGSFALDIALGVGGLPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCAFVDAEHA 156
Query: 160 LDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVP 219
LD +LAE++G+D +NLL++QPD E LS+VDTL +SGS+D IVVDSVAAL+PK E+
Sbjct: 157 LDKTLAESIGVDTKNLLLSQPDCGEQALSLVDTLIRSGSVDAIVVDSVAALVPKGELDGE 216
Query: 220 INGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
+ + Q+R+M+QALRK+ +SL S ++IF+NQV+
Sbjct: 217 MGDAHMAMQARLMSQALRKLCHSLSLSQCILIFINQVR 254
>gi|115485181|ref|NP_001067734.1| Os11g0302700 [Oryza sativa Japonica Group]
gi|62732800|gb|AAX94919.1| recA protein, putative [Oryza sativa Japonica Group]
gi|77550150|gb|ABA92947.1| recA protein, expressed [Oryza sativa Japonica Group]
gi|113644956|dbj|BAF28097.1| Os11g0302700 [Oryza sativa Japonica Group]
gi|125576944|gb|EAZ18166.1| hypothetical protein OsJ_33715 [Oryza sativa Japonica Group]
gi|215707257|dbj|BAG93717.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 430
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 160/206 (77%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
++ + +A I +KD AL+ AL Q+ + FG+ES++ L +G + PVISTGS LD+ALGI
Sbjct: 57 EDGYSEANIKKKDFALQQALDQIKSAFGEESIMWLNHSYGPKEVPVISTGSFALDMALGI 116
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VEIYG EASGKTTLALH+I EAQK GGYCA++D E+ALDP+LAE++G+ AE+
Sbjct: 117 GGLPKGRVVEIYGPEASGKTTLALHIIAEAQKNGGYCAFIDAEHALDPTLAESIGVKAEH 176
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD E L + D L +SGSIDV+VVDSVAAL+PK E+ + + Q+R+M+Q
Sbjct: 177 LLLSQPDCGEQALGLADILIRSGSIDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQ 236
Query: 235 ALRKIHYSLCQSHTLIIFLNQVKVLL 260
ALRK+ +SL +S T+++F+NQV+ L
Sbjct: 237 ALRKLSHSLSRSRTMLVFINQVRSKL 262
>gi|125534156|gb|EAY80704.1| hypothetical protein OsI_35888 [Oryza sativa Indica Group]
Length = 430
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 160/206 (77%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
++ + +A I +KD AL+ AL Q+ + FG+ES++ L +G + PVISTGS LD+ALGI
Sbjct: 57 EDGYSEANIKKKDFALQQALDQIKSAFGEESIMWLNHSYGPKEVPVISTGSFALDMALGI 116
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLPKGR+VEIYG EASGKTTLALH+I EAQK GGYCA++D E+ALDP+LAE++G+ AE+
Sbjct: 117 GGLPKGRVVEIYGPEASGKTTLALHIIAEAQKNGGYCAFIDAEHALDPTLAESIGVKAEH 176
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD E L + D L +SGSIDV+VVDSVAAL+PK E+ + + Q+R+M+Q
Sbjct: 177 LLLSQPDCGEQALGLADILIRSGSIDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQ 236
Query: 235 ALRKIHYSLCQSHTLIIFLNQVKVLL 260
ALRK+ +SL +S T+++F+NQV+ L
Sbjct: 237 ALRKLSHSLSRSRTMLVFINQVRSKL 262
>gi|359484305|ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Vitis vinifera]
gi|297738654|emb|CBI27899.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 166/241 (68%), Gaps = 18/241 (7%)
Query: 20 SLFPSFSQNGRRDAITCIGMNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLAN 79
S F +FS GRR + + D ++ + +K+ ALR AL Q+
Sbjct: 30 SQFCNFSSKGRRRSKS------------------DGSDSNEENLSKKELALRQALDQITT 71
Query: 80 DFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALH 139
FGK S++ L R S+ PV+STGS LD+ LGIGGLPKGR+VEIYG EASGKTTLALH
Sbjct: 72 SFGKGSIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVEIYGPEASGKTTLALH 131
Query: 140 VIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSI 199
VI EAQK GGYC ++D E+ALDP+LAEA+G++ +NLL++QPD E LS+VDTL +SGS+
Sbjct: 132 VIAEAQKQGGYCVFVDAEHALDPALAEAIGVNTQNLLLSQPDCGEQALSLVDTLIRSGSV 191
Query: 200 DVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKVL 259
DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+ +SL S T++IF+NQV+
Sbjct: 192 DVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAK 251
Query: 260 L 260
L
Sbjct: 252 L 252
>gi|148260042|ref|YP_001234169.1| recombinase A [Acidiphilium cryptum JF-5]
gi|326403005|ref|YP_004283086.1| recombinase A [Acidiphilium multivorum AIU301]
gi|338988950|ref|ZP_08633843.1| Protein recA [Acidiphilium sp. PM]
gi|189039588|sp|A5FXB8.1|RECA_ACICJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|146401723|gb|ABQ30250.1| recA protein [Acidiphilium cryptum JF-5]
gi|325049866|dbj|BAJ80204.1| recombinase A [Acidiphilium multivorum AIU301]
gi|338206126|gb|EGO94369.1| Protein recA [Acidiphilium sp. PM]
Length = 343
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 145/195 (74%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K+ AL AL+Q+ FGK S++ + S VISTGSL LDLALGIGGLP+GR++
Sbjct: 1 MEKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S TL+IFLNQ+++
Sbjct: 181 SRSKTLVIFLNQIRL 195
>gi|119713373|gb|ABL97436.1| recA DNA recombination protein [uncultured marine bacterium
EB80_69G07]
Length = 382
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 147/199 (73%), Gaps = 7/199 (3%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPK 119
I +K+ AL A+SQ+ ++FGK S++ L G +R ISTGSL LDLALGIGGLPK
Sbjct: 19 IKEKNKALDAAISQITDNFGKGSVMKL----GEKRAMDIESISTGSLSLDLALGIGGLPK 74
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G++ E LLI+Q
Sbjct: 75 GRIIEVYGPESSGKTTLALQVVAEAQKAGGICAFVDAEHALDPVYAKKLGVNTEELLISQ 134
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL KSGSI VIV+DSVAAL PK EI + + QSR+M+QALRK+
Sbjct: 135 PDAGEQALEIADTLVKSGSISVIVIDSVAALTPKAEIEGEMGDHHVGLQSRLMSQALRKL 194
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ ++T++IF+NQ+++
Sbjct: 195 TGSISNTNTMMIFINQIRM 213
>gi|402771503|ref|YP_006591040.1| protein RecA (Recombinase A) [Methylocystis sp. SC2]
gi|401773523|emb|CCJ06389.1| Protein RecA (Recombinase A) [Methylocystis sp. SC2]
Length = 341
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 145/195 (74%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+V
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQKLGG CA++D E+ALDP A +G++ E+LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLTLHVIAEAQKLGGVCAFVDAEHALDPIYARKLGVNLEDLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDVQPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+TL+IF+NQ+++
Sbjct: 181 ARSNTLVIFINQIRM 195
>gi|254456368|ref|ZP_05069797.1| protein RecA [Candidatus Pelagibacter sp. HTCC7211]
gi|207083370|gb|EDZ60796.1| protein RecA [Candidatus Pelagibacter sp. HTCC7211]
Length = 382
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 147/199 (73%), Gaps = 7/199 (3%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPK 119
I +K+ AL A++Q+ ++FGK S++ L G +R +STGSL LDLALGIGGLPK
Sbjct: 19 IKEKNKALDAAIAQITDNFGKGSVMKL----GQKRAMDIESVSTGSLSLDLALGIGGLPK 74
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVE+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G++ E LLI+Q
Sbjct: 75 GRIVEVYGPESSGKTTLALQVVAEAQKAGGICAFVDAEHALDPVYAKKLGVNTEELLISQ 134
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL KSGSI VIV+DSVAAL PK EI + + QSR+M+QALRK+
Sbjct: 135 PDAGEQALEIADTLVKSGSISVIVIDSVAALTPKAEIEGEMGDHHVGLQSRLMSQALRKL 194
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ ++T++IF+NQ+++
Sbjct: 195 TSSISNTNTMMIFINQIRM 213
>gi|395786463|ref|ZP_10466190.1| protein recA [Bartonella tamiae Th239]
gi|423716644|ref|ZP_17690834.1| protein recA [Bartonella tamiae Th307]
gi|395422761|gb|EJF88957.1| protein recA [Bartonella tamiae Th239]
gi|395428718|gb|EJF94793.1| protein recA [Bartonella tamiae Th307]
Length = 360
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 142/197 (72%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGR
Sbjct: 12 KTVDKSKALDAALSQIERSFGKGSIMRLGQNEQVVEIETIPTGSLSLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALHTIAEAQKRGGICAFIDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SIARSNTMVIFINQIRM 208
>gi|406705826|ref|YP_006756179.1| recombinase A [alpha proteobacterium HIMB5]
gi|406651602|gb|AFS47002.1| RecA protein [alpha proteobacterium HIMB5]
Length = 385
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 147/199 (73%), Gaps = 7/199 (3%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPK 119
+ +K+ AL A+SQ+ ++FGK S++ L G +R +STGSL LDLALGIGGLPK
Sbjct: 19 LKEKNKALDAAISQITDNFGKGSVMKL----GEKRAMDVESVSTGSLSLDLALGIGGLPK 74
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G++ E LLI+Q
Sbjct: 75 GRIIEVYGPESSGKTTLALQVVAEAQKSGGICAFVDAEHALDPVYAKKLGVNTEELLISQ 134
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL KSGSI VIV+DSVAAL PK EI + + QSR+M+QALRK+
Sbjct: 135 PDTGEQALEIADTLVKSGSISVIVIDSVAALTPKAEIEGEMGDHHVGLQSRLMSQALRKL 194
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ ++T++IF+NQ+++
Sbjct: 195 TGSISNTNTMMIFINQIRM 213
>gi|357126357|ref|XP_003564854.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Brachypodium distachyon]
Length = 429
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 156/201 (77%), Gaps = 2/201 (0%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LDLALGIGGLPK
Sbjct: 57 EENMSKKDLALHQAIDQITSSFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPK 116
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGG--YCAYLDVENALDPSLAEAMGIDAENLLI 177
GR+VE+YG EASGKTTLALHVI EAQK GG YCA++D E+ALDPSLAE++G+D NLL+
Sbjct: 117 GRVVEVYGPEASGKTTLALHVIAEAQKHGGGGYCAFIDAEHALDPSLAESIGVDTSNLLL 176
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPDSAE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALR
Sbjct: 177 SQPDSAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALR 236
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ +SL S T+++F+NQ++
Sbjct: 237 KLSHSLSLSQTILLFINQIRA 257
>gi|456354260|dbj|BAM88705.1| recombinase A [Agromonas oligotrophica S58]
Length = 349
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGR+V
Sbjct: 1 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+SHT++IF+NQ+++
Sbjct: 181 NKSHTMVIFINQIRM 195
>gi|148256739|ref|YP_001241324.1| recombinase A [Bradyrhizobium sp. BTAi1]
gi|146408912|gb|ABQ37418.1| RecA protein [Bradyrhizobium sp. BTAi1]
Length = 362
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGR++
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRVI 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+SHT++IF+NQ+++
Sbjct: 194 NKSHTMVIFINQIRM 208
>gi|326528635|dbj|BAJ97339.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 156/200 (78%), Gaps = 2/200 (1%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ FGK +++ L R G R PV+STGS LDLALGIGGLPK
Sbjct: 56 EENMSKKDLALHQAIDQITTSFGKGAIMWLGRSEGHREVPVVSTGSFSLDLALGIGGLPK 115
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKL--GGYCAYLDVENALDPSLAEAMGIDAENLLI 177
GR++E+YG EASGKTTLALHVI EAQKL GGYCA++D E+ALDP+LAE++G+D NLL+
Sbjct: 116 GRVIEVYGPEASGKTTLALHVIAEAQKLSGGGYCAFVDAEHALDPTLAESIGVDTSNLLL 175
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPDSAE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALR
Sbjct: 176 SQPDSAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALR 235
Query: 238 KIHYSLCQSHTLIIFLNQVK 257
K+ +SL S T+++F+NQ++
Sbjct: 236 KLSHSLSLSQTVLLFINQIR 255
>gi|409400599|ref|ZP_11250623.1| recombinase A [Acidocella sp. MX-AZ02]
gi|409130485|gb|EKN00250.1| recombinase A [Acidocella sp. MX-AZ02]
Length = 364
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 146/195 (74%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
++K+ AL A++Q+ FGK S++ + G+ VIS+GSL LDLALGIGGLP+GR++
Sbjct: 21 LEKNKALDAAMAQIERAFGKGSIMRMGAKGGNEAIEVISSGSLGLDLALGIGGLPRGRVI 80
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 81 EIYGPESSGKTTLALHAVAEAQKRGGVCAFVDAEHALDPIYARKLGVDVDNLLISQPDTG 140
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SGSIDV+V+DSVAAL+P+ E+ + + +R+M+QALRKI S+
Sbjct: 141 EQGLEIADTLVRSGSIDVLVIDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKITGSV 200
Query: 244 CQSHTLIIFLNQVKV 258
+S+T +IFLNQ+++
Sbjct: 201 ARSNTTLIFLNQIRL 215
>gi|304570555|ref|YP_266064.2| recA protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 383
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 146/197 (74%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K+ AL A+SQ+ ++FGK S++ L G RR ISTGSL LD+ALGIGGLPKGR
Sbjct: 21 EKNKALDAAMSQIIDNFGKGSVMKL----GQRRAMDVESISTGSLSLDVALGIGGLPKGR 76
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++E+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G+D E LLI+QPD
Sbjct: 77 VIEVYGPESSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEELLISQPD 136
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL KSGSI VIV+DSVAAL P+ EI + + QSR+M+QALRK+
Sbjct: 137 TGEQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQALRKLTG 196
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ ++T++IF+NQ+++
Sbjct: 197 SISSTNTMMIFINQIRM 213
>gi|27380866|ref|NP_772395.1| recombinase A [Bradyrhizobium japonicum USDA 110]
gi|37537946|sp|Q89I84.1|RECA_BRAJA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|27354032|dbj|BAC51020.1| RecA protein [Bradyrhizobium japonicum USDA 110]
Length = 362
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+SHT++IF+NQ+++
Sbjct: 194 NKSHTMVIFINQIRM 208
>gi|91762224|ref|ZP_01264189.1| recA protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91718026|gb|EAS84676.1| recA protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 383
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 146/197 (74%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K+ AL A+SQ+ ++FGK S++ L G RR ISTGSL LD+ALGIGGLPKGR
Sbjct: 21 EKNKALDAAMSQIIDNFGKGSVMKL----GQRRAMDVESISTGSLSLDVALGIGGLPKGR 76
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++E+YG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G+D E LLI+QPD
Sbjct: 77 VIEVYGPESSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEELLISQPD 136
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL KSGSI VIV+DSVAAL P+ EI + + QSR+M+QALRK+
Sbjct: 137 TGEQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQALRKLTG 196
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ ++T++IF+NQ+++
Sbjct: 197 SISSTNTMMIFINQIRM 213
>gi|414161981|ref|ZP_11418228.1| protein recA [Afipia felis ATCC 53690]
gi|410879761|gb|EKS27601.1| protein recA [Afipia felis ATCC 53690]
Length = 360
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKTKALTAALSQIERQFGKGSVMRLGKADRSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+SHT++IF+NQ+++
Sbjct: 194 NKSHTMVIFINQIRM 208
>gi|398380107|ref|ZP_10538225.1| protein RecA [Rhizobium sp. AP16]
gi|397721423|gb|EJK81971.1| protein RecA [Rhizobium sp. AP16]
Length = 348
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 181 SKSNTMVIFINQIRM 195
>gi|323137974|ref|ZP_08073048.1| recA protein [Methylocystis sp. ATCC 49242]
gi|322396693|gb|EFX99220.1| recA protein [Methylocystis sp. ATCC 49242]
Length = 356
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 144/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+V
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQK+GG CA++D E+ALDP A +G++ E LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLTLHVIAEAQKMGGVCAFVDAEHALDPVYARKLGVNLEELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDVQPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+TL+IF+NQ+++
Sbjct: 194 ARSNTLVIFINQIRM 208
>gi|299131743|ref|ZP_07024938.1| recA protein [Afipia sp. 1NLS2]
gi|298591880|gb|EFI52080.1| recA protein [Afipia sp. 1NLS2]
Length = 360
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKTKALTAALSQIERQFGKGSVMRLGKADRSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+SHT++IF+NQ+++
Sbjct: 194 NKSHTMVIFINQIRM 208
>gi|146341855|ref|YP_001206903.1| recombinase A [Bradyrhizobium sp. ORS 278]
gi|146194661|emb|CAL78686.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 278]
Length = 362
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|365880391|ref|ZP_09419764.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 375]
gi|367472759|ref|ZP_09472335.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 285]
gi|365274942|emb|CCD84803.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 285]
gi|365291554|emb|CCD92295.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 375]
Length = 362
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|212274305|ref|NP_001130273.1| uncharacterized protein LOC100191367 [Zea mays]
gi|194688718|gb|ACF78443.1| unknown [Zea mays]
gi|413951639|gb|AFW84288.1| putative recA DNA recombination family protein [Zea mays]
Length = 430
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 155/199 (77%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LD+ALG GGLP
Sbjct: 60 DEESMSKKDLALHQAIDQITSAFGKGAIMWLGRSQGLRDVPVVSTGSFALDMALGTGGLP 119
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR++E+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE++G+D NLL++
Sbjct: 120 KGRVIEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVDTNNLLVS 179
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD AE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK
Sbjct: 180 QPDCAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRK 239
Query: 239 IHYSLCQSHTLIIFLNQVK 257
+ +SL S T+++F+NQ++
Sbjct: 240 LSHSLSLSQTVLLFINQIR 258
>gi|293332481|ref|NP_001170211.1| uncharacterized protein LOC100384162 [Zea mays]
gi|224034357|gb|ACN36254.1| unknown [Zea mays]
gi|414879173|tpg|DAA56304.1| TPA: putative recA DNA recombination family protein [Zea mays]
Length = 425
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 155/199 (77%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGSL LD+ALG GGLPK
Sbjct: 56 EENMSKKDLALHQAIDQITSAFGKGAIMWLGRSQGHRDVPVVSTGSLDLDMALGTGGLPK 115
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+VE+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE++G+D NLL++Q
Sbjct: 116 GRVVEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIGVDTNNLLLSQ 175
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD AE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 176 PDCAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHIALQARLMSQALRKL 235
Query: 240 HYSLCQSHTLIIFLNQVKV 258
+SL S T+++F+NQ++
Sbjct: 236 SHSLSLSQTILLFINQIRA 254
>gi|222086163|ref|YP_002544695.1| recombinase A [Agrobacterium radiobacter K84]
gi|254790417|sp|B9JFS7.1|RECA_AGRRK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|221723611|gb|ACM26767.1| recombinase A protein [Agrobacterium radiobacter K84]
Length = 361
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|163794127|ref|ZP_02188100.1| RecA protein [alpha proteobacterium BAL199]
gi|159180741|gb|EDP65260.1| RecA protein [alpha proteobacterium BAL199]
Length = 360
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 143/194 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + G+ +STGS+ LD+ALGIGGLP+GR+V
Sbjct: 13 MDKSKALEAALSQIERAFGKGSVMKLGQREGAVEIDTVSTGSIGLDIALGIGGLPRGRVV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL+LHV+ EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLSLHVVAEAQKAGGTCAFVDAEHALDPIYARKLGVDVDELLISQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + Q+R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDTHVGLQARLMSQALRKLTGSI 192
Query: 244 CQSHTLIIFLNQVK 257
+S ++IF+NQ++
Sbjct: 193 SKSRCMVIFINQIR 206
>gi|338975244|ref|ZP_08630599.1| RecA protein [Bradyrhizobiaceae bacterium SG-6C]
gi|414167541|ref|ZP_11423769.1| protein recA [Afipia clevelandensis ATCC 49720]
gi|338231843|gb|EGP06978.1| RecA protein [Bradyrhizobiaceae bacterium SG-6C]
gi|410889873|gb|EKS37674.1| protein recA [Afipia clevelandensis ATCC 49720]
Length = 362
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKTKALSAALSQIERQFGKGSVMKLGKNDRSMEVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+SHT++IF+NQ+++
Sbjct: 194 NKSHTMVIFINQIRM 208
>gi|365898638|ref|ZP_09436583.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3843]
gi|365420549|emb|CCE09125.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3843]
Length = 362
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S ISTGSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDIETISTGSLGLDVALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|365891769|ref|ZP_09430150.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3809]
gi|365332255|emb|CCE02681.1| Recombinase A (recA) [Bradyrhizobium sp. STM 3809]
Length = 349
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEICDTLVRSGAVDVMVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 181 NKSNTMVIFINQIRM 195
>gi|365855071|ref|ZP_09395128.1| RecA protein [Acetobacteraceae bacterium AT-5844]
gi|363719510|gb|EHM02817.1| RecA protein [Acetobacteraceae bacterium AT-5844]
Length = 353
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K+ AL ALSQ+ FGK S++ + S VI TGSL LDLALGIGGLPKGRI+
Sbjct: 8 MDKNKALDAALSQIERAFGKGSIMRMGAKQQSDEVEVIPTGSLGLDLALGIGGLPKGRII 67
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 68 EIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 127
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ ++
Sbjct: 128 EQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGTV 187
Query: 244 CQSHTLIIFLNQVKV 258
+S+ L+IFLNQ+++
Sbjct: 188 SRSNCLLIFLNQIRL 202
>gi|258541148|ref|YP_003186581.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01]
gi|384041069|ref|YP_005479813.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-12]
gi|384049584|ref|YP_005476647.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-03]
gi|384052694|ref|YP_005485788.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-07]
gi|384055926|ref|YP_005488593.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-22]
gi|384058567|ref|YP_005497695.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-26]
gi|384061861|ref|YP_005482503.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-32]
gi|384117937|ref|YP_005500561.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632226|dbj|BAH98201.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01]
gi|256635283|dbj|BAI01252.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-03]
gi|256638338|dbj|BAI04300.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-07]
gi|256641392|dbj|BAI07347.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-22]
gi|256644447|dbj|BAI10395.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-26]
gi|256647502|dbj|BAI13443.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-32]
gi|256650555|dbj|BAI16489.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653546|dbj|BAI19473.1| DNA recombinase RecA [Acetobacter pasteurianus IFO 3283-12]
Length = 398
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R VI TGSL LD+ALGIGGLP+G
Sbjct: 58 MDKAKALEGALGQIERAFGKGSVMRL----GQRPKVEADVIPTGSLGLDIALGIGGLPRG 113
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R+VEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDPS A+ +G+D +NLLI+QP
Sbjct: 114 RVVEIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPSYAKKLGVDVDNLLISQP 173
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 174 DTGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 233
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL+IFLNQ+++
Sbjct: 234 GTVARSNTLMIFLNQIRL 251
>gi|260883955|ref|ZP_05895569.1| recombinase A [Brucella abortus bv. 9 str. C68]
gi|261222365|ref|ZP_05936646.1| recombinase A [Brucella ceti B1/94]
gi|265988866|ref|ZP_06101423.1| recombinase A [Brucella pinnipedialis M292/94/1]
gi|265991280|ref|ZP_06103837.1| recombinase A [Brucella melitensis bv. 1 str. Rev.1]
gi|265995117|ref|ZP_06107674.1| recombinase A [Brucella melitensis bv. 3 str. Ether]
gi|265998330|ref|ZP_06110887.1| recombinase A [Brucella ceti M490/95/1]
gi|294852537|ref|ZP_06793210.1| RecA protein [Brucella sp. NVSL 07-0026]
gi|376273069|ref|YP_005151647.1| recA protein [Brucella abortus A13334]
gi|376276188|ref|YP_005116627.1| recA protein [Brucella canis HSK A52141]
gi|384211568|ref|YP_005600650.1| recA protein [Brucella melitensis M5-90]
gi|384408675|ref|YP_005597296.1| RecA bacterial DNA recombination protein [Brucella melitensis M28]
gi|384445257|ref|YP_005603976.1| recA protein [Brucella melitensis NI]
gi|260873483|gb|EEX80552.1| recombinase A [Brucella abortus bv. 9 str. C68]
gi|260920949|gb|EEX87602.1| recombinase A [Brucella ceti B1/94]
gi|262552798|gb|EEZ08788.1| recombinase A [Brucella ceti M490/95/1]
gi|262766230|gb|EEZ12019.1| recombinase A [Brucella melitensis bv. 3 str. Ether]
gi|263002064|gb|EEZ14639.1| recombinase A [Brucella melitensis bv. 1 str. Rev.1]
gi|264661063|gb|EEZ31324.1| recombinase A [Brucella pinnipedialis M292/94/1]
gi|294821126|gb|EFG38125.1| RecA protein [Brucella sp. NVSL 07-0026]
gi|326409222|gb|ADZ66287.1| RecA bacterial DNA recombination protein [Brucella melitensis M28]
gi|326538931|gb|ADZ87146.1| recA protein [Brucella melitensis M5-90]
gi|349743248|gb|AEQ08791.1| recA protein [Brucella melitensis NI]
gi|363400675|gb|AEW17645.1| recA protein [Brucella abortus A13334]
gi|363404755|gb|AEW15050.1| recA protein [Brucella canis HSK A52141]
Length = 348
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 SRSNCMVIFINQIRM 195
>gi|261325290|ref|ZP_05964487.1| recombinase A [Brucella neotomae 5K33]
gi|261301270|gb|EEY04767.1| recombinase A [Brucella neotomae 5K33]
Length = 348
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 SRSNCMVIFINQIRM 195
>gi|408378032|ref|ZP_11175631.1| recombinase A [Agrobacterium albertimagni AOL15]
gi|407748146|gb|EKF59663.1| recombinase A [Agrobacterium albertimagni AOL15]
Length = 362
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 192 SISKSKTMVIFINQIRM 208
>gi|421850101|ref|ZP_16283069.1| DNA recombinase RecA [Acetobacter pasteurianus NBRC 101655]
gi|371459097|dbj|GAB28272.1| DNA recombinase RecA [Acetobacter pasteurianus NBRC 101655]
Length = 344
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R VI TGSL LD+ALGIGGLP+G
Sbjct: 4 MDKAKALEGALGQIERAFGKGSVMRL----GQRPKVEADVIPTGSLGLDIALGIGGLPRG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R+VEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDPS A+ +G+D +NLLI+QP
Sbjct: 60 RVVEIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPSYAKKLGVDVDNLLISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 120 DTGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL+IFLNQ+++
Sbjct: 180 GTVARSNTLMIFLNQIRL 197
>gi|312115731|ref|YP_004013327.1| recA protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220860|gb|ADP72228.1| recA protein [Rhodomicrobium vannielii ATCC 17100]
Length = 378
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ +FGK S++ L + ISTGSL LD+ALGIGGLP+GR+V
Sbjct: 16 MDKQKALEAALSQIERNFGKGSVMRLGKNDKLVEVEAISTGSLGLDIALGIGGLPRGRVV 75
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALHVI EAQK GG C ++D E+ALDP A +G++ E L+I+QPD+
Sbjct: 76 EIFGPESSGKTTLALHVIAEAQKKGGSCGFVDAEHALDPGYARKLGVNLEELIISQPDAG 135
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDVIVVDSVAAL PK EI + + Q+R+M+QALRK+ S+
Sbjct: 136 EQALEITDTLVRSGAIDVIVVDSVAALTPKAEIEGEMGDVLPGMQARLMSQALRKLTGSI 195
Query: 244 CQSHTLIIFLNQVKV 258
+S+ L+IF+NQ+++
Sbjct: 196 SKSNCLVIFINQIRM 210
>gi|405382935|ref|ZP_11036711.1| protein RecA [Rhizobium sp. CF142]
gi|397320696|gb|EJJ25128.1| protein RecA [Rhizobium sp. CF142]
Length = 363
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 144/201 (71%), Gaps = 8/201 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS V +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSNESIVEIETVSTGSLSLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI
Sbjct: 68 PKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+T++IF+NQ+++
Sbjct: 188 KLTASISKSNTMVIFINQIRM 208
>gi|440226825|ref|YP_007333916.1| recombination protein RecA [Rhizobium tropici CIAT 899]
gi|440038336|gb|AGB71370.1| recombination protein RecA [Rhizobium tropici CIAT 899]
Length = 361
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|340779200|ref|ZP_08699143.1| recA protein [Acetobacter aceti NBRC 14818]
Length = 343
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ L G R ISTGSL LD+ALGIGG+P+G
Sbjct: 3 MDKTKALEGALSQIERAFGKGSIMRL----GQRPKEEADAISTGSLGLDIALGIGGMPRG 58
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH+I EAQK GG CA++D E+ALDP A +G+D +NLLI+QP
Sbjct: 59 RIVEIYGPESSGKTTLALHIIAEAQKKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQP 118
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 119 DAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 178
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL++FLNQ+++
Sbjct: 179 GTVSRSNTLLVFLNQIRL 196
>gi|90818644|emb|CAJ32627.1| recombinase A [Ochrobactrum anthropi]
gi|90818646|emb|CAJ32628.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 143/201 (71%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+ ++IF+NQ+++
Sbjct: 188 KLTASISRSNCMVIFINQIRM 208
>gi|90818650|emb|CAJ32630.1| recombinase A [Ochrobactrum anthropi]
gi|90818652|emb|CAJ32631.1| recombinase A [Ochrobactrum anthropi]
gi|90818666|emb|CAJ32638.1| recombinase A [Ochrobactrum intermedium]
Length = 355
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 143/201 (71%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+ ++IF+NQ+++
Sbjct: 188 KLTASISRSNCMVIFINQIRM 208
>gi|430003827|emb|CCF19618.1| Recombinase A (recA) [Rhizobium sp.]
Length = 348
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALDAALSQIERSFGKGSIMKLGAKENVVETETVSTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 SRSNCMVIFINQIRM 195
>gi|347736632|ref|ZP_08869218.1| RecA protein [Azospirillum amazonense Y2]
gi|346919818|gb|EGY01190.1| RecA protein [Azospirillum amazonense Y2]
Length = 358
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L S ISTGSL LD+ALGIGGLP+GRI+
Sbjct: 12 MDKQKALDAALGQIERAFGKGSIMKLGAKEASMEVDAISTGSLGLDIALGIGGLPRGRII 71
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDPS A +G++ ++LL++QPD+
Sbjct: 72 EIYGPESSGKTTLALHAIAEAQKSGGTCAFVDAEHALDPSYARKLGVNVDDLLVSQPDAG 131
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + Q+R+M+QALRK+ S+
Sbjct: 132 EQALEITDTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTSSI 191
Query: 244 CQSHTLIIFLNQVKV 258
+S+ L+IF+NQ+++
Sbjct: 192 SKSNCLVIFINQIRL 206
>gi|162148079|ref|YP_001602540.1| protein recA (recombinase A) [Gluconacetobacter diazotrophicus PAl
5]
gi|161786656|emb|CAP56239.1| Protein recA (Recombinase A) [Gluconacetobacter diazotrophicus PAl
5]
Length = 381
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKG 120
+ K AL ALSQ+ FGK S++ L G R VISTGSL LD+ALGIGGLP+G
Sbjct: 38 IDKSKALEGALSQIERAFGKGSVMRL----GQRANEAVDVISTGSLGLDIALGIGGLPRG 93
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D +NLLI+QP
Sbjct: 94 RIVEIYGPESSGKTTLALHAIAEAQKKGGVCAFIDAEHALDPGYARKLGVDVDNLLISQP 153
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 154 DAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 213
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+T++IFLNQ+++
Sbjct: 214 GTVSRSNTMMIFLNQIRL 231
>gi|37700516|gb|AAR00257.1| RecA [Azospirillum lipoferum]
Length = 369
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L VISTGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVISTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + S +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDAMSGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ L+IF+NQ+++
Sbjct: 194 SKSNCLVIFINQIRL 208
>gi|420244107|ref|ZP_14747942.1| protein RecA [Rhizobium sp. CF080]
gi|398056095|gb|EJL48120.1| protein RecA [Rhizobium sp. CF080]
Length = 362
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 144/201 (71%), Gaps = 8/201 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS V +STGSL LD+ALGIGGL
Sbjct: 12 KGVDKSKALEAALSQIERSFGKGSIMKL----GSNENIVEIETVSTGSLSLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+T++IF+NQ+++
Sbjct: 188 KLTASISKSNTMVIFINQIRM 208
>gi|90818648|emb|CAJ32629.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 143/201 (71%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDKVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+ ++IF+NQ+++
Sbjct: 188 KLTASISRSNCMVIFINQIRM 208
>gi|209542693|ref|YP_002274922.1| recA protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530370|gb|ACI50307.1| recA protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 350
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKG 120
+ K AL ALSQ+ FGK S++ L G R VISTGSL LD+ALGIGGLP+G
Sbjct: 7 IDKSKALEGALSQIERAFGKGSVMRL----GQRANEAVDVISTGSLGLDIALGIGGLPRG 62
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D +NLLI+QP
Sbjct: 63 RIVEIYGPESSGKTTLALHAIAEAQKKGGVCAFIDAEHALDPGYARKLGVDVDNLLISQP 122
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 123 DAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 182
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+T++IFLNQ+++
Sbjct: 183 GTVSRSNTMMIFLNQIRL 200
>gi|114707287|ref|ZP_01440184.1| recombinase A [Fulvimarina pelagi HTCC2506]
gi|114537168|gb|EAU40295.1| recombinase A [Fulvimarina pelagi HTCC2506]
Length = 357
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGR++EI
Sbjct: 16 KTKALDAALSQIERAFGKGSIMKLGQNNQSVEVETVSTGSLGLDIALGIGGLPKGRVIEI 75
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLL++QPD+ E
Sbjct: 76 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLVSQPDTGEQ 135
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 136 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTGSISR 195
Query: 246 SHTLIIFLNQVKV 258
S ++IF+NQ+++
Sbjct: 196 SKCMVIFINQIRM 208
>gi|75675472|ref|YP_317893.1| recombinase A [Nitrobacter winogradskyi Nb-255]
gi|123745720|sp|Q3ST50.1|RECA_NITWN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|74420342|gb|ABA04541.1| RecA protein [Nitrobacter winogradskyi Nb-255]
Length = 362
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 144/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 EVYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|89473577|emb|CAJ34601.1| recombinase A [Ochrobactrum lupini]
gi|89473579|emb|CAJ34602.1| recombinase A [Ochrobactrum anthropi]
gi|90818638|emb|CAJ32624.1| recombinase A [Ochrobactrum anthropi ATCC 49188]
gi|90818640|emb|CAJ32625.1| recombinase A [Ochrobactrum anthropi]
gi|90818642|emb|CAJ32626.1| recombinase A [Ochrobactrum tritici]
gi|90818654|emb|CAJ32632.1| recombinase A [Ochrobactrum anthropi]
gi|90818660|emb|CAJ32635.1| recombinase A [Ochrobactrum anthropi]
gi|90818662|emb|CAJ32636.1| recombinase A [Ochrobactrum anthropi]
gi|90818674|emb|CAJ43897.1| recombinase A [Ochrobactrum anthropi]
gi|343131440|gb|AEL89247.1| recombinase A, partial [Ochrobactrum anthropi]
Length = 355
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 144/206 (69%), Gaps = 10/206 (4%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLAL 112
H + + K AL ALSQ+ FGK S++ L + PVI TGSL LD+AL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIAL 62
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D
Sbjct: 63 GVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDL 122
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M
Sbjct: 123 ENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLM 182
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 183 SQALRKLTASISRSNCMVIFINQIRM 208
>gi|343131436|gb|AEL89245.1| recombinase A, partial [Ochrobactrum pecoris]
gi|343131438|gb|AEL89246.1| recombinase A, partial [Ochrobactrum pecoris]
Length = 355
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 143/201 (71%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+ ++IF+NQ+++
Sbjct: 188 KLTASISRSNCMVIFINQIRM 208
>gi|132236|sp|P24074.1|RECA_RHILV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|581514|emb|CAA42578.1| RecA protein [Rhizobium leguminosarum]
Length = 351
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 142/199 (71%), Gaps = 8/199 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPK 119
M K AL ALSQ+ FGK S++ L GS V ISTGSL LD+ALG+GGLP+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKL----GSNENVVEIETISTGSLGLDIALGVGGLPR 56
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+Q
Sbjct: 57 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 116
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG +DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 117 PDTGEQALEITDTLVRSGRVDVLVVDSVAALTPRAEIEGEMGDTVPGLQARLMSQALRKL 176
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 177 TASISKSNTMVIFINQIRM 195
>gi|254692312|emb|CBA10404.1| recombinase A [Agrobacterium larrymoorei]
Length = 323
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 181 SISKSKTMVIFINQIRM 197
>gi|414174616|ref|ZP_11429020.1| protein recA [Afipia broomeae ATCC 49717]
gi|410888445|gb|EKS36248.1| protein recA [Afipia broomeae ATCC 49717]
Length = 362
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VI +GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKTKALSAALSQIERQFGKGSVMKLGKNDRSMDIEVIPSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+SHT++IF+NQ+++
Sbjct: 194 NKSHTMVIFINQIRM 208
>gi|421588720|ref|ZP_16033969.1| recombinase A [Rhizobium sp. Pop5]
gi|403706515|gb|EJZ21764.1| recombinase A [Rhizobium sp. Pop5]
Length = 362
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|340629638|gb|AEK64741.1| recombinase protein A [Rhizobium leguminosarum bv. phaseoli]
gi|340629640|gb|AEK64742.1| recombinase protein A [Rhizobium leguminosarum bv. phaseoli]
Length = 201
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 141/198 (71%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+
Sbjct: 4 EXKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPR 63
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+Q
Sbjct: 64 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 123
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 124 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 183
Query: 240 HYSLCQSHTLIIFLNQVK 257
S+ +S+T++IF+NQV+
Sbjct: 184 TASISKSNTMVIFINQVR 201
>gi|383770750|ref|YP_005449813.1| recombinase A [Bradyrhizobium sp. S23321]
gi|381358871|dbj|BAL75701.1| recombinase A [Bradyrhizobium sp. S23321]
Length = 362
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAISSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|296448224|ref|ZP_06890120.1| recA protein [Methylosinus trichosporium OB3b]
gi|296254264|gb|EFH01395.1| recA protein [Methylosinus trichosporium OB3b]
Length = 358
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+V
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNQKAVEIETISTGSLGLDIALGVGGLPRGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQK GG CA++D E+ALDP A +G++ E LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLTLHVIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLEELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGEVQPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+TL+IF+NQ+++
Sbjct: 194 SRSNTLVIFINQIRM 208
>gi|444310432|ref|ZP_21146054.1| recombinase A [Ochrobactrum intermedium M86]
gi|443486240|gb|ELT49020.1| recombinase A [Ochrobactrum intermedium M86]
Length = 361
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>gi|209884571|ref|YP_002288428.1| recombinase A [Oligotropha carboxidovorans OM5]
gi|337741760|ref|YP_004633488.1| recombinase A [Oligotropha carboxidovorans OM5]
gi|386030776|ref|YP_005951551.1| recombinase A [Oligotropha carboxidovorans OM4]
gi|209872767|gb|ACI92563.1| protein RecA [Oligotropha carboxidovorans OM5]
gi|336095844|gb|AEI03670.1| recombinase A [Oligotropha carboxidovorans OM4]
gi|336099424|gb|AEI07247.1| recombinase A [Oligotropha carboxidovorans OM5]
Length = 360
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 144/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKTKALTAALSQIERQFGKGSVMRLGKNDRSMDIEVISSGSLGLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHAVAEAQKKGGTCAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|339777263|gb|AEK05528.1| recombinase A [Agrobacterium larrymoorei]
Length = 198
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 138/195 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 4 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGR 63
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 64 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 123
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 124 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 183
Query: 242 SLCQSHTLIIFLNQV 256
S+ +S T++IF+NQV
Sbjct: 184 SISKSKTMVIFINQV 198
>gi|241204889|ref|YP_002975985.1| recombinase A [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858779|gb|ACS56446.1| recA protein [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 364
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|384217676|ref|YP_005608842.1| recombinase A [Bradyrhizobium japonicum USDA 6]
gi|354956575|dbj|BAL09254.1| RecA protein [Bradyrhizobium japonicum USDA 6]
Length = 362
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|343131434|gb|AEL89244.1| recombinase A, partial [Ochrobactrum pecoris]
Length = 355
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 143/201 (71%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
H + + K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGL
Sbjct: 8 HVEDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+ ++IF+NQ+++
Sbjct: 188 KLTASISRSNCMVIFINQIRM 208
>gi|85715199|ref|ZP_01046183.1| recombinase A [Nitrobacter sp. Nb-311A]
gi|85698114|gb|EAQ35987.1| recombinase A [Nitrobacter sp. Nb-311A]
Length = 362
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 144/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S V+S+GSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVVSSGSLGLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 EVYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|218463763|ref|ZP_03503854.1| recombinase A [Rhizobium etli Kim 5]
Length = 362
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|398826393|ref|ZP_10584638.1| protein RecA [Bradyrhizobium sp. YR681]
gi|398221156|gb|EJN07582.1| protein RecA [Bradyrhizobium sp. YR681]
Length = 362
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|424881821|ref|ZP_18305453.1| protein RecA [Rhizobium leguminosarum bv. trifolii WU95]
gi|392518184|gb|EIW42916.1| protein RecA [Rhizobium leguminosarum bv. trifolii WU95]
Length = 364
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|339777251|gb|AEK05522.1| recombinase A [Rhizobium tibeticum]
gi|348549375|gb|AEP69205.1| recombinase A [Rhizobium tibeticum]
Length = 196
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 139/196 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNESVVEIETVSTGSLGLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVK 257
S+ +S T++IF+NQV+
Sbjct: 181 SISKSKTMVIFINQVR 196
>gi|398831799|ref|ZP_10589975.1| protein RecA [Phyllobacterium sp. YR531]
gi|398211501|gb|EJM98119.1| protein RecA [Phyllobacterium sp. YR531]
Length = 364
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L R + TGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERSFGKGSIMRLGRNEQVVEIETVPTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>gi|218675164|ref|ZP_03524833.1| recombinase A [Rhizobium etli GR56]
Length = 349
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 181 SKSNTMVIFINQIRM 195
>gi|329114759|ref|ZP_08243516.1| Protein RecA [Acetobacter pomorum DM001]
gi|326695890|gb|EGE47574.1| Protein RecA [Acetobacter pomorum DM001]
Length = 367
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 144/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R VI TGSL LD+ALGIGGLP+G
Sbjct: 27 MDKAKALEGALGQIERAFGKGSVMRL----GQRPKVEADVIPTGSLGLDIALGIGGLPRG 82
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R+VEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A+ +G+D +NLLI+QP
Sbjct: 83 RVVEIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYAKKLGVDVDNLLISQP 142
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 143 DAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 202
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL+IFLNQ+++
Sbjct: 203 GTVARSNTLMIFLNQIRL 220
>gi|90818656|emb|CAJ32633.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 143/206 (69%), Gaps = 10/206 (4%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLAL 112
H + + K AL ALSQ+ FGK S++ L + PVI TGSL LD+AL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIAL 62
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D
Sbjct: 63 GVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDL 122
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M
Sbjct: 123 ENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLM 182
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+QALRK+ S+ +S ++IF+NQ+++
Sbjct: 183 SQALRKLTASISRSSCMVIFINQIRM 208
>gi|218515602|ref|ZP_03512442.1| recombinase A [Rhizobium etli 8C-3]
Length = 297
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 181 SKSNTMVIFINQIRM 195
>gi|306840332|ref|ZP_07473104.1| recA protein [Brucella sp. BO2]
gi|306289731|gb|EFM60920.1| recA protein [Brucella sp. BO2]
Length = 389
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 42 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 101
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 102 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 161
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 162 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 221
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 222 SRSNCMVIFINQIRM 236
>gi|260758162|ref|ZP_05870510.1| recombinase A [Brucella abortus bv. 4 str. 292]
gi|260761988|ref|ZP_05874331.1| recombinase A [Brucella abortus bv. 2 str. 86/8/59]
gi|260668480|gb|EEX55420.1| recombinase A [Brucella abortus bv. 4 str. 292]
gi|260672420|gb|EEX59241.1| recombinase A [Brucella abortus bv. 2 str. 86/8/59]
Length = 420
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 73 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 132
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 133 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 192
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 193 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 252
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 253 SRSNCMVIFINQIRM 267
>gi|378826124|ref|YP_005188856.1| recombinase A [Sinorhizobium fredii HH103]
gi|365179176|emb|CCE96031.1| RecA protein [Sinorhizobium fredii HH103]
Length = 361
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 144/201 (71%), Gaps = 8/201 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS+ + +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSKDSVIEIETVSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRIVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+ ++IF+NQ+++
Sbjct: 188 KLTASISKSNCMVIFINQIRM 208
>gi|163843467|ref|YP_001627871.1| recombinase A [Brucella suis ATCC 23445]
gi|189039592|sp|B0CH00.1|RECA_BRUSI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|163674190|gb|ABY38301.1| recA protein [Brucella suis ATCC 23445]
Length = 361
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>gi|295810382|emb|CBL81075.1| recombinase A [Agrobacterium larrymoorei]
Length = 319
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 138/193 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVKV 258
S T++IF+NQ+++
Sbjct: 181 SKTMVIFINQIRM 193
>gi|237815621|ref|ZP_04594618.1| recA protein [Brucella abortus str. 2308 A]
gi|237788919|gb|EEP63130.1| recA protein [Brucella abortus str. 2308 A]
Length = 424
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 77 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 136
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 137 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 196
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 197 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 256
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 257 SRSNCMVIFINQIRM 271
>gi|148559731|ref|YP_001259122.1| recombinase A [Brucella ovis ATCC 25840]
gi|148370988|gb|ABQ60967.1| protein RecA [Brucella ovis ATCC 25840]
Length = 424
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 77 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 136
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 137 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 196
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 197 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 256
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 257 SRSNCMVIFINQIRM 271
>gi|116252383|ref|YP_768221.1| recombinase A [Rhizobium leguminosarum bv. viciae 3841]
gi|424870873|ref|ZP_18294535.1| protein RecA [Rhizobium leguminosarum bv. viciae WSM1455]
gi|122988509|sp|Q1MFZ8.1|RECA_RHIL3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|115257031|emb|CAK08125.1| putative recombinase [Rhizobium leguminosarum bv. viciae 3841]
gi|393166574|gb|EJC66621.1| protein RecA [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 364
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 144/201 (71%), Gaps = 8/201 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS V ISTGSL LD+ALG+GGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSNENVVEIETISTGSLGLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI
Sbjct: 68 PRGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+T++IF+NQ+++
Sbjct: 188 KLTASISKSNTMVIFINQIRM 208
>gi|225627673|ref|ZP_03785710.1| recA protein [Brucella ceti str. Cudo]
gi|225617678|gb|EEH14723.1| recA protein [Brucella ceti str. Cudo]
Length = 424
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 77 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 136
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 137 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 196
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 197 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 256
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 257 SRSNCMVIFINQIRM 271
>gi|347761691|ref|YP_004869252.1| DNA recombinase RecA [Gluconacetobacter xylinus NBRC 3288]
gi|347580661|dbj|BAK84882.1| DNA recombinase RecA [Gluconacetobacter xylinus NBRC 3288]
Length = 348
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + S + VISTGSL LD+ALGIGGLP+GRIV
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-SEQVDVISTGSLGLDIALGIGGLPRGRIV 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IFLNQ+++
Sbjct: 186 SRSNTMLIFLNQIRL 200
>gi|339018114|ref|ZP_08644256.1| DNA recombinase RecA [Acetobacter tropicalis NBRC 101654]
gi|338752779|dbj|GAA07560.1| DNA recombinase RecA [Acetobacter tropicalis NBRC 101654]
Length = 340
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R + VI TGSL LD+ALGIGGLP+G
Sbjct: 1 MDKAKALEGALGQIERAFGKGSVMRL----GQRPREQADVIPTGSLGLDIALGIGGLPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A+ +G+D +NLLI+QP
Sbjct: 57 RVIEIYGPESSGKTTLALHAIAEAQKRGGTCAFIDAEHALDPGYAKKLGVDVDNLLISQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S+T++IFLNQ+++
Sbjct: 177 GSVSRSNTMMIFLNQIRL 194
>gi|23502079|ref|NP_698206.1| recombinase A [Brucella suis 1330]
gi|62290113|ref|YP_221906.1| recombinase A [Brucella abortus bv. 1 str. 9-941]
gi|82700036|ref|YP_414610.1| recombinase A [Brucella melitensis biovar Abortus 2308]
gi|161619157|ref|YP_001593044.1| recombinase A [Brucella canis ATCC 23365]
gi|189024351|ref|YP_001935119.1| recombinase A [Brucella abortus S19]
gi|225852698|ref|YP_002732931.1| recombinase A [Brucella melitensis ATCC 23457]
gi|229220681|ref|NP_539704.2| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260546662|ref|ZP_05822401.1| recombinase A [Brucella abortus NCTC 8038]
gi|260565545|ref|ZP_05836029.1| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260566268|ref|ZP_05836738.1| recombinase A [Brucella suis bv. 4 str. 40]
gi|260754946|ref|ZP_05867294.1| recombinase A [Brucella abortus bv. 6 str. 870]
gi|261214198|ref|ZP_05928479.1| recombinase A [Brucella abortus bv. 3 str. Tulya]
gi|261219550|ref|ZP_05933831.1| recombinase A [Brucella ceti M13/05/1]
gi|261314076|ref|ZP_05953273.1| recombinase [Brucella pinnipedialis M163/99/10]
gi|261317836|ref|ZP_05957033.1| recombinase A [Brucella pinnipedialis B2/94]
gi|261322045|ref|ZP_05961242.1| recombinase A [Brucella ceti M644/93/1]
gi|261752510|ref|ZP_05996219.1| recombinase A [Brucella suis bv. 5 str. 513]
gi|261755169|ref|ZP_05998878.1| recombinase A [Brucella suis bv. 3 str. 686]
gi|261758393|ref|ZP_06002102.1| recombinase A [Brucella sp. F5/99]
gi|265984260|ref|ZP_06096995.1| recombinase A [Brucella sp. 83/13]
gi|265999433|ref|ZP_05466343.2| recombinase A [Brucella melitensis bv. 2 str. 63/9]
gi|306838011|ref|ZP_07470869.1| recA protein [Brucella sp. NF 2653]
gi|306844103|ref|ZP_07476697.1| recA protein [Brucella inopinata BO1]
gi|340790820|ref|YP_004756285.1| recombinase A [Brucella pinnipedialis B2/94]
gi|376280873|ref|YP_005154879.1| recombinase A [Brucella suis VBI22]
gi|384224867|ref|YP_005616031.1| recombinase A [Brucella suis 1330]
gi|423166703|ref|ZP_17153406.1| protein recA [Brucella abortus bv. 1 str. NI435a]
gi|423170923|ref|ZP_17157598.1| protein recA [Brucella abortus bv. 1 str. NI474]
gi|423172995|ref|ZP_17159666.1| protein recA [Brucella abortus bv. 1 str. NI486]
gi|423178312|ref|ZP_17164956.1| protein recA [Brucella abortus bv. 1 str. NI488]
gi|423180353|ref|ZP_17166994.1| protein recA [Brucella abortus bv. 1 str. NI010]
gi|423183485|ref|ZP_17170122.1| protein recA [Brucella abortus bv. 1 str. NI016]
gi|423185575|ref|ZP_17172189.1| protein recA [Brucella abortus bv. 1 str. NI021]
gi|423188710|ref|ZP_17175320.1| protein recA [Brucella abortus bv. 1 str. NI259]
gi|54039031|sp|P65976.1|RECA_BRUSU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|54041791|sp|P65975.1|RECA_BRUME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|68067733|sp|Q04761.2|RECA_BRUAB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123768490|sp|Q2YRU7.1|RECA_BRUA2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|189039591|sp|A9M5L8.1|RECA_BRUC2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238689380|sp|B2S648.1|RECA_BRUA1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790424|sp|C0RJG9.1|RECA_BRUMB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|23348037|gb|AAN30121.1| recA protein [Brucella suis 1330]
gi|62196245|gb|AAX74545.1| RecA, recA protein [Brucella abortus bv. 1 str. 9-941]
gi|82616137|emb|CAJ11180.1| RecA bacterial DNA recombination protein:ATP/GTP-binding site motif
A (P-loop):AAA ATPase [Brucella melitensis biovar
Abortus 2308]
gi|161335968|gb|ABX62273.1| recA protein [Brucella canis ATCC 23365]
gi|189019923|gb|ACD72645.1| RecA bacterial DNA recombination protein [Brucella abortus S19]
gi|225641063|gb|ACO00977.1| recA protein [Brucella melitensis ATCC 23457]
gi|260095712|gb|EEW79589.1| recombinase A [Brucella abortus NCTC 8038]
gi|260151613|gb|EEW86707.1| recombinase A [Brucella melitensis bv. 1 str. 16M]
gi|260155786|gb|EEW90866.1| recombinase A [Brucella suis bv. 4 str. 40]
gi|260675054|gb|EEX61875.1| recombinase A [Brucella abortus bv. 6 str. 870]
gi|260915805|gb|EEX82666.1| recombinase A [Brucella abortus bv. 3 str. Tulya]
gi|260924639|gb|EEX91207.1| recombinase A [Brucella ceti M13/05/1]
gi|261294735|gb|EEX98231.1| recombinase A [Brucella ceti M644/93/1]
gi|261297059|gb|EEY00556.1| recombinase A [Brucella pinnipedialis B2/94]
gi|261303102|gb|EEY06599.1| recombinase [Brucella pinnipedialis M163/99/10]
gi|261738377|gb|EEY26373.1| recombinase A [Brucella sp. F5/99]
gi|261742263|gb|EEY30189.1| recombinase A [Brucella suis bv. 5 str. 513]
gi|261744922|gb|EEY32848.1| recombinase A [Brucella suis bv. 3 str. 686]
gi|263093939|gb|EEZ17873.1| recombinase A [Brucella melitensis bv. 2 str. 63/9]
gi|264662852|gb|EEZ33113.1| recombinase A [Brucella sp. 83/13]
gi|306275546|gb|EFM57278.1| recA protein [Brucella inopinata BO1]
gi|306406935|gb|EFM63156.1| recA protein [Brucella sp. NF 2653]
gi|340559279|gb|AEK54517.1| recombinase A [Brucella pinnipedialis B2/94]
gi|343383047|gb|AEM18539.1| recombinase A [Brucella suis 1330]
gi|358258472|gb|AEU06207.1| recombinase A [Brucella suis VBI22]
gi|374539501|gb|EHR11005.1| protein recA [Brucella abortus bv. 1 str. NI474]
gi|374542934|gb|EHR14418.1| protein recA [Brucella abortus bv. 1 str. NI435a]
gi|374543550|gb|EHR15032.1| protein recA [Brucella abortus bv. 1 str. NI486]
gi|374545551|gb|EHR17012.1| protein recA [Brucella abortus bv. 1 str. NI488]
gi|374548917|gb|EHR20364.1| protein recA [Brucella abortus bv. 1 str. NI010]
gi|374549548|gb|EHR20991.1| protein recA [Brucella abortus bv. 1 str. NI016]
gi|374558368|gb|EHR29761.1| protein recA [Brucella abortus bv. 1 str. NI259]
gi|374559666|gb|EHR31051.1| protein recA [Brucella abortus bv. 1 str. NI021]
Length = 361
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>gi|418937705|ref|ZP_13491312.1| Protein recA [Rhizobium sp. PDO1-076]
gi|375055572|gb|EHS51813.1| Protein recA [Rhizobium sp. PDO1-076]
Length = 361
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 192 SISKSKTMVIFINQIRM 208
>gi|350564305|ref|ZP_08933123.1| recA protein [Thioalkalimicrobium aerophilum AL3]
gi|349777783|gb|EGZ32145.1| recA protein [Thioalkalimicrobium aerophilum AL3]
Length = 347
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGR++EI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRMGDSTASRDIEAISTGSLGLDIALGIGGLPKGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I EAQK GG A++D E+ALDPS AE +G+D +NLL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAIAEAQKKGGVAAFVDAEHALDPSYAEKLGVDVDNLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
++TL+IF+NQ+++
Sbjct: 185 TNTLVIFINQIRM 197
>gi|330993236|ref|ZP_08317172.1| Protein recA [Gluconacetobacter sp. SXCC-1]
gi|329759638|gb|EGG76146.1| Protein recA [Gluconacetobacter sp. SXCC-1]
Length = 348
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + S + VISTGSL LD+ALGIGGLP+GRIV
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-SEQVDVISTGSLGLDIALGIGGLPRGRIV 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IFLNQ+++
Sbjct: 186 SRSNTMLIFLNQIRL 200
>gi|421604191|ref|ZP_16046428.1| recombinase A, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404263701|gb|EJZ29144.1| recombinase A, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 285
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 181 NKSNTMVIFINQIRM 195
>gi|354952162|emb|CCE46008.1| RecA protein, partial [Brucella sp. 152]
Length = 329
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 7 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 66
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 67 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 126
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 127 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 186
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 187 SRSNCMVIFINQIRM 201
>gi|90818668|emb|CAJ32639.1| recombinase A [Ochrobactrum tritici]
Length = 355
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 142/200 (71%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 69 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 129 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 188
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 189 LTASISRSNCMVIFINQIRM 208
>gi|295810384|emb|CBL81076.1| recombinase A [Agrobacterium larrymoorei]
Length = 316
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 138/193 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVKV 258
S T++IF+NQ+++
Sbjct: 181 SKTMVIFINQIRM 193
>gi|283481769|emb|CBA10139.1| recombinase A [Agrobacterium larrymoorei]
Length = 323
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 3 VDKSKALEAALSQIERSFGKGSIMKLGSNENVIEVETVSTGSLSLDIALGIGGLPKGRII 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 63 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 123 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 182
Query: 244 CQSHTLIIFLNQVKV 258
+S T++IF+NQ+++
Sbjct: 183 SKSKTMVIFINQIRM 197
>gi|227822194|ref|YP_002826165.1| recombinase A [Sinorhizobium fredii NGR234]
gi|254790442|sp|C3MD93.1|RECA_RHISN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|227341194|gb|ACP25412.1| RecA protein [Sinorhizobium fredii NGR234]
Length = 361
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 144/201 (71%), Gaps = 8/201 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS+ + +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSKDSVIEIETVSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRI+EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+ ++IF+NQ+++
Sbjct: 188 KLTASISKSNCMVIFINQIRM 208
>gi|256369626|ref|YP_003107136.1| recombinase A [Brucella microti CCM 4915]
gi|255999788|gb|ACU48187.1| recombinase A [Brucella microti CCM 4915]
Length = 361
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>gi|242059571|ref|XP_002458931.1| hypothetical protein SORBIDRAFT_03g042890 [Sorghum bicolor]
gi|241930906|gb|EES04051.1| hypothetical protein SORBIDRAFT_03g042890 [Sorghum bicolor]
Length = 427
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 153/199 (76%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LD+ALG GGLPK
Sbjct: 58 EENMSKKDLALHQAIDQITSAFGKGAIMWLGRSQGHRDVPVVSTGSFALDMALGTGGLPK 117
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR++E+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE +G+D NLL++Q
Sbjct: 118 GRVIEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAEKIGVDTNNLLLSQ 177
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD AE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 178 PDCAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRKL 237
Query: 240 HYSLCQSHTLIIFLNQVKV 258
+SL S T+++F+NQ++
Sbjct: 238 SHSLSLSQTILLFINQIRA 256
>gi|297248509|ref|ZP_06932227.1| recombinase A [Brucella abortus bv. 5 str. B3196]
gi|17982728|gb|AAL51968.1| reca protein [Brucella melitensis bv. 1 str. 16M]
gi|297175678|gb|EFH35025.1| recombinase A [Brucella abortus bv. 5 str. B3196]
Length = 378
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 31 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 90
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 91 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 150
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 151 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 210
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 211 SRSNCMVIFINQIRM 225
>gi|374291978|ref|YP_005039013.1| Recombinase A (recA) [Azospirillum lipoferum 4B]
gi|384872617|sp|P62209.2|RECA_AZOL4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|357423917|emb|CBS86779.1| Recombinase A (recA) [Azospirillum lipoferum 4B]
Length = 359
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L VISTGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVISTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ L+IF+NQ+++
Sbjct: 194 SKSNCLVIFINQIRL 208
>gi|424895240|ref|ZP_18318814.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393179467|gb|EJC79506.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 362
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|118767321|gb|ABL11496.1| RecA [Rhizobium sp. PEPSM14]
Length = 201
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 140/196 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 6 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 65
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 66 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 125
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 126 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 185
Query: 242 SLCQSHTLIIFLNQVK 257
S+ +S+T++IF+NQV+
Sbjct: 186 SISKSNTMVIFINQVR 201
>gi|334353267|emb|CBZ39225.1| recombinase A [Brucella sp. F60]
gi|334353269|emb|CBZ39226.1| recombinase A [Brucella sp. F965]
Length = 328
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 4 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 64 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 124 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 183
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 184 SRSNCMVIFINQIRM 198
>gi|92117166|ref|YP_576895.1| recombinase A [Nitrobacter hamburgensis X14]
gi|123083700|sp|Q1QMW2.1|RECA_NITHX RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|91800060|gb|ABE62435.1| RecA protein [Nitrobacter hamburgensis X14]
Length = 362
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+ ++LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPIYARKLGVKVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|114328048|ref|YP_745205.1| recombinase A [Granulibacter bethesdensis CGDNIH1]
gi|84620800|gb|ABC59514.1| RecA [Granulibacter bethesdensis CGDNIH1]
gi|114316222|gb|ABI62282.1| recA protein [Granulibacter bethesdensis CGDNIH1]
Length = 351
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 145/195 (74%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K+ AL AL+Q+ FGK S++ + + + VI +GSL LDLALGIGG+P+GRIV
Sbjct: 7 MEKNKALDAALAQIERSFGKGSIMRMGARNVAEQIEVIPSGSLGLDLALGIGGMPRGRIV 66
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 67 EIYGPESSGKTTLALHTVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDAG 126
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 127 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSV 186
Query: 244 CQSHTLIIFLNQVKV 258
+S+T +IFLNQ+++
Sbjct: 187 NRSNTTLIFLNQIRM 201
>gi|89473563|emb|CAJ34594.1| recombinase A [Brucella abortus]
gi|89473565|emb|CAJ34595.1| recombinase A [Brucella canis]
gi|89473567|emb|CAJ34596.1| recombinase A [Brucella neotomae]
gi|89473569|emb|CAJ34597.1| recombinase A [Brucella ovis]
gi|89473571|emb|CAJ34598.1| recombinase A [Brucella suis 1330]
gi|89473573|emb|CAJ34599.1| recombinase A [Brucella pinnipedialis]
gi|89473575|emb|CAJ34600.1| recombinase A [Brucella ceti]
gi|90818664|emb|CAJ32637.1| recombinase A [Brucella melitensis]
Length = 355
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>gi|404319018|ref|ZP_10966951.1| recombinase A [Ochrobactrum anthropi CTS-325]
Length = 361
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 142/200 (71%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 69 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 129 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 188
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 189 LTASISRSNCMVIFINQIRM 208
>gi|209549552|ref|YP_002281469.1| recombinase A [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|402487937|ref|ZP_10834752.1| recombinase A [Rhizobium sp. CCGE 510]
gi|424913756|ref|ZP_18337120.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM597]
gi|226723636|sp|B5ZRG2.1|RECA_RHILW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|209535308|gb|ACI55243.1| recA protein [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|363399254|gb|AEW16333.1| recombination protein A [Rhizobium sp. CCGE 510]
gi|392849932|gb|EJB02453.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM597]
gi|401813105|gb|EJT05452.1| recombinase A [Rhizobium sp. CCGE 510]
Length = 362
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|374087442|gb|AEY82524.1| RecA [Rhizobium sp. LPU83]
Length = 361
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNESVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 192 SISKSKTMVIFINQIRM 208
>gi|424887837|ref|ZP_18311440.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393173386|gb|EJC73430.1| protein RecA [Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 362
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|109254800|emb|CAK22262.1| recombinase A [Pseudochrobactrum kiredjianiae]
Length = 299
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 138/186 (74%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERSFGKGSIMRLGQNDKVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTT+ALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTMALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNTMVIF 182
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 183 INQIRM 188
>gi|90420927|ref|ZP_01228832.1| RecA [Aurantimonas manganoxydans SI85-9A1]
gi|90334902|gb|EAS48674.1| RecA [Aurantimonas manganoxydans SI85-9A1]
Length = 357
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K+ AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR+V
Sbjct: 14 LDKNKALDAALSQIERAFGKGSIMRLGENEKIVEIETVSTGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EVYGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S ++IF+NQ+++
Sbjct: 194 SRSKCMVIFINQIRM 208
>gi|153009316|ref|YP_001370531.1| recombinase A [Ochrobactrum anthropi ATCC 49188]
gi|166220662|sp|A6X0E8.1|RECA_OCHA4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|151561204|gb|ABS14702.1| recA protein [Ochrobactrum anthropi ATCC 49188]
Length = 361
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 142/200 (71%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 69 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 129 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 188
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 189 LTASISRSNCMVIFINQIRM 208
>gi|195638478|gb|ACG38707.1| DNA repair protein recA [Zea mays]
Length = 430
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 154/199 (77%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LD+ALG GGLP
Sbjct: 60 DEESMSKKDLALHQAIDQITSAFGKGAIMWLGRSQGLRDVPVVSTGSFALDMALGTGGLP 119
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR++E+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE++ +D NLL++
Sbjct: 120 KGRVIEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESIXVDTNNLLVS 179
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD AE LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK
Sbjct: 180 QPDCAEQALSLVDTLIRSGSVDVVVVDSVAALVPKTELDGEMGDAHVALQARLMSQALRK 239
Query: 239 IHYSLCQSHTLIIFLNQVK 257
+ +SL S T+++F+NQ++
Sbjct: 240 LSHSLSLSQTVLLFINQIR 258
>gi|443497939|dbj|BAM76762.1| recombinase A, partial [Ochrobactrum anthropi]
Length = 340
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 142/200 (71%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 6 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 60
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 61 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 120
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 121 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 180
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 181 LTASISRSNCMVIFINQIRM 200
>gi|209964227|ref|YP_002297142.1| recombinase A [Rhodospirillum centenum SW]
gi|226723637|sp|B6IS93.1|RECA_RHOCS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|209957693|gb|ACI98329.1| RecA protein [Rhodospirillum centenum SW]
Length = 358
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L ISTGSL LD+ALGIGGLP+GRIV
Sbjct: 13 MDKQKALDAALGQIERAFGKGSIMKLGAREAMAETEAISTGSLGLDIALGIGGLPRGRIV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP+ A +G+D + LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLALHAIAEAQKAGGTCAFVDAEHALDPAYARKLGVDVDELLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 192
Query: 244 CQSHTLIIFLNQVKV 258
+S L+IF+NQ+++
Sbjct: 193 SKSRCLVIFINQIRL 207
>gi|83594151|ref|YP_427903.1| recombinase A [Rhodospirillum rubrum ATCC 11170]
gi|386350903|ref|YP_006049151.1| recombinase A [Rhodospirillum rubrum F11]
gi|123766962|sp|Q2RQH9.1|RECA_RHORT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|83577065|gb|ABC23616.1| RecA protein [Rhodospirillum rubrum ATCC 11170]
gi|346719339|gb|AEO49354.1| recombinase A [Rhodospirillum rubrum F11]
Length = 366
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 146/204 (71%), Gaps = 10/204 (4%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV-----ISTGSLKLDLALGI 114
D M K AL A+ Q+ FGK S++ L +RG V ISTGSL LD+ALGI
Sbjct: 10 DKDTMDKQKALEAAVGQIERAFGKGSIMKL-----GQRGSVVDIESISTGSLGLDIALGI 64
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLP+GRIVEIYG E+SGKTTLALHV+ EAQK GG CA++D E+A DP A +G+ ++
Sbjct: 65 GGLPRGRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDD 124
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD+ E L + DTL +SG+IDV+V+DSVAAL+PK E+ + + Q+R+M+Q
Sbjct: 125 LLVSQPDTGEQALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQ 184
Query: 235 ALRKIHYSLCQSHTLIIFLNQVKV 258
ALRK+ ++ +S+TLIIF+NQ+++
Sbjct: 185 ALRKLTGTVSRSNTLIIFINQIRM 208
>gi|398353909|ref|YP_006399373.1| protein RecA [Sinorhizobium fredii USDA 257]
gi|390129235|gb|AFL52616.1| protein RecA [Sinorhizobium fredii USDA 257]
Length = 361
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 144/201 (71%), Gaps = 8/201 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS+ V +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSKDSVVEIETVSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGR++EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRVIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+ ++IF+NQ+++
Sbjct: 188 KLTASISKSNCMVIFINQIRM 208
>gi|357029345|ref|ZP_09091343.1| recombinase A [Mesorhizobium amorphae CCNWGS0123]
gi|355535264|gb|EHH04553.1| recombinase A [Mesorhizobium amorphae CCNWGS0123]
Length = 353
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GRIV
Sbjct: 1 MDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 181 SRSNTMVIFINQIRM 195
>gi|89143137|emb|CAJ41870.1| recombinase A [Pseudochrobactrum asaccharolyticum]
Length = 302
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 139/190 (73%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + + TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 2 ALDAALSQIERSFGKGSIMRLGQNDKVVEIETVPTGSLSLDIALGVGGLPKGRIVEIYGP 61
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 62 ESSGKTTMALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALE 121
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T
Sbjct: 122 ITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNT 181
Query: 249 LIIFLNQVKV 258
++IF+NQ+++
Sbjct: 182 MVIFINQIRM 191
>gi|89143139|emb|CAJ41871.1| recombinase A [Pseudochrobactrum saccharolyticum]
Length = 302
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 139/190 (73%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + + TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 2 ALDAALSQIERSFGKGSIMRLGQNDKVVEIETVPTGSLSLDIALGVGGLPKGRIVEIYGP 61
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 62 ESSGKTTMALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALE 121
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T
Sbjct: 122 ITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNT 181
Query: 249 LIIFLNQVKV 258
++IF+NQ+++
Sbjct: 182 MVIFINQIRM 191
>gi|132237|sp|P27865.1|RECA_RHIME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|581521|emb|CAA42580.1| RecA protein [Sinorhizobium meliloti]
Length = 348
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 SKSNCMVIFINQIRM 195
>gi|121602844|ref|YP_989026.1| recombinase A [Bartonella bacilliformis KC583]
gi|421760829|ref|ZP_16197643.1| recombinase A [Bartonella bacilliformis INS]
gi|166199600|sp|A1USS3.1|RECA_BARBK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|120615021|gb|ABM45622.1| protein RecA [Bartonella bacilliformis KC583]
gi|411174597|gb|EKS44629.1| recombinase A [Bartonella bacilliformis INS]
Length = 347
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + G ISTGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKKKALDAALSQIERSFGKGSIMRLGQKEGVVEIETISTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL ++QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLENLFVSQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI ++ Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|190892009|ref|YP_001978551.1| recombinase A [Rhizobium etli CIAT 652]
gi|417105487|ref|ZP_11961728.1| recombinase A protein [Rhizobium etli CNPAF512]
gi|238692491|sp|B3PPU4.1|RECA_RHIE6 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|190697288|gb|ACE91373.1| recombinase A protein [Rhizobium etli CIAT 652]
gi|327190520|gb|EGE57614.1| recombinase A protein [Rhizobium etli CNPAF512]
Length = 362
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|110633616|ref|YP_673824.1| recombinase A [Chelativorans sp. BNC1]
gi|123058023|sp|Q11IW6.1|RECA_MESSB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|110284600|gb|ABG62659.1| RecA protein [Chelativorans sp. BNC1]
Length = 360
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 14 VDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 SRSNTMVIFINQIRM 208
>gi|62288901|sp|Q9XBC1.3|RECA_RHOPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
Length = 349
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 61 EIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 181 NKSNTMVIFINQIRM 195
>gi|399042548|ref|ZP_10737258.1| protein RecA [Rhizobium sp. CF122]
gi|398058991|gb|EJL50859.1| protein RecA [Rhizobium sp. CF122]
Length = 362
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|5103048|dbj|BAA78779.1| RecA protein [Rhodopseudomonas palustris]
Length = 363
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 15 MDKSKALSAALSQIERQFGKGSVMKLGKNDRAMEIETISSGSLGLDIALGVGGLPKGRIV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 195 NKSNTMVIFINQIRM 209
>gi|1172888|sp|P24543.2|RECA_RHIET RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|683661|emb|CAA44346.1| RecA [Rhizobium phaseoli]
Length = 361
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|189485625|ref|YP_001956566.1| recombinase A [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287584|dbj|BAG14105.1| recombinase A [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 354
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 142/193 (73%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL LALSQ+ DFGKE+++ L R I TG+L LD+A+GIGG+P+GRI+E
Sbjct: 5 EKLKALDLALSQIEKDFGKEAIMRLGEKHSKERVDSIPTGALPLDIAIGIGGIPRGRIIE 64
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLAL ++ EAQKLGG AY+D E+A+DP A+ +G+D NLLI+QPDS E
Sbjct: 65 IYGPESSGKTTLALCMVAEAQKLGGIAAYIDAEHAMDPEYAQKLGVDINNLLISQPDSGE 124
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++
Sbjct: 125 QGLEIADKLIRSGAVDIIVVDSVAALVPKAEIEGEMGDSFVGLQARLMSQALRKLTSNIS 184
Query: 245 QSHTLIIFLNQVK 257
+S T I+F+NQ++
Sbjct: 185 KSKTSIVFINQLR 197
>gi|150396733|ref|YP_001327200.1| recombinase A [Sinorhizobium medicae WSM419]
gi|166220683|sp|A6U9N5.1|RECA_SINMW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|150028248|gb|ABR60365.1| recA protein [Sinorhizobium medicae WSM419]
Length = 361
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERAFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+ ++IF+NQ+++
Sbjct: 192 SISKSNCMVIFINQIRM 208
>gi|407782762|ref|ZP_11129971.1| recombinase A [Oceanibaculum indicum P24]
gi|407205058|gb|EKE75035.1| recombinase A [Oceanibaculum indicum P24]
Length = 360
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L + + ISTGSL LD+ALGIGGLP+GRI+
Sbjct: 14 MDKQKALDAALGQIERAFGKGSIMKLGQRDSAVEIEAISTGSLGLDIALGIGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK+GG CA++D E+ALDP+ A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAVAEAQKVGGTCAFVDAEHALDPTYARKLGVNVDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S ++IF+NQ+++
Sbjct: 194 SKSRCMVIFINQIRM 208
>gi|409437565|ref|ZP_11264674.1| Recombinase A (recA) [Rhizobium mesoamericanum STM3625]
gi|358029543|emb|CCA94648.1| recombinase A [Rhizobium sp. STM 3625]
gi|408750601|emb|CCM75832.1| Recombinase A (recA) [Rhizobium mesoamericanum STM3625]
Length = 362
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|316932870|ref|YP_004107852.1| recA protein [Rhodopseudomonas palustris DX-1]
gi|315600584|gb|ADU43119.1| recA protein [Rhodopseudomonas palustris DX-1]
Length = 363
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 15 MDKSKALSAALSQIERQFGKGSVMKLGKNDRAMEIETISSGSLGLDIALGVGGLPKGRIV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 195 NKSNTMVIFINQIRM 209
>gi|39936912|ref|NP_949188.1| recombinase A [Rhodopseudomonas palustris CGA009]
gi|192292742|ref|YP_001993347.1| recombinase A [Rhodopseudomonas palustris TIE-1]
gi|39650769|emb|CAE29292.1| recombination protein recA [Rhodopseudomonas palustris CGA009]
gi|192286491|gb|ACF02872.1| recA protein [Rhodopseudomonas palustris TIE-1]
Length = 363
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 15 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 195 NKSNTMVIFINQIRM 209
>gi|226939722|ref|YP_002794795.1| recombinase A [Laribacter hongkongensis HLHK9]
gi|254790435|sp|C1D4J2.1|RECA_LARHH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226714648|gb|ACO73786.1| RecA [Laribacter hongkongensis HLHK9]
Length = 354
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + + VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 6 KQKALSAALSQIEKQFGKGSIMRMNETQVNDNLQVISTGSLGLDMALGVGGLPRGRVVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L V+ EAQKLGG CAY+D ENALDP A +G+ ++LL++QPD+ E
Sbjct: 66 YGPESSGKTTLCLQVVAEAQKLGGTCAYIDAENALDPVYAGKLGVKVDDLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 126 ALEICDMLVRSGGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKR 185
Query: 246 SHTLIIFLNQVKV 258
++TL+IF+NQ+++
Sbjct: 186 TNTLVIFINQIRM 198
>gi|42569151|ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA repair protein recA homolog 3, mitochondrial;
AltName: Full=Recombinase A homolog 3; Flags: Precursor
gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis thaliana]
gi|330251794|gb|AEC06888.1| DNA repair protein recA-like 3 [Arabidopsis thaliana]
Length = 430
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 152/204 (74%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +K+ AL+ AL Q+ + FGK S++ L R R PV STGS LD+ALG
Sbjct: 46 DGNGSSEEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALG 105
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
+GGLPKGR+VEIYG EASGKTTLALHVI EAQK GG C ++D E+ALD SLA+A+G++ E
Sbjct: 106 VGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTE 165
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGS+DVIVVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 166 NLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMS 225
Query: 234 QALRKIHYSLCQSHTLIIFLNQVK 257
QALRK+ +SL S TL+IF+NQV+
Sbjct: 226 QALRKLSHSLSLSQTLLIFINQVR 249
>gi|158424479|ref|YP_001525771.1| recombinase A [Azorhizobium caulinodans ORS 571]
gi|158331368|dbj|BAF88853.1| RecA protein [Azorhizobium caulinodans ORS 571]
Length = 363
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + IS+GSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKTKALDAALSQIERHFGKGSIMRLGKSGKVMEVESISSGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDNQPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 SKSNTMVIFINQIRM 208
>gi|207366250|emb|CAQ58020.1| recombinase A [Agrobacterium tumefaciens]
gi|207366252|emb|CAQ58021.1| recombinase A [Agrobacterium tumefaciens]
gi|207366254|emb|CAQ58022.1| recombinase A [Agrobacterium tumefaciens]
gi|207366256|emb|CAQ58023.1| recombinase A [Agrobacterium tumefaciens]
gi|207366258|emb|CAQ58024.1| recombinase A [Agrobacterium tumefaciens]
gi|207366260|emb|CAQ58025.1| recombinase A [Agrobacterium tumefaciens]
gi|207366262|emb|CAQ58026.1| recombinase A [Agrobacterium tumefaciens]
gi|207366264|emb|CAQ58027.1| recombinase A [Agrobacterium tumefaciens]
gi|207366266|emb|CAQ58028.1| recombinase A [Agrobacterium tumefaciens]
gi|207366268|emb|CAQ58029.1| recombinase A [Agrobacterium tumefaciens]
gi|207366270|emb|CAQ58030.1| recombinase A [Agrobacterium tumefaciens]
gi|207366272|emb|CAQ58031.1| recombinase A [Agrobacterium tumefaciens]
gi|207366274|emb|CAQ58032.1| recombinase A [Agrobacterium tumefaciens]
gi|207366276|emb|CAQ58033.1| recombinase A [Agrobacterium tumefaciens]
gi|444436478|gb|AGE09607.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436480|gb|AGE09608.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436482|gb|AGE09609.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436484|gb|AGE09610.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436486|gb|AGE09611.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436488|gb|AGE09612.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436490|gb|AGE09613.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436492|gb|AGE09614.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436494|gb|AGE09615.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436496|gb|AGE09616.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436498|gb|AGE09617.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436500|gb|AGE09618.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436502|gb|AGE09619.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436504|gb|AGE09620.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436506|gb|AGE09621.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436508|gb|AGE09622.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436510|gb|AGE09623.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436512|gb|AGE09624.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436514|gb|AGE09625.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436516|gb|AGE09626.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436518|gb|AGE09627.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436520|gb|AGE09628.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436522|gb|AGE09629.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436524|gb|AGE09630.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436526|gb|AGE09631.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436528|gb|AGE09632.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436530|gb|AGE09633.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436532|gb|AGE09634.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436534|gb|AGE09635.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436536|gb|AGE09636.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436538|gb|AGE09637.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436540|gb|AGE09638.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436542|gb|AGE09639.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436544|gb|AGE09640.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436546|gb|AGE09641.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436548|gb|AGE09642.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436550|gb|AGE09643.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436552|gb|AGE09644.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436554|gb|AGE09645.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436556|gb|AGE09646.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436560|gb|AGE09648.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436562|gb|AGE09649.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|115441659|ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group]
gi|56784510|dbj|BAD82767.1| putative recA protein [Oryza sativa Japonica Group]
gi|56784869|dbj|BAD82109.1| putative recA protein [Oryza sativa Japonica Group]
gi|113534640|dbj|BAF07023.1| Os01g0901200 [Oryza sativa Japonica Group]
gi|222619696|gb|EEE55828.1| hypothetical protein OsJ_04434 [Oryza sativa Japonica Group]
Length = 429
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/198 (56%), Positives = 153/198 (77%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ + +KD AL A+ Q+ + FGK +++ L R G R PV+STGS LDLALG GGLPK
Sbjct: 59 EENLSKKDLALHQAIDQITSAFGKGAIMWLGRSEGRREVPVVSTGSFSLDLALGTGGLPK 118
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR++E+YG EASGKTTLALHVI EAQK GGYCA++D E+ALDP+LAE++G++ NLL++Q
Sbjct: 119 GRVIEVYGPEASGKTTLALHVIAEAQKHGGYCAFVDAEHALDPALAESIGVNTSNLLLSQ 178
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD E LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQARLMSQALRKL 238
Query: 240 HYSLCQSHTLIIFLNQVK 257
+SL S T+++F+NQ++
Sbjct: 239 SHSLSLSQTILLFINQIR 256
>gi|86750850|ref|YP_487346.1| recombinase A [Rhodopseudomonas palustris HaA2]
gi|86573878|gb|ABD08435.1| RecA protein [Rhodopseudomonas palustris HaA2]
Length = 364
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGR+V
Sbjct: 16 MDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVV 75
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 76 EIYGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 135
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 136 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGDMGDALPGLQARLMSQALRKLTASI 195
Query: 244 CQSHTLIIFLNQVKV 258
+SHT++IF+NQ+++
Sbjct: 196 NKSHTMVIFINQIRM 210
>gi|444436558|gb|AGE09647.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|418403219|ref|ZP_12976714.1| recombinase A [Sinorhizobium meliloti CCNWSX0020]
gi|359502831|gb|EHK75398.1| recombinase A [Sinorhizobium meliloti CCNWSX0020]
Length = 361
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+ ++IF+NQ+++
Sbjct: 192 SISKSNCMVIFINQIRM 208
>gi|90818658|emb|CAJ32634.1| recombinase A [Ochrobactrum anthropi]
Length = 355
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 143/206 (69%), Gaps = 10/206 (4%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLAL 112
H + + K AL ALSQ+ FGK S++ L + PVI TGSL LD+AL
Sbjct: 8 HVEENSVDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIAL 62
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D
Sbjct: 63 GVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDL 122
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
ENLLI+QPD+ E L + D L +SG+IDV+VVDSVAAL P+ EI + Q+R+M
Sbjct: 123 ENLLISQPDTGEQALEITDALVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLM 182
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 183 SQALRKLTASISRSNCMVIFINQIRM 208
>gi|325293276|ref|YP_004279140.1| recombinase A [Agrobacterium sp. H13-3]
gi|418408608|ref|ZP_12981924.1| recombinase A [Agrobacterium tumefaciens 5A]
gi|325061129|gb|ADY64820.1| recombinase A [Agrobacterium sp. H13-3]
gi|358005522|gb|EHJ97848.1| recombinase A [Agrobacterium tumefaciens 5A]
gi|444299298|emb|CCP29598.1| recombinase A [Agrobacterium genomosp. 1]
Length = 363
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 192 SISKSKCMVIFINQIRM 208
>gi|414145292|gb|AFW98596.1| recombinase A, partial [Bradyrhizobium sp. SEMIA 5060]
Length = 199
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 139/191 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 9 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 68
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 69 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 128
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 129 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 188
Query: 244 CQSHTLIIFLN 254
+SHT++IF+N
Sbjct: 189 NKSHTMVIFIN 199
>gi|222148885|ref|YP_002549842.1| recombinase A [Agrobacterium vitis S4]
gi|254790418|sp|B9JX56.1|RECA_AGRVS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|221735871|gb|ACM36834.1| RecA protein [Agrobacterium vitis S4]
Length = 362
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KTVDKSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTG 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+ +++F+NQ+++
Sbjct: 192 SISRSNCMVVFINQIRM 208
>gi|381167306|ref|ZP_09876514.1| Recombinase A (recA) [Phaeospirillum molischianum DSM 120]
gi|380683614|emb|CCG41326.1| Recombinase A (recA) [Phaeospirillum molischianum DSM 120]
Length = 359
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 144/199 (72%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ L + VISTGSL LD+ALGIGG+P+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGQKDQVVETEVISTGSLGLDVALGIGGVPR 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLALH+I EAQK GG CA++D E+ALDP A +G+ + LLI+Q
Sbjct: 70 GRIIEVYGPESSGKTTLALHIIAEAQKKGGACAFIDAEHALDPGYARKLGVVLDELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L +VDTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 130 PDAGEQALEIVDTLVRSGAIDVLVVDSVAALVPRAELEGEMGDAHVGLHARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 190 TGSVSKSKTIVIFINQIRM 208
>gi|349686592|ref|ZP_08897734.1| DNA recombinase RecA [Gluconacetobacter oboediens 174Bp2]
Length = 348
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + + + VISTGSL LD+ALGIGGLP+GRI+
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-TEQVDVISTGSLGLDIALGIGGLPRGRII 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IFLNQ+++
Sbjct: 186 SRSNTMLIFLNQIRL 200
>gi|421852716|ref|ZP_16285401.1| DNA recombinase RecA [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
gi|371479047|dbj|GAB30604.1| DNA recombinase RecA [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
Length = 344
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 144/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G R VI TGSL LD+ALGIGGLP+G
Sbjct: 4 MDKAKALEGALGQIERAFGKGSVMRL----GQRPKVEADVIPTGSLGLDIALGIGGLPRG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R+VEIYG E+SGKTTLALH I EAQK G CA++D E+ALDPS A+ +G+D +NLLI+QP
Sbjct: 60 RVVEIYGPESSGKTTLALHAIAEAQKRDGTCAFIDAEHALDPSYAKKLGVDVDNLLISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 120 DTGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL+IFLNQ+++
Sbjct: 180 GTVARSNTLMIFLNQIRL 197
>gi|452963778|gb|EME68836.1| recombinase A [Magnetospirillum sp. SO-1]
Length = 359
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 144/199 (72%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ + + VISTGSL LD+ALGIGGLP+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKMGQKDQVVETEVISTGSLGLDVALGIGGLPR 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLALHVI EAQK GG CA++D E+ALDP A +G++ + LLI+Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHVIAEAQKKGGTCAFVDAEHALDPIYARKLGVNLDELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 190 TGSVSKSKTIVIFINQIRM 208
>gi|88813101|ref|ZP_01128342.1| recA protein [Nitrococcus mobilis Nb-231]
gi|88789585|gb|EAR20711.1| recA protein [Nitrococcus mobilis Nb-231]
Length = 351
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL LAL Q+ FGK +++ + R PVISTGSL LD+ALGIGGLP+GR+VEI
Sbjct: 7 RKKALNLALGQIEKQFGKGTVMRMGDMQAVRDVPVISTGSLSLDIALGIGGLPRGRVVEI 66
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I EAQK GG A++D E+ALDP A+ +G+D LL++QPD+ E
Sbjct: 67 YGPESSGKTTLTLQTIAEAQKAGGIAAFVDAEHALDPDYAQKLGVDINELLLSQPDTGEQ 126
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 127 ALEITDMLVRSGAVDIIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 186
Query: 246 SHTLIIFLNQVKV 258
SH+L+IF+NQ+++
Sbjct: 187 SHSLVIFINQIRM 199
>gi|207366314|emb|CAQ58052.1| recombinase A [Agrobacterium tumefaciens]
gi|207366316|emb|CAQ58053.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|182679357|ref|YP_001833503.1| recA protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635240|gb|ACB96014.1| recA protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 343
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR++
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGKSQKAIEIETISTGSLGLDIALGVGGLPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLTLHVIAEAQKKGGVCAFIDAEHALDPVYARKLGVNLDDLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDNQPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S T++IF+NQ+++
Sbjct: 181 SRSQTMVIFINQIRM 195
>gi|311692249|dbj|BAJ25739.1| recombinase A [Rhizobium leguminosarum bv. viciae]
Length = 191
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 137/191 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQV 256
S+T++IF+NQ+
Sbjct: 181 SNTMVIFINQI 191
>gi|45825424|gb|AAS77561.1| RecA protein [Bradyrhizobium sp. ICMP 14755]
Length = 277
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 3 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 63 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 123 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 182
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 183 NKSNTMVIFINQIRM 197
>gi|67906614|gb|AAY82716.1| predicted recombination protein RecA [uncultured bacterium]
Length = 370
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 144/197 (73%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K+ AL A+SQ+ ++FGK S++ L G ++ I TGSL LDLALGIGG PKGR
Sbjct: 21 EKNKALDAAISQITDNFGKGSVMKL----GQKKAMDIESIFTGSLSLDLALGIGGFPKGR 76
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G++ E LLI+QPD
Sbjct: 77 IVEIYGPESSGKTTLALQVVAEAQKSGGICAFVDAEHALDPVYAKKLGVNTEELLISQPD 136
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL KSGSI VIV+DSVAAL P+ EI + + QSR+M+QALRK+
Sbjct: 137 AGEQALEIADTLVKSGSISVIVIDSVAALTPRAEIEGDMGDHHVGLQSRLMSQALRKLTS 196
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ ++T++IF+NQ+++
Sbjct: 197 SISNTNTMMIFINQIRM 213
>gi|371782151|emb|CCE46142.1| recombinase A, partial [Rhizobium undicola]
Length = 253
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ +FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERNFGKGSIMKLGANEKVVEIDTVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISR 180
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 181 SNCMVIFINQIRM 193
>gi|337269281|ref|YP_004613336.1| recA protein [Mesorhizobium opportunistum WSM2075]
gi|433775682|ref|YP_007306149.1| protein RecA [Mesorhizobium australicum WSM2073]
gi|336029591|gb|AEH89242.1| recA protein [Mesorhizobium opportunistum WSM2075]
gi|433667697|gb|AGB46773.1| protein RecA [Mesorhizobium australicum WSM2073]
Length = 366
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISRSNTMVIFINQIRM 208
>gi|374576548|ref|ZP_09649644.1| protein RecA [Bradyrhizobium sp. WSM471]
gi|386401717|ref|ZP_10086495.1| protein RecA [Bradyrhizobium sp. WSM1253]
gi|374424869|gb|EHR04402.1| protein RecA [Bradyrhizobium sp. WSM471]
gi|385742343|gb|EIG62539.1| protein RecA [Bradyrhizobium sp. WSM1253]
Length = 362
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|13470353|ref|NP_101919.1| recombinase A [Mesorhizobium loti MAFF303099]
gi|20178054|sp|Q98NQ6.1|RECA_RHILO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|14021092|dbj|BAB47705.1| recombination protein; RecA [Mesorhizobium loti MAFF303099]
Length = 365
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISRSNTMVIFINQIRM 208
>gi|319405870|emb|CBI79502.1| RecA protein [Bartonella sp. AR 15-3]
Length = 347
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKTKALESALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|195970165|ref|NP_385905.2| recombinase A [Sinorhizobium meliloti 1021]
gi|334316434|ref|YP_004549053.1| protein recA [Sinorhizobium meliloti AK83]
gi|384529619|ref|YP_005713707.1| protein recA [Sinorhizobium meliloti BL225C]
gi|384536050|ref|YP_005720135.1| recombinase A [Sinorhizobium meliloti SM11]
gi|407720741|ref|YP_006840403.1| recombinase A [Sinorhizobium meliloti Rm41]
gi|433613582|ref|YP_007190380.1| protein RecA [Sinorhizobium meliloti GR4]
gi|187904183|emb|CAC46378.2| DNA strand exchange and recombination protein [Sinorhizobium
meliloti 1021]
gi|333811795|gb|AEG04464.1| Protein recA [Sinorhizobium meliloti BL225C]
gi|334095428|gb|AEG53439.1| Protein recA [Sinorhizobium meliloti AK83]
gi|336032942|gb|AEH78874.1| recombinase A [Sinorhizobium meliloti SM11]
gi|407318973|emb|CCM67577.1| recombinase A [Sinorhizobium meliloti Rm41]
gi|429551772|gb|AGA06781.1| protein RecA [Sinorhizobium meliloti GR4]
Length = 361
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+ ++IF+NQ+++
Sbjct: 192 SISKSNCMVIFINQIRM 208
>gi|319784063|ref|YP_004143539.1| recA protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169951|gb|ADV13489.1| recA protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 365
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISRSNTMVIFINQIRM 208
>gi|319899071|ref|YP_004159164.1| recombinase A [Bartonella clarridgeiae 73]
gi|319403035|emb|CBI76590.1| RecA protein [Bartonella clarridgeiae 73]
Length = 347
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|361049809|emb|CCE21614.1| recombinase A, partial [Brucella sp. 4986/3]
Length = 348
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 1 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR++ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRELTGSI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 SRSNCMVIFINQIRM 195
>gi|45825408|gb|AAS77553.1| RecA protein [Mesorhizobium sp. ICMP 14330]
Length = 284
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 1 KSVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 181 SISRSNTMVIFINQIRM 197
>gi|4191779|gb|AAD10148.1| putative recA protein [Arabidopsis thaliana]
Length = 376
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 149/193 (77%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K+ AL+ AL Q+ + FGK S++ L R R PV STGS LD+ALG+GGLPKGR+VE
Sbjct: 3 KKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG EASGKTTLALHVI EAQK GG C ++D E+ALD SLA+A+G++ ENLL++QPD E
Sbjct: 63 IYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
LS+VDTL +SGS+DVIVVDSVAAL+PK E+ + + Q+R+M+QALRK+ +SL
Sbjct: 123 QALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLS 182
Query: 245 QSHTLIIFLNQVK 257
S TL+IF+NQV+
Sbjct: 183 LSQTLLIFINQVR 195
>gi|407976207|ref|ZP_11157108.1| recombinase A [Nitratireductor indicus C115]
gi|407428382|gb|EKF41065.1| recombinase A [Nitratireductor indicus C115]
Length = 361
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLP+GRI+
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGIGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S T++IF+NQ+++
Sbjct: 194 SRSKTMVIFINQIRM 208
>gi|339777243|gb|AEK05518.1| recombinase A [Rhizobium mongolense]
Length = 196
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 138/195 (70%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPK
Sbjct: 2 EXKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLSLDIALGIGGLPK 61
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+Q
Sbjct: 62 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 121
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 122 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 181
Query: 240 HYSLCQSHTLIIFLN 254
S+ +S+T++IF+N
Sbjct: 182 TASISKSNTMVIFIN 196
>gi|417859682|ref|ZP_12504738.1| recombinase A [Agrobacterium tumefaciens F2]
gi|338822746|gb|EGP56714.1| recombinase A [Agrobacterium tumefaciens F2]
Length = 363
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 192 SISKSKCMVIFINQIRM 208
>gi|349699591|ref|ZP_08901220.1| DNA recombinase RecA [Gluconacetobacter europaeus LMG 18494]
Length = 348
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + + + VISTGSL LD+ALGIGGLP+GRI+
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-TEQVDVISTGSLGLDIALGIGGLPRGRII 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IFLNQ+++
Sbjct: 186 SRSNTMLIFLNQIRL 200
>gi|144900462|emb|CAM77326.1| RecA bacterial DNA recombination protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 358
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 147/199 (73%), Gaps = 1/199 (0%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ + + + V+STGSL LD+ALGIGGLP+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKMGQKE-TVETEVVSTGSLGLDIALGIGGLPR 68
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLALHV+ EAQK GG CA++D E+ALDPS A +G++ ++LLI+Q
Sbjct: 69 GRIIEIYGPESSGKTTLALHVLAEAQKKGGTCAFIDAEHALDPSYARKLGVNLDDLLISQ 128
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 129 PDAGEQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKL 188
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 189 TGSVSKSKTIVIFINQIRM 207
>gi|444299276|emb|CCP29587.1| recombinase A, partial [Agrobacterium genomosp. 1]
Length = 322
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 138/195 (70%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 2 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETISTGSLSLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIFLNQVKV 258
+S ++IF+NQ+++
Sbjct: 182 SKSKCMVIFINQIRM 196
>gi|585797|sp|Q08327.1|RECA_ACEPO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|300185|gb|AAC60438.1| RecA [Gluconacetobacter polyoxogenes]
gi|391592|dbj|BAA02478.1| RecA protein [Gluconacetobacter polyoxogenes]
Length = 348
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + + + VISTGSL LD+ALGIGGLP+GRI+
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-TEQVDVISTGSLGLDIALGIGGLPRGRII 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IFLNQ+++
Sbjct: 186 SRSNTMLIFLNQIRL 200
>gi|224825851|ref|ZP_03698955.1| recA protein [Pseudogulbenkiania ferrooxidans 2002]
gi|224602075|gb|EEG08254.1| recA protein [Pseudogulbenkiania ferrooxidans 2002]
Length = 351
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 142/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEI
Sbjct: 8 KSRALAAALAQIEKQFGKGSIMRMSDNQITENLQVISTGSLGLDLALGVGGLPRGRVVEI 67
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L V+ EAQKLGG CAY+D ENALDP+ A+ +G++ E+LLI+QPD+ E
Sbjct: 68 YGPESSGKTTLCLQVVAEAQKLGGTCAYIDAENALDPTYAQKLGVNVEDLLISQPDTGEQ 127
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S +DVIVVDSVAAL+PK EI + + +R+M+QALRK+ ++ +
Sbjct: 128 ALEICDMLVRSSGVDVIVVDSVAALVPKAEIEGEMGDNHVGLHARLMSQALRKLTGNIKR 187
Query: 246 SHTLIIFLNQVKV 258
++TL+IF+NQ+++
Sbjct: 188 TNTLVIFINQIRM 200
>gi|392382934|ref|YP_005032131.1| recombinase A (recA) [Azospirillum brasilense Sp245]
gi|356877899|emb|CCC98755.1| recombinase A (recA) [Azospirillum brasilense Sp245]
Length = 359
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L + V+STGSL LD+ALGIGGLP+GRI+
Sbjct: 14 MDKQKALDAALAQIERAFGKGSIMKLGARENTVETEVVSTGSLGLDIALGIGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKGGGTCAFVDAEHALDPSYARKLGVNVDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ L+IF+NQ+++
Sbjct: 194 AKSNCLVIFINQIRL 208
>gi|91976208|ref|YP_568867.1| recombinase A [Rhodopseudomonas palustris BisB5]
gi|91682664|gb|ABE38966.1| RecA protein [Rhodopseudomonas palustris BisB5]
Length = 363
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGR+V
Sbjct: 15 MDKTKALTAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 195 NKSNTMVIFINQIRM 209
>gi|427431120|ref|ZP_18920760.1| RecA protein [Caenispirillum salinarum AK4]
gi|425877952|gb|EKV26675.1| RecA protein [Caenispirillum salinarum AK4]
Length = 362
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 145/199 (72%), Gaps = 8/199 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPK 119
M K AL A+SQ+ FGK S++ L G R + ISTGSL LDLALGIGGLPK
Sbjct: 14 MDKQKALDAAVSQIERAFGKGSIMRL----GQRETVIDVEAISTGSLGLDLALGIGGLPK 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLALHV+ EAQK GG CA++D E+ALDP A +G++ + LLI+Q
Sbjct: 70 GRIIEVYGPESSGKTTLALHVVAEAQKKGGACAFVDAEHALDPVYARKLGVNLDELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+V+DSVAAL+P+ E+ + + Q+R+M+QALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAVDVLVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 190 TGSVSRSKTMVIFINQIRM 208
>gi|45825420|gb|AAS77559.1| RecA protein [Bradyrhizobium sp. ICMP 12835]
Length = 277
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 3 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 63 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 123 EQALEICDTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 182
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 183 NKSNTMVIFINQIRM 197
>gi|71062458|gb|AAZ21461.1| recA protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 358
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 141/189 (74%), Gaps = 7/189 (3%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
A+SQ+ ++FGK S++ L G RR ISTGSL LD+ALGIGGLPKGR++E+YG E
Sbjct: 4 AMSQIIDNFGKGSVMKL----GQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPE 59
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
+SGKTTLAL V+ EAQK GG CA++D E+ALDP A+ +G+D E LLI+QPD+ E L +
Sbjct: 60 SSGKTTLALQVLAEAQKAGGICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEI 119
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
DTL KSGSI VIV+DSVAAL P+ EI + + QSR+M+QALRK+ S+ ++T+
Sbjct: 120 ADTLVKSGSISVIVIDSVAALTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTM 179
Query: 250 IIFLNQVKV 258
+IF+NQ+++
Sbjct: 180 MIFINQIRM 188
>gi|383470437|gb|AFH35542.1| RecA protein, partial [Rhizobium sp. RHM67]
Length = 192
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 138/192 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGRI+EI
Sbjct: 1 QSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVK 257
S+T++IF+NQ++
Sbjct: 181 SNTMVIFINQIR 192
>gi|319407396|emb|CBI81047.1| RecA protein [Bartonella sp. 1-1C]
Length = 347
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|148887229|emb|CAM12781.1| recombinase A [Ochrobactrum anthropi]
Length = 299
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 138/186 (74%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + S +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDHSIEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 183 INQIRM 188
>gi|288958054|ref|YP_003448395.1| recombination protein [Azospirillum sp. B510]
gi|288910362|dbj|BAI71851.1| recombination protein [Azospirillum sp. B510]
Length = 359
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L V+STGSL LD+ALGIGGLP+GRIV
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVVSTGSLGLDIALGIGGLPRGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKNGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ L+IF+NQ+++
Sbjct: 194 AKSNCLVIFINQIRL 208
>gi|239787354|emb|CAX83831.1| Protein RecA [uncultured bacterium]
Length = 353
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 142/193 (73%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL+Q+ +FGK S++ L + S ISTGSL LDLALGIGGLPKGRI+E
Sbjct: 5 EKVKALDAALAQIERNFGKGSVMRLGQKDTSMNIESISTGSLGLDLALGIGGLPKGRIIE 64
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E+SGKTTL LHVI E QK GG CA++D E+ALDPS A +G+ E L+I+QPD+ E
Sbjct: 65 IFGPESSGKTTLTLHVIAECQKKGGICAFVDAEHALDPSYARKLGVKTEELIISQPDTGE 124
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + DTL +SG++D+IV+DSVAAL+PK E+ + + Q+R+M+QALRKI S+
Sbjct: 125 QALEIADTLVRSGAVDIIVIDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKITGSIS 184
Query: 245 QSHTLIIFLNQVK 257
+++ ++IF+NQ++
Sbjct: 185 KTNCMVIFINQIR 197
>gi|224122482|ref|XP_002330492.1| predicted protein [Populus trichocarpa]
gi|222872426|gb|EEF09557.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 150/196 (76%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+KD AL+ AL Q+ + FGK S++ R + PV+STGS LD+ALG GG PKGR+VE
Sbjct: 2 KKDLALQQALDQITSQFGKGSIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVVE 61
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G EASGKTTLALHVI EAQK GGYC ++D E+ALD SLA+A+G++ ENLL++QPD E
Sbjct: 62 IFGPEASGKTTLALHVIAEAQKQGGYCVFMDAEHALDSSLAKAIGVNTENLLLSQPDCGE 121
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+ +SL
Sbjct: 122 QALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLS 181
Query: 245 QSHTLIIFLNQVKVLL 260
QS T++IF+NQV+ L
Sbjct: 182 QSQTVLIFINQVRAKL 197
>gi|311692215|dbj|BAJ25722.1| recombinase A [Rhizobium sp. I111]
gi|311692231|dbj|BAJ25730.1| recombinase A [Rhizobium sp. I321]
gi|311692233|dbj|BAJ25731.1| recombinase A [Rhizobium sp. O111]
gi|311692239|dbj|BAJ25734.1| recombinase A [Rhizobium sp. T111]
gi|311692243|dbj|BAJ25736.1| recombinase A [Rhizobium sp. T151]
gi|311692245|dbj|BAJ25737.1| recombinase A [Rhizobium sp. T211]
gi|311692247|dbj|BAJ25738.1| recombinase A [Rhizobium sp. H111]
gi|311692251|dbj|BAJ25740.1| recombinase A [Rhizobium leguminosarum bv. viciae]
Length = 191
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 137/191 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQV 256
S+T++IF+NQ+
Sbjct: 181 SNTMVIFINQI 191
>gi|78044103|ref|YP_360011.1| recA protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77996218|gb|ABB15117.1| recA protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 343
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 143/192 (74%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL L +SQ+ FGK S++ L G + VI TGSL LDLALG+GG+P+GR+VEI
Sbjct: 4 KLKALELTISQIEKQFGKGSIMRLGENTGKFQVEVIPTGSLALDLALGVGGVPRGRVVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+ +G+D ENLL++QPD+ E
Sbjct: 64 FGPESSGKTTVALHIIAEAQKMGGIAAFIDAEHALDPVYAQKLGVDIENLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + ++L +SG+IDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIAESLVRSGAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAISK 183
Query: 246 SHTLIIFLNQVK 257
S T+ IF+NQ++
Sbjct: 184 SKTVAIFINQMR 195
>gi|298292139|ref|YP_003694078.1| recA protein [Starkeya novella DSM 506]
gi|296928650|gb|ADH89459.1| recA protein [Starkeya novella DSM 506]
Length = 360
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALGIGGLP+GRIV
Sbjct: 14 MDKAKALDAALSQIERHFGKGSIMRLGKNDKIMEIETVSTGSLGLDIALGIGGLPRGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 74 EIFGPESSGKTTLALHTIAESQKKGGVCAFIDAEHALDPIYARKLGVDLDNLLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLVVDSVAALTPRAELDGEMGDNQPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S T++IF+NQ+++
Sbjct: 194 NRSQTMVIFINQIRM 208
>gi|83309721|ref|YP_419985.1| recombinase A [Magnetospirillum magneticum AMB-1]
gi|123754202|sp|Q2W9P9.1|RECA_MAGSA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|82944562|dbj|BAE49426.1| RecA protein [Magnetospirillum magneticum AMB-1]
Length = 359
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 144/199 (72%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ L V+STGSL LD+ALGIGG+P+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLALH+I EAQK GG CA++D E+ALDPS A +G++ + LLI+Q
Sbjct: 70 GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 190 TGSVSKSKTIVIFINQIRM 208
>gi|262064662|gb|ACY07565.1| recombinase A [Rhizobium sp. LCS0303]
Length = 196
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 138/194 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 3 KSVXKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 62
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 63 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 122
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 123 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 182
Query: 242 SLCQSHTLIIFLNQ 255
S+ +S+T++IF+NQ
Sbjct: 183 SISKSNTMVIFINQ 196
>gi|390451215|ref|ZP_10236794.1| recombinase A [Nitratireductor aquibiodomus RA22]
gi|389661356|gb|EIM72975.1| recombinase A [Nitratireductor aquibiodomus RA22]
Length = 361
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S T++IF+NQ+++
Sbjct: 194 SRSKTMVIFINQIRM 208
>gi|86357938|ref|YP_469830.1| recombinase A [Rhizobium etli CFN 42]
gi|123751994|sp|Q2K7T3.1|RECA_RHIEC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|86282040|gb|ABC91103.1| recombinase A protein [Rhizobium etli CFN 42]
gi|388603163|gb|AFK76186.1| recombinase A [Rhizobium etli]
Length = 362
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+ ++IF+NQ+++
Sbjct: 192 SISKSNCMVIFINQIRM 208
>gi|408785530|ref|ZP_11197275.1| recombinase A [Rhizobium lupini HPC(L)]
gi|408488678|gb|EKJ96987.1| recombinase A [Rhizobium lupini HPC(L)]
Length = 300
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 138/195 (70%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S ++IF+NQ+++
Sbjct: 181 SKSKCMVIFINQIRM 195
>gi|311692227|dbj|BAJ25728.1| recombinase A [Rhizobium sp. I313]
Length = 191
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 137/191 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQV 256
S+T+++F+NQ+
Sbjct: 181 SNTMVVFINQI 191
>gi|254502491|ref|ZP_05114642.1| protein RecA [Labrenzia alexandrii DFL-11]
gi|222438562|gb|EEE45241.1| protein RecA [Labrenzia alexandrii DFL-11]
Length = 355
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 142/200 (71%), Gaps = 11/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL ALSQ+ FGK S++ + + G V+ STGSL LD+ALGIGGLP
Sbjct: 14 MDKTKALDAALSQIERAFGKGSIMRMGQ------GQVVEVQSVSTGSLGLDIALGIGGLP 67
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+
Sbjct: 68 KGRIVEIYGPESSGKTTLALHTVAEAQKTGGICAFIDAEHALDPIYARKLGVDIDNLLIS 127
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK
Sbjct: 128 QPDAGEQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRK 187
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S ++IF+NQ+++
Sbjct: 188 LTASISKSKCMVIFINQIRM 207
>gi|407777783|ref|ZP_11125051.1| recombinase A [Nitratireductor pacificus pht-3B]
gi|407300583|gb|EKF19707.1| recombinase A [Nitratireductor pacificus pht-3B]
Length = 360
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGANDQVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTMALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGALDVIVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S T++IF+NQ+++
Sbjct: 194 SRSKTMVIFINQIRM 208
>gi|330813880|ref|YP_004358119.1| recombinase A [Candidatus Pelagibacter sp. IMCC9063]
gi|327486975|gb|AEA81380.1| RecA protein [Candidatus Pelagibacter sp. IMCC9063]
Length = 376
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 151/207 (72%), Gaps = 9/207 (4%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLA 111
+E H D K QK +L A+SQ+ ++FGK S++ L G R+ ISTGSL LD+A
Sbjct: 12 NEAHTDDKERQK--SLDAAISQIDSNFGKGSVMKL----GQRQVMDIESISTGSLSLDIA 65
Query: 112 LGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGID 171
LGIGGLPK RIVEIYG E+SGKTTLAL VI EAQK GG CA++D E+ALDPS A+ +G++
Sbjct: 66 LGIGGLPKSRIVEIYGPESSGKTTLALQVIAEAQKSGGTCAFIDAEHALDPSYAKKLGVN 125
Query: 172 AENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRI 231
+LLI+QPD+ E L + DTL +SG+I V+VVDSVAAL P+ E+ + + Q+R+
Sbjct: 126 TTDLLISQPDTGEQALEITDTLVRSGAISVLVVDSVAALTPRAELEGEMGDHHMGLQARL 185
Query: 232 MTQALRKIHYSLCQSHTLIIFLNQVKV 258
M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 186 MSQALRKLTGSISKSNTMVIFINQIRM 212
>gi|115523612|ref|YP_780523.1| recombinase A [Rhodopseudomonas palustris BisA53]
gi|115517559|gb|ABJ05543.1| RecA protein [Rhodopseudomonas palustris BisA53]
Length = 362
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S ISTGSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMRLGKNDRSMDVETISTGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPIYARKLGVNVDELLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>gi|337757325|emb|CCA61584.1| recombinase A [Agrobacterium vitis]
Length = 319
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+V+DSVAAL PK EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTGSISR 180
Query: 246 SHTLIIFLNQVKV 258
S+ +++F+NQ+++
Sbjct: 181 SNCMVVFINQIRM 193
>gi|418299453|ref|ZP_12911286.1| recombinase A [Agrobacterium tumefaciens CCNWGS0286]
gi|355534918|gb|EHH04214.1| recombinase A [Agrobacterium tumefaciens CCNWGS0286]
Length = 350
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 137/195 (70%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S ++IF+NQ+++
Sbjct: 181 SKSKCMVIFINQIRM 195
>gi|353732282|gb|AER13720.1| recombinase A, partial [Ensifer sp. AG14]
gi|353732284|gb|AER13721.1| recombinase A, partial [Ensifer sp. AG22]
Length = 194
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 138/194 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 VDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVK 257
+S+ ++IF+NQ++
Sbjct: 181 SKSNCMVIFINQIR 194
>gi|384261788|ref|YP_005416974.1| protein recA [Rhodospirillum photometricum DSM 122]
gi|378402888|emb|CCG08004.1| Protein recA [Rhodospirillum photometricum DSM 122]
Length = 372
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 142/199 (71%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M K AL A+ Q+ FGK S++ L + ISTGSL LD+ALG+GGLP+
Sbjct: 24 DKDTMDKQKALEAAVGQIERSFGKGSIMRLGQRERVVETESISTGSLGLDIALGVGGLPR 83
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVEIYG E+SGKTTLA+HVI EAQK GG CA++D E+A DP +G++ + LLI+Q
Sbjct: 84 GRIVEIYGPESSGKTTLAMHVIAEAQKKGGSCAFVDAEHAFDPLYGRKLGLNLDELLISQ 143
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+IDV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 144 PDTGEQALEIADTLVRSGAIDVLVVDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKL 203
Query: 240 HYSLCQSHTLIIFLNQVKV 258
++ +S+TLIIF+NQ+++
Sbjct: 204 TGTVSRSNTLIIFINQIRM 222
>gi|207366288|emb|CAQ58039.1| recombinase A [Agrobacterium tumefaciens]
gi|207366290|emb|CAQ58040.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|359790738|ref|ZP_09293620.1| recombinase A [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253328|gb|EHK56478.1| recombinase A [Mesorhizobium alhagi CCNWXJ12-2]
Length = 362
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALDAALSQIERAFGKGSIMRLGANEKIVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISRSNTMVIFINQIRM 208
>gi|109254803|emb|CAK22263.1| recombinase A [Ochrobactrum oryzae]
gi|148897703|emb|CAM18505.1| recombinase A [Ochrobactrum oryzae]
Length = 299
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 137/186 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKRGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 183 INQIRM 188
>gi|338738241|ref|YP_004675203.1| recombinase A [Hyphomicrobium sp. MC1]
gi|337758804|emb|CCB64629.1| recombinase A [Hyphomicrobium sp. MC1]
Length = 377
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 144/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L G+ ISTGSL LD+ALGIGGLPKG
Sbjct: 14 MDKKQALEQALAQIDKTFGKGSIMRL----GANEKLDIEAISTGSLGLDIALGIGGLPKG 69
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTTLAL VI E+QK GG CA++D E+A+DP A+ +G+ E+LLI+QP
Sbjct: 70 RIIEVYGPESSGKTTLALQVIAESQKKGGVCAFVDAEHAIDPGYAKKLGVKVEDLLISQP 129
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL PK E+ + AQ+R+M+QALRK+
Sbjct: 130 DTGEQALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGEATMGAQARLMSQALRKLT 189
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +++T++IF+NQ+++
Sbjct: 190 ASISRANTMVIFINQIRM 207
>gi|421957942|gb|AFX72848.1| recombinase A, partial [Rhizobium sp. CNU8570001]
Length = 198
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 138/196 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 3 KSVDKSKALEAALSQIERSFGKGSIMKLGGKDSIVEIETVSTGSLSLDIALGIGGLPKGR 62
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 63 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 122
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 123 TGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 182
Query: 242 SLCQSHTLIIFLNQVK 257
S+ +S+ ++IF+ Q++
Sbjct: 183 SISKSNCMVIFITQIR 198
>gi|146424893|emb|CAM12555.1| recombinase A [Ochrobactrum anthropi]
gi|146424973|emb|CAM12595.1| recombinase A [Ochrobactrum anthropi]
gi|148887245|emb|CAM12789.1| recombinase A [Ochrobactrum intermedium]
gi|148897667|emb|CAM18487.1| recombinase A [Ochrobactrum intermedium]
gi|148897669|emb|CAM18488.1| recombinase A [Ochrobactrum intermedium]
gi|148897671|emb|CAM18489.1| recombinase A [Ochrobactrum intermedium]
gi|148897673|emb|CAM18490.1| recombinase A [Ochrobactrum intermedium]
gi|148897675|emb|CAM18491.1| recombinase A [Ochrobactrum intermedium]
gi|148897677|emb|CAM18492.1| recombinase A [Ochrobactrum intermedium]
gi|148897681|emb|CAM18494.1| recombinase A [Ochrobactrum intermedium]
gi|148897683|emb|CAM18495.1| recombinase A [Ochrobactrum intermedium]
gi|148897685|emb|CAM18496.1| recombinase A [Ochrobactrum intermedium]
gi|148897687|emb|CAM18497.1| recombinase A [Ochrobactrum intermedium]
gi|148897689|emb|CAM18498.1| recombinase A [Ochrobactrum intermedium]
gi|148897691|emb|CAM18499.1| recombinase A [Ochrobactrum intermedium]
gi|148897693|emb|CAM18500.1| recombinase A [Ochrobactrum intermedium]
Length = 299
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 137/186 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 183 INQIRM 188
>gi|207366292|emb|CAQ58041.1| recombinase A [Agrobacterium tumefaciens]
gi|207366294|emb|CAQ58042.1| recombinase A [Agrobacterium tumefaciens]
gi|207366296|emb|CAQ58043.1| recombinase A [Agrobacterium tumefaciens]
gi|207366298|emb|CAQ58044.1| recombinase A [Agrobacterium tumefaciens]
gi|207366300|emb|CAQ58045.1| recombinase A [Agrobacterium tumefaciens]
gi|207366302|emb|CAQ58046.1| recombinase A [Agrobacterium tumefaciens]
gi|207366304|emb|CAQ58047.1| recombinase A [Agrobacterium tumefaciens]
gi|207366306|emb|CAQ58048.1| recombinase A [Agrobacterium tumefaciens]
gi|207366308|emb|CAQ58049.1| recombinase A [Agrobacterium tumefaciens]
gi|207366310|emb|CAQ58050.1| recombinase A [Agrobacterium tumefaciens]
gi|207366312|emb|CAQ58051.1| recombinase A [Agrobacterium tumefaciens]
gi|207366348|emb|CAQ58069.1| recombinase A [Agrobacterium tumefaciens]
gi|444436566|gb|AGE09651.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436574|gb|AGE09655.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436604|gb|AGE09670.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 138/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|294013267|ref|YP_003546727.1| recombination protein RecA [Sphingobium japonicum UT26S]
gi|390165991|ref|ZP_10218264.1| recombinase A [Sphingobium indicum B90A]
gi|292676597|dbj|BAI98115.1| recombination protein RecA [Sphingobium japonicum UT26S]
gi|389591150|gb|EIM69125.1| recombinase A [Sphingobium indicum B90A]
Length = 357
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL ALSQ+ FGK S + L GSR ISTGSL LD+ALGIGGLP+G
Sbjct: 16 MDRQKALEAALSQIDRAFGKGSAMKL----GSREKIEIEAISTGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 72 RIVEIYGPESSGKTTLALHAIAEAQKAGGIAAFVDAEHALDPGYAKKLGVDIDELIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 132 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 191
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S L+IF+NQV++
Sbjct: 192 GSISRSRCLVIFINQVRM 209
>gi|389689406|ref|ZP_10178744.1| protein RecA [Microvirga sp. WSM3557]
gi|388590317|gb|EIM30602.1| protein RecA [Microvirga sp. WSM3557]
Length = 364
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 145/197 (73%), Gaps = 8/197 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL ALSQ+ FGK S++ L G + PV +STGSL LD+ALG+GGLP+GR
Sbjct: 18 KSKALDAALSQIERAFGKGSIMRL----GKGQQPVEIETVSTGSLGLDIALGVGGLPRGR 73
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 IIEIYGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPD 133
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL PK E+ + + Q+R+M+QALRK+
Sbjct: 134 TGEQALEIADTLVRSGAVDVLVIDSVAALTPKAELDGEMGEVQPGLQARLMSQALRKLTG 193
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 194 SISRSNTMVIFINQIRM 210
>gi|114775363|ref|ZP_01450931.1| recombinase A [Mariprofundus ferrooxydans PV-1]
gi|114553474|gb|EAU55855.1| recombinase A [Mariprofundus ferrooxydans PV-1]
Length = 336
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 143/195 (73%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL ALSQ+ FGK +++ R + PV + +GSL LD ALG+GG P+GR++
Sbjct: 4 KSKALDTALSQIERQFGKGTVM---RLGDHAKVPVSVVPSGSLALDAALGVGGYPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQKLGG A++D E+ALDPS AE +G+D +NLL++QPDS
Sbjct: 61 EIYGPESSGKTTMALHAIAEAQKLGGQAAFVDAEHALDPSYAERLGVDVDNLLVSQPDSG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VD LT+SG +D+IVVDSVAAL PK E+ + + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIVDMLTRSGGVDIIVVDSVAALTPKAELEGDMGDSHMGLQARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+T+IIF+NQ+++
Sbjct: 181 ARSNTIIIFINQIRM 195
>gi|395782692|ref|ZP_10463064.1| protein recA [Bartonella rattimassiliensis 15908]
gi|395416570|gb|EJF82940.1| protein recA [Bartonella rattimassiliensis 15908]
Length = 347
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALNAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|207366318|emb|CAQ58054.1| recombinase A [Agrobacterium tumefaciens]
gi|207366320|emb|CAQ58055.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 138/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|444436564|gb|AGE09650.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436568|gb|AGE09652.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436570|gb|AGE09653.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436572|gb|AGE09654.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436576|gb|AGE09656.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436578|gb|AGE09657.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436580|gb|AGE09658.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436582|gb|AGE09659.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436584|gb|AGE09660.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436586|gb|AGE09661.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436588|gb|AGE09662.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436590|gb|AGE09663.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436592|gb|AGE09664.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436594|gb|AGE09665.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436596|gb|AGE09666.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436598|gb|AGE09667.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436600|gb|AGE09668.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436602|gb|AGE09669.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436606|gb|AGE09671.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436608|gb|AGE09672.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436610|gb|AGE09673.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436612|gb|AGE09674.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|444436614|gb|AGE09675.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 323
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 138/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|395793295|ref|ZP_10472700.1| protein recA [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395431609|gb|EJF97627.1| protein recA [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 347
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKAKALNAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|255287396|emb|CAQ58037.2| recombinase A [Agrobacterium tumefaciens]
Length = 320
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|6225929|sp|Q9ZIQ0.1|RECA_RHOVI RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|3769371|gb|AAC64504.1| RecA protein [Blastochloris viridis]
Length = 348
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L + + ISTGSL LD+ALGIGGLP+GR+V
Sbjct: 1 MDKTKALDAALTQIERAFGKGSIMRLGKSGAALEVETISTGSLGLDIALGIGGLPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 61 EIFGPESSGKTTLALHTVAEAQKKGGVCAFIDAEHALDPLYARKLGVNLDDLLISQPDAG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSQPGMQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 SRSNCMVIFINQIRM 195
>gi|424910654|ref|ZP_18334031.1| protein RecA [Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392846685|gb|EJA99207.1| protein RecA [Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 362
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 192 SISKSKCMVIFINQIRM 208
>gi|207366278|emb|CAQ58034.1| recombinase A [Agrobacterium tumefaciens]
gi|207366342|emb|CAQ58066.1| recombinase A [Agrobacterium tumefaciens]
gi|207366344|emb|CAQ58067.1| recombinase A [Agrobacterium tumefaciens]
gi|255287394|emb|CAQ58036.2| recombinase A [Agrobacterium tumefaciens]
gi|444299282|emb|CCP29590.1| recombinase A, partial [Agrobacterium genomosp. 7]
gi|444299290|emb|CCP29594.1| recombinase A, partial [Agrobacterium genomosp. 9]
Length = 323
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|406925490|gb|EKD61951.1| hypothetical protein ACD_54C00009G0002 [uncultured bacterium]
Length = 355
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 146/200 (73%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL AL+Q+ FGK S++ L + PV+ STGSL LD+ALGIGGLP
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKL-----GQDNPVMDIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTTL LHV+ EAQK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 70 QGRIVEIYGPESSGKTTLTLHVVAEAQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ +IVVDSVAAL+PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVSLIVVDSVAALVPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTASIGRSNCMVIFINQIRM 209
>gi|395789472|ref|ZP_10468992.1| protein recA [Bartonella taylorii 8TBB]
gi|395430015|gb|EJF96067.1| protein recA [Bartonella taylorii 8TBB]
Length = 347
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|146424877|emb|CAM12547.1| recombinase A [Ochrobactrum anthropi]
gi|146424881|emb|CAM12549.1| recombinase A [Ochrobactrum anthropi]
gi|146424883|emb|CAM12550.1| recombinase A [Ochrobactrum anthropi]
gi|146424885|emb|CAM12551.1| recombinase A [Ochrobactrum anthropi]
gi|146424887|emb|CAM12552.1| recombinase A [Ochrobactrum anthropi]
gi|146424889|emb|CAM12553.1| recombinase A [Ochrobactrum anthropi]
gi|146424891|emb|CAM12554.1| recombinase A [Ochrobactrum anthropi]
gi|146424895|emb|CAM12556.1| recombinase A [Ochrobactrum anthropi]
gi|146424897|emb|CAM12557.1| recombinase A [Ochrobactrum anthropi]
gi|146424899|emb|CAM12558.1| recombinase A [Ochrobactrum anthropi]
gi|146424901|emb|CAM12559.1| recombinase A [Ochrobactrum anthropi]
gi|146424903|emb|CAM12560.1| recombinase A [Ochrobactrum anthropi]
gi|146424905|emb|CAM12561.1| recombinase A [Ochrobactrum anthropi]
gi|146424907|emb|CAM12562.1| recombinase A [Ochrobactrum anthropi]
gi|146424909|emb|CAM12563.1| recombinase A [Ochrobactrum anthropi]
gi|146424911|emb|CAM12564.1| recombinase A [Ochrobactrum anthropi]
gi|146424913|emb|CAM12565.1| recombinase A [Ochrobactrum anthropi]
gi|146424915|emb|CAM12566.1| recombinase A [Ochrobactrum anthropi]
gi|146424917|emb|CAM12567.1| recombinase A [Ochrobactrum anthropi]
gi|146424919|emb|CAM12568.1| recombinase A [Ochrobactrum anthropi]
gi|146424921|emb|CAM12569.1| recombinase A [Ochrobactrum anthropi]
gi|146424923|emb|CAM12570.1| recombinase A [Ochrobactrum anthropi]
gi|146424925|emb|CAM12571.1| recombinase A [Ochrobactrum anthropi]
gi|146424927|emb|CAM12572.1| recombinase A [Ochrobactrum anthropi]
gi|146424929|emb|CAM12573.1| recombinase A [Ochrobactrum anthropi]
gi|146424931|emb|CAM12574.1| recombinase A [Ochrobactrum anthropi]
gi|146424933|emb|CAM12575.1| recombinase A [Ochrobactrum anthropi]
gi|146424935|emb|CAM12576.1| recombinase A [Ochrobactrum anthropi]
gi|146424937|emb|CAM12577.1| recombinase A [Ochrobactrum anthropi]
gi|146424939|emb|CAM12578.1| recombinase A [Ochrobactrum anthropi]
gi|146424941|emb|CAM12579.1| recombinase A [Ochrobactrum anthropi]
gi|146424943|emb|CAM12580.1| recombinase A [Ochrobactrum anthropi]
gi|146424945|emb|CAM12581.1| recombinase A [Ochrobactrum anthropi]
gi|146424947|emb|CAM12582.1| recombinase A [Ochrobactrum anthropi]
gi|146424949|emb|CAM12583.1| recombinase A [Ochrobactrum anthropi]
gi|146424951|emb|CAM12584.1| recombinase A [Ochrobactrum anthropi]
gi|146424953|emb|CAM12585.1| recombinase A [Ochrobactrum anthropi]
gi|146424955|emb|CAM12586.1| recombinase A [Ochrobactrum anthropi]
gi|146424957|emb|CAM12587.1| recombinase A [Ochrobactrum anthropi]
gi|146424959|emb|CAM12588.1| recombinase A [Ochrobactrum anthropi]
gi|146424961|emb|CAM12589.1| recombinase A [Ochrobactrum anthropi]
gi|146424963|emb|CAM12590.1| recombinase A [Ochrobactrum anthropi]
gi|146424965|emb|CAM12591.1| recombinase A [Ochrobactrum anthropi]
gi|146424967|emb|CAM12592.1| recombinase A [Ochrobactrum anthropi]
gi|146424969|emb|CAM12593.1| recombinase A [Ochrobactrum anthropi]
gi|146424971|emb|CAM12594.1| recombinase A [Ochrobactrum anthropi]
gi|146424977|emb|CAM12597.1| recombinase A [Ochrobactrum anthropi]
gi|146424979|emb|CAM12598.1| recombinase A [Ochrobactrum anthropi]
gi|146424981|emb|CAM12599.1| recombinase A [Ochrobactrum anthropi]
gi|146424983|emb|CAM12600.1| recombinase A [Ochrobactrum anthropi]
gi|148887235|emb|CAM12784.1| recombinase A [Ochrobactrum anthropi]
gi|148887247|emb|CAM12790.1| recombinase A [Ochrobactrum anthropi]
gi|148897665|emb|CAM18486.1| recombinase A [Ochrobactrum intermedium]
gi|148897695|emb|CAM18501.1| recombinase A [Ochrobactrum lupini]
gi|148897697|emb|CAM18502.1| recombinase A [Ochrobactrum tritici]
gi|148897699|emb|CAM18503.1| recombinase A [Ochrobactrum tritici]
gi|148897701|emb|CAM18504.1| recombinase A [Ochrobactrum tritici]
gi|148897711|emb|CAM18509.1| recombinase A [Ochrobactrum anthropi]
Length = 299
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 138/191 (72%), Gaps = 10/191 (5%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLPKGRIVEIYG 127
ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 3 ALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYG 57
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 58 PESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQAL 117
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 118 EITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSN 177
Query: 248 TLIIFLNQVKV 258
++IF+NQ+++
Sbjct: 178 CMVIFINQIRM 188
>gi|207366280|emb|CAQ58035.1| recombinase A [Agrobacterium tumefaciens]
gi|207366286|emb|CAQ58038.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|146424879|emb|CAM12548.1| recombinase A [Ochrobactrum anthropi]
Length = 298
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 138/191 (72%), Gaps = 10/191 (5%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLPKGRIVEIYG 127
ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 3 ALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYG 57
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 58 PESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQAL 117
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 118 EITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSN 177
Query: 248 TLIIFLNQVKV 258
++IF+NQ+++
Sbjct: 178 CMVIFINQIRM 188
>gi|207366324|emb|CAQ58057.1| recombinase A [Agrobacterium tumefaciens]
gi|207366354|emb|CAQ58072.1| recombinase A [Agrobacterium tumefaciens]
gi|207366360|emb|CAQ58075.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 138/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|395765153|ref|ZP_10445769.1| protein recA [Bartonella sp. DB5-6]
gi|395413006|gb|EJF79485.1| protein recA [Bartonella sp. DB5-6]
Length = 347
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|262038532|ref|ZP_06011901.1| protein RecA [Leptotrichia goodfellowii F0264]
gi|261747401|gb|EEY34871.1| protein RecA [Leptotrichia goodfellowii F0264]
Length = 382
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 151/205 (73%), Gaps = 6/205 (2%)
Query: 56 EPHDDAKIM-QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLAL 112
E DD K+ +K+ L LAL+Q+ +FG+ S++ L +++ V ISTGS+ LD+AL
Sbjct: 8 EEKDDNKVQSEKERVLNLALTQIQKEFGEGSIMKLGE---NQKMNVKSISTGSINLDMAL 64
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
GIGG+P+GRI+EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+A+G++
Sbjct: 65 GIGGVPRGRIIEIYGAESSGKTTLALHVIAEAQKEGGVAAFIDAEHALDPVYAKALGVNI 124
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+ LLI+QPD+ E L + D L +SG++DVIVVDSVAAL+PK EI + Q+R+M
Sbjct: 125 DELLISQPDTGEQALEIADMLVRSGAMDVIVVDSVAALVPKAEIEGEMGDQQMGLQARLM 184
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVK 257
++ALRK+ ++ +S T++IF+NQ++
Sbjct: 185 SKALRKLTANISKSSTVMIFINQIR 209
>gi|207366322|emb|CAQ58056.1| recombinase A [Agrobacterium tumefaciens]
gi|207366326|emb|CAQ58058.1| recombinase A [Agrobacterium tumefaciens]
gi|207366356|emb|CAQ58073.1| recombinase A [Agrobacterium tumefaciens]
gi|207366358|emb|CAQ58074.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 138/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|257126448|ref|YP_003164562.1| recombinase A [Leptotrichia buccalis C-1013-b]
gi|257050387|gb|ACV39571.1| recA protein [Leptotrichia buccalis C-1013-b]
Length = 370
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 149/206 (72%), Gaps = 5/206 (2%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSL--KRFFGSRRGPVISTGSLKLDLA 111
+++ DD + +K+ L LAL Q+ D+G+ +++ L + R ISTGSL LD+A
Sbjct: 7 EEKEKDDKGLTEKEKMLDLALKQIQKDYGEGAVMKLGENQKMNIR---AISTGSLNLDIA 63
Query: 112 LGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGID 171
LGIGG+P+GRIVEIYG E+SGKTTLALH+I EAQK GG A++D E+ALDP A+A+G++
Sbjct: 64 LGIGGVPRGRIVEIYGAESSGKTTLALHIIAEAQKAGGVVAFIDAEHALDPVYAKALGVN 123
Query: 172 AENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRI 231
+ LLI+QPD+ E L + D L +SG+IDVIVVDSVAAL+PK EI + Q+R+
Sbjct: 124 IDELLISQPDTGEQALEISDMLVRSGAIDVIVVDSVAALVPKAEIEGEMGDQQMGLQARL 183
Query: 232 MTQALRKIHYSLCQSHTLIIFLNQVK 257
M++ALRK+ ++ +S T++IF+NQ++
Sbjct: 184 MSKALRKLTGNIAKSDTVMIFINQIR 209
>gi|207366346|emb|CAQ58068.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 138/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|395787671|ref|ZP_10467263.1| protein recA [Bartonella birtlesii LL-WM9]
gi|395410293|gb|EJF76848.1| protein recA [Bartonella birtlesii LL-WM9]
Length = 347
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|112362894|emb|CAL34148.1| recombinase A [Brucella microti CCM 4915]
gi|112362896|emb|CAL34149.1| recombinase A [Brucella microti]
Length = 299
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 137/186 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISRSNCMVIF 182
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 183 INQIRM 188
>gi|118588632|ref|ZP_01546040.1| recombinase A [Stappia aggregata IAM 12614]
gi|118438618|gb|EAV45251.1| recombinase A [Labrenzia aggregata IAM 12614]
Length = 344
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 142/200 (71%), Gaps = 11/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL ALSQ+ FGK S++ + + G V+ STGSL LD+ALGIGGLP
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMKMGQ------GQVVEVQAVSTGSLGLDIALGIGGLP 54
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+
Sbjct: 55 RGRIVEIYGPESSGKTTLALHAVSEAQKTGGICAFIDAEHALDPIYARKLGVDIDNLLIS 114
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK
Sbjct: 115 QPDAGEQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRK 174
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S ++IF+NQ+++
Sbjct: 175 LTASISKSKCMVIFINQIRM 194
>gi|338707127|ref|YP_004661328.1| recA protein [Zymomonas mobilis subsp. pomaceae ATCC 29192]
gi|336293931|gb|AEI37038.1| recA protein [Zymomonas mobilis subsp. pomaceae ATCC 29192]
Length = 355
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 144/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 16 MDKQKALDAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ E+L+++QP
Sbjct: 72 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVNTEDLIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++V+DSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 132 DTGEQALEITDTLIRSNAVDILVIDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 191
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +SHTL+IF+NQV++
Sbjct: 192 GSINRSHTLVIFINQVRM 209
>gi|395767195|ref|ZP_10447730.1| protein recA [Bartonella doshiae NCTC 12862]
gi|395414508|gb|EJF80950.1| protein recA [Bartonella doshiae NCTC 12862]
Length = 347
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|347446582|dbj|BAK82133.1| recombination protein RecA [Calyptogena fossajaponica symbiont]
Length = 344
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 143/194 (73%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK AL+ AL+Q+ FGK S++ L V+STGSL LD+ALGIGGLP+GR+VE
Sbjct: 4 QKKQALKAALAQIDKQFGKGSVIFLGDDQAQSDIEVVSTGSLSLDIALGIGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ +G++ ++LLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIAEVQKLGGIAAFIDAEHALDPKYAKCLGVNTDDLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGS+D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGSVDIVVIDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 245 QSHTLIIFLNQVKV 258
+++T++IF+NQ+++
Sbjct: 184 RTNTMVIFINQLRM 197
>gi|302389774|ref|YP_003825595.1| recombinase A [Thermosediminibacter oceani DSM 16646]
gi|302200402|gb|ADL07972.1| RecA protein [Thermosediminibacter oceani DSM 16646]
Length = 343
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 143/195 (73%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+M+K AL +AL+Q+ FGK S++ L VI TG+L LD+ALG+GG+P+GRI
Sbjct: 1 MMEKQKALEMALAQIERQFGKGSIMRLGEAESKFNVEVIPTGALPLDIALGVGGVPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTT+ALH++ EAQK GG A++D E+ALDP+ A +G+D +NLLI+QPD+
Sbjct: 61 IEIFGPESSGKTTVALHIVAEAQKAGGTAAFIDAEHALDPTYARKLGVDTDNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DVIV+DSVAAL+PK E+ + + Q+R+M+QALRK+ S
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPKAELEGEMGEAHVGLQARLMSQALRKLAGS 180
Query: 243 LCQSHTLIIFLNQVK 257
+ +S T+ IF+NQ++
Sbjct: 181 ISKSKTVAIFINQLR 195
>gi|374281860|gb|AEZ04933.1| recombinase A, partial [Rhizobium phaseoli]
Length = 192
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 137/192 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVK 257
S+T++IF+ Q++
Sbjct: 181 SNTMVIFITQIR 192
>gi|108804260|ref|YP_644197.1| recA protein [Rubrobacter xylanophilus DSM 9941]
gi|123177369|sp|Q1AW43.1|RECA_RUBXD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|108765503|gb|ABG04385.1| RecA protein [Rubrobacter xylanophilus DSM 9941]
Length = 344
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL A+SQ+ FGK S++ + S++ ISTGSL LDLALG+GG+P+GRIV
Sbjct: 3 LDKSKALDTAVSQIERQFGKGSIMRMGDR-ASQKVASISTGSLALDLALGVGGVPRGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH+I EAQ+ GG A++D E+ALDP+ AEA+G+D ENL +QPDS
Sbjct: 62 EIFGPESSGKTTLALHIIAEAQRAGGLAAFIDAEHALDPTYAEAIGVDLENLYFSQPDSG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++D +V+DSVAAL+P+ EI + + Q+R+M+QALRK+ SL
Sbjct: 122 EQALEIADTLVRSGALDAVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSL 181
Query: 244 CQSHTLIIFLNQVK 257
+S T IF+NQ++
Sbjct: 182 SRSGTTAIFINQLR 195
>gi|46200836|ref|ZP_00056375.2| COG0468: RecA/RadA recombinase [Magnetospirillum magnetotacticum
MS-1]
Length = 351
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 143/199 (71%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ L V+STGSL LD+ALGIGG+P+
Sbjct: 2 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 61
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLALH+I EAQK GG CA++D E+ALDPS A +G+ + LLI+Q
Sbjct: 62 GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVALDELLISQ 121
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 122 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 181
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 182 TGSVSKSKTIVIFINQIRM 200
>gi|90423078|ref|YP_531448.1| recombinase A [Rhodopseudomonas palustris BisB18]
gi|90105092|gb|ABD87129.1| RecA protein [Rhodopseudomonas palustris BisB18]
Length = 363
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGR+V
Sbjct: 15 MDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVV 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH EAQK GG CA++D E+ALDP A +G++ + LLI+QPD
Sbjct: 75 EIYGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVDELLISQPDHG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 135 EQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 194
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 195 NKSNTMVIFINQIRM 209
>gi|423713065|ref|ZP_17687325.1| protein recA [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395424691|gb|EJF90871.1| protein recA [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 347
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKAKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK+GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKIGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|270157136|ref|ZP_06185793.1| recombinase A [Legionella longbeachae D-4968]
gi|289164459|ref|YP_003454597.1| RecA protein [Legionella longbeachae NSW150]
gi|269989161|gb|EEZ95415.1| recombinase A [Legionella longbeachae D-4968]
gi|288857632|emb|CBJ11472.1| RecA protein [Legionella longbeachae NSW150]
Length = 347
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + +R ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSSVARDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G++ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKIGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVI+VDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|406367650|gb|AFS44267.1| recombinase A, partial [Bradyrhizobium japonicum]
Length = 190
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 137/189 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIF 252
+SHT++IF
Sbjct: 182 NKSHTMVIF 190
>gi|198385751|gb|ACH86219.1| RecA [Ensifer adhaerens]
Length = 193
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 137/193 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGGKDSIIEIETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAIDVLVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLN 254
S+ +S+ ++IF+N
Sbjct: 181 SISKSNCMVIFIN 193
>gi|207366328|emb|CAQ58059.1| recombinase A [Agrobacterium tumefaciens]
gi|207366330|emb|CAQ58060.1| recombinase A [Agrobacterium tumefaciens]
gi|207366332|emb|CAQ58061.1| recombinase A [Agrobacterium tumefaciens]
gi|207366334|emb|CAQ58062.1| recombinase A [Agrobacterium tumefaciens]
gi|207366336|emb|CAQ58063.1| recombinase A [Agrobacterium tumefaciens]
gi|207366338|emb|CAQ58064.1| recombinase A [Agrobacterium tumefaciens]
gi|207366340|emb|CAQ58065.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|339777241|gb|AEK05517.1| recombinase A [Rhizobium gallicum]
Length = 194
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 137/194 (70%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPK
Sbjct: 1 EXKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLSLDIALGIGGLPK 60
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+Q
Sbjct: 61 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 120
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 180
Query: 240 HYSLCQSHTLIIFL 253
S+ +S+T++IF+
Sbjct: 181 TASISKSNTMVIFI 194
>gi|49474376|ref|YP_032418.1| recombinase A [Bartonella quintana str. Toulouse]
gi|59798256|sp|Q6FZF0.1|RECA_BARQU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49239880|emb|CAF26278.1| recA protein [Bartonella quintana str. Toulouse]
Length = 347
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|403530664|ref|YP_006665193.1| recombinase A [Bartonella quintana RM-11]
gi|403232735|gb|AFR26478.1| recombinase A [Bartonella quintana RM-11]
Length = 347
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|163852021|ref|YP_001640064.1| recA protein [Methylobacterium extorquens PA1]
gi|218530775|ref|YP_002421591.1| recA protein [Methylobacterium extorquens CM4]
gi|240139288|ref|YP_002963763.1| DNA strand exchange and recombination protein [Methylobacterium
extorquens AM1]
gi|254561744|ref|YP_003068839.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Methylobacterium extorquens DM4]
gi|418061813|ref|ZP_12699648.1| Protein recA [Methylobacterium extorquens DSM 13060]
gi|163663626|gb|ABY30993.1| recA protein [Methylobacterium extorquens PA1]
gi|218523078|gb|ACK83663.1| recA protein [Methylobacterium extorquens CM4]
gi|240009260|gb|ACS40486.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Methylobacterium extorquens AM1]
gi|254269022|emb|CAX24983.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Methylobacterium extorquens DM4]
gi|373564630|gb|EHP90724.1| Protein recA [Methylobacterium extorquens DSM 13060]
Length = 366
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 21 KSKAIEAALTQIERAFGKGSIMRLGKSDKVQEVETISTGSLGLDIALGVGGLPRGRVVEI 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 81 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 141 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 200
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 201 SNCMVIFINQIRM 213
>gi|334143598|ref|YP_004536754.1| protein recA [Thioalkalimicrobium cyclicum ALM1]
gi|333964509|gb|AEG31275.1| Protein recA [Thioalkalimicrobium cyclicum ALM1]
Length = 347
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 138/193 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + R ISTGSL LD+ALGI GLPKGR++EI
Sbjct: 5 KQKALAAALGQIEKQFGKGSIMRMGDSTAPRDIEAISTGSLGLDIALGIAGLPKGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I EAQK GG A++D E+ALDPS AE +G+D +NLL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAIAEAQKKGGVAAFVDAEHALDPSYAEKLGVDVDNLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
++TL+IF+NQ+++
Sbjct: 185 TNTLVIFINQIRM 197
>gi|334345425|ref|YP_004553977.1| protein recA [Sphingobium chlorophenolicum L-1]
gi|334102047|gb|AEG49471.1| Protein recA [Sphingobium chlorophenolicum L-1]
Length = 357
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL ALSQ+ FGK S + L GSR ISTGSL LD+ALGIGGLP+G
Sbjct: 16 MDRQKALEAALSQIDRAFGKGSAMKL----GSREKIEIEAISTGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 72 RIIEIYGPESSGKTTLALHAIAEAQKTGGIAAFVDAEHALDPGYAKKLGVDIDELIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 132 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 191
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQV++
Sbjct: 192 GSISRSKCMVIFINQVRM 209
>gi|224087995|ref|XP_002308284.1| predicted protein [Populus trichocarpa]
gi|222854260|gb|EEE91807.1| predicted protein [Populus trichocarpa]
Length = 418
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 153/207 (73%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +K+ AL+ AL Q+ + FGK +++ R + PV+STGS LD+ALG
Sbjct: 46 DGSESGEENMSKKELALQQALDQITSQFGKGAIMWFGRSEAPKNVPVVSTGSFALDIALG 105
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
GG PKGR+VEI+G EASGKTTLALHVI EAQK GGYC ++D E+ALD SLA+A+G++ E
Sbjct: 106 CGGFPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSSLAKAIGVNTE 165
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 166 NLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQARLMS 225
Query: 234 QALRKIHYSLCQSHTLIIFLNQVKVLL 260
QALRK+ +SL QS T+++F+NQV+ L
Sbjct: 226 QALRKLSHSLSQSQTILVFINQVRAKL 252
>gi|444299278|emb|CCP29588.1| recombinase A, partial [Rhizobium pusense]
gi|444299280|emb|CCP29589.1| recombinase A, partial [Rhizobium pusense]
Length = 319
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 137/193 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVKV 258
S ++IF+NQ+++
Sbjct: 181 SKCMVIFINQIRM 193
>gi|159184959|ref|NP_354855.2| RecA protein [Agrobacterium fabrum str. C58]
gi|335036228|ref|ZP_08529555.1| recombinase A [Agrobacterium sp. ATCC 31749]
gi|417633|sp|P33156.1|RECA_AGRT5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|159140237|gb|AAK87640.2| RecA protein [Agrobacterium fabrum str. C58]
gi|333792119|gb|EGL63489.1| recombinase A [Agrobacterium sp. ATCC 31749]
Length = 363
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 192 SISKSKCMVIFINQIRM 208
>gi|395777979|ref|ZP_10458492.1| protein recA [Bartonella elizabethae Re6043vi]
gi|423715905|ref|ZP_17690126.1| protein recA [Bartonella elizabethae F9251]
gi|395418288|gb|EJF84615.1| protein recA [Bartonella elizabethae Re6043vi]
gi|395429207|gb|EJF95281.1| protein recA [Bartonella elizabethae F9251]
Length = 347
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|374852275|dbj|BAL55212.1| recombination protein RecA [uncultured prokaryote]
Length = 354
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M + AL LA+SQ+ FGK +++ + + VI TG++ LDLALG+GG+P+GRI
Sbjct: 1 MDRQKALELAISQIERTFGKGAIMRMGEDASKLQVDVIPTGAIALDLALGVGGIPRGRIT 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALHVI +AQK+GG AY+D E+A DP AE +G+D +NLLI+QPD+
Sbjct: 61 EIFGPESSGKTTLALHVIAQAQKMGGIAAYIDAEHAFDPVYAERLGVDLDNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S T +IF+NQ+++
Sbjct: 181 SRSKTAVIFINQLRM 195
>gi|357030598|ref|ZP_09092542.1| recombinase A [Gluconobacter morbifer G707]
gi|356415292|gb|EHH68935.1| recombinase A [Gluconobacter morbifer G707]
Length = 345
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 146/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ ++LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDDLLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL+IFLNQ+++
Sbjct: 177 GTVARSNTLVIFLNQIRM 194
>gi|319404396|emb|CBI77999.1| RecA protein [Bartonella rochalimae ATCC BAA-1498]
Length = 347
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALEAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D NL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLANLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDSLPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|163868622|ref|YP_001609831.1| recombinase A [Bartonella tribocorum CIP 105476]
gi|189039590|sp|A9IVY9.1|RECA_BART1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|161018278|emb|CAK01836.1| RecA protein [Bartonella tribocorum CIP 105476]
Length = 347
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|356561937|ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
[Glycine max]
Length = 459
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 118/234 (50%), Positives = 161/234 (68%), Gaps = 18/234 (7%)
Query: 24 SFSQNGRRDAITCIGMNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGK 83
SFS GRR + + D + + +K+ AL+ AL Q+ + FGK
Sbjct: 59 SFSSKGRRRSKS------------------DGSDSGEENMSKKELALQQALDQITSAFGK 100
Query: 84 ESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKE 143
S++ L R + PV+STGS LD+ALGIGGLPKGR+VEIYG EASGKTTLALHVI E
Sbjct: 101 GSIMWLGRSVSPKNVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAE 160
Query: 144 AQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIV 203
AQK GGYC ++D E+ALD +LAE++G++ NLL++QPD E LS+VDTL +SGS+DV+V
Sbjct: 161 AQKQGGYCVFVDAEHALDKTLAESIGVNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVVV 220
Query: 204 VDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
VDSVAAL+PK E+ + + Q+R+M+QALRK+ ++L S T++IF+NQV+
Sbjct: 221 VDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHALSLSQTILIFINQVR 274
>gi|304391434|ref|ZP_07373376.1| protein RecA [Ahrensia sp. R2A130]
gi|303295663|gb|EFL90021.1| protein RecA [Ahrensia sp. R2A130]
Length = 368
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL AL Q+ FGK S++ L + ISTG + LD+ALG+GGLPKGR
Sbjct: 12 KKLDKSKALEAALGQIERAFGKGSIMRLGANEQAVEIETISTGCIGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTT+ALH + EAQK GG CA++D E+ALDP A+ +G++ ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTMALHTVAEAQKEGGICAFVDAEHALDPVYAKKLGVNLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+ D++V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEIADTLVRSGACDILVIDSVAALTPRAEIEGEMGASLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>gi|262277415|ref|ZP_06055208.1| protein RecA [alpha proteobacterium HIMB114]
gi|262224518|gb|EEY74977.1| protein RecA [alpha proteobacterium HIMB114]
Length = 376
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+ Q+ +FGK S++ L + + ISTGSL LD+ALGIGGLPK RIVEI
Sbjct: 19 KQKALEAAIGQIDQNFGKGSVMKLGQKDQALDIEAISTGSLSLDIALGIGGLPKSRIVEI 78
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL VI EAQK GG CA++D E+ALDP+ A +G+D LLI+QPD+ E
Sbjct: 79 YGPESSGKTTLALQVIAEAQKTGGVCAFVDAEHALDPTYARKLGVDTSELLISQPDTGEQ 138
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++ V+VVDSVAAL P+ E+ + + Q+R+M+QALRK+ S+ +
Sbjct: 139 ALEIADTLVRSGAVSVLVVDSVAALTPRAELEGDMGDTHVGLQARLMSQALRKLTGSISK 198
Query: 246 SHTLIIFLNQVKV 258
S+T++IF+NQ+++
Sbjct: 199 SNTMVIFINQIRM 211
>gi|347758444|ref|YP_004866006.1| protein RecA [Micavibrio aeruginosavorus ARL-13]
gi|347590962|gb|AEP10004.1| protein RecA [Micavibrio aeruginosavorus ARL-13]
Length = 383
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 144/194 (74%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL+Q+ FGK S++ L + +STGSL LD+ALGIGGLP+GRI+E
Sbjct: 15 EKTKALDAALAQIERAFGKGSIMKLTGDSNPMQVEAVSTGSLGLDIALGIGGLPRGRIIE 74
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
++G E+SGKTTLAL VI EAQK GG CA +D E+ALDPS A+ +G++ ++LLI+QPD+ E
Sbjct: 75 VFGPESSGKTTLALQVIAEAQKAGGTCAIVDAEHALDPSYAKKLGVNIDDLLISQPDTGE 134
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + DTL +SG++DV+V+DSVAAL+P+ E+ + + Q+R+M+QALRKI S+
Sbjct: 135 QALEIADTLVRSGALDVLVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKITGSIS 194
Query: 245 QSHTLIIFLNQVKV 258
+S T++IF+NQ+++
Sbjct: 195 RSRTIVIFINQIRM 208
>gi|444299292|emb|CCP29595.1| recombinase A, partial [Rhizobium nepotum]
gi|444299294|emb|CCP29596.1| recombinase A, partial [Rhizobium nepotum]
Length = 323
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 138/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLP+GR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I E QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAECQKKGGICAFVDAEHALDPIYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|444299284|emb|CCP29591.1| recombinase A, partial [Agrobacterium genomosp. 7]
gi|444299286|emb|CCP29592.1| recombinase A, partial [Agrobacterium genomosp. 7]
Length = 319
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 136/193 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVKV 258
S ++IF+NQ+++
Sbjct: 181 SKCMVIFINQIRM 193
>gi|451942153|ref|YP_007462790.1| recombinase A [Bartonella vinsonii subsp. berkhoffii str. Winnie]
gi|451901540|gb|AGF76002.1| recombinase A [Bartonella vinsonii subsp. berkhoffii str. Winnie]
Length = 347
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKAKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ +++F+NQ+++
Sbjct: 181 FRSNCMVVFINQIRM 195
>gi|169831007|ref|YP_001716989.1| recA protein [Candidatus Desulforudis audaxviator MP104C]
gi|169637851|gb|ACA59357.1| recA protein [Candidatus Desulforudis audaxviator MP104C]
Length = 345
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 143/195 (73%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
++ + AL LAL+Q+ FGK +++ L G VI TG+L LDLALG+GG+P+GR+
Sbjct: 1 MIDRQKALELALAQIERQFGKGAVMKLGEATGKLSVEVIPTGALALDLALGVGGMPRGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G EASGKTT+ALHVI EAQ++GG A++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 IEIFGPEASGKTTVALHVIAEAQRMGGTAAFIDAEHALDPVYAGKVGVDIENLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DV+V+DSVAAL+P+ E+ + ++ Q+R+M+QALRK+
Sbjct: 121 GEQALEITEALVRSGAVDVVVIDSVAALVPRAELEGEMGDIHVGLQARLMSQALRKLTAV 180
Query: 243 LCQSHTLIIFLNQVK 257
+ +S T+ IF+NQ++
Sbjct: 181 IGKSRTVAIFINQIR 195
>gi|154248001|ref|YP_001418959.1| recombinase A [Xanthobacter autotrophicus Py2]
gi|154162086|gb|ABS69302.1| recA protein [Xanthobacter autotrophicus Py2]
Length = 361
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + + TGSL LD+A+GIGGLPKGR+V
Sbjct: 14 MDKTKALDAALSQIERHFGKGSIMRLGKGGKALEIESVPTGSLGLDIAIGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 74 EIFGPESSGKTTLALHTVAEAQKRGGTCAFIDAEHALDPIYARKLGVNLDDLLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALTPRAELDGEMGDSQPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 SKSNTMVIFINQIRM 208
>gi|444299288|emb|CCP29593.1| recombinase A, partial [Agrobacterium fabrum]
Length = 321
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 137/193 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLNQVKV 258
S ++IF+NQ+++
Sbjct: 181 SKCMVIFINQIRM 193
>gi|398386042|ref|ZP_10544052.1| protein RecA [Sphingobium sp. AP49]
gi|397718974|gb|EJK79549.1| protein RecA [Sphingobium sp. AP49]
Length = 357
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLPKG
Sbjct: 16 MDRQKALEAALAQIDRAFGKGSAMKL----GSREKIEIEAISTGSLGLDIALGIGGLPKG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 72 RIIEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPGYAKKLGVDIDELIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 132 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 191
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQV++
Sbjct: 192 GSISRSKCMVIFINQVRM 209
>gi|393770443|ref|ZP_10358939.1| recA protein [Methylobacterium sp. GXF4]
gi|392724123|gb|EIZ81492.1| recA protein [Methylobacterium sp. GXF4]
Length = 363
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ ALSQ+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 18 KSKAIDAALSQIERAFGKGSIMRLGKNDKVQEVETISTGSLGLDIALGVGGLPRGRVVEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 198 SNCMVIFINQIRM 210
>gi|408375592|ref|ZP_11173255.1| recA protein [Alcanivorax hongdengensis A-11-3]
gi|407764556|gb|EKF73030.1| recA protein [Alcanivorax hongdengensis A-11-3]
Length = 344
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 143/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ + G R R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 4 KSKALSAALSQIERQFGKGSVMRM----GDRKRERMPSISTGSLGLDIALGIGGLPKGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP AE +G++ ++L+++QPD+
Sbjct: 60 VEIYGPESSGKTTLTLSVIAQAQKKGATCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL+PK EI + + Q+R+M+QALRKI +
Sbjct: 120 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGN 179
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++TL++F+NQ+++
Sbjct: 180 VKNANTLVVFINQIRM 195
>gi|388456113|ref|ZP_10138408.1| recombinase A [Fluoribacter dumoffii Tex-KL]
Length = 348
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSNVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G++ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DVI+VDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|147677636|ref|YP_001211851.1| RecA/RadA recombinase [Pelotomaculum thermopropionicum SI]
gi|146273733|dbj|BAF59482.1| RecA/RadA recombinase [Pelotomaculum thermopropionicum SI]
Length = 342
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 140/192 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL LAL Q+ FGK S++ L VI TG+L LD+ALG+GG+P+GR++EI
Sbjct: 4 RQKALELALMQIERQFGKGSIMKLGEASAKLNVEVIPTGALALDIALGVGGVPRGRVIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTT+ALHVI EAQK+GG A++D E+ALDP A+ +G+D ENLL++QPD+ E
Sbjct: 64 FGPESSGKTTVALHVIAEAQKMGGTAAFVDAEHALDPVYAKNLGVDIENLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++DVIVVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIAEALVRSGAVDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAISK 183
Query: 246 SHTLIIFLNQVK 257
S T +IF+NQ++
Sbjct: 184 SRTTVIFINQIR 195
>gi|284047740|ref|YP_003398079.1| recA protein [Acidaminococcus fermentans DSM 20731]
gi|283951961|gb|ADB46764.1| recA protein [Acidaminococcus fermentans DSM 20731]
Length = 362
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 138/193 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K+ AL AL Q+ DFGK S++ L I TG+L LD+ALG+GG+P+GRI+E
Sbjct: 6 EKNKALDAALKQIEKDFGKGSIMKLGAASAKMNIETIPTGALSLDIALGVGGIPRGRIIE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH+I EAQK GGY A++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 66 IYGPESSGKTTVALHMIAEAQKRGGYAAFIDAEHALDPEYARHLGVDIDNLLISQPDTGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 126 QALEICDALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGVIA 185
Query: 245 QSHTLIIFLNQVK 257
+S T +F+NQ++
Sbjct: 186 KSRTATVFINQIR 198
>gi|395784151|ref|ZP_10463990.1| protein recA [Bartonella melophagi K-2C]
gi|395423906|gb|EJF90094.1| protein recA [Bartonella melophagi K-2C]
Length = 347
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALDSALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+ E+LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVKLEDLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG+IDV+VVDSVAAL P+ EI +N Q+R+M++ALRK+ S+
Sbjct: 121 EQALEIAETLVRSGAIDVLVVDSVAALTPRAEIDGEMNDSVPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRI 195
>gi|451940784|ref|YP_007461422.1| recombinase A [Bartonella australis Aust/NH1]
gi|451900171|gb|AGF74634.1| recombinase A [Bartonella australis Aust/NH1]
Length = 347
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVSTGSLSLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I E QK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHSIAEIQKSGGVCAFIDAEHALDPVYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI ++ Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|163759602|ref|ZP_02166687.1| recombinase A [Hoeflea phototrophica DFL-43]
gi|162283199|gb|EDQ33485.1| recombinase A [Hoeflea phototrophica DFL-43]
Length = 360
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 139/199 (69%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K + K AL ALSQ+ FGK S++ L I TGSL LD+ALG+GGLPK
Sbjct: 10 EEKSVDKSKALDAALSQIERSFGKGSIMKLGANESVVEIETIPTGSLGLDIALGVGGLPK 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 130 PDTGEQALEITDTLVRSGALDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S+ ++IF+NQ+++
Sbjct: 190 TASISRSNCMVIFINQIRM 208
>gi|49475766|ref|YP_033807.1| recombinase A [Bartonella henselae str. Houston-1]
gi|59798263|sp|Q6G2Z3.1|RECA_BARHE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|49238573|emb|CAF27814.1| recA protein [Bartonella henselae str. Houston-1]
Length = 347
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKIKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|336324365|ref|YP_004604332.1| protein recA [Flexistipes sinusarabici DSM 4947]
gi|336107946|gb|AEI15764.1| Protein recA [Flexistipes sinusarabici DSM 4947]
Length = 348
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ LAL ++ DFGK +++ L + + PVI TGSL LD+ALG+GG+P+GRIVEI
Sbjct: 5 KQKAIDLALGKIERDFGKGAVMRLGDK-AAEKLPVIPTGSLSLDIALGVGGVPRGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALHVI EAQK GG A++D E+A+DP A+A+G+D +NLL++QPDS E
Sbjct: 64 YGAESSGKTTVALHVIAEAQKKGGVAAFVDAEHAMDPVYADAIGVDTDNLLVSQPDSGEA 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SG++DV+V+DSVAAL P+ EI + + Q+R+M+QALRK+ + +
Sbjct: 124 ALEIAETLVRSGAVDVVVIDSVAALTPRAEIEGEMGDAHMGLQARLMSQALRKLTSIVNK 183
Query: 246 SHTLIIFLNQVK 257
S T +IF+NQ +
Sbjct: 184 SRTTLIFINQTR 195
>gi|110834662|ref|YP_693521.1| recA protein [Alcanivorax borkumensis SK2]
gi|110647773|emb|CAL17249.1| recA protein [Alcanivorax borkumensis SK2]
Length = 344
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 143/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ + G R R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 4 KSKALSAALSQIERQFGKGSVMRM----GDRKRERMPSISTGSLGLDVALGIGGLPKGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP AE +G++ ++L+++QPD+
Sbjct: 60 VEIYGPESSGKTTLTLSVIAQAQKKGATCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL+PK EI + + Q+R+M+QALRKI +
Sbjct: 120 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGN 179
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++TL++F+NQ+++
Sbjct: 180 VKNANTLVVFINQIRM 195
>gi|306996353|gb|ADN21396.1| recombination protein A [Rhizobium endophyticum CCGE 2052]
Length = 192
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 136/192 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGAKDSVIEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFL 253
S+ +S+T++IF+
Sbjct: 181 SISKSNTMVIFI 192
>gi|269469106|gb|EEZ80654.1| RecA/RadA recombinase [uncultured SUP05 cluster bacterium]
Length = 335
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 143/198 (72%), Gaps = 8/198 (4%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG----PVISTGSLKLDLALGIGGLPKG 120
QK AL+ AL+Q+ FGK S++ F G +STGSL LD+ALGIGGLP+G
Sbjct: 4 QKKQALKAALAQIDKQFGKGSVM----FLGDENAHADIEAVSTGSLSLDIALGIGGLPRG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R+VEIYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ +G++ ++LLI+QP
Sbjct: 60 RVVEIYGPESSGKTTLTLHVIAEMQKLGGTAAFIDAEHALDPQYAKRLGVNTDDLLISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + D L +SGS+D++V+DSVAAL PK EI + + Q+R+M+QALRK+
Sbjct: 120 DTGEQALEITDMLVRSGSVDIVVIDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +++T++IF+NQ+++
Sbjct: 180 SNIKKTNTMVIFINQLRM 197
>gi|148887237|emb|CAM12785.1| recombinase A [Ochrobactrum sp. TK 14]
Length = 299
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV+IYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVKIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 183 INQIRM 188
>gi|148887243|emb|CAM12788.1| recombinase A [Ochrobactrum intermedium]
Length = 299
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 136/186 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQ GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQXKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIF 182
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 183 INQIRM 188
>gi|188581876|ref|YP_001925321.1| recA protein [Methylobacterium populi BJ001]
gi|179345374|gb|ACB80786.1| recA protein [Methylobacterium populi BJ001]
Length = 366
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + +STGSL LD+ALG+GGLP+GR++EI
Sbjct: 21 KSKAIEAALTQIERAFGKGSIMRLGKTDKVQEVETVSTGSLGLDIALGVGGLPRGRVIEI 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 81 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 141 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 200
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 201 SNCMVIFINQIRM 213
>gi|402851912|ref|ZP_10900035.1| RecA protein [Rhodovulum sp. PH10]
gi|402497811|gb|EJW09600.1| RecA protein [Rhodovulum sp. PH10]
Length = 365
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 148/199 (74%), Gaps = 8/199 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPK 119
M K AL AL+Q+ FGK S++ L + GS+ P+ +STGSL LD+ALGIGGLP+
Sbjct: 14 MDKTKALDAALTQIERAFGKGSIMRLGK--GSK--PIEIEAVSTGSLGLDIALGIGGLPR 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+VEI+G E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+Q
Sbjct: 70 GRVVEIFGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNLDDLLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+V+DSVAAL+P+ E+ + Q+R+M+QALRK+
Sbjct: 130 PDTGEQALEIADTLVRSGAVDVLVIDSVAALVPRAELEGEMGDAQPGMQARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S+T+++F+NQ+++
Sbjct: 190 TGSISRSNTMVVFINQIRM 208
>gi|148897679|emb|CAM18493.1| recombinase A [Ochrobactrum intermedium]
Length = 299
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 135/186 (72%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALR + S+ +S L+IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRTLTASISRSGCLVIF 182
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 183 INQIRM 188
>gi|374281858|gb|AEZ04932.1| recombinase A, partial [Rhizobium leucaenae]
Length = 188
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 134/188 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFL 253
S+T++IF+
Sbjct: 181 SNTMVIFI 188
>gi|292491237|ref|YP_003526676.1| recA protein [Nitrosococcus halophilus Nc4]
gi|291579832|gb|ADE14289.1| recA protein [Nitrosococcus halophilus Nc4]
Length = 342
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 143/193 (74%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK +++ L R VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 RKKALGAALSQIEKQFGKGAVMRLGDANTVRGVEVISTGSLGLDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G EASGKTTLAL V+ EAQK+GG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 65 FGPEASGKTTLALQVVAEAQKVGGTAAFVDAEHALDPQYAEKLGVNVDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL++F+NQ+++
Sbjct: 185 SNTLVVFINQIRM 197
>gi|158320574|ref|YP_001513081.1| recA protein [Alkaliphilus oremlandii OhILAs]
gi|158140773|gb|ABW19085.1| recA protein [Alkaliphilus oremlandii OhILAs]
Length = 352
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K AL +ALSQ+ FGK S++ L +STGS+ LD+ALGIGG+PKGRI+
Sbjct: 1 MEKKKALDMALSQIEKQFGKGSIMKLGED-AKLNLESVSTGSIGLDVALGIGGIPKGRII 59
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT++LHVI E QK GG A++D E+ALDPS A+ +G+D ENL+++QPD+
Sbjct: 60 EIYGPESSGKTTVSLHVIAETQKRGGIAAFIDAEHALDPSYAKNLGVDIENLIVSQPDTG 119
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 120 EQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLAGSI 179
Query: 244 CQSHTLIIFLNQVK 257
+S+T+ IF+NQ++
Sbjct: 180 SKSNTIAIFINQLR 193
>gi|377555585|ref|ZP_09785313.1| recombinase A [endosymbiont of Bathymodiolus sp.]
Length = 341
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 142/194 (73%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK AL++AL+Q+ FGK S++ L + +STGSL LD+ALGIGGLP+GR++E
Sbjct: 4 QKKQALKVALTQIDKQFGKGSVMFLGDAGANTDIEAVSTGSLSLDIALGIGGLPRGRVIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ +G++ + LLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIAEMQKLGGTAAFIDAEHALDPQYAKRLGVNTDELLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG +D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGGVDIVVVDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 245 QSHTLIIFLNQVKV 258
+++T++IF+NQ+++
Sbjct: 184 KTNTMVIFINQLRM 197
>gi|198385765|gb|ACH86226.1| RecA [Ensifer sp. T173]
Length = 193
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 136/193 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGGKDSIIEIETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAIDVLVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLN 254
S+ +S+ ++IF+
Sbjct: 181 SISKSNCMVIFIT 193
>gi|371782147|emb|CCE46140.1| recombinase A, partial [Rhizobium skierniewicense]
Length = 290
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 135/189 (71%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
L ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EIYG E
Sbjct: 1 LEAALSQIERSFGKGSIMKLGSNESIVEVETVSTGSLSLDVALGIGGLPKGRIIEIYGPE 60
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D NLLI+QPD+ E L +
Sbjct: 61 SSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLHNLLISQPDTGEQALEI 120
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S T+
Sbjct: 121 TDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKTM 180
Query: 250 IIFLNQVKV 258
+IF+NQ+++
Sbjct: 181 VIFINQIRM 189
>gi|422594039|ref|ZP_16668331.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M301315]
gi|330984348|gb|EGH82451.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 468
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 141/196 (71%), Gaps = 5/196 (2%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRI 122
QK AL AL+Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 QKKAALATALTQIEKQFGKGAVM---RMGDQERMAIPAISTGSLNLDIALGIGGLPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL+AQPD+
Sbjct: 62 VEIYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAAKLGVNVDDLLVAQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SGS+DV++VDSVAAL+PK EI + M+ Q+R+M+QALRKI +
Sbjct: 122 GEQALEITDMLVRSGSVDVLIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 181
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++ L+IF+NQ+++
Sbjct: 182 IKNANCLVIFINQIRM 197
>gi|221639883|ref|YP_002526145.1| recombinase A [Rhodobacter sphaeroides KD131]
gi|221160664|gb|ACM01644.1| Protein recA [Rhodobacter sphaeroides KD131]
Length = 367
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 144/200 (72%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL AL+Q+ FGK S++ L PV+ STGSL LD+ALGIGGLP
Sbjct: 25 MDKAKALESALAQIERQFGKGSIMKL-----GANSPVMEIEATSTGSLGLDIALGIGGLP 79
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 80 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 139
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 140 QPDTGEQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 199
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 200 LTASIGRSNCMVIFINQIRM 219
>gi|406367576|gb|AFS44230.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367580|gb|AFS44232.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367584|gb|AFS44234.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367586|gb|AFS44235.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367588|gb|AFS44236.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367590|gb|AFS44237.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367594|gb|AFS44239.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367596|gb|AFS44240.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367628|gb|AFS44256.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367630|gb|AFS44257.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367632|gb|AFS44258.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367636|gb|AFS44260.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367638|gb|AFS44261.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367640|gb|AFS44262.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367642|gb|AFS44263.1| recombinase A, partial [Bradyrhizobium elkanii]
gi|406367644|gb|AFS44264.1| recombinase A, partial [Bradyrhizobium elkanii]
Length = 190
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 136/189 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGR+V
Sbjct: 2 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDIALGVGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIF 252
+SHT++IF
Sbjct: 182 NKSHTMVIF 190
>gi|319408737|emb|CBI82394.1| RecA protein [Bartonella schoenbuchensis R1]
Length = 347
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALDSALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+ E+LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGVCAFVDAEHALDPIYARKLGVKLEDLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG+IDV+VVDSVAAL P+ EI +N Q+R+M++ALRK+ S+
Sbjct: 121 EQALEIAETLVRSGAIDVLVVDSVAALTPRAEIDGEMNDSVPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|328543179|ref|YP_004303288.1| recombinase A [Polymorphum gilvum SL003B-26A1]
gi|326412925|gb|ADZ69988.1| recombinase A [Polymorphum gilvum SL003B-26A1]
Length = 344
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 142/195 (72%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLP+GRIV
Sbjct: 1 MDKTKALDAALSQIERAFGKGSIMRLGQGQAVEV-QTVSTGSLGLDIALGVGGLPRGRIV 59
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQKLGG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 60 EIYGPESSGKTTLALHTIAEAQKLGGICAFIDAEHALDPVYARKLGVNIDDLLISQPDAG 119
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+I+V+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+
Sbjct: 120 EQALEIADTLVRSGAIEVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASI 179
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 180 SKSNCMVIFINQIRM 194
>gi|260752406|ref|YP_003225299.1| recombinase A [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258551769|gb|ACV74715.1| recA protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 354
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 143/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 16 MDKQKALEAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ ++L+++QP
Sbjct: 72 RIVEIYGHESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++VVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 132 DTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 191
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S TL+IF+NQV++
Sbjct: 192 GSINRSQTLVIFINQVRM 209
>gi|406919471|gb|EKD57755.1| hypothetical protein ACD_57C00159G0005 [uncultured bacterium]
Length = 359
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 145/196 (73%), Gaps = 7/196 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
QK A++LA+ Q+ +GK S++ L G R+ +I TGS+ LDLALG+GGLP+GR
Sbjct: 21 QKLQAIKLAMEQIEKQYGKGSIMKL----GDRQSVKVDIIPTGSIALDLALGVGGLPRGR 76
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG EASGKTTLALHV+ EAQK GG A++D E+ALDP+ AE +G++ ++LL++QPD
Sbjct: 77 IVEIYGPEASGKTTLALHVVAEAQKRGGQAAFIDAEHALDPARAETIGVNLDDLLMSQPD 136
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
S E L + +TL +SG++DVIVVDSVAAL+P+ E+ + Q+R+M+QALRK+
Sbjct: 137 SGEQALEITETLIRSGAVDVIVVDSVAALVPRAELEGEMGDAVMGMQARLMSQALRKLTG 196
Query: 242 SLCQSHTLIIFLNQVK 257
++ +S T++IF NQ++
Sbjct: 197 AISKSKTILIFTNQLR 212
>gi|283481767|emb|CBA10138.1| recombinase A [Agrobacterium tumefaciens]
Length = 317
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 135/191 (70%)
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEIYG
Sbjct: 2 KALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEIYG 61
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E L
Sbjct: 62 PESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQAL 121
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S
Sbjct: 122 EITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSK 181
Query: 248 TLIIFLNQVKV 258
++IF+NQ+++
Sbjct: 182 CMVIFINQIRM 192
>gi|207366350|emb|CAQ58070.1| recombinase A [Agrobacterium tumefaciens]
Length = 316
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 135/191 (70%)
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEIYG
Sbjct: 1 KALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEIYG 60
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E L
Sbjct: 61 PESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQAL 120
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S
Sbjct: 121 EITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSK 180
Query: 248 TLIIFLNQVKV 258
++IF+NQ+++
Sbjct: 181 CMVIFINQIRM 191
>gi|310658983|ref|YP_003936704.1| DNA strand exchange and recombination protein with protease and
nuclease activity [[Clostridium] sticklandii]
gi|308825761|emb|CBH21799.1| DNA strand exchange and recombination protein with protease and
nuclease activity [[Clostridium] sticklandii]
Length = 350
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 147/199 (73%), Gaps = 1/199 (0%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ ++ +K AL A++++ DFGK S+++L ISTGS+ LD+A+GIGGLP
Sbjct: 2 DEKRMEEKRKALDAAIAKIEKDFGKGSIMTLGEN-AKMNIETISTGSIGLDVAIGIGGLP 60
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTT+ALH + EAQKLGG A++D E+ALDP A+A+G+D + L+++
Sbjct: 61 KGRIVEIYGPESSGKTTVALHAVAEAQKLGGIAAFVDAEHALDPVYAKALGVDIDKLIVS 120
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + ++L +SG+ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 121 QPDTGEQALEITESLVRSGAIDIIVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRK 180
Query: 239 IHYSLCQSHTLIIFLNQVK 257
+ S+ +S T+ IF+NQ++
Sbjct: 181 LAGSINKSKTITIFINQLR 199
>gi|417636|sp|P32725.1|RECA_RHOS4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|288349|emb|CAA51258.1| recA [Rhodobacter sphaeroides]
Length = 343
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 144/200 (72%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL AL+Q+ FGK S++ L PV+ STGSL LD+ALGIGGLP
Sbjct: 1 MDKAKALESALAQIERQFGKGSIMKL-----GANSPVMEIEATSTGSLGLDIALGIGGLP 55
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 56 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 115
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 116 QPDTGEQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 175
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 176 LTASIGRSNCMVIFINQIRM 195
>gi|331000526|ref|ZP_08324197.1| RecA protein [Parasutterella excrementihominis YIT 11859]
gi|329571290|gb|EGG52979.1| RecA protein [Parasutterella excrementihominis YIT 11859]
Length = 367
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 146/195 (74%), Gaps = 7/195 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
+ AL++AL Q++ FGK+++LS+ GS+ V+STGS LDLALG+GGLP+GRI
Sbjct: 20 RKKALKMALDQISKQFGKDAILSM----GSQPDQNLDVVSTGSFTLDLALGVGGLPRGRI 75
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL LH++ E QKLGG CA++D E+ALD A+A+G+ ++LL++QPDS
Sbjct: 76 VEIYGPESSGKTTLTLHILAEMQKLGGTCAFIDAEHALDVKYAKALGVKVDDLLLSQPDS 135
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S
Sbjct: 136 GEQALEITDALVRSGAVDLVVIDSVAALVPRSEIEGDMGEALPGLQARLMSQALRKLTSS 195
Query: 243 LCQSHTLIIFLNQVK 257
+ +S+TL++F+NQV+
Sbjct: 196 IKKSNTLVVFINQVR 210
>gi|220925348|ref|YP_002500650.1| recA protein [Methylobacterium nodulans ORS 2060]
gi|254790438|sp|B8IP29.1|RECA_METNO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|219949955|gb|ACL60347.1| recA protein [Methylobacterium nodulans ORS 2060]
Length = 363
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALAQIERAFGKGSIMRLGKGDKVQEVETISTGSLGLDIALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDQQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 198 SNCMVIFINQIRM 210
>gi|303256569|ref|ZP_07342583.1| protein RecA [Burkholderiales bacterium 1_1_47]
gi|302860060|gb|EFL83137.1| protein RecA [Burkholderiales bacterium 1_1_47]
Length = 353
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 146/195 (74%), Gaps = 7/195 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
+ AL++AL Q++ FGK+++LS+ GS+ V+STGS LDLALG+GGLP+GRI
Sbjct: 6 RKKALKMALDQISKQFGKDAILSM----GSQPDQNLDVVSTGSFTLDLALGVGGLPRGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL LH++ E QKLGG CA++D E+ALD A+A+G+ ++LL++QPDS
Sbjct: 62 VEIYGPESSGKTTLTLHILAEMQKLGGTCAFIDAEHALDVKYAKALGVKVDDLLLSQPDS 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S
Sbjct: 122 GEQALEITDALVRSGAVDLVVIDSVAALVPRSEIEGDMGEALPGLQARLMSQALRKLTSS 181
Query: 243 LCQSHTLIIFLNQVK 257
+ +S+TL++F+NQV+
Sbjct: 182 IKKSNTLVVFINQVR 196
>gi|254427618|ref|ZP_05041325.1| protein RecA [Alcanivorax sp. DG881]
gi|196193787|gb|EDX88746.1| protein RecA [Alcanivorax sp. DG881]
Length = 344
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 143/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ + G R R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 4 KGKALSAALSQIERQFGKGSVMRM----GDRKRERMPSISTGSLGLDVALGIGGLPKGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP AE +G++ ++L+++QPD+
Sbjct: 60 VEIYGPESSGKTTLTLSVIAQAQKKGATCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL+PK EI + + Q+R+M+QALRKI +
Sbjct: 120 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGN 179
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++TL++F+NQ+++
Sbjct: 180 VKNANTLVVFINQIRM 195
>gi|77464021|ref|YP_353525.1| recombinase A [Rhodobacter sphaeroides 2.4.1]
gi|126462866|ref|YP_001043980.1| recombinase A [Rhodobacter sphaeroides ATCC 17029]
gi|332558895|ref|ZP_08413217.1| recombinase A [Rhodobacter sphaeroides WS8N]
gi|429209616|ref|ZP_19200846.1| RecA protein [Rhodobacter sp. AKP1]
gi|166220670|sp|A3PLJ2.1|RECA_RHOS1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|77388439|gb|ABA79624.1| Recombinase A, DNA recombination protein [Rhodobacter sphaeroides
2.4.1]
gi|126104530|gb|ABN77208.1| recA protein [Rhodobacter sphaeroides ATCC 17029]
gi|332276607|gb|EGJ21922.1| recombinase A [Rhodobacter sphaeroides WS8N]
gi|428187498|gb|EKX56080.1| RecA protein [Rhodobacter sp. AKP1]
Length = 357
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 144/200 (72%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL AL+Q+ FGK S++ L PV+ STGSL LD+ALGIGGLP
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKL-----GANSPVMEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 70 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTASIGRSNCMVIFINQIRM 209
>gi|170738641|ref|YP_001767296.1| recA protein [Methylobacterium sp. 4-46]
gi|238688062|sp|B0UGP0.1|RECA_METS4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|168192915|gb|ACA14862.1| recA protein [Methylobacterium sp. 4-46]
Length = 363
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALAQIERAFGKGSIMRLGKGDKVQEVETISTGSLGLDVALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDQQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 198 SNCMVIFINQIRM 210
>gi|170748646|ref|YP_001754906.1| recA protein [Methylobacterium radiotolerans JCM 2831]
gi|238688878|sp|B1LWT6.1|RECA_METRJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|170655168|gb|ACB24223.1| recA protein [Methylobacterium radiotolerans JCM 2831]
Length = 363
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ ALSQ+ FGK S++ L + + +STGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALSQIERAFGKGSIMRLGKSDKVQEVETVSTGSLGLDIALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 198 SNCMVIFINQIRM 210
>gi|444299296|emb|CCP29597.1| recombinase A, partial [Agrobacterium rubi]
Length = 284
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 134/186 (72%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGRI+EIYG E+SG
Sbjct: 3 ALSQIERSFGKGSIMKLGSNESIVEVETISTGSLSLDVALGIGGLPKGRIIEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLAL I EAQK GG CA++D E+ALDP A +G+D NLLI+QPD+ E L + DT
Sbjct: 63 KTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLHNLLISQPDTGEQALEITDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S T++IF
Sbjct: 123 LVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKTMVIF 182
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 183 INQIRM 188
>gi|16125339|ref|NP_419903.1| recombinase A [Caulobacter crescentus CB15]
gi|221234078|ref|YP_002516514.1| recombinase A [Caulobacter crescentus NA1000]
gi|20178056|sp|Q9A9A7.1|RECA_CAUCR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|254790426|sp|B8H3I7.1|RECA_CAUCN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|13422391|gb|AAK23071.1| recA protein [Caulobacter crescentus CB15]
gi|220963250|gb|ACL94606.1| RecA protein [Caulobacter crescentus NA1000]
Length = 356
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 142/196 (72%), Gaps = 9/196 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V +STGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEIESVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ +NLL++QPD
Sbjct: 72 IVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVK 257
S+ +++T++IF+NQ++
Sbjct: 192 SINKANTIVIFINQIR 207
>gi|410942845|ref|ZP_11374586.1| recombinase A [Gluconobacter frateurii NBRC 101659]
Length = 344
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ + LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDELLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL+IFLNQ+++
Sbjct: 177 GTVARSNTLVIFLNQIRM 194
>gi|188586099|ref|YP_001917644.1| recombinase A [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350786|gb|ACB85056.1| RecA protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 364
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 140/194 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K AL +ALSQ+ FGK S++ L VI TG+L LD+ALGIGGLP+GR+V
Sbjct: 1 MEKQKALDMALSQIEKQFGKGSIMKLGESNAKMNVEVIPTGALSLDIALGIGGLPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + EAQK GG A++D E+ALDP+ A +G++ + LL++QPD+
Sbjct: 61 EVYGPESSGKTTVALHAVAEAQKNGGNAAFIDAEHALDPAYARNLGVNIDELLVSQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + ++L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIAESLVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGSI 180
Query: 244 CQSHTLIIFLNQVK 257
+S T +F+NQ++
Sbjct: 181 RKSRTTAVFINQIR 194
>gi|256371456|ref|YP_003109280.1| recA protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256008040|gb|ACU53607.1| recA protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 346
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 141/199 (70%), Gaps = 11/199 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP-----VISTGSLKLDLALGIGGLP 118
M +D AL A++Q+ FGK S++ + P I TG++ LDLALG+GGLP
Sbjct: 1 MDRDKALETAIAQIEKQFGKGSIMRMGEH------PEMAIESIPTGAMALDLALGVGGLP 54
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGK+TLALHV+ EAQ+ GG CAY+D E+ALDP A+A+G+D + LLI+
Sbjct: 55 RGRIVEIYGPESSGKSTLALHVVAEAQRQGGRCAYIDAEHALDPVYAQAIGVDVDQLLIS 114
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + D L +SGSIDV++VDSVAAL PK EI I + Q+R+M+QALRK
Sbjct: 115 QPDYGEQALEIADLLIRSGSIDVVIVDSVAALTPKAEIEGDIGDSHVGLQARLMSQALRK 174
Query: 239 IHYSLCQSHTLIIFLNQVK 257
+ +L +++TL +F+NQ++
Sbjct: 175 LTANLSKTNTLAVFINQLR 193
>gi|221632222|ref|YP_002521443.1| recA protein [Thermomicrobium roseum DSM 5159]
gi|221156923|gb|ACM06050.1| recA protein [Thermomicrobium roseum DSM 5159]
Length = 354
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M + AL LA+SQ+ FGK +++ + + VI TG++ LDLALG+GG+P+GRI
Sbjct: 1 MDRQKALELAISQIERSFGKGAIMRMGEDPSKLQVDVIPTGAIALDLALGVGGIPRGRIT 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALHVI +AQ++GG AY+D E+A DP AE +G+D +NLLI+QPD+
Sbjct: 61 EIFGPESSGKTTLALHVIAQAQRMGGIAAYIDAEHAFDPVYAERLGVDLDNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S T +IF+NQ+++
Sbjct: 181 SRSKTAVIFINQLRM 195
>gi|418054896|ref|ZP_12692951.1| Protein recA [Hyphomicrobium denitrificans 1NES1]
gi|353210478|gb|EHB75879.1| Protein recA [Hyphomicrobium denitrificans 1NES1]
Length = 377
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 141/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ +FGK S++ L G+ I TGSL LD+ALGIGGLPKG
Sbjct: 14 MDKKQALEHALQQIDKNFGKGSIMRL----GANEKVDIEAIPTGSLGLDIALGIGGLPKG 69
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTLALHV+ EAQK GG CA++D E+A+DP A+ +G+ E+LLI+QP
Sbjct: 70 RIIEIYGPESSGKTTLALHVVAEAQKRGGICAFVDAEHAIDPGYAKKLGVKVEDLLISQP 129
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL PK E+ + Q+R+M+QALRK+
Sbjct: 130 DTGEQALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLT 189
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 190 GSISKSKCMVIFINQIRM 207
>gi|146278408|ref|YP_001168567.1| recombinase A [Rhodobacter sphaeroides ATCC 17025]
gi|166220671|sp|A4WV48.1|RECA_RHOS5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|145556649|gb|ABP71262.1| recA protein [Rhodobacter sphaeroides ATCC 17025]
Length = 357
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 144/200 (72%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL AL+Q+ FGK S++ L PV+ STGSL LD+ALGIGGLP
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKL-----GANSPVMEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP+ A+ +G++ + LLI+
Sbjct: 70 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPAYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ +IVVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVSLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTASIGRSNCMVIFINQIRM 209
>gi|357384882|ref|YP_004899606.1| recombinase A [Pelagibacterium halotolerans B2]
gi|351593519|gb|AEQ51856.1| RecA protein [Pelagibacterium halotolerans B2]
Length = 357
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M K+ AL AL Q+ +FGK S++ L ISTGSL LD+ALGIGGLP+
Sbjct: 10 DGGSMDKNKALEAALGQIERNFGKGSIMKLGENT-QVNVESISTGSLGLDIALGIGGLPR 68
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E++G E+SGKTTLALHV+ EAQK GG CA++D E+ALDP+ A +G++ ++LLI+Q
Sbjct: 69 GRIIEVFGPESSGKTTLALHVLAEAQKSGGICAFIDAEHALDPTYARKLGVNIDDLLISQ 128
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+IDV+VVDSVAAL P+ E+ + Q+R+M+QA+RK+
Sbjct: 129 PDAGEQALEIADTLVRSGAIDVLVVDSVAALTPRAELEGEMGDSLPGLQARLMSQAMRKL 188
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 189 TASISKSKAMVIFINQIRM 207
>gi|146424975|emb|CAM12596.1| recombinase A [Ochrobactrum anthropi]
Length = 299
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 137/191 (71%), Gaps = 10/191 (5%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLPKGRIVEIYG 127
ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 3 ALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLPKGRIVEIYG 57
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLALH I EAQ GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 58 PESSGKTTLALHTIAEAQXKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQAL 117
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 118 EITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSN 177
Query: 248 TLIIFLNQVKV 258
++IF+NQ+++
Sbjct: 178 CMVIFINQIRM 188
>gi|357975507|ref|ZP_09139478.1| recombinase A [Sphingomonas sp. KC8]
Length = 357
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLP+G
Sbjct: 17 MDRQKALEAALAQIDRAFGKGSAMKL----GSREKIEIESISTGSLGLDIALGIGGLPRG 72
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVE++G E+SGKTTLALHVI EAQK GG A++D E+ALDP A +G+D + L+++QP
Sbjct: 73 RIVEVFGPESSGKTTLALHVIAEAQKAGGTAAFVDAEHALDPVYARKLGVDIDELIVSQP 132
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S +IDV+V+DSVAAL+P+ EI + + Q+R+M+QALRKI
Sbjct: 133 DTGEQALEITDTLIRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKIT 192
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S TL+IF+NQ+++
Sbjct: 193 GSISRSRTLVIFINQIRM 210
>gi|240850807|ref|YP_002972207.1| recombinase A [Bartonella grahamii as4aup]
gi|240267930|gb|ACS51518.1| recombinase A [Bartonella grahamii as4aup]
Length = 347
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTAAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ +++F+NQ+++
Sbjct: 181 FRSNCMVVFINQIRM 195
>gi|218325541|emb|CAV24649.1| recombinase A [Agrobacterium tumefaciens]
Length = 323
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 137/197 (69%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDXSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 181 SISKSKCMVIFINQIRM 197
>gi|395779782|ref|ZP_10460251.1| protein recA [Bartonella washoensis 085-0475]
gi|395420157|gb|EJF86442.1| protein recA [Bartonella washoensis 085-0475]
Length = 347
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTSAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ +++F+NQ+++
Sbjct: 181 FRSNCMVVFINQIRM 195
>gi|414341531|ref|YP_006983052.1| recombinase A [Gluconobacter oxydans H24]
gi|411026866|gb|AFW00121.1| RecA [Gluconobacter oxydans H24]
Length = 344
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ + LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDELLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL+IFLNQ+++
Sbjct: 177 GTVSRSNTLVIFLNQIRM 194
>gi|307945635|ref|ZP_07660971.1| protein RecA [Roseibium sp. TrichSKD4]
gi|307771508|gb|EFO30733.1| protein RecA [Roseibium sp. TrichSKD4]
Length = 355
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 141/195 (72%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ + + V STGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKTKALDAALSQIERAFGKGSIMRMGQGQAVEVQSV-STGSLGLDIALGIGGLPKGRIV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLALHTVAEAQKTGGICAFVDAEHALDPIYARKLGVNIDDLLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGMQARLMSQALRKLTASI 192
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 193 SKSNCMVIFINQIRM 207
>gi|54294688|ref|YP_127103.1| recombinase A [Legionella pneumophila str. Lens]
gi|59798134|sp|Q5WVQ0.1|RECA_LEGPL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|53754520|emb|CAH16004.1| RecA protein [Legionella pneumophila str. Lens]
Length = 348
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G+ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DV+++DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|296132793|ref|YP_003640040.1| recA protein [Thermincola potens JR]
gi|296031371|gb|ADG82139.1| recA protein [Thermincola potens JR]
Length = 343
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 139/192 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG+L LD+ALG+GG+P+GR+VEI
Sbjct: 4 KLKALDMALSQIEKQFGKGSIMKLGEASAKMNIEVIPTGALALDVALGVGGVPRGRVVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQKLGG A++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTVALHIIAEAQKLGGTAAFIDAEHALDPYYARKLGVDIDNLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDVIVVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIAEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAISK 183
Query: 246 SHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 184 SRTTAIFINQIR 195
>gi|52842028|ref|YP_095827.1| recombinase A [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|54297714|ref|YP_124083.1| recombinase A [Legionella pneumophila str. Paris]
gi|148359347|ref|YP_001250554.1| DNA recombination protein RecA [Legionella pneumophila str. Corby]
gi|296107394|ref|YP_003619094.1| recombination protein RecA [Legionella pneumophila 2300/99 Alcoy]
gi|378777663|ref|YP_005186101.1| recombinase A [Legionella pneumophila subsp. pneumophila ATCC
43290]
gi|397664255|ref|YP_006505793.1| DNA strand exchange and recombination protein [Legionella
pneumophila subsp. pneumophila]
gi|397667528|ref|YP_006509065.1| DNA strand exchange and recombination protein [Legionella
pneumophila subsp. pneumophila]
gi|59798138|sp|Q5X4B5.1|RECA_LEGPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|59798152|sp|Q5ZUJ7.1|RECA_LEGPH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220654|sp|A5ICV8.1|RECA_LEGPC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|13186174|emb|CAC33484.1| RecA protein [Legionella pneumophila]
gi|52629139|gb|AAU27880.1| RecA bacterial DNA recombination protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53751499|emb|CAH12917.1| RecA protein [Legionella pneumophila str. Paris]
gi|148281120|gb|ABQ55208.1| RecA bacterial DNA recombination protein [Legionella pneumophila
str. Corby]
gi|165968102|gb|ABY75873.1| RecA protein [Legionella pneumophila 2300/99 Alcoy]
gi|295649295|gb|ADG25142.1| recombination protein RecA [Legionella pneumophila 2300/99 Alcoy]
gi|307610503|emb|CBX00085.1| RecA protein [Legionella pneumophila 130b]
gi|364508478|gb|AEW52002.1| RecA bacterial DNA recombination protein [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|395127666|emb|CCD05865.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Legionella pneumophila subsp.
pneumophila]
gi|395130939|emb|CCD09188.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Legionella pneumophila subsp.
pneumophila]
Length = 348
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G+ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DV+++DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|453328282|dbj|GAC89411.1| DNA recombinase RecA [Gluconobacter thailandicus NBRC 3255]
Length = 344
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ + LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDELLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL+IFLNQ+++
Sbjct: 177 GTVSRSNTLVIFLNQIRM 194
>gi|326387207|ref|ZP_08208817.1| recombinase A [Novosphingobium nitrogenifigens DSM 19370]
gi|326208388|gb|EGD59195.1| recombinase A [Novosphingobium nitrogenifigens DSM 19370]
Length = 356
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 145/197 (73%), Gaps = 1/197 (0%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K M + AL AL+Q+ FGK S++ L + + + IS+GSL LD+ALGIGGLP+GR
Sbjct: 14 KEMDRQKALDAALAQIDRAFGKGSVMKLGQKE-TMQIEAISSGSLGLDIALGIGGLPRGR 72
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G+D +NL+++QPD
Sbjct: 73 IVEIYGPESSGKTTLALHVIAEAQKAGGTAAFVDAEHALDPVYAKKLGVDIDNLIVSQPD 132
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 133 TGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTG 192
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S L+IF+NQV++
Sbjct: 193 SISRSRCLVIFINQVRM 209
>gi|354951767|emb|CBL81077.2| recombinase A, partial [Agrobacterium sp. NCPPB 1650]
Length = 298
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 140/197 (71%), Gaps = 5/197 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNESIVEVETISTGSLSLDVALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLHNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEI----GVPINGMYSDAQSRIMTQALRKIHY 241
L + DTL +SG++DV+V+DSVAAL P+ EI G + G+ + +R+M+QALRK+
Sbjct: 121 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARL-ARLMSQALRKLTA 179
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 180 SISKSKTMVIFINQIRM 196
>gi|300113490|ref|YP_003760065.1| recA protein [Nitrosococcus watsonii C-113]
gi|299539427|gb|ADJ27744.1| recA protein [Nitrosococcus watsonii C-113]
Length = 342
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK +++ L R VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 RKKALGAALSQIEKQFGKGAVMRLGDASIVREVEVISTGSLGLDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G EASGKTTLAL V EAQ LGG A++D E+ALDP AE +G++ E+LL++QPD+ E
Sbjct: 65 FGPEASGKTTLALQVAAEAQALGGTAAFVDAEHALDPQYAERLGVNVEDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|121536015|ref|ZP_01667805.1| recA protein [Thermosinus carboxydivorans Nor1]
gi|121305405|gb|EAX46357.1| recA protein [Thermosinus carboxydivorans Nor1]
Length = 345
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL A+ Q+ +FGK S++ L VI TG L LD+ALG+GG+P+GR+V
Sbjct: 1 MDKLKALENAMRQIEKEFGKGSIMRLGEAAAKMNVEVIPTGCLALDIALGVGGIPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH+I +AQK+GG A++D E+ALDP A+ +G+D ENLLI+QPD+
Sbjct: 61 EIYGHESSGKTTVALHMIAQAQKMGGIAAFIDAEHALDPIYAKKLGVDTENLLISQPDNG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG+ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 EQALEIADALVRSGAIDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGII 180
Query: 244 CQSHTLIIFLNQVK 257
+S T IF+NQ++
Sbjct: 181 SKSRTTAIFINQIR 194
>gi|207366352|emb|CAQ58071.1| recombinase A [Agrobacterium tumefaciens]
Length = 322
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 135/190 (71%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EIYG
Sbjct: 2 ALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIIEIYGP 61
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E L
Sbjct: 62 ESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQALE 121
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S
Sbjct: 122 ITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKC 181
Query: 249 LIIFLNQVKV 258
++IF+NQ+++
Sbjct: 182 MVIFINQIRM 191
>gi|406367606|gb|AFS44245.1| recombinase A, partial [Bradyrhizobium genosp. SA-3]
gi|406367608|gb|AFS44246.1| recombinase A, partial [Bradyrhizobium genosp. SA-3]
gi|406367616|gb|AFS44250.1| recombinase A, partial [Bradyrhizobium genosp. SA-3]
Length = 190
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 137/189 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKSDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIF 252
+S+T++IF
Sbjct: 182 NKSNTMVIF 190
>gi|338814546|ref|ZP_08626560.1| recA protein [Acetonema longum DSM 6540]
gi|337273482|gb|EGO62105.1| recA protein [Acetonema longum DSM 6540]
Length = 348
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 137/194 (70%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL A+ Q+ DFGK S++ L VI TG++ LD+ALG+GG+P+GR++
Sbjct: 1 MDKIKALESAMRQIEKDFGKGSIMKLGEAAAKMNVEVIPTGAISLDVALGVGGVPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALHVI EAQK GG A++D E+ALDP A+ +G+D +NLLI+QPD
Sbjct: 61 EIYGPESSGKTTVALHVIAEAQKKGGIAAFIDAEHALDPVYAKKLGVDIDNLLISQPDHG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 EQALEIADALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGII 180
Query: 244 CQSHTLIIFLNQVK 257
+S T IF+NQ++
Sbjct: 181 SKSRTTAIFINQIR 194
>gi|212726671|gb|AAM50050.2| recombinase A [Zymomonas mobilis subsp. mobilis]
Length = 354
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 143/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 16 MDKQKALEAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ ++L+++QP
Sbjct: 72 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++VVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 132 DTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 191
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S TL+IF+NQV++
Sbjct: 192 GSINRSQTLVIFINQVRM 209
>gi|90020935|ref|YP_526762.1| recombinase A [Saccharophagus degradans 2-40]
gi|123277374|sp|Q21L79.1|RECA_SACD2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|89950535|gb|ABD80550.1| recA protein [Saccharophagus degradans 2-40]
Length = 348
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L G + P ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALEAALSQIDRQFGKGTVMRLGDK-GREKMPAISTGSLGLDVALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI EAQ+ GG CA++D E+ALDP AE +G++ ++L+I+QPD+ E
Sbjct: 64 YGPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L V D L +SG++DV+VVDSVAAL PK EI + + Q+R+M+QALRKI ++
Sbjct: 124 ALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNIKN 183
Query: 246 SHTLIIFLNQVKV 258
++ L IF+NQ+++
Sbjct: 184 ANCLAIFINQIRM 196
>gi|423712844|ref|ZP_17687142.1| protein recA [Bartonella washoensis Sb944nv]
gi|395410540|gb|EJF77094.1| protein recA [Bartonella washoensis Sb944nv]
Length = 347
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKSGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ ++
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTSAI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ +++F+NQ+++
Sbjct: 181 FRSNCMVVFINQIRM 195
>gi|406367544|gb|AFS44214.1| recombinase A, partial [Bradyrhizobium genosp. SA-2]
gi|406367548|gb|AFS44216.1| recombinase A, partial [Bradyrhizobium genosp. SA-2]
gi|406367550|gb|AFS44217.1| recombinase A, partial [Bradyrhizobium yuanmingense]
gi|406367552|gb|AFS44218.1| recombinase A, partial [Bradyrhizobium yuanmingense]
gi|406367556|gb|AFS44220.1| recombinase A, partial [Bradyrhizobium yuanmingense]
gi|406367558|gb|AFS44221.1| recombinase A, partial [Bradyrhizobium yuanmingense]
gi|406367562|gb|AFS44223.1| recombinase A, partial [Bradyrhizobium genosp. SA-2]
gi|406367572|gb|AFS44228.1| recombinase A, partial [Bradyrhizobium genosp. SA-2]
gi|406367574|gb|AFS44229.1| recombinase A, partial [Bradyrhizobium yuanmingense]
gi|406367578|gb|AFS44231.1| recombinase A, partial [Bradyrhizobium yuanmingense]
gi|406367592|gb|AFS44238.1| recombinase A, partial [Bradyrhizobium sp. IAR18B]
gi|406367598|gb|AFS44241.1| recombinase A, partial [Bradyrhizobium yuanmingense]
gi|406367600|gb|AFS44242.1| recombinase A, partial [Bradyrhizobium genosp. TUXTLAS-23]
gi|406367604|gb|AFS44244.1| recombinase A, partial [Bradyrhizobium genosp. TUXTLAS-23]
gi|406367624|gb|AFS44254.1| recombinase A, partial [Bradyrhizobium genosp. SA-2]
gi|406367626|gb|AFS44255.1| recombinase A, partial [Bradyrhizobium genosp. SA-2]
Length = 190
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 137/189 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIF 252
+S+T++IF
Sbjct: 182 NKSNTMVIF 190
>gi|374261319|ref|ZP_09619903.1| RecA protein [Legionella drancourtii LLAP12]
gi|363538214|gb|EHL31624.1| RecA protein [Legionella drancourtii LLAP12]
Length = 348
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAALSQIERQFGKGSVMLMGDSSVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G++ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DVI++DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVIIIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|350998448|gb|AEQ37897.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998450|gb|AEQ37898.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998452|gb|AEQ37899.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998454|gb|AEQ37900.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998456|gb|AEQ37901.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998458|gb|AEQ37902.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998460|gb|AEQ37903.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998462|gb|AEQ37904.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998464|gb|AEQ37905.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998466|gb|AEQ37906.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998468|gb|AEQ37907.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998470|gb|AEQ37908.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998472|gb|AEQ37909.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998474|gb|AEQ37910.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998476|gb|AEQ37911.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998478|gb|AEQ37912.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998480|gb|AEQ37913.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998482|gb|AEQ37914.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998484|gb|AEQ37915.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998486|gb|AEQ37916.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998488|gb|AEQ37917.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998490|gb|AEQ37918.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998492|gb|AEQ37919.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998494|gb|AEQ37920.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998496|gb|AEQ37921.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998498|gb|AEQ37922.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998500|gb|AEQ37923.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998502|gb|AEQ37924.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998504|gb|AEQ37925.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
gi|350998506|gb|AEQ37926.1| recombinase A, partial [Rhizobium leguminosarum bv. viciae]
Length = 193
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 136/192 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 2 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 62 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 122 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 181
Query: 242 SLCQSHTLIIFL 253
S+ +S+T++IF+
Sbjct: 182 SISKSNTMVIFI 193
>gi|283856414|ref|YP_162901.2| recombinase A [Zymomonas mobilis subsp. mobilis ZM4]
gi|384411101|ref|YP_005620466.1| recA protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|397676052|ref|YP_006517590.1| protein recA [Zymomonas mobilis subsp. mobilis ATCC 29191]
gi|292495071|sp|Q9X5D8.3|RECA_ZYMMO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|283775414|gb|AAV89790.2| recA protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|335931475|gb|AEH62015.1| recA protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|395396741|gb|AFN56068.1| Protein recA [Zymomonas mobilis subsp. mobilis ATCC 29191]
Length = 354
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 143/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 16 MDKQKALEAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ ++L+++QP
Sbjct: 72 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++VVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 132 DTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 191
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S TL+IF+NQV++
Sbjct: 192 GSINRSQTLVIFINQVRM 209
>gi|197104451|ref|YP_002129828.1| recombinase A [Phenylobacterium zucineum HLK1]
gi|196477871|gb|ACG77399.1| recombinase A protein [Phenylobacterium zucineum HLK1]
Length = 361
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 142/199 (71%), Gaps = 10/199 (5%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLPK 119
+K AL AL+Q+ FGK S++ L +G ++ STGSL LD+ALGIGGLPK
Sbjct: 15 EKQRALEAALAQIDRAFGKGSVMKL-----GDKGKIVEIESVSTGSLGLDMALGIGGLPK 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVEIYG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ ++LL+AQ
Sbjct: 70 GRIVEIYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAHKLGVNLDDLLVAQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +S ++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 130 PDTGEQALEITDTLVRSNAVDVIVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ ++ TL+IF+NQ+++
Sbjct: 190 TASISKAKTLVIFINQIRM 208
>gi|348549363|gb|AEP69199.1| recombinase A [Rhizobium etli bv. mimosae]
Length = 195
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 137/194 (70%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPK
Sbjct: 2 EXKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPK 61
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+Q
Sbjct: 62 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 121
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 122 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 181
Query: 240 HYSLCQSHTLIIFL 253
S+ +S+T++IF+
Sbjct: 182 TASISKSNTMVIFI 195
>gi|344943375|ref|ZP_08782662.1| Protein recA [Methylobacter tundripaludum SV96]
gi|344260662|gb|EGW20934.1| Protein recA [Methylobacter tundripaludum SV96]
Length = 345
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + SR V+STGSL LD+ALG GGLP+GR++EI
Sbjct: 5 KKKALGAALMQIEKQFGKGSVMRMGDVAASRDIDVVSTGSLGLDIALGCGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QKLGG A++D E+ALDPS AE +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFVDAEHALDPSYAEKIGVNVDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDVVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTGNIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|198385755|gb|ACH86221.1| RecA [Rhizobium sp. OR191]
Length = 192
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 135/192 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNESVVEIETVSTGSLGLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFL 253
S+ +S T++IF+
Sbjct: 181 SISKSKTMVIFI 192
>gi|260574638|ref|ZP_05842641.1| recA protein [Rhodobacter sp. SW2]
gi|259023055|gb|EEW26348.1| recA protein [Rhodobacter sp. SW2]
Length = 360
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLPKGRI+
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKLGANSPAMDIESTSTGSLGLDIALGIGGLPKGRII 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+QPD+
Sbjct: 75 EIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VDTL +SG++ ++V+DSVAAL+PK EI + M +Q+R+M+QA+RK+ S+
Sbjct: 135 EQALEIVDTLVRSGAVSLVVIDSVAALVPKSEIEGDMGDMQMGSQARLMSQAMRKLTASI 194
Query: 244 CQSHTLIIFLNQVKV 258
+S+ +++F+NQ+++
Sbjct: 195 GRSNCMVVFINQIRM 209
>gi|406367646|gb|AFS44265.1| recombinase A, partial [Bradyrhizobium japonicum]
gi|406367648|gb|AFS44266.1| recombinase A, partial [Bradyrhizobium japonicum]
Length = 190
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 137/189 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIF 252
+S+T++IF
Sbjct: 182 NKSNTMVIF 190
>gi|4768851|gb|AAD29645.1|AF124757_5 RecA protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 339
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 143/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L GSR IS+GSL LD+ALGIGGLP+G
Sbjct: 1 MDKQKALEAALAQIDRAFGKGSVMRL----GSREKIEIDTISSGSLGLDIALGIGGLPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ ++L+++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIVSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +S ++D++VVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 117 DTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKIT 176
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S TL+IF+NQV++
Sbjct: 177 GSINRSQTLVIFINQVRM 194
>gi|344924247|ref|ZP_08777708.1| recombination protein [Candidatus Odyssella thessalonicensis L13]
gi|297717870|gb|ADI50078.1| RecA protein [Candidatus Odyssella thessalonicensis L13]
Length = 349
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 143/195 (73%), Gaps = 7/195 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L G R +S+GSL LD+ALGIGG P+GRI
Sbjct: 6 KGKALDAALSQIERAFGKGSVMRL----GQRETVEIEALSSGSLGLDIALGIGGFPRGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTLALH + EAQK+GG CA++D E+ALDPS A +G++ +NL+I+QPD+
Sbjct: 62 IEIYGPESSGKTTLALHAVAEAQKVGGTCAFVDAEHALDPSYARKLGVNIDNLIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG+IDV++VDSVAAL+PK E+ + + Q+R+M+QALRK+ S
Sbjct: 122 GEQALEIADTLVRSGAIDVLIVDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKLAGS 181
Query: 243 LCQSHTLIIFLNQVK 257
+ +++ ++IF+NQ++
Sbjct: 182 INKTNCMVIFINQIR 196
>gi|407803080|ref|ZP_11149918.1| recA protein [Alcanivorax sp. W11-5]
gi|407022935|gb|EKE34684.1| recA protein [Alcanivorax sp. W11-5]
Length = 346
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 142/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ + G R+ P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KSKALSAALSQIERQFGKGSVMRM----GDRKREPMPAISTGSLGLDVALGIGGLPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI +AQK G CA++D E+ALDP AE +G++ ++L+++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLSVIAQAQKNGANCAFVDAEHALDPDYAEKLGVNVDDLIVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL+PK EI + + Q+R+M+QALRKI S
Sbjct: 121 GEQALEITDMLVRSGAVDVVIVDSVAALVPKAEIEGEMGDHHVGVQARLMSQALRKITGS 180
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++ L+IF+NQ+++
Sbjct: 181 VKNANCLVIFINQIRM 196
>gi|331007036|ref|ZP_08330270.1| RecA protein [gamma proteobacterium IMCC1989]
gi|330419163|gb|EGG93595.1| RecA protein [gamma proteobacterium IMCC1989]
Length = 377
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 141/196 (71%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
KD AL ALSQ+ FGK +++ + G + + P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 34 KDKALEAALSQIERQFGKGTVMRM----GDKELVKIPAISTGSLGLDIALGIGGLPKGRI 89
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
EIYG E+SGKTTL L VI EAQK GG CA++D E+ALDP AE +G++ ++L+I+QPD+
Sbjct: 90 AEIYGPESSGKTTLTLQVIAEAQKQGGTCAFIDAEHALDPVYAEKLGVNVDDLIISQPDT 149
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L +SG++DVIV+DSVAAL PK EI + + Q+R+M+QALRKI +
Sbjct: 150 GEQALEVADMLVRSGAVDVIVIDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGN 209
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++ L IF+NQ+++
Sbjct: 210 IKNANCLCIFINQIRM 225
>gi|78485933|ref|YP_391858.1| recA protein [Thiomicrospira crunogena XCL-2]
gi|123741557|sp|Q31F89.1|RECA_THICR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|78364219|gb|ABB42184.1| RecA protein [Thiomicrospira crunogena XCL-2]
Length = 347
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + R +STGSL LD+ALGIGGLP+GR+VEI
Sbjct: 5 KKKALEAALGQIEKQFGKGSIMRMGDKGAIRDIDSVSTGSLGLDVALGIGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QK+GG A++D E+ALDP AE +G+D +NLL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPIYAEKLGVDIDNLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D+L +SG++D+++VDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDSLVRSGAVDIVIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
++TL+IF+NQ+++
Sbjct: 185 TNTLVIFINQIRM 197
>gi|374281892|gb|AEZ04949.1| recombinase A, partial [Rhizobium phaseoli]
Length = 188
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 134/188 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFL 253
S+T++IF+
Sbjct: 181 SNTMVIFI 188
>gi|77164441|ref|YP_342966.1| DNA recombination protein RecA [Nitrosococcus oceani ATCC 19707]
gi|254433644|ref|ZP_05047152.1| protein RecA [Nitrosococcus oceani AFC27]
gi|76882755|gb|ABA57436.1| RecA protein [Nitrosococcus oceani ATCC 19707]
gi|207089977|gb|EDZ67248.1| protein RecA [Nitrosococcus oceani AFC27]
Length = 342
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK +++ L R VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 RKKALGAALSQIEKQFGKGAVMRLGDASIVREVEVISTGSLGLDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G EASGKTTLAL V EAQ LGG A++D E+ALDP AE +G+ E+LL++QPD+ E
Sbjct: 65 FGPEASGKTTLALQVAAEAQALGGTAAFVDAEHALDPQYAERLGVSVEDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|406929115|gb|EKD64789.1| hypothetical protein ACD_50C00306G0002, partial [uncultured
bacterium]
Length = 342
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 144/193 (74%), Gaps = 1/193 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK A+RLA+ Q+ +GK S++ L S + VI TG++ LDLALGIGGLP+GRIVE
Sbjct: 4 QKIQAIRLAMDQIEKQYGKGSIMKLGDKQ-SVKVDVIPTGAIALDLALGIGGLPRGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG EASGKTTLALHV+ EAQK GG A++D E+ALDP+ AE +G++ ++LL++QPDS E
Sbjct: 63 IYGPEASGKTTLALHVVAEAQKRGGQAAFIDAEHALDPARAETIGVNLDDLLLSQPDSGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + +TL +SG++DVIVVDSVAAL+P+ E+ + Q+R+M+QALRK+ ++
Sbjct: 123 QALEITETLIRSGALDVIVVDSVAALVPRAELEGEMGDAVMGLQARLMSQALRKLTGAIS 182
Query: 245 QSHTLIIFLNQVK 257
+S T++IF NQ++
Sbjct: 183 KSKTILIFTNQLR 195
>gi|298103534|emb|CBH19578.1| recombinase A [Mesorhizobium sp. CPS13]
Length = 189
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 135/187 (72%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
L ALSQ+ FGK S++ L +STGSL LD+ALG+GGLP+GRI+EIYG
Sbjct: 1 GLDAALSQIERAFGKGSIMRLGANEQVVEIGTVSTGSLGLDIALGVGGLPRGRIIEIYGP 60
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 61 ESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALE 120
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T
Sbjct: 121 ICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNT 180
Query: 249 LIIFLNQ 255
++IF+NQ
Sbjct: 181 MVIFINQ 187
>gi|395790914|ref|ZP_10470373.1| protein recA [Bartonella alsatica IBS 382]
gi|395409210|gb|EJF75809.1| protein recA [Bartonella alsatica IBS 382]
Length = 347
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 138/195 (70%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALLQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>gi|406979549|gb|EKE01311.1| hypothetical protein ACD_21C00162G0004 [uncultured bacterium]
Length = 338
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL ALSQ+ FGK S++ L ++ V+STGSL LD+ALG GGLP+GR+VEI
Sbjct: 5 RKKALAAALSQIDKQFGKGSVMLLGEHESTKDIQVVSTGSLGLDIALGTGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LHVI E QKLGG A++D E+ALDPS AE +G++ +LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLHVIAECQKLGGTAAFIDAEHALDPSYAEKLGVNINDLLISQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSNAVDMVVIDSVAALTPKAEIEGEMGDQHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|344199960|ref|YP_004784286.1| protein recA [Acidithiobacillus ferrivorans SS3]
gi|343775404|gb|AEM47960.1| Protein recA [Acidithiobacillus ferrivorans SS3]
Length = 348
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 139/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 QRSKALAAALSQIDKQFGKGAVMRLGDHNAIKDIAVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI Q GG A++D E+ALDPS A +G+D ENLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIASCQAAGGTAAFIDAEHALDPSYAHKLGVDLENLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIS 183
Query: 245 QSHTLIIFLNQVKV 258
+++TL+IF+NQ+++
Sbjct: 184 RTNTLVIFINQIRM 197
>gi|58039956|ref|YP_191920.1| recombinase A [Gluconobacter oxydans 621H]
gi|61252238|sp|P48289.2|RECA_GLUOX RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|58002370|gb|AAW61264.1| RecA protein [Gluconobacter oxydans 621H]
Length = 345
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 145/198 (73%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R VISTGS+ LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKVETNVISTGSIGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A++D E+ALDP A +G++ ++LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAFIDAEHALDPGYARKLGVNIDDLLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+TL+IFLNQ+++
Sbjct: 177 GTVSRSNTLVIFLNQIRM 194
>gi|388256999|ref|ZP_10134179.1| recombinase A [Cellvibrio sp. BR]
gi|387939203|gb|EIK45754.1| recombinase A [Cellvibrio sp. BR]
Length = 347
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 143/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL+ ALSQ+ FGK +++ + G + P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KEKALQAALSQIERQFGKGTVMRM----GDKEQVAIPAISTGSLGLDVALGIGGLPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL L VI EAQ++GG CA++D E+ALDP A +G++ E+L+I+QPD+
Sbjct: 61 IEIYGPESSGKTTLTLQVIAEAQRMGGTCAFIDAEHALDPIYASKLGVNVEDLIISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L +SG++DV+VVDSVAAL P+ EI + + Q+R+M+QALRKI +
Sbjct: 121 GEQALEVTDMLVRSGAVDVLVVDSVAALTPRAEIEGEMGDHHVGLQARLMSQALRKITGN 180
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++ L+IF+NQ+++
Sbjct: 181 IKNANCLVIFINQIRM 196
>gi|198385745|gb|ACH86216.1| RecA [Rhizobium sp. T1473]
Length = 188
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 134/188 (71%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
L ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EIYG E
Sbjct: 1 LEAALSQIERSFGKGSIMKLGSNESVVEIETVSTGSLGLDIALGIGGLPKGRIIEIYGPE 60
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L +
Sbjct: 61 SSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEI 120
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S T+
Sbjct: 121 TDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKTM 180
Query: 250 IIFLNQVK 257
+IF+N ++
Sbjct: 181 VIFINXIR 188
>gi|325651229|emb|CBY89436.1| RecA protein [Rhizobium leguminosarum]
Length = 187
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 134/186 (72%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+EIYG
Sbjct: 1 ALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEIYGP 60
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L
Sbjct: 61 ESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALE 120
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T
Sbjct: 121 ITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNT 180
Query: 249 LIIFLN 254
++IF+N
Sbjct: 181 MVIFIN 186
>gi|406367546|gb|AFS44215.1| recombinase A, partial [Bradyrhizobium genosp. TUXTLAS-15]
gi|406367614|gb|AFS44249.1| recombinase A, partial [Bradyrhizobium sp. ERR4]
gi|406367618|gb|AFS44251.1| recombinase A, partial [Bradyrhizobium sp. ERR10]
gi|406367634|gb|AFS44259.1| recombinase A, partial [Bradyrhizobium sp. SBR6]
Length = 190
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 137/189 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIF 252
+S+T++IF
Sbjct: 182 NKSNTMVIF 190
>gi|198385759|gb|ACH86223.1| RecA [Sinorhizobium medicae]
Length = 192
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 135/192 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERAFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFL 253
S+ +S+ ++IF+
Sbjct: 181 SISKSNCMVIFI 192
>gi|160933139|ref|ZP_02080528.1| hypothetical protein CLOLEP_01982 [Clostridium leptum DSM 753]
gi|156868213|gb|EDO61585.1| RecA protein [Clostridium leptum DSM 753]
Length = 391
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 145/206 (70%), Gaps = 1/206 (0%)
Query: 52 EFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLA 111
+F D ++ + K AL AL Q+ FGK +++ L + + I TGSL LDLA
Sbjct: 10 KFKDSGGNETMAVDKSKALETALGQIEKQFGKGAVMRLGQNE-AMHVDAIPTGSLSLDLA 68
Query: 112 LGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGID 171
LGIGGLP+GRIVEIYG E+SGKTTLALH I E QK GGY A++DVE+ALDP A A+G+D
Sbjct: 69 LGIGGLPRGRIVEIYGPESSGKTTLALHCIAEGQKSGGYAAFIDVEHALDPVYARALGVD 128
Query: 172 AENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRI 231
++LL++QPD+ E L + + L +SG+IDVIVVDSVAAL+P+ EI + + Q+R+
Sbjct: 129 VDSLLVSQPDTGEQALEITEALVRSGAIDVIVVDSVAALVPRAEIEGEMGDSHVGLQARL 188
Query: 232 MTQALRKIHYSLCQSHTLIIFLNQVK 257
M+QALRK+ ++ +S+ + IF+NQ++
Sbjct: 189 MSQALRKLAGAISKSNCVAIFINQLR 214
>gi|406367540|gb|AFS44212.1| recombinase A, partial [Bradyrhizobium genosp. ETH2]
gi|406367560|gb|AFS44222.1| recombinase A, partial [Bradyrhizobium genosp. ETH1]
gi|406367564|gb|AFS44224.1| recombinase A, partial [Bradyrhizobium sp. CSR10A]
gi|406367566|gb|AFS44225.1| recombinase A, partial [Bradyrhizobium genosp. ETH1]
gi|406367568|gb|AFS44226.1| recombinase A, partial [Bradyrhizobium genosp. ETH1]
gi|406367570|gb|AFS44227.1| recombinase A, partial [Bradyrhizobium genosp. ETH1]
gi|406367610|gb|AFS44247.1| recombinase A, partial [Bradyrhizobium genosp. ETH1]
gi|406367612|gb|AFS44248.1| recombinase A, partial [Bradyrhizobium genosp. ETH1]
gi|406367620|gb|AFS44252.1| recombinase A, partial [Bradyrhizobium genosp. ETH1]
Length = 190
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 137/189 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVMVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIF 252
+S+T++IF
Sbjct: 182 NKSNTMVIF 190
>gi|344344513|ref|ZP_08775375.1| Protein recA [Marichromatium purpuratum 984]
gi|343803920|gb|EGV21824.1| Protein recA [Marichromatium purpuratum 984]
Length = 344
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL AL+Q+ FGK S++ + R ISTGSL LD+ALGIGGLPKGR+VEI
Sbjct: 5 RKKALAAALTQIEKQFGKGSVMRMGDAGAVRNIEAISTGSLGLDIALGIGGLPKGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LHV+ E QKLGG A++D E+ALDP AE +G+ E+LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHVVAEVQKLGGTAAFVDAEHALDPVYAEKLGVQMEDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DV++VDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+ L++F+NQ+++
Sbjct: 185 SNCLVVFINQIRM 197
>gi|421957940|gb|AFX72847.1| recombinase A, partial [Rhizobium sp. CNU8561001]
Length = 195
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 135/192 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 3 KSVDKSKALEAALSQIERSFGKGSIMKLGGKDSIVEIETVSTGSLSLDIALGIGGLPKGR 62
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 63 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 122
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 123 TGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 182
Query: 242 SLCQSHTLIIFL 253
S+ +S+ ++IF+
Sbjct: 183 SISKSNCMVIFI 194
>gi|352683763|ref|YP_004895747.1| recA protein [Acidaminococcus intestini RyC-MR95]
gi|350278417|gb|AEQ21607.1| recA protein [Acidaminococcus intestini RyC-MR95]
Length = 354
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL A+ Q+ DFGK S++ L I TG+L LD+ALG+GG+P+GRI+E
Sbjct: 6 EKGKALDAAVKQIEKDFGKGSIMKLGAASAKMNIETIPTGALSLDIALGVGGIPRGRIIE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH+I EAQK GGY A++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 66 IYGPESSGKTTVALHMIAEAQKRGGYAAFIDAEHALDPEYARHLGVDIDNLLISQPDTGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 126 QALEICDALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGIIS 185
Query: 245 QSHTLIIFLNQVK 257
+S T +F+NQ++
Sbjct: 186 KSRTATVFINQIR 198
>gi|209571813|gb|ACI62759.1| recombinase A, partial [Bradyrhizobium yuanmingense]
gi|242263490|gb|ACS89041.1| recombinase A [Bradyrhizobium yuanmingense]
gi|242263492|gb|ACS89042.1| recombinase A [Bradyrhizobium yuanmingense]
gi|242263494|gb|ACS89043.1| recombinase A [Bradyrhizobium yuanmingense]
gi|242263498|gb|ACS89045.1| recombinase A [Bradyrhizobium yuanmingense]
gi|242263500|gb|ACS89046.1| recombinase A [Bradyrhizobium yuanmingense]
gi|242263534|gb|ACS89063.1| recombinase A [Bradyrhizobium sp. SR43]
Length = 186
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIVEIYG
Sbjct: 1 ALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIVEIYGP 60
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L
Sbjct: 61 ESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALE 120
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T
Sbjct: 121 ICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINKSNT 180
Query: 249 LIIFLN 254
++IF+N
Sbjct: 181 MVIFIN 186
>gi|464597|sp|Q05358.1|RECA_LEGPN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|48780|emb|CAA39097.1| recA [Legionella pneumophila]
gi|227652|prf||1708209A recA gene
Length = 348
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+SQ+ FGK S++ + SR ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KQKALSAAVSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDPS A+ +G+ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DV+++DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|317121901|ref|YP_004101904.1| recombinase A [Thermaerobacter marianensis DSM 12885]
gi|315591881|gb|ADU51177.1| RecA protein [Thermaerobacter marianensis DSM 12885]
Length = 340
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 141/195 (72%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++++ AL +ALSQ+ FGK S++ + VI TGSL LD+ALG+GG+P+GRI
Sbjct: 1 MIERERALEIALSQIEKQFGKGSIMRMGEASSRLNVEVIPTGSLALDIALGVGGMPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G EASGKTT+ALHV AQ+ GG A++D E+ALDP AE +G+D NLLI+QPD+
Sbjct: 61 IEIFGPEASGKTTVALHVAASAQRAGGVAAFIDAEHALDPVYAENLGVDINNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 243 LCQSHTLIIFLNQVK 257
+ +S T +IF+NQ++
Sbjct: 181 IAKSRTCLIFINQIR 195
>gi|410666362|ref|YP_006918733.1| recombinase A [Simiduia agarivorans SA1 = DSM 21679]
gi|409028719|gb|AFV01004.1| recombinase A [Simiduia agarivorans SA1 = DSM 21679]
Length = 347
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 141/196 (71%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL+ ALSQ+ FGK +++ + G R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KEKALQAALSQIERQFGKGTVMRM----GDREQVAIPSISTGSLGLDVALGIGGLPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK GG CA++D E+ALDP AE +G++ + L+++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVIAEAQKAGGVCAFVDAEHALDPIYAEKLGVNVDELIVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L +SG++DV+VVDSVAAL PK EI + + Q+R+M+QALRKI +
Sbjct: 121 GEQALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGEMGDHHVGLQARLMSQALRKITGN 180
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++ L IF+NQ+++
Sbjct: 181 IKNANCLAIFINQIRM 196
>gi|335043023|ref|ZP_08536050.1| recA/RadA recombinase [Methylophaga aminisulfidivorans MP]
gi|333789637|gb|EGL55519.1| recA/RadA recombinase [Methylophaga aminisulfidivorans MP]
Length = 346
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ L +R +S+GS+ LD+ALGIGGLP+GRIVEI
Sbjct: 5 KKKALGAALGQIEKQFGKGSVMRLGDNAAARDVSAVSSGSIGLDIALGIGGLPRGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QKLGG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAIAEMQKLGGTAAFVDAEHALDPVYAEKLGVNIDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|311692217|dbj|BAJ25723.1| recombinase A [Rhizobium sp. T141]
gi|374281874|gb|AEZ04940.1| recombinase A, partial [Rhizobium sp. HBR22]
gi|374281884|gb|AEZ04945.1| recombinase A, partial [Rhizobium sp. HBR42]
Length = 188
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 134/188 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFL 253
S+T++IF+
Sbjct: 181 SNTMVIFI 188
>gi|410584495|ref|ZP_11321598.1| protein RecA [Thermaerobacter subterraneus DSM 13965]
gi|410504430|gb|EKP93941.1| protein RecA [Thermaerobacter subterraneus DSM 13965]
Length = 340
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 142/195 (72%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++++ AL +AL+Q+ FGK S++ + VI TGSL LD+ALG+GG+P+GRI
Sbjct: 1 MIERERALEMALNQIEKQFGKGSIMRMGEASARLNVEVIPTGSLALDIALGVGGMPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G EASGKTT+ALHV+ AQ+ GG A++D E+ALDP AE +G+D NLLI+QPD+
Sbjct: 61 IEIFGPEASGKTTVALHVVASAQRSGGVAAFIDAEHALDPVYAENLGVDINNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 243 LCQSHTLIIFLNQVK 257
+ +S T +IF+NQ++
Sbjct: 181 IAKSRTCLIFINQIR 195
>gi|224369826|ref|YP_002603990.1| recombinase A [Desulfobacterium autotrophicum HRM2]
gi|259563332|sp|C0QI90.1|RECA_DESAH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|223692543|gb|ACN15826.1| RecA [Desulfobacterium autotrophicum HRM2]
Length = 347
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 147/201 (73%), Gaps = 7/201 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRR---GPVISTGSLKLDLALGIGGL 117
A++ +KD A++ A+ Q+ FGK S++ L G+R P+ISTGSL LD ALG+GG
Sbjct: 2 AELTEKDKAIQTAMGQIERQFGKGSIMKL----GAREIQAVPIISTGSLALDKALGVGGF 57
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GR++EIYG E+SGKTTLALH + EAQ+ GG A++D E+ALD + A +G++ + LL+
Sbjct: 58 PRGRVIEIYGPESSGKTTLALHAVAEAQRQGGIAAFIDAEHALDVAYARRLGVNCDELLV 117
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L +VD L +SG++D+I+VDSVAAL+P+ EI + + Q+R+M+QALR
Sbjct: 118 SQPDTGEQALEIVDMLVRSGAVDIIIVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALR 177
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ ++ ++HT +IF+NQ+++
Sbjct: 178 KLTATIGKTHTTLIFINQIRM 198
>gi|227824639|ref|ZP_03989471.1| recA protein [Acidaminococcus sp. D21]
gi|226905138|gb|EEH91056.1| recA protein [Acidaminococcus sp. D21]
Length = 352
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 137/193 (70%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL A+ Q+ DFGK S++ L I TG+L LD+ALG+GG+P+GRI+E
Sbjct: 4 EKGKALDAAVKQIEKDFGKGSIMKLGAASAKMNIETIPTGALSLDIALGVGGIPRGRIIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH+I EAQK GGY A++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTVALHMIAEAQKRGGYAAFIDAEHALDPEYARHLGVDIDNLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 124 QALEICDALVRSGAIDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGIIS 183
Query: 245 QSHTLIIFLNQVK 257
+S T +F+NQ++
Sbjct: 184 KSRTATVFINQIR 196
>gi|374332412|ref|YP_005082596.1| recombinase A [Pseudovibrio sp. FO-BEG1]
gi|359345200|gb|AEV38574.1| recombinase A [Pseudovibrio sp. FO-BEG1]
Length = 354
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 142/195 (72%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K+ AL ALSQ+ FGK S++ + + V STGSL LD+ALGIGGLPKGRI+
Sbjct: 14 MDKNKALDAALSQIERAFGKGSIMRMGQGQAVEIQSV-STGSLSLDIALGIGGLPKGRII 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH + AQ+ GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 73 EVYGPESSGKTTLALHTVASAQRDGGICAFVDAEHALDPVYARKLGVNIDDLLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTASI 192
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 193 SKSNTMVIFINQIRM 207
>gi|350560891|ref|ZP_08929730.1| recA protein [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780998|gb|EGZ35306.1| recA protein [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 375
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 142/200 (71%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+DA + AL AL Q+ FGK +++ + R VISTGSL LD+ALGIGGLP
Sbjct: 30 EDAVDENRKKALAAALGQIERQFGKGAVMRMGDGTAVRDIEVISTGSLALDVALGIGGLP 89
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VE+YG E+SGKTTL L V+ E QKLGG A++D E+ALDP A+ +G++ + LLIA
Sbjct: 90 RGRVVEVYGPESSGKTTLTLQVVAECQKLGGTAAFIDAEHALDPGYAQKLGVNVDELLIA 149
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK
Sbjct: 150 QPDTGEQALEIADMLVRSGAVDLVVVDSVAALTPKAEIEGEMGDAHVGLQARLMSQALRK 209
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ ++ +S+TL++F+NQ+++
Sbjct: 210 LTANIKRSNTLVVFINQIRM 229
>gi|61097691|emb|CAI38690.1| recombinase A [Chromobacterium violaceum]
gi|61097701|emb|CAI38695.1| recombinase A [Chromobacterium pseudoviolaceum]
Length = 285
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 136/183 (74%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 1 QIEKQFGKGSIMRMSDNQITENLQVISTGSLSLDLALGVGGLPRGRVVEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L V+ EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 61 LCLQVVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 121 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 180
Query: 256 VKV 258
+++
Sbjct: 181 IRM 183
>gi|300023634|ref|YP_003756245.1| recA protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525455|gb|ADJ23924.1| recA protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 377
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 141/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ +FGK S++ L G+ I TGSL LD+ALGIGGLPKG
Sbjct: 14 MDKKQALEHALQQIDKNFGKGSIMRL----GANDKVDIEAIPTGSLGLDIALGIGGLPKG 69
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTLALHV+ EAQK GG CA++D E+A+DP A+ +G+ E+LLI+QP
Sbjct: 70 RIIEIYGPESSGKTTLALHVVAEAQKRGGICAFIDAEHAIDPGYAKKLGVKIEDLLISQP 129
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL PK E+ + Q+R+M+QALRK+
Sbjct: 130 DTGEQALEIADTLVRSGAVDVLVVDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLT 189
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S +++F+NQ+++
Sbjct: 190 GSISKSKCMVVFINQIRM 207
>gi|452995305|emb|CCQ93072.1| multifunctional SOS repair factor [Clostridium ultunense Esp]
Length = 350
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 146/193 (75%), Gaps = 1/193 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K+ AL +A+SQ+ FGK S++ L + + VI TGSL+LD+ALGIGG+P+GRI+E
Sbjct: 6 EKNKALDMAISQIEKQFGKGSIMRLGDT-KTVKMEVIPTGSLELDIALGIGGVPRGRIIE 64
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALHVI EAQK G A++D E+ALDP+ A+ +G+D ENL+++QPD+ E
Sbjct: 65 IYGPESSGKTTVALHVIAEAQKRDGIAAFIDAEHALDPNYAKKLGVDVENLIVSQPDTGE 124
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG++D++VVDSVAAL+PK EI + + Q+R+M+QALRK+ ++
Sbjct: 125 QGLEITEALVRSGAVDIVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGAIN 184
Query: 245 QSHTLIIFLNQVK 257
+S+T +IF+NQ++
Sbjct: 185 KSNTTVIFINQLR 197
>gi|429757402|ref|ZP_19289938.1| RecA protein [Actinomyces sp. oral taxon 181 str. F0379]
gi|429175072|gb|EKY16525.1| RecA protein [Actinomyces sp. oral taxon 181 str. F0379]
Length = 363
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL LALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALELALSQIDKQFGKGSVM---RLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D +NLL++QPD+
Sbjct: 73 EIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYARALGVDTDNLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 193 SATGTTAIFINQLR 206
>gi|46447629|ref|YP_008994.1| recombinase A [Candidatus Protochlamydia amoebophila UWE25]
gi|46401270|emb|CAF24719.1| probable recombination protein recA [Candidatus Protochlamydia
amoebophila UWE25]
Length = 361
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 142/193 (73%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL LA+SQ+ FG+ +++S + + VI TG+L LD+ALGIGG+P+GR+VE
Sbjct: 10 ERKKALGLAVSQIKKQFGEGAIMSFGKHSSEKEMSVIKTGALALDIALGIGGVPRGRVVE 69
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGK+TLALH++ AQK GG AY+D E+ALDPS A +GI+ ++L+I+QPDS E
Sbjct: 70 IYGPESSGKSTLALHIVANAQKNGGLAAYIDAEHALDPSYAGKIGINIDDLMISQPDSGE 129
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L++ + L +S ++DVIV+DSVAAL+PK E+ I + Q+R+M+QALRK+ SL
Sbjct: 130 EALNIAEMLARSNAVDVIVIDSVAALVPKSELEGEIGDQFMGLQARMMSQALRKLTASLS 189
Query: 245 QSHTLIIFLNQVK 257
+S+T IF+NQ++
Sbjct: 190 KSNTCAIFINQIR 202
>gi|325974150|emb|CBM42973.1| recombinase A, partial [Rhizobium sp. STM 6135]
gi|325974152|emb|CBM42974.1| recombinase A, partial [Rhizobium sp. STM 6155]
Length = 191
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 135/190 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 2 VDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRII 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIFL 253
+S+T++IF+
Sbjct: 182 SKSNTMVIFI 191
>gi|115498191|gb|ABI98675.1| RecA [Rhizobium sp. CCBAU 33220]
Length = 183
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 131/178 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK SM+ L ISTGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL
Sbjct: 1 FGKGSMMKLGSNENVVEIETISTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DTL +SG++D
Sbjct: 61 IAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 178
>gi|421957944|gb|AFX72849.1| recombinase A, partial [Rhizobium sp. CNU8500002]
Length = 193
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 134/191 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 2 KSVDKSKALEAALSQIERSFGKGSIMKLGGKDSIVEIETVSTGSLSLDIALGIGGLPKGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 62 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 122 TGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 181
Query: 242 SLCQSHTLIIF 252
S+ +S+ ++IF
Sbjct: 182 SISKSNCMVIF 192
>gi|374281852|gb|AEZ04929.1| recombinase A, partial [Rhizobium phaseoli]
gi|374281856|gb|AEZ04931.1| recombinase A, partial [Rhizobium phaseoli]
gi|374281864|gb|AEZ04935.1| recombinase A, partial [Rhizobium phaseoli]
gi|374281866|gb|AEZ04936.1| recombinase A, partial [Rhizobium phaseoli]
gi|374281870|gb|AEZ04938.1| recombinase A, partial [Rhizobium phaseoli]
gi|374281890|gb|AEZ04948.1| recombinase A, partial [Rhizobium phaseoli]
Length = 188
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 134/188 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFL 253
S+T++IF+
Sbjct: 181 SNTMVIFI 188
>gi|87199296|ref|YP_496553.1| recombinase A [Novosphingobium aromaticivorans DSM 12444]
gi|87134977|gb|ABD25719.1| recA protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 142/200 (71%), Gaps = 7/200 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
K M + AL AL+Q+ FGK S + L GS+ +STGSL LD+ALGIGGLP
Sbjct: 14 KDMDRQKALDAALAQIDRAFGKGSAMRL----GSKEAMQVEAVSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRI+EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A +G+D +NL+++
Sbjct: 70 RGRIIEIYGPESSGKTTLALHAIAEAQKGGGTAAFIDAEHALDPVYARKLGVDIDNLIVS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK
Sbjct: 130 QPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S ++IF+NQV++
Sbjct: 190 LTGSISRSRCMVIFINQVRM 209
>gi|340756969|ref|ZP_08693573.1| RecA protein [Fusobacterium varium ATCC 27725]
gi|251834235|gb|EES62798.1| RecA protein [Fusobacterium varium ATCC 27725]
Length = 373
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 141/194 (72%), Gaps = 1/194 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K+ AL LA+ Q++ +FG+ S++ L S VISTGSL L++ALG+GG+P+GRI+
Sbjct: 9 MSKEKALDLAIKQISKEFGEGSIMKLGNNL-SMNVEVISTGSLNLNIALGVGGVPRGRII 67
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH++ EAQK GG A++D E+ALDP A A+G+D + LLI+QPD
Sbjct: 68 EVYGAESSGKTTIALHIVAEAQKAGGIAAFIDAEHALDPVYARALGVDVDELLISQPDYG 127
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++D+IVVDSVAAL+PK EI + Q+R+M++ALRK+ +L
Sbjct: 128 EQALEIADMLVRSNAVDIIVVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRKLTATL 187
Query: 244 CQSHTLIIFLNQVK 257
+S T ++F+NQ++
Sbjct: 188 NKSKTTMVFINQIR 201
>gi|372267657|ref|ZP_09503705.1| recombinase A [Alteromonas sp. S89]
Length = 343
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 141/193 (73%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
KD AL+ ALSQ+ FGK +++ + R P ISTGSL LD+ALGIGGLP+GRIVEI
Sbjct: 5 KDKALQAALSQIERQFGKGTVMRMGDKE-RERIPAISTGSLGLDVALGIGGLPRGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI EAQ+ GG CA++D E+ALDP AE +G++ + L+++QPD+ E
Sbjct: 64 YGPESSGKTTLTLQVIAEAQRKGGTCAFVDAEHALDPIYAEKLGVNVDELIVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L V D L +SG++DV++VDSVAAL P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 124 ALEVADMLVRSGAVDVLIVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKLTGNIKN 183
Query: 246 SHTLIIFLNQVKV 258
++TL +F+NQ+++
Sbjct: 184 TNTLCVFINQIRM 196
>gi|325183181|emb|CCA17639.1| protein recA putative [Albugo laibachii Nc14]
Length = 717
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 154/227 (67%), Gaps = 7/227 (3%)
Query: 32 DAITCIGMNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKR 91
+ + C+ M+I +LS+ ++ + E D K NAL +A+ Q+ + FGK S++ L
Sbjct: 334 NVLNCVTMHIQNLSTRSKKISANKEHSD------KSNALAMAIRQIESSFGKGSVMQLGS 387
Query: 92 FFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKL-GGY 150
+ R VISTGSL LD ALGIGGLP+GRIVEIYG E+SGKTTLAL I +AQK G
Sbjct: 388 AKIAERVEVISTGSLSLDYALGIGGLPRGRIVEIYGPESSGKTTLALSCIAQAQKKDGAV 447
Query: 151 CAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAAL 210
CA++D E+A+D A A+G++ E L ++QPDS E L + DTL +SG++D++V+DSVAAL
Sbjct: 448 CAFIDAEHAIDAHYANALGVNIEELYVSQPDSGEQALEITDTLIRSGAVDLVVLDSVAAL 507
Query: 211 IPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
+P+ E+ + Q+R+M+QALRK+ SL +S+ +IFLNQ++
Sbjct: 508 VPRAELEGEMGDQQIALQARLMSQALRKLTGSLSKSNCTLIFLNQIR 554
>gi|374281872|gb|AEZ04939.1| recombinase A, partial [Rhizobium giardinii]
Length = 188
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 133/188 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGGKDSIVEIETVSTGSLSLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFL 253
S+ ++IF+
Sbjct: 181 SNCMVIFI 188
>gi|289208783|ref|YP_003460849.1| recA protein [Thioalkalivibrio sp. K90mix]
gi|288944414|gb|ADC72113.1| recA protein [Thioalkalivibrio sp. K90mix]
Length = 348
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 144/196 (73%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
+ AL AL Q+ FGK +++ + G ++ P ISTGSL LD+ALGIGG+P+GR+
Sbjct: 5 RKKALTAALGQIERQFGKGAVMRM----GDQQAVDVPAISTGSLALDIALGIGGVPRGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L V+ EAQKLGG A++D E+ALDP+ AE +G++ ++LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQVVAEAQKLGGTAAFVDAEHALDPTYAEKLGVNVDDLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++DV++VDSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIADMLVRSGAVDVVIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTAN 180
Query: 243 LCQSHTLIIFLNQVKV 258
+ +S+TL+IF+NQ+++
Sbjct: 181 IKRSNTLVIFINQIRM 196
>gi|340759367|ref|ZP_08695939.1| recA [Fusobacterium varium ATCC 27725]
gi|251835562|gb|EES64102.1| recA [Fusobacterium varium ATCC 27725]
Length = 363
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 143/199 (71%), Gaps = 7/199 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
++ +K+ AL LA+ Q+ DFG+ S++ L G + VISTGS+ LD ALG+GG+P
Sbjct: 12 EVSEKEKALELAMKQIKKDFGEGSIMKL----GDNQEMNVEVISTGSINLDAALGLGGVP 67
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTT+ALH+ EAQK GG A++D E+ALDP A+A+G+D + LLI+
Sbjct: 68 RGRIVEIYGAESSGKTTIALHIAAEAQKTGGIVAFIDAEHALDPVYAKALGVDVDELLIS 127
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + D L +SG++D+IVVDSVAAL+PK EI + Q+R+M++ALRK
Sbjct: 128 QPDYGEQALEIADMLVRSGAVDLIVVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRK 187
Query: 239 IHYSLCQSHTLIIFLNQVK 257
+ +L +S T ++F+NQ++
Sbjct: 188 LTATLNKSKTTMVFINQIR 206
>gi|431805797|ref|YP_007232698.1| recombinase A [Liberibacter crescens BT-1]
gi|430799772|gb|AGA64443.1| RecA protein [Liberibacter crescens BT-1]
Length = 345
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 141/199 (70%), Gaps = 8/199 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPK 119
M K AL ALSQ+ FGK S++ L GS+ V ISTGSL LD+ALGIGGLPK
Sbjct: 1 MDKGKALEAALSQIERSFGKGSIMRL----GSKENVVEIETISTGSLGLDIALGIGGLPK 56
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI EIYG E+SGKTTLALH I +AQK G CA++D E+A D A+ +G+D +NLL++Q
Sbjct: 57 GRITEIYGPESSGKTTLALHTIAQAQKKSGICAFVDAEHAFDSLYAKKLGVDLQNLLVSQ 116
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 117 PDTGEQALEITDTLIRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGMQARLMSQALRKL 176
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S+ ++IF+NQ+++
Sbjct: 177 TASISRSNCILIFINQMRM 195
>gi|332799245|ref|YP_004460744.1| protein recA [Tepidanaerobacter acetatoxydans Re1]
gi|438002374|ref|YP_007272117.1| RecA protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696980|gb|AEE91437.1| Protein recA [Tepidanaerobacter acetatoxydans Re1]
gi|432179168|emb|CCP26141.1| RecA protein [Tepidanaerobacter acetatoxydans Re1]
Length = 345
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 146/195 (74%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+ +K+ AL +A++Q+ FGK S++ L ISTG+L LD+ALG+GG+P+GR+
Sbjct: 1 MAEKEKALEMAITQIERQFGKGSIMKLGEAAARFNIEAISTGALPLDIALGVGGVPRGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTT+ALH+I EAQK GG A++D E+ALDP+ A+ +G++ ++LLI+QPD+
Sbjct: 61 IEIFGPESSGKTTVALHIIAEAQKGGGTAAFIDAEHALDPTYAKNLGVNTDDLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + +TL +SG++DV+V+DSVAAL+PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIAETLVRSGAVDVVVIDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGA 180
Query: 243 LCQSHTLIIFLNQVK 257
+ +S+T+ IF+NQ++
Sbjct: 181 ISKSNTVAIFINQLR 195
>gi|254489873|ref|ZP_05103068.1| protein RecA [Methylophaga thiooxidans DMS010]
gi|224464958|gb|EEF81212.1| protein RecA [Methylophaga thiooxydans DMS010]
Length = 347
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 140/194 (72%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + +R +STGS+ LD+ALGIGGLP+GR++E
Sbjct: 4 NKKKALGAALGQIEKQFGKGAVMRMGDAGAARDIAAVSTGSIGLDVALGIGGLPRGRVIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I E QK+GG A++D E+ALDP AE +G+D ++LL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPVYAEKLGVDIDDLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 245 QSHTLIIFLNQVKV 258
+S+TL+IF+NQ+++
Sbjct: 184 RSNTLVIFINQIRM 197
>gi|254470359|ref|ZP_05083763.1| protein RecA [Pseudovibrio sp. JE062]
gi|211960670|gb|EEA95866.1| protein RecA [Pseudovibrio sp. JE062]
Length = 354
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 141/195 (72%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K+ AL ALSQ+ FGK S++ + + V STGSL LD+ LGIGGLPKGRI+
Sbjct: 14 MDKNKALDAALSQIERAFGKGSIMRMGQGQAVEIQSV-STGSLSLDIGLGIGGLPKGRII 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + AQ+ GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLALHTVASAQREGGICAFVDAEHALDPVYARKLGVNIDDLLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTASI 192
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 193 SKSNTMVIFINQIRM 207
>gi|373457380|ref|ZP_09549147.1| Protein recA [Caldithrix abyssi DSM 13497]
gi|371719044|gb|EHO40815.1| Protein recA [Caldithrix abyssi DSM 13497]
Length = 348
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 144/196 (73%), Gaps = 7/196 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K A+ +A+SQ+ +FGK +++ L G R VI TGS+ LD ALGIGG+P+GR
Sbjct: 6 EKAKAIEIAVSQIERNFGKGAIMRL----GDRVKIDVDVIPTGSVSLDAALGIGGVPRGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I EIYG E+SGKTTLALH+I EAQK GG A++D E+ALDP A+ +G+D NLL++QPD
Sbjct: 62 ITEIYGPESSGKTTLALHIIAEAQKRGGLAAFVDAEHALDPGYAKKLGVDTINLLVSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +V+TL +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 122 NGEQALEIVETLVRSGALDVIVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTG 181
Query: 242 SLCQSHTLIIFLNQVK 257
++ +S+T +IF+NQ++
Sbjct: 182 TVSKSNTCVIFINQIR 197
>gi|88798291|ref|ZP_01113877.1| recombinase A [Reinekea blandensis MED297]
gi|88779067|gb|EAR10256.1| recombinase A [Reinekea sp. MED297]
Length = 365
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 142/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL ALSQ+ FGK S++ + G + P ISTGSL LD+ALGIGGLPKGR+
Sbjct: 10 KEKALSAALSQIERQFGKGSVMRM----GDQEKVNVPAISTGSLGLDIALGIGGLPKGRV 65
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQK GG CA++D E+ALDP+ A +G++ ++LL++QPD+
Sbjct: 66 VEIYGPESSGKTTLTLQVIAEAQKAGGTCAFVDAEHALDPNYAGKLGVNVDDLLVSQPDT 125
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI +
Sbjct: 126 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDHHVGLQARLMSQALRKITGN 185
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++ L+IF+NQ+++
Sbjct: 186 IKTANCLVIFINQIRM 201
>gi|427408934|ref|ZP_18899136.1| protein recA [Sphingobium yanoikuyae ATCC 51230]
gi|425713244|gb|EKU76258.1| protein recA [Sphingobium yanoikuyae ATCC 51230]
Length = 356
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 141/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLPKG
Sbjct: 16 MDRQKALEAALAQIDRAFGKGSAMKL----GSREKIEIESISTGSLGLDIALGIGGLPKG 71
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTL LH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 72 RIIEIYGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVDIDELIVSQP 131
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +ID++VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 132 DTGEQALEIVDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 191
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQV++
Sbjct: 192 GSIARSKCMVIFINQVRM 209
>gi|394989244|ref|ZP_10382078.1| recombinase A [Sulfuricella denitrificans skB26]
gi|393791663|dbj|GAB71717.1| recombinase A [Sulfuricella denitrificans skB26]
Length = 343
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL ALSQ+ FGK S++ L + V+STGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 KNKALAAALSQIEKQFGKGSIMRLGDGEVVKDIQVVSTGSLGLDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QKLGG A++D E+ALDP A+ +G++ +LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKLGVNVSDLLISQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SGS+D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGSVDIVVIDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGNIKR 184
Query: 246 SHTLIIFLNQVKV 258
++TL+IF+NQ+++
Sbjct: 185 TNTLVIFINQIRM 197
>gi|347540647|ref|YP_004848072.1| recombinase A [Pseudogulbenkiania sp. NH8B]
gi|345643825|dbj|BAK77658.1| RecA protein [Pseudogulbenkiania sp. NH8B]
Length = 351
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 136/183 (74%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 18 QIEKQFGKGSIMRMSDNQITENLQVISTGSLGLDLALGVGGLPRGRVVEIYGPESSGKTT 77
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L V+ EAQKLGG CAY+D ENALDP+ A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 78 LCLQVVAEAQKLGGTCAYIDAENALDPTYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 137
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + +R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 138 SSGVDVIVVDSVAALVPKAEIEGEMGDNHVGLHARLMSQALRKLTGNIKRTNTLVIFINQ 197
Query: 256 VKV 258
+++
Sbjct: 198 IRM 200
>gi|295688601|ref|YP_003592294.1| recombination protein RecA [Caulobacter segnis ATCC 21756]
gi|295430504|gb|ADG09676.1| recA protein [Caulobacter segnis ATCC 21756]
Length = 356
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 142/196 (72%), Gaps = 9/196 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V +STGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEMESVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+E+YG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ ++LL++QPD
Sbjct: 72 IIEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAHKLGVNLDSLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVIDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVK 257
S+ +++T++IF+NQ++
Sbjct: 192 SINKANTIVIFINQIR 207
>gi|406367542|gb|AFS44213.1| recombinase A, partial [Bradyrhizobium genosp. SA-2]
Length = 190
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 136/189 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLIIF 252
+S+ ++IF
Sbjct: 182 NKSNAMVIF 190
>gi|94496514|ref|ZP_01303090.1| recA protein [Sphingomonas sp. SKA58]
gi|94423874|gb|EAT08899.1| recA protein [Sphingomonas sp. SKA58]
Length = 384
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLPKG
Sbjct: 43 MDRQKALDAALAQIDRAFGKGSAMKL----GSREKIEIESISTGSLGLDIALGIGGLPKG 98
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTL LH I EAQK GG A++D E+ALDP+ A+ +G+D + L+++QP
Sbjct: 99 RIIEIYGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPAYAKKLGVDIDELIVSQP 158
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +ID++V+DSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 159 DTGEQALEIVDTLVRSNAIDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 218
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQV++
Sbjct: 219 GSISRSKCMVIFINQVRM 236
>gi|83589927|ref|YP_429936.1| recA protein [Moorella thermoacetica ATCC 39073]
gi|83572841|gb|ABC19393.1| RecA protein [Moorella thermoacetica ATCC 39073]
Length = 348
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 140/195 (71%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
I +K AL +ALSQ+ FGK S++ L ISTG+L LDLALG+GGLP+GR+
Sbjct: 6 INEKQRALEMALSQIERHFGKGSIMRLGETGARLNVEAISTGALPLDLALGVGGLPRGRV 65
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTT+ALHVI EAQ+ GG A++D E+ALDP A +G+D +NLL++QPD+
Sbjct: 66 IEIFGPESSGKTTVALHVIAEAQRAGGTAAFIDAEHALDPVYAHNLGVDTDNLLVSQPDT 125
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG+IDVIV+DSVAAL+P+ E+ + + Q+R+M+QALRK+
Sbjct: 126 GEQALEIAEALVRSGAIDVIVIDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLAGI 185
Query: 243 LCQSHTLIIFLNQVK 257
+ +S T+ IF+NQ++
Sbjct: 186 ISKSRTVAIFINQLR 200
>gi|1172889|sp|P42447.1|RECA_RHOCA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|558631|emb|CAA57673.1| recA [Rhodobacter capsulatus]
gi|1581748|prf||2117248A recA gene
Length = 355
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 142/203 (69%), Gaps = 6/203 (2%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIG 115
+D K AL AL+Q+ FGK S++ L G P I STGSL LD+ALGIG
Sbjct: 10 NDKGKADKQKALECALAQIERQFGKGSIMKLG---GDTPPPEIEATSTGSLGLDIALGIG 66
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
GLPKGRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G+ E+L
Sbjct: 67 GLPKGRIVEIYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPYYAKKLGVSLEDL 126
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
LI+QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + AQ+R+M+QA
Sbjct: 127 LISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKAEIEGDMGDATVGAQARLMSQA 186
Query: 236 LRKIHYSLCQSHTLIIFLNQVKV 258
+RK+ S+ +S+ ++IF+NQ+++
Sbjct: 187 MRKLTASIGRSNCMVIFINQIRM 209
>gi|381201040|ref|ZP_09908171.1| recombinase A [Sphingobium yanoikuyae XLDN2-5]
Length = 341
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 141/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGGLPKG
Sbjct: 1 MDRQKALEAALAQIDRAFGKGSAMKL----GSREKIEIESISTGSLGLDIALGIGGLPKG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTL LH I EAQK GG A++D E+ALDP A+ +G+D + L+++QP
Sbjct: 57 RIIEIYGPESSGKTTLTLHAIAEAQKAGGTAAFVDAEHALDPIYAKKLGVDIDELIVSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +ID++VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 117 DTGEQALEIVDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQV++
Sbjct: 177 GSIARSKCMVIFINQVRM 194
>gi|161728767|dbj|BAF94200.1| recombinase A [Pseudochrobactrum glaciei]
Length = 255
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + + TGSL LD+ALG+GGLPKGRIVEIYG
Sbjct: 1 ALDAALSQIERQFGKGSIMRLGQSEVVEI-ETVPTGSLSLDIALGVGGLPKGRIVEIYGP 59
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D E+LLI+QPD+ E L
Sbjct: 60 ESSGKTTLALHTIAEAQKKGGMCAFVDAEHALDPVYARKLGVDLESLLISQPDTGEQALE 119
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 120 ITDTLVRSGAIDVLVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTASISRSNC 179
Query: 249 LIIFLNQVKV 258
++IF+NQ+++
Sbjct: 180 MVIFINQIRM 189
>gi|340755232|ref|ZP_08691928.1| recA [Fusobacterium sp. D12]
gi|340573547|gb|EFS22670.2| recA [Fusobacterium sp. D12]
Length = 348
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+ ++ DFG+ +++ L + VI TGSL LD ALG+GG+P+GR+VEI
Sbjct: 6 KQKALETAVKEITKDFGEGAIMKLGDN-SHMQIEVIPTGSLNLDAALGLGGVPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+A+G+D + LLIAQPD E
Sbjct: 65 YGAESSGKTTIALHIIAEAQKMGGIAAFIDAEHALDPVYAKALGVDIDELLIAQPDFGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDVIVVDSVAAL+PK EI ++ Q+R+M++ALRK+ +L +
Sbjct: 125 ALDIADTLVRSGAIDVIVVDSVAALVPKVEIDGEMSDQQMGLQARLMSKALRKLTATLNK 184
Query: 246 SHTLIIFLNQVK 257
S T +IF+NQ++
Sbjct: 185 SKTTMIFINQIR 196
>gi|374705872|ref|ZP_09712742.1| recombinase A [Pseudomonas sp. S9]
Length = 347
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQKLG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|90416732|ref|ZP_01224662.1| recombinase A [gamma proteobacterium HTCC2207]
gi|90331485|gb|EAS46721.1| recombinase A [marine gamma proteobacterium HTCC2207]
Length = 340
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + G+R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKSKALEAALGQIERQFGKGTVMRMGE--GTRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI EAQK GG CA++D E+ALDP AE +G+ ++L+++QPD+
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQKAGGTCAFIDAEHALDPVYAEKLGVSVDDLIVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L V D L +SG+ DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 122 EQALEVTDMLVRSGACDVLVVDSVAALTPRAEIEGDMGDHHVGLQARLMSQALRKLTGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|217979628|ref|YP_002363775.1| recA protein [Methylocella silvestris BL2]
gi|217505004|gb|ACK52413.1| recA protein [Methylocella silvestris BL2]
Length = 355
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + + TGSL LD+ALG+GGLP+GR+V
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGKNQKVVEIETVPTGSLGLDVALGVGGLPRGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LHVI EAQK GG CA++D E+ALD A +G++ E+LL++QPD+
Sbjct: 74 EIYGPESSGKTTLTLHVIAEAQKKGGVCAFIDAEHALDTIYARKLGVNLEDLLVSQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSQPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 SRSNTMVIFINQIRM 208
>gi|148553436|ref|YP_001261018.1| recombinase A [Sphingomonas wittichii RW1]
gi|148498626|gb|ABQ66880.1| recA protein [Sphingomonas wittichii RW1]
Length = 357
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 144/202 (71%), Gaps = 7/202 (3%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGG 116
+A M + AL AL+Q+ FGK S + L GSR ISTGSL LD+ALGIGG
Sbjct: 13 EAANMDRQKALEAALAQIDRAFGKGSAMKL----GSRETMQVEAISTGSLGLDIALGIGG 68
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGR+VE++G E+SGKTTLALH I EAQK+GG A++D E+ALDP A+ +G++ + L+
Sbjct: 69 LPKGRVVEVFGPESSGKTTLALHAIAEAQKVGGTAAFIDAEHALDPVYAKKLGVNIDELI 128
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
++QPD+ E L + DTL +S +IDV+V+DSVAAL+P+ EI + + Q+R+M+QAL
Sbjct: 129 VSQPDTGEQALEIADTLVRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQAL 188
Query: 237 RKIHYSLCQSHTLIIFLNQVKV 258
RKI S+ +S L+IF+NQ+++
Sbjct: 189 RKITGSISRSKCLVIFINQIRM 210
>gi|34497062|ref|NP_901277.1| recombinase A [Chromobacterium violaceum ATCC 12472]
gi|60393012|sp|Q7NXL9.1|RECA_CHRVO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|34102919|gb|AAQ59283.1| RecA protein [Chromobacterium violaceum ATCC 12472]
Length = 350
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 135/183 (73%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 16 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 75
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 76 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 135
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 136 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 195
Query: 256 VKV 258
+++
Sbjct: 196 IRM 198
>gi|373112777|ref|ZP_09527004.1| protein recA [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
gi|371654917|gb|EHO20278.1| protein recA [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
Length = 348
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+ ++ DFG+ +++ L + VI TGSL LD ALG+GG+P+GR+VEI
Sbjct: 6 KQKALETAVKEITKDFGEGAIMKLGDN-SHMQIEVIPTGSLNLDAALGLGGVPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+A+G+D + LLIAQPD E
Sbjct: 65 YGAESSGKTTIALHIIAEAQKMGGIAAFIDAEHALDPVYAKALGVDIDELLIAQPDFGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDVIVVDSVAAL+PK EI ++ Q+R+M++ALRK+ +L +
Sbjct: 125 ALDIADTLVRSGAIDVIVVDSVAALVPKVEIDGEMSDQQMGLQARLMSKALRKLTATLNK 184
Query: 246 SHTLIIFLNQVK 257
S T +IF+NQ++
Sbjct: 185 SKTTMIFINQIR 196
>gi|340751351|ref|ZP_08688172.1| recA [Fusobacterium mortiferum ATCC 9817]
gi|229421667|gb|EEO36714.1| recA [Fusobacterium mortiferum ATCC 9817]
Length = 359
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 144/199 (72%), Gaps = 7/199 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
++ ++ AL +A+ Q+ DFG+ S++ L GS + ISTGS+ LDLALG GG+P
Sbjct: 7 EVNDREKALEMAMKQIKKDFGEGSIMKL----GSNQSMAVETISTGSINLDLALGQGGVP 62
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTT+ALH+ EAQK+GG A++D E+ALDP A+A+G+D + LLI+
Sbjct: 63 RGRIVEIYGAESSGKTTIALHIAAEAQKMGGIVAFIDAEHALDPVYAKALGVDVDELLIS 122
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + D L +SG++D++VVDSVAAL+PK EI ++ Q+R+M++ALRK
Sbjct: 123 QPDYGEQALEIADMLVRSGAVDLVVVDSVAALVPKAEIDGEMSDQQMGLQARLMSKALRK 182
Query: 239 IHYSLCQSHTLIIFLNQVK 257
+ +L +S T +IF+NQ++
Sbjct: 183 LTATLNKSKTTMIFINQIR 201
>gi|298205322|gb|ADI61872.1| recombinase protein A [Mesorhizobium sp. JS6]
Length = 183
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 133/178 (74%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L S +STGSL LD+ALG+GGLP+GRIVEIYG E+SGKTT+ALH
Sbjct: 1 FGKGSVMRLGANEKSVEIETVSTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTMALHT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG++D
Sbjct: 61 VAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 178
>gi|357406174|ref|YP_004918098.1| protein RecA (Recombinase A) [Methylomicrobium alcaliphilum 20Z]
gi|351718839|emb|CCE24513.1| Protein RecA (Recombinase A) [Methylomicrobium alcaliphilum 20Z]
Length = 346
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + SR V+STGSL LD+ALG GGLP+GR++EI
Sbjct: 5 KKKALGAALMQIEKQFGKGSVMRMGDVAASRDIQVVSTGSLSLDIALGCGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI + QKLGG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLSVIAQMQKLGGTAAFVDAEHALDPGYAEKIGVNVDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|330504207|ref|YP_004381076.1| recombinase A [Pseudomonas mendocina NK-01]
gi|328918493|gb|AEB59324.1| recombinase A [Pseudomonas mendocina NK-01]
Length = 347
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQKLG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|114771070|ref|ZP_01448510.1| recombinase A [Rhodobacterales bacterium HTCC2255]
gi|114548352|gb|EAU51238.1| recombinase A [alpha proteobacterium HTCC2255]
Length = 362
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 138/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K M K+ AL AL Q+ FGK S++ L STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSMDKEKALESALGQIERQFGKGSIMKLGDESARLDIEATSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTL LH I E QK GG CA++D E+ALDP+ A+ +G+D + LLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPTYAKRLGVDIDELLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++ ++VVDSVAAL P+ E+ + AQ+R+M+QA+RK+
Sbjct: 132 AGEQALEITDTLVRSGAVSMVVVDSVAALTPRAELEGDMGDHQVGAQARLMSQAMRKLTG 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 192 SIAKSGCMVIFINQIRM 208
>gi|94309411|ref|YP_582621.1| recombinase A [Cupriavidus metallidurans CH34]
gi|430807700|ref|ZP_19434815.1| recombinase A [Cupriavidus sp. HMR-1]
gi|123081425|sp|Q1LR74.1|RECA_RALME RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|93353263|gb|ABF07352.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Cupriavidus metallidurans CH34]
gi|429499984|gb|EKZ98374.1| recombinase A [Cupriavidus sp. HMR-1]
Length = 353
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 142/206 (68%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ L + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD A +G+D
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
NLLI+QPD+ E L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M
Sbjct: 121 GNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+QALRK+ ++ +++ L+IF+NQ+++
Sbjct: 181 SQALRKLTGTIKRTNCLVIFINQIRM 206
>gi|144123|gb|AAA22999.1| RecA protein [Brucella abortus]
Length = 360
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 141/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+ ENLLI+QP +
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVHLENLLISQPITG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA---QSRIMTQALRKIH 240
E L + DTL +SG+IDV+VVDSVAAL P+ E I G D+ Q+R+M+QA+RK+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAE----IEGEMGDSHGLQARLMSQAVRKLT 189
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S+ ++IF+NQ+++
Sbjct: 190 GSISRSNCMVIFINQIRM 207
>gi|399521378|ref|ZP_10762118.1| Protein recA;Recombinase A [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399110616|emb|CCH38678.1| Protein recA;Recombinase A [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 347
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQKLG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|294677288|ref|YP_003577903.1| RecA protein [Rhodobacter capsulatus SB 1003]
gi|294476108|gb|ADE85496.1| RecA protein [Rhodobacter capsulatus SB 1003]
Length = 355
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 142/203 (69%), Gaps = 6/203 (2%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIG 115
+D K AL AL+Q+ FGK S++ L G P I STGSL LD+ALGIG
Sbjct: 10 NDKGKADKQKALESALAQIERQFGKGSIMKLG---GDTPPPEIEATSTGSLGLDIALGIG 66
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
GLPKGRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G+ E+L
Sbjct: 67 GLPKGRIVEIYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPYYAKKLGVSLEDL 126
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
LI+QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + AQ+R+M+QA
Sbjct: 127 LISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKAEIEGDMGDATVGAQARLMSQA 186
Query: 236 LRKIHYSLCQSHTLIIFLNQVKV 258
+RK+ S+ +S+ ++IF+NQ+++
Sbjct: 187 MRKLTASIGRSNCMVIFINQIRM 209
>gi|384085451|ref|ZP_09996626.1| recA protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 345
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 138/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 QRSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIAVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q+ GG A++D E+ALDP A +G+D ENLL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIASCQQAGGTAAFIDAEHALDPGYAHKLGVDLENLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDLIVVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIS 183
Query: 245 QSHTLIIFLNQVKV 258
+++TL+IF+NQ+++
Sbjct: 184 RTNTLVIFINQIRM 197
>gi|255021553|ref|ZP_05293596.1| RecA protein [Acidithiobacillus caldus ATCC 51756]
gi|340782427|ref|YP_004749034.1| RecA protein [Acidithiobacillus caldus SM-1]
gi|254968941|gb|EET26460.1| RecA protein [Acidithiobacillus caldus ATCC 51756]
gi|340556579|gb|AEK58333.1| RecA protein [Acidithiobacillus caldus SM-1]
Length = 347
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 HRSKALAAALSQIDKQFGKGAIMRLGEQSAVKDIQVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q GG A++D E+ALDPS A+ +G+D ENLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIASCQASGGTAAFIDAEHALDPSYAQKLGVDLENLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDLIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIS 183
Query: 245 QSHTLIIFLNQVKV 258
+++TL+IF+NQ+++
Sbjct: 184 RTNTLVIFINQIRM 197
>gi|68349493|gb|AAY96638.1| RecA [Mesorhizobium sp. ICMP 11736]
Length = 191
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 135/191 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 1 KSVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIF 252
S+ +S+T++IF
Sbjct: 181 SISRSNTMVIF 191
>gi|323141085|ref|ZP_08075990.1| RecA protein [Phascolarctobacterium succinatutens YIT 12067]
gi|322414461|gb|EFY05275.1| RecA protein [Phascolarctobacterium succinatutens YIT 12067]
Length = 350
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 138/192 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +A+ Q+ DFGK S++ L VI TG+L LD+ALG+GG+P+GR++EI
Sbjct: 5 KKKALDMAMHQIEKDFGKGSIMMLGEASAKMNIEVIPTGALSLDIALGVGGIPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQK+GGY A++D E+ALDP A +G+D ++LLI+QPD+ E
Sbjct: 65 YGPESSGKTTVALHMIAEAQKMGGYAAFIDAEHALDPEYARHLGVDIDDLLISQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ + +
Sbjct: 125 ALEIADALVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGLISK 184
Query: 246 SHTLIIFLNQVK 257
S IF+NQ++
Sbjct: 185 SKCATIFINQIR 196
>gi|251773419|gb|EES53968.1| recA protein [Leptospirillum ferrodiazotrophum]
Length = 357
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 138/193 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +L LALSQ+ FGK S++ + + PVIS+GSL LD+ALGIGG PKGRI+EI
Sbjct: 8 KQRSLDLALSQIEKQFGKGSIMRMGKDAPIIETPVISSGSLALDIALGIGGYPKGRIIEI 67
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I E K G A++D E+ALD A +G+ E+LLIAQPDS E
Sbjct: 68 YGPESSGKTTLALHAIAEVHKKNGMAAFIDAEHALDLGYARKLGVKTEDLLIAQPDSGEQ 127
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SGS+D+IVVDSVAAL+PK E+ + + Q+R+M+QALRK+ S+ +
Sbjct: 128 ALEIAETLVRSGSLDLIVVDSVAALVPKAELEGDMGDSHMGLQARLMSQALRKLTSSISK 187
Query: 246 SHTLIIFLNQVKV 258
S T++IF+NQ+++
Sbjct: 188 SSTVVIFINQIRM 200
>gi|373487512|ref|ZP_09578179.1| RecA protein [Holophaga foetida DSM 6591]
gi|372008587|gb|EHP09212.1| RecA protein [Holophaga foetida DSM 6591]
Length = 352
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 137/189 (72%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
L AL+ + FGK S++ L + VISTGS+ LD ALG+GG+PKGRIVE+YG E
Sbjct: 13 LNRALADIERAFGKGSIMKLGDRMNADGIEVISTGSISLDSALGVGGVPKGRIVEVYGPE 72
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
ASGKTTLALH++ EAQK GG AY+D E+ALDP A +G+D +NL I+QPDS E L +
Sbjct: 73 ASGKTTLALHMVAEAQKKGGLAAYIDAEHALDPEYARKLGVDVDNLFISQPDSGEQALEI 132
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
D L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ ++++
Sbjct: 133 CDQLVRSGALDIIVVDSVAALVPKAEIDGEMGDTHVGLQARLMSQALRKMTATISRTNSC 192
Query: 250 IIFLNQVKV 258
++F+NQ+++
Sbjct: 193 VVFINQIRM 201
>gi|444921804|ref|ZP_21241634.1| Protein RecA [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507077|gb|ELV07259.1| Protein RecA [Wohlfahrtiimonas chitiniclastica SH04]
Length = 350
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 140/197 (71%), Gaps = 8/197 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL+ AL Q+ FGK S++ FG + +STGSL LD+ALGIGGLP+GR
Sbjct: 5 KRKALQAALGQIDKQFGKGSVMR----FGDQTENTDIIPVSTGSLGLDIALGIGGLPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTL LH I EAQK GG A++D E+ALDP A +G+D ENL I+QPD
Sbjct: 61 IIEIYGPESSGKTTLTLHAIAEAQKAGGMAAFIDAEHALDPVYAAKLGVDVENLYISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+
Sbjct: 121 NGEQALEIADTLVRSGALDIVVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
++ +S+TL+IF+NQ+++
Sbjct: 181 NIKKSNTLVIFINQIRM 197
>gi|404368013|ref|ZP_10973372.1| protein recA [Fusobacterium ulcerans ATCC 49185]
gi|313690549|gb|EFS27384.1| protein recA [Fusobacterium ulcerans ATCC 49185]
Length = 363
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 142/199 (71%), Gaps = 7/199 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
++ +K+ AL LA+ Q+ DFG+ S++ L G + VISTGS+ LD ALG+GG+P
Sbjct: 12 EVSEKEKALELAMKQIKKDFGEGSIMKL----GDNQEMNIEVISTGSINLDAALGLGGVP 67
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VEIYG E+SGKTT+ALH+ EAQK GG A++D E+ALDP A+A+G+D + LLI+
Sbjct: 68 RGRVVEIYGAESSGKTTIALHIAAEAQKAGGIVAFIDAEHALDPVYAKALGVDVDELLIS 127
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + D L +SG++D I+VDSVAAL+PK EI + Q+R+M++ALRK
Sbjct: 128 QPDYGEQALEIADMLVRSGAVDAIIVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRK 187
Query: 239 IHYSLCQSHTLIIFLNQVK 257
+ +L +S T +IF+NQ++
Sbjct: 188 LTATLNKSKTTMIFINQIR 206
>gi|154253020|ref|YP_001413844.1| recA protein [Parvibaculum lavamentivorans DS-1]
gi|189039601|sp|A7HWA4.1|RECA_PARL1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|154156970|gb|ABS64187.1| recA protein [Parvibaculum lavamentivorans DS-1]
Length = 365
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L + +STGSL LD+ALGIGGLP+GRI+EI
Sbjct: 15 KKKALDAALSQIERSFGKGSIMRLGKNEQIVEIESVSTGSLGLDIALGIGGLPRGRIIEI 74
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL + EAQK GG CA++D E+ALDP A +G+ ++LLI+QPD+ E
Sbjct: 75 YGPESSGKTTLALQTVAEAQKSGGVCAFVDAEHALDPIYARKLGVQLDDLLISQPDTGEQ 134
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+V+DSVAAL PK E+ + Q+R+M+QALRK+ S+ +
Sbjct: 135 ALEIADTLVRSGAVDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTGSISK 194
Query: 246 SHTLIIFLNQVKV 258
S+T++IF+NQ+++
Sbjct: 195 SNTMVIFINQIRM 207
>gi|119383349|ref|YP_914405.1| recombinase A [Paracoccus denitrificans PD1222]
gi|119373116|gb|ABL68709.1| recA protein [Paracoccus denitrificans PD1222]
Length = 356
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 142/200 (71%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+D + K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLP
Sbjct: 10 NDKRSADKQKALDSALAQIERQFGKGSIMKLGADNPVAEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EI+G E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 70 KGRIIEIFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTASIGRSNCMVIFINQIRM 209
>gi|61097693|emb|CAI38691.1| recombinase A [Chromobacterium violaceum]
gi|61097695|emb|CAI38692.1| recombinase A [Chromobacterium violaceum]
gi|61097699|emb|CAI38694.1| recombinase A [Chromobacterium violaceum]
gi|61097705|emb|CAI38697.1| recombinase A [Chromobacterium violaceum]
gi|61097709|emb|CAI38699.1| recombinase A [Chromobacterium violaceum]
Length = 285
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 135/183 (73%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 1 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 61 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 121 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 180
Query: 256 VKV 258
+++
Sbjct: 181 IRM 183
>gi|353732286|gb|AER13722.1| recombinase A, partial [Mesorhizobium sp. AN11]
Length = 193
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 135/191 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 3 KSVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 62
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 63 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 122
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 123 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 182
Query: 242 SLCQSHTLIIF 252
S+ +S+T++IF
Sbjct: 183 SISRSNTMVIF 193
>gi|61097689|emb|CAI28921.1| recombinase A [Chromobacterium violaceum]
gi|61097697|emb|CAI38693.1| recombinase A [Chromobacterium violaceum]
gi|61097711|emb|CAI38700.1| recombinase A [Chromobacterium violaceum]
Length = 285
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 135/183 (73%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 1 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 61 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 121 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 180
Query: 256 VKV 258
+++
Sbjct: 181 IRM 183
>gi|397905630|ref|ZP_10506474.1| RecA protein [Caloramator australicus RC3]
gi|397161313|emb|CCJ33809.1| RecA protein [Caloramator australicus RC3]
Length = 344
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 143/194 (73%), Gaps = 3/194 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
+K AL LA+SQ+ FGK S++ L S+ ISTGSL LD+ALGIGG+P+GRIV
Sbjct: 4 EKIKALELAISQIEKQFGKGSVMKLGE--NSKLNIEAISTGSLDLDIALGIGGVPRGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTT+ALH+I EAQKLGG A++D E+ALDP A+ +G+D ENL++AQPD+
Sbjct: 62 EIFGPESSGKTTVALHIIAEAQKLGGAAAFIDAEHALDPVYAKKLGVDIENLIVAQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG+IDVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ ++
Sbjct: 122 EQALEIAEALVRSGAIDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLAGAI 181
Query: 244 CQSHTLIIFLNQVK 257
+S + IF+NQ++
Sbjct: 182 NKSRCVAIFINQLR 195
>gi|167645357|ref|YP_001683020.1| recombinase A [Caulobacter sp. K31]
gi|189039593|sp|B0SZN2.1|RECA_CAUSK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|167347787|gb|ABZ70522.1| recA protein [Caulobacter sp. K31]
Length = 356
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 141/196 (71%), Gaps = 9/196 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V ISTGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEMESISTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTLALHV+ E QK GG A++D E+ALDP A +G++ +NLL++QPD
Sbjct: 72 VIEIYGPESSGKTTLALHVVAECQKAGGTAAFVDAEHALDPGYAFKLGVNLDNLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVIDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVK 257
S+ +++T++IF+NQ++
Sbjct: 192 SINKANTIVIFINQIR 207
>gi|347446589|dbj|BAK82138.1| recombination protein RecA [Calyptogena pacifica symbiont]
Length = 344
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 141/194 (72%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK+ AL+ AL+Q+ FGK S++ L +STGSL LD+ALGIGGLP+GR++E
Sbjct: 4 QKEQALKAALAQIDKQFGKGSVMFLGDDQAQSNIEAVSTGSLSLDIALGIGGLPRGRVIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ + ++ ++LLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIAEVQKLGGTAAFIDAEHALDPRYAKRLDVNTDDLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG +D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGGVDIVVIDSVAALAPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 245 QSHTLIIFLNQVKV 258
+++T++IF+NQ+++
Sbjct: 184 RTNTMVIFINQLRM 197
>gi|61097703|emb|CAI38696.1| recombinase A [Chromobacterium violaceum]
gi|61097713|emb|CAI38701.1| recombinase A [Chromobacterium violaceum]
Length = 285
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 135/183 (73%)
Query: 76 QLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTT 135
Q+ FGK S++ + + VISTGSL LDLALG+GGLP+GR+VEIYG E+SGKTT
Sbjct: 1 QIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDLALGVGGLPRGRVVEIYGPESSGKTT 60
Query: 136 LALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTK 195
L L + EAQKLGG CAY+D ENALDP A+ +G++ E+LLI+QPD+ E L + D L +
Sbjct: 61 LCLQAVAEAQKLGGTCAYIDAENALDPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVR 120
Query: 196 SGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
S +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +++TL+IF+NQ
Sbjct: 121 SSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQ 180
Query: 256 VKV 258
+++
Sbjct: 181 IRM 183
>gi|373499005|ref|ZP_09589500.1| protein recA [Fusobacterium sp. 12_1B]
gi|371959703|gb|EHO77380.1| protein recA [Fusobacterium sp. 12_1B]
Length = 345
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 142/199 (71%), Gaps = 7/199 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
++ +K+ AL LA+ Q+ DFG+ S++ L G + VISTGS+ LD ALG+GG+P
Sbjct: 12 EVSEKEKALELAMKQIKKDFGEGSIMKL----GDNQEMNIEVISTGSINLDAALGLGGVP 67
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VEIYG E+SGKTT+ALH+ EAQK GG A++D E+ALDP A+A+G+D + LLI+
Sbjct: 68 RGRVVEIYGAESSGKTTIALHIAAEAQKAGGIVAFIDAEHALDPVYAKALGVDVDELLIS 127
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + D L +SG++D I+VDSVAAL+PK EI + Q+R+M++ALRK
Sbjct: 128 QPDYGEQALEIADMLVRSGAVDAIIVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRK 187
Query: 239 IHYSLCQSHTLIIFLNQVK 257
+ +L +S T +IF+NQ++
Sbjct: 188 LTATLNKSKTTMIFINQIR 206
>gi|298103532|emb|CBH19577.1| recombinase A [Mesorhizobium sp. CMSS1]
Length = 188
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 134/185 (72%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GRI+EIYG E+SG
Sbjct: 4 ALSQIERAFGKGSIMRLGANEKIVEIETVPTGSLGLDIALGVGGLPRGRIIEIYGPESSG 63
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 64 KTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDT 123
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF
Sbjct: 124 LVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIF 183
Query: 253 LNQVK 257
+ Q++
Sbjct: 184 ITQIR 188
>gi|359407389|ref|ZP_09199866.1| protein RecA [SAR116 cluster alpha proteobacterium HIMB100]
gi|356677428|gb|EHI49772.1| protein RecA [SAR116 cluster alpha proteobacterium HIMB100]
Length = 357
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 141/197 (71%), Gaps = 8/197 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL A+ Q+ FGK S++ L G R V +STGSL LD+ALGIGG PKGR
Sbjct: 15 KSKALEAAIGQIEKAFGKGSVMKL----GQRDSVVDIQAVSTGSLGLDIALGIGGFPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQ GG CA++D E+ALDP+ A +G++ ++LLI+QPD
Sbjct: 71 IIEIYGPESSGKTTLALHAVAEAQAAGGNCAFVDAEHALDPTYARKLGVNLDDLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 131 AGEQALEIADTLVRSGAIDVLVIDSVAALVPRAELEGEMGDTHVGLHARLMSQALRKLTS 190
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+ L+IF+NQ+++
Sbjct: 191 SIARSNCLVIFINQIRL 207
>gi|269836955|ref|YP_003319183.1| recA protein [Sphaerobacter thermophilus DSM 20745]
gi|269786218|gb|ACZ38361.1| recA protein [Sphaerobacter thermophilus DSM 20745]
Length = 352
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 140/194 (72%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++D A+ LA++Q+ FGK S++ + + I TGS+ LDLALG+GG+P+GRI E
Sbjct: 3 ERDRAIELAMAQIERQFGKGSIMRMGEAESRLQIEAIPTGSIALDLALGVGGIPRGRITE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLA H+I EAQKLGG AY+D E+A DP AE GI ++LLI+QPD+ E
Sbjct: 63 IYGPESSGKTTLAQHIIAEAQKLGGVAAYIDAEHAFDPVYAERCGIKLDDLLISQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + +TL +SG++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 123 QALEICETLVRSGALDVIVIDSVAALVPRAEIDGDMGDAHVGLQARLMSQALRKLTGAIS 182
Query: 245 QSHTLIIFLNQVKV 258
+S T +IF+NQ+++
Sbjct: 183 RSRTAVIFINQLRM 196
>gi|403251213|ref|ZP_10917565.1| RecA/RadA recombinase [actinobacterium SCGC AAA027-L06]
gi|402915468|gb|EJX36439.1| RecA/RadA recombinase [actinobacterium SCGC AAA027-L06]
Length = 371
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 153/221 (69%), Gaps = 9/221 (4%)
Query: 40 NIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG- 98
N +++SA P+ D + +D + + +L AL+Q+ FGK S++ + G R+
Sbjct: 4 NKSTMASANREPQEDKK--EDKRSSDRAKSLDTALAQIERQFGKGSVMKM----GDRKAV 57
Query: 99 --PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
VI TGS+ LD+ALG+GGLP+GR+VEIYG E+SGKTT+ALH I AQK GG A++D
Sbjct: 58 AMEVIPTGSVALDIALGVGGLPRGRVVEIYGPESSGKTTVALHAIANAQKAGGIAAFIDA 117
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A+ +G+D + LL++QPD+ E L ++D L +SG+ID++VVDSVAAL+P+ EI
Sbjct: 118 EHALDPEYAKKLGVDIDALLVSQPDTGEQALEIMDMLVRSGAIDIVVVDSVAALVPRAEI 177
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
+ + Q+R+M+QALRK+ +L QS+T IF+NQ++
Sbjct: 178 EGEMGDSHMGLQARLMSQALRKMTGALHQSNTTAIFINQLR 218
>gi|430760747|ref|YP_007216604.1| RecA protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430010371|gb|AGA33123.1| RecA protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 347
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 141/200 (70%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+DA + AL AL Q+ FGK +++ + R VISTGSL LD+ALGIGGLP
Sbjct: 2 EDAVDENRKKALAAALGQIERQFGKGAVMRMGDGTAVRDVEVISTGSLALDVALGIGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VE+YG E+SGKTTL L V+ E QKLGG A++D E+ALDP A+ +G+ + LLI+
Sbjct: 62 RGRVVEVYGPESSGKTTLTLQVVAECQKLGGTAAFIDAEHALDPGYAQKLGVKVDELLIS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK
Sbjct: 122 QPDTGEQALEIADMLVRSGAVDLVVVDSVAALTPKAEIEGEMGDAHVGLQARLMSQALRK 181
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ ++ +S+TL++F+NQ+++
Sbjct: 182 LTANIKRSNTLVVFINQIRM 201
>gi|374281846|gb|AEZ04926.1| recombinase A, partial [Rhizobium etli]
gi|374281862|gb|AEZ04934.1| recombinase A, partial [Rhizobium etli]
gi|374281878|gb|AEZ04942.1| recombinase A, partial [Rhizobium etli]
Length = 188
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 133/188 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFL 253
S+ ++IF+
Sbjct: 181 SNCMVIFI 188
>gi|317059497|ref|ZP_07923982.1| recombinase A [Fusobacterium sp. 3_1_5R]
gi|313685173|gb|EFS22008.1| recombinase A [Fusobacterium sp. 3_1_5R]
Length = 359
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+ ++ DFG+ +++ L + VI TGSL LD ALG+GG+P+GR+VEI
Sbjct: 14 KQKALETAVKEITKDFGEGAIMKLGDN-SHMQIEVIPTGSLNLDAALGLGGVPRGRVVEI 72
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+A+G+D + LLI+QPD E
Sbjct: 73 YGAESSGKTTIALHIIAEAQKMGGIAAFIDAEHALDPVYAKALGVDIDELLISQPDFGEQ 132
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDVIVVDSVAAL+PK EI ++ Q+R+M++ALRK+ +L +
Sbjct: 133 ALDIADTLVRSGAIDVIVVDSVAALVPKVEIDGEMSDQQMGLQARLMSKALRKLTATLNK 192
Query: 246 SHTLIIFLNQVK 257
S T +IF+NQ++
Sbjct: 193 SKTTMIFINQIR 204
>gi|298103530|emb|CBH19576.1| recombinase A [Mesorhizobium sp. CMSS27]
Length = 187
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 134/185 (72%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GRI+EIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGANEKIVEIETVPTGSLGLDIALGVGGLPRGRIIEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF
Sbjct: 123 LVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIF 182
Query: 253 LNQVK 257
+ Q++
Sbjct: 183 ITQIR 187
>gi|340027698|ref|ZP_08663761.1| recombinase A [Paracoccus sp. TRP]
Length = 356
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 143/200 (71%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+D + K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLP
Sbjct: 10 NDKRSADKQKALDSALAQIERQFGKGSIMRLGADSPVAEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+E++G E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ ++LLI+
Sbjct: 70 KGRIIEVFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDDLLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTASIGRSNCMVIFINQIRM 209
>gi|339055914|ref|ZP_08648510.1| RecA protein [gamma proteobacterium IMCC2047]
gi|330720883|gb|EGG99071.1| RecA protein [gamma proteobacterium IMCC2047]
Length = 343
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 140/195 (71%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL +ALSQ+ FGK S++ R R P ISTGSL LD+ALGIGGLPKGRI+
Sbjct: 5 KQRALDMALSQIDKQFGKGSVM---RMGDQERPNVPAISTGSLGLDIALGIGGLPKGRII 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L I EAQK GG A++D E+ALDP A+ +G+D +NLL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLQAIAEAQKAGGTAAFIDAEHALDPDYAQKIGVDVDNLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 122 EQALEIADALVRSGAVDILVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKMTGNV 181
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 182 KRSNCMVIFINQIRM 196
>gi|312797180|ref|YP_004030102.1| recombinase A [Burkholderia rhizoxinica HKI 454]
gi|312168955|emb|CBW75958.1| RecA protein [Burkholderia rhizoxinica HKI 454]
Length = 376
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL ALSQ+ FGK S++ L V+STGSL LD+ALG+GGLP+GR+VE
Sbjct: 36 EKSKALAAALSQIEKQFGKGSIMRLGHGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVVE 95
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI E QK+GG CA++D E+ALD A +G++A LLI+QPD+ E
Sbjct: 96 IYGPESSGKTTLTLQVIAEMQKIGGTCAFIDAEHALDVQYASKLGVNASELLISQPDTGE 155
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M+QALRK+ ++
Sbjct: 156 QALEIADALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIK 215
Query: 245 QSHTLIIFLNQVKV 258
+++ L+IF+NQ+++
Sbjct: 216 RTNCLVIFINQIRM 229
>gi|310777953|ref|YP_003966286.1| recA protein [Ilyobacter polytropus DSM 2926]
gi|309747276|gb|ADO81938.1| recA protein [Ilyobacter polytropus DSM 2926]
Length = 353
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 143/199 (71%), Gaps = 7/199 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLP 118
+I KD AL +A+ Q+ DFG+ S++ L G+ ISTGS+ +D+ALG+GG+P
Sbjct: 7 EIADKDKALEVAMKQIQKDFGEGSIMKL----GANTHMNVETISTGSIGIDMALGLGGVP 62
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GR+VEIYG E+ GKTT+ALH++ EAQK GG A++D E+ALDP+ A A+G+D + LLI+
Sbjct: 63 RGRVVEIYGAESCGKTTVALHIVAEAQKKGGIAAFIDAEHALDPAYARALGVDVDELLIS 122
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG++DVIVVDSVAAL+PK EI + Q+R+M++ALRK
Sbjct: 123 QPDNGEQALEIGDMLVRSGAVDVIVVDSVAALVPKSEIEGEMGDQQMGLQARLMSKALRK 182
Query: 239 IHYSLCQSHTLIIFLNQVK 257
+ SL +S T +IF+NQ++
Sbjct: 183 LTGSLNKSKTTMIFINQIR 201
>gi|315917818|ref|ZP_07914058.1| recombinase A [Fusobacterium gonidiaformans ATCC 25563]
gi|313691693|gb|EFS28528.1| recombinase A [Fusobacterium gonidiaformans ATCC 25563]
Length = 359
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A+ ++ DFG+ +++ L + VI TGSL LD ALG+GG+P+GR+VEI
Sbjct: 14 KQKALETAVKEITKDFGEGAIMKLGDN-SHMQIEVIPTGSLNLDAALGLGGVPRGRVVEI 72
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQK+GG A++D E+ALDP A+A+G+D + LLI+QPD E
Sbjct: 73 YGAESSGKTTIALHIIAEAQKMGGIAAFIDAEHALDPVYAKALGVDIDELLISQPDFGEQ 132
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDVIVVDSVAAL+PK EI ++ Q+R+M++ALRK+ +L +
Sbjct: 133 ALDIADTLVRSGAIDVIVVDSVAALVPKVEIDGEMSDQQMGLQARLMSKALRKLTATLNK 192
Query: 246 SHTLIIFLNQVK 257
S T +IF+NQ++
Sbjct: 193 SKTTMIFINQIR 204
>gi|113866572|ref|YP_725061.1| recombinase A [Ralstonia eutropha H16]
gi|339324718|ref|YP_004684411.1| recombinase A [Cupriavidus necator N-1]
gi|123134402|sp|Q0KE78.1|RECA_CUPNH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|113525348|emb|CAJ91693.1| Recobination protein RecA [Ralstonia eutropha H16]
gi|338164875|gb|AEI75930.1| protein RecA [Cupriavidus necator N-1]
Length = 354
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 143/206 (69%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ L + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEVEKDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD S A +G++
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVSYANKLGVNV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+LLI+QPD+ E L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M
Sbjct: 121 GDLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+QALRK+ ++ +++ L+IF+NQ+++
Sbjct: 181 SQALRKLTGTIKRTNCLVIFINQIRM 206
>gi|237747401|ref|ZP_04577881.1| recA protein [Oxalobacter formigenes HOxBLS]
gi|229378752|gb|EEO28843.1| recA protein [Oxalobacter formigenes HOxBLS]
Length = 353
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 144/203 (70%), Gaps = 3/203 (1%)
Query: 59 DDAKIM---QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIG 115
DD K +K+ AL +AL+Q+ FGK S++ + PV+STGSL LD+ALG+G
Sbjct: 2 DDNKTASNPEKNKALAIALAQIEKQFGKGSVMRMAPGVVVEEIPVVSTGSLGLDIALGVG 61
Query: 116 GLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENL 175
GLP+GR++EIYG E+SGKTTL L VI E QKLGG CA++D E+ALD A+ +G+ ++L
Sbjct: 62 GLPRGRVIEIYGPESSGKTTLTLQVIAEMQKLGGTCAFIDAEHALDVGYAQKLGVHLQDL 121
Query: 176 LIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQA 235
LI+QPD+ E L + D L +SG++D+IV+DSVAAL PK EI + Q+R+M+QA
Sbjct: 122 LISQPDTGEQALEITDALVRSGAVDLIVIDSVAALTPKAEIEGDMGDSLPGLQARLMSQA 181
Query: 236 LRKIHYSLCQSHTLIIFLNQVKV 258
LRK+ S+ +++T +IF+NQ+++
Sbjct: 182 LRKLTGSINKTNTSVIFINQIRM 204
>gi|420153910|ref|ZP_14660842.1| RecA protein [Actinomyces massiliensis F0489]
gi|394756320|gb|EJF39421.1| RecA protein [Actinomyces massiliensis F0489]
Length = 400
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 138/199 (69%), Gaps = 5/199 (2%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLP 118
AK + AL AL+Q+ FGK S++ R R PV I TGS LD+ALGIGGLP
Sbjct: 4 AKTQDRSKALATALAQIDKSFGKGSVM---RLGDETRPPVAVIPTGSTALDVALGIGGLP 60
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D +NLL++
Sbjct: 61 RGRIVEIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDNLLVS 120
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG +D+IVVDSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 121 QPDTGEQALEITDMLIRSGGLDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 180
Query: 239 IHYSLCQSHTLIIFLNQVK 257
I +L + T IF+NQ++
Sbjct: 181 ITGALSATGTTAIFINQLR 199
>gi|345862875|ref|ZP_08815089.1| protein RecA [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345876718|ref|ZP_08828482.1| putative RecA protein [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344226217|gb|EGV52556.1| putative RecA protein [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345126217|gb|EGW56083.1| protein RecA [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 342
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 137/190 (72%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL AL Q+ FGK S++ + R ISTGSL LD+ALG+GGLPKGR+VEIYG
Sbjct: 8 ALSAALGQIEKQFGKGSVMRMGDSGSIRNIEAISTGSLGLDIALGVGGLPKGRVVEIYGP 67
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTL L V+ EAQK GG CA++D E+ALDP AE +G++ + LL++QPD+ E L
Sbjct: 68 ESSGKTTLTLQVVAEAQKQGGTCAFIDAEHALDPIYAEKIGVNVDELLVSQPDTGEQALE 127
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ D L +SG++DV+V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +++
Sbjct: 128 ITDMLVRSGAVDVVVIDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLTANIKRTNC 187
Query: 249 LIIFLNQVKV 258
L+IF+NQ+++
Sbjct: 188 LVIFINQIRM 197
>gi|296393357|ref|YP_003658241.1| recA protein [Segniliparus rotundus DSM 44985]
gi|296180504|gb|ADG97410.1| recA protein [Segniliparus rotundus DSM 44985]
Length = 346
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 141/197 (71%), Gaps = 1/197 (0%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKG 120
A+ + ++ AL LALSQ+ FGK S++ L S+ VI TGS+ LD+ALGIGGLPKG
Sbjct: 2 AQALDRNKALELALSQIDKSFGKGSVMRLGDQ-ASQPIAVIPTGSIALDVALGIGGLPKG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTT+ALH + AQ GG A++D E+ALDP A+ +G+D ENLL++QP
Sbjct: 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPEYAKKLGVDTENLLVSQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 121 DTGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMT 180
Query: 241 YSLCQSHTLIIFLNQVK 257
+L S T IF+NQ++
Sbjct: 181 GALNNSGTTAIFINQLR 197
>gi|333985518|ref|YP_004514728.1| recombinase A [Methylomonas methanica MC09]
gi|333809559|gb|AEG02229.1| Protein recA [Methylomonas methanica MC09]
Length = 351
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 140/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK S++ + SR V+STGSL LD+ALG+GGLP+GR++EI
Sbjct: 5 KKKALGAALMQIEKQFGKGSVMRMGDVAASRDIEVVSTGSLSLDIALGVGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I + QKLGG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQTIAQMQKLGGTAAFVDAEHALDPVYAEKIGVNIDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQLRM 197
>gi|387127527|ref|YP_006296132.1| recombinase A [Methylophaga sp. JAM1]
gi|386274589|gb|AFI84487.1| RecA protein [Methylophaga sp. JAM1]
Length = 346
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 139/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ L R +STGS+ LD+ALGIGGLP+GR+VE
Sbjct: 4 NKKKALGAALGQIEKQFGKGAVMRLGDGTAHRDIDAVSTGSIGLDVALGIGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I E QKLGG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKLGGTAAFVDAEHALDPLYAEKLGVNIDDLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 245 QSHTLIIFLNQVKV 258
+S+TL+IF+NQ+++
Sbjct: 184 RSNTLVIFINQIRM 197
>gi|297528253|gb|ADI46162.1| recombination protein A, partial [Rhizobium sp. CCBAU 05003]
Length = 180
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 131/178 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L ISTGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL
Sbjct: 1 FGKGSVMKLGSNENVVEIETISTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DTL +SG++D
Sbjct: 61 IAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 178
>gi|255689412|gb|ACU30054.1| RecA [Rhizobium borbori]
Length = 171
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 124/158 (78%)
Query: 100 VISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENA 159
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLALH I EAQK GG CA++D E+A
Sbjct: 14 TVSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHA 73
Query: 160 LDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVP 219
LDP A +G+D NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EIG
Sbjct: 74 LDPIYARKLGVDLHNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIGGE 133
Query: 220 INGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
+ Q+R+M+QALRK+ S+ +S+T++IF+NQ++
Sbjct: 134 MGESLPGLQARLMSQALRKLTASISKSNTMVIFINQIR 171
>gi|406967497|gb|EKD92563.1| hypothetical protein ACD_28C00403G0006 [uncultured bacterium]
Length = 335
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ LALSQ+ FGK S++ L S + ISTGSL LDLALG GG+PKGRIVEI
Sbjct: 6 KKKAIELALSQIEKSFGKGSIMRLGES-KSIQVETISTGSLSLDLALG-GGIPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHVI E QK GY A++D E+ALDP A+ +G+D +NLLI+QPD+ E
Sbjct: 64 YGPESSGKTTLALHVIAEVQKNKGYAAFIDAEHALDPDYAKKIGVDVDNLLISQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +S ++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEITETLVRSNAVDVIVIDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLTAAISK 183
Query: 246 SHTLIIFLNQVK 257
S +IF+NQ++
Sbjct: 184 SKVTVIFINQIR 195
>gi|322379036|ref|ZP_08053439.1| recombinase A [Helicobacter suis HS1]
gi|321148528|gb|EFX43025.1| recombinase A [Helicobacter suis HS1]
Length = 341
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 142/197 (72%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGR 121
QK AL LA+ Q+ FGK +++ L G + V STGSL LD+ALGIGG+PKGR
Sbjct: 4 QKQKALELAIKQIDKQFGKGALMRL----GDKEVEHIEVTSTGSLGLDMALGIGGVPKGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTL LH+I +AQ+ GG CA++D E+ALD A+ +G+D +NLLI+QPD
Sbjct: 60 IVEVYGPESSGKTTLTLHIIAQAQREGGTCAFIDAEHALDVQYAKKLGVDTDNLLISQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +++TL +SG++DVIVVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 120 TGEEALEILETLARSGAVDVIVVDSVAALTPRAEIEGDMGDQHVGLQARLMSQALRKITG 179
Query: 242 SLCQSHTLIIFLNQVKV 258
L + +T +IF+NQ+++
Sbjct: 180 ILHKMNTTLIFINQIRM 196
>gi|398849140|ref|ZP_10605905.1| protein RecA [Pseudomonas sp. GM84]
gi|398244726|gb|EJN30268.1| protein RecA [Pseudomonas sp. GM84]
Length = 355
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQGIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|383470429|gb|AFH35538.1| RecA protein, partial [Rhizobium gallicum bv. gallicum]
gi|383470433|gb|AFH35540.1| RecA protein, partial [Rhizobium gallicum bv. gallicum]
Length = 183
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 131/178 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L ISTGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL
Sbjct: 1 FGKGSVMKLGSNENVVEIETISTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DTL +SG++D
Sbjct: 61 IAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 178
>gi|383470427|gb|AFH35537.1| RecA protein, partial [Rhizobium tropici]
gi|383470435|gb|AFH35541.1| RecA protein, partial [Rhizobium tropici]
Length = 183
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 131/178 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L +STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL
Sbjct: 1 FGKGSVMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DTL +SG+ID
Sbjct: 61 IAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAID 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 178
>gi|347446578|dbj|BAK82130.1| recombination protein RecA [Calyptogena phaseoliformis symbiont]
Length = 344
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 140/194 (72%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK AL+ L+Q+ FGK S++ L + TGSL LD+ALGIGGLP+GR++E
Sbjct: 4 QKKQALKATLAQIDKQFGKGSVMFLGDDQAQSDIEAVFTGSLSLDIALGIGGLPRGRVIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI E QKLGG A++D E+ALDP A+ +G++ ++LLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHVIAEVQKLGGTAAFIDAEHALDPRYAKRLGVNTDDLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SGS+D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEITDMLVRSGSVDIVVIDSVAALTPKAEIEGEMGASHMGLQARLMSQALRKLTSNIK 183
Query: 245 QSHTLIIFLNQVKV 258
+++T++IF+NQ+++
Sbjct: 184 RTNTMVIFINQLRM 197
>gi|347527908|ref|YP_004834655.1| recombinase A [Sphingobium sp. SYK-6]
gi|345136589|dbj|BAK66198.1| protein RecA [Sphingobium sp. SYK-6]
Length = 364
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 143/201 (71%), Gaps = 7/201 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGL 117
A M++ AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALGIGGL
Sbjct: 19 AGTMERQKALEAALAQIDRAFGKGSAMRL----GSKETMQIEAISTGSLGLDIALGIGGL 74
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRI+EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ + L++
Sbjct: 75 PRGRIIEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKLGVNIDELIV 134
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +S +IDV+V+DSVAAL+P+ EI + + Q+R+M+QALR
Sbjct: 135 SQPDTGEQALEIADTLVRSNAIDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALR 194
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S ++IF+NQV++
Sbjct: 195 KLTGSISRSRCMVIFINQVRM 215
>gi|421522612|ref|ZP_15969253.1| recombinase A [Pseudomonas putida LS46]
gi|402753712|gb|EJX14205.1| recombinase A [Pseudomonas putida LS46]
Length = 356
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 6 KKRALAAALGQIERQFGKGAVMRMGDH--ERQGIPAISTGSLGLDIALGIGGLPKGRIVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 124 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 183
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 184 NANCLVIFINQIRM 197
>gi|402819550|ref|ZP_10869118.1| hypothetical protein IMCC14465_03520 [alpha proteobacterium
IMCC14465]
gi|402511697|gb|EJW21958.1| hypothetical protein IMCC14465_03520 [alpha proteobacterium
IMCC14465]
Length = 363
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 138/193 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
++ AL AL Q+ ++GK S++ L I TGSL LD+ALGIGGLP+GRI+EI
Sbjct: 15 RNKALEAALGQIERNYGKGSVMKLGDPKNIVEIGSIPTGSLGLDIALGIGGLPQGRIIEI 74
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G D E LLI+QPD+ E
Sbjct: 75 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPLYASKLGADVEELLISQPDNGEQ 134
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+V+DSVAAL P+ E+ + Q+R+M+QALRK+ S+ +
Sbjct: 135 ALEIADTLVRSGAIDVLVIDSVAALTPRAELEGDMGDSLPGLQARLMSQALRKLTASISK 194
Query: 246 SHTLIIFLNQVKV 258
S+T++IF+NQ+++
Sbjct: 195 SNTMVIFINQIRM 207
>gi|420151065|ref|ZP_14658215.1| RecA protein [Actinomyces georgiae F0490]
gi|394772829|gb|EJF51746.1| RecA protein [Actinomyces georgiae F0490]
Length = 361
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 139/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL++ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALQVALSQIDKQFGKGSVM---RLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EIYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 193 SATGTTAIFINQLR 206
>gi|198283178|ref|YP_002219499.1| recA protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665991|ref|YP_002425407.1| recA protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|226723623|sp|B5EQ47.1|RECA_ACIF5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226737749|sp|B7J7A9.1|RECA_ACIF2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|198247699|gb|ACH83292.1| recA protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518204|gb|ACK78790.1| recA protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 345
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 137/194 (70%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 QRSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIEVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q GG A++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIASCQAAGGTAAFIDAEHALDPGYAHKLGVDLENLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIS 183
Query: 245 QSHTLIIFLNQVKV 258
+++TL+IF+NQ+++
Sbjct: 184 RTNTLVIFINQIRM 197
>gi|442805655|ref|YP_007373804.1| protein RecA [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442741505|gb|AGC69194.1| protein RecA [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 345
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL + SQ+ FGK +++ L VI TG+L LD+ALG+GGLP+GRIVE
Sbjct: 5 EKKKALEMVFSQIEKQFGKGAIMKLGEA-AHMNIDVIPTGALGLDIALGVGGLPRGRIVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E+SGKTT+ALHVI EAQK GG A++D E+ALDP A+A+G++ ENL+++QPD+ E
Sbjct: 64 IFGPESSGKTTVALHVIAEAQKAGGEAAFIDAEHALDPVYAKALGVNIENLIVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG+IDVIV+DSVAAL+PK EI + Y Q+R+M+QALRK+ +
Sbjct: 124 QALEIAEALVRSGAIDVIVIDSVAALVPKAEIDGEMGEQYVGLQARLMSQALRKLSGVIS 183
Query: 245 QSHTLIIFLNQVK 257
+S T+ IF+NQ++
Sbjct: 184 KSRTVAIFINQLR 196
>gi|374281842|gb|AEZ04924.1| recombinase A, partial [Rhizobium etli]
gi|374281848|gb|AEZ04927.1| recombinase A, partial [Rhizobium etli]
gi|374281850|gb|AEZ04928.1| recombinase A, partial [Rhizobium sp. HBR7]
gi|374281876|gb|AEZ04941.1| recombinase A, partial [Rhizobium sp. HBR23]
gi|374281880|gb|AEZ04943.1| recombinase A, partial [Rhizobium sp. HBR26]
gi|374281882|gb|AEZ04944.1| recombinase A, partial [Rhizobium sp. HBR31]
gi|374281886|gb|AEZ04946.1| recombinase A, partial [Rhizobium sp. HBR50]
gi|374281888|gb|AEZ04947.1| recombinase A, partial [Rhizobium etli]
Length = 188
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 133/188 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFL 253
S+ ++IF+
Sbjct: 181 SNCMVIFI 188
>gi|209571809|gb|ACI62757.1| recombinase A, partial [Bradyrhizobium yuanmingense]
gi|242263496|gb|ACS89044.1| recombinase A [Bradyrhizobium yuanmingense]
Length = 185
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 136/185 (73%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIVEIYG
Sbjct: 1 ALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIVEIYGP 60
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L
Sbjct: 61 ESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALE 120
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T
Sbjct: 121 ICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINKSNT 180
Query: 249 LIIFL 253
++IF+
Sbjct: 181 MVIFI 185
>gi|26988361|ref|NP_743786.1| recombinase A [Pseudomonas putida KT2440]
gi|148549294|ref|YP_001269396.1| recombinase A [Pseudomonas putida F1]
gi|386013498|ref|YP_005931775.1| recombinase A [Pseudomonas putida BIRD-1]
gi|395444994|ref|YP_006385247.1| recombinase A [Pseudomonas putida ND6]
gi|397697716|ref|YP_006535599.1| Protein recA [Pseudomonas putida DOT-T1E]
gi|37537942|sp|Q88ME4.1|RECA_PSEPK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220669|sp|A5W7V2.1|RECA_PSEP1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|24983113|gb|AAN67250.1|AE016352_3 recA protein [Pseudomonas putida KT2440]
gi|148513352|gb|ABQ80212.1| RecA protein [Pseudomonas putida F1]
gi|313500204|gb|ADR61570.1| RecA [Pseudomonas putida BIRD-1]
gi|388558991|gb|AFK68132.1| recombinase A [Pseudomonas putida ND6]
gi|397334446|gb|AFO50805.1| Protein recA [Pseudomonas putida DOT-T1E]
Length = 355
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQGIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|406367622|gb|AFS44253.1| recombinase A, partial [Bradyrhizobium genosp. ETH1]
Length = 188
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 136/188 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEICDTLVRSGAVDVMVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLII 251
+S+T++I
Sbjct: 181 NKSNTMVI 188
>gi|365824587|ref|ZP_09366661.1| recA [Actinomyces graevenitzii C83]
gi|365259647|gb|EHM89632.1| recA [Actinomyces graevenitzii C83]
Length = 394
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 142/205 (69%), Gaps = 11/205 (5%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLAL 112
++P D AK AL LAL+Q+ +FGK S++ R R PV I TGS+ LD+AL
Sbjct: 4 NQPQDRAK------ALSLALAQIDKNFGKGSVM---RLGDDTRPPVAVIPTGSVALDVAL 54
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A +G+D
Sbjct: 55 GVGGLPRGRVVEIYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPEYARKLGVDV 114
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+NLL++QPD+ E L + D L +SG +D+IV+DSVAAL+PK EI + + Q+R+M
Sbjct: 115 DNLLVSQPDTGEQALEIADMLIRSGGLDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLM 174
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVK 257
+QALRKI +L + T IF+NQ++
Sbjct: 175 SQALRKITGALSATGTTAIFINQLR 199
>gi|298205324|gb|ADI61873.1| recombinase protein A [Mesorhizobium sp. JS9]
Length = 183
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 132/178 (74%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L S STGSL LD+ALG+GGLP+GRIVEIYG E+SGKTT+ALH
Sbjct: 1 FGKGSVMRLGANEKSVEIETASTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTMALHT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG++D
Sbjct: 61 VAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 178
>gi|150390420|ref|YP_001320469.1| recA protein [Alkaliphilus metalliredigens QYMF]
gi|149950282|gb|ABR48810.1| recA protein [Alkaliphilus metalliredigens QYMF]
Length = 347
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 143/195 (73%), Gaps = 3/195 (1%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRI 122
M+K AL +A+SQ+ FGK S++ L S+ ISTGS+ LD+A+GIGG+P+GR+
Sbjct: 1 MEKKKALDVAISQIEKQFGKGSIMKLGE--DSKLSLECISTGSIDLDVAIGIGGVPRGRV 58
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTT++LH+I EAQK GG A++D E+ALDP A +G+D ENL+++QPD+
Sbjct: 59 VEIYGPESSGKTTVSLHIIAEAQKNGGSAAFIDAEHALDPIYARKLGVDTENLIVSQPDT 118
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ S
Sbjct: 119 GEQALEIAEALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGS 178
Query: 243 LCQSHTLIIFLNQVK 257
+ +S+T IF+NQ++
Sbjct: 179 INKSNTTAIFINQLR 193
>gi|415975305|ref|ZP_11558834.1| recombinase A [Acidithiobacillus sp. GGI-221]
gi|339833935|gb|EGQ61735.1| recombinase A [Acidithiobacillus sp. GGI-221]
Length = 357
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 137/194 (70%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ AL ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 16 QRSKALSAALSQIDKQFGKGAVMRLGDHNAIKDIEVYSTGSLGLDLALGVGGLPRGRVVE 75
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q GG A++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 76 IYGPESSGKTTLTLHAIASCQAAGGTAAFIDAEHALDPGYAHKLGVDLENLLISQPDTGE 135
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 136 QALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIS 195
Query: 245 QSHTLIIFLNQVKV 258
+++TL+IF+NQ+++
Sbjct: 196 RTNTLVIFINQIRM 209
>gi|20178057|sp|Q9APB2.1|RECA_CUPNE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|12659037|gb|AAK01164.1|AF312928_1 RecA [Cupriavidus necator]
Length = 353
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 141/206 (68%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ L + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD A +G+D
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
NLLI+QPD+ E L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M
Sbjct: 121 GNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+Q LRK+ ++ +++ L+IF+NQ+++
Sbjct: 181 SQGLRKLTGTIKRTNCLVIFINQIRM 206
>gi|374281894|gb|AEZ04950.1| recombinase A, partial [Rhizobium sp. HBR33]
gi|374281898|gb|AEZ04952.1| recombinase A, partial [Rhizobium sp. HBR52]
Length = 188
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 132/188 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFL 253
S ++IF+
Sbjct: 181 SKCMVIFI 188
>gi|114569557|ref|YP_756237.1| recA protein [Maricaulis maris MCS10]
gi|114340019|gb|ABI65299.1| RecA protein [Maricaulis maris MCS10]
Length = 359
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 141/199 (70%), Gaps = 1/199 (0%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K M K+ A+ ALSQ+ FGK S++ L + + ISTGSL LD+ALGIGGLPK
Sbjct: 11 NEKNMDKEKAIEAALSQIDKAFGKGSVMKLGQKP-AMEIETISTGSLGLDIALGIGGLPK 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLALH + EAQK GG A++D E+ALDP A +G+D LLI+Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHTVAEAQKAGGVAAFVDAEHALDPVYAGKLGVDLGELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+ID++V+DSVAAL P+ E+ + Q+R+M+QALRK+
Sbjct: 130 PDTGEQALEIADTLVRSGAIDILVIDSVAALTPRAELEGEMGDSLPGLQARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S L+IF+NQ+++
Sbjct: 190 TGSISKSKCLVIFINQIRM 208
>gi|3219852|sp|P95469.1|RECA_PARDE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|1825468|gb|AAB51561.1| recA [Paracoccus denitrificans]
Length = 356
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 141/200 (70%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
+D + K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLP
Sbjct: 10 NDKRSADKQKALDSALAQIERQFGKGSIMKLGADNPVAEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EI+G E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 70 KGRIIEIFGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL SG++ ++VVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVASGAVSLVVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTASIGRSNCMVIFINQIRM 209
>gi|229588727|ref|YP_002870846.1| recombinase A [Pseudomonas fluorescens SBW25]
gi|259563341|sp|C3KDG0.1|RECA_PSEFS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|229360593|emb|CAY47450.1| recombinase A [Pseudomonas fluorescens SBW25]
Length = 352
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|388471152|ref|ZP_10145361.1| RecA protein [Pseudomonas synxantha BG33R]
gi|388007849|gb|EIK69115.1| RecA protein [Pseudomonas synxantha BG33R]
Length = 352
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|170723191|ref|YP_001750879.1| recombinase A [Pseudomonas putida W619]
gi|229619922|sp|B1JDA2.1|RECA_PSEPW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|169761194|gb|ACA74510.1| recA protein [Pseudomonas putida W619]
Length = 355
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERTGIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKSGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|320094021|ref|ZP_08025846.1| recombination protein A [Actinomyces sp. oral taxon 178 str. F0338]
gi|319979065|gb|EFW10583.1| recombination protein A [Actinomyces sp. oral taxon 178 str. F0338]
Length = 375
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 139/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL++ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 30 RNKALQVALSQIDKQFGKGSVM---RLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVI 86
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 87 EIYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 146
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 147 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 206
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 207 SATGTTAIFINQLR 220
>gi|408483477|ref|ZP_11189696.1| recombinase A [Pseudomonas sp. R81]
gi|423690263|ref|ZP_17664783.1| RecA protein [Pseudomonas fluorescens SS101]
gi|387998220|gb|EIK59549.1| RecA protein [Pseudomonas fluorescens SS101]
Length = 352
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|387892385|ref|YP_006322682.1| recombinase A [Pseudomonas fluorescens A506]
gi|387160632|gb|AFJ55831.1| RecA protein [Pseudomonas fluorescens A506]
Length = 352
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|333899523|ref|YP_004473396.1| protein recA [Pseudomonas fulva 12-X]
gi|333114788|gb|AEF21302.1| Protein recA [Pseudomonas fulva 12-X]
Length = 349
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLQVIAEAQKAGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|1092932|prf||2102240A recA gene
Length = 352
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|387129198|ref|YP_006292088.1| recombinase A [Methylophaga sp. JAM7]
gi|386270487|gb|AFJ01401.1| RecA protein [Methylophaga sp. JAM7]
Length = 347
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 141/194 (72%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+ AL +AL Q+ FGK +++ L +R +STGS+ LD+ALGIGGLP+GR++E
Sbjct: 4 NRKKALGVALGQIEKQFGKGAVMRLGDGSAARDIEAVSTGSIGLDVALGIGGLPRGRVIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I E QK+GG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIAEMQKMGGTAAFVDAEHALDPLYAEKLGVNIDDLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADMLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIK 183
Query: 245 QSHTLIIFLNQVKV 258
+S+TL+IF+NQ+++
Sbjct: 184 RSNTLVIFINQIRM 197
>gi|66044626|ref|YP_234467.1| recombinase A [Pseudomonas syringae pv. syringae B728a]
gi|289674623|ref|ZP_06495513.1| recombinase A [Pseudomonas syringae pv. syringae FF5]
gi|302187192|ref|ZP_07263865.1| recombinase A [Pseudomonas syringae pv. syringae 642]
gi|422616512|ref|ZP_16685218.1| recombinase A [Pseudomonas syringae pv. japonica str. M301072]
gi|422628272|ref|ZP_16693481.1| recombinase A [Pseudomonas syringae pv. pisi str. 1704B]
gi|422638246|ref|ZP_16701677.1| recombinase A [Pseudomonas syringae Cit 7]
gi|422671183|ref|ZP_16730549.1| recombinase A [Pseudomonas syringae pv. aceris str. M302273]
gi|424066571|ref|ZP_17804035.1| recA protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|424071225|ref|ZP_17808651.1| recA protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|440720448|ref|ZP_20900866.1| recombinase A [Pseudomonas syringae BRIP34876]
gi|440726576|ref|ZP_20906829.1| recombinase A [Pseudomonas syringae BRIP34881]
gi|440744167|ref|ZP_20923471.1| recombinase A [Pseudomonas syringae BRIP39023]
gi|443644969|ref|ZP_21128819.1| Recombinase RecA [Pseudomonas syringae pv. syringae B64]
gi|76363338|sp|Q4ZWP3.1|RECA_PSEU2 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|63255333|gb|AAY36429.1| RecA protein [Pseudomonas syringae pv. syringae B728a]
gi|298157248|gb|EFH98333.1| RecA protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330896096|gb|EGH28317.1| recombinase A [Pseudomonas syringae pv. japonica str. M301072]
gi|330936774|gb|EGH40938.1| recombinase A [Pseudomonas syringae pv. pisi str. 1704B]
gi|330950641|gb|EGH50901.1| recombinase A [Pseudomonas syringae Cit 7]
gi|330968923|gb|EGH68989.1| recombinase A [Pseudomonas syringae pv. aceris str. M302273]
gi|407999158|gb|EKG39545.1| recA protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|408002170|gb|EKG42433.1| recA protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|429843318|gb|AGA16514.1| RecA [Pseudomonas syringae pv. syringae]
gi|429843324|gb|AGA16517.1| RecA [Pseudomonas syringae pv. syringae]
gi|440365973|gb|ELQ03060.1| recombinase A [Pseudomonas syringae BRIP34876]
gi|440366158|gb|ELQ03243.1| recombinase A [Pseudomonas syringae BRIP34881]
gi|440374181|gb|ELQ10917.1| recombinase A [Pseudomonas syringae BRIP39023]
gi|443284986|gb|ELS43991.1| Recombinase RecA [Pseudomonas syringae pv. syringae B64]
Length = 354
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|11387037|sp|Q9RDU0.1|RECA_PSETO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|6689065|emb|CAB65373.1| recombination enzyme [Pseudomonas tolaasii]
Length = 352
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|73540233|ref|YP_294753.1| recombinase A [Ralstonia eutropha JMP134]
gi|123760257|sp|Q475M4.1|RECA_CUPPJ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|72117646|gb|AAZ59909.1| RecA protein [Ralstonia eutropha JMP134]
Length = 353
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 142/206 (68%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ + + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGLSAEKQKALAAALSQIEKQFGKGSIMRMGDGEVEKDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD + A +G+D
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVNYASKLGVDV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
LLI+QPD+ E L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M
Sbjct: 121 GELLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+QALRK+ ++ +++ L+IF+NQ+++
Sbjct: 181 SQALRKLTGTIKRTNCLVIFINQIRM 206
>gi|254461098|ref|ZP_05074514.1| protein RecA [Rhodobacterales bacterium HTCC2083]
gi|206677687|gb|EDZ42174.1| protein RecA [Rhodobacteraceae bacterium HTCC2083]
Length = 351
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 138/193 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L ++ STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 9 KQKALDSALAQIERQFGKGSIMKLGDENAVQQIEATSTGSLGLDIALGIGGLPKGRIVEI 68
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH + E QK GG CA++D E+ALDP A+ +G+D + LLI+QPD+ E
Sbjct: 69 YGPESSGKTTLTLHTVAEEQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLISQPDTGEQ 128
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VDTL +SG++++IVVDSVAAL PK E+ + +R+M+QA+RK+ S+ +
Sbjct: 129 ALEIVDTLVRSGAVNMIVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSISR 188
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 189 SNCMVIFINQIRM 201
>gi|440737262|ref|ZP_20916834.1| recombinase A [Pseudomonas fluorescens BRIP34879]
gi|447915570|ref|YP_007396138.1| recombinase A [Pseudomonas poae RE*1-1-14]
gi|440382241|gb|ELQ18746.1| recombinase A [Pseudomonas fluorescens BRIP34879]
gi|445199433|gb|AGE24642.1| recombinase A [Pseudomonas poae RE*1-1-14]
Length = 352
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|395795704|ref|ZP_10475007.1| recombinase A [Pseudomonas sp. Ag1]
gi|421138316|ref|ZP_15598381.1| recA protein [Pseudomonas fluorescens BBc6R8]
gi|395340164|gb|EJF72002.1| recombinase A [Pseudomonas sp. Ag1]
gi|404510484|gb|EKA24389.1| recA protein [Pseudomonas fluorescens BBc6R8]
Length = 352
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|395496840|ref|ZP_10428419.1| recombinase A [Pseudomonas sp. PAMC 25886]
Length = 352
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|312959310|ref|ZP_07773827.1| RecA [Pseudomonas fluorescens WH6]
gi|311286027|gb|EFQ64591.1| RecA [Pseudomonas fluorescens WH6]
Length = 352
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|422645684|ref|ZP_16708819.1| recombinase A [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330959233|gb|EGH59493.1| recombinase A [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 354
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|110558997|gb|ABG75859.1| RecA [Agrobacterium rhizogenes]
Length = 188
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 131/187 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 2 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 62 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 122 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 181
Query: 242 SLCQSHT 248
S+ +S+T
Sbjct: 182 SISKSNT 188
>gi|266895|sp|Q01953.1|RECA_PSEFL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|151530|gb|AAA25980.1| putative [Pseudomonas fluorescens]
Length = 352
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|23465975|ref|NP_696578.1| recombinase A [Bifidobacterium longum NCC2705]
gi|239621261|ref|ZP_04664292.1| protein recA [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|30316236|sp|Q8G4G9.1|RECA_BIFLO RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|23326690|gb|AAN25214.1| RecA protein [Bifidobacterium longum NCC2705]
gi|239515722|gb|EEQ55589.1| protein recA [Bifidobacterium longum subsp. infantis CCUG 52486]
Length = 397
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 145/210 (69%), Gaps = 4/210 (1%)
Query: 48 AEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLK 107
A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TGSL
Sbjct: 8 AKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQP-EQNVEVIPTGSLA 63
Query: 108 LDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEA 167
LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A
Sbjct: 64 LDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARK 123
Query: 168 MGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA 227
+G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 124 LGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGL 183
Query: 228 QSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
Q+R+M+QALRK+ +L Q+ T IF+NQ++
Sbjct: 184 QARLMSQALRKMTGALAQAGTTAIFINQLR 213
>gi|296454323|ref|YP_003661466.1| recA protein [Bifidobacterium longum subsp. longum JDM301]
gi|296183754|gb|ADH00636.1| recA protein [Bifidobacterium longum subsp. longum JDM301]
Length = 397
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 145/210 (69%), Gaps = 4/210 (1%)
Query: 48 AEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLK 107
A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TGSL
Sbjct: 8 AKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQP-EQNVEVIPTGSLA 63
Query: 108 LDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEA 167
LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A
Sbjct: 64 LDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARK 123
Query: 168 MGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA 227
+G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 124 LGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGL 183
Query: 228 QSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
Q+R+M+QALRK+ +L Q+ T IF+NQ++
Sbjct: 184 QARLMSQALRKMTGALAQAGTTAIFINQLR 213
>gi|389876987|ref|YP_006370552.1| recombinase A [Tistrella mobilis KA081020-065]
gi|388527771|gb|AFK52968.1| RecA protein [Tistrella mobilis KA081020-065]
Length = 366
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 140/198 (70%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M K AL AL Q+ FGK S++ L G + V+ TGSL LD+ALG+GG P+G
Sbjct: 19 MDKQKALEAALGQIERAFGKGSVMKL----GQQEKVDVDVVPTGSLALDIALGVGGFPRG 74
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTTLALH I EAQ+ GG CA++D E+ALDPS A +G++ + L+I+QP
Sbjct: 75 RVIEIYGPESSGKTTLALHAIAEAQRGGGTCAFVDAEHALDPSYARKLGVNIDELVISQP 134
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+VVDSVAAL PK E+ + + Q+R+M+QALRK+
Sbjct: 135 DTGEQALEIADTLVRSGAIDVLVVDSVAALTPKAELEGEMGDSHVGLQARLMSQALRKLT 194
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 195 GSISRSRCVVIFINQIRM 212
>gi|422664940|ref|ZP_16724813.1| recombinase A [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330975359|gb|EGH75425.1| recombinase A [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 354
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|315604454|ref|ZP_07879520.1| recombination protein A [Actinomyces sp. oral taxon 180 str. F0310]
gi|315314160|gb|EFU62211.1| recombination protein A [Actinomyces sp. oral taxon 180 str. F0310]
Length = 363
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 193 SATGTTAIFINQLR 206
>gi|167032243|ref|YP_001667474.1| recombinase A [Pseudomonas putida GB-1]
gi|189039602|sp|B0KT20.1|RECA_PSEPG RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166858731|gb|ABY97138.1| recA protein [Pseudomonas putida GB-1]
Length = 355
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+G P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDQ--ERQGIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|393718758|ref|ZP_10338685.1| recombinase A [Sphingomonas echinoides ATCC 14820]
Length = 367
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 146/202 (72%), Gaps = 7/202 (3%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGG 116
D ++ AL AL+Q+ FGK S + L GS++ VISTGSL LD+ALG+GG
Sbjct: 20 DKATAERAKALEAALAQIDRAFGKGSAMKL----GSKQTMQVEVISTGSLGLDIALGVGG 75
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LP+GR++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G++ + L+
Sbjct: 76 LPRGRVIEIYGPESSGKTTLALHVIAEAQKGGGTAAFVDAEHALDPVYAKKLGVNIDELI 135
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
++QPD+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+L
Sbjct: 136 VSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSL 195
Query: 237 RKIHYSLCQSHTLIIFLNQVKV 258
RK+ S+ +S ++IF+NQ+++
Sbjct: 196 RKLTGSISRSRCMVIFINQLRM 217
>gi|410089203|ref|ZP_11285829.1| recombinase A [Pseudomonas viridiflava UASWS0038]
gi|409763490|gb|EKN48450.1| recombinase A [Pseudomonas viridiflava UASWS0038]
Length = 354
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|399058151|ref|ZP_10744422.1| protein RecA [Novosphingobium sp. AP12]
gi|398041199|gb|EJL34273.1| protein RecA [Novosphingobium sp. AP12]
Length = 357
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 150/215 (69%), Gaps = 9/215 (4%)
Query: 47 AAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVIST 103
AA++ + DA M + AL AL+Q+ FGK S + L GS+ IST
Sbjct: 2 AAQLKLIQEGKEKDA--MDRQKALEAALAQIDKAFGKGSAMKL----GSKETMQVEAIST 55
Query: 104 GSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPS 163
GSL LD+ALG+GGLP+GR++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP
Sbjct: 56 GSLGLDIALGVGGLPRGRVIEIYGPESSGKTTLALHVIAEAQKTGGTAAFIDAEHALDPV 115
Query: 164 LAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGM 223
A+ +G++ + L+++QPD+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI +
Sbjct: 116 YAKKLGVNIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDS 175
Query: 224 YSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+Q+LRK+ S+ +S ++IF+NQ+++
Sbjct: 176 HVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRM 210
>gi|374281896|gb|AEZ04951.1| recombinase A, partial [Agrobacterium tumefaciens]
gi|374281900|gb|AEZ04953.1| recombinase A, partial [Rhizobium sp. HBR75]
gi|374281902|gb|AEZ04954.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 188
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 131/188 (69%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D + LLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQGLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFL 253
S ++IF+
Sbjct: 181 SKCMVIFI 188
>gi|915212|gb|AAA73517.1| RecA [Gluconobacter oxydans]
Length = 344
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 142/196 (72%), Gaps = 7/196 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKG 120
M K AL ALSQ+ FGK S++ + G R + VISTGSL LD+ALGIGG+P+G
Sbjct: 1 MDKTKALEGALSQIERAFGKGSIMRM----GQRPKEQADVISTGSLGLDIALGIGGMPRG 56
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALHV+ EAQK GG A +D E+ALDP A +G++ + LL++QP
Sbjct: 57 RIVEIYGPESSGKTTLALHVLAEAQKKGGTVAVIDAEHALDPGYARKLGVNIDELLLSQP 116
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 117 DAGEQALEICDTLVRSGAVDVLVVDSVAALVPRRELEGDMGDSHVGLHARLMSQALRKLT 176
Query: 241 YSLCQSHTLIIFLNQV 256
++ +S+TL+IFLNQ+
Sbjct: 177 GTVSRSNTLVIFLNQM 192
>gi|344323348|gb|AEN14466.1| recombination protein A [Bradyrhizobium sp. CCBAU 23010]
Length = 183
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 133/178 (74%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L + S IS+GSL LD+ALG+GGLPKGR+VEIYG E+SGKTTLALH
Sbjct: 1 FGKGSVMKLGKNDRSMDVETISSGSLGLDIALGVGGLPKGRVVEIYGPESSGKTTLALHT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ E QK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DTL +SG++D
Sbjct: 61 VAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALEICDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +SHT++IF+NQ+++
Sbjct: 121 VLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLSASINKSHTMVIFINQIRM 178
>gi|393725026|ref|ZP_10344953.1| recombinase A [Sphingomonas sp. PAMC 26605]
Length = 358
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 145/197 (73%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
++ AL AL+Q+ FGK S + L GS++ VISTGSL LD+ALG+GGLP+GR
Sbjct: 15 ERAKALEAALAQIDRAFGKGSAMKL----GSKQTMQVEVISTGSLGLDIALGVGGLPRGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G++ + L+++QPD
Sbjct: 71 VIEIYGPESSGKTTLALHVIAEAQKTGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+
Sbjct: 131 TGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTG 190
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 191 SISRSRCMVIFINQLRM 207
>gi|373496208|ref|ZP_09586756.1| protein RecA [Fusobacterium sp. 12_1B]
gi|404368928|ref|ZP_10974275.1| protein RecA [Fusobacterium ulcerans ATCC 49185]
gi|371966119|gb|EHO83611.1| protein RecA [Fusobacterium sp. 12_1B]
gi|404288364|gb|EFS25058.2| protein RecA [Fusobacterium ulcerans ATCC 49185]
Length = 373
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 141/194 (72%), Gaps = 1/194 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K+ AL LA+ Q++ +FG S++ L S VISTGSL L++ALG+GG+P+GR++
Sbjct: 9 VSKEKALDLAIKQISKEFGDGSIMKLGDNL-SMHVEVISTGSLNLNMALGVGGVPRGRVI 67
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH++ EAQK GG A++D E+ALDP A+A+G+D + LLI+QPD
Sbjct: 68 EVYGAESSGKTTIALHIVAEAQKAGGIAAFIDAEHALDPVYAKALGVDVDELLISQPDYG 127
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++D+IVVDSVAAL+PK EI + Q+R+M++ALRK+ SL
Sbjct: 128 EQALEIADMLVRSNAVDIIVVDSVAALVPKVEIDGEMGDQQMGLQARLMSKALRKLTASL 187
Query: 244 CQSHTLIIFLNQVK 257
+S T ++F+NQ++
Sbjct: 188 NKSKTTMVFINQIR 201
>gi|71737127|ref|YP_275943.1| recombinase A [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257487044|ref|ZP_05641085.1| recombinase A [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289625999|ref|ZP_06458953.1| recombinase A [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289651485|ref|ZP_06482828.1| recombinase A [Pseudomonas syringae pv. aesculi str. 2250]
gi|416025760|ref|ZP_11569408.1| recombinase A [Pseudomonas syringae pv. glycinea str. race 4]
gi|422404655|ref|ZP_16481706.1| recombinase A [Pseudomonas syringae pv. glycinea str. race 4]
gi|422583750|ref|ZP_16658870.1| recombinase A [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422594838|ref|ZP_16669128.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422609003|ref|ZP_16680962.1| recombinase A [Pseudomonas syringae pv. mori str. 301020]
gi|422679969|ref|ZP_16738242.1| recombinase A [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|123747565|sp|Q48F94.1|RECA_PSE14 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|71557680|gb|AAZ36891.1| recA protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320329643|gb|EFW85632.1| recombinase A [Pseudomonas syringae pv. glycinea str. race 4]
gi|330868577|gb|EGH03286.1| recombinase A [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330878036|gb|EGH12185.1| recombinase A [Pseudomonas syringae pv. glycinea str. race 4]
gi|330894630|gb|EGH27291.1| recombinase A [Pseudomonas syringae pv. mori str. 301020]
gi|330985145|gb|EGH83248.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331009316|gb|EGH89372.1| recombinase A [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 354
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|406367582|gb|AFS44233.1| recombinase A, partial [Bradyrhizobium genosp. TUXTLAS-23]
gi|406367602|gb|AFS44243.1| recombinase A, partial [Bradyrhizobium genosp. TUXTLAS-23]
Length = 188
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 135/187 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHTLI 250
+S+T++
Sbjct: 182 NKSNTMV 188
>gi|210622626|ref|ZP_03293286.1| hypothetical protein CLOHIR_01234 [Clostridium hiranonis DSM 13275]
gi|210154127|gb|EEA85133.1| hypothetical protein CLOHIR_01234 [Clostridium hiranonis DSM 13275]
Length = 361
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 141/193 (73%), Gaps = 1/193 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL ++ DFGK S++ L S ISTGS+ LD+A+GIGGLPKGRIVE
Sbjct: 6 EKLKALNEALGKIEKDFGKGSVMRLGEAT-SLEIDTISTGSIGLDIAIGIGGLPKGRIVE 64
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH + EAQK GG A++D E+ALDP A+A+G+D ENL+I+QPD+ E
Sbjct: 65 IYGPESSGKTTVALHCVAEAQKDGGIAAFIDAEHALDPVYAKALGVDVENLIISQPDTGE 124
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG+ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 125 QALEIAEALIRSGAIDIIVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGSIK 184
Query: 245 QSHTLIIFLNQVK 257
+S+ + IF+NQ++
Sbjct: 185 KSNCVAIFINQLR 197
>gi|28871176|ref|NP_793795.1| recA protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969154|ref|ZP_03397293.1| recombinase A [Pseudomonas syringae pv. tomato T1]
gi|301383952|ref|ZP_07232370.1| recombinase A [Pseudomonas syringae pv. tomato Max13]
gi|302064162|ref|ZP_07255703.1| recombinase A [Pseudomonas syringae pv. tomato K40]
gi|302134752|ref|ZP_07260742.1| recombinase A [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422297521|ref|ZP_16385156.1| recA protein [Pseudomonas avellanae BPIC 631]
gi|422586984|ref|ZP_16661655.1| recombinase A [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|422654855|ref|ZP_16717583.1| recombinase A [Pseudomonas syringae pv. actinidiae str. M302091]
gi|422657794|ref|ZP_16720233.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M302278]
gi|37537940|sp|Q87XY7.1|RECA_PSESM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|28854426|gb|AAO57490.1| recA protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213926152|gb|EEB59708.1| recombinase A [Pseudomonas syringae pv. tomato T1]
gi|330872692|gb|EGH06841.1| recombinase A [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330967904|gb|EGH68164.1| recombinase A [Pseudomonas syringae pv. actinidiae str. M302091]
gi|331016403|gb|EGH96459.1| recombinase A [Pseudomonas syringae pv. lachrymans str. M302278]
gi|407991049|gb|EKG32993.1| recA protein [Pseudomonas avellanae BPIC 631]
Length = 354
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|237800182|ref|ZP_04588643.1| recombinase A [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023039|gb|EGI03096.1| recombinase A [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 354
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|311692219|dbj|BAJ25724.1| recombinase A [Rhizobium sp. I132]
gi|311692221|dbj|BAJ25725.1| recombinase A [Rhizobium sp. I213]
gi|311692223|dbj|BAJ25726.1| recombinase A [Rhizobium sp. I231]
gi|311692225|dbj|BAJ25727.1| recombinase A [Rhizobium sp. I312]
gi|311692229|dbj|BAJ25729.1| recombinase A [Rhizobium sp. I314]
gi|311692235|dbj|BAJ25732.1| recombinase A [Rhizobium sp. O123]
gi|311692237|dbj|BAJ25733.1| recombinase A [Rhizobium sp. O312]
gi|311692241|dbj|BAJ25735.1| recombinase A [Rhizobium sp. T134]
Length = 186
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 132/186 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLII 251
S+T++I
Sbjct: 181 SNTMVI 186
>gi|322380801|ref|ZP_08054907.1| recombinase A [Helicobacter suis HS5]
gi|321146805|gb|EFX41599.1| recombinase A [Helicobacter suis HS5]
Length = 341
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 142/197 (72%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIGGLPKGR 121
QK AL LA+ Q+ FGK +++ L G + I STGSL LD+ALGIGG+PKGR
Sbjct: 4 QKQKALELAIKQIDKQFGKGALMRL----GDKEVEHIEATSTGSLGLDMALGIGGVPKGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTL LH+I +AQ+ GG CA++D E+ALD A+ +G+D +NLLI+QPD
Sbjct: 60 IVEVYGPESSGKTTLTLHIIAQAQREGGTCAFIDAEHALDVQYAKKLGVDTDNLLISQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +++TL +SG++DVIVVDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 120 TGEEALEILETLARSGAVDVIVVDSVAALTPRAEIEGDMGDQHVGLQARLMSQALRKITG 179
Query: 242 SLCQSHTLIIFLNQVKV 258
L + +T +IF+NQ+++
Sbjct: 180 ILHKMNTTLIFINQIRM 196
>gi|372271417|ref|ZP_09507465.1| recombinase A [Marinobacterium stanieri S30]
Length = 347
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 140/195 (71%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
+ AL ALSQ+ FGK +++ R R P +STGSL LD+ALGIGGLP GR+V
Sbjct: 5 RKKALDAALSQIERQFGKGAVM---RMGDQPREAIPSVSTGSLGLDIALGIGGLPFGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI EAQK G CA++D E+ALDP AE +G+D + LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQKQGKTCAFVDAEHALDPVYAEKLGVDVDALLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D LT+SG++DVI+VDSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEITDMLTRSGAVDVIIVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSV 181
Query: 244 CQSHTLIIFLNQVKV 258
QS+ L++F+NQ+++
Sbjct: 182 KQSNCLLVFINQIRM 196
>gi|344323350|gb|AEN14467.1| recombination protein A [Bradyrhizobium sp. CCBAU 41134]
Length = 183
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 132/178 (74%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK SM+ L + S IS+GSL LD+ALG+GGLPKGR+VEIYG E+SGKTTLALH
Sbjct: 1 FGKGSMMKLGKNDRSMDVETISSGSLGLDIALGVGGLPKGRVVEIYGPESSGKTTLALHT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ E QK GG CA++D E+ALDP A +G+ + LLI+QPD+ E L + DTL +SG++D
Sbjct: 61 VAEGQKKGGICAFIDAEHALDPVYARKLGVYIDELLISQPDTGEQALEICDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +SHT++IF+NQ+++
Sbjct: 121 VLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINKSHTMVIFINQIRM 178
>gi|326389417|ref|ZP_08210984.1| recA protein [Thermoanaerobacter ethanolicus JW 200]
gi|345017684|ref|YP_004820037.1| protein recA [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940973|ref|ZP_10306617.1| protein RecA [Thermoanaerobacter siderophilus SR4]
gi|325994422|gb|EGD52847.1| recA protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033027|gb|AEM78753.1| Protein recA [Thermoanaerobacter wiegelii Rt8.B1]
gi|392292723|gb|EIW01167.1| protein RecA [Thermoanaerobacter siderophilus SR4]
Length = 341
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 144/195 (73%), Gaps = 1/195 (0%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +A+SQ+ FGK S++ L VI TGSL+LD+ALG+GG+P+GRI
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDT-AKLNVEVIPTGSLELDIALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTLALH+I EAQK+GG A++D E+ALDP A+ +G++ E+LL+AQPD+
Sbjct: 60 IEIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVK 257
+S T+++F+NQ++
Sbjct: 180 TSKSKTIVVFINQLR 194
>gi|213691840|ref|YP_002322426.1| recombinase A [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|384198983|ref|YP_005584726.1| recombinase RecA [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
gi|213523301|gb|ACJ52048.1| recA protein [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|320457935|dbj|BAJ68556.1| recombinase RecA [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
Length = 418
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 145/210 (69%), Gaps = 4/210 (1%)
Query: 48 AEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLK 107
A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TGSL
Sbjct: 29 AKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQP-EQNVEVIPTGSLA 84
Query: 108 LDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEA 167
LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A
Sbjct: 85 LDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARK 144
Query: 168 MGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA 227
+G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 145 LGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGL 204
Query: 228 QSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
Q+R+M+QALRK+ +L Q+ T IF+NQ++
Sbjct: 205 QARLMSQALRKMTGALAQAGTTAIFINQLR 234
>gi|46191337|ref|ZP_00206783.1| COG0468: RecA/RadA recombinase [Bifidobacterium longum DJO10A]
gi|189439147|ref|YP_001954228.1| recombinase A [Bifidobacterium longum DJO10A]
gi|227547654|ref|ZP_03977703.1| recombination protein A [Bifidobacterium longum subsp. longum ATCC
55813]
gi|317482460|ref|ZP_07941477.1| recA bacterial DNA recombination protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322689410|ref|YP_004209144.1| recombinase RecA [Bifidobacterium longum subsp. infantis 157F]
gi|322691377|ref|YP_004220947.1| recombinase RecA [Bifidobacterium longum subsp. longum JCM 1217]
gi|419846676|ref|ZP_14369904.1| RecA protein [Bifidobacterium longum subsp. longum 1-6B]
gi|419855760|ref|ZP_14378510.1| RecA protein [Bifidobacterium longum subsp. longum 44B]
gi|189427582|gb|ACD97730.1| RecA/RadA recombinase [Bifidobacterium longum DJO10A]
gi|227211909|gb|EEI79805.1| recombination protein A [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|316916120|gb|EFV37525.1| recA bacterial DNA recombination protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320456233|dbj|BAJ66855.1| recombinase RecA [Bifidobacterium longum subsp. longum JCM 1217]
gi|320460746|dbj|BAJ71366.1| recombinase RecA [Bifidobacterium longum subsp. infantis 157F]
gi|386413456|gb|EIJ28062.1| RecA protein [Bifidobacterium longum subsp. longum 1-6B]
gi|386414983|gb|EIJ29524.1| RecA protein [Bifidobacterium longum subsp. longum 44B]
Length = 418
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 145/210 (69%), Gaps = 4/210 (1%)
Query: 48 AEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLK 107
A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TGSL
Sbjct: 29 AKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQP-EQNVEVIPTGSLA 84
Query: 108 LDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEA 167
LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A
Sbjct: 85 LDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARK 144
Query: 168 MGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA 227
+G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 145 LGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGL 204
Query: 228 QSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
Q+R+M+QALRK+ +L Q+ T IF+NQ++
Sbjct: 205 QARLMSQALRKMTGALAQAGTTAIFINQLR 234
>gi|110558993|gb|ABG75857.1| RecA [Rhizobium tropici]
Length = 187
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 131/187 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHT 248
S+ +S+T
Sbjct: 181 SISKSNT 187
>gi|399524213|ref|ZP_10764781.1| RecA protein [Atopobium sp. ICM58]
gi|398374655|gb|EJN52233.1| RecA protein [Atopobium sp. ICM58]
Length = 363
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 193 SATGTTAIFINQLR 206
>gi|410447432|ref|ZP_11301528.1| RecA protein [SAR86 cluster bacterium SAR86E]
gi|409979707|gb|EKO36465.1| RecA protein [SAR86 cluster bacterium SAR86E]
Length = 339
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 139/196 (70%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
KD L ALSQ+ FGK +++ + G R P +STGSL LD+ALGIGGLPKGR+
Sbjct: 8 KDKNLNEALSQIEKQFGKGTVMKM----GDREIVDIPSVSTGSLGLDIALGIGGLPKGRV 63
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTTL L I E QK GG A++D E+ALDP+ AE +G+D + LL++QPD+
Sbjct: 64 VEIFGPESSGKTTLTLQAIAECQKAGGTAAFIDAEHALDPNYAEKLGVDVDELLLSQPDT 123
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L KSGS+D+IVVDSVAAL P+ EI + + Q+R+M+QALRKI +
Sbjct: 124 GEQALEVTDMLVKSGSVDLIVVDSVAALTPRAEIEGDMGDHHVGLQARLMSQALRKITGN 183
Query: 243 LCQSHTLIIFLNQVKV 258
+ +S+ ++IF+NQ+++
Sbjct: 184 IQRSNAMVIFINQIRM 199
>gi|416018035|ref|ZP_11565036.1| recombinase A [Pseudomonas syringae pv. glycinea str. B076]
gi|320323085|gb|EFW79174.1| recombinase A [Pseudomonas syringae pv. glycinea str. B076]
Length = 354
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKIGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIVVDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|384201328|ref|YP_005587075.1| recombinase RecA [Bifidobacterium longum subsp. longum KACC 91563]
gi|291516744|emb|CBK70360.1| RecA protein [Bifidobacterium longum subsp. longum F8]
gi|338754335|gb|AEI97324.1| recombinase RecA [Bifidobacterium longum subsp. longum KACC 91563]
Length = 418
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 145/210 (69%), Gaps = 4/210 (1%)
Query: 48 AEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLK 107
A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TGSL
Sbjct: 29 AKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQP-EQNVEVIPTGSLA 84
Query: 108 LDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEA 167
LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A
Sbjct: 85 LDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARK 144
Query: 168 MGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA 227
+G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 145 LGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGL 204
Query: 228 QSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
Q+R+M+QALRK+ +L Q+ T IF+NQ++
Sbjct: 205 QARLMSQALRKMTGALAQAGTTAIFINQLR 234
>gi|317050275|ref|YP_004111391.1| recA protein [Desulfurispirillum indicum S5]
gi|316945359|gb|ADU64835.1| recA protein [Desulfurispirillum indicum S5]
Length = 357
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 141/196 (71%), Gaps = 7/196 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGR 121
+K AL LA++Q+ GK S++ L GS P V+ +G+L LD+ALG+GG P+GR
Sbjct: 3 EKQKALELAIAQIEKAHGKGSIMRL----GSGEIPAIPVVPSGNLALDIALGVGGYPRGR 58
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTL+LH I EAQK+GG A++D ENA D A +GI+ E LL++QPD
Sbjct: 59 VIEIYGPESSGKTTLSLHAIAEAQKMGGTAAFIDAENAFDAMYARKIGINTEALLVSQPD 118
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
E+ L + DTL +SG+IDVIV+DSVAAL+PK E+ + AQ+R+M+QALRK+
Sbjct: 119 YGESALEIADTLVRSGAIDVIVIDSVAALVPKAELEGEMGEATMGAQARLMSQALRKLTG 178
Query: 242 SLCQSHTLIIFLNQVK 257
++ +SHT++IF+NQ++
Sbjct: 179 AINKSHTVVIFINQIR 194
>gi|198385739|gb|ACH86213.1| RecA [Phyllobacterium sp. T1018]
Length = 186
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 131/186 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L R + TGSL LD+ALG+GGLPKGR
Sbjct: 1 KSVDKTKALDAALSQIERAFGKGSIMRLGRNEQVVEIETVPTGSLSLDIALGVGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 61 IVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSH 247
S+ +S+
Sbjct: 181 SISRSN 186
>gi|158631780|gb|ABW74995.1| RecA [Mesorhizobium septentrionale]
Length = 169
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/163 (57%), Positives = 126/163 (77%)
Query: 96 RRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLD 155
RR + TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D
Sbjct: 2 RRDRTVPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVD 61
Query: 156 VENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCE 215
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ E
Sbjct: 62 AEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAE 121
Query: 216 IGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
I + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 122 IEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 164
>gi|396585089|ref|ZP_10485520.1| RecA protein [Actinomyces sp. ICM47]
gi|395547179|gb|EJG14669.1| RecA protein [Actinomyces sp. ICM47]
Length = 365
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 193 SATGTTAIFINQLR 206
>gi|167037603|ref|YP_001665181.1| recombinase A [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040264|ref|YP_001663249.1| recombinase A [Thermoanaerobacter sp. X514]
gi|256750811|ref|ZP_05491696.1| recA protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300914348|ref|ZP_07131664.1| recA protein [Thermoanaerobacter sp. X561]
gi|307724416|ref|YP_003904167.1| recA protein [Thermoanaerobacter sp. X513]
gi|320116018|ref|YP_004186177.1| recA protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166854504|gb|ABY92913.1| recA protein [Thermoanaerobacter sp. X514]
gi|166856437|gb|ABY94845.1| recA protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256750394|gb|EEU63413.1| recA protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889283|gb|EFK84429.1| recA protein [Thermoanaerobacter sp. X561]
gi|307581477|gb|ADN54876.1| recA protein [Thermoanaerobacter sp. X513]
gi|319929109|gb|ADV79794.1| recA protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 341
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 144/195 (73%), Gaps = 1/195 (0%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +A+SQ+ FGK S++ L VI TGSL+LD+ALG+GG+P+GRI
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDT-AKLNVEVIPTGSLELDIALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTLALH+I EAQK+GG A++D E+ALDP A+ +G++ E+LL+AQPD+
Sbjct: 60 IEIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVK 257
+S T+++F+NQ++
Sbjct: 180 TSKSKTIVVFINQLR 194
>gi|289578367|ref|YP_003476994.1| recA protein [Thermoanaerobacter italicus Ab9]
gi|297544644|ref|YP_003676946.1| recA protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|289528080|gb|ADD02432.1| recA protein [Thermoanaerobacter italicus Ab9]
gi|296842419|gb|ADH60935.1| recA protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 341
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 144/195 (73%), Gaps = 1/195 (0%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +A+SQ+ FGK S++ L VI TGSL+LD+ALG+GG+P+GRI
Sbjct: 1 MIEKQKALEMAISQIERQFGKGSIMRLGDT-AKLNVEVIPTGSLELDIALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTLALH+I EAQK+GG A++D E+ALDP A+ +G++ E+LL+AQPD+
Sbjct: 60 IEIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVK 257
+S T+++F+NQ++
Sbjct: 180 TSKSKTIVVFINQLR 194
>gi|158631778|gb|ABW74994.1| RecA [Mesorhizobium sp. CCBAU 83282]
Length = 169
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/163 (57%), Positives = 126/163 (77%)
Query: 96 RRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLD 155
RR + TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D
Sbjct: 2 RRDRTVPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVD 61
Query: 156 VENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCE 215
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ E
Sbjct: 62 AEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAE 121
Query: 216 IGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
I + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 122 IEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 164
>gi|332981390|ref|YP_004462831.1| recA protein [Mahella australiensis 50-1 BON]
gi|332699068|gb|AEE96009.1| recA protein [Mahella australiensis 50-1 BON]
Length = 345
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 146/195 (74%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+M+K++AL ALSQ+ FGK S++ L VI TGSL LD+ALG+GG+P+GR+
Sbjct: 1 MMEKEHALETALSQIEKRFGKGSIMKLGDDTARLNVEVIPTGSLSLDIALGVGGVPRGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTT+ALH++ +AQK+GG A++D E+ALDP+ A+ +G++ ++LL++QPD+
Sbjct: 61 VEIFGPESSGKTTVALHIVAQAQKIGGTAAFIDAEHALDPAYAKRLGVNIDDLLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG++DV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIAEALVRSGAVDVVVIDSVAALVPQAEIDGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 243 LCQSHTLIIFLNQVK 257
+ +S ++ IF+NQ++
Sbjct: 181 ISKSKSVAIFINQLR 195
>gi|386817726|ref|ZP_10104944.1| Protein recA [Thiothrix nivea DSM 5205]
gi|386422302|gb|EIJ36137.1| Protein recA [Thiothrix nivea DSM 5205]
Length = 347
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL Q+ FGK +++ + R VISTGSL LD+ALGIGGLPKGR+VEI
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDTNAIRDVDVISTGSLTLDIALGIGGLPKGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK GG A++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAECQKQGGTAAFVDAEHALDPIYAQKLGVNVDDLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGAVDIVVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTGNIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|399006173|ref|ZP_10708701.1| protein RecA [Pseudomonas sp. GM17]
gi|425897877|ref|ZP_18874468.1| RecA protein [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397892204|gb|EJL08682.1| RecA protein [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|398122632|gb|EJM12218.1| protein RecA [Pseudomonas sp. GM17]
Length = 350
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIV+DSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVIDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|389683198|ref|ZP_10174530.1| RecA protein [Pseudomonas chlororaphis O6]
gi|388552711|gb|EIM15972.1| RecA protein [Pseudomonas chlororaphis O6]
Length = 350
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVIV+DSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIVIDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|371782149|emb|CCE46141.1| recombinase A, partial [Agrobacterium tumefaciens]
Length = 246
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 132/185 (71%)
Query: 74 LSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGK 133
LSQ+ FGK S++ L +STGSL LD+ALGIGGLP+GRIVEIYG E+SGK
Sbjct: 1 LSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPRGRIVEIYGPESSGK 60
Query: 134 TTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTL 193
TTLAL I E QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DTL
Sbjct: 61 TTLALQTIAECQKKGGICAFVDAEHALDPIYARKLGVDLQNLLISQPDTGEQALEITDTL 120
Query: 194 TKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFL 253
+SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S ++IF+
Sbjct: 121 VRSGAVDILVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKCMVIFI 180
Query: 254 NQVKV 258
NQ+++
Sbjct: 181 NQIRM 185
>gi|217969145|ref|YP_002354379.1| recombinase A [Thauera sp. MZ1T]
gi|217506472|gb|ACK53483.1| recA protein [Thauera sp. MZ1T]
Length = 345
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + R +STGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 KAKALSAALSQIEKQFGKGSIMRMGDGSIERDIQTVSTGSLGLDIALGLGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QKLGG A++D E+ALD AE +G+D E+LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDVGYAEKLGVDIEDLLISQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +D++V+DSVAAL PK EI + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEIADMLVRSGGVDIVVIDSVAALTPKAEIEGEMGDQLPGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
++TL+IF+NQ+++
Sbjct: 185 TNTLVIFINQIRM 197
>gi|283456289|ref|YP_003360853.1| RecA protein [Bifidobacterium dentium Bd1]
gi|306822508|ref|ZP_07455886.1| recombination protein A [Bifidobacterium dentium ATCC 27679]
gi|309801448|ref|ZP_07695575.1| RecA protein [Bifidobacterium dentium JCVIHMP022]
gi|283102923|gb|ADB10029.1| RecA protein [Bifidobacterium dentium Bd1]
gi|304554053|gb|EFM41962.1| recombination protein A [Bifidobacterium dentium ATCC 27679]
gi|308221963|gb|EFO78248.1| RecA protein [Bifidobacterium dentium JCVIHMP022]
Length = 386
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 140/198 (70%), Gaps = 11/198 (5%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP-----VISTGSLKLDLALGIGGLPK 119
++ AL AL+Q+ +FGK S + L G R P VI TGSL LD+ALGIGGLPK
Sbjct: 23 RRQAALETALAQVEKNFGKGSAMRL----GDR--PEQDVEVIPTGSLALDMALGIGGLPK 76
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVEIYG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++Q
Sbjct: 77 GRIVEIYGPESSGKTTLALHVVANAQKKGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQ 136
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 137 PDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKM 196
Query: 240 HYSLCQSHTLIIFLNQVK 257
+L Q+ T IF+NQ++
Sbjct: 197 TGALAQAGTTAIFINQLR 214
>gi|312132580|ref|YP_003999919.1| reca [Bifidobacterium longum subsp. longum BBMN68]
gi|311773522|gb|ADQ03010.1| RecA [Bifidobacterium longum subsp. longum BBMN68]
Length = 418
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 145/210 (69%), Gaps = 4/210 (1%)
Query: 48 AEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLK 107
A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TGSL
Sbjct: 29 AKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQP-EQNVEVIPTGSLA 84
Query: 108 LDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEA 167
LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A
Sbjct: 85 LDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVSAYIDAEHALDPAYARK 144
Query: 168 MGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA 227
+G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI + +
Sbjct: 145 LGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGL 204
Query: 228 QSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
Q+R+M+QALRK+ +L Q+ T IF+NQ++
Sbjct: 205 QARLMSQALRKMTGALAQAGTTAIFINQLR 234
>gi|300122439|emb|CBK23010.2| Recombinase A protein (RecA) [Blastocystis hominis]
Length = 398
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 139/195 (71%), Gaps = 7/195 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL+ A+ QL FGK S++ L GS+ PVISTGSL +D ALGIGGLP+GRI
Sbjct: 46 KELALKNAIKQLETQFGKGSVMKL----GSKSHLDVPVISTGSLTVDHALGIGGLPRGRI 101
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTLALH + E QK GG C ++D E+ALDP A +G++ +L I+QPDS
Sbjct: 102 VEIYGPESSGKTTLALHTVAELQKTGGTCTFIDAEHALDPLYASKIGVNINDLYISQPDS 161
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D+IVVDSVAAL+PK E + + Q+R+M+QALRKI S
Sbjct: 162 GEQALEIADCLVRSGAMDMIVVDSVAALVPKAEAEGNMGDAHMALQARLMSQALRKITGS 221
Query: 243 LCQSHTLIIFLNQVK 257
L +S+ L+IF+NQ++
Sbjct: 222 LSRSNCLLIFINQIR 236
>gi|417942042|ref|ZP_12585319.1| Protein RecA (Recombinase A) [Bifidobacterium breve CECT 7263]
gi|376167427|gb|EHS86263.1| Protein RecA (Recombinase A) [Bifidobacterium breve CECT 7263]
Length = 416
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 140/196 (71%), Gaps = 7/196 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGR 121
++ AL AL+Q+ +FGK S + L G + VI TGSL LD+ALGIGGLPKGR
Sbjct: 44 KRKAALDTALAQVEKNFGKGSAMRL----GDQPVQNVEVIPTGSLALDMALGIGGLPKGR 99
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD
Sbjct: 100 IVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPD 159
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 160 NGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTG 219
Query: 242 SLCQSHTLIIFLNQVK 257
+L Q+ T IF+NQ++
Sbjct: 220 ALAQAGTTAIFINQLR 235
>gi|373502103|gb|AEY75268.1| recombinase A, partial [Sinorhizobium americanum]
Length = 182
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 135/182 (74%), Gaps = 8/182 (4%)
Query: 81 FGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTL 136
FGK S++ L GS+ V +STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTL
Sbjct: 3 FGKGSIMKL----GSKDSVVEIETVSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTL 58
Query: 137 ALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKS 196
AL + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +S
Sbjct: 59 ALQTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDTLVRS 118
Query: 197 GSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQV 256
G+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF+NQ+
Sbjct: 119 GAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISKSNCMVIFINQI 178
Query: 257 KV 258
++
Sbjct: 179 RM 180
>gi|194477062|ref|YP_002049241.1| recombinase A [Paulinella chromatophora]
gi|171192069|gb|ACB43031.1| recombinase A [Paulinella chromatophora]
Length = 367
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 141/200 (70%), Gaps = 2/200 (1%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
DD+ + +D AL LSQ+ +FGK S++ L R ISTG+L LDLALG GG P
Sbjct: 8 DDSHVENRDKALSSVLSQIERNFGKGSIMRLGDAT-RMRVETISTGALTLDLALG-GGYP 65
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGR+VEIYG E+SGKTTL LH I E Q+ GG A++D E+ALDP A A+G+D ENLLI+
Sbjct: 66 KGRVVEIYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAAALGVDIENLLIS 125
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VD L +SG+ID++V+DSVAAL P+ EI + + +Q+R+M+QA+RK
Sbjct: 126 QPDTGEMALEIVDQLVRSGAIDIVVIDSVAALTPRAEIEGEMGDVAMGSQARLMSQAMRK 185
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
I ++ +S +IFLNQ+++
Sbjct: 186 ITGNIGKSGCTVIFLNQLRL 205
>gi|170781613|ref|YP_001709945.1| recombinase A [Clavibacter michiganensis subsp. sepedonicus]
gi|169156181|emb|CAQ01323.1| recombinase A [Clavibacter michiganensis subsp. sepedonicus]
Length = 405
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 140/204 (68%), Gaps = 5/204 (2%)
Query: 56 EPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALG 113
E H A ++ +L AL+Q+ FGK S++ R R PV I TGS+ LD+ALG
Sbjct: 40 EEHPMASSADREKSLETALAQIDRQFGKGSVM---RLGSDERAPVAVIPTGSVALDVALG 96
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
IGGLP+GRIVEIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A+ +G+D +
Sbjct: 97 IGGLPRGRIVEIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPEYAKKLGVDID 156
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
LL++QPD+ E L + D L +SGSID++V+DSVAAL+P+ EI + + Q+R+M+
Sbjct: 157 ALLVSQPDTGEQALEIADMLVRSGSIDLVVIDSVAALVPRAEIEGEMGDSHVGLQARLMS 216
Query: 234 QALRKIHYSLCQSHTLIIFLNQVK 257
QALRK+ L Q+ T +IF+NQ++
Sbjct: 217 QALRKLTGGLNQTQTTMIFINQLR 240
>gi|313112840|ref|ZP_07798487.1| protein RecA [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624910|gb|EFQ08218.1| protein RecA [Faecalibacterium cf. prausnitzii KLE1255]
Length = 393
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +AL AL+Q+ FGK +++ L S + ISTGSL LDLALG+GG+P+GRI+E+
Sbjct: 22 KKDALATALAQIEKQFGKGAVMKLGDN-ASMQVDAISTGSLGLDLALGVGGVPRGRIIEV 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH++ EAQK GG A++DVE+ALDP+ AEA+G+D NLL++QPD+ E
Sbjct: 81 YGPESSGKTTLALHILAEAQKQGGEVAFIDVEHALDPTYAEALGVDINNLLVSQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
+ + + L +SG+ID IVVDSVAA++P+ EI + + Q+R+M+QA+RK+ + +
Sbjct: 141 AMEICEALVRSGAIDAIVVDSVAAMVPRAEIEGEMGDSHVGLQARLMSQAMRKLTSVIGK 200
Query: 246 SHTLIIFLNQVK 257
++T+ +F+NQ++
Sbjct: 201 TNTVCVFINQLR 212
>gi|160942862|ref|ZP_02090101.1| hypothetical protein FAEPRAM212_00338 [Faecalibacterium prausnitzii
M21/2]
gi|158445763|gb|EDP22766.1| RecA protein [Faecalibacterium prausnitzii M21/2]
Length = 391
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +AL AL+Q+ FGK +++ L S + ISTGSL LDLALG+GG+P+GRI+E+
Sbjct: 21 KKDALATALAQIEKQFGKGAVMKLGDN-ASMQVDAISTGSLGLDLALGVGGVPRGRIIEV 79
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH++ EAQK GG A++DVE+ALDP+ AEA+G+D NLL++QPD+ E
Sbjct: 80 YGPESSGKTTLALHILAEAQKKGGEVAFIDVEHALDPTYAEALGVDINNLLVSQPDTGEQ 139
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
+ + + L +SG+ID IVVDSVAA++P+ EI + + Q+R+M+QA+RK+ + +
Sbjct: 140 AMEICEALVRSGAIDAIVVDSVAAMVPRAEIEGEMGDSHVGLQARLMSQAMRKLTSVIGK 199
Query: 246 SHTLIIFLNQVK 257
++T+ +F+NQ++
Sbjct: 200 TNTVCVFINQLR 211
>gi|227495813|ref|ZP_03926124.1| recombination protein A [Actinomyces urogenitalis DSM 15434]
gi|226834635|gb|EEH67018.1| recombination protein A [Actinomyces urogenitalis DSM 15434]
Length = 399
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 139/199 (69%), Gaps = 5/199 (2%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLP 118
A+ + AL ALSQ+ FGK S++ R R PV I TGS+ LD+ALG+GGLP
Sbjct: 4 AQTQDRSKALATALSQIDKAFGKGSVM---RLGDDTRPPVSVIPTGSIALDVALGVGGLP 60
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRI+EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D +NLL++
Sbjct: 61 RGRIIEIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDNLLVS 120
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG +D+IV+DSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 121 QPDTGEQALEIADMLIRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 180
Query: 239 IHYSLCQSHTLIIFLNQVK 257
I +L + T IF+NQ++
Sbjct: 181 ITGALSATGTTAIFINQLR 199
>gi|293192297|ref|ZP_06609408.1| protein RecA [Actinomyces odontolyticus F0309]
gi|399526449|ref|ZP_10766228.1| RecA protein [Actinomyces sp. ICM39]
gi|292820212|gb|EFF79206.1| protein RecA [Actinomyces odontolyticus F0309]
gi|398363067|gb|EJN46717.1| RecA protein [Actinomyces sp. ICM39]
Length = 363
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 193 SATGTTAIFINQLR 206
>gi|339627937|ref|YP_004719580.1| recA protein [Sulfobacillus acidophilus TPY]
gi|379007570|ref|YP_005257021.1| protein recA [Sulfobacillus acidophilus DSM 10332]
gi|339285726|gb|AEJ39837.1| recA protein [Sulfobacillus acidophilus TPY]
gi|361053832|gb|AEW05349.1| Protein recA [Sulfobacillus acidophilus DSM 10332]
Length = 343
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 142/194 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M ++ AL LAL+Q+ FGK S++ L + VI TG + LDLA+G+GGLP+GR+V
Sbjct: 3 MDREKALDLALAQIEKQFGKGSIMRLGQESTRTAIDVIPTGCITLDLAMGVGGLPRGRVV 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG+E+SGKTT+ALH I EAQK GG A++DVE+ALDP A +G++ ++LLI+QPD+
Sbjct: 63 EIYGQESSGKTTIALHAIAEAQKGGGVAAFIDVEHALDPLYASKLGVNLDDLLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG++D++V+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 123 EQALEIAEALVRSGAVDIVVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAI 182
Query: 244 CQSHTLIIFLNQVK 257
+S T+ +F+NQ++
Sbjct: 183 SKSRTIAVFINQLR 196
>gi|254419524|ref|ZP_05033248.1| protein RecA [Brevundimonas sp. BAL3]
gi|196185701|gb|EDX80677.1| protein RecA [Brevundimonas sp. BAL3]
Length = 359
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 141/192 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A++Q+ FGK S++ L + + P +STGSL LD+ALGIGGLP+GR++E+
Sbjct: 16 KQRALEAAIAQIDRAFGKGSVMKLGKGGVADVIPSVSTGSLGLDMALGIGGLPRGRVIEV 75
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLALH + E QK GG A++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 76 FGPESSGKTTLALHTVAEVQKAGGTAAFVDAEHALDPGYAQKLGVNLDDLLVSQPDTGEQ 135
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VDTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 136 ALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 195
Query: 246 SHTLIIFLNQVK 257
S+ +++F+NQ++
Sbjct: 196 SNCIVLFINQIR 207
>gi|358350451|dbj|BAL15785.1| recombinase A protein, partial [Rhizobium sp. TSY03b]
gi|359334430|dbj|BAL37283.1| recombinase A protein, partial [Rhizobium sp. TSW01]
Length = 169
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 122/156 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLAL I EAQK GG CA++D E+AL
Sbjct: 14 VSTGSLSLDIALGIGGLPKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHAL 73
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI +
Sbjct: 74 DPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEM 133
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQV 256
Q+R+M+QALRK+ S+ +SHT++IF+NQ+
Sbjct: 134 GDSLPGLQARLMSQALRKLTASISKSHTMVIFINQI 169
>gi|295103957|emb|CBL01501.1| RecA protein [Faecalibacterium prausnitzii SL3/3]
Length = 391
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +AL AL+Q+ FGK +++ L S + ISTGSL LDLALG+GG+P+GRI+E+
Sbjct: 21 KKDALATALAQIEKQFGKGAVMKLGDN-ASMQVDAISTGSLGLDLALGVGGVPRGRIIEV 79
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH++ EAQK GG A++DVE+ALDP+ AEA+G+D NLL++QPD+ E
Sbjct: 80 YGPESSGKTTLALHILAEAQKKGGEVAFIDVEHALDPTYAEALGVDINNLLVSQPDTGEQ 139
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
+ + + L +SG+ID IVVDSVAA++P+ EI + + Q+R+M+QA+RK+ + +
Sbjct: 140 AMEICEALVRSGAIDAIVVDSVAAMVPRAEIEGEMGDSHVGLQARLMSQAMRKLTSVIGK 199
Query: 246 SHTLIIFLNQVK 257
++T+ +F+NQ++
Sbjct: 200 TNTVCVFINQLR 211
>gi|188591287|ref|YP_001795887.1| recombinase a [Cupriavidus taiwanensis LMG 19424]
gi|238692937|sp|B2AHB8.1|RECA_CUPTR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|170938181|emb|CAP63167.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Cupriavidus taiwanensis LMG 19424]
Length = 354
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 143/206 (69%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD+ +K AL ALSQ+ FGK S++ L + V+STGSL LD+AL
Sbjct: 1 MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEVEKDIQVVSTGSLGLDIAL 60
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR+VEIYG E+SGKTTL L V+ E QKLGG CA++D E+ALD + A +G++
Sbjct: 61 GVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVNYASKLGVNV 120
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+LLI+QPD+ E L + D L +SGSID+I++DSVAAL+PK EI + Q+R+M
Sbjct: 121 GDLLISQPDTGEQALEITDALVRSGSIDLIIIDSVAALVPKAEIEGEMGDSLPGLQARLM 180
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+QALRK+ ++ +++ L+IF+NQ+++
Sbjct: 181 SQALRKLTGTIKRTNCLVIFINQIRM 206
>gi|34557830|ref|NP_907645.1| recombinase A [Wolinella succinogenes DSM 1740]
gi|60393634|sp|Q7M8Q1.1|RECA_WOLSU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|34483548|emb|CAE10545.1| RECA PROTEIN [Wolinella succinogenes]
Length = 350
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 144/198 (72%), Gaps = 11/198 (5%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV-----ISTGSLKLDLALGIGGLPKG 120
K A+ LA+ Q+ FGK +++ L G + PV ISTGSL LD+ALGIGG+P+G
Sbjct: 7 KRKAIDLAIKQIDKAFGKGALVRL----GEK--PVEKIDSISTGSLGLDIALGIGGIPQG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EIYG E+SGKTTLAL VI E QK GG CA++D E+ALD S A+ +G+DAENLL++QP
Sbjct: 61 RIIEIYGPESSGKTTLALQVIAECQKKGGICAFIDAEHALDVSYAKRLGVDAENLLVSQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D E L +++TLT+SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRK+
Sbjct: 121 DYGEQALEILETLTRSGAVDLIVVDSVAALTPKSEIDGDMGDQHVGLQARLMSQALRKVT 180
Query: 241 YSLCQSHTLIIFLNQVKV 258
L + +T +IF+NQ+++
Sbjct: 181 GVLHKMNTTVIFINQIRM 198
>gi|117928699|ref|YP_873250.1| recA protein [Acidothermus cellulolyticus 11B]
gi|166199593|sp|A0LV04.1|RECA_ACIC1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|117649162|gb|ABK53264.1| recA protein [Acidothermus cellulolyticus 11B]
Length = 345
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 139/199 (69%), Gaps = 5/199 (2%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLP 118
A ++ AL A++Q+ GK S++ R R P VI TGS+ LD+ALGIGGLP
Sbjct: 2 AAAFDREKALEHAIAQIERAHGKGSLM---RLGDEARAPIDVIPTGSIALDVALGIGGLP 58
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVEIYG E+SGKTTLALH + AQ+ GG A++D E+ALDP A+ +G+D +NLL++
Sbjct: 59 RGRIVEIYGPESSGKTTLALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDNLLVS 118
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+V+DSVAAL+P+ EI + + Q+R+M+QALRK
Sbjct: 119 QPDTGEQALEIADTLIRSGAIDVVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRK 178
Query: 239 IHYSLCQSHTLIIFLNQVK 257
I +L S T IF+NQ++
Sbjct: 179 ITGALSHSGTTAIFINQLR 197
>gi|222064100|emb|CAR78905.1| recombinase A [Pseudochrobactrum sp. KSS 7.8]
Length = 247
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTT+ALH I EAQK GG CA++D E+AL
Sbjct: 3 VPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTMALHTIAEAQKKGGICAFVDAEHAL 62
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 63 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 122
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 123 GDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 160
>gi|334142450|ref|YP_004535658.1| recombination protein RecA [Novosphingobium sp. PP1Y]
gi|359401185|ref|ZP_09194156.1| recombination protein RecA [Novosphingobium pentaromativorans
US6-1]
gi|333940482|emb|CCA93840.1| recombination protein RecA [Novosphingobium sp. PP1Y]
gi|357597434|gb|EHJ59181.1| recombination protein RecA [Novosphingobium pentaromativorans
US6-1]
Length = 358
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 143/202 (70%), Gaps = 7/202 (3%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGG 116
D M + AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALG+GG
Sbjct: 13 DKDSMDRQKALDAALAQIDRAFGKGSAMKL----GSKETMQVEAISTGSLGLDIALGVGG 68
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGR++E+YG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G+D + L+
Sbjct: 69 LPKGRVIEVYGPESSGKTTLALHVIAEAQKAGGTAAFIDAEHALDPVYAKKLGVDIDELI 128
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
++QPD+ E L + DTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+L
Sbjct: 129 VSQPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSL 188
Query: 237 RKIHYSLCQSHTLIIFLNQVKV 258
RK+ S+ +S ++IF+NQ+++
Sbjct: 189 RKLTGSINRSKCMVIFINQLRM 210
>gi|315453305|ref|YP_004073575.1| recombinase A [Helicobacter felis ATCC 49179]
gi|315132357|emb|CBY82985.1| recA protein [Helicobacter felis ATCC 49179]
Length = 337
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 141/196 (71%), Gaps = 5/196 (2%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRI 122
QK AL LA+ Q+ FGK +++ R+ P+ STGSL LD+ALGIGG+P+GRI
Sbjct: 4 QKQKALDLAIRQIDKTFGKGALM---RWGDKEIEPIEATSTGSLGLDMALGIGGVPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL LHVI +AQK GG CA++D E+ALD A+ +G+D +NLLI+QPD+
Sbjct: 61 IEIYGPESSGKTTLTLHVIAQAQKEGGVCAFIDAEHALDVEYAKKLGVDVDNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +++TL +SG++DVI VDSVAAL P+ EI + + Q+R+M+QALRKI
Sbjct: 121 GEEALEILETLARSGAVDVIAVDSVAALTPRAEIEGDMGDQHVGLQARLMSQALRKITGV 180
Query: 243 LCQSHTLIIFLNQVKV 258
L + +T +IF+NQ+++
Sbjct: 181 LHKMNTTLIFINQIRM 196
>gi|206890314|ref|YP_002248376.1| RecA protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742252|gb|ACI21309.1| RecA protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 342
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 140/196 (71%), Gaps = 2/196 (1%)
Query: 64 MQKDN--ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
M KD AL +A+SQ+ +FGK +++ L + VI TGS+ LD+A GIGG P+GR
Sbjct: 1 MNKDKLKALEIAISQIEKNFGKGAIMRLGTKAHAEGIGVIPTGSISLDIATGIGGYPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EI+G E+SGKTTLALH I EAQ+ GG A++D E+ALD + A +G+D ENLLI+QPD
Sbjct: 61 VIEIFGPESSGKTTLALHAIAEAQRHGGVAAFIDAEHALDVNYASKLGVDVENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L V +TL +SG++D+IV+DSVAAL+PK EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEVTETLVRSGAVDIIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVK 257
++ +S T +IF+NQ++
Sbjct: 181 AISKSQTAVIFINQIR 196
>gi|154509073|ref|ZP_02044715.1| hypothetical protein ACTODO_01590 [Actinomyces odontolyticus ATCC
17982]
gi|153798707|gb|EDN81127.1| RecA protein [Actinomyces odontolyticus ATCC 17982]
Length = 363
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 16 RNKALEVALSQIDKQFGKGSVM---RLGDDNRPPVQVIPTGSLALDVALGIGGLPRGRVI 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A A+G+D ++LL++QPD+
Sbjct: 73 EVYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYARALGVDTDSLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 193 SATGTTAIFINQLR 206
>gi|395493566|ref|ZP_10425145.1| recombinase A [Sphingomonas sp. PAMC 26617]
gi|404253892|ref|ZP_10957860.1| recombinase A [Sphingomonas sp. PAMC 26621]
Length = 359
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 145/197 (73%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
++ AL AL+Q+ FGK S + L GS++ VISTGSL LD+ALG+GGLP+GR
Sbjct: 15 ERAKALEAALAQIDRAFGKGSAMKL----GSKQTMQVEVISTGSLGLDIALGVGGLPRGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G++ + L+++QPD
Sbjct: 71 VIEIYGPESSGKTTLALHVIAEAQKGGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+
Sbjct: 131 TGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTG 190
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 191 SISRSRCMVIFINQLRM 207
>gi|353732288|gb|AER13723.1| recombinase A, partial [Ensifer sp. AB3]
Length = 189
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 131/189 (69%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL SQ+ FGK ++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEGGFSQIERSFGKGLIMKLGAKDSVIEIETVSTGSLGLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 180
Query: 246 SHTLIIFLN 254
S+ ++IF+N
Sbjct: 181 SNCMVIFIN 189
>gi|220928127|ref|YP_002505036.1| recA protein [Clostridium cellulolyticum H10]
gi|219998455|gb|ACL75056.1| recA protein [Clostridium cellulolyticum H10]
Length = 347
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 140/195 (71%), Gaps = 1/195 (0%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +AL Q+ FGK +++ L +I TGS+ LDLALG+GG+P+GRI
Sbjct: 1 MLEKRKALEMALGQIEKQFGKGAVMKLGEN-SHMNVEIIPTGSMSLDLALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTT+ALH+I EAQK GG A++D E+ALDP A+ +G+D ENL+++QPD+
Sbjct: 60 VEIFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEITEALVRSGAIDVIVVDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVK 257
+ +S T IF+NQ++
Sbjct: 180 ISKSRTTAIFINQLR 194
>gi|374281854|gb|AEZ04930.1| recombinase A, partial [Rhizobium phaseoli]
Length = 184
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 132/184 (71%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
L ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGRI+EIYG E
Sbjct: 1 LEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGRIIEIYGPE 60
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L +
Sbjct: 61 SSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEI 120
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T+
Sbjct: 121 TDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNTM 180
Query: 250 IIFL 253
+IF+
Sbjct: 181 VIFI 184
>gi|431794107|ref|YP_007221012.1| protein RecA [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784333|gb|AGA69616.1| protein RecA [Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 347
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 140/192 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG L +D+ALG+GG+P+GR++EI
Sbjct: 7 KLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRVIEI 66
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+ EAQKLGG A++D E+ALDP A+A+G++ +NLLI+QPD+ E
Sbjct: 67 YGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLISQPDTGEQ 126
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDVI++DSVAAL+P+ EI + + +R+M+QALRK+ ++ +
Sbjct: 127 ALEICEALVRSGAIDVIIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISK 186
Query: 246 SHTLIIFLNQVK 257
S+T +IF+NQ++
Sbjct: 187 SNTCVIFINQIR 198
>gi|126735783|ref|ZP_01751528.1| recA protein [Roseobacter sp. CCS2]
gi|126714970|gb|EBA11836.1| recA protein [Roseobacter sp. CCS2]
Length = 360
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 142/202 (70%), Gaps = 6/202 (2%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIGG 116
D K K+ AL AL+Q+ FGK S++ L G + P I STGSL LD+ALGIGG
Sbjct: 11 DKKTADKEKALESALAQIERQFGKGSIMKLG---GENKMPEIEATSTGSLGLDIALGIGG 67
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGR++EIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G++ + LL
Sbjct: 68 LPKGRVIEIYGPESSGKTTLTLHAIAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELL 127
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
I+QPD+ E L +VDTL +SG++++++VDSVAAL PK E+ + +R+M+QA+
Sbjct: 128 ISQPDTGEQALEIVDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVHARLMSQAM 187
Query: 237 RKIHYSLCQSHTLIIFLNQVKV 258
RK+ S+ +S ++IF+NQ+++
Sbjct: 188 RKLTGSINRSGCMVIFINQIRM 209
>gi|383807189|ref|ZP_09962750.1| recombinase A [Candidatus Aquiluna sp. IMCC13023]
gi|383299619|gb|EIC92233.1| recombinase A [Candidatus Aquiluna sp. IMCC13023]
Length = 362
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL AL+Q+ FGK S++ R R P+ ISTGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 REKALDTALAQIDRQFGKGSVM---RLGSEERAPIASISTGSIALDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG EASGKTT+ALH I AQK GG A++D E+ALDP A +G+D + LL++QPD+
Sbjct: 64 EVYGPEASGKTTIALHAIASAQKAGGTAAFIDAEHALDPIYAAKLGVDIDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSIDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 124 EQALEITDMLIRSGSIDVIVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLTGAI 183
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 184 SNTDTTAIFINQLR 197
>gi|406945512|gb|EKD76979.1| hypothetical protein ACD_42C00513G0003 [uncultured bacterium]
Length = 349
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FG+ +++SL + VISTGSL LD+ALGIGGLP+GR+VEI
Sbjct: 5 KSKALSAALSQIEKQFGRGAIMSLGDGQAEKDISVISTGSLGLDVALGIGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L I E QK GG A++D E+ALDP AE +G+D + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLQTIAECQKAGGTAAFVDAEHALDPIYAEKLGVDIKKLLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++V+DSVAAL P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDMVVIDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRKLTANIKK 184
Query: 246 SHTLIIFLNQVKV 258
S+TL++F+NQ+++
Sbjct: 185 SNTLVVFINQIRM 197
>gi|281210244|gb|EFA84411.1| recombinase A [Polysphondylium pallidum PN500]
Length = 453
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 142/189 (75%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
L ++++ FGK +++ L F +++ VIS+GSL LD+ALGIGGLPKGRI+EI+G E
Sbjct: 95 LESTMAEIEKTFGKGTLMKLGTSFATQKVDVISSGSLGLDVALGIGGLPKGRIIEIFGPE 154
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
+SGKTTLALHVI +AQK GG C ++D E+AL+PS A+ +G++ + L I+QPDS E L +
Sbjct: 155 SSGKTTLALHVIAQAQKAGGNCTFIDAEHALNPSWAQKLGVNLDELFISQPDSGEQALEI 214
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
VD+L +S ++ VIVVDSVAAL+P+ E+ + + Q+R+M+QALRK+ +L +S+ +
Sbjct: 215 VDSLLRSKTMQVIVVDSVAALVPRVELEGEMGDSHVGVQARLMSQALRKLSPNLKESNCI 274
Query: 250 IIFLNQVKV 258
+IF+NQ+++
Sbjct: 275 LIFINQIRM 283
>gi|419850084|ref|ZP_14373100.1| RecA protein [Bifidobacterium longum subsp. longum 35B]
gi|419853863|ref|ZP_14376663.1| RecA protein [Bifidobacterium longum subsp. longum 2-2B]
gi|386406437|gb|EIJ21444.1| RecA protein [Bifidobacterium longum subsp. longum 2-2B]
gi|386410139|gb|EIJ24941.1| RecA protein [Bifidobacterium longum subsp. longum 35B]
Length = 418
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 145/210 (69%), Gaps = 4/210 (1%)
Query: 48 AEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLK 107
A+ P +D+ D K + AL AL+Q+ FGK S + L + VI TGSL
Sbjct: 29 AKDPAAEDKHELDPK---RKAALDTALAQVEKSFGKGSAMRLGDQP-EQNVEVIPTGSLA 84
Query: 108 LDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEA 167
LD+ALGIGGLPKGRIVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A
Sbjct: 85 LDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARK 144
Query: 168 MGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDA 227
+G+D ++L+++QPD+ E L + D L +SG++D+IV+DSVAAL+PK EI + +
Sbjct: 145 LGVDTDSLIVSQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGL 204
Query: 228 QSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
Q+R+M+QALRK+ +L Q+ T IF+NQ++
Sbjct: 205 QARLMSQALRKMTGALAQAGTTAIFINQLR 234
>gi|393770644|ref|ZP_10359123.1| recombination protein RecA [Novosphingobium sp. Rr 2-17]
gi|392723991|gb|EIZ81377.1| recombination protein RecA [Novosphingobium sp. Rr 2-17]
Length = 356
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 143/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALG+GGLP+G
Sbjct: 17 MDRQKALEAALAQIDKAFGKGSAMKL----GSKETMQVESISTGSLGLDIALGVGGLPRG 72
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTTLALHVI EAQK GG A++D E+ALDP A+ +G++ + L+++QP
Sbjct: 73 RVIEIYGPESSGKTTLALHVIAEAQKTGGTAAFIDAEHALDPVYAKKLGVNIDELIVSQP 132
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+
Sbjct: 133 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLT 192
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 193 GSISRSRCMVIFINQLRM 210
>gi|421504009|ref|ZP_15950953.1| recombinase A [Pseudomonas mendocina DLHK]
gi|400345110|gb|EJO93476.1| recombinase A [Pseudomonas mendocina DLHK]
Length = 347
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|405980451|ref|ZP_11038790.1| protein recA [Actinomyces turicensis ACS-279-V-Col4]
gi|404390444|gb|EJZ85513.1| protein recA [Actinomyces turicensis ACS-279-V-Col4]
Length = 364
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL +ALSQ+ FGK S++ R R PV I TGSL LD+ALGIGGLP+GR++
Sbjct: 17 RNKALEVALSQIDKQFGKGSVM---RLGDDSRPPVQVIPTGSLALDVALGIGGLPRGRVI 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D + LL++QPD+
Sbjct: 74 EIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDALLVSQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 134 EQALEIADMLIRSGGIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 193
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 194 SATGTTAIFINQLR 207
>gi|381210057|ref|ZP_09917128.1| recombinase A [Lentibacillus sp. Grbi]
Length = 349
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +AL Q+ FGK S++ L G + I +GSL LD+ALGIGG P+GR+VEI
Sbjct: 4 KKQALDMALKQIEKQFGKGSIMKLGEQEGQKV-ATIPSGSLALDVALGIGGYPRGRVVEI 62
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH I EAQ+ GG A++D E+ALDP+ A A+G+D E LL++QPD+ E
Sbjct: 63 YGPESSGKTTVALHAIAEAQQQGGQAAFIDAEHALDPTYARALGVDIEELLLSQPDTGEQ 122
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 123 ALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLSGAINK 182
Query: 246 SHTLIIFLNQVK 257
S T +F+NQ++
Sbjct: 183 SKTTAVFINQIR 194
>gi|348171421|ref|ZP_08878315.1| DNA recombination/repair [Saccharopolyspora spinosa NRRL 18395]
Length = 346
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
K AL LAL+Q+ +GK S++ R R P VI TGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 KGKALELALAQIDKQYGKGSVM---RLGDESRAPIEVIPTGSISLDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKT++ALH + AQKLGG A++D E+ALDP A+A+G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTSVALHAVANAQKLGGTAAFIDAEHALDPEYAKAIGVDTDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++DVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +L
Sbjct: 124 EQALEIADMLIRSGALDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTSAL 183
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 184 YNAKTTAIFINQLR 197
>gi|259419113|ref|ZP_05743030.1| protein RecA [Silicibacter sp. TrichCH4B]
gi|259345335|gb|EEW57189.1| protein RecA [Silicibacter sp. TrichCH4B]
Length = 357
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 138/201 (68%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
DD K K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGL
Sbjct: 8 KDDKKSGDKQKALDSALAQIERQFGKGSIMKLGDGTALQEIEASSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P GRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G+D + LLI
Sbjct: 68 PMGRIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+R
Sbjct: 128 SQPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S ++IF+NQ+++
Sbjct: 188 KLTGSISRSKCMVIFINQIRM 208
>gi|315122763|ref|YP_004063252.1| recombinase A [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496165|gb|ADR52764.1| recombinase A [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 348
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRI 122
M K AL ALSQ+ +GK S++ L G V+S+GSL LD+ALGIGG PKGRI
Sbjct: 1 MDKSKALDAALSQIERLYGKGSIMQLGSQSSISEGVEVVSSGSLGLDIALGIGGFPKGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTLALH I ++QK GG CA++D E+ALD A +G+D +NLLI+QPD+
Sbjct: 61 VEIYGPESSGKTTLALHAIAQSQKAGGTCAFVDAEHALDSVYARKLGVDLKNLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D+IVVDSVAAL P+ EI + Q+R+M+QALRK+ S
Sbjct: 121 GEQALEITDMLVRSGAVDIIVVDSVAALTPRAEIEGDMGESLPGLQARLMSQALRKLTGS 180
Query: 243 LCQSHTLIIFLNQVKV 258
+ +S+ ++IF+NQ+++
Sbjct: 181 ISRSNCILIFINQIRM 196
>gi|99081071|ref|YP_613225.1| recombinase A [Ruegeria sp. TM1040]
gi|99037351|gb|ABF63963.1| recA protein [Ruegeria sp. TM1040]
Length = 357
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 138/201 (68%)
Query: 58 HDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGL 117
DD K K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGL
Sbjct: 8 KDDKKSGDKQKALDSALAQIERQFGKGSIMKLGDGTALQEIEASSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P GRIVEIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G+D + LLI
Sbjct: 68 PMGRIVEIYGPESSGKTTLTLHCIAEQQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+R
Sbjct: 128 SQPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S ++IF+NQ+++
Sbjct: 188 KLTGSISRSKCMVIFINQIRM 208
>gi|297622180|ref|YP_003710317.1| bacterial DNA recombination protein recA [Waddlia chondrophila WSU
86-1044]
gi|297377481|gb|ADI39311.1| bacterial DNA recombination protein recA [Waddlia chondrophila WSU
86-1044]
gi|337292521|emb|CCB90538.1| protein recA [Waddlia chondrophila 2032/99]
Length = 350
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 140/193 (72%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL LA+S + FG+ +++SL + VI TG+L LD+ALGIGG+P+GRIVE
Sbjct: 8 ERKKALDLAVSHIKKQFGEGAIMSLGSRASQQEIGVIKTGTLALDVALGIGGVPRGRIVE 67
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGK+TLALH++ AQK GG AY+D E+ALDPS A +G++ E LLI+QPD E
Sbjct: 68 IYGPESSGKSTLALHIVANAQKSGGLAAYIDAEHALDPSYATKIGVNIEELLISQPDCGE 127
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L++ +TL +S ++DVI++DSVAAL+PK E+ I + Q+R+M+QALRK+ +L
Sbjct: 128 EALNIAETLARSNAVDVIIIDSVAALVPKSELEGEIGDSFVGLQARMMSQALRKLTATLA 187
Query: 245 QSHTLIIFLNQVK 257
+S+T +F+NQ++
Sbjct: 188 RSNTCAVFINQIR 200
>gi|183601363|ref|ZP_02962733.1| recombinase A [Bifidobacterium animalis subsp. lactis HN019]
gi|219683419|ref|YP_002469802.1| recombinase A [Bifidobacterium animalis subsp. lactis AD011]
gi|241191138|ref|YP_002968532.1| recombinase A [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196544|ref|YP_002970099.1| recombinase A [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|384191391|ref|YP_005577139.1| recombinase A [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192537|ref|YP_005578284.1| recombinase A [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|384194131|ref|YP_005579877.1| recombinase A, RecA protein [Bifidobacterium animalis subsp. lactis
BLC1]
gi|384195696|ref|YP_005581441.1| recombinase A [Bifidobacterium animalis subsp. lactis V9]
gi|387821003|ref|YP_006301046.1| recombinase A [Bifidobacterium animalis subsp. lactis B420]
gi|387822681|ref|YP_006302630.1| recombinase A [Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679664|ref|ZP_17654540.1| recombinase A [Bifidobacterium animalis subsp. lactis BS 01]
gi|183218969|gb|EDT89610.1| recombinase A [Bifidobacterium animalis subsp. lactis HN019]
gi|219621069|gb|ACL29226.1| protein RecA [Bifidobacterium animalis subsp. lactis AD011]
gi|240249530|gb|ACS46470.1| recombinase A [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251098|gb|ACS48037.1| recombinase A [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|289178883|gb|ADC86129.1| RecA [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794127|gb|ADG33662.1| recombinase A [Bifidobacterium animalis subsp. lactis V9]
gi|340365274|gb|AEK30565.1| RecA [Bifidobacterium animalis subsp. lactis CNCM I-2494]
gi|345282990|gb|AEN76844.1| recombinase A, RecA protein [Bifidobacterium animalis subsp. lactis
BLC1]
gi|366041308|gb|EHN17812.1| recombinase A [Bifidobacterium animalis subsp. lactis BS 01]
gi|386653704|gb|AFJ16834.1| RecA protein [Bifidobacterium animalis subsp. lactis B420]
gi|386655289|gb|AFJ18418.1| RecA protein [Bifidobacterium animalis subsp. lactis Bi-07]
Length = 382
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 149/222 (67%), Gaps = 11/222 (4%)
Query: 39 MNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG 98
M S SS E E + P D K +++AL AL+Q+ FGK S + L G R
Sbjct: 1 MAARSKSSVKET-EKTEAPGVDKK---REDALNSALAQVEKQFGKGSAMRL----GDRPE 52
Query: 99 ---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLD 155
VI TGSL LD ALGIGGLP+GRIVEIYG E+SGKTTLALHV+ AQK GG A++D
Sbjct: 53 QDIEVIPTGSLALDTALGIGGLPRGRIVEIYGPESSGKTTLALHVVANAQKNGGVAAFID 112
Query: 156 VENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCE 215
E+ALDP A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK E
Sbjct: 113 AEHALDPVYARHLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAE 172
Query: 216 IGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
I + + Q+R+M+QALRK+ +L Q++T IF+NQ++
Sbjct: 173 IEGDMGDSHVGLQARLMSQALRKMTGALAQANTTAIFINQLR 214
>gi|406965963|gb|EKD91547.1| hypothetical protein ACD_30C00002G0044 [uncultured bacterium]
Length = 366
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 138/198 (69%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D+ K NA+ A++Q+ +G S++ L VISTGS+ LDLALG+GGLPK
Sbjct: 11 DSSTDAKKNAIATAMAQIQKQYGSGSIMRLGERAERMATEVISTGSIALDLALGVGGLPK 70
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG EASGKTT+ LHVI EAQK GG A++D E+ALDP A+ +G++ ++LLI+Q
Sbjct: 71 GRIIEIYGPEASGKTTVCLHVIAEAQKKGGVAAFIDAEHALDPQRAQKIGVNLDDLLISQ 130
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + D L +SG IDV+V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 131 PDTGEQGLEIADALIRSGGIDVLVIDSVAALTPKAEIEGEMGDAVMGMQARLMSQALRKL 190
Query: 240 HYSLCQSHTLIIFLNQVK 257
++ ++T++IF NQ++
Sbjct: 191 TGAISNTNTIVIFTNQLR 208
>gi|374995987|ref|YP_004971486.1| protein RecA [Desulfosporosinus orientis DSM 765]
gi|357214353|gb|AET68971.1| protein RecA [Desulfosporosinus orientis DSM 765]
Length = 346
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 141/192 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +AL+Q+ FGK S++ L R VI TGSL LDLALG+GG+P+GRI+EI
Sbjct: 6 KLKALDIALAQIEKQFGKGSIMKLGDSTSDRFIEVIPTGSLALDLALGVGGVPRGRIIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+I EAQKLGG A++D E+ALDP A+A+G++ + LL+AQPD+ E
Sbjct: 66 YGPESSGKTTVALHIIAEAQKLGGAAAFIDAEHALDPIYAKALGVNIDELLVAQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +S ++DV+V+DSVAAL+P+ EI + + +R+M+QALRK+ S+ +
Sbjct: 126 GLEICEALVRSAAVDVVVLDSVAALVPRAEIEGEMGDNHVGLHARLMSQALRKLTGSISK 185
Query: 246 SHTLIIFLNQVK 257
S+T ++F+NQ++
Sbjct: 186 SNTCVVFINQIR 197
>gi|452990331|emb|CCQ98553.1| multifunctional SOS repair factor [Clostridium ultunense Esp]
Length = 359
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 142/196 (72%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K+ + AL ALSQ+ FGK S++ L + + V+++GS+ LD+ALG+GG P+GR
Sbjct: 8 KVSDRKAALEKALSQIEKQFGKGSIMRLGEASQANQVSVVTSGSIALDVALGVGGYPRGR 67
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTT+ALH I E Q++GG A++D E+ALDP+ AE +G++ + LLI+QPD
Sbjct: 68 IIEIYGPESSGKTTVALHAIAEVQRIGGTAAFIDAEHALDPTYAEKLGVNIDELLISQPD 127
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + + L +SG+ID++V+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 128 TGEQALEICEALVRSGAIDIVVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLSG 187
Query: 242 SLCQSHTLIIFLNQVK 257
++ +S T+ IF+NQ++
Sbjct: 188 AINKSKTIAIFINQLR 203
>gi|50955213|ref|YP_062501.1| recombinase A [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50951695|gb|AAT89396.1| recombination repairing protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 374
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 142/204 (69%), Gaps = 6/204 (2%)
Query: 56 EPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALG 113
EPH + ++ AL AL+Q+ FGK S++ R R PV + TGS+ LD+ALG
Sbjct: 15 EPHMPSP-ADREKALVTALAQIDRQFGKGSVM---RLGSDERAPVEVVPTGSIALDVALG 70
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
IGGLP+GRIVEIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A +G+D +
Sbjct: 71 IGGLPRGRIVEIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPDYARKLGVDID 130
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
LL++QPD+ E L + D L +SGSID+IV+DSVAAL+P+ EI + + Q+R+M+
Sbjct: 131 ALLVSQPDTGEQALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDAHVGLQARLMS 190
Query: 234 QALRKIHYSLCQSHTLIIFLNQVK 257
QALRK+ +L Q++T +IF+NQ++
Sbjct: 191 QALRKLTGALSQTNTTMIFINQLR 214
>gi|406916498|gb|EKD55510.1| hypothetical protein ACD_60C00004G0020 [uncultured bacterium]
Length = 347
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +R VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 5 KKKALGAALSQIERQFGKGSVMRLGDASSTRDIEVISTGSLALDIALGVGGLPRGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI Q+ GG A++D E+ALDP+ A+ +G++ + LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAACQRQGGTAAFVDAEHALDPAYAKRLGVNVDELLISQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSSAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL+IF+NQ+++
Sbjct: 185 SNTLVIFINQIRM 197
>gi|345099542|gb|AEN69101.1| recombinase A protein, partial [Rhizobium mesoamericanum]
Length = 189
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 133/189 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLI 250
S+ +S+T++
Sbjct: 181 SISKSNTMV 189
>gi|331029409|gb|AEC49854.1| recombinase A [Bradyrhizobium sp. SEMIA 696]
Length = 190
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 132/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGR+V
Sbjct: 6 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDIALGVGGLPKGRVV 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 66 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 126 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 185
Query: 244 CQSHT 248
+SHT
Sbjct: 186 NKSHT 190
>gi|386867274|ref|YP_006280268.1| recombinase A [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|385701357|gb|AFI63305.1| recombinase A [Bifidobacterium animalis subsp. animalis ATCC 25527]
Length = 382
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 149/222 (67%), Gaps = 11/222 (4%)
Query: 39 MNIHSLSSAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG 98
M S SS E E + P D K +++AL AL+Q+ FGK S + L G R
Sbjct: 1 MAARSKSSVKET-EKTEAPGVDKK---REDALNSALAQVEKQFGKGSAMRL----GDRPE 52
Query: 99 ---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLD 155
VI TGSL LD ALGIGGLP+GRIVEIYG E+SGKTTLALHV+ AQK GG A++D
Sbjct: 53 QDIEVIPTGSLALDTALGIGGLPRGRIVEIYGPESSGKTTLALHVVANAQKNGGVAAFID 112
Query: 156 VENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCE 215
E+ALDP A +G+D ++L+++QPD+ E L + D L +SG++DVIV+DSVAAL+PK E
Sbjct: 113 AEHALDPVYARHLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAE 172
Query: 216 IGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
I + + Q+R+M+QALRK+ +L Q++T IF+NQ++
Sbjct: 173 IEGDMGDSHVGLQARLMSQALRKMTGALAQANTTAIFINQLR 214
>gi|126726569|ref|ZP_01742410.1| recombinase A [Rhodobacterales bacterium HTCC2150]
gi|126704432|gb|EBA03524.1| recombinase A [Rhodobacteraceae bacterium HTCC2150]
Length = 358
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 140/190 (73%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L + ++ STGSL LD+ALGIGGLPKGR++EIYG
Sbjct: 19 ALDSALSQIERQFGKGSIMKLGQDGATQEISATSTGSLGLDIALGIGGLPKGRVIEIYGP 78
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTL LH I E QKLGG CA++D E+ALDP A+ +G++ + LLI+QPD+ E L
Sbjct: 79 ESSGKTTLTLHSIAEEQKLGGVCAFVDAEHALDPLYAKKLGVNLDELLISQPDTGEQALE 138
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ +TL +SG+++++VVDSVAAL PK E+ + AQ+R+M+QA+RK+ ++ +S+
Sbjct: 139 ITETLVRSGAVNMVVVDSVAALTPKAELEGDMGDRQVGAQARLMSQAMRKLTGAINKSNC 198
Query: 249 LIIFLNQVKV 258
++IF+NQ+++
Sbjct: 199 MVIFINQIRM 208
>gi|410478671|ref|YP_006766308.1| recombinase A [Leptospirillum ferriphilum ML-04]
gi|424869559|ref|ZP_18293256.1| RecA protein [Leptospirillum sp. Group II 'C75']
gi|124514183|gb|EAY55698.1| RecA protein [Leptospirillum rubarum]
gi|387220610|gb|EIJ75269.1| RecA protein [Leptospirillum sp. Group II 'C75']
gi|406773923|gb|AFS53348.1| RecA protein [Leptospirillum ferriphilum ML-04]
Length = 360
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ +L LA+SQ+ FGK S++ L + + PVI +GSL LD+ALGIGG P+GR+VE+
Sbjct: 9 RQKSLDLAVSQIEKQFGKGSIMRLGKDQVPQNVPVIPSGSLALDIALGIGGYPRGRVVEL 68
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I E K GG A++D E+ALD + A+ +G+ E+LLIAQPD+ E
Sbjct: 69 YGPESSGKTTLALHAISEVHKAGGVAAFIDAEHALDVTYAKRLGVRTEDLLIAQPDTGEQ 128
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SGSID+IVVDSVAAL+P+ E+ + + Q+R+M+QALRK+ ++ +
Sbjct: 129 ALEITETLVRSGSIDLIVVDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLTSAISK 188
Query: 246 SHTLIIFLNQVKV 258
S+T ++F+NQ+++
Sbjct: 189 SNTTVLFINQIRM 201
>gi|395652525|ref|ZP_10440375.1| recombinase A [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 348
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 143/195 (73%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL ALSQ+ FGK +++ R R P+ +STGSL LD+ALGIGG+P+GRI+
Sbjct: 5 KKKALDAALSQIEKQFGKGAVM---RMGEEPREPIPAVSTGSLGLDIALGIGGVPEGRII 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGK+TL L ++ +AQKLG CA++D E+ALDP AE +G+D ++LL++QPD+
Sbjct: 62 EIYGPESSGKSTLCLQIVAQAQKLGKACAFIDAEHALDPLYAEKLGVDLDSLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSI VI++DSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEITDMLVRSGSIGVIIIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTASV 181
Query: 244 CQSHTLIIFLNQVKV 258
Q++T+++F+NQ+++
Sbjct: 182 KQTNTILVFINQIRM 196
>gi|146308037|ref|YP_001188502.1| recombinase A [Pseudomonas mendocina ymp]
gi|145576238|gb|ABP85770.1| RecA protein [Pseudomonas mendocina ymp]
Length = 347
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S +IDVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAIDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|384196826|ref|YP_005582570.1| recombinase A [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333110211|gb|AEF27227.1| RecA protein [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 394
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 139/196 (70%), Gaps = 7/196 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGR 121
++ AL AL+Q+ FGK S + L G + VI TGSL LD+ALGIGGLPKGR
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRL----GDQPVQNVEVIPTGSLALDMALGIGGLPKGR 77
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD
Sbjct: 78 IVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPD 137
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 138 NGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTG 197
Query: 242 SLCQSHTLIIFLNQVK 257
+L Q+ T IF+NQ++
Sbjct: 198 ALAQAGTTAIFINQLR 213
>gi|195928282|gb|ACG55797.1| recombination protein A, partial [Bradyrhizobium denitrificans]
Length = 181
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 132/179 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGR++EIYG E+SG
Sbjct: 3 ALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRVIEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALEICDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLII 251
L +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +SHT++I
Sbjct: 123 LVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINKSHTMVI 181
>gi|325651215|emb|CBY89429.1| RecA protein [Rhizobium alamii]
Length = 183
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNESIVEIETVSTGSLSLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|306819658|ref|ZP_07453321.1| recombination protein A [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552303|gb|EFM40231.1| recombination protein A [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 373
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
+++ K AL ALS + +FGK S++ L I TGS+ LD A+GIGG+PKGR
Sbjct: 12 EVVDKKKALDKALSDIQKEFGKGSIMLLGENT-KMNVEAIPTGSVGLDKAIGIGGVPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTT+ALH I EAQKLGG A++D E+ALDP A A+G+D ++LLI+QPD
Sbjct: 71 IVEIYGAESSGKTTIALHCIAEAQKLGGTAAFIDAEHALDPIYARALGVDIDSLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 131 TGEQALDITDTLVRSGALDIIVVDSVAALVPKTEIEGEMGDTFIGLQARLMSQALRKLTG 190
Query: 242 SLCQSHTLIIFLNQVK 257
+ S T++IF+NQ++
Sbjct: 191 HINWSKTVVIFINQLR 206
>gi|255546127|ref|XP_002514123.1| DNA repair protein reca, putative [Ricinus communis]
gi|223546579|gb|EEF48077.1| DNA repair protein reca, putative [Ricinus communis]
Length = 380
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 146/191 (76%)
Query: 70 LRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGRE 129
++L + + + +GK +++ R + PV+STGS LD+ALG GGLPKGR+VEIYG E
Sbjct: 22 IKLQVHXITSAYGKGAIMWFGRSIAPKDVPVVSTGSFALDVALGTGGLPKGRVVEIYGPE 81
Query: 130 ASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSV 189
ASGKTTLALHVI EAQK GGYC ++D E+ALD SLA+++G++ ENLL++QPD E LS+
Sbjct: 82 ASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSSLAQSIGVNTENLLLSQPDCGEQALSL 141
Query: 190 VDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTL 249
VDTL +SGS+DV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+ +SL QS T+
Sbjct: 142 VDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSQSETV 201
Query: 250 IIFLNQVKVLL 260
+IF+NQV+ L
Sbjct: 202 LIFINQVRAKL 212
>gi|171742631|ref|ZP_02918438.1| hypothetical protein BIFDEN_01744 [Bifidobacterium dentium ATCC
27678]
gi|171278245|gb|EDT45906.1| RecA protein [Bifidobacterium dentium ATCC 27678]
Length = 451
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 140/198 (70%), Gaps = 11/198 (5%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP-----VISTGSLKLDLALGIGGLPK 119
++ AL AL+Q+ +FGK S + L G R P VI TGSL LD+ALGIGGLPK
Sbjct: 88 RRQAALETALAQVEKNFGKGSAMRL----GDR--PEQDVEVIPTGSLALDMALGIGGLPK 141
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVEIYG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++Q
Sbjct: 142 GRIVEIYGPESSGKTTLALHVVANAQKKGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQ 201
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 202 PDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKM 261
Query: 240 HYSLCQSHTLIIFLNQVK 257
+L Q+ T IF+NQ++
Sbjct: 262 TGALAQAGTTAIFINQLR 279
>gi|171464132|ref|YP_001798245.1| recA protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171193670|gb|ACB44631.1| recA protein [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 362
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L S V+S+GSL LD+ALG+GGL +GR++EI
Sbjct: 21 KQKALTAALAQIEKQFGKGSIMRLGDAEISEDIQVVSSGSLGLDIALGVGGLARGRVIEI 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QKLGG CA++D E+ALD A +G+D NLLI+QPD+ E
Sbjct: 81 YGPESSGKTTLTLHAIAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVNNLLISQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SGSID+IV+DSVAAL+PK EI + Q+R+M+QALRK+ ++ +
Sbjct: 141 ALEIADALVRSGSIDLIVIDSVAALVPKAEIEGDMGDSLPGLQARLMSQALRKLTGAIKR 200
Query: 246 SHTLIIFLNQVKV 258
++T +IF+NQ+++
Sbjct: 201 TNTTVIFINQIRM 213
>gi|402309792|ref|ZP_10828765.1| RecA protein [Eubacterium sp. AS15]
gi|400370418|gb|EJP23403.1| RecA protein [Eubacterium sp. AS15]
Length = 374
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
+++ K AL ALS + +FGK S++ L I TGS+ LD A+GIGG+PKGR
Sbjct: 12 EVVDKKKALDKALSDIQKEFGKGSIMLLGENT-KMNVEAIPTGSVGLDKAIGIGGVPKGR 70
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTT+ALH I EAQKLGG A++D E+ALDP A A+G+D ++LLI+QPD
Sbjct: 71 IVEIYGAESSGKTTIALHCIAEAQKLGGTAAFIDAEHALDPIYARALGVDIDSLLISQPD 130
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 131 TGEQALDITDTLVRSGALDIIVVDSVAALVPKTEIEGEMGDTFIGLQARLMSQALRKLTG 190
Query: 242 SLCQSHTLIIFLNQVK 257
+ S T++IF+NQ++
Sbjct: 191 HINWSKTVVIFINQLR 206
>gi|424742868|ref|ZP_18171188.1| RecA protein [Acinetobacter baumannii WC-141]
gi|422943831|gb|EKU38842.1| RecA protein [Acinetobacter baumannii WC-141]
Length = 348
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|409426349|ref|ZP_11260904.1| recombinase A [Pseudomonas sp. HYS]
Length = 355
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|374281844|gb|AEZ04925.1| recombinase A, partial [Rhizobium sp. HBR3]
Length = 185
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 132/185 (71%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EIYG
Sbjct: 1 ALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIIEIYGP 60
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L
Sbjct: 61 ESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALE 120
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 121 ITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISKSNC 180
Query: 249 LIIFL 253
++IF+
Sbjct: 181 MVIFI 185
>gi|226973221|gb|ACO95151.1| recombinase A [Bradyrhizobium sp. RST89]
Length = 185
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 134/185 (72%)
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGR+VEIYG
Sbjct: 1 QALSAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRVVEIYG 60
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L
Sbjct: 61 PESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQAL 120
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+
Sbjct: 121 EICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINKSN 180
Query: 248 TLIIF 252
T++IF
Sbjct: 181 TMVIF 185
>gi|68349491|gb|AAY96637.1| RecA [Mesorhizobium sp. ICMP 15054]
Length = 190
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 134/190 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 1 KSVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSHTLII 251
S+ +S+T++I
Sbjct: 181 SISRSNTMVI 190
>gi|339479391|gb|ABE95859.1| RecA protein [Bifidobacterium breve UCC2003]
Length = 392
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 139/196 (70%), Gaps = 7/196 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGR 121
++ AL AL+Q+ FGK S + L G + VI TGSL LD+ALGIGGLPKGR
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRL----GDQPVQNVEVIPTGSLALDMALGIGGLPKGR 77
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD
Sbjct: 78 IVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPD 137
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 138 NGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTG 197
Query: 242 SLCQSHTLIIFLNQVK 257
+L Q+ T IF+NQ++
Sbjct: 198 ALAQAGTTAIFINQLR 213
>gi|146740937|emb|CAJ44529.1| recombinase A [Bradyrhizobium sp. CH2493]
gi|146741037|emb|CAJ44618.1| recombinase A [Bradyrhizobium elkanii USDA 76]
Length = 186
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 132/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGR+V
Sbjct: 2 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDIALGVGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+SHT
Sbjct: 182 NKSHT 186
>gi|340360394|ref|ZP_08682864.1| recombination protein A [Actinomyces sp. oral taxon 448 str. F0400]
gi|339883595|gb|EGQ73438.1| recombination protein A [Actinomyces sp. oral taxon 448 str. F0400]
Length = 400
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 137/198 (69%), Gaps = 5/198 (2%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPK 119
+ + AL ALSQ+ FGK S++ R R PV I TGS LD+ALGIGGLP+
Sbjct: 6 QTQDRSKALATALSQIDKSFGKGSVM---RLGDDTRPPVAVIPTGSTALDVALGIGGLPR 62
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+VEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D +NLL++Q
Sbjct: 63 GRVVEIYGPESSGKTTVALHAVASAQKAGGNAAFIDAEHALDPVYAKALGVDTDNLLVSQ 122
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + D L +SG +D+IVVDSVAAL+PK EI + + Q+R+M+QALRKI
Sbjct: 123 PDTGEQALEITDMLIRSGGLDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKI 182
Query: 240 HYSLCQSHTLIIFLNQVK 257
+L + T IF+NQ++
Sbjct: 183 TGALSATGTTAIFINQLR 200
>gi|132241|sp|P16238.1|RECA_THIFE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|154653|gb|AAA27385.1| recA protein [Acidithiobacillus ferrooxidans]
Length = 346
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 135/194 (69%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
Q+ L ALSQ+ FGK +++ L + V STGSL LDLALG+GGLP+GR+VE
Sbjct: 4 QRSKGLSAALSQIDKQFGKGAVMRLGDHNAIKDIEVYSTGSLGLDLALGVGGLPRGRVVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH I Q GG A++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 64 IYGPESSGKTTLTLHAIASCQAAGGTAAFIDAEHALDPGYAHKLGVDLENLLISQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALR + ++
Sbjct: 124 QALEIADMLVRSGAVDLIVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRNLTANIS 183
Query: 245 QSHTLIIFLNQVKV 258
+S+TL+IF+NQ+++
Sbjct: 184 RSNTLVIFINQIRM 197
>gi|206602303|gb|EDZ38784.1| RecA protein [Leptospirillum sp. Group II '5-way CG']
Length = 360
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ +L LALSQ+ FGK S++ L + + PVI +GSL LD+ALGIGG P+GR+VE+
Sbjct: 9 RQKSLDLALSQIEKQFGKGSIMRLGKDQVPQIVPVIPSGSLALDIALGIGGYPRGRVVEL 68
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I E K GG A++D E+ALD + A+ +G+ E+LLIAQPD+ E
Sbjct: 69 YGPESSGKTTLALHAISEVHKAGGVAAFIDAEHALDVTYAKRLGVRTEDLLIAQPDTGEQ 128
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SGSID+IVVDSVAAL+P+ E+ + + Q+R+M+QALRK+ ++ +
Sbjct: 129 ALEITETLVRSGSIDLIVVDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLTSAISK 188
Query: 246 SHTLIIFLNQVKV 258
S+T ++F+NQ+++
Sbjct: 189 SNTTVLFINQIRM 201
>gi|392951170|ref|ZP_10316725.1| RecA protein [Hydrocarboniphaga effusa AP103]
gi|391860132|gb|EIT70660.1| RecA protein [Hydrocarboniphaga effusa AP103]
Length = 338
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 139/196 (70%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
+ AL AL Q+ FGK +++ + G+ P VISTGS+ LD ALGIGG+P+GR+
Sbjct: 5 RRKALEAALGQIDKQFGKGTIMRM----GANERPEIEVISTGSITLDAALGIGGVPRGRV 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTT ALHV +AQK+GG CAY+D E+ALD + AE +G+ +LLI+QPD+
Sbjct: 61 VEIYGPESSGKTTFALHVTAQAQKIGGTCAYIDAEHALDVTYAERLGVQVGDLLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +S ++DVIV+DSVAAL+PK EI + Q+R+M+QALRK+ S
Sbjct: 121 GEQALEIADMLVRSNAVDVIVIDSVAALVPKSEIEGEMGDAAVGVQARLMSQALRKLTGS 180
Query: 243 LCQSHTLIIFLNQVKV 258
+ +S TLIIF+NQ+++
Sbjct: 181 INRSKTLIIFINQLRM 196
>gi|389690298|ref|ZP_10179315.1| protein RecA [Microvirga sp. WSM3557]
gi|388589816|gb|EIM30104.1| protein RecA [Microvirga sp. WSM3557]
Length = 347
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 143/197 (72%), Gaps = 5/197 (2%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGR 121
+ K+ A+ A++Q+ FGK +++ R G + V ISTGSL LD+ALG+GGLPKGR
Sbjct: 3 LDKNKAIETAVAQIERAFGKGAIM---RLGGDQVVEVETISTGSLGLDIALGVGGLPKGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTL LH I EAQK GG CA++D E+ALDP A +G++ ++L+++QPD
Sbjct: 60 IIEIYGPESSGKTTLTLHAIAEAQKKGGVCAFIDAEHALDPVYARKLGVNLDDLIVSQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
E L + DT+ +SG+IDV+++DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 120 HGEQALEIADTMVRSGAIDVVIIDSVAALTPKAEIEGEMGESRPGLQARLMSQALRKLTG 179
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +++TL+IF+NQ+++
Sbjct: 180 SIHRTNTLVIFINQIRM 196
>gi|345019814|ref|ZP_08783427.1| recombinase A [Ornithinibacillus scapharcae TW25]
Length = 346
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL +AL Q+ FGK S++ L G + S+GSL LD+ALGIGG PKGRI+EI
Sbjct: 4 RKQALDMALKQIEKQFGKGSIMKLGENAGQKI-ETTSSGSLALDIALGIGGYPKGRIIEI 62
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH I EAQK GG A++D E+ALDP+ A A+G++ + LL++QPD+ E
Sbjct: 63 YGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPTYARALGVNIDELLLSQPDTGEQ 122
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++DV+VVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 123 ALEIAEALVRSGAVDVLVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGAINK 182
Query: 246 SHTLIIFLNQVK 257
S T IF+NQV+
Sbjct: 183 SKTTAIFINQVR 194
>gi|192362324|ref|YP_001982693.1| recombinase A [Cellvibrio japonicus Ueda107]
gi|190688489|gb|ACE86167.1| recA protein [Cellvibrio japonicus Ueda107]
Length = 353
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 140/196 (71%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL+ AL Q+ FGK +++ + G R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 10 KEKALQAALGQIERQFGKGTVMRM----GDREQMVIPAISTGSLGLDVALGIGGLPKGRI 65
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL L VI EAQ+ GG CA++D E+ALDP A +G++ +L+++QPD+
Sbjct: 66 IEIYGPESSGKTTLTLQVIAEAQRQGGTCAFIDAEHALDPIYATKLGVNVGDLIVSQPDT 125
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L V D L +SG+IDV+VVDSVAAL P+ EI + + Q+R+M+QALRKI +
Sbjct: 126 GEQALEVTDMLVRSGAIDVLVVDSVAALTPRAEIEGEMGDHHVGLQARLMSQALRKITGN 185
Query: 243 LCQSHTLIIFLNQVKV 258
+ ++ L+IF+NQ+++
Sbjct: 186 IKNANCLVIFINQIRM 201
>gi|410656957|ref|YP_006909328.1| RecA protein [Dehalobacter sp. DCA]
gi|410659997|ref|YP_006912368.1| RecA protein [Dehalobacter sp. CF]
gi|409019312|gb|AFV01343.1| RecA protein [Dehalobacter sp. DCA]
gi|409022353|gb|AFV04383.1| RecA protein [Dehalobacter sp. CF]
Length = 346
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 138/192 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK +++ L ISTGSL LDLALG+GG+P+GR++E+
Sbjct: 6 KLKALDIALSQIEKQFGKGAIMKLGEASDRMAVETISTGSLALDLALGVGGVPRGRVIEV 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ LH+I EAQK GG A++D E+ALDP A A+G++ ++LL++QPD+ E
Sbjct: 66 YGPESSGKTTVTLHIIAEAQKTGGVAAFIDAEHALDPVYARALGVNVDDLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG++DV+V+DSVAAL+P+ EI + + +R+M+QALRK+ + +
Sbjct: 126 ALEICEALVRSGAVDVVVIDSVAALVPRAEIEGEMGDSHMGLHARLMSQALRKLTGCISK 185
Query: 246 SHTLIIFLNQVK 257
SHT +IF+NQ++
Sbjct: 186 SHTCVIFINQIR 197
>gi|338930795|emb|CBX55465.1| recombinase A [Bradyrhizobium japonicum]
Length = 186
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ SL
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASL 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|148887239|emb|CAM12786.1| recombinase A [Ochrobactrum sp. PR 17]
Length = 268
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 7 VSTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 66
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI +
Sbjct: 67 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEM 126
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 127 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM 164
>gi|304321908|ref|YP_003855551.1| recombinase A [Parvularcula bermudensis HTCC2503]
gi|303300810|gb|ADM10409.1| recombinase A [Parvularcula bermudensis HTCC2503]
Length = 360
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 140/199 (70%), Gaps = 8/199 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPK 119
M K AL ALSQ+ FGK S++ L GS+ V ISTGSL LD+ALGIGGLPK
Sbjct: 12 MDKSKALEAALSQIDKAFGKGSVMKL----GSQDKIVQIEGISTGSLGLDIALGIGGLPK 67
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRIVEIYG E+SGKTTLALH E+QK GG A++D E+ALDP A +G+ + LLI+Q
Sbjct: 68 GRIVEIYGPESSGKTTLALHCAAESQKAGGTAAFIDAEHALDPIYASKLGVKLDELLISQ 127
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG+IDV+V+DSVAAL PK E+ + Q+R+M+QALRK+
Sbjct: 128 PDTGEQALEIADTLVRSGAIDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKL 187
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S+ L+IF+NQ+++
Sbjct: 188 TGSISRSNCLVIFINQIRM 206
>gi|333919370|ref|YP_004492951.1| protein recA [Amycolicicoccus subflavus DQS3-9A1]
gi|333481591|gb|AEF40151.1| Protein recA [Amycolicicoccus subflavus DQS3-9A1]
Length = 361
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 141/194 (72%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL LAL+Q+ +FGK S++ R R P+ I TGS+ LD+ALGIGGLP+GR++
Sbjct: 23 REKALELALAQIDKNFGKGSVM---RLGDEVRPPISTIPTGSVALDVALGIGGLPRGRVI 79
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQ+ GG A++D E+ALDP A+A+G+D + LL++QPD+
Sbjct: 80 EIYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKALGVDTDALLVSQPDTG 139
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D LT+SG++D+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +L
Sbjct: 140 EQALEIADMLTRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTSAL 199
Query: 244 CQSHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 200 SSSGTTAIFINQLR 213
>gi|301335042|emb|CBW30484.1| recombinase A [Ochrobactrum pecoris]
gi|301335044|emb|CBW30485.1| recombinase A [Ochrobactrum pecoris]
Length = 247
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 3 VSTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 62
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI +
Sbjct: 63 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEM 122
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 123 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM 160
>gi|331029417|gb|AEC49858.1| recombinase A [Bradyrhizobium sp. SEMIA 6154]
Length = 186
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 132/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGR+V
Sbjct: 2 MDKSKALXAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDIALGVGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+SHT
Sbjct: 182 NKSHT 186
>gi|115498193|gb|ABI98676.1| RecA [Bradyrhizobium sp. CCBAU 65199]
Length = 183
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 134/178 (75%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+VEIYG E+SGKTTLALH
Sbjct: 1 FGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVVEIYGPESSGKTTLALHT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DTL +SG++D
Sbjct: 61 VAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALEICDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINKSNTMVIFINQIRM 178
>gi|282890378|ref|ZP_06298906.1| hypothetical protein pah_c016o106 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174001|ref|YP_004650811.1| recombinase A [Parachlamydia acanthamoebae UV-7]
gi|281499760|gb|EFB42051.1| hypothetical protein pah_c016o106 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336478359|emb|CCB84957.1| protein recA [Parachlamydia acanthamoebae UV-7]
Length = 357
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 139/193 (72%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL LA+S + FG +++SL R VI TG+L LD+ALGIGG+P+GRI+E
Sbjct: 8 ERKKALDLAVSHIKKQFGDGAIMSLGSHSSMREISVIKTGALTLDVALGIGGIPRGRIIE 67
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E+SGK+TLA H++ AQK GG AY+D E+ALDPS A +G++ + LLI+QPDS E
Sbjct: 68 IFGPESSGKSTLATHIVANAQKAGGLAAYIDAEHALDPSYAAKIGVNVDELLISQPDSGE 127
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L++ +TL +S ++DVIV+DSVAAL+PK E+ I + Q+R+M+QALRK+ +L
Sbjct: 128 EALNIAETLARSNAVDVIVIDSVAALVPKSELEGEIGDSFIGLQARMMSQALRKLAATLA 187
Query: 245 QSHTLIIFLNQVK 257
+S+T IF+NQ++
Sbjct: 188 KSNTCAIFINQIR 200
>gi|325650908|emb|CBY89637.1| RecA protein [Rhizobium sp. R-45835=2079T1]
gi|325650924|emb|CBY89645.1| RecA protein [Rhizobium sp. R-46165=t228]
gi|325650930|emb|CBY89648.1| RecA protein [Rhizobium sp. R-46235=t497]
Length = 183
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|11387040|sp|Q9S660.1|RECA_BIFBR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|4416209|gb|AAD20261.1| RecA protein [Bifidobacterium breve]
Length = 392
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 139/196 (70%), Gaps = 7/196 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGR 121
++ AL AL+Q+ FGK S + L G + VI TGSL LD+ALGIGGLPKGR
Sbjct: 22 KRKAALDTALAQVEKSFGKGSAMRL----GDQPVQNVEVIPTGSLALDMALGIGGLPKGR 77
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD
Sbjct: 78 IVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPD 137
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 138 NGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTG 197
Query: 242 SLCQSHTLIIFLNQVK 257
+L Q+ T IF+NQ++
Sbjct: 198 ALAQAGTTAIFINQLR 213
>gi|388543742|ref|ZP_10147032.1| recombinase A [Pseudomonas sp. M47T1]
gi|388278299|gb|EIK97871.1| recombinase A [Pseudomonas sp. M47T1]
Length = 354
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDQ--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|291457715|ref|ZP_06597105.1| protein RecA [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291380768|gb|EFE88286.1| protein RecA [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 416
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 139/196 (70%), Gaps = 7/196 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGR 121
++ AL AL+Q+ FGK S + L G + VI TGSL LD+ALGIGGLPKGR
Sbjct: 44 KRKAALDTALAQVEKSFGKGSAMRL----GDQPVQNVEVIPTGSLALDMALGIGGLPKGR 99
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLALHV+ AQK GG AY+D E+ALDP+ A +G+D ++L+++QPD
Sbjct: 100 IVEIYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPD 159
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 160 NGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTG 219
Query: 242 SLCQSHTLIIFLNQVK 257
+L Q+ T IF+NQ++
Sbjct: 220 ALAQAGTTAIFINQLR 235
>gi|167623166|ref|YP_001673460.1| recombinase A [Shewanella halifaxensis HAW-EB4]
gi|189039608|sp|B0TK14.1|RECA_SHEHH RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|167353188|gb|ABZ75801.1| recA protein [Shewanella halifaxensis HAW-EB4]
Length = 355
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 137/196 (69%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALNAVLSQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQK G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVKV 258
L QS+TL+IF+NQ+++
Sbjct: 183 LKQSNTLLIFINQIRM 198
>gi|262279350|ref|ZP_06057135.1| DNA strand exchange and recombination protein RecA [Acinetobacter
calcoaceticus RUH2202]
gi|262259701|gb|EEY78434.1| DNA strand exchange and recombination protein RecA [Acinetobacter
calcoaceticus RUH2202]
Length = 348
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|299769713|ref|YP_003731739.1| recombinase A [Acinetobacter oleivorans DR1]
gi|298699801|gb|ADI90366.1| recombinase A [Acinetobacter oleivorans DR1]
Length = 348
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|338930773|emb|CBX55454.1| recombinase A [Bradyrhizobium sp. UPP231]
Length = 186
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 134/185 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKSDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ ++ Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMDDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|169883804|gb|ACA97998.1| recombination protein A, partial [Rhizobium mongolense]
gi|169883806|gb|ACA97999.1| recombination protein A, partial [Rhizobium mongolense]
gi|169883808|gb|ACA98000.1| recombination protein A, partial [Rhizobium gallicum]
gi|169883810|gb|ACA98001.1| recombination protein A, partial [Rhizobium gallicum]
Length = 167
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 125/162 (77%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
R ISTGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D
Sbjct: 1 RDRTISTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDA 60
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI
Sbjct: 61 EHALDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEI 120
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 EGEMGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 162
>gi|431801194|ref|YP_007228097.1| recombinase A [Pseudomonas putida HB3267]
gi|430791959|gb|AGA72154.1| recombinase A [Pseudomonas putida HB3267]
Length = 355
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|62185564|ref|YP_220349.1| recombinase A [Chlamydophila abortus S26/3]
gi|76363323|sp|Q5L4P3.1|RECA_CHLAB RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|62148631|emb|CAH64403.1| recombinase A [Chlamydophila abortus S26/3]
Length = 349
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 137/192 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL A++ + FG S++SL + S I TG+L LDLALGIGG+PKGRIVEI
Sbjct: 6 RKKALEAAIAYIEKQFGSGSIMSLGKHSASHEISTIKTGALSLDLALGIGGVPKGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLA H++ AQK+GG AY+D E+ALDPS A +G + +L+I+QPD E+
Sbjct: 66 FGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPSYASLIGANIHDLMISQPDCGED 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
LS+ + L +SG++DVIV+DSVAAL+PK E+ I ++ Q+R+M+QALRK+ +L +
Sbjct: 126 ALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLTATLAR 185
Query: 246 SHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 186 SQTCAIFINQIR 197
>gi|293609243|ref|ZP_06691545.1| recA protein [Acinetobacter sp. SH024]
gi|375135062|ref|YP_004995712.1| recombinase A [Acinetobacter calcoaceticus PHEA-2]
gi|427423493|ref|ZP_18913645.1| RecA protein [Acinetobacter baumannii WC-136]
gi|292827695|gb|EFF86058.1| recA protein [Acinetobacter sp. SH024]
gi|325122507|gb|ADY82030.1| recombinase A [Acinetobacter calcoaceticus PHEA-2]
gi|425699726|gb|EKU69331.1| RecA protein [Acinetobacter baumannii WC-136]
Length = 348
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|134098318|ref|YP_001103979.1| DNA recombination/repair protein [Saccharopolyspora erythraea NRRL
2338]
gi|291004262|ref|ZP_06562235.1| DNA recombination/repair [Saccharopolyspora erythraea NRRL 2338]
gi|166220675|sp|A4FAH9.1|RECA_SACEN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|133910941|emb|CAM01054.1| DNA recombination/repair [Saccharopolyspora erythraea NRRL 2338]
Length = 346
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 140/194 (72%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
K AL LAL+Q+ +GK S++ R R P VI TGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 KGKALELALAQIDKQYGKGSVM---RLGDETRAPIEVIPTGSISLDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKT++ALH + AQKLGG A++D E+ALDP A+A+G+D ++LL++QPD+
Sbjct: 64 EVYGPESSGKTSVALHAVANAQKLGGTAAFIDAEHALDPEYAKAIGVDTDSLLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +L
Sbjct: 124 EQALEIADMLIRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTSAL 183
Query: 244 CQSHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 184 YNAKTTAIFINQLR 197
>gi|115498179|gb|ABI98669.1| RecA, partial [Rhizobium vignae]
Length = 183
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 130/178 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L +STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL
Sbjct: 1 FGKGSIMKLGSNENIVEIETVSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DTL +SG++D
Sbjct: 61 IAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGERALEITDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+V+DSVAAL P+ EI Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVIDSVAALTPRAEIEGETGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 178
>gi|336317961|gb|AEI52517.1| recombinase A protein, partial [Rhizobium tropici]
Length = 183
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLAASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|330444009|ref|YP_004376995.1| recA protein [Chlamydophila pecorum E58]
gi|197091910|gb|ACH42162.1| RecA [Chlamydophila pecorum E58]
gi|328807119|gb|AEB41292.1| recA protein [Chlamydophila pecorum E58]
Length = 348
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 139/192 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL A++ + FG S++SL + + VI TG+L LDLALGIGG+PKGRIVEI
Sbjct: 6 RKKALEAAIAYIEKQFGSGSVMSLGKHSATHEISVIKTGALSLDLALGIGGVPKGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLA H++ AQK GG AY+D E+ALDPS A +G++ ++L+I+QPD E+
Sbjct: 66 FGPESSGKTTLATHIVANAQKKGGIAAYIDAEHALDPSYAALIGVNVDDLMISQPDCGED 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
LS+ + L +SG++DV+V+DSVAAL+PK E+ I ++ Q+R+M+QALRK+ +L +
Sbjct: 126 ALSIAELLARSGAVDVLVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLTSTLAR 185
Query: 246 SHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 186 SQTCAIFINQIR 197
>gi|115498195|gb|ABI98677.1| RecA [Rhizobium sp. CCBAU 65255]
Length = 183
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 130/178 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L ISTGSL LD ALG+GGLPKGRI+EIYG E+SGKTTLAL
Sbjct: 1 FGKGSVMELGSNENVIEIETISTGSLGLDTALGVGGLPKGRIIEIYGPESSGKTTLALQT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DTL +SG++D
Sbjct: 61 IAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 178
>gi|325277019|ref|ZP_08142684.1| recombinase A [Pseudomonas sp. TJI-51]
gi|324097855|gb|EGB96036.1| recombinase A [Pseudomonas sp. TJI-51]
Length = 355
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|329943334|ref|ZP_08292108.1| protein RecA [Chlamydophila psittaci Cal10]
gi|332287910|ref|YP_004422811.1| recombinase A [Chlamydophila psittaci 6BC]
gi|384451081|ref|YP_005663681.1| recA protein [Chlamydophila psittaci 6BC]
gi|384452065|ref|YP_005664663.1| recombinase A [Chlamydophila psittaci 01DC11]
gi|384453039|ref|YP_005665636.1| recombinase A [Chlamydophila psittaci 08DC60]
gi|384454018|ref|YP_005666614.1| recombinase A [Chlamydophila psittaci C19/98]
gi|384454997|ref|YP_005667592.1| recombinase A [Chlamydophila psittaci 02DC15]
gi|392377140|ref|YP_004064918.1| recombinase A [Chlamydophila psittaci RD1]
gi|406592901|ref|YP_006740081.1| protein RecA [Chlamydia psittaci CP3]
gi|406593948|ref|YP_006741127.1| protein RecA [Chlamydia psittaci NJ1]
gi|406594774|ref|YP_006742162.1| protein RecA [Chlamydia psittaci MN]
gi|407454578|ref|YP_006733686.1| protein RecA [Chlamydia psittaci 84/55]
gi|407455838|ref|YP_006734729.1| protein RecA [Chlamydia psittaci GR9]
gi|407457264|ref|YP_006735837.1| protein RecA [Chlamydia psittaci VS225]
gi|407458576|ref|YP_006736881.1| protein RecA [Chlamydia psittaci WS/RT/E30]
gi|407459819|ref|YP_006737922.1| protein RecA [Chlamydia psittaci M56]
gi|407461192|ref|YP_006738967.1| protein RecA [Chlamydia psittaci WC]
gi|410858923|ref|YP_006974863.1| recombinase A [Chlamydia psittaci 01DC12]
gi|449071642|ref|YP_007438722.1| recombinase A [Chlamydophila psittaci Mat116]
gi|313848483|emb|CBY17487.1| recombinase A [Chlamydophila psittaci RD1]
gi|325506502|gb|ADZ18140.1| recombinase A [Chlamydophila psittaci 6BC]
gi|328814881|gb|EGF84871.1| protein RecA [Chlamydophila psittaci Cal10]
gi|328915175|gb|AEB56008.1| recA protein [Chlamydophila psittaci 6BC]
gi|334692799|gb|AEG86018.1| recombinase A [Chlamydophila psittaci C19/98]
gi|334693775|gb|AEG86993.1| recombinase A [Chlamydophila psittaci 01DC11]
gi|334694754|gb|AEG87971.1| recombinase A [Chlamydophila psittaci 02DC15]
gi|334695728|gb|AEG88944.1| recombinase A [Chlamydophila psittaci 08DC60]
gi|405781337|gb|AFS20087.1| protein RecA [Chlamydia psittaci 84/55]
gi|405782381|gb|AFS21130.1| protein RecA [Chlamydia psittaci GR9]
gi|405783206|gb|AFS21954.1| protein RecA [Chlamydia psittaci MN]
gi|405784525|gb|AFS23272.1| protein RecA [Chlamydia psittaci VS225]
gi|405784859|gb|AFS23605.1| protein RecA [Chlamydia psittaci WS/RT/E30]
gi|405785964|gb|AFS24709.1| protein RecA [Chlamydia psittaci M56]
gi|405787498|gb|AFS26242.1| protein RecA [Chlamydia psittaci WC]
gi|405788773|gb|AFS27516.1| protein RecA [Chlamydia psittaci CP3]
gi|405789820|gb|AFS28562.1| protein RecA [Chlamydia psittaci NJ1]
gi|410811818|emb|CCO02473.1| recombinase A [Chlamydia psittaci 01DC12]
gi|449040150|gb|AGE75574.1| recombinase A [Chlamydophila psittaci Mat116]
Length = 349
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 137/192 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL A++ + FG S++SL + S I TG+L LDLALGIGG+PKGRIVEI
Sbjct: 6 RKKALEAAIAYIEKQFGSGSIMSLGKHSASHEISTIKTGALSLDLALGIGGVPKGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLA H++ AQK+GG AY+D E+ALDPS A +G + +L+I+QPD E+
Sbjct: 66 FGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPSYASLIGANINDLMISQPDCGED 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
LS+ + L +SG++DVIV+DSVAAL+PK E+ I ++ Q+R+M+QALRK+ +L +
Sbjct: 126 ALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLTATLAR 185
Query: 246 SHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 186 SQTCAIFINQIR 197
>gi|89894689|ref|YP_518176.1| hypothetical protein DSY1943 [Desulfitobacterium hafniense Y51]
gi|423074673|ref|ZP_17063398.1| RecA protein [Desulfitobacterium hafniense DP7]
gi|89334137|dbj|BAE83732.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361854362|gb|EHL06433.1| RecA protein [Desulfitobacterium hafniense DP7]
Length = 346
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 140/192 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG L +D+ALG+GG+P+GR++EI
Sbjct: 6 KLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRVIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+ EAQKLGG A++D E+ALDP A+A+G++ +NLL++QPD+ E
Sbjct: 66 YGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDVI++DSVAAL+P+ EI + + +R+M+QALRK+ ++ +
Sbjct: 126 ALEICEALVRSGAIDVIIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISK 185
Query: 246 SHTLIIFLNQVK 257
S+T +IF+NQ++
Sbjct: 186 SNTCVIFINQIR 197
>gi|424825608|ref|ZP_18250595.1| recombinase A [Chlamydophila abortus LLG]
gi|333410707|gb|EGK69694.1| recombinase A [Chlamydophila abortus LLG]
Length = 349
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 137/192 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL A++ + FG S++SL + S I TG+L LDLALGIGG+PKGRIVEI
Sbjct: 6 RKKALEAAIAYIEKQFGSGSIMSLGKHSASHEISTIKTGALSLDLALGIGGVPKGRIVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLA H++ AQK+GG AY+D E+ALDPS A +G + +L+I+QPD E+
Sbjct: 66 FGPESSGKTTLATHIVANAQKMGGVAAYIDAEHALDPSYASLIGANINDLMISQPDCGED 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
LS+ + L +SG++DVIV+DSVAAL+PK E+ I ++ Q+R+M+QALRK+ +L +
Sbjct: 126 ALSIAELLARSGAVDVIVIDSVAALVPKSELEGDIGDVHVGLQARMMSQALRKLTATLAR 185
Query: 246 SHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 186 SQTCAIFINQIR 197
>gi|226348061|gb|ACO50384.1| RecA [Rhizobium sullae]
Length = 159
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 124/159 (77%)
Query: 100 VISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENA 159
ISTGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLAL I EAQK GG CA++D E+A
Sbjct: 1 TISTGSLSLDIALGIGGLPKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHA 60
Query: 160 LDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVP 219
LDP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI
Sbjct: 61 LDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGE 120
Query: 220 INGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 MGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 159
>gi|254486860|ref|ZP_05100065.1| protein RecA [Roseobacter sp. GAI101]
gi|214043729|gb|EEB84367.1| protein RecA [Roseobacter sp. GAI101]
Length = 356
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 140/200 (70%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ K +K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 10 DNKKQAEKQKALDSALAQIERQFGKGSIMKLGAPGAIQDIKSSSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 70 MGRIIEIYGPESSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPQYARKLGVDIDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTGSISRSNCMVIFINQIRM 209
>gi|219669130|ref|YP_002459565.1| recA protein [Desulfitobacterium hafniense DCB-2]
gi|219539390|gb|ACL21129.1| recA protein [Desulfitobacterium hafniense DCB-2]
Length = 346
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 140/192 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG L +D+ALG+GG+P+GR++EI
Sbjct: 6 KLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRVIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+ EAQKLGG A++D E+ALDP A+A+G++ +NLL++QPD+ E
Sbjct: 66 YGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDVI++DSVAAL+P+ EI + + +R+M+QALRK+ ++ +
Sbjct: 126 ALEICEALVRSGAIDVIIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISK 185
Query: 246 SHTLIIFLNQVK 257
S+T +IF+NQ++
Sbjct: 186 SNTCVIFINQIR 197
>gi|585798|sp|Q07447.1|RECA_PSEPU RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|294375|gb|AAC36872.1| recA protein [Pseudomonas putida]
gi|1617593|gb|AAB16921.1| RecA [Pseudomonas putida]
gi|740001|prf||2004287A recA gene
Length = 355
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|258516256|ref|YP_003192478.1| recA protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779961|gb|ACV63855.1| recA protein [Desulfotomaculum acetoxidans DSM 771]
Length = 343
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 143/196 (72%), Gaps = 3/196 (1%)
Query: 64 MQKDN--ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
MQ+D AL AL+ + FGK +++ L ++ VISTG L LD+ALGIGG+P+GR
Sbjct: 1 MQQDKQKALERALADIEKQFGKGAVMKLGESP-AKNVEVISTGVLSLDIALGIGGVPRGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
+VEIYG E+SGKTT+ALHV+ EAQK GG A++D E+ALDP+ A+ +G+D ENLL++QPD
Sbjct: 60 VVEIYGPESSGKTTVALHVVAEAQKDGGMAAFVDAEHALDPTYAQKLGVDIENLLVSQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + + L +SG++DVIVVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 120 TGEQALEIAEALVRSGAVDVIVVDSVAALVPRAEIEGDMGDSHVGLQARLMSQALRKLTG 179
Query: 242 SLCQSHTLIIFLNQVK 257
+ +S+ IIF+NQ++
Sbjct: 180 VVSKSNCTIIFINQLR 195
>gi|53802433|ref|YP_112918.1| recombinase A [Methylococcus capsulatus str. Bath]
gi|59798161|sp|Q60BS8.1|RECA_METCA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|53756194|gb|AAU90485.1| recA protein [Methylococcus capsulatus str. Bath]
Length = 347
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 138/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
K AL ALSQ+ FGK S++ + R VI TGSL LD+ALG GGLP+GRIVE
Sbjct: 4 NKRKALGAALSQIEKQFGKGSVMRMGDVAAVRDIDVIPTGSLALDIALGCGGLPRGRIVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK GG A++D E+ALDP AE +G++ ++LL++QPD+ E
Sbjct: 64 IYGPESSGKTTLTLEVIAQAQKTGGVAAFVDAEHALDPVYAEKIGVNLDDLLVSQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG +DV+V+DSVAAL PK E+ + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEIADVLVRSGGVDVVVIDSVAALTPKAELEGEMGDSHMGLQARLMSQALRKLTANIK 183
Query: 245 QSHTLIIFLNQVKV 258
+S+TL+IF+NQ+++
Sbjct: 184 RSNTLVIFINQIRM 197
>gi|119026042|ref|YP_909887.1| recombinase A [Bifidobacterium adolescentis ATCC 15703]
gi|118765626|dbj|BAF39805.1| protein recA (Recombinase A) [Bifidobacterium adolescentis ATCC
15703]
Length = 394
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 136/192 (70%), Gaps = 7/192 (3%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 40 ALDTALAQVEKSFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 95
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 96 YGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 155
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 156 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 215
Query: 246 SHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 216 AGTTAIFINQLR 227
>gi|325512777|gb|ADZ23577.1| RecA [Bradyrhizobium sp. CCBAU 25437]
Length = 180
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 134/178 (75%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALH
Sbjct: 1 FGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLALHT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DTL +SG++D
Sbjct: 61 VAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALEICDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINKSNTMVIFINQIRM 178
>gi|145590013|ref|YP_001156610.1| recA protein [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145048419|gb|ABP35046.1| RecA protein [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 363
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 138/193 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L S+ V+S+GSL LD+ALG+GGL +GR++EI
Sbjct: 21 KQKALTAALAQIEKQFGKGSIMRLGDAEISQDIQVVSSGSLGLDIALGVGGLARGRVIEI 80
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH I E QKLGG CA++D E+ALD A +G+D NLLI+QPD+ E
Sbjct: 81 YGPESSGKTTLTLHAIAEMQKLGGTCAFIDAEHALDVQYASRLGVDVNNLLISQPDTGEQ 140
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SGSID+IV+DSVAAL+P+ EI + Q+R+M+QALRK+ ++ +
Sbjct: 141 ALEIADALVRSGSIDLIVIDSVAALVPRAEIEGDMGDSLPGLQARLMSQALRKLTGAIKR 200
Query: 246 SHTLIIFLNQVKV 258
++T +IF+NQ+++
Sbjct: 201 TNTTVIFINQIRM 213
>gi|115498187|gb|ABI98673.1| RecA [Sinorhizobium sp. CCBAU 33036]
Length = 182
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 130/178 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L +STGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLAL
Sbjct: 1 FGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLALQT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+ID
Sbjct: 61 IAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAID 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL+P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 121 VLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 178
>gi|295395410|ref|ZP_06805609.1| recombination protein A [Brevibacterium mcbrellneri ATCC 49030]
gi|294971732|gb|EFG47608.1| recombination protein A [Brevibacterium mcbrellneri ATCC 49030]
Length = 350
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 135/194 (69%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL ALSQ+ +GK S++ R R P+ I TGSL LD+ALGIGGLP+GR++
Sbjct: 15 KQKALETALSQVERQYGKGSIM---RLGSQERQPIEAIPTGSLALDVALGIGGLPRGRVI 71
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A +G+D + LL++QPD+
Sbjct: 72 EVYGPESSGKTTVALHAVANAQKAGGLAAFIDAEHALDPEYAAKLGVDTDQLLVSQPDTG 131
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 132 EQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 191
Query: 244 CQSHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 192 AHSKTTAIFINQLR 205
>gi|226953077|ref|ZP_03823541.1| recombinase A [Acinetobacter sp. ATCC 27244]
gi|226836169|gb|EEH68552.1| recombinase A [Acinetobacter sp. ATCC 27244]
Length = 347
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|298103540|emb|CBH19581.1| recombinase A [Mesorhizobium sp. GAC133P]
Length = 187
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 130/177 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L + TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH
Sbjct: 11 FGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHT 70
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+ID
Sbjct: 71 VAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAID 130
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ++
Sbjct: 131 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIR 187
>gi|451946028|ref|YP_007466623.1| protein RecA [Desulfocapsa sulfexigens DSM 10523]
gi|451905376|gb|AGF76970.1| protein RecA [Desulfocapsa sulfexigens DSM 10523]
Length = 346
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 142/200 (71%), Gaps = 5/200 (2%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGS--RRGPVISTGSLKLDLALGIGGLP 118
A K+ ++ A+SQ+ FGK S++ R G+ + PV+STGSL LD+ALG+GG P
Sbjct: 2 ATAKDKEGSVDNAISQIQRQFGKGSIM---RLGGATVEKIPVVSTGSLSLDIALGVGGFP 58
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI EIYG E+SGKTTLALH + EAQK GG A++D E+ALD + A+ +G+D +NLL++
Sbjct: 59 KGRIAEIYGPESSGKTTLALHAVAEAQKKGGTAAFIDAEHALDTAYAQRLGVDVDNLLVS 118
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD E L + + L +SG +D+IV+DSVAAL+PK EI + + Q+R+M+QA+RK
Sbjct: 119 QPDFGEQALDIAEILIRSGGVDIIVIDSVAALVPKAEIDGNVGDSHMGLQARLMSQAMRK 178
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
L +S+T++IF+NQ+++
Sbjct: 179 FTGVLSRSNTILIFINQIRM 198
>gi|104783104|ref|YP_609602.1| recombinase A [Pseudomonas entomophila L48]
gi|122402255|sp|Q1I6B7.1|RECA_PSEE4 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|95112091|emb|CAK16818.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Pseudomonas entomophila L48]
Length = 355
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|385682125|ref|ZP_10056053.1| recombination protein RecA [Amycolatopsis sp. ATCC 39116]
Length = 346
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 139/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
KD AL LAL+Q+ +GK S++ L R P VI TG++ LD+ALGIGGLP+GR++
Sbjct: 7 KDKALELALAQIDKQYGKGSVMRLGE---ETRPPIGVIPTGAIALDIALGIGGLPRGRVI 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKALGVDTDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D++V+DSVAAL+P+ EI + + Q+R+M+QALRKI +L
Sbjct: 124 EQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGAL 183
Query: 244 CQSHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 184 SNSGTTAIFINQLR 197
>gi|329849340|ref|ZP_08264186.1| protein RecA [Asticcacaulis biprosthecum C19]
gi|328841251|gb|EGF90821.1| protein RecA [Asticcacaulis biprosthecum C19]
Length = 360
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 140/196 (71%), Gaps = 4/196 (2%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRI 122
+K AL AL+Q+ FGK S++ L G + V ISTGSL LD+ALGIGGLPKGR+
Sbjct: 15 EKQRALEAALAQIDRAFGKGSVMRLG--VGGKIAEVESISTGSLGLDIALGIGGLPKGRV 72
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTLALH + E QK GG A++D E+ALDP+ A +G++ E LL++QPD+
Sbjct: 73 IEIYGPESSGKTTLALHTVAEIQKAGGTAAFVDAEHALDPTYAGKLGVNLEELLVSQPDN 132
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S
Sbjct: 133 GEQALEITDTLVRSGAVDIVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTGS 192
Query: 243 LCQSHTLIIFLNQVKV 258
+ +S ++IF+NQ+++
Sbjct: 193 ISKSKCIVIFINQIRM 208
>gi|443469641|ref|ZP_21059795.1| RecA protein [Pseudomonas pseudoalcaligenes KF707]
gi|442899093|gb|ELS25624.1| RecA protein [Pseudomonas pseudoalcaligenes KF707]
Length = 351
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQKLG CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKLGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|398345389|ref|ZP_10530092.1| recombinase A [Leptospira inadai serovar Lyme str. 10]
Length = 393
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 142/200 (71%), Gaps = 4/200 (2%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
DD+K M A+ A++Q+ FGK S++ L + PVI TGSL LD+ALGIGG P
Sbjct: 42 DDSKKM----AIDQAMTQIEKQFGKGSIMRLGAASATNVMPVIPTGSLDLDIALGIGGYP 97
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRIVEIYG E+SGKTTL L I EAQK GG A++D E+ALDPS A+ +G++ E LL++
Sbjct: 98 LGRIVEIYGPESSGKTTLTLAAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNLEELLVS 157
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + ++L +S +ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 158 QPDNGEEALEICESLVRSNAIDIIVVDSVAALVPKAEIEGDMGDAHMGLQARLMSQALRK 217
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ ++ +S T+++F+NQ+++
Sbjct: 218 LTGTISKSRTVVVFINQIRM 237
>gi|294650666|ref|ZP_06728020.1| recombination protein A [Acinetobacter haemolyticus ATCC 19194]
gi|292823457|gb|EFF82306.1| recombination protein A [Acinetobacter haemolyticus ATCC 19194]
Length = 347
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKTGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|392394096|ref|YP_006430698.1| protein RecA [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525174|gb|AFM00905.1| protein RecA [Desulfitobacterium dehalogenans ATCC 51507]
Length = 346
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 140/192 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +ALSQ+ FGK S++ L VI TG L +D+ALG+GG+P+GRI+EI
Sbjct: 6 KLKALDMALSQIEKQFGKGSIMRLGEASAKMAVEVIPTGCLAIDIALGVGGVPRGRIIEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALH+ EAQKLGG A++D E+ALDP A+A+G++ +NLL++QPD+ E
Sbjct: 66 YGPESSGKTTVALHIAAEAQKLGGVAAFIDAEHALDPVYAKALGVNIDNLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDV+++DSVAAL+P+ EI + + +R+M+QALRK+ ++ +
Sbjct: 126 ALEICEALVRSGAIDVVIIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISK 185
Query: 246 SHTLIIFLNQVK 257
S+T +IF+NQ++
Sbjct: 186 SNTCVIFINQIR 197
>gi|417877996|ref|ZP_12522634.1| recombinase A [Acinetobacter baumannii ABNIH3]
gi|342233972|gb|EGT98668.1| recombinase A [Acinetobacter baumannii ABNIH3]
Length = 349
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRI 196
>gi|260427837|ref|ZP_05781816.1| protein RecA [Citreicella sp. SE45]
gi|260422329|gb|EEX15580.1| protein RecA [Citreicella sp. SE45]
Length = 359
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 138/200 (69%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D K + AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 10 DSKKNADRQKALDSALAQIERQFGKGSIMKLGGDNAMKDIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G+D + LLI+
Sbjct: 70 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVDLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG++ ++VVDSVAAL PK E+ + +R+M+QA+RK
Sbjct: 130 QPDTGEQALEITDTLVRSGAVSLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTGSISRSNCMVIFINQIRM 209
>gi|227875221|ref|ZP_03993363.1| recombination protein A [Mobiluncus mulieris ATCC 35243]
gi|269978112|ref|ZP_06185062.1| protein RecA [Mobiluncus mulieris 28-1]
gi|306818483|ref|ZP_07452206.1| recombination protein A [Mobiluncus mulieris ATCC 35239]
gi|307700702|ref|ZP_07637727.1| RecA protein [Mobiluncus mulieris FB024-16]
gi|227844126|gb|EEJ54293.1| recombination protein A [Mobiluncus mulieris ATCC 35243]
gi|269933621|gb|EEZ90205.1| protein RecA [Mobiluncus mulieris 28-1]
gi|304648656|gb|EFM45958.1| recombination protein A [Mobiluncus mulieris ATCC 35239]
gi|307613697|gb|EFN92941.1| RecA protein [Mobiluncus mulieris FB024-16]
Length = 372
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 137/197 (69%), Gaps = 3/197 (1%)
Query: 64 MQKDN---ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKG 120
M KD+ AL AL Q+ FGK S++ L + VI TGS+ LD+ALGIGGLP+G
Sbjct: 1 MAKDDRAKALETALGQIDKQFGKGSVMRLGDNAAGKDIAVIPTGSVALDVALGIGGLPRG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+ +G+D +NLL++QP
Sbjct: 61 RIVEIYGPESSGKTTVALHAVANAQKAGGNAAFIDAEHALDPVYAQKLGVDIDNLLVSQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + D L +SG +D+IV+DSVAAL+PK EI + + Q+R+M+QALRKI
Sbjct: 121 DTGEQALEIADMLIRSGGLDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKIT 180
Query: 241 YSLCQSHTLIIFLNQVK 257
+L + T IF+NQ++
Sbjct: 181 GALSATGTTAIFINQLR 197
>gi|163746279|ref|ZP_02153637.1| recombinase A [Oceanibulbus indolifex HEL-45]
gi|161380164|gb|EDQ04575.1| recombinase A [Oceanibulbus indolifex HEL-45]
Length = 356
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 139/200 (69%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D K +K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 10 DSKKTAEKQKALDSALAQIERQFGKGSIMKLGAEGAVQDIRASSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A+ +G+D + LLI+
Sbjct: 70 MGRIIEIYGPESSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPQYAKKLGVDIDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG++++++VDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGEMGDSSVGVQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTGSISRSNCMVIFINQIRM 209
>gi|365131217|ref|ZP_09341784.1| protein RecA [Subdoligranulum sp. 4_3_54A2FAA]
gi|363618883|gb|EHL70220.1| protein RecA [Subdoligranulum sp. 4_3_54A2FAA]
Length = 392
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 144/193 (74%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +AL AL+Q+ FGK +++ L + + + ISTGS+ LD+ALGIGGLP+GRIVEI
Sbjct: 17 KKSALETALAQIEKQFGKGAVMKLGQNV-TMQVDAISTGSISLDMALGIGGLPRGRIVEI 75
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG EASGKTTLALH I EAQK GG A++DVE+ALDP A+A+G+D ++LL++QPD+ E
Sbjct: 76 YGPEASGKTTLALHCIAEAQKGGGEVAFIDVEHALDPVYAKALGVDIDSLLVSQPDTGEQ 135
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+ID +VVDSVAA++P+ EI + + Q+R+M+QA+RK+ + +
Sbjct: 136 ALEICEALVRSGAIDCVVVDSVAAMVPRAEIEGEMGDAHVGLQARLMSQAMRKLTGIIGK 195
Query: 246 SHTLIIFLNQVKV 258
+ T++IF+NQ+++
Sbjct: 196 TGTVVIFINQLRL 208
>gi|339486208|ref|YP_004700736.1| recombinase A [Pseudomonas putida S16]
gi|338837051|gb|AEJ11856.1| recombinase A [Pseudomonas putida S16]
Length = 355
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|336317951|gb|AEI52512.1| recombinase A protein, partial [Rhizobium leucaenae]
Length = 183
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|59798225|sp|Q6AE00.2|RECA_LEIXX RecName: Full=Protein RecA; AltName: Full=Recombinase A
Length = 357
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL AL+Q+ FGK S++ R R PV + TGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 REKALVTALAQIDRQFGKGSVM---RLGSDERAPVEVVPTGSIALDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A +G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPDYARKLGVDIDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSID+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +L
Sbjct: 124 EQALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAL 183
Query: 244 CQSHTLIIFLNQVK 257
Q++T +IF+NQ++
Sbjct: 184 SQTNTTMIFINQLR 197
>gi|262376180|ref|ZP_06069410.1| recA protein [Acinetobacter lwoffii SH145]
gi|262308781|gb|EEY89914.1| recA protein [Acinetobacter lwoffii SH145]
Length = 347
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KNKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I E QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDMIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|260890264|ref|ZP_05901527.1| protein RecA [Leptotrichia hofstadii F0254]
gi|260859884|gb|EEX74384.1| protein RecA [Leptotrichia hofstadii F0254]
Length = 349
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 139/190 (73%), Gaps = 5/190 (2%)
Query: 70 LRLALSQLANDFGKESMLSL--KRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
L LAL Q+ D+G +++ L + R ISTGSL LD+ALGIGG+P+GRIVEIYG
Sbjct: 2 LDLALKQIQKDYGDGAVMKLGENQKMNIR---AISTGSLNLDIALGIGGVPRGRIVEIYG 58
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLALH+I EAQK GG A++D E+ALDP A+A+G++ + LLI+QPD+ E L
Sbjct: 59 AESSGKTTLALHIIAEAQKAGGTVAFIDAEHALDPVYAKALGVNIDELLISQPDTGEQAL 118
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ D L +SG++DVIVVDSVAAL+PK EI + Q+R+M++ALRK+ S+ +S
Sbjct: 119 EISDMLVRSGAMDVIVVDSVAALVPKAEIEGEMGDQQMGLQARLMSKALRKLTGSISKSD 178
Query: 248 TLIIFLNQVK 257
T++IF+NQ++
Sbjct: 179 TVMIFINQIR 188
>gi|380703512|gb|AFD96725.1| RecA, partial [Rhizobium yanglingense]
Length = 176
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
ISTGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+AL
Sbjct: 17 ISTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHAL 76
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI +
Sbjct: 77 DPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEM 136
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 137 GDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 174
>gi|296129392|ref|YP_003636642.1| recA protein [Cellulomonas flavigena DSM 20109]
gi|296021207|gb|ADG74443.1| recA protein [Cellulomonas flavigena DSM 20109]
Length = 346
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
+ AL ALSQ+ FGK S++ R R PV I TGS+ LD+ALGIGGLP+GRI+
Sbjct: 7 RSKALEAALSQIDRQFGKGSVM---RLGDEGRAPVEVIPTGSIALDVALGIGGLPRGRII 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQ+ GG A++D E+ALDP A+ +G+D + LL++QPD+
Sbjct: 64 EVYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDNG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L ++DTL +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 124 EQALEIMDTLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 183
Query: 244 CQSHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 184 NASGTTAIFINQLR 197
>gi|335040835|ref|ZP_08533956.1| Protein recA [Caldalkalibacillus thermarum TA2.A1]
gi|334179270|gb|EGL81914.1| Protein recA [Caldalkalibacillus thermarum TA2.A1]
Length = 352
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 138/189 (73%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL +AL Q+ FGK S++ L + + IS+GSL LD+ALG+GG P+GRIVEIYG
Sbjct: 8 ALDMALRQIEKQFGKGSIMKLGEAAVNNQVSTISSGSLALDIALGVGGYPRGRIVEIYGP 67
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I EAQK+GG A++D E+ALDP A+ +G++ + LL++QPD+ E L
Sbjct: 68 ESSGKTTVALHAIAEAQKMGGQAAFIDAEHALDPQYAKNLGVNIDELLLSQPDTGEQALE 127
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRK+ ++ +S T
Sbjct: 128 IAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGAISKSKT 187
Query: 249 LIIFLNQVK 257
+ IF+NQ++
Sbjct: 188 IAIFINQIR 196
>gi|254292634|ref|YP_003058657.1| recA protein [Hirschia baltica ATCC 49814]
gi|254041165|gb|ACT57960.1| recA protein [Hirschia baltica ATCC 49814]
Length = 364
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ +FGK S++ L S +STGSL LD+ALGIGGLPKGRI+
Sbjct: 14 MDKQKALETALGQIERNFGKGSIMRLGDN-ASMDVEAVSTGSLSLDIALGIGGLPKGRII 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A +G+D +LL++QPD+
Sbjct: 73 EIYGPESSGKTTLALHCIAEAQKNGGVAAFVDAEHALDPIYAGKLGVDLGDLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 133 EQSLEIADTLVRSGAVDVLVIDSVAALTPRAELEGEMGDSLPGLQARLMSQALRKLTGSI 192
Query: 244 CQSHTLIIFLNQVKV 258
+S ++IF+NQ+++
Sbjct: 193 SKSKCMVIFINQIRM 207
>gi|256822657|ref|YP_003146620.1| recA protein [Kangiella koreensis DSM 16069]
gi|256796196|gb|ACV26852.1| recA protein [Kangiella koreensis DSM 16069]
Length = 346
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ L +R ISTGSL LD+ALGIGGLPKGR+VEI
Sbjct: 5 KKKALGAALTQIERQFGKGSIMRLGDNSAARGIGTISTGSLGLDIALGIGGLPKGRVVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I QK GG A++D E+ALDP+ AE +G++ ++L+++QPD+ E
Sbjct: 65 YGPESSGKTTLALQAIASCQKDGGTAAFVDAEHALDPTYAEKLGVNLDDLIVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++VVDSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+TL +F+NQ+++
Sbjct: 185 SNTLCVFINQIRM 197
>gi|146741033|emb|CAJ44540.1| recombinase A [Bradyrhizobium sp. KFR22]
gi|338930789|emb|CBX55462.1| recombinase A [Bradyrhizobium sp. UPP331]
gi|397172863|emb|CCC58477.1| recombinase A, partial [Bradyrhizobium sp. ARR394]
gi|397172865|emb|CCC58478.1| recombinase A, partial [Bradyrhizobium sp. ARR401]
gi|397172873|emb|CCC58482.1| recombinase A, partial [Bradyrhizobium sp. ARR494]
gi|397172875|emb|CCC58483.1| recombinase A, partial [Bradyrhizobium sp. ARR534]
gi|397172877|emb|CCC58484.1| recombinase A, partial [Bradyrhizobium sp. ARR549]
gi|397172883|emb|CCC58487.1| recombinase A, partial [Bradyrhizobium sp. ARR595]
gi|397172887|emb|CCC58489.1| recombinase A, partial [Bradyrhizobium sp. ARR603]
gi|397172889|emb|CCC58490.1| recombinase A, partial [Bradyrhizobium sp. ARR660]
gi|397172891|emb|CCC58491.1| recombinase A, partial [Bradyrhizobium sp. ARR678]
gi|397172893|emb|CCC58492.1| recombinase A, partial [Bradyrhizobium sp. ARR679]
Length = 186
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKSDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|154488807|ref|ZP_02029656.1| hypothetical protein BIFADO_02115 [Bifidobacterium adolescentis
L2-32]
gi|154082944|gb|EDN81989.1| RecA protein [Bifidobacterium adolescentis L2-32]
Length = 380
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 136/192 (70%), Gaps = 7/192 (3%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 26 ALDTALAQVEKSFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 81
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 82 YGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 141
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 142 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 201
Query: 246 SHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 202 AGTTAIFINQLR 213
>gi|146741031|emb|CAJ44539.1| recombinase A [Bradyrhizobium sp. F3b]
Length = 186
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 132/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGR+V
Sbjct: 2 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDIALGVGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+SHT
Sbjct: 182 NKSHT 186
>gi|359730847|gb|AEV55426.1| recombinase A [Bradyrhizobium sp. ORS 3682]
gi|359730849|gb|AEV55427.1| recombinase A [Bradyrhizobium sp. ORS 3684]
gi|359730851|gb|AEV55428.1| recombinase A [Bradyrhizobium sp. ORS 3683]
Length = 187
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 3 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 63 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 123 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 182
Query: 244 CQSHT 248
+S+T
Sbjct: 183 NKSNT 187
>gi|402830710|ref|ZP_10879406.1| RecA protein [Capnocytophaga sp. CM59]
gi|402283910|gb|EJU32417.1| RecA protein [Capnocytophaga sp. CM59]
Length = 386
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+LAL +L FGK +++ L + + VI +GSL LD+ALG+GG P+GR++EI
Sbjct: 18 KAQALKLALQRLEKSFGKGTVMRLGDKV-AEKVEVIPSGSLGLDIALGVGGYPRGRVIEI 76
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G+E+SGKTTL LH I EAQKLGG A++D E+A DPS A+ +GID +NL+I+QPD+ E
Sbjct: 77 FGQESSGKTTLTLHAIAEAQKLGGSAAFIDAEHAFDPSYAKKIGIDVDNLIISQPDNGEQ 136
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VD L +SG++D+IVVDSVAAL PK EI + +R+M+QALRKI S+ +
Sbjct: 137 ALEIVDGLVRSGAVDIIVVDSVAALTPKTEIDGEMGDSKMGVHARLMSQALRKITGSISK 196
Query: 246 SHTLIIFLNQVK 257
++ +++F+NQ++
Sbjct: 197 ANCVVMFINQLR 208
>gi|421617858|ref|ZP_16058840.1| recombinase A [Pseudomonas stutzeri KOS6]
gi|409780103|gb|EKN59746.1| recombinase A [Pseudomonas stutzeri KOS6]
Length = 347
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|345099540|gb|AEN69100.1| recombinase A protein, partial [Rhizobium mesoamericanum CCGE 501]
Length = 185
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 131/185 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTLI 250
S+T++
Sbjct: 181 SNTMV 185
>gi|237749552|ref|ZP_04580032.1| recA [Oxalobacter formigenes OXCC13]
gi|229380914|gb|EEO31005.1| recA [Oxalobacter formigenes OXCC13]
Length = 353
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 143/206 (69%), Gaps = 2/206 (0%)
Query: 53 FDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLAL 112
DD + +A +K+ AL AL+Q+ FGK S++ + P +STGSL LD+AL
Sbjct: 1 MDD--NKNASNQEKNKALSAALAQIEKQFGKGSVMRMAPGVVVEEIPSVSTGSLGLDIAL 58
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
G+GGLP+GR++EIYG E+SGKTTL L VI E QKLGG CA++D E+ALD A+ +G+
Sbjct: 59 GVGGLPRGRVIEIYGPESSGKTTLTLQVIAEMQKLGGTCAFIDAEHALDVGYAQKLGVHL 118
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
++LLI+QPD+ E L + D L +SG +D+IV+DSVAAL PK EI + Q+R+M
Sbjct: 119 QDLLISQPDTGEQALEITDALVRSGGVDLIVIDSVAALTPKAEIEGDMGDSLPGLQARLM 178
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+QALRK+ S+ +++T +IF+NQ+++
Sbjct: 179 SQALRKLTGSINKTNTSVIFINQIRM 204
>gi|358458882|ref|ZP_09169087.1| Protein recA [Frankia sp. CN3]
gi|357077844|gb|EHI87298.1| Protein recA [Frankia sp. CN3]
Length = 345
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
+D AL AL+Q+ FGK S++ R R P VI TGS+ LD+ALGIGGLP+GRI+
Sbjct: 6 RDKALDNALAQIDKQFGKGSVM---RLGDETRMPIQVIPTGSIALDVALGIGGLPRGRII 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQ GG A++D E+ALDP A +G+D +NLL++QPD+
Sbjct: 63 EIYGPESSGKTTVALHAVASAQAAGGIAAFIDAEHALDPDYASKLGVDTDNLLVSQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ +L
Sbjct: 123 EQALEIADLLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGAL 182
Query: 244 CQSHTLIIFLNQVK 257
SHT IF+NQ++
Sbjct: 183 SNSHTTAIFINQLR 196
>gi|452752974|ref|ZP_21952713.1| RecA protein [alpha proteobacterium JLT2015]
gi|451959796|gb|EMD82213.1| RecA protein [alpha proteobacterium JLT2015]
Length = 347
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 138/195 (70%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S + L + + ISTGS+ LDLALG+GG P+GRI+
Sbjct: 12 MDKQKALDAALAQIDRAFGKGSAMKLGQQE-KQEIEAISTGSIGLDLALGVGGFPRGRII 70
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G+D + L+++QPD+
Sbjct: 71 EIYGPESSGKTTLALHAIAEAQKTGGTAAFVDAEHALDPIYAKKLGVDIDELIVSQPDTG 130
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +S ++DV+VVDSVAAL P+ EI + + Q+R+M+QALRK+ S+
Sbjct: 131 EQALEITDTLVRSNAVDVLVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALRKLTGSI 190
Query: 244 CQSHTLIIFLNQVKV 258
+S T +IF+NQV++
Sbjct: 191 NRSRTTVIFINQVRM 205
>gi|431927972|ref|YP_007241006.1| protein RecA [Pseudomonas stutzeri RCH2]
gi|431826259|gb|AGA87376.1| protein RecA [Pseudomonas stutzeri RCH2]
Length = 347
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|269121570|ref|YP_003309747.1| recA protein [Sebaldella termitidis ATCC 33386]
gi|268615448|gb|ACZ09816.1| recA protein [Sebaldella termitidis ATCC 33386]
Length = 375
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 149/211 (70%), Gaps = 15/211 (7%)
Query: 49 EVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSL 106
E P+ +D K+ + LA+ Q+ ++G+ S++ L +++ + ISTGSL
Sbjct: 7 EAPQLND----------KEKIIDLAMKQIQKEYGEGSIMKLGE---NQKMNIKSISTGSL 53
Query: 107 KLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAE 166
LD+ALG+GG+P+GRI+EIYG E+SGKTTLA+H+I EAQKLGG ++D E+ALDP A+
Sbjct: 54 NLDIALGVGGVPRGRIIEIYGAESSGKTTLAIHIIAEAQKLGGVAGFIDAEHALDPVYAK 113
Query: 167 AMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSD 226
A+G++ + LLI+QPD+ E L + D L +SG++DVIV+DSVAAL+PK EI +
Sbjct: 114 ALGVNIDELLISQPDTGEQALEIADMLVRSGALDVIVIDSVAALVPKAEIEGEMGDQQMG 173
Query: 227 AQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
Q+R+M++ALRK+ S+ +S T++IF+NQ++
Sbjct: 174 LQARLMSKALRKLTGSISKSSTVMIFINQIR 204
>gi|392420687|ref|YP_006457291.1| recombinase A [Pseudomonas stutzeri CCUG 29243]
gi|390982875|gb|AFM32868.1| recombinase A [Pseudomonas stutzeri CCUG 29243]
Length = 347
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|269925195|ref|YP_003321818.1| recA protein [Thermobaculum terrenum ATCC BAA-798]
gi|269788855|gb|ACZ40996.1| recA protein [Thermobaculum terrenum ATCC BAA-798]
Length = 344
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+D AL A++Q+ FG S++ + + I TGS+ LD+ALG+GG+P+GRIVEI
Sbjct: 4 RDKALESAIAQIERAFGTGSIMRMTGDRAKMQIEAIPTGSIALDIALGVGGVPRGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLA H+I EAQKLGG AY+D E+A DPS AE G+ +LLI+QPD+ E
Sbjct: 64 YGPESSGKTTLAQHIIAEAQKLGGTAAYIDAEHAFDPSYAEKCGVQLSDLLISQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SG++DV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEIAETLVRSGAVDVVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLAGAVNK 183
Query: 246 SHTLIIFLNQVKV 258
S T++IF+NQ+++
Sbjct: 184 SKTVLIFINQIRM 196
>gi|84686865|ref|ZP_01014749.1| recombinase A [Maritimibacter alkaliphilus HTCC2654]
gi|84665062|gb|EAQ11542.1| recombinase A [Rhodobacterales bacterium HTCC2654]
Length = 361
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 138/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL+Q+ FGK S++ L STGSL LD+ALGIGGLPKGRI+E
Sbjct: 19 EKQKALDSALAQIERQFGKGSIMKLGADNPVAEIASTSTGSLGLDIALGIGGLPKGRIIE 78
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LH + E QK GG CA++D E+ALDP A+ +G+D + LLI+QPD+ E
Sbjct: 79 IYGPESSGKTTLTLHCVAEEQKKGGVCAFVDAEHALDPQYAKRLGVDLDELLISQPDTGE 138
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VDTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK+ S+
Sbjct: 139 QALEIVDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRKLTGSIA 198
Query: 245 QSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 199 RSNCMVIFINQIRM 212
>gi|84517389|ref|ZP_01004742.1| recombinase A [Loktanella vestfoldensis SKA53]
gi|84508753|gb|EAQ05217.1| recombinase A [Loktanella vestfoldensis SKA53]
Length = 359
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 141/202 (69%), Gaps = 6/202 (2%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIGG 116
D K K+ AL AL+Q+ FGK S++ L G + P I STGSL LD+ALGIGG
Sbjct: 11 DKKTADKEKALESALAQIERQFGKGSIMKLG---GQNQMPEIEATSTGSLGLDIALGIGG 67
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGR++EIYG E+SGKTTL LH I E QK GG CA++D E+ALDP A+ +G++ + LL
Sbjct: 68 LPKGRVIEIYGPESSGKTTLTLHSIAEEQKKGGICAFVDAEHALDPQYAKKLGVNLDELL 127
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
I+QPD+ E L +VDTL +SG++ ++VVDSVAAL PK E+ + +R+M+QA+
Sbjct: 128 ISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAM 187
Query: 237 RKIHYSLCQSHTLIIFLNQVKV 258
RK+ S+ +S ++IF+NQ+++
Sbjct: 188 RKLTGSINRSGCMVIFINQIRM 209
>gi|359730843|gb|AEV55424.1| recombinase A [Bradyrhizobium sp. ORS 3257]
gi|359730845|gb|AEV55425.1| recombinase A [Bradyrhizobium sp. ORS 3258]
Length = 187
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 3 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 62
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 63 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 122
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 123 EQALEICDTLVRSGAVDVMVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 182
Query: 244 CQSHT 248
+S+T
Sbjct: 183 NKSNT 187
>gi|114797171|ref|YP_761421.1| recA protein [Hyphomonas neptunium ATCC 15444]
gi|114737345|gb|ABI75470.1| recA protein [Hyphomonas neptunium ATCC 15444]
Length = 356
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 140/198 (70%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K AL AL + FGK S++ L G ++ +STGSL LD+ALGIGGLPKG
Sbjct: 7 VDKQKALETALGNIERSFGKGSVMRL----GDKKTLDIEAVSTGSLGLDIALGIGGLPKG 62
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EI+G E+SGKTTL+LH + EAQK GG CA++D E+ALDP A +G+D ++LLI+QP
Sbjct: 63 RIIEIFGPESSGKTTLSLHCVAEAQKNGGVCAFIDAEHALDPVYASKLGVDLDDLLISQP 122
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG++D++V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 123 DTGEQALEIADTLVRSGAVDLVVIDSVAALTPRAEIEGEMGDQLPGLQARLMSQALRKLT 182
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 183 GSISKSKCMVIFINQIRM 200
>gi|81294640|emb|CAI71761.1| recombinase A [Bradyrhizobium sp. BDV5325]
gi|146740927|emb|CAJ44524.1| recombinase A [Bradyrhizobium sp. C8]
gi|146740929|emb|CAJ44525.1| recombinase A [Bradyrhizobium sp. CH2310]
gi|146740931|emb|CAJ44526.1| recombinase A [Bradyrhizobium sp. CH2318]
gi|146740935|emb|CAJ44528.1| recombinase A [Bradyrhizobium sp. CH2443]
gi|146741017|emb|CAJ44531.1| recombinase A [Bradyrhizobium sp. CH2506]
gi|146741021|emb|CAJ44533.1| recombinase A [Bradyrhizobium sp. CH2510]
gi|146741023|emb|CAJ44534.1| recombinase A [Bradyrhizobium sp. FTA6]
gi|146741027|emb|CAJ44536.1| recombinase A [Bradyrhizobium sp. Lcamp1]
gi|146741035|emb|CAJ44617.1| recombinase A [Bradyrhizobium japonicum USDA 6]
gi|161784374|emb|CAJ44538.1| recombinase A [Bradyrhizobium sp. RLA08]
gi|338930761|emb|CBX55448.1| recombinase A [Bradyrhizobium japonicum]
gi|338930763|emb|CBX55449.1| recombinase A [Bradyrhizobium japonicum]
gi|338930765|emb|CBX55450.1| recombinase A [Bradyrhizobium japonicum]
gi|338930783|emb|CBX55459.1| recombinase A [Bradyrhizobium japonicum]
gi|338930787|emb|CBX55461.1| recombinase A [Bradyrhizobium japonicum]
gi|338930793|emb|CBX55464.1| recombinase A [Bradyrhizobium japonicum]
gi|338930799|emb|CBX55467.1| recombinase A [Bradyrhizobium japonicum]
gi|338930801|emb|CBX55468.1| recombinase A [Bradyrhizobium japonicum]
gi|338930803|emb|CBX55469.1| recombinase A [Bradyrhizobium japonicum]
gi|338930805|emb|CBX55470.1| recombinase A [Bradyrhizobium japonicum]
gi|338930807|emb|CBX55471.1| recombinase A [Bradyrhizobium japonicum]
gi|338930809|emb|CBX55472.1| recombinase A [Bradyrhizobium japonicum]
gi|338930821|emb|CBX55478.1| recombinase A [Bradyrhizobium japonicum]
gi|338930831|emb|CBX55483.1| recombinase A [Bradyrhizobium japonicum]
gi|338930833|emb|CBX55484.1| recombinase A [Bradyrhizobium japonicum]
gi|338930839|emb|CBX55487.1| recombinase A [Bradyrhizobium japonicum]
gi|338930841|emb|CBX55488.1| recombinase A [Bradyrhizobium japonicum]
gi|338930843|emb|CBX55489.1| recombinase A [Bradyrhizobium japonicum]
gi|397172933|emb|CCC58512.1| recombinase A, partial [Bradyrhizobium sp. WSM3978]
gi|397172935|emb|CCC58513.1| recombinase A, partial [Bradyrhizobium sp. WSM3979]
gi|397172949|emb|CCC58520.1| recombinase A, partial [Bradyrhizobium sp. WSM3986]
gi|397172953|emb|CCC58522.1| recombinase A, partial [Bradyrhizobium sp. WSM3988]
gi|397172955|emb|CCC58523.1| recombinase A, partial [Bradyrhizobium sp. WSM3989]
gi|397172967|emb|CCC58529.1| recombinase A, partial [Bradyrhizobium sp. WSM3995]
gi|397172971|emb|CCC58531.1| recombinase A, partial [Bradyrhizobium sp. WSM3997]
Length = 186
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|81294646|emb|CAI71764.1| recombinase A [Bradyrhizobium sp. WSM1743]
gi|146741019|emb|CAJ44532.1| recombinase A [Bradyrhizobium sp. CH2509]
gi|146741039|emb|CAJ44619.1| recombinase A [Bradyrhizobium yuanmingense]
gi|397172869|emb|CCC58480.1| recombinase A, partial [Bradyrhizobium sp. ARR434]
gi|397172897|emb|CCC58494.1| recombinase A, partial [Bradyrhizobium sp. ARR688]
gi|397172913|emb|CCC58502.1| recombinase A, partial [Bradyrhizobium sp. ARR858]
gi|397172915|emb|CCC58503.1| recombinase A, partial [Bradyrhizobium sp. ARR859]
gi|397172947|emb|CCC58519.1| recombinase A, partial [Bradyrhizobium sp. WSM3985]
Length = 186
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|195542190|gb|ACF98305.1| RecA [Rhizobium yanglingense]
Length = 165
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
ISTGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+AL
Sbjct: 6 ISTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHAL 65
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI +
Sbjct: 66 DPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEM 125
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 126 GDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 163
>gi|212715625|ref|ZP_03323753.1| hypothetical protein BIFCAT_00524 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660992|gb|EEB21567.1| hypothetical protein BIFCAT_00524 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 394
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 136/192 (70%), Gaps = 7/192 (3%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 26 ALDTALAQVEKSFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 81
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 82 YGPESSGKTTLALHVVANAQKSGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 141
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 142 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 201
Query: 246 SHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 202 AGTTAIFINQLR 213
>gi|149688786|gb|ABR27804.1| RecA [Candidatus Pelagibacter ubique]
gi|149688788|gb|ABR27805.1| RecA [Candidatus Pelagibacter ubique]
gi|149688792|gb|ABR27807.1| RecA [Candidatus Pelagibacter ubique]
gi|149688796|gb|ABR27809.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR ISTGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+++
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM 175
>gi|385233454|ref|YP_005794796.1| recombinase A [Ketogulonicigenium vulgare WSH-001]
gi|343462365|gb|AEM40800.1| recombinase A [Ketogulonicigenium vulgare WSH-001]
Length = 362
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 142/202 (70%), Gaps = 6/202 (2%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI---STGSLKLDLALGIGG 116
D K K AL AL+Q+ FGK +++ R G+ P I STGSL LD+ALGIGG
Sbjct: 11 DKKASDKQKALDSALAQIERQFGKGAIM---RLGGANALPEIEATSTGSLGLDIALGIGG 67
Query: 117 LPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLL 176
LPKGRI+EI+G E+SGKTTL LH + E QK GG CA++D E+ALDPS A+ +G++ + LL
Sbjct: 68 LPKGRIIEIFGPESSGKTTLTLHAVAEEQKKGGVCAFVDAEHALDPSYAKKLGVNLDELL 127
Query: 177 IAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQAL 236
I+QPD+ E L +VDTL +SG++ ++VVDSVAAL PK EI + +R+M+QA+
Sbjct: 128 ISQPDTGEQALEIVDTLVRSGAVSMVVVDSVAALTPKSEIEGDMGDSSVGVHARLMSQAM 187
Query: 237 RKIHYSLCQSHTLIIFLNQVKV 258
RK+ S+ +S+ ++IF+NQ+++
Sbjct: 188 RKLTGSISRSNCMVIFINQIRM 209
>gi|357588844|ref|ZP_09127510.1| recombinase A [Corynebacterium nuruki S6-4]
Length = 384
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 140/194 (72%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP--VISTGSLKLDLALGIGGLPKGRIV 123
+ AL LA++Q+ DFGK +++ R R P VIS+G++ +++ALGIGG P+GR+V
Sbjct: 15 RQKALDLAMAQIEKDFGKGAVM---RLGDDDRPPMRVISSGNIAINVALGIGGFPRGRVV 71
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + EAQK GG A++D E+ALDP A+ +G+D +NLL++QPD+
Sbjct: 72 EIYGPESSGKTTVALHAVAEAQKGGGIAAFIDAEHALDPEYAKKLGVDTDNLLVSQPDTG 131
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRK+ +L
Sbjct: 132 EQALEIADMLVRSGAVDIIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKMTGAL 191
Query: 244 CQSHTLIIFLNQVK 257
Q+ T IF+NQ++
Sbjct: 192 SQTGTTAIFINQLR 205
>gi|339493489|ref|YP_004713782.1| recombinase A [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338800861|gb|AEJ04693.1| recombinase A [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 348
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|149688800|gb|ABR27811.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR ISTGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+++
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM 175
>gi|373454706|ref|ZP_09546570.1| protein recA [Dialister succinatiphilus YIT 11850]
gi|371935569|gb|EHO63314.1| protein recA [Dialister succinatiphilus YIT 11850]
Length = 352
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 139/193 (72%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL A+ Q+ +FG S++ L VI TGSL LD+A+G+GG P+GR++E
Sbjct: 10 EKKKALESAMHQITKEFGAGSIMRLGDMGDKLDIDVIPTGSLALDIAVGVGGYPRGRVIE 69
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALH I EAQKLGG A++D E+ALDP A +G+D ++LLI+QPDS E
Sbjct: 70 IYGPESSGKTTLALHAIAEAQKLGGVAAFIDAEHALDPMYAHHLGVDTKDLLISQPDSGE 129
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
LS+ ++L +SG++D++V+DSVAAL+PK EI I+ Q+R+M++ALRK+ +
Sbjct: 130 QALSICESLVRSGAVDIVVIDSVAALVPKQEIEGDISDQSVGLQARLMSKALRKLTGIIS 189
Query: 245 QSHTLIIFLNQVK 257
+S T++IF+NQ++
Sbjct: 190 KSRTIVIFINQIR 202
>gi|386020153|ref|YP_005938177.1| recombinase A [Pseudomonas stutzeri DSM 4166]
gi|327480125|gb|AEA83435.1| recombinase A [Pseudomonas stutzeri DSM 4166]
Length = 348
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|416157769|ref|ZP_11605292.1| recombinase A [Moraxella catarrhalis 101P30B1]
gi|416224493|ref|ZP_11626556.1| recombinase A [Moraxella catarrhalis 103P14B1]
gi|416235610|ref|ZP_11630241.1| recombinase A [Moraxella catarrhalis 12P80B1]
gi|416253822|ref|ZP_11638423.1| recombinase A [Moraxella catarrhalis O35E]
gi|326562574|gb|EGE12887.1| recombinase A [Moraxella catarrhalis 103P14B1]
gi|326564101|gb|EGE14341.1| recombinase A [Moraxella catarrhalis 12P80B1]
gi|326573518|gb|EGE23481.1| recombinase A [Moraxella catarrhalis 101P30B1]
gi|326577768|gb|EGE27641.1| recombinase A [Moraxella catarrhalis O35E]
Length = 349
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL+ AL+Q+ FGK +++ L V+STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTL L I E QK GG CA++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 65 FGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 125 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 184
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 185 SNCMVIFINQIRM 197
>gi|148897709|emb|CAM18508.1| recombinase A [Ochrobactrum gallinifaecis]
Length = 238
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 123/158 (77%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 5 VPTGSLSLDIALGIGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 64
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 65 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 124
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 125 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM 162
>gi|115498183|gb|ABI98671.1| RecA [Sinorhizobium sp. CCBAU 53044]
Length = 183
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 130/178 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L +STGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLAL
Sbjct: 1 FGKGSVMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLALQT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+ID
Sbjct: 61 IAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAID 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 121 ILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 178
>gi|418295685|ref|ZP_12907535.1| recombinase A [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|50250475|emb|CAH03857.1| RecA protein [Pseudomonas stutzeri]
gi|379067018|gb|EHY79761.1| recombinase A [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 347
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDTHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|336321147|ref|YP_004601115.1| recA protein [[Cellvibrio] gilvus ATCC 13127]
gi|336104728|gb|AEI12547.1| recA protein [[Cellvibrio] gilvus ATCC 13127]
Length = 346
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL ALSQ+ FGK S++ R R PV I TGS+ LD+ALGIGGLP+GRI+
Sbjct: 7 REKALEAALSQIDRQFGKGSIM---RLGDEGRAPVEVIPTGSIALDVALGIGGLPRGRII 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQ+ GG A++D E+ALDP A+ +G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L ++D L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 124 EQALEIMDMLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 183
Query: 244 CQSHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 184 NSSGTTAIFINQLR 197
>gi|70728613|ref|YP_258362.1| recombinase A [Pseudomonas protegens Pf-5]
gi|76363337|sp|Q4KHC1.1|RECA_PSEF5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|68342912|gb|AAY90518.1| RecA protein [Pseudomonas protegens Pf-5]
Length = 350
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|406708467|ref|YP_006758819.1| recombinase A [alpha proteobacterium HIMB59]
gi|406654243|gb|AFS49642.1| RecA protein [alpha proteobacterium HIMB59]
Length = 353
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 68 NALRLALSQLANDFGKESMLSL-KRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIY 126
N L+ +S + +GK S++ L K+ V STGSL LD+ALGIGGLPKGR+VE+Y
Sbjct: 8 NKLKTVISSIEKSYGKGSIMMLGKKDEDMGNVDVYSTGSLGLDIALGIGGLPKGRVVEVY 67
Query: 127 GREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENL 186
G E+SGKTTL LHVI EAQK+GG CA++D E+ALDP A+ +G++ + LLI+QPD+ E
Sbjct: 68 GPESSGKTTLTLHVIAEAQKMGGTCAFIDAEHALDPGYAKKLGVNIDELLISQPDTGEQA 127
Query: 187 LSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQS 246
L + DTL KS ID++V+DSVAAL+P+ E+ + Q+R+M+QALRK+ S+ ++
Sbjct: 128 LEIADTLVKSEGIDLLVIDSVAALVPRAELEGEMGDSLPGLQARLMSQALRKLTSSISKT 187
Query: 247 HTLIIFLNQVKV 258
+T+++F+NQ+++
Sbjct: 188 NTMVVFINQLRM 199
>gi|419955573|ref|ZP_14471699.1| recombinase A [Pseudomonas stutzeri TS44]
gi|387967614|gb|EIK51913.1| recombinase A [Pseudomonas stutzeri TS44]
Length = 352
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|315499501|ref|YP_004088304.1| reca protein [Asticcacaulis excentricus CB 48]
gi|315417513|gb|ADU14153.1| recA protein [Asticcacaulis excentricus CB 48]
Length = 356
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 137/194 (70%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL AL+Q+ FGK S++ L ISTGSL LD+ALGIGGLPKGR++E
Sbjct: 15 EKQRALESALAQIDRAFGKGSVMKLGNAGKVVEVESISTGSLGLDMALGIGGLPKGRVIE 74
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTLALH + E QK GG A++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 75 IYGPESSGKTTLALHTVAEIQKAGGTAAFVDAEHALDPVYAHKLGVNLDDLLVSQPDNGE 134
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + DTL +SG++D++VVDSVAAL PK EI + Q+R+M+QALRK+ S+
Sbjct: 135 QALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQALRKLTASIS 194
Query: 245 QSHTLIIFLNQVKV 258
+S ++IF+NQ+++
Sbjct: 195 KSKCIVIFINQIRM 208
>gi|296112538|ref|YP_003626476.1| recombination protein RecA [Moraxella catarrhalis RH4]
gi|416216870|ref|ZP_11623904.1| recombinase A [Moraxella catarrhalis 7169]
gi|416229548|ref|ZP_11628086.1| recombinase A [Moraxella catarrhalis 46P47B1]
gi|416240237|ref|ZP_11632301.1| recombinase A [Moraxella catarrhalis BC1]
gi|416242132|ref|ZP_11633266.1| recombinase A [Moraxella catarrhalis BC7]
gi|416247761|ref|ZP_11635908.1| recombinase A [Moraxella catarrhalis BC8]
gi|416249097|ref|ZP_11636375.1| recombinase A [Moraxella catarrhalis CO72]
gi|421779352|ref|ZP_16215845.1| recombination protein RecA [Moraxella catarrhalis RH4]
gi|295920232|gb|ADG60583.1| recombination protein RecA [Moraxella catarrhalis BBH18]
gi|326561307|gb|EGE11665.1| recombinase A [Moraxella catarrhalis 7169]
gi|326562548|gb|EGE12863.1| recombinase A [Moraxella catarrhalis 46P47B1]
gi|326566176|gb|EGE16330.1| recombinase A [Moraxella catarrhalis BC1]
gi|326569092|gb|EGE19155.1| recombinase A [Moraxella catarrhalis BC8]
gi|326571693|gb|EGE21708.1| recombinase A [Moraxella catarrhalis BC7]
gi|326576322|gb|EGE26232.1| recombinase A [Moraxella catarrhalis CO72]
gi|407813492|gb|EKF84273.1| recombination protein RecA [Moraxella catarrhalis RH4]
Length = 349
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL+ AL+Q+ FGK +++ L V+STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTL L I E QK GG CA++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 65 FGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 125 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 184
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 185 SNCMVIFINQIRM 197
>gi|409393634|ref|ZP_11244934.1| recombinase A [Pseudomonas sp. Chol1]
gi|409393772|ref|ZP_11245059.1| recombinase A [Pseudomonas sp. Chol1]
gi|409121703|gb|EKM97768.1| recombinase A [Pseudomonas sp. Chol1]
gi|409121776|gb|EKM97838.1| recombinase A [Pseudomonas sp. Chol1]
Length = 352
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|168207517|ref|ZP_02633522.1| recA protein [Clostridium perfringens E str. JGS1987]
gi|169342683|ref|ZP_02863724.1| recA protein [Clostridium perfringens C str. JGS1495]
gi|169299189|gb|EDS81259.1| recA protein [Clostridium perfringens C str. JGS1495]
gi|170661136|gb|EDT13819.1| recA protein [Clostridium perfringens E str. JGS1987]
Length = 352
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 142/189 (75%), Gaps = 1/189 (0%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
A+ +A+ Q+ FGK S++ L GS + +STG L LD+ALGIGG+PKGRI+EIYG
Sbjct: 11 AIEMAMGQIEKQFGKGSVMKLGEQ-GSPQMDAVSTGCLDLDIALGIGGVPKGRIIEIYGP 69
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALHV+ EAQKLGG AY+D E+ALDP A+ +G++ ++L+++QPD+ E L
Sbjct: 70 ESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQALE 129
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG+IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +S+
Sbjct: 130 ITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINKSNC 189
Query: 249 LIIFLNQVK 257
++IF+NQ++
Sbjct: 190 VVIFINQLR 198
>gi|149688790|gb|ABR27806.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR ISTGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+++
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM 175
>gi|85374373|ref|YP_458435.1| recombinase A [Erythrobacter litoralis HTCC2594]
gi|84787456|gb|ABC63638.1| recombinase A [Erythrobacter litoralis HTCC2594]
Length = 352
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 147/206 (71%), Gaps = 13/206 (6%)
Query: 62 KIMQKDN------ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLAL 112
K+++K+N AL AL+Q+ FGK S + L GS+ ISTGSL LD+AL
Sbjct: 6 KLVEKENNVDRQKALDAALAQIDRAFGKGSAMKL----GSKEAMNVEAISTGSLGLDIAL 61
Query: 113 GIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDA 172
GIGGLPKGR++E+YG E+SGKTTLALH I EAQK GG A++D E+ALDP A+A+G+D
Sbjct: 62 GIGGLPKGRVIEVYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKALGVDI 121
Query: 173 ENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIM 232
+ L+++QPD+ E L + DTL +S ++D++VVDSVAAL+P+ EI + + Q+R+M
Sbjct: 122 DELIVSQPDTGEQALEITDTLVRSNAVDILVVDSVAALVPRAEIEGEMGDSHVGLQARLM 181
Query: 233 TQALRKIHYSLCQSHTLIIFLNQVKV 258
+Q+LRK+ S+ +S ++IF+NQ+++
Sbjct: 182 SQSLRKLTGSINRSKCMVIFINQLRM 207
>gi|403054210|ref|ZP_10908694.1| recombinase A [Acinetobacter bereziniae LMG 1003]
gi|445426086|ref|ZP_21437512.1| RecA protein [Acinetobacter sp. WC-743]
gi|444753039|gb|ELW77708.1| RecA protein [Acinetobacter sp. WC-743]
Length = 347
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|325651217|emb|CBY89430.1| RecA protein [Rhizobium cellulosilyticum]
Length = 183
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENIVEIETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|298103538|emb|CBH19580.1| recombinase A [Mesorhizobium sp. GAC138P]
Length = 187
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 130/177 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L + TGSL LD+ALG+GGLP+GRI+EIYG E+SGKTTLALH
Sbjct: 11 FGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEIYGPESSGKTTLALHT 70
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+ID
Sbjct: 71 VAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAID 130
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ++
Sbjct: 131 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIR 187
>gi|295696220|ref|YP_003589458.1| recA protein [Kyrpidia tusciae DSM 2912]
gi|295411822|gb|ADG06314.1| recA protein [Kyrpidia tusciae DSM 2912]
Length = 351
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 136/189 (71%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL +AL Q+ FGK S++ L S V+STG+L LD+ALG+GG P+GR++EIYG
Sbjct: 7 ALDMALRQIEKQFGKGSIMKLGEAQASMNVEVVSTGALALDIALGVGGFPRGRVIEIYGP 66
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I E QKLGG A++D E+ALDP A +G++ + LLI+QPD+ E L
Sbjct: 67 ESSGKTTVALHAIAEVQKLGGQAAFIDAEHALDPVYARNLGVNIDELLISQPDTGEQALE 126
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG++D+IV+DSVAAL+PK E+ + + Q+R+M+QALRK+ ++ +S T
Sbjct: 127 IAEALVRSGAVDIIVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKLSGAISKSRT 186
Query: 249 LIIFLNQVK 257
+ IF+NQ++
Sbjct: 187 IAIFINQIR 195
>gi|229817437|ref|ZP_04447719.1| hypothetical protein BIFANG_02699 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785226|gb|EEP21340.1| hypothetical protein BIFANG_02699 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 395
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 136/192 (70%), Gaps = 7/192 (3%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVE+
Sbjct: 21 ALDTALAQVEKSFGKGSAMRL----GDRPEQNVEVIPTGSLALDMALGIGGLPKGRIVEV 76
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 77 YGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 136
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 137 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKMTGALAQ 196
Query: 246 SHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 197 AGTTAIFINQLR 208
>gi|25005286|emb|CAD44251.1| RecA protein [Ensifer adhaerens]
Length = 183
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 129/182 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGGKDSIIEIETVSTGSLSLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 180
Query: 246 SH 247
S+
Sbjct: 181 SN 182
>gi|146328886|ref|YP_001209208.1| DNA recombination protein RecA [Dichelobacter nodosus VCS1703A]
gi|166220643|sp|A5EW90.1|RECA_DICNV RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|146232356|gb|ABQ13334.1| DNA recombination protein RecA [Dichelobacter nodosus VCS1703A]
Length = 350
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 137/194 (70%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL L+QL FGK +++ L + ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 4 EQKKALTAVLTQLDKQFGKGTVMRLGEQVAAHDIQAISTGSLTLDIALGIGGLPKGRIVE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ LHVI EAQK GG A++D E+ALDP A +G++ ++L + QPD+ E
Sbjct: 64 IYGPESSGKTTMMLHVIAEAQKNGGTAAFIDAEHALDPIYARKLGVNTDDLYVTQPDTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ DVIVVDSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 124 QALEICDALVRSGAFDVIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIK 183
Query: 245 QSHTLIIFLNQVKV 258
+++TL++F+NQ+++
Sbjct: 184 RANTLVVFINQIRM 197
>gi|71361898|gb|AAZ30056.1| recombinant protein A [Moraxella catarrhalis O35E]
Length = 349
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 139/193 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL+ AL+Q+ FGK +++ L V+STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KEKALKAALAQIEKQFGKNTIMHLGDETAKLDVDVVSTGSLGLDIALGIGGLPKGRIIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTL L I E QK GG CA++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 65 FGPESSGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYAKKLGVNIDDLLVSQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 125 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 184
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 185 SNCMVIFINQIRM 197
>gi|229577464|ref|YP_001172035.2| recombinase A [Pseudomonas stutzeri A1501]
Length = 348
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|126729802|ref|ZP_01745615.1| recombinase A [Sagittula stellata E-37]
gi|126709921|gb|EBA08974.1| recombinase A [Sagittula stellata E-37]
Length = 349
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 137/200 (68%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D + K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 2 DSKRNADKQKALDSALAQIERQFGKGSIMKLGGENAIKDIEATSTGSLGLDIALGIGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 62 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLIS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG++ ++VVDSVAAL PK E+ + +R+M+QA+RK
Sbjct: 122 QPDTGEQALEITDTLVRSGAVSLVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRK 181
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 182 LTASISRSNCMVIFINQIRM 201
>gi|25005282|emb|CAD44249.1| RecA protein [Ensifer adhaerens]
gi|25005284|emb|CAD44250.1| RecA protein [Ensifer adhaerens]
Length = 183
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 129/182 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGGKDSIIEIETVSTGSLSLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 180
Query: 246 SH 247
S+
Sbjct: 181 SN 182
>gi|114330801|ref|YP_747023.1| recombinase A [Nitrosomonas eutropha C91]
gi|122314264|sp|Q0AHX4.1|RECA_NITEC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|114307815|gb|ABI59058.1| RecA protein [Nitrosomonas eutropha C91]
Length = 343
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 143/197 (72%), Gaps = 8/197 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL AL+Q+ +GK S++ L ++ V+STGSL LD+ALG+GGLP+GRI+EI
Sbjct: 5 KNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGRIIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QKLGG A++D E+ALDP A+ +G++ + LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEI----GVPINGMYSDAQSRIMTQALRKIHY 241
L + D L +SGS+D++V+DSVAAL P+ EI G P G+ Q+R+M+QALRK+
Sbjct: 125 ALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGEPQMGL----QARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
++ +++T +IF+NQ+++
Sbjct: 181 NIKRTNTTVIFINQIRM 197
>gi|375492982|emb|CCA94959.1| RecA protein, partial [Aminobacter aminovorans]
Length = 177
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 129/175 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L +STGSL LD+ALG+GGLP+GRI+EIYG E+SGKTTLALH
Sbjct: 3 FGKGSIMRLGANEQVVEIGTVSTGSLGLDIALGVGGLPRGRIIEIYGPESSGKTTLALHT 62
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+ID
Sbjct: 63 VAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAID 122
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQ 255
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ
Sbjct: 123 VLVVDSVAALTPRAEIEGEMGESLPGLQARLMSQALRKLTASISRSNTMVIFINQ 177
>gi|95928608|ref|ZP_01311355.1| recA protein [Desulfuromonas acetoxidans DSM 684]
gi|95135398|gb|EAT17050.1| recA protein [Desulfuromonas acetoxidans DSM 684]
Length = 340
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 144/198 (72%), Gaps = 3/198 (1%)
Query: 64 MQKDN---ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKG 120
M DN A+ LA+ Q+ FGK S++ L R ISTGS+ LD+ALGIGG+P+G
Sbjct: 1 MATDNRKQAIDLAMGQIEKQFGKGSIMRLGEDNVMRDISTISTGSIGLDIALGIGGVPRG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTTLALH++ EAQK GG A++D E+ALD + A +G++A++LL++QP
Sbjct: 61 RIIEVYGPESSGKTTLALHIVAEAQKKGGIAAFVDAEHALDITYARKLGVNADDLLVSQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +V+ L +SG+IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 121 DTGEQALEIVEVLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRKLT 180
Query: 241 YSLCQSHTLIIFLNQVKV 258
++ +S+ +IF+NQ+++
Sbjct: 181 ATISKSNCCVIFINQIRM 198
>gi|397172885|emb|CCC58488.1| recombinase A, partial [Bradyrhizobium sp. ARR598]
Length = 186
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGRIV
Sbjct: 2 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDIETVSSGSLGLDIALGVGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|420155536|ref|ZP_14662396.1| RecA protein [Clostridium sp. MSTE9]
gi|394759022|gb|EJF41834.1| RecA protein [Clostridium sp. MSTE9]
Length = 470
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 141/194 (72%), Gaps = 1/194 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL AL+Q+ FGK +++ L + + + ISTGS LD+ALGIGGLP+GRIV
Sbjct: 91 VDKSKALDTALAQIEKQFGKGAVMRLGQN-QAMQVEAISTGSFSLDMALGIGGLPRGRIV 149
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH I + QK GGY A++DVE+ALDP A A+G+D + LL++QPD+
Sbjct: 150 EVYGPESSGKTTLALHCIAQGQKNGGYAAFIDVEHALDPVYARALGVDVDALLVSQPDTG 209
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + + L +SG+IDVIVVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 210 EQALEITEALVRSGAIDVIVVDSVAALVPRAEIEGDMGDSHVGLQARLMSQALRKLAGAI 269
Query: 244 CQSHTLIIFLNQVK 257
+S+ + IF+NQ++
Sbjct: 270 SKSNCVAIFINQLR 283
>gi|299152209|gb|ADJ18194.1| recombinase A [Rhizobium miluonense]
Length = 183
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 123/158 (77%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+AL
Sbjct: 21 VSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHAL 80
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D +NLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 81 DPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 140
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S T++IF+NQ+++
Sbjct: 141 GDSLPGLQARLMSQALRKLTASISKSKTMVIFINQIRM 178
>gi|304316844|ref|YP_003851989.1| recA protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433654987|ref|YP_007298695.1| protein RecA [Thermoanaerobacterium thermosaccharolyticum M0795]
gi|302778346|gb|ADL68905.1| recA protein [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433293176|gb|AGB18998.1| protein RecA [Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 343
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 146/195 (74%), Gaps = 1/195 (0%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +A+SQ+ FGK S++ L VISTGS+ LD+ALG+GG+P+GRI
Sbjct: 1 MIEKQKALDMAISQIERQFGKGSIMRLGDN-SKLNVEVISTGSIDLDIALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTT+ALH++ EAQKLGG A++D E+ALDP+ A+ +G++ +NLL++QPD+
Sbjct: 60 IEIFGPESSGKTTIALHILAEAQKLGGTGAFIDAEHALDPAYAKNVGVNIDNLLVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +V+ L +SG+IDVIV+DSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEIVEALVRSGAIDVIVIDSVAALVPKAEIDGDMGDAHVGLQARLMSQALRKLSGI 179
Query: 243 LCQSHTLIIFLNQVK 257
+ ++ ++ +F+NQ++
Sbjct: 180 ISKTKSVAVFINQLR 194
>gi|404481599|gb|AFR75798.1| RecA, partial [Acetobacteraceae bacterium M1MS02]
Length = 172
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 126/158 (79%)
Query: 100 VISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENA 159
V+STGSL LD+ALGIGGLP+GRI+EIYG E+SGKTTLALH I EAQKLGG CA++D E+A
Sbjct: 15 VVSTGSLGLDIALGIGGLPRGRIIEIYGPESSGKTTLALHAIAEAQKLGGTCAFIDAEHA 74
Query: 160 LDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVP 219
LDP A +G+D +NLLI+QPD+ E L + DTL +S +IDV+V+DSVAAL+P+ E+
Sbjct: 75 LDPGYARKLGVDVDNLLISQPDAGEQALEIADTLVRSEAIDVLVIDSVAALVPRAELEGD 134
Query: 220 INGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
+ + +R+M+QALRK+ ++ +S+T++IFLNQ++
Sbjct: 135 MGDSHVGLHARLMSQALRKLTGTVSRSNTMMIFLNQIR 172
>gi|404402540|ref|ZP_10994124.1| recombinase A [Pseudomonas fuscovaginae UPB0736]
Length = 354
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 139/195 (71%), Gaps = 3/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 4 NKKKALAAALGQIERQFGKGAVMRMGDH--DRQAIPSISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|149688784|gb|ABR27803.1| RecA [Candidatus Pelagibacter ubique HTCC1002]
Length = 289
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR ISTGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESISTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+++
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM 175
>gi|148897705|emb|CAM18506.1| recombinase A [Ochrobactrum grignonense]
gi|148897707|emb|CAM18507.1| recombinase A [Ochrobactrum grignonense]
Length = 247
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 123/158 (77%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 3 VPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 62
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 63 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 122
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 123 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM 160
>gi|50084563|ref|YP_046073.1| recombinase A [Acinetobacter sp. ADP1]
gi|1172879|sp|P42438.1|RECA_ACIAD RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|440089|gb|AAC27115.1| RecA [Acinetobacter sp. ADP1]
gi|49530539|emb|CAG68251.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter sp. ADP1]
Length = 349
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|359780396|ref|ZP_09283622.1| recombinase A [Pseudomonas psychrotolerans L19]
gi|359371708|gb|EHK72273.1| recombinase A [Pseudomonas psychrotolerans L19]
Length = 347
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGTVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKQGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|158631776|gb|ABW74993.1| RecA [Mesorhizobium tarimense]
Length = 168
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 125/162 (77%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
R + TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D
Sbjct: 1 RDRTVPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDA 60
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI
Sbjct: 61 EHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEI 120
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 EGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 162
>gi|302382290|ref|YP_003818113.1| recA protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192918|gb|ADL00490.1| recA protein [Brevundimonas subvibrioides ATCC 15264]
Length = 367
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 141/192 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL A++Q+ FGK S++ L + + P +STGSL LD+ALGIGGLP+GR++E+
Sbjct: 24 KQRALEAAIAQIDRAFGKGSVMKLGKGGIADVIPSVSTGSLGLDMALGIGGLPRGRVIEV 83
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
+G E+SGKTTLALH + E QK GG A++D E+ALDP A+ +G++ ++LL++QPD+ E
Sbjct: 84 FGPESSGKTTLALHTVAEIQKSGGTAAFVDAEHALDPGYAQKLGVNLDDLLVSQPDTGEQ 143
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VDTL +SG++D++VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 144 ALEIVDTLVRSGAVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 203
Query: 246 SHTLIIFLNQVK 257
S+ +++F+NQ++
Sbjct: 204 SNCIVLFINQIR 215
>gi|407473997|ref|YP_006788397.1| recombinase A [Clostridium acidurici 9a]
gi|407050505|gb|AFS78550.1| recombinase A [Clostridium acidurici 9a]
Length = 357
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL +A+SQ+ FGK S+++L +STG+L LD+A+GIGG P+GRI+E
Sbjct: 3 EKAKALEMAISQIEKQFGKGSIMTLGEE-SKLNVEAVSTGALDLDIAIGIGGFPRGRIIE 61
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ALH I E QK+GG A++D E+ALDP A+ +G+D ENL+++QPD+ E
Sbjct: 62 IYGPESSGKTTVALHAIAEHQKIGGVAAFIDAEHALDPQYAKNLGVDIENLIVSQPDTGE 121
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++
Sbjct: 122 QALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGAIK 181
Query: 245 QSHTLIIFLNQVK 257
+S+T IF+NQ++
Sbjct: 182 RSNTTAIFINQLR 194
>gi|398347369|ref|ZP_10532072.1| recombinase A [Leptospira broomii str. 5399]
Length = 372
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 142/200 (71%), Gaps = 4/200 (2%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
DD+K M A+ A++Q+ FGK S++ L + PVI TGSL LD+ALGIGG P
Sbjct: 21 DDSKKM----AIDQAMTQIEKQFGKGSIMRLGAASATNVMPVIPTGSLDLDIALGIGGYP 76
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL L I EAQK GG A++D E+ALDPS A+ +G++ E LL++
Sbjct: 77 LGRIIEIYGPESSGKTTLTLAAIAEAQKRGGVAAFIDAEHALDPSYAKKLGVNLEELLVS 136
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + ++L +S +ID+IVVDSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 137 QPDNGEEALEICESLVRSNAIDIIVVDSVAALVPKAEIEGDMGDAHMGLQARLMSQALRK 196
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ ++ +S T+++F+NQ+++
Sbjct: 197 LTGTISKSRTVVVFINQIRM 216
>gi|281412047|ref|YP_003346126.1| recA protein [Thermotoga naphthophila RKU-10]
gi|281373150|gb|ADA66712.1| recA protein [Thermotoga naphthophila RKU-10]
Length = 356
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 139/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK + L AL ++ +FGK S++ L + VI TGSL +D+A G+GG P+GRIVE
Sbjct: 6 QKKSVLEKALKRIEENFGKGSIMILGDETQVQPVEVIPTGSLAIDIATGVGGYPRGRIVE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G+E+SGKTTLALH I EAQK+GG A++D E+ALDP A+ +G+D ++LLI+QPD E
Sbjct: 66 IFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKSLLISQPDHGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VD L +SG +D+IVVDSVAAL+P+ EI + M Q+R+M+QALRKI S+
Sbjct: 126 QALEIVDELVRSGVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVN 185
Query: 245 QSHTLIIFLNQVKV 258
+S ++IF NQ+++
Sbjct: 186 KSKAVVIFTNQIRM 199
>gi|148270072|ref|YP_001244532.1| recombinase A [Thermotoga petrophila RKU-1]
gi|166220691|sp|A5IL83.1|RECA_THEP1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|147735616|gb|ABQ46956.1| RecA protein [Thermotoga petrophila RKU-1]
Length = 356
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 139/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK + L AL ++ +FGK S++ L + VI TGSL +D+A G+GG P+GRIVE
Sbjct: 6 QKKSVLEKALKRIEENFGKGSIMILGDETQVQPVEVIPTGSLAIDIATGVGGYPRGRIVE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G+E+SGKTTLALH I EAQK+GG A++D E+ALDP A+ +G+D ++LLI+QPD E
Sbjct: 66 IFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKSLLISQPDHGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VD L +SG +D+IVVDSVAAL+P+ EI + M Q+R+M+QALRKI S+
Sbjct: 126 QALEIVDELVRSGVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVN 185
Query: 245 QSHTLIIFLNQVKV 258
+S ++IF NQ+++
Sbjct: 186 KSKAVVIFTNQIRM 199
>gi|77457402|ref|YP_346907.1| recombinase A [Pseudomonas fluorescens Pf0-1]
gi|398965158|ref|ZP_10680824.1| protein RecA [Pseudomonas sp. GM30]
gi|398976912|ref|ZP_10686722.1| protein RecA [Pseudomonas sp. GM25]
gi|424921731|ref|ZP_18345092.1| RecA [Pseudomonas fluorescens R124]
gi|123772305|sp|Q3KH38.1|RECA_PSEPF RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|77381405|gb|ABA72918.1| recombinase A [Pseudomonas fluorescens Pf0-1]
gi|379772230|gb|AFD18719.1| recombinase A [Pseudomonas fluorescens]
gi|398138795|gb|EJM27809.1| protein RecA [Pseudomonas sp. GM25]
gi|398147612|gb|EJM36316.1| protein RecA [Pseudomonas sp. GM30]
gi|404302891|gb|EJZ56853.1| RecA [Pseudomonas fluorescens R124]
Length = 352
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|380703520|gb|AFD96729.1| RecA, partial [Mesorhizobium amorphae]
Length = 184
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 24 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 83
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 84 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 143
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 144 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 181
>gi|83858788|ref|ZP_00952310.1| recombinase A [Oceanicaulis sp. HTCC2633]
gi|83853611|gb|EAP91463.1| recombinase A [Oceanicaulis sp. HTCC2633]
Length = 360
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 138/198 (69%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKG 120
M K AL AL+Q+ FGK S++ L G++ ISTGSL LD+ALG+GGLPKG
Sbjct: 14 MDKQKALEAALTQIDRAFGKGSVMKL----GAKPDQDIQAISTGSLGLDIALGVGGLPKG 69
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RIVEIYG E+SGKTTLALH + E QK GG A++D E+ALDP A +G+D LL++QP
Sbjct: 70 RIVEIYGPESSGKTTLALHTVAECQKSGGTAAFVDAEHALDPVYARKLGVDVSELLVSQP 129
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG+IDV+V+DSVAAL P+ E+ + Q+R+M+QALRK+
Sbjct: 130 DAGEQALEIADTLVRSGAIDVLVIDSVAALTPRAELEGDMGDSLPGLQARLMSQALRKLT 189
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S L+IF+NQ+++
Sbjct: 190 ASISKSKCLVIFINQIRM 207
>gi|400976499|ref|ZP_10803730.1| recombinase A [Salinibacterium sp. PAMC 21357]
Length = 386
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ +L AL+Q+ FGK S++ R R PV I TGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 REKSLETALAQIDRQFGKGSVM---RLGSDERAPVEVIPTGSIALDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A +G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTTLTLHAIANAQRNGGIAAFIDAEHALDPEYAAKLGVDIDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSID+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ L
Sbjct: 124 EQALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLTGGL 183
Query: 244 CQSHTLIIFLNQVK 257
Q++T +IF+NQ++
Sbjct: 184 SQTNTTMIFINQLR 197
>gi|380703506|gb|AFD96722.1| RecA, partial [Rhizobium yanglingense]
gi|380703510|gb|AFD96724.1| RecA, partial [Rhizobium yanglingense]
Length = 162
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 124/159 (77%)
Query: 100 VISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENA 159
ISTGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+A
Sbjct: 1 TISTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHA 60
Query: 160 LDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVP 219
LDP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI
Sbjct: 61 LDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGE 120
Query: 220 INGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 MGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 159
>gi|325650910|emb|CBY89638.1| RecA protein [Rhizobium sp. R-45860=2192]
gi|325650914|emb|CBY89640.1| RecA protein [Rhizobium sp. R-46039=B1004]
Length = 183
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGANESIVEIETVSTGSLSLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|398877414|ref|ZP_10632560.1| protein RecA [Pseudomonas sp. GM67]
gi|398884515|ref|ZP_10639448.1| protein RecA [Pseudomonas sp. GM60]
gi|398194324|gb|EJM81400.1| protein RecA [Pseudomonas sp. GM60]
gi|398202577|gb|EJM89418.1| protein RecA [Pseudomonas sp. GM67]
Length = 352
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|148887241|emb|CAM12787.1| recombinase A [Ochrobactrum pseudogrignonense]
Length = 251
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 123/158 (77%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 4 VPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 63
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 64 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 123
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 124 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM 161
>gi|392542198|ref|ZP_10289335.1| recombinase A [Pseudoalteromonas piscicida JCM 20779]
Length = 351
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 138/196 (70%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L G + ISTGSL LD+ALGIGGLP GRI
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKL----GENKALDIEAISTGSLGLDIALGIGGLPTGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L I EAQKLG CA++D E+ALDP AE +G++ + LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQAIAEAQKLGKTCAFVDAEHALDPIYAEKLGVNVDELLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D+IV+DSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTAN 180
Query: 243 LCQSHTLIIFLNQVKV 258
+ +S+TL IF+NQ+++
Sbjct: 181 IKRSNTLCIFINQIRM 196
>gi|110002989|emb|CAJ57781.1| recombinase A [Sinorhizobium saheli]
gi|110002991|emb|CAJ57782.1| recombinase A [Sinorhizobium saheli]
Length = 183
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 133/186 (71%), Gaps = 8/186 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL ALSQ+ FGK S++ L GS+ V +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKL----GSKDSVVEIETVSTGSLGLDIALGIGGLPKGR 56
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 57 IIEIYGPESSGKTTLALQTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 116
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 117 TGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDNLPGMQARLMSQALRKLTA 176
Query: 242 SLCQSH 247
S+ +S+
Sbjct: 177 SISKSN 182
>gi|398930943|ref|ZP_10664874.1| protein RecA [Pseudomonas sp. GM48]
gi|398949318|ref|ZP_10673197.1| protein RecA [Pseudomonas sp. GM33]
gi|426408038|ref|YP_007028137.1| recombinase A [Pseudomonas sp. UW4]
gi|398159377|gb|EJM47680.1| protein RecA [Pseudomonas sp. GM33]
gi|398164466|gb|EJM52602.1| protein RecA [Pseudomonas sp. GM48]
gi|426266255|gb|AFY18332.1| recombinase A [Pseudomonas sp. UW4]
Length = 352
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|110003015|emb|CAJ57794.1| recombinase A [Ensifer adhaerens]
Length = 183
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 129/182 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGGKDSIIEIETVSTGSLSLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+V+DSVAAL+P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 180
Query: 246 SH 247
S+
Sbjct: 181 SN 182
>gi|403675541|ref|ZP_10937703.1| recombinase A [Acinetobacter sp. NCTC 10304]
gi|417545549|ref|ZP_12196635.1| RecA protein [Acinetobacter baumannii OIFC032]
gi|421667199|ref|ZP_16107274.1| RecA protein [Acinetobacter baumannii OIFC087]
gi|421669367|ref|ZP_16109391.1| RecA protein [Acinetobacter baumannii OIFC099]
gi|421808262|ref|ZP_16244113.1| RecA protein [Acinetobacter baumannii OIFC035]
gi|400383437|gb|EJP42115.1| RecA protein [Acinetobacter baumannii OIFC032]
gi|410385545|gb|EKP38036.1| RecA protein [Acinetobacter baumannii OIFC087]
gi|410388759|gb|EKP41187.1| RecA protein [Acinetobacter baumannii OIFC099]
gi|410415842|gb|EKP67623.1| RecA protein [Acinetobacter baumannii OIFC035]
Length = 349
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|381157590|ref|ZP_09866824.1| protein RecA [Thiorhodovibrio sp. 970]
gi|380881453|gb|EIC23543.1| protein RecA [Thiorhodovibrio sp. 970]
Length = 360
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 137/193 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL AL Q+ FGK S++ + R V+STGSL LD+ALGIGGLP+GR++EI
Sbjct: 5 RKKALAAALGQIEKQFGKGSVMRMGDAGAIRNIEVVSTGSLSLDVALGIGGLPRGRVIEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL LH + E QK GG A++D E+ALDP AE +G++ + LL++QPD+ E
Sbjct: 65 YGPESSGKTTLTLHAVAEMQKTGGTAAFVDAEHALDPQYAEKLGVNMDELLVSQPDTGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 125 ALEITDMLVRSGAVDLVVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKR 184
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 185 SNAIVIFINQIRM 197
>gi|170676514|gb|ACB30410.1| recombinase A [Rhizobium giardinii]
Length = 167
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 125/162 (77%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
R +STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D
Sbjct: 1 RDRTVSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDA 60
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+V+DSVAAL+P+ EI
Sbjct: 61 EHALDPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVIDSVAALVPRAEI 120
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 121 EGEMGDSLPGLQARLMSQALRKLTASISKSNCMVIFINQIRM 162
>gi|389711178|ref|ZP_10186989.1| recombinase A [Acinetobacter sp. HA]
gi|388610030|gb|EIM39167.1| recombinase A [Acinetobacter sp. HA]
Length = 347
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KNKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I E QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|407946862|gb|AFU52185.1| recombinase A, partial [Bradyrhizobium sp. LmjX10]
Length = 184
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 133/178 (74%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L + S IS+GSL LD+ALG+GGLPKGR+VEIYG E+SGKTTLALH
Sbjct: 1 FGKGSVMKLGKNDRSMDVETISSGSLGLDIALGVGGLPKGRVVEIYGPESSGKTTLALHT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ E QK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DTL +SG++D
Sbjct: 61 VAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALEICDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINKSNTMVIFINQIRM 178
>gi|81294638|emb|CAI71760.1| recombinase A [Bradyrhizobium sp. BDV5057]
Length = 186
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMRLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|297523471|emb|CBH31143.1| recombination protein A [Mesorhizobium sp. LBER1]
Length = 183
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 131/181 (72%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GRI+EIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF
Sbjct: 123 LVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIF 182
Query: 253 L 253
+
Sbjct: 183 I 183
>gi|398874988|ref|ZP_10630185.1| protein RecA [Pseudomonas sp. GM74]
gi|398913777|ref|ZP_10656636.1| protein RecA [Pseudomonas sp. GM49]
gi|398179862|gb|EJM67461.1| protein RecA [Pseudomonas sp. GM49]
gi|398193651|gb|EJM80749.1| protein RecA [Pseudomonas sp. GM74]
Length = 352
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|226737763|sp|B8CJQ6.1|RECA_SHEPW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|212555699|gb|ACJ28153.1| RecA bacterial DNA recombination protein [Shewanella piezotolerans
WP3]
Length = 355
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 136/196 (69%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALNAVLGQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQK G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPVYAQKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVKV 258
L QS+TL+IF+NQ+++
Sbjct: 183 LKQSNTLLIFINQIRM 198
>gi|110349888|emb|CAL15006.1| recombinase A [Rhizobium cellulosilyticum]
gi|110349890|emb|CAL15007.1| recombinase A [Rhizobium cellulosilyticum]
Length = 183
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNDSIVEIETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|376261050|ref|YP_005147770.1| protein RecA [Clostridium sp. BNL1100]
gi|373945044|gb|AEY65965.1| protein RecA [Clostridium sp. BNL1100]
Length = 348
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 139/195 (71%), Gaps = 1/195 (0%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+++K AL +AL Q+ FGK +++ L I TGS+ LDLALG+GG+P+GRI
Sbjct: 1 MLEKKKALEMALGQIEKQFGKGAVMKLGEN-SHMNIESIPTGSMSLDLALGVGGVPRGRI 59
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEI+G E+SGKTT+ALH+I EAQK GG A++D E+ALDP A+ +G+D ENL+++QPD+
Sbjct: 60 VEIFGPESSGKTTVALHIIAEAQKAGGEAAFIDAEHALDPVYAKKLGVDIENLIVSQPDT 119
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + + L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 GEQALEITEALVRSGAIDVIVVDSVAALVPKAEIDGEMGDSHIGLQARLMSQALRKLAGV 179
Query: 243 LCQSHTLIIFLNQVK 257
+ +S T IF+NQ++
Sbjct: 180 ISKSKTTAIFINQLR 194
>gi|103487210|ref|YP_616771.1| recombinase A [Sphingopyxis alaskensis RB2256]
gi|98977287|gb|ABF53438.1| recA protein [Sphingopyxis alaskensis RB2256]
Length = 360
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 142/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
+ AL AL+Q+ FGK S++ L GS+ +STGSL LD+ALG+GGLP+GR+
Sbjct: 19 RQKALDAALAQIDRAFGKGSVMKL----GSKEAMQVEAVSTGSLGLDIALGVGGLPRGRV 74
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTLALH I EAQK+GG A++D E+ALDP A +G+D + L+++QPD+
Sbjct: 75 IEIYGPESSGKTTLALHCIAEAQKIGGTAAFVDAEHALDPVYARKLGVDIDELIVSQPDT 134
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+ S
Sbjct: 135 GEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGS 194
Query: 243 LCQSHTLIIFLNQVKV 258
+ +S ++IF+NQ+++
Sbjct: 195 ISRSRCMVIFINQLRM 210
>gi|402825157|ref|ZP_10874470.1| recombinase A [Sphingomonas sp. LH128]
gi|402261292|gb|EJU11342.1| recombinase A [Sphingomonas sp. LH128]
Length = 356
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 142/198 (71%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
M + AL AL+Q+ FGK S + L GS+ ISTGSL LD+ALG+GGLP+G
Sbjct: 17 MDRQKALEAALAQIDKAFGKGSAMKL----GSKETMQVEAISTGSLGLDIALGVGGLPRG 72
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
R++EIYG E+SGKTTLALH I EAQK GG A++D E+ALDP A+ +G++ + L+++QP
Sbjct: 73 RVIEIYGPESSGKTTLALHCIAEAQKTGGTAAFIDAEHALDPVYAKKLGVNIDELIVSQP 132
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L +VDTL +S +IDV+VVDSVAAL+P+ EI + + Q+R+M+Q+LRK+
Sbjct: 133 DTGEQALEIVDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQSLRKLT 192
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 193 GSISRSRCMVIFINQLRM 210
>gi|398893160|ref|ZP_10645978.1| protein RecA [Pseudomonas sp. GM55]
gi|398184633|gb|EJM72075.1| protein RecA [Pseudomonas sp. GM55]
Length = 352
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|422346343|ref|ZP_16427257.1| protein recA [Clostridium perfringens WAL-14572]
gi|373225888|gb|EHP48215.1| protein recA [Clostridium perfringens WAL-14572]
Length = 352
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 142/189 (75%), Gaps = 1/189 (0%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
A+ +A+ Q+ FGK S++ L G+ + +STG L LD+ALGIGG+PKGRI+EIYG
Sbjct: 11 AIEMAMGQIEKQFGKGSVMKLGEH-GAPQMDAVSTGCLDLDIALGIGGVPKGRIIEIYGP 69
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALHV+ EAQKLGG AY+D E+ALDP A+ +G++ ++L+++QPD+ E L
Sbjct: 70 ESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQALE 129
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG+IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +S+
Sbjct: 130 ITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINKSNC 189
Query: 249 LIIFLNQVK 257
++IF+NQ++
Sbjct: 190 VVIFINQLR 198
>gi|154184300|gb|ABS70974.1| RecA [Daeguia caeni]
Length = 183
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 130/182 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRI+EI
Sbjct: 1 KTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDALPGLQARLMSQALRKLTASINK 180
Query: 246 SH 247
S+
Sbjct: 181 SN 182
>gi|345547471|gb|AEO12093.1| RecA [Rhizobium sp. CNXF3]
Length = 159
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+AL
Sbjct: 1 VSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHAL 60
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI +
Sbjct: 61 DPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEM 120
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 GDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 158
>gi|299144062|ref|ZP_07037142.1| protein RecA [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518547|gb|EFI42286.1| protein RecA [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 341
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 145/197 (73%), Gaps = 7/197 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
++K AL LA+SQ+ +GK S++ L G+ I TGSL LDL+LG+GG+PKG
Sbjct: 3 IEKKKALELAISQIEKQYGKGSIMKL----GADSKLDIETIPTGSLALDLSLGVGGIPKG 58
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTTLALH++ E+QK+GG A++D E+ALDPS A+ +G+D ENL+++QP
Sbjct: 59 RIIEVYGPESSGKTTLALHILAESQKMGGIGAFIDAEHALDPSYAKNLGVDVENLIVSQP 118
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L ++++L +S ++D+++VDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 119 DTGEQALEIIESLVRSNAVDIVIVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLT 178
Query: 241 YSLCQSHTLIIFLNQVK 257
++ +S +IF+NQ++
Sbjct: 179 GAINKSKASVIFINQLR 195
>gi|195542202|gb|ACF98311.1| RecA [Rhizobium yanglingense]
Length = 169
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
ISTGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+AL
Sbjct: 8 ISTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHAL 67
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI +
Sbjct: 68 DPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEM 127
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 128 GDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 165
>gi|397172907|emb|CCC58499.1| recombinase A, partial [Bradyrhizobium sp. ARR751]
Length = 186
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|15644602|ref|NP_229655.1| recombinase A [Thermotoga maritima MSB8]
gi|418045922|ref|ZP_12684017.1| recA protein [Thermotoga maritima MSB8]
gi|548716|sp|P36203.1|RECA_THEMA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|297787594|pdb|3HR8|A Chain A, Crystal Structure Of Thermotoga Maritima Reca
gi|4982444|gb|AAD36921.1|AE001823_3 DNA repair protein [Thermotoga maritima MSB8]
gi|385170|gb|AAA27417.1| DNA repair protein [Thermotoga maritima]
gi|351676807|gb|EHA59960.1| recA protein [Thermotoga maritima MSB8]
Length = 356
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 139/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK + L AL ++ +FGK S++ L + VI TGSL +D+A G+GG P+GRIVE
Sbjct: 6 QKKSVLEKALKRIEENFGKGSIMILGDETQVQPVEVIPTGSLAIDIATGVGGYPRGRIVE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G+E+SGKTTLALH I EAQK+GG A++D E+ALDP A+ +G+D ++LLI+QPD E
Sbjct: 66 IFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKSLLISQPDHGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VD L +SG +D+IVVDSVAAL+P+ EI + M Q+R+M+QALRKI S+
Sbjct: 126 QALEIVDELVRSGVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVN 185
Query: 245 QSHTLIIFLNQVKV 258
+S ++IF NQ+++
Sbjct: 186 KSKAVVIFTNQIRM 199
>gi|81294634|emb|CAI71758.1| recombinase A [Bradyrhizobium sp. 4S16]
gi|146741015|emb|CAJ44530.1| recombinase A [Bradyrhizobium sp. CH2498]
gi|397172921|emb|CCC58506.1| recombinase A, partial [Bradyrhizobium sp. WSM2238]
gi|397172923|emb|CCC58507.1| recombinase A, partial [Bradyrhizobium sp. WSM2241]
gi|397172939|emb|CCC58515.1| recombinase A, partial [Bradyrhizobium sp. WSM3981]
gi|397172941|emb|CCC58516.1| recombinase A, partial [Bradyrhizobium sp. WSM3982]
gi|397172945|emb|CCC58518.1| recombinase A, partial [Bradyrhizobium sp. WSM3984]
gi|397172973|emb|CCC58532.1| recombinase A, partial [Bradyrhizobium sp. WSM3998]
Length = 186
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDIEAVSSGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVMVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|398984121|ref|ZP_10690430.1| protein RecA [Pseudomonas sp. GM24]
gi|399011254|ref|ZP_10713586.1| protein RecA [Pseudomonas sp. GM16]
gi|398117996|gb|EJM07736.1| protein RecA [Pseudomonas sp. GM16]
gi|398156238|gb|EJM44662.1| protein RecA [Pseudomonas sp. GM24]
Length = 351
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|390565874|ref|ZP_10246452.1| Recombinase A (recA) [Nitrolancetus hollandicus Lb]
gi|390170888|emb|CCF85791.1| Recombinase A (recA) [Nitrolancetus hollandicus Lb]
Length = 344
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 141/196 (71%)
Query: 63 IMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
+ +++ A+ LA++Q+ FG+ S++ + + I TGS+ LDLALG+GG+P+GRI
Sbjct: 1 MAEREKAIDLAIAQIERQFGRGSIMRMGEDATRLQIETIPTGSIALDLALGVGGIPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
EIYG E+SGKTTLA H+I EAQKLGG AY+D E+A DP AE G++ + LLI+QPD+
Sbjct: 61 TEIYGPESSGKTTLAQHIIAEAQKLGGVAAYVDAEHAFDPIYAERCGVNLDELLISQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + +TL +SG+IDV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEIAETLVRSGAIDVVVIDSVAALVPRAEIDGDMGDSHVGLQARLMSQALRKLTGA 180
Query: 243 LCQSHTLIIFLNQVKV 258
+ +S T +IF+NQ+++
Sbjct: 181 ISRSRTAVIFINQLRM 196
>gi|225351347|ref|ZP_03742370.1| hypothetical protein BIFPSEUDO_02941 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157691|gb|EEG70974.1| hypothetical protein BIFPSEUDO_02941 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 394
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 136/192 (70%), Gaps = 7/192 (3%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEI 125
AL AL+Q+ FGK S + L G R VI TGSL LD+ALGIGGLPKGRIVEI
Sbjct: 26 ALDTALAQVEKSFGKGSAMRL----GDRPEQDVEVIPTGSLALDMALGIGGLPKGRIVEI 81
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ AQK GG A++D E+ALDP A +G+D ++L+++QPD+ E
Sbjct: 82 YGPESSGKTTLALHVVANAQKNGGVAAFIDAEHALDPVYARKLGVDTDSLIVSQPDNGEQ 141
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRK+ +L Q
Sbjct: 142 ALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQ 201
Query: 246 SHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 202 AGTTAIFINQLR 213
>gi|169633342|ref|YP_001707078.1| recombinase A [Acinetobacter baumannii SDF]
gi|169795694|ref|YP_001713487.1| recombinase A [Acinetobacter baumannii AYE]
gi|184158405|ref|YP_001846744.1| recombinase A [Acinetobacter baumannii ACICU]
gi|213158361|ref|YP_002319659.1| recombinase A [Acinetobacter baumannii AB0057]
gi|215483180|ref|YP_002325387.1| protein RecA [Acinetobacter baumannii AB307-0294]
gi|229577096|ref|YP_001084991.2| recombinase A [Acinetobacter baumannii ATCC 17978]
gi|239501635|ref|ZP_04660945.1| recombinase A [Acinetobacter baumannii AB900]
gi|260554756|ref|ZP_05826977.1| recA protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|301348114|ref|ZP_07228855.1| recombinase A [Acinetobacter baumannii AB056]
gi|301512103|ref|ZP_07237340.1| recombinase A [Acinetobacter baumannii AB058]
gi|301597370|ref|ZP_07242378.1| recombinase A [Acinetobacter baumannii AB059]
gi|332852512|ref|ZP_08434251.1| RecA protein [Acinetobacter baumannii 6013150]
gi|332871284|ref|ZP_08439833.1| RecA protein [Acinetobacter baumannii 6013113]
gi|332873896|ref|ZP_08441836.1| RecA protein [Acinetobacter baumannii 6014059]
gi|384132509|ref|YP_005515121.1| recA [Acinetobacter baumannii 1656-2]
gi|384143510|ref|YP_005526220.1| recombinase A [Acinetobacter baumannii MDR-ZJ06]
gi|385237835|ref|YP_005799174.1| recombinase A [Acinetobacter baumannii TCDC-AB0715]
gi|387123646|ref|YP_006289528.1| protein RecA [Acinetobacter baumannii MDR-TJ]
gi|407933108|ref|YP_006848751.1| recA [Acinetobacter baumannii TYTH-1]
gi|416148628|ref|ZP_11602455.1| recombinase A [Acinetobacter baumannii AB210]
gi|417549009|ref|ZP_12200089.1| RecA protein [Acinetobacter baumannii Naval-18]
gi|417553293|ref|ZP_12204363.1| RecA protein [Acinetobacter baumannii Naval-81]
gi|417562600|ref|ZP_12213479.1| RecA protein [Acinetobacter baumannii OIFC137]
gi|417567491|ref|ZP_12218363.1| RecA protein [Acinetobacter baumannii OIFC143]
gi|417568604|ref|ZP_12219467.1| RecA protein [Acinetobacter baumannii OIFC189]
gi|417572576|ref|ZP_12223430.1| RecA protein [Acinetobacter baumannii Canada BC-5]
gi|417578012|ref|ZP_12228849.1| RecA protein [Acinetobacter baumannii Naval-17]
gi|417871744|ref|ZP_12516671.1| recombinase A [Acinetobacter baumannii ABNIH1]
gi|417873723|ref|ZP_12518588.1| recombinase A [Acinetobacter baumannii ABNIH2]
gi|417882601|ref|ZP_12526890.1| recombinase A [Acinetobacter baumannii ABNIH4]
gi|421200286|ref|ZP_15657446.1| RecA protein [Acinetobacter baumannii OIFC109]
gi|421204120|ref|ZP_15661249.1| recombinase A [Acinetobacter baumannii AC12]
gi|421457340|ref|ZP_15906677.1| RecA protein [Acinetobacter baumannii IS-123]
gi|421534471|ref|ZP_15980744.1| recombinase A [Acinetobacter baumannii AC30]
gi|421621683|ref|ZP_16062598.1| RecA protein [Acinetobacter baumannii OIFC074]
gi|421627143|ref|ZP_16067956.1| RecA protein [Acinetobacter baumannii OIFC098]
gi|421630008|ref|ZP_16070723.1| RecA protein [Acinetobacter baumannii OIFC180]
gi|421633702|ref|ZP_16074331.1| RecA protein [Acinetobacter baumannii Naval-13]
gi|421644384|ref|ZP_16084868.1| RecA protein [Acinetobacter baumannii IS-235]
gi|421645926|ref|ZP_16086381.1| RecA protein [Acinetobacter baumannii IS-251]
gi|421651720|ref|ZP_16092087.1| RecA protein [Acinetobacter baumannii OIFC0162]
gi|421658484|ref|ZP_16098717.1| RecA protein [Acinetobacter baumannii Naval-83]
gi|421664217|ref|ZP_16104357.1| RecA protein [Acinetobacter baumannii OIFC110]
gi|421675545|ref|ZP_16115466.1| RecA protein [Acinetobacter baumannii OIFC065]
gi|421677010|ref|ZP_16116904.1| RecA protein [Acinetobacter baumannii OIFC111]
gi|421686624|ref|ZP_16126371.1| RecA protein [Acinetobacter baumannii IS-143]
gi|421691636|ref|ZP_16131295.1| RecA protein [Acinetobacter baumannii IS-116]
gi|421696007|ref|ZP_16135603.1| RecA protein [Acinetobacter baumannii WC-692]
gi|421698740|ref|ZP_16138279.1| RecA protein [Acinetobacter baumannii IS-58]
gi|421703881|ref|ZP_16143337.1| recombinase A [Acinetobacter baumannii ZWS1122]
gi|421707664|ref|ZP_16147055.1| recombinase A [Acinetobacter baumannii ZWS1219]
gi|421788299|ref|ZP_16224603.1| RecA protein [Acinetobacter baumannii Naval-82]
gi|421794625|ref|ZP_16230723.1| RecA protein [Acinetobacter baumannii Naval-2]
gi|421795586|ref|ZP_16231668.1| RecA protein [Acinetobacter baumannii Naval-21]
gi|421801278|ref|ZP_16237240.1| RecA protein [Acinetobacter baumannii Canada BC1]
gi|421804378|ref|ZP_16240288.1| RecA protein [Acinetobacter baumannii WC-A-694]
gi|424052069|ref|ZP_17789601.1| protein recA [Acinetobacter baumannii Ab11111]
gi|424059633|ref|ZP_17797124.1| protein recA [Acinetobacter baumannii Ab33333]
gi|424063571|ref|ZP_17801056.1| protein recA [Acinetobacter baumannii Ab44444]
gi|425748699|ref|ZP_18866683.1| RecA protein [Acinetobacter baumannii WC-348]
gi|425751868|ref|ZP_18869809.1| RecA protein [Acinetobacter baumannii Naval-113]
gi|445405220|ref|ZP_21431197.1| RecA protein [Acinetobacter baumannii Naval-57]
gi|445461237|ref|ZP_21448650.1| RecA protein [Acinetobacter baumannii OIFC047]
gi|445471296|ref|ZP_21452049.1| RecA protein [Acinetobacter baumannii OIFC338]
gi|445475945|ref|ZP_21453578.1| RecA protein [Acinetobacter baumannii Naval-78]
gi|445492094|ref|ZP_21460041.1| RecA protein [Acinetobacter baumannii AA-014]
gi|226737747|sp|B7H1V4.1|RECA_ACIB3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|226737748|sp|B7I9U0.1|RECA_ACIB5 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238685519|sp|A3M645.2|RECA_ACIBT RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238688039|sp|B0V6E0.1|RECA_ACIBY RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238688140|sp|B0VMV7.1|RECA_ACIBS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|238691026|sp|B2I316.1|RECA_ACIBC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|169148621|emb|CAM86487.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter baumannii AYE]
gi|169152134|emb|CAP01033.1| DNA strand exchange and recombination protein with protease and
nuclease activity [Acinetobacter baumannii]
gi|183209999|gb|ACC57397.1| RecA/RadA recombinase [Acinetobacter baumannii ACICU]
gi|193077556|gb|ABO12389.2| DNA strand exchange and recombination protein [Acinetobacter
baumannii ATCC 17978]
gi|213057521|gb|ACJ42423.1| DNA strand exchange and recombination protein RecA [Acinetobacter
baumannii AB0057]
gi|213987860|gb|ACJ58159.1| protein RecA [Acinetobacter baumannii AB307-0294]
gi|260411298|gb|EEX04595.1| recA protein [Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322508729|gb|ADX04183.1| recA [Acinetobacter baumannii 1656-2]
gi|323518334|gb|ADX92715.1| recombinase A [Acinetobacter baumannii TCDC-AB0715]
gi|332729214|gb|EGJ60557.1| RecA protein [Acinetobacter baumannii 6013150]
gi|332731568|gb|EGJ62854.1| RecA protein [Acinetobacter baumannii 6013113]
gi|332737882|gb|EGJ68769.1| RecA protein [Acinetobacter baumannii 6014059]
gi|333364897|gb|EGK46911.1| recombinase A [Acinetobacter baumannii AB210]
gi|342224582|gb|EGT89608.1| recombinase A [Acinetobacter baumannii ABNIH1]
gi|342230591|gb|EGT95422.1| recombinase A [Acinetobacter baumannii ABNIH2]
gi|342237454|gb|EGU01923.1| recombinase A [Acinetobacter baumannii ABNIH4]
gi|347594003|gb|AEP06724.1| recombinase A [Acinetobacter baumannii MDR-ZJ06]
gi|385878138|gb|AFI95233.1| protein RecA [Acinetobacter baumannii MDR-TJ]
gi|395525182|gb|EJG13271.1| RecA protein [Acinetobacter baumannii OIFC137]
gi|395553163|gb|EJG19171.1| RecA protein [Acinetobacter baumannii OIFC143]
gi|395554899|gb|EJG20901.1| RecA protein [Acinetobacter baumannii OIFC189]
gi|395563887|gb|EJG25539.1| RecA protein [Acinetobacter baumannii OIFC109]
gi|395568709|gb|EJG29379.1| RecA protein [Acinetobacter baumannii Naval-17]
gi|398326280|gb|EJN42429.1| recombinase A [Acinetobacter baumannii AC12]
gi|400207064|gb|EJO38035.1| RecA protein [Acinetobacter baumannii IS-123]
gi|400208144|gb|EJO39114.1| RecA protein [Acinetobacter baumannii Canada BC-5]
gi|400386977|gb|EJP50050.1| RecA protein [Acinetobacter baumannii Naval-18]
gi|400393552|gb|EJP60598.1| RecA protein [Acinetobacter baumannii Naval-81]
gi|404562245|gb|EKA67469.1| RecA protein [Acinetobacter baumannii IS-116]
gi|404563990|gb|EKA69184.1| RecA protein [Acinetobacter baumannii WC-692]
gi|404567731|gb|EKA72848.1| RecA protein [Acinetobacter baumannii IS-143]
gi|404572059|gb|EKA77104.1| RecA protein [Acinetobacter baumannii IS-58]
gi|404664575|gb|EKB32553.1| protein recA [Acinetobacter baumannii Ab11111]
gi|404670371|gb|EKB38263.1| protein recA [Acinetobacter baumannii Ab33333]
gi|404674163|gb|EKB41923.1| protein recA [Acinetobacter baumannii Ab44444]
gi|407191431|gb|EKE62632.1| recombinase A [Acinetobacter baumannii ZWS1122]
gi|407191770|gb|EKE62960.1| recombinase A [Acinetobacter baumannii ZWS1219]
gi|407901689|gb|AFU38520.1| recA [Acinetobacter baumannii TYTH-1]
gi|408505709|gb|EKK07429.1| RecA protein [Acinetobacter baumannii IS-235]
gi|408507653|gb|EKK09347.1| RecA protein [Acinetobacter baumannii OIFC0162]
gi|408517919|gb|EKK19454.1| RecA protein [Acinetobacter baumannii IS-251]
gi|408693522|gb|EKL39125.1| RecA protein [Acinetobacter baumannii OIFC098]
gi|408697280|gb|EKL42795.1| RecA protein [Acinetobacter baumannii OIFC074]
gi|408699357|gb|EKL44837.1| RecA protein [Acinetobacter baumannii OIFC180]
gi|408706232|gb|EKL51556.1| RecA protein [Acinetobacter baumannii Naval-13]
gi|408709918|gb|EKL55157.1| RecA protein [Acinetobacter baumannii Naval-83]
gi|408712514|gb|EKL57697.1| RecA protein [Acinetobacter baumannii OIFC110]
gi|409987676|gb|EKO43856.1| recombinase A [Acinetobacter baumannii AC30]
gi|410382476|gb|EKP35030.1| RecA protein [Acinetobacter baumannii OIFC065]
gi|410393667|gb|EKP46019.1| RecA protein [Acinetobacter baumannii OIFC111]
gi|410394243|gb|EKP46581.1| RecA protein [Acinetobacter baumannii Naval-2]
gi|410401536|gb|EKP53676.1| RecA protein [Acinetobacter baumannii Naval-21]
gi|410403507|gb|EKP55599.1| RecA protein [Acinetobacter baumannii Naval-82]
gi|410405932|gb|EKP57966.1| RecA protein [Acinetobacter baumannii Canada BC1]
gi|410411749|gb|EKP63618.1| RecA protein [Acinetobacter baumannii WC-A-694]
gi|425490744|gb|EKU57039.1| RecA protein [Acinetobacter baumannii WC-348]
gi|425499624|gb|EKU65656.1| RecA protein [Acinetobacter baumannii Naval-113]
gi|444763333|gb|ELW87669.1| RecA protein [Acinetobacter baumannii AA-014]
gi|444771731|gb|ELW95856.1| RecA protein [Acinetobacter baumannii OIFC047]
gi|444772036|gb|ELW96160.1| RecA protein [Acinetobacter baumannii OIFC338]
gi|444778489|gb|ELX02501.1| RecA protein [Acinetobacter baumannii Naval-78]
gi|444781970|gb|ELX05881.1| RecA protein [Acinetobacter baumannii Naval-57]
gi|452952511|gb|EME57942.1| recombinase A [Acinetobacter baumannii MSP4-16]
Length = 349
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|290889055|gb|ADD69877.1| recombination protein A [Rhizobium sp. CCBAU 45133]
gi|290889077|gb|ADD69888.1| recombination protein A [Agrobacterium rhizogenes]
Length = 157
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 123/157 (78%)
Query: 102 STGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALD 161
STGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALD
Sbjct: 1 STGSLSLDIALGIGGLPKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALD 60
Query: 162 PSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPIN 221
P A +G+D +NLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 61 PVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMG 120
Query: 222 GMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 DSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 157
>gi|410667508|ref|YP_006919879.1| protein RecA [Thermacetogenium phaeum DSM 12270]
gi|409105255|gb|AFV11380.1| protein RecA [Thermacetogenium phaeum DSM 12270]
Length = 348
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 139/192 (72%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL LALS + FG+ S++ L VI +G+L LDLALG+GG+P+GRI+EI
Sbjct: 4 KLKALELALSHIEKAFGRGSIMRLGDTPAQLNVDVIPSGNLPLDLALGVGGIPRGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALHV+ EAQK GG A++D E+ALDP A+A+G+D +NL ++QPD+ E
Sbjct: 64 YGPESSGKTTVALHVVAEAQKRGGMAAFIDAEHALDPVYAQALGVDIDNLYVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + +TL +SG++DVIV+DSVAAL+P+ E+ + + Q+R+M+QALRK+ ++ +
Sbjct: 124 ALEITETLVRSGALDVIVIDSVAALVPRAELEGEMGDAHVGLQARLMSQALRKLTGTISK 183
Query: 246 SHTLIIFLNQVK 257
+ T IF+NQ++
Sbjct: 184 TKTTAIFINQIR 195
>gi|344323352|gb|AEN14468.1| recombination protein A [Bradyrhizobium sp. CCBAU 51317]
Length = 183
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 133/178 (74%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L + S +S+GSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH
Sbjct: 1 FGKGSVMKLGKNDRSMDVETVSSGSLGLDIALGVGGLPKGRIVEIYGPESSGKTTLALHT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ E QK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DTL +SG++D
Sbjct: 61 VAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALEICDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINKSNTMVIFINQIRM 178
>gi|260554248|ref|ZP_05826501.1| RecA/RadA recombinase [Acinetobacter sp. RUH2624]
gi|424055351|ref|ZP_17792874.1| protein recA [Acinetobacter nosocomialis Ab22222]
gi|425741964|ref|ZP_18860089.1| RecA protein [Acinetobacter baumannii WC-487]
gi|260404628|gb|EEW98145.1| RecA/RadA recombinase [Acinetobacter sp. RUH2624]
gi|407438546|gb|EKF45089.1| protein recA [Acinetobacter nosocomialis Ab22222]
gi|425489173|gb|EKU55486.1| RecA protein [Acinetobacter baumannii WC-487]
Length = 350
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|170288756|ref|YP_001738994.1| recombinase A [Thermotoga sp. RQ2]
gi|238688832|sp|B1LAG3.1|RECA_THESQ RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|170176259|gb|ACB09311.1| recA protein [Thermotoga sp. RQ2]
Length = 356
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 139/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK + L AL ++ +FGK S++ L + VI TGSL +D+A G+GG P+GRIVE
Sbjct: 6 QKKSVLEKALKRIEENFGKGSIMILGDETQVQPVEVIPTGSLAIDIATGVGGYPRGRIVE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G+E+SGKTTLALH I EAQK+GG A++D E+ALDP A+ +G+D ++LLI+QPD E
Sbjct: 66 IFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKSLLISQPDHGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VD L +SG +D+IVVDSVAAL+P+ EI + M Q+R+M+QALRKI S+
Sbjct: 126 QALEIVDELVRSGVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVN 185
Query: 245 QSHTLIIFLNQVKV 258
+S ++IF NQ+++
Sbjct: 186 KSKAVVIFTNQIRM 199
>gi|403253207|ref|ZP_10919510.1| recombinase A [Thermotoga sp. EMP]
gi|402811471|gb|EJX25957.1| recombinase A [Thermotoga sp. EMP]
Length = 355
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 139/194 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
QK + L AL ++ +FGK S++ L + VI TGSL +D+A G+GG P+GRIVE
Sbjct: 6 QKKSVLEKALKRIEENFGKGSIMILGDETQVQPVEVIPTGSLAIDIATGVGGYPRGRIVE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G+E+SGKTTLALH I EAQK+GG A++D E+ALDP A+ +G+D ++LLI+QPD E
Sbjct: 66 IFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKSLLISQPDHGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +VD L +SG +D+IVVDSVAAL+P+ EI + M Q+R+M+QALRKI S+
Sbjct: 126 QALEIVDELVRSGVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVN 185
Query: 245 QSHTLIIFLNQVKV 258
+S ++IF NQ+++
Sbjct: 186 KSKAVVIFTNQIRM 199
>gi|398849432|ref|ZP_10606173.1| protein RecA [Pseudomonas sp. GM80]
gi|398250917|gb|EJN36208.1| protein RecA [Pseudomonas sp. GM80]
Length = 351
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|83944500|ref|ZP_00956953.1| recombinase A [Sulfitobacter sp. EE-36]
gi|83844702|gb|EAP82586.1| recombinase A [Sulfitobacter sp. EE-36]
Length = 356
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 139/200 (69%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ K +K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 10 DNKKQAEKQKALDSALAQIERQFGKGSIMKLGAEGAIQDIKASSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 70 MGRIIEIYGPESSGKTTLTLHCVAEQQKNGGVCAFVDAEHALDPQYARKLGVDIDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTGSISRSNCMVIFINQIRM 209
>gi|115498185|gb|ABI98672.1| RecA [Mesorhizobium sp. CCBAU 13090]
Length = 183
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 131/178 (73%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L + TGSL LD+ALG+GGLP+GRI+EIYG E+SGKTTLALH
Sbjct: 1 FGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGRIIEIYGPESSGKTTLALHT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
+ EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+ID
Sbjct: 61 VAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAID 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 VLVVDSVAALTPRAEIEGEMGDSPPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 178
>gi|71279561|ref|YP_270789.1| recA protein [Colwellia psychrerythraea 34H]
gi|123760965|sp|Q47WN3.1|RECA_COLP3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|71145301|gb|AAZ25774.1| recA protein [Colwellia psychrerythraea 34H]
Length = 345
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL AL+Q+ FGK S++ L + ISTGSL LD+ALG GGLP GR+VEI
Sbjct: 5 KEKALSAALAQIERQFGKGSIMKLGDNT-TMDVETISTGSLGLDIALGAGGLPMGRVVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI EAQ+ G CA++D E+ALDP AE +G++ + LLI+QPD+ E
Sbjct: 64 YGPESSGKTTLTLEVIAEAQRNGKVCAFIDAEHALDPVYAEKLGVNIDELLISQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L +VD LT+SG+IDVIVVDSVAAL PK EI + + Q+R+++QA+RK+ +L +
Sbjct: 124 ALEIVDMLTRSGAIDVIVVDSVAALTPKAEIEGDMGDSHMGLQARMLSQAMRKLTGNLKK 183
Query: 246 SHTLIIFLNQVKV 258
S+T++IF+NQ+++
Sbjct: 184 SNTMLIFINQIRM 196
>gi|11387036|sp|Q9R9U2.1|RECA_PSEOL RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|5824159|emb|CAB54066.1| RecA gene protein [Pseudomonas putida]
Length = 348
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 140/196 (71%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L GS R VISTGSL LD+ALG+GGLP+GRI
Sbjct: 5 KSKALEAALSQIEKQFGKGSIMRL----GSDRTMDIDVISTGSLGLDIALGVGGLPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQ+ G CA++D E+ALDP A +G++ + LL +QPD+
Sbjct: 61 VEIYGPESSGKTTLTLSVIAEAQRQGLTCAFVDAEHALDPIYAAKLGVNIDELLCSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +VD LT+SG++++IVVDSVAAL+PK EI I + +R+M+QA+RKI +
Sbjct: 121 GEQALEIVDILTRSGAVNLIVVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKITGN 180
Query: 243 LCQSHTLIIFLNQVKV 258
L S+T+ IF+NQ+++
Sbjct: 181 LKNSNTMCIFINQIRM 196
>gi|88855434|ref|ZP_01130098.1| recombination repairing protein [marine actinobacterium PHSC20C1]
gi|88815341|gb|EAR25199.1| recombination repairing protein [marine actinobacterium PHSC20C1]
Length = 386
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ +L AL+Q+ FGK S++ R R PV I TGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 REKSLETALAQIDRQFGKGSVM---RLGSDERAPVEVIPTGSIALDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A +G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTTLTLHAIANAQRNGGIAAFIDAEHALDPEYAAKLGVDIDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSID+IV+DSVAAL+P+ EI + + Q+R+M+QALRK+ L
Sbjct: 124 EQALEIADMLVRSGSIDLIVIDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLTGGL 183
Query: 244 CQSHTLIIFLNQVK 257
Q++T +IF+NQ++
Sbjct: 184 SQTNTTMIFINQLR 197
>gi|445431866|ref|ZP_21438919.1| RecA protein [Acinetobacter baumannii OIFC021]
gi|444759249|gb|ELW83725.1| RecA protein [Acinetobacter baumannii OIFC021]
Length = 350
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|398866414|ref|ZP_10621908.1| protein RecA [Pseudomonas sp. GM78]
gi|398240644|gb|EJN26313.1| protein RecA [Pseudomonas sp. GM78]
Length = 352
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|146305465|ref|YP_001185930.1| recA protein [Pseudomonas mendocina ymp]
gi|145573666|gb|ABP83198.1| recA protein [Pseudomonas mendocina ymp]
Length = 348
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 140/196 (71%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L GS R VISTGSL LD+ALG+GGLP+GRI
Sbjct: 5 KSKALEAALSQIEKQFGKGSIMRL----GSDRTMDIDVISTGSLGLDIALGVGGLPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI EAQ+ G CA++D E+ALDP A +G++ + LL +QPD+
Sbjct: 61 VEIYGPESSGKTTLTLSVIAEAQRQGLTCAFVDAEHALDPIYAAKLGVNIDELLCSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L +VD LT+SG++++IVVDSVAAL+PK EI I + +R+M+QA+RKI +
Sbjct: 121 GEQALEIVDILTRSGAVNLIVVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKITGN 180
Query: 243 LCQSHTLIIFLNQVKV 258
L S+T+ IF+NQ+++
Sbjct: 181 LKNSNTMCIFINQIRM 196
>gi|338930797|emb|CBX55466.1| recombinase A [Bradyrhizobium japonicum]
Length = 186
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALR++ SL
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRELTASL 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|149688798|gb|ABR27810.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR +STGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESVSTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+++
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM 175
>gi|157804130|ref|YP_001492679.1| recombinase A [Rickettsia canadensis str. McKiel]
gi|166220673|sp|A8EZW1.1|RECA_RICCK RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157785393|gb|ABV73894.1| recombinase A [Rickettsia canadensis str. McKiel]
Length = 343
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 143/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPNIDIEAVSTGSLGLDMALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID++++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEITDTLIRSGGIDMVIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVKV 258
+ +++ + +F+NQ+++
Sbjct: 182 ISRTNCIAVFINQIRM 197
>gi|51246810|ref|YP_066694.1| RecA protein [Desulfotalea psychrophila LSv54]
gi|59798230|sp|Q6AIZ3.1|RECA_DESPS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|50877847|emb|CAG37687.1| probable RecA protein [Desulfotalea psychrophila LSv54]
Length = 355
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K ++ A+SQ+ FGK S++ L PVISTG+L LD+ALG+GGLPKGR+ EI
Sbjct: 9 KAGSVENAISQIQKQFGKGSIMRLGEQ-ALEAIPVISTGALSLDIALGVGGLPKGRMTEI 67
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ EAQKLGG A++D E+ALD + AE +G++ +NLL++QPD E
Sbjct: 68 YGPESSGKTTLALHVVAEAQKLGGIAAFIDAEHALDTAYAEKLGVNIDNLLVSQPDFGEQ 127
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG +D+IVVDSVAAL PK EI + ++ Q+R+M+QA+RK L +
Sbjct: 128 ALEIAEILIRSGGVDIIVVDSVAALTPKAEIDGNVGDVHVGLQARLMSQAMRKFAGVLNR 187
Query: 246 SHTLIIFLNQVKV 258
S+T++IF+NQ+++
Sbjct: 188 SNTVLIFINQIRM 200
>gi|421653964|ref|ZP_16094295.1| RecA protein [Acinetobacter baumannii Naval-72]
gi|408511814|gb|EKK13461.1| RecA protein [Acinetobacter baumannii Naval-72]
Length = 349
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|325650572|emb|CBY89469.1| RecA protein [Rhizobium leguminosarum]
gi|325650584|emb|CBY89475.1| RecA protein [Rhizobium leguminosarum]
gi|325650592|emb|CBY89479.1| RecA protein [Rhizobium leguminosarum]
gi|325650594|emb|CBY89480.1| RecA protein [Rhizobium leguminosarum]
gi|325650602|emb|CBY89484.1| RecA protein [Rhizobium leguminosarum]
gi|325650608|emb|CBY89487.1| RecA protein [Rhizobium leguminosarum]
gi|325650728|emb|CBY89547.1| RecA protein [Rhizobium leguminosarum]
gi|325650800|emb|CBY89583.1| RecA protein [Rhizobium leguminosarum]
gi|325650816|emb|CBY89591.1| RecA protein [Rhizobium leguminosarum]
gi|325650822|emb|CBY89594.1| RecA protein [Rhizobium leguminosarum]
gi|325650828|emb|CBY89597.1| RecA protein [Rhizobium leguminosarum]
gi|325650830|emb|CBY89598.1| RecA protein [Rhizobium leguminosarum]
gi|325650838|emb|CBY89602.1| RecA protein [Rhizobium leguminosarum]
gi|325650842|emb|CBY89604.1| RecA protein [Rhizobium leguminosarum]
gi|325650846|emb|CBY89606.1| RecA protein [Rhizobium leguminosarum]
gi|325650848|emb|CBY89607.1| RecA protein [Rhizobium leguminosarum]
gi|325650862|emb|CBY89614.1| RecA protein [Rhizobium leguminosarum]
gi|325650864|emb|CBY89615.1| RecA protein [Rhizobium leguminosarum]
gi|325650876|emb|CBY89621.1| RecA protein [Rhizobium leguminosarum]
gi|325650880|emb|CBY89623.1| RecA protein [Rhizobium leguminosarum]
gi|325650888|emb|CBY89627.1| RecA protein [Rhizobium leguminosarum]
gi|325651249|emb|CBY89446.1| RecA protein [Rhizobium leguminosarum]
gi|325651269|emb|CBY89456.1| RecA protein [Rhizobium leguminosarum]
gi|325651273|emb|CBY89458.1| RecA protein [Rhizobium leguminosarum]
gi|325651275|emb|CBY89459.1| RecA protein [Rhizobium leguminosarum]
Length = 183
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|195928094|gb|ACG55703.1| recombination protein A, partial [Bradyrhizobium sp. ORS 293]
gi|195928110|gb|ACG55711.1| recombination protein A, partial [Bradyrhizobium sp. ORS 321]
gi|195928168|gb|ACG55740.1| recombination protein A, partial [Bradyrhizobium sp. STM 3737]
gi|195928170|gb|ACG55741.1| recombination protein A, partial [Bradyrhizobium sp. STM 3739]
gi|195928172|gb|ACG55742.1| recombination protein A, partial [Bradyrhizobium sp. STM 3743]
gi|195928174|gb|ACG55743.1| recombination protein A, partial [Bradyrhizobium sp. STM 3792]
gi|195928176|gb|ACG55744.1| recombination protein A, partial [Bradyrhizobium sp. STM 3795]
gi|195928180|gb|ACG55746.1| recombination protein A, partial [Bradyrhizobium sp. STM 3809]
gi|195928184|gb|ACG55748.1| recombination protein A, partial [Bradyrhizobium sp. STM 3816]
gi|195928186|gb|ACG55749.1| recombination protein A, partial [Bradyrhizobium sp. STM 3825]
gi|195928188|gb|ACG55750.1| recombination protein A, partial [Bradyrhizobium sp. STM 3830]
gi|195928194|gb|ACG55753.1| recombination protein A, partial [Bradyrhizobium sp. STM 3835]
gi|195928196|gb|ACG55754.1| recombination protein A, partial [Bradyrhizobium sp. STM 3836]
gi|195928198|gb|ACG55755.1| recombination protein A, partial [Bradyrhizobium sp. STM 3839]
gi|195928200|gb|ACG55756.1| recombination protein A, partial [Bradyrhizobium sp. STM 3840]
gi|195928210|gb|ACG55761.1| recombination protein A, partial [Bradyrhizobium sp. STM 3849]
gi|195928212|gb|ACG55762.1| recombination protein A, partial [Bradyrhizobium sp. STM 3850]
gi|195928216|gb|ACG55764.1| recombination protein A, partial [Bradyrhizobium sp. STM 3954]
gi|195928220|gb|ACG55766.1| recombination protein A, partial [Bradyrhizobium sp. STM 3957]
gi|195928222|gb|ACG55767.1| recombination protein A, partial [Bradyrhizobium sp. STM 3959]
gi|195928226|gb|ACG55769.1| recombination protein A, partial [Bradyrhizobium sp. STM 3966]
gi|195928272|gb|ACG55792.1| recombination protein A, partial [Bradyrhizobium sp. STM 4523]
Length = 181
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 132/179 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALEICDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLII 251
L +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T++I
Sbjct: 123 LVRSGAVDVMVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINKSNTMVI 181
>gi|83955443|ref|ZP_00964074.1| recombinase A [Sulfitobacter sp. NAS-14.1]
gi|83840087|gb|EAP79262.1| recombinase A [Sulfitobacter sp. NAS-14.1]
Length = 348
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 139/200 (69%)
Query: 59 DDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLP 118
D+ K +K AL AL+Q+ FGK S++ L + STGSL LD+ALGIGGLP
Sbjct: 2 DNKKQAEKQKALDSALAQIERQFGKGSIMKLGAEGAIQDIKASSTGSLGLDIALGIGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
GRI+EIYG E+SGKTTL LH + E QK GG CA++D E+ALDP A +G+D + LLI+
Sbjct: 62 MGRIIEIYGPESSGKTTLTLHCVAEQQKNGGVCAFVDAEHALDPQYARKLGVDIDELLIS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+++++VVDSVAAL PK E+ + Q+R+M+QA+RK
Sbjct: 122 QPDTGEQALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVQARLMSQAMRK 181
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 182 LTGSISRSNCMVIFINQIRM 201
>gi|406036320|ref|ZP_11043684.1| recombinase A [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 348
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K+ AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KNKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|380703516|gb|AFD96727.1| RecA, partial [Bradyrhizobium sp. CCBAU 01598]
Length = 181
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 23 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 82
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 83 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 142
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 143 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 180
>gi|262372265|ref|ZP_06065544.1| recA protein [Acinetobacter junii SH205]
gi|262312290|gb|EEY93375.1| recA protein [Acinetobacter junii SH205]
Length = 348
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD+ E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|239946715|ref|ZP_04698468.1| protein RecA [Rickettsia endosymbiont of Ixodes scapularis]
gi|239920991|gb|EER21015.1| protein RecA [Rickettsia endosymbiont of Ixodes scapularis]
Length = 362
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 143/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 25 KERAIAAALTQIEKSYGKGSVMKL----GQRPNVDIEAVSTGSLGLDIALGIGGVPKGRI 80
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 81 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 140
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 141 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 200
Query: 243 LCQSHTLIIFLNQVKV 258
+ +++ + +F+NQ+++
Sbjct: 201 INRTNCITVFINQIRM 216
>gi|169883800|gb|ACA97996.1| recombination protein A, partial [Mesorhizobium septentrionale]
gi|169883802|gb|ACA97997.1| recombination protein A, partial [Mesorhizobium septentrionale]
gi|169883816|gb|ACA98004.1| recombination protein A, partial [Mesorhizobium temperatum]
gi|169883826|gb|ACA98009.1| recombination protein A, partial [Mesorhizobium amorphae]
Length = 167
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 125/162 (77%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
R + TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D
Sbjct: 1 RDRTVPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDA 60
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI
Sbjct: 61 EHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEI 120
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 EGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 162
>gi|397172857|emb|CCC58474.1| recombinase A, partial [Bradyrhizobium sp. ARR312]
gi|397172895|emb|CCC58493.1| recombinase A, partial [Bradyrhizobium sp. ARR681]
gi|397172901|emb|CCC58496.1| recombinase A, partial [Bradyrhizobium sp. ARR699]
gi|397172909|emb|CCC58500.1| recombinase A, partial [Bradyrhizobium sp. ARR766]
Length = 186
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGRIV
Sbjct: 2 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDIETVSSGSLGLDIALGVGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVMVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|379023275|ref|YP_005299936.1| recombinase A [Rickettsia canadensis str. CA410]
gi|376324213|gb|AFB21454.1| recombinase A [Rickettsia canadensis str. CA410]
Length = 343
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 143/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPNIDIEAVSTGSLGLDMALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID++++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEITDTLIRSGGIDMVIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVKV 258
+ +++ + +F+NQ+++
Sbjct: 182 ISRTNCIAVFINQIRM 197
>gi|148887233|emb|CAM12783.1| recombinase A [Ochrobactrum pseudogrignonense]
Length = 267
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 123/158 (77%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+AL
Sbjct: 8 VPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHAL 67
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 68 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 127
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 128 GDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM 165
>gi|169883818|gb|ACA98005.1| recombination protein A, partial [Mesorhizobium silamurunense]
gi|169883820|gb|ACA98006.1| recombination protein A, partial [Mesorhizobium silamurunense]
gi|169883822|gb|ACA98007.1| recombination protein A, partial [Mesorhizobium silamurunense]
gi|169883824|gb|ACA98008.1| recombination protein A, partial [Mesorhizobium silamurunense]
gi|169883844|gb|ACA98018.1| recombination protein A, partial [Mesorhizobium sp. CCBAU 25282]
Length = 167
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 125/162 (77%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
R + TGSL LD+ALG+GGLP+GRI+EIYG E+SGKTTLALH + EAQK GG CA++D
Sbjct: 1 RDRTVPTGSLGLDIALGVGGLPRGRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDA 60
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI
Sbjct: 61 EHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEI 120
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 EGEMGDALPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 162
>gi|325650898|emb|CBY89632.1| RecA protein [Rhizobium sp. R-45724=1436]
gi|325650906|emb|CBY89636.1| RecA protein [Rhizobium sp. R-45829=2041]
Length = 183
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENIVEIETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|429330738|ref|ZP_19211520.1| recombinase A [Pseudomonas putida CSV86]
gi|428764518|gb|EKX86651.1| recombinase A [Pseudomonas putida CSV86]
Length = 355
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIERQFGKGAVMRMGDH--ERQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTMTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|195928088|gb|ACG55700.1| recombination protein A, partial [Bradyrhizobium sp. ORS 280]
gi|195928090|gb|ACG55701.1| recombination protein A, partial [Bradyrhizobium sp. ORS 285]
gi|195928092|gb|ACG55702.1| recombination protein A, partial [Bradyrhizobium sp. ORS 292]
gi|195928096|gb|ACG55704.1| recombination protein A, partial [Bradyrhizobium sp. ORS 295]
gi|195928098|gb|ACG55705.1| recombination protein A, partial [Bradyrhizobium sp. ORS 297]
gi|195928108|gb|ACG55710.1| recombination protein A, partial [Bradyrhizobium sp. ORS 311]
gi|195928112|gb|ACG55712.1| recombination protein A, partial [Bradyrhizobium sp. ORS 324]
gi|195928118|gb|ACG55715.1| recombination protein A, partial [Bradyrhizobium sp. ORS 340]
gi|195928120|gb|ACG55716.1| recombination protein A, partial [Bradyrhizobium sp. ORS 341]
gi|195928122|gb|ACG55717.1| recombination protein A, partial [Bradyrhizobium sp. ORS 342]
gi|195928126|gb|ACG55719.1| recombination protein A, partial [Bradyrhizobium sp. ORS 346]
gi|195928130|gb|ACG55721.1| recombination protein A, partial [Bradyrhizobium sp. ORS 356]
gi|195928132|gb|ACG55722.1| recombination protein A, partial [Bradyrhizobium sp. ORS 359]
gi|195928134|gb|ACG55723.1| recombination protein A, partial [Bradyrhizobium sp. ORS 361]
gi|195928136|gb|ACG55724.1| recombination protein A, partial [Bradyrhizobium sp. ORS 380]
gi|195928138|gb|ACG55725.1| recombination protein A, partial [Bradyrhizobium sp. ORS 383]
gi|195928140|gb|ACG55726.1| recombination protein A, partial [Bradyrhizobium sp. ORS 384]
gi|195928142|gb|ACG55727.1| recombination protein A, partial [Bradyrhizobium sp. ORS 386]
gi|195928146|gb|ACG55729.1| recombination protein A, partial [Bradyrhizobium sp. ORS 394]
gi|195928148|gb|ACG55730.1| recombination protein A, partial [Bradyrhizobium sp. ORS 396]
gi|195928150|gb|ACG55731.1| recombination protein A, partial [Bradyrhizobium sp. ORS 397]
gi|195928152|gb|ACG55732.1| recombination protein A, partial [Bradyrhizobium sp. ORS 402]
gi|195928154|gb|ACG55733.1| recombination protein A, partial [Bradyrhizobium sp. ORS 408]
gi|195928156|gb|ACG55734.1| recombination protein A, partial [Bradyrhizobium sp. ORS 2005]
gi|195928158|gb|ACG55735.1| recombination protein A, partial [Bradyrhizobium sp. ORS 2006]
gi|195928160|gb|ACG55736.1| recombination protein A, partial [Bradyrhizobium sp. ORS 2008]
gi|195928162|gb|ACG55737.1| recombination protein A, partial [Bradyrhizobium sp. ORS 2009]
gi|195928164|gb|ACG55738.1| recombination protein A, partial [Bradyrhizobium sp. ORS 2011]
gi|195928166|gb|ACG55739.1| recombination protein A, partial [Bradyrhizobium sp. ORS 2014]
gi|195928178|gb|ACG55745.1| recombination protein A, partial [Bradyrhizobium sp. STM 3796]
gi|195928182|gb|ACG55747.1| recombination protein A, partial [Bradyrhizobium sp. STM 3810]
gi|195928190|gb|ACG55751.1| recombination protein A, partial [Bradyrhizobium sp. STM 3832]
gi|195928192|gb|ACG55752.1| recombination protein A, partial [Bradyrhizobium sp. STM 3833]
gi|195928208|gb|ACG55760.1| recombination protein A, partial [Bradyrhizobium sp. STM 3847]
gi|195928214|gb|ACG55763.1| recombination protein A, partial [Bradyrhizobium sp. STM 3953]
gi|195928228|gb|ACG55770.1| recombination protein A, partial [Bradyrhizobium sp. STM 3967]
gi|195928230|gb|ACG55771.1| recombination protein A, partial [Bradyrhizobium sp. STM 4497]
gi|195928232|gb|ACG55772.1| recombination protein A, partial [Bradyrhizobium sp. STM 4498]
gi|195928234|gb|ACG55773.1| recombination protein A, partial [Bradyrhizobium sp. STM 4499]
gi|195928236|gb|ACG55774.1| recombination protein A, partial [Bradyrhizobium sp. STM 4500]
gi|195928238|gb|ACG55775.1| recombination protein A, partial [Bradyrhizobium sp. STM 4501]
gi|195928240|gb|ACG55776.1| recombination protein A, partial [Bradyrhizobium sp. STM 4502]
gi|195928242|gb|ACG55777.1| recombination protein A, partial [Bradyrhizobium sp. STM 4503]
gi|195928244|gb|ACG55778.1| recombination protein A, partial [Bradyrhizobium sp. STM 4504]
gi|195928246|gb|ACG55779.1| recombination protein A, partial [Bradyrhizobium sp. STM 4505]
gi|195928248|gb|ACG55780.1| recombination protein A, partial [Bradyrhizobium sp. STM 4506]
gi|195928250|gb|ACG55781.1| recombination protein A, partial [Bradyrhizobium sp. STM 4508]
gi|195928252|gb|ACG55782.1| recombination protein A, partial [Bradyrhizobium sp. STM 4509]
gi|195928254|gb|ACG55783.1| recombination protein A, partial [Bradyrhizobium sp. STM 4510]
gi|195928256|gb|ACG55784.1| recombination protein A, partial [Bradyrhizobium sp. STM 4511]
gi|195928258|gb|ACG55785.1| recombination protein A, partial [Bradyrhizobium sp. STM 4512]
gi|195928260|gb|ACG55786.1| recombination protein A, partial [Bradyrhizobium sp. STM 4513]
gi|195928262|gb|ACG55787.1| recombination protein A, partial [Bradyrhizobium sp. STM 4514]
gi|195928264|gb|ACG55788.1| recombination protein A, partial [Bradyrhizobium sp. STM 4515]
gi|195928266|gb|ACG55789.1| recombination protein A, partial [Bradyrhizobium sp. STM 4516]
gi|195928268|gb|ACG55790.1| recombination protein A, partial [Bradyrhizobium sp. STM 4521]
gi|195928274|gb|ACG55793.1| recombination protein A, partial [Bradyrhizobium sp. STM 4524]
gi|195928276|gb|ACG55794.1| recombination protein A, partial [Bradyrhizobium sp. STM 4525]
gi|195928278|gb|ACG55795.1| recombination protein A, partial [Bradyrhizobium sp. STM 4543]
gi|195928280|gb|ACG55796.1| recombination protein A, partial [Bradyrhizobium sp. STM 4544]
gi|195928284|gb|ACG55798.1| recombination protein A, partial [Bradyrhizobium sp. ORS 320]
Length = 181
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 132/179 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALEICDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLII 251
L +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T++I
Sbjct: 123 LVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINKSNTMVI 181
>gi|67459613|ref|YP_247237.1| recombinase A [Rickettsia felis URRWXCal2]
gi|75535990|sp|Q4UK63.1|RECA_RICFE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|67005146|gb|AAY62072.1| RecA protein [Rickettsia felis URRWXCal2]
Length = 343
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 143/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPNIDIEAVSTGSLGLDIALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVKV 258
+ +++ + +F+NQ+++
Sbjct: 182 INRTNCITVFINQIRM 197
>gi|257056758|ref|YP_003134590.1| protein RecA [Saccharomonospora viridis DSM 43017]
gi|256586630|gb|ACU97763.1| protein RecA [Saccharomonospora viridis DSM 43017]
Length = 345
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL LAL+Q+ FGK S++ L R PV I TG++ LD+ALGIGGLP+GRIV
Sbjct: 7 KGKALDLALAQIDKQFGKGSVMRLGE---ESRPPVEVIPTGAIALDIALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+A+G+D ++LL++QPD+
Sbjct: 64 EIYGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKALGVDTDSLLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D++V+DSVAAL+P+ EI + + Q+R+M+QALRKI +L
Sbjct: 124 EQALEIADMLIRSGALDILVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGAL 183
Query: 244 CQSHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 184 HNSGTTAIFINQLR 197
>gi|441513616|ref|ZP_20995444.1| RecA protein [Gordonia amicalis NBRC 100051]
gi|441451562|dbj|GAC53405.1| RecA protein [Gordonia amicalis NBRC 100051]
Length = 347
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 139/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL LAL+Q+ +FGK S++ L R P+ I TGS+ LD+ALGIGGLP+GR+V
Sbjct: 8 REKALDLALAQIDKNFGKGSVMRLGE---ETRQPIEIIPTGSIALDVALGIGGLPRGRVV 64
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQ LGG A++D E+ALDP A +G+D + LL++QPD+
Sbjct: 65 EIYGPESSGKTTVALHAVANAQALGGIAAFIDAEHALDPDYAAKLGVDTDALLVSQPDTG 124
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D++V+DSVAAL+PK EI + + Q+R+M+QALRK+ +L
Sbjct: 125 EQALEIADMLIRSGALDILVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTSAL 184
Query: 244 CQSHTLIIFLNQVK 257
QS T IF+NQ++
Sbjct: 185 NQSKTTAIFINQLR 198
>gi|399003123|ref|ZP_10705794.1| protein RecA [Pseudomonas sp. GM18]
gi|398123527|gb|EJM13076.1| protein RecA [Pseudomonas sp. GM18]
Length = 350
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDQ--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|207080793|gb|ACI22740.1| RecA [Rhizobium sp. J3-A127]
Length = 177
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 129/177 (72%)
Query: 81 FGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHV 140
FGK S++ L +STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL
Sbjct: 1 FGKGSIMKLGANESVVEIETVSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQT 60
Query: 141 IKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSID 200
I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DTL +SG++D
Sbjct: 61 IAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVD 120
Query: 201 VIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
V+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF+NQ++
Sbjct: 121 VLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIR 177
>gi|149688794|gb|ABR27808.1| RecA [Candidatus Pelagibacter ubique]
Length = 289
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 93 FGSRRG---PVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGG 149
G RR +STGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLAL V+ EAQK GG
Sbjct: 7 LGQRRAMDVESVSTGSLSLDVALGIGGLPKGRVIEVYGPESSGKTTLALQVLAEAQKAGG 66
Query: 150 YCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAA 209
CA++D E+ALDP A+ +G+D E LLI+QPD+ E L + DTL KSGSI VIV+DSVAA
Sbjct: 67 ICAFIDAEHALDPIYAKKLGVDTEELLISQPDTGEQALEIADTLVKSGSISVIVIDSVAA 126
Query: 210 LIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
L P+ EI + + QSR+M+QALRK+ S+ ++T++IF+NQ+++
Sbjct: 127 LTPRAEIEGEMGDHHVGLQSRLMSQALRKLTGSISSTNTMMIFINQIRM 175
>gi|146741025|emb|CAJ44535.1| recombinase A [Bradyrhizobium sp. FTA7]
Length = 186
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|311337390|gb|ADP89951.1| recombinase A [Ensifer numidicus]
gi|353732276|gb|AER13718.1| recombinase A, partial [Ensifer sp. AN5]
Length = 180
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 128/180 (71%)
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEIYG
Sbjct: 1 KALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIVEIYG 60
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 61 PESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLISQPDTGEQAL 120
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 121 EITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISKSN 180
>gi|398859889|ref|ZP_10615554.1| protein RecA [Pseudomonas sp. GM79]
gi|398235825|gb|EJN21632.1| protein RecA [Pseudomonas sp. GM79]
Length = 350
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|311337394|gb|ADP89953.1| recombinase A [Ensifer numidicus]
Length = 181
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 128/180 (71%)
Query: 68 NALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYG 127
AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEIYG
Sbjct: 2 KALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIVEIYG 61
Query: 128 REASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLL 187
E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L
Sbjct: 62 PESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLENLLISQPDTGEQAL 121
Query: 188 SVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSH 247
+ DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+ S+ +S+
Sbjct: 122 EITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISKSN 181
>gi|304310615|ref|YP_003810213.1| recombinase A [gamma proteobacterium HdN1]
gi|301796348|emb|CBL44556.1| RecA/RadA recombinase [gamma proteobacterium HdN1]
Length = 343
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL AL+Q+ FGK S++ + + P ISTGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KRKALGAALAQIERQFGKGSIMRMGDQL-QQAIPAISTGSLGLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 64 YGPESSGKTTLTLSVIAQAQKQGAVCAFVDAEHALDPIYANKLGVNVDDLLVSQPDTGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +S ++DVIVVDSVAAL+P+ EI + + Q+R+M+QALRKI ++ Q
Sbjct: 124 ALEITDMLVRSNAVDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGNVKQ 183
Query: 246 SHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 184 ANCLVIFINQIRM 196
>gi|262370234|ref|ZP_06063560.1| recombinase A [Acinetobacter johnsonii SH046]
gi|381196442|ref|ZP_09903784.1| recombinase A [Acinetobacter lwoffii WJ10621]
gi|262314576|gb|EEY95617.1| recombinase A [Acinetobacter johnsonii SH046]
Length = 347
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I E QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|452748552|ref|ZP_21948330.1| recombinase A [Pseudomonas stutzeri NF13]
gi|452007458|gb|EMD99712.1| recombinase A [Pseudomonas stutzeri NF13]
Length = 347
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKRALAAALGQIEKQFGKGAVMRMGDH--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTT+ L VI EAQK+G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTMTLSVIAEAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + + Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|397172917|emb|CCC58504.1| recombinase A, partial [Bradyrhizobium sp. ARR862]
Length = 186
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 132/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 2 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETISSGSLGLDIALGVGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEIADTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|347542477|ref|YP_004857114.1| recombinase A [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985513|dbj|BAK81188.1| recombinase A [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 356
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 141/197 (71%), Gaps = 7/197 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K A+ +A+SQ+ +GK S++ L G + +STG L LD+ALGIGGLPKG
Sbjct: 5 LDKMKAIEIAMSQIEKQYGKGSIMKL----GEQSALNIESVSTGCLDLDIALGIGGLPKG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTT+ALHVI EAQK GG A++D E+ALDPS A+ +G+D ENL+I+QP
Sbjct: 61 RIIEVYGPESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + + L +SG+IDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 121 DNGEQALEIAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLA 180
Query: 241 YSLCQSHTLIIFLNQVK 257
+ +S + IF+NQ++
Sbjct: 181 GHINKSKCVAIFINQLR 197
>gi|328949866|ref|YP_004367201.1| protein recA [Marinithermus hydrothermalis DSM 14884]
gi|328450190|gb|AEB11091.1| Protein recA [Marinithermus hydrothermalis DSM 14884]
Length = 349
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
++ AL AL Q+ FGK S++ L ++ VI TGSL LDLALG+GG+P+GRI+E
Sbjct: 7 ERKKALESALKQIERQFGKGSIMRLGEAP-RQQVDVIPTGSLALDLALGVGGIPRGRIIE 65
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
+YG E+ GKTTLALH+I +AQK GG A++D E+ALDP A ++G++ ++LL++QPD+ E
Sbjct: 66 VYGPESGGKTTLALHIIAQAQKRGGVAAFVDAEHALDPVYARSLGVNVDDLLVSQPDTGE 125
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L +V+ L +SG++DVIVVDSVAAL+P+ EI + + Q+R+M+QALRK+ L
Sbjct: 126 QALEIVELLVRSGAVDVIVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTAVLA 185
Query: 245 QSHTLIIFLNQVK 257
+S+T IF+NQ++
Sbjct: 186 KSNTAAIFINQIR 198
>gi|258545021|ref|ZP_05705255.1| recombinase A [Cardiobacterium hominis ATCC 15826]
gi|258519719|gb|EEV88578.1| recombinase A [Cardiobacterium hominis ATCC 15826]
Length = 363
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 137/194 (70%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+++ AL+ L+QL FGK +++ L ISTGSL LD+ALGIGGLP+GRIVE
Sbjct: 8 EQEKALKAVLAQLDKQFGKGTVMRLGDQTTEHDIQAISTGSLGLDIALGIGGLPRGRIVE 67
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL LHVI EAQK GG A++D E+ALDP A +G++ ++L I QPD+ E
Sbjct: 68 IYGPESSGKTTLTLHVIAEAQKAGGTAAFIDAEHALDPIYARKLGVNTDDLYITQPDTGE 127
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +SG+ VIV+DSVAAL PK EI + + Q+R+M+QALRK+ ++
Sbjct: 128 QALEIADALVRSGAFSVIVIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIK 187
Query: 245 QSHTLIIFLNQVKV 258
+++TL+IF+NQ+++
Sbjct: 188 RANTLVIFINQIRM 201
>gi|329896396|ref|ZP_08271495.1| RecA protein [gamma proteobacterium IMCC3088]
gi|328921816|gb|EGG29187.1| RecA protein [gamma proteobacterium IMCC3088]
Length = 345
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 140/195 (71%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL+Q+ FGK +++ R S R P ISTGSL LD+ALGIGGLPKGRI
Sbjct: 5 KQKALEAALAQIERQFGKGTVM---RMGDSERVAIPSISTGSLGLDIALGIGGLPKGRIC 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI EAQKLGG A++D E+ALDP AE +G+ ++L+++QPD+
Sbjct: 62 EIYGPESSGKTTLTLQVIAEAQKLGGTAAFIDAEHALDPIYAERLGVQVDDLILSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L V + L +SG++DV+VVDSVAAL PK EI + + Q+R+++QA+RK+ S+
Sbjct: 122 EQALEVTEMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDSHVGLQARLLSQAMRKLTGSI 181
Query: 244 CQSHTLIIFLNQVKV 258
Q++ L+IF+NQ+++
Sbjct: 182 KQTNCLVIFINQIRM 196
>gi|309803080|ref|ZP_07697179.1| RecA protein [Lactobacillus iners LactinV 11V1-d]
gi|308164861|gb|EFO67109.1| RecA protein [Lactobacillus iners LactinV 11V1-d]
Length = 345
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 141/193 (73%), Gaps = 1/193 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL LAL ++ +FGK +++ + ++ ISTGS+ LD ALG+GG P+GRI+E
Sbjct: 5 EKKAALELALKKIEKNFGKGAVMRMGEKVDTKI-STISTGSIALDTALGVGGYPRGRIIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
+YG E+SGKTT+ALH + E QK GG AY+D ENA+DP+ AEA+G+D ++L+++QP++ E
Sbjct: 64 VYGPESSGKTTVALHAVAEVQKNGGTAAYIDAENAMDPAYAEALGVDIDSLILSQPNTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + DTL SG+ID++VVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 124 EGLQIADTLISSGAIDILVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGNIS 183
Query: 245 QSHTLIIFLNQVK 257
++ T+ IF+NQ++
Sbjct: 184 KTKTIAIFINQIR 196
>gi|148273206|ref|YP_001222767.1| recombinase A [Clavibacter michiganensis subsp. michiganensis NCPPB
382]
gi|166220639|sp|A5CSL7.1|RECA_CLAM3 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|147831136|emb|CAN02088.1| recombinase A [Clavibacter michiganensis subsp. michiganensis NCPPB
382]
Length = 362
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ +L AL+Q+ FGK S++ R R PV I TGS+ LD+ALGIGGLP+GRIV
Sbjct: 7 REKSLETALAQIDRQFGKGSVM---RLGSDERAPVAVIPTGSVALDVALGIGGLPRGRIV 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A+ +G+D + LL++QPD+
Sbjct: 64 EIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPEYAKKLGVDIDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SGSID++V+DSVAAL+P+ EI + + Q+R+M+QALRK+ L
Sbjct: 124 EQALEIADMLVRSGSIDLVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGGL 183
Query: 244 CQSHTLIIFLNQVK 257
Q+ T +IF+NQ++
Sbjct: 184 NQTQTTMIFINQLR 197
>gi|398996620|ref|ZP_10699471.1| protein RecA [Pseudomonas sp. GM21]
gi|398126203|gb|EJM15646.1| protein RecA [Pseudomonas sp. GM21]
Length = 350
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDQ--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|379011812|ref|YP_005269624.1| recombinase A [Acetobacterium woodii DSM 1030]
gi|375302601|gb|AFA48735.1| recombinase A [Acetobacterium woodii DSM 1030]
Length = 359
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 142/203 (69%)
Query: 55 DEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGI 114
D+ + + K AL AL + FGK +++ L VIST S+ LD+ALG+
Sbjct: 3 DKTKTNEQFSDKQKALDAALKNIERSFGKGAVMRLGDDAAKLNVDVISTSSIGLDMALGV 62
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GG+P+GR+VEIYG E+SGKTTLALH+I EAQ+ GG A++D E+ALDP+ A+A+G+D +N
Sbjct: 63 GGVPRGRVVEIYGPESSGKTTLALHIIAEAQRTGGNAAFVDAEHALDPTYAKALGVDIDN 122
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL+AQPD+ E + +V+ L +S +IDV+V+DSVAAL+P+ EI + + Q+R+M+Q
Sbjct: 123 LLVAQPDTGEQAMEIVEALVRSNAIDVVVIDSVAALVPRAEIDGEMGDSHMGLQARLMSQ 182
Query: 235 ALRKIHYSLCQSHTLIIFLNQVK 257
ALRK+ + +S+T IF+NQ++
Sbjct: 183 ALRKLTGVIKKSNTTTIFINQLR 205
>gi|343522848|ref|ZP_08759814.1| RecA protein [Actinomyces sp. oral taxon 175 str. F0384]
gi|343402257|gb|EGV14763.1| RecA protein [Actinomyces sp. oral taxon 175 str. F0384]
Length = 413
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 139/199 (69%), Gaps = 5/199 (2%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLP 118
++ + AL AL+Q+ FGK S++ R R PV I TGS+ LD+ALG+GGLP
Sbjct: 5 SQTQDRSKALATALAQIDKSFGKGSVM---RLGDESRPPVSVIPTGSVALDVALGVGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVE+YG E+SGKTT+ALH + AQ+ GG A++D E+ALDP A+A+G+D +NLL++
Sbjct: 62 RGRIVEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG +D+IV+DSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 122 QPDTGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 181
Query: 239 IHYSLCQSHTLIIFLNQVK 257
I +L + T IF+NQ++
Sbjct: 182 ITGALSSTGTTAIFINQLR 200
>gi|398843169|ref|ZP_10600319.1| protein RecA [Pseudomonas sp. GM102]
gi|398902815|ref|ZP_10651269.1| protein RecA [Pseudomonas sp. GM50]
gi|398942995|ref|ZP_10670633.1| protein RecA [Pseudomonas sp. GM41(2012)]
gi|407366114|ref|ZP_11112646.1| recombinase A [Pseudomonas mandelii JR-1]
gi|296932699|gb|ADH93503.1| recombinase A [Pseudomonas sp. In5]
gi|398103987|gb|EJL94146.1| protein RecA [Pseudomonas sp. GM102]
gi|398159926|gb|EJM48212.1| protein RecA [Pseudomonas sp. GM41(2012)]
gi|398177908|gb|EJM65569.1| protein RecA [Pseudomonas sp. GM50]
Length = 350
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDQ--DRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|402703063|ref|ZP_10851042.1| recombinase A [Rickettsia helvetica C9P9]
Length = 343
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 143/196 (72%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKGRI
Sbjct: 6 KERAIAAALAQIEKSYGKGSVMKL----GQRPNVDIEAVSTGSLGLDIALGIGGVPKGRI 61
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QPD+
Sbjct: 62 IEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQPDT 121
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+ S
Sbjct: 122 GEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLTAS 181
Query: 243 LCQSHTLIIFLNQVKV 258
+ +++ + +F+NQ+++
Sbjct: 182 INRTNCITVFINQIRM 197
>gi|114562240|ref|YP_749753.1| recombinase A [Shewanella frigidimarina NCIMB 400]
gi|122300464|sp|Q086A0.1|RECA_SHEFN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|114333533|gb|ABI70915.1| recA protein [Shewanella frigidimarina NCIMB 400]
Length = 354
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 137/197 (69%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKL----GEDRTMDVETISTGSLSLDIALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVKV 258
+L QS+TL+IF+NQ+++
Sbjct: 182 NLKQSNTLLIFINQIRM 198
>gi|345099546|gb|AEN69103.1| recombinase A protein, partial [Rhizobium grahamii]
Length = 184
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 130/184 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDNLPGLQARLMSQALRKLTASISK 180
Query: 246 SHTL 249
S+T+
Sbjct: 181 SNTM 184
>gi|90193547|gb|ABD92366.1| RecA [Rhizobium lusitanum]
Length = 186
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 130/186 (69%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 180
Query: 242 SLCQSH 247
S+ +S+
Sbjct: 181 SISKSN 186
>gi|170676512|gb|ACB30409.1| recombinase A [Rhizobium giardinii]
Length = 167
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 124/162 (76%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
R +STGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLAL I EAQK GG CA++D
Sbjct: 1 RDRTVSTGSLSLDIALGIGGLPKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDA 60
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+V+DSVAAL P+ EI
Sbjct: 61 EHALDPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVIDSVAALTPRAEI 120
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 121 EGEMGDSLPGLQARLMSQALRKLTASISKSNCMVIFINQIRM 162
>gi|296282672|ref|ZP_06860670.1| recombinase A [Citromicrobium bathyomarinum JL354]
Length = 354
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 151/216 (69%), Gaps = 11/216 (5%)
Query: 46 SAAEVPEFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVIS 102
+AA++ DD+ + + + AL AL+Q+ FGK S + L GS+ IS
Sbjct: 2 AAAKLKLVDDKETN----VDRQKALDAALAQIDRAFGKGSAMKL----GSKETMNVESIS 53
Query: 103 TGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDP 162
TGSL LD+ALGIGGLPKGR++E+YG E+SGKTTLALHVI EAQK GG A++D E+ALDP
Sbjct: 54 TGSLGLDIALGIGGLPKGRVIEVYGPESSGKTTLALHVIAEAQKAGGTAAFVDAEHALDP 113
Query: 163 SLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPING 222
A+ +G+D + L+++QPD+ E L + DTL +S +IDV+VVDSVAAL+P+ EI +
Sbjct: 114 VYAKKLGVDIDELIVSQPDTGEQALEITDTLVRSNAIDVLVVDSVAALVPRAEIEGEMGD 173
Query: 223 MYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+Q+LRK+ S+ +S ++IF+NQ+++
Sbjct: 174 SHVGLQARLMSQSLRKLTGSINRSKCMVIFINQLRM 209
>gi|260907234|ref|ZP_05915556.1| recA protein [Brevibacterium linens BL2]
Length = 370
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ ++GK +++ L R P+ I TGS+ LD+ALGIGGLP+GR+V
Sbjct: 16 KSKALDAALGQIDRNYGKGAIMRLGEGV---REPIACIPTGSIALDIALGIGGLPRGRVV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+ +G+D + LL++QPD+
Sbjct: 73 EIYGPESSGKTTVALHAVANAQKTGGIAAFIDAEHALDPEYAKKLGVDTDQLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++DVIV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKIAGAL 192
Query: 244 CQSHTLIIFLNQVK 257
QS T IF+NQ++
Sbjct: 193 SQSKTTAIFINQLR 206
>gi|397172853|emb|CCC58472.1| recombinase A, partial [Bradyrhizobium sp. ARR65]
gi|397172855|emb|CCC58473.1| recombinase A, partial [Bradyrhizobium sp. ARR286]
gi|397172903|emb|CCC58497.1| recombinase A, partial [Bradyrhizobium sp. ARR705]
gi|397172911|emb|CCC58501.1| recombinase A, partial [Bradyrhizobium sp. ARR781]
Length = 186
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGRIV
Sbjct: 2 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDIALGVGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPRAELEGEMGEALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|425743838|ref|ZP_18861906.1| RecA protein [Acinetobacter baumannii WC-323]
gi|425492702|gb|EKU58955.1| RecA protein [Acinetobacter baumannii WC-323]
Length = 348
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL+ ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 5 KSKALQAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIIEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKNGGTCAFIDAEHALDPEYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|409202684|ref|ZP_11230887.1| recombinase A [Pseudoalteromonas flavipulchra JG1]
Length = 351
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 138/196 (70%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL ALSQ+ FGK S++ L G + ISTGSL LD+ALGIGGLP GRI
Sbjct: 5 KQKALDAALSQIERQFGKGSIMKL----GENKALDIEAISTGSLGLDIALGIGGLPTGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L I EAQKLG CA++D E+ALDP AE +G++ + LL++QPD+
Sbjct: 61 VEIYGPESSGKTTLTLQAIAEAQKLGKTCAFVDAEHALDPIYAEKLGVNVDELLVSQPDT 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG++D++V+DSVAAL PK EI + + Q+R+M+QALRK+ +
Sbjct: 121 GEQALEICDMLVRSGAVDLVVIDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTAN 180
Query: 243 LCQSHTLIIFLNQVKV 258
+ +S+TL IF+NQ+++
Sbjct: 181 IKRSNTLCIFINQIRM 196
>gi|406917941|gb|EKD56608.1| hypothetical protein ACD_58C00134G0003 [uncultured bacterium]
Length = 348
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 141/200 (70%), Gaps = 15/200 (7%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K AL +AL + +FGK S++ L G + ISTGSL LDLALG+GGLP+GRI
Sbjct: 18 KKVALEMALESIEKEFGKGSIMRL----GQTKALDVQTISTGSLSLDLALGVGGLPRGRI 73
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG EASGKTTLA+HV+ E+QK GG AY+D E+A DP A+ +GI+ + LLI+QPD+
Sbjct: 74 VEIYGPEASGKTTLAMHVVAESQKNGGLAAYIDAEHAFDPEYAKRLGINIDELLISQPDT 133
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQ----SRIMTQALRK 238
E L + +TL +S ++DV+V+DSVAAL+PK E I G D+Q +R+M+QALRK
Sbjct: 134 GEQALEITETLVRSNAVDVLVIDSVAALVPKSE----IEGEMGDSQMGVHARLMSQALRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ + +S T+IIF+NQ+++
Sbjct: 190 LTGVVSKSKTVIIFINQIRM 209
>gi|120598088|ref|YP_962662.1| recombinase A [Shewanella sp. W3-18-1]
gi|146293841|ref|YP_001184265.1| recombinase A [Shewanella putrefaciens CN-32]
gi|386314590|ref|YP_006010755.1| recA protein [Shewanella putrefaciens 200]
gi|166220680|sp|A4Y933.1|RECA_SHEPC RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|166220682|sp|A1RHG3.1|RECA_SHESW RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|120558181|gb|ABM24108.1| recA protein [Shewanella sp. W3-18-1]
gi|145565531|gb|ABP76466.1| recA protein [Shewanella putrefaciens CN-32]
gi|319427215|gb|ADV55289.1| recA protein [Shewanella putrefaciens 200]
Length = 357
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 137/197 (69%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVKV 258
+L QS+TL+IF+NQ+++
Sbjct: 182 NLKQSNTLLIFINQIRM 198
>gi|380703508|gb|AFD96723.1| RecA, partial [Mesorhizobium sp. CCBAU 01577]
gi|380703514|gb|AFD96726.1| RecA, partial [Mesorhizobium sp. CCBAU 01597]
Length = 177
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 17 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 76
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 77 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 136
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 137 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 174
>gi|417962082|ref|ZP_12604362.1| Protein recA, partial [Candidatus Arthromitus sp. SFB-2]
gi|380331197|gb|EIA22281.1| Protein recA, partial [Candidatus Arthromitus sp. SFB-2]
Length = 324
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 141/197 (71%), Gaps = 7/197 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K A+ +A+SQ+ +GK S++ L G + +STG L LD+ALGIGGLPKG
Sbjct: 4 LDKMKAIEMAMSQIEKQYGKGSIMKL----GEQSALNIESVSTGCLDLDIALGIGGLPKG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTT+ALHVI EAQK GG A++D E+ALDPS A+ +G+D ENL+I+QP
Sbjct: 60 RIIEVYGPESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + + L +SG+IDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 120 DNGEQALEIAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLA 179
Query: 241 YSLCQSHTLIIFLNQVK 257
+ +S + IF+NQ++
Sbjct: 180 GHINKSKCVAIFINQLR 196
>gi|126567364|dbj|BAF48339.1| RecA protein [Amorphomonas oryzae]
Length = 190
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 130/185 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ +FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 3 KSVDKSKALEAALSQIERNFGKGSIMKLGANESVVEIETVSTGSLSLDIALGIGGLPKGR 62
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 63 IVEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 122
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 123 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDNLPGMQARLMSQALRKLTA 182
Query: 242 SLCQS 246
S+ +S
Sbjct: 183 SISRS 187
>gi|345547477|gb|AEO12096.1| RecA [Phyllobacterium sp. CNXE1]
gi|345547479|gb|AEO12097.1| RecA [Phyllobacterium sp. CNXF1]
Length = 163
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 123/159 (77%)
Query: 100 VISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENA 159
+ TGSL LD+ALG+GGLPKGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+A
Sbjct: 4 TVPTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHA 63
Query: 160 LDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVP 219
LDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI
Sbjct: 64 LDPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGE 123
Query: 220 INGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 124 MGDSLPGLQARLMSQALRKLTASISRSNCMVIFINQIRM 162
>gi|290889085|gb|ADD69892.1| recombination protein A [Rhizobium alamii]
Length = 157
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/157 (59%), Positives = 123/157 (78%)
Query: 102 STGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALD 161
STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALD
Sbjct: 1 STGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALD 60
Query: 162 PSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPIN 221
P A +G+D +NLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 61 PVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMG 120
Query: 222 GMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 DSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 157
>gi|256390779|ref|YP_003112343.1| recA protein [Catenulispora acidiphila DSM 44928]
gi|256357005|gb|ACU70502.1| recA protein [Catenulispora acidiphila DSM 44928]
Length = 383
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 143/200 (71%), Gaps = 7/200 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRR-GPV--ISTGSLKLDLALGIGGL 117
A ++ AL AL+Q+ +FGK S++ L G+R P+ I TGS+ LD+ALGIGGL
Sbjct: 3 ATTTDREKALDAALAQIERNFGKGSVMRL----GARSVQPIDIIPTGSIALDVALGIGGL 58
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GR+VEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A +G+D + LLI
Sbjct: 59 PRGRVVEIYGPESSGKTTIALHAVANAQKAGGQAAFIDAEHALDPDYARNIGVDTDLLLI 118
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALR
Sbjct: 119 SQPDTGEQALEIADTLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALR 178
Query: 238 KIHYSLCQSHTLIIFLNQVK 257
K+ + Q++T +IF+NQ++
Sbjct: 179 KLTGVIHQTNTTVIFINQLR 198
>gi|383784750|ref|YP_005469320.1| recombinase A [Leptospirillum ferrooxidans C2-3]
gi|383083663|dbj|BAM07190.1| RecA protein [Leptospirillum ferrooxidans C2-3]
Length = 357
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 139/199 (69%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
+ K + + +L LALSQ+ FGK S++ L + P I TGSL LDLALGIGG P+
Sbjct: 3 EEKEVNRQRSLELALSQIEKQFGKGSIMRLGKDQPVVVVPAIPTGSLSLDLALGIGGYPR 62
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GR+VEI+G E+SGKTTL L I E K GG A++D E+ALD S A +G+ E+LLI+Q
Sbjct: 63 GRVVEIFGPESSGKTTLTLQAIAEVHKRGGIAAFIDAEHALDISYARKLGVKTEDLLISQ 122
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + +TL +SGSID++VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 123 PDTGEQALEIAETLVRSGSIDLVVVDSVAALVPKAELEGEMGDSHMGLQARLMSQALRKL 182
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S+T +IF+NQ+++
Sbjct: 183 TSSISKSNTTVIFINQIRM 201
>gi|374281868|gb|AEZ04937.1| recombinase A, partial [Rhizobium etli]
Length = 182
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 130/181 (71%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEIYG E+SG
Sbjct: 2 ALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGRIVEIYGPESSG 61
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E L + DT
Sbjct: 62 KTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQALEITDT 121
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+ ++IF
Sbjct: 122 LVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTASISKSNCMVIF 181
Query: 253 L 253
+
Sbjct: 182 I 182
>gi|259501046|ref|ZP_05743948.1| recombination protein A [Lactobacillus iners DSM 13335]
gi|302190505|ref|ZP_07266759.1| recombinase A [Lactobacillus iners AB-1]
gi|309804581|ref|ZP_07698646.1| RecA protein [Lactobacillus iners LactinV 09V1-c]
gi|309806995|ref|ZP_07700977.1| RecA protein [Lactobacillus iners LactinV 03V1-b]
gi|309810010|ref|ZP_07703857.1| RecA protein [Lactobacillus iners SPIN 2503V10-D]
gi|312870696|ref|ZP_07730804.1| RecA protein [Lactobacillus iners LEAF 3008A-a]
gi|312872582|ref|ZP_07732650.1| RecA protein [Lactobacillus iners LEAF 2062A-h1]
gi|312874360|ref|ZP_07734391.1| RecA protein [Lactobacillus iners LEAF 2052A-d]
gi|312874818|ref|ZP_07734837.1| RecA protein [Lactobacillus iners LEAF 2053A-b]
gi|315653894|ref|ZP_07906810.1| recombination protein A [Lactobacillus iners ATCC 55195]
gi|325911397|ref|ZP_08173809.1| RecA protein [Lactobacillus iners UPII 143-D]
gi|325913184|ref|ZP_08175554.1| RecA protein [Lactobacillus iners UPII 60-B]
gi|329920431|ref|ZP_08277163.1| protein RecA [Lactobacillus iners SPIN 1401G]
gi|349611790|ref|ZP_08891020.1| recA [Lactobacillus sp. 7_1_47FAA]
gi|259167740|gb|EEW52235.1| recombination protein A [Lactobacillus iners DSM 13335]
gi|308165973|gb|EFO68191.1| RecA protein [Lactobacillus iners LactinV 09V1-c]
gi|308166615|gb|EFO68812.1| RecA protein [Lactobacillus iners LactinV 03V1-b]
gi|308169650|gb|EFO71696.1| RecA protein [Lactobacillus iners SPIN 2503V10-D]
gi|311089563|gb|EFQ47988.1| RecA protein [Lactobacillus iners LEAF 2053A-b]
gi|311090126|gb|EFQ48539.1| RecA protein [Lactobacillus iners LEAF 2052A-d]
gi|311091944|gb|EFQ50320.1| RecA protein [Lactobacillus iners LEAF 2062A-h1]
gi|311093807|gb|EFQ52143.1| RecA protein [Lactobacillus iners LEAF 3008A-a]
gi|315488590|gb|EFU78236.1| recombination protein A [Lactobacillus iners ATCC 55195]
gi|325476747|gb|EGC79901.1| RecA protein [Lactobacillus iners UPII 143-D]
gi|325477605|gb|EGC80747.1| RecA protein [Lactobacillus iners UPII 60-B]
gi|328936107|gb|EGG32560.1| protein RecA [Lactobacillus iners SPIN 1401G]
gi|348608255|gb|EGY58240.1| recA [Lactobacillus sp. 7_1_47FAA]
Length = 345
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 141/193 (73%), Gaps = 1/193 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL LAL ++ +FGK +++ + ++ ISTGS+ LD ALG+GG P+GRI+E
Sbjct: 5 EKKAALELALKKIEKNFGKGAVMRMGEKVDTKI-STISTGSIALDTALGVGGYPRGRIIE 63
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
+YG E+SGKTT+ALH + E QK GG AY+D ENA+DP+ AEA+G+D ++L+++QP++ E
Sbjct: 64 VYGPESSGKTTVALHAVAEVQKNGGTAAYIDAENAMDPAYAEALGVDIDSLILSQPNTGE 123
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + DTL SG+ID++VVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++
Sbjct: 124 EGLQIADTLISSGAIDILVVDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGNIS 183
Query: 245 QSHTLIIFLNQVK 257
++ T+ IF+NQ++
Sbjct: 184 KTKTIAIFINQIR 196
>gi|357057784|ref|ZP_09118642.1| RecA protein [Selenomonas infelix ATCC 43532]
gi|355375032|gb|EHG22323.1| RecA protein [Selenomonas infelix ATCC 43532]
Length = 377
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 137/194 (70%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M +D AL AL Q+ + GK +++ L + VISTG L LD+ALG+GG+P+GRI+
Sbjct: 15 MTRDEALENALKQIEKNHGKGAIMRLGEAKANMNIEVISTGILPLDIALGVGGIPRGRII 74
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ LH+I EAQK GG A++D E+ALDP A +G++ E+LLI+QPD+
Sbjct: 75 EVYGPESSGKTTVTLHMIAEAQKAGGLAAFIDAEHALDPEYARKLGVNTEDLLISQPDTG 134
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L +VD L SG+ID+IVVDSVAAL+PK EI + Q+R+M+QA+RK+ +
Sbjct: 135 EQALEIVDALVHSGAIDIIVVDSVAALVPKSEIEGDMGSSVVGLQARLMSQAMRKLTGII 194
Query: 244 CQSHTLIIFLNQVK 257
++ T+ +F+NQ++
Sbjct: 195 SKTRTVAVFINQLR 208
>gi|91204932|ref|YP_537287.1| recombinase A [Rickettsia bellii RML369-C]
gi|122990947|sp|Q1RKB6.1|RECA_RICBR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|91068476|gb|ABE04198.1| RecA [Rickettsia bellii RML369-C]
Length = 343
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 144/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKG
Sbjct: 4 IDKEKAVAAALAQIEKSYGKGSVMKL----GQRPNVDIESVSTGSLGLDIALGIGGIPKG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QP
Sbjct: 60 RIIEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+
Sbjct: 120 DTGEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +++ + +F+NQ+++
Sbjct: 180 ASINRTNCITVFINQIRM 197
>gi|289812921|gb|ADD20921.1| recombinase A, partial [Mesorhizobium sp. CCBAU 33182]
Length = 164
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 5 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 64
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 65 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 124
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 125 GDALPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 162
>gi|322510283|gb|ADX05527.1| recombination protein A [Sinorhizobium sp. CCBAU 05591]
Length = 168
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL + EAQK GG CA++D E+AL
Sbjct: 6 VSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTVAEAQKKGGICAFVDAEHAL 65
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI +
Sbjct: 66 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEM 125
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 126 GDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 163
>gi|400293076|ref|ZP_10794961.1| RecA protein [Actinomyces naeslundii str. Howell 279]
gi|399901782|gb|EJN84652.1| RecA protein [Actinomyces naeslundii str. Howell 279]
Length = 413
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 140/199 (70%), Gaps = 5/199 (2%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLP 118
++ + AL AL+Q+ +FGK S++ R R PV I TGS+ LD+ALG+GGLP
Sbjct: 5 SQTQDRSKALATALAQIDKNFGKGSVM---RLGDDTRPPVSVIPTGSVALDVALGVGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRI+E+YG E+SGKTT+ALH + AQ+ GG A++D E+ALDP A+A+G+D +NLL++
Sbjct: 62 RGRIIEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG +D+IV+DSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 122 QPDTGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 181
Query: 239 IHYSLCQSHTLIIFLNQVK 257
I +L + T IF+NQ++
Sbjct: 182 ITGALSSTGTTAIFINQLR 200
>gi|342732418|ref|YP_004771257.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384455827|ref|YP_005668422.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417964690|ref|ZP_12606377.1| Protein recA [Candidatus Arthromitus sp. SFB-4]
gi|417969040|ref|ZP_12610005.1| Protein recA [Candidatus Arthromitus sp. SFB-co]
gi|418016167|ref|ZP_12655732.1| recombination protein A [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418372685|ref|ZP_12964777.1| Protein RecA [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329873|dbj|BAK56515.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345506502|gb|EGX28796.1| recombination protein A [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984170|dbj|BAK79846.1| recombinase A [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380338611|gb|EIA27488.1| Protein recA [Candidatus Arthromitus sp. SFB-co]
gi|380340558|gb|EIA29135.1| Protein recA [Candidatus Arthromitus sp. SFB-4]
gi|380342354|gb|EIA30799.1| Protein RecA [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 357
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 141/197 (71%), Gaps = 7/197 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K A+ +A+SQ+ +GK S++ L G + +STG L LD+ALGIGGLPKG
Sbjct: 5 LDKMKAIEMAMSQIEKQYGKGSIMKL----GEQSALNIESVSTGCLDLDIALGIGGLPKG 60
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+E+YG E+SGKTT+ALHVI EAQK GG A++D E+ALDPS A+ +G+D ENL+I+QP
Sbjct: 61 RIIEVYGPESSGKTTVALHVIAEAQKKGGAAAFIDAEHALDPSYAKNLGVDTENLIISQP 120
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + + L +SG+IDVIV+DSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 121 DNGEQALEIAEALVRSGAIDVIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLA 180
Query: 241 YSLCQSHTLIIFLNQVK 257
+ +S + IF+NQ++
Sbjct: 181 GHINKSKCVAIFINQLR 197
>gi|298566892|gb|ADI86522.1| recombination protein A [Sinorhizobium fredii]
Length = 164
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 124/162 (76%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
R +STGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLAL I EAQK GG C ++D
Sbjct: 1 RDRTVSTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDA 60
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI
Sbjct: 61 EHALDPIYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEI 120
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 121 EGEMGDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 162
>gi|158631772|gb|ABW74991.1| RecA [Mesorhizobium gobiense]
Length = 160
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 1 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 60
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 61 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 120
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 158
>gi|25005322|emb|CAD44255.1| RecA protein [Ensifer adhaerens]
Length = 183
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 129/182 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGGKDSIIEIETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+V+DSVAAL+P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 180
Query: 246 SH 247
S+
Sbjct: 181 SN 182
>gi|373502107|gb|AEY75270.1| recombinase A, partial [Sinorhizobium americanum]
Length = 159
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL + EAQK GG CA++D E+AL
Sbjct: 2 VSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTVAEAQKKGGICAFVDAEHAL 61
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI +
Sbjct: 62 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEM 121
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 122 GDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 159
>gi|345547485|gb|AEO12100.1| RecA [Rhizobium sp. CNXE6]
Length = 165
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+AL
Sbjct: 6 VSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHAL 65
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+V+DSVAAL P+ EI +
Sbjct: 66 DPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEM 125
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 126 GDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIRM 163
>gi|332670081|ref|YP_004453089.1| recA protein [Cellulomonas fimi ATCC 484]
gi|332339119|gb|AEE45702.1| recA protein [Cellulomonas fimi ATCC 484]
Length = 346
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
++ AL ALSQ+ FGK S++ R R PV I TGS+ LD+ALGIGGLP+GRI+
Sbjct: 7 REKALEAALSQIDRQFGKGSIM---RLGDEGRPPVEVIPTGSIALDVALGIGGLPRGRII 63
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTT+ALH + AQK GG A++D E+ALDP A+ +G+D + LL++QPD+
Sbjct: 64 EVYGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKKLGVDTDALLVSQPDTG 123
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L ++D L +SG+ID+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 124 EQALEIMDMLIRSGAIDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 183
Query: 244 CQSHTLIIFLNQVK 257
S T IF+NQ++
Sbjct: 184 NASGTTAIFINQLR 197
>gi|325068442|ref|ZP_08127115.1| recA protein [Actinomyces oris K20]
Length = 413
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 139/199 (69%), Gaps = 5/199 (2%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLP 118
++ + AL AL+Q+ FGK S++ R R PV I TGS+ LD+ALG+GGLP
Sbjct: 5 SQTQDRSKALATALAQIDKSFGKGSVM---RLGDESRPPVSVIPTGSVALDVALGVGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVE+YG E+SGKTT+ALH + AQ+ GG A++D E+ALDP A+A+G+D +NLL++
Sbjct: 62 RGRIVEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG +D+IV+DSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 122 QPDTGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 181
Query: 239 IHYSLCQSHTLIIFLNQVK 257
I +L + T IF+NQ++
Sbjct: 182 ITGALSSTGTTAIFINQLR 200
>gi|187251927|ref|YP_001876409.1| recA protein [Elusimicrobium minutum Pei191]
gi|186972087|gb|ACC99072.1| RecA protein [Elusimicrobium minutum Pei191]
Length = 353
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 140/193 (72%), Gaps = 3/193 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGS-RRGPVISTGSLKLDLALGIGGLPKGRIVE 124
K AL LA+SQ+ FGKE++L L GS ++ ISTG+L LDLALG+GG+P+GR++E
Sbjct: 5 KAKALELAMSQIEKSFGKEAILKLGA--GSIKKIDAISTGALSLDLALGVGGVPRGRVIE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG EA GKTTL+LH+ +AQK GG A++D E+ALDP A ++G+D + L ++QPDS E
Sbjct: 63 IYGPEAGGKTTLSLHIAAQAQKSGGVVAFIDAEHALDPVYANSIGVDVDELFVSQPDSGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG+ID+I++DSVAAL+P+ EI + + Q+R+M+QALRK+ L
Sbjct: 123 QALEIAEKLVRSGAIDLIIIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTSLLA 182
Query: 245 QSHTLIIFLNQVK 257
++ T IIF+NQ++
Sbjct: 183 KTKTSIIFINQIR 195
>gi|338930791|emb|CBX55463.1| recombinase A [Bradyrhizobium sp. UPP332]
Length = 186
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 133/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGR+V
Sbjct: 2 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGVGGLPKGRVV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|261368036|ref|ZP_05980919.1| protein RecA [Subdoligranulum variabile DSM 15176]
gi|282570024|gb|EFB75559.1| RecA protein [Subdoligranulum variabile DSM 15176]
Length = 392
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 143/204 (70%), Gaps = 1/204 (0%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D P K AL AL+Q+ FGK +++ L + + I TGSL LDLALG
Sbjct: 6 DTTPKSSGPATDKKAALETALAQIEKQFGKGAVMKLGANV-TMQVDAIPTGSLGLDLALG 64
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
IGGLP+GRI+EIYG E+SGKTTLAL V+ EAQK+GG A++DVE+ALDP+ A A+G+D +
Sbjct: 65 IGGLPRGRIIEIYGPESSGKTTLALQVLAEAQKMGGEVAFIDVEHALDPAYASALGVDID 124
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
+LL++QPD+ E + + + L +SG+ID +VVDSVAA++P+ EI + + Q+R+M+
Sbjct: 125 SLLVSQPDTGEQAMEICEALVRSGAIDAVVVDSVAAMVPRAEIEGEMGDSHVGLQARLMS 184
Query: 234 QALRKIHYSLCQSHTLIIFLNQVK 257
QALRK+ + +++T+ IF+NQ++
Sbjct: 185 QALRKLTGVIGKTNTVCIFINQLR 208
>gi|169883840|gb|ACA98016.1| recombination protein A, partial [Mesorhizobium sp. CCBAU 73184]
gi|169883842|gb|ACA98017.1| recombination protein A, partial [Mesorhizobium sp. CCBAU 11166]
Length = 167
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 125/162 (77%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
R + TGSL LD+ALG+GGLP+GRI+EIYG E+SGKTTLALH + EAQK GG CA++D
Sbjct: 1 RDRTVPTGSLGLDIALGVGGLPRGRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDA 60
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI
Sbjct: 61 EHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEI 120
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 EGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 162
>gi|385652514|ref|ZP_10047067.1| recombinase A [Leucobacter chromiiresistens JG 31]
Length = 371
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 139/195 (71%), Gaps = 7/195 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGP---VISTGSLKLDLALGIGGLPKGRI 122
++ AL AL+Q+ +FGK +++ + GS+ P VI TGS+ LD+ALGIGGLP+GRI
Sbjct: 7 REKALEAALAQIDRNFGKGAVMRM----GSQDRPPVEVIPTGSVALDVALGIGGLPRGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTTL LH I AQ+ GG A++D E+ALDP A+ +G+D + LL+AQPD+
Sbjct: 63 IEIYGPESSGKTTLTLHAIANAQRAGGIAAFIDAEHALDPEYAQKLGVDIDALLVAQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SGS+D++V+DSVAAL+PK EI + + Q+R+M+QALRKI S
Sbjct: 123 GEQALEIADMLIRSGSVDLVVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGS 182
Query: 243 LCQSHTLIIFLNQVK 257
L + T IF+NQ++
Sbjct: 183 LNSTKTTAIFINQLR 197
>gi|380703518|gb|AFD96728.1| RecA, partial [Mesorhizobium gobiense]
Length = 159
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 1 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 60
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 61 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 120
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 158
>gi|158631782|gb|ABW74996.1| RecA [Mesorhizobium septentrionale]
Length = 161
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 1 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 60
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 61 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 120
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 158
>gi|354805867|gb|AER41944.1| recombination protein A [Sinorhizobium sp. ENCBTM 45]
Length = 172
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL + EAQK GG CA++D E+AL
Sbjct: 15 VSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTVAEAQKKGGICAFVDAEHAL 74
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI +
Sbjct: 75 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEM 134
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 135 GDNLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 172
>gi|298566910|gb|ADI86531.1| recombination protein A [Sinorhizobium sp. CCBAU 05631]
Length = 163
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL + EAQK GG CA++D E+AL
Sbjct: 1 VSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTVAEAQKKGGICAFVDAEHAL 60
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI +
Sbjct: 61 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEM 120
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 121 GDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 158
>gi|168216960|ref|ZP_02642585.1| recA protein [Clostridium perfringens NCTC 8239]
gi|182380878|gb|EDT78357.1| recA protein [Clostridium perfringens NCTC 8239]
Length = 352
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 142/189 (75%), Gaps = 1/189 (0%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
A+ +A+ Q+ FGK S++ L G+ + +STG L LD+ALGIGG+PKGRI+EIYG
Sbjct: 11 AIEMAMGQIEKQFGKGSVMKLGEQ-GAPQMDAVSTGCLDLDIALGIGGVPKGRIIEIYGP 69
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALHV+ EAQKLGG AY+D E+ALDP A+ +G++ ++L+++QPD+ E L
Sbjct: 70 ESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQALE 129
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG+IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +S+
Sbjct: 130 ITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINKSNC 189
Query: 249 LIIFLNQVK 257
++IF+NQ++
Sbjct: 190 VVIFINQLR 198
>gi|330807842|ref|YP_004352304.1| recombinase A [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695630|ref|ZP_17670120.1| RecA protein [Pseudomonas fluorescens Q8r1-96]
gi|327375950|gb|AEA67300.1| recombinase A [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|388009046|gb|EIK70297.1| RecA protein [Pseudomonas fluorescens Q8r1-96]
Length = 350
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDQ--DRQAIPSISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|260578890|ref|ZP_05846795.1| recombinase A [Corynebacterium jeikeium ATCC 43734]
gi|258602980|gb|EEW16252.1| recombinase A [Corynebacterium jeikeium ATCC 43734]
Length = 375
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 138/194 (71%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
+ AL LA++Q+ DFGK +++ R R P+ IS+GS+ ++ ALGIGG P+GR+V
Sbjct: 15 RSKALELAMAQIEKDFGKGAIM---RLGDDTRPPIQAISSGSIAINAALGIGGFPRGRVV 71
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG A++D E+ALDP A A+G+D + LL++QPD+
Sbjct: 72 EIYGPESSGKTTVALHAIAEAQRAGGIAAFVDAEHALDPEYARALGVDTDALLVSQPDTG 131
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG+ID+IVVDSVAAL PK EI + + Q+R+M+QALRK+ +L
Sbjct: 132 EQALEIADMLIRSGAIDIIVVDSVAALTPKAEIDGDMGDSHVGLQARLMSQALRKMTGAL 191
Query: 244 CQSHTLIIFLNQVK 257
Q+ T IF+NQ++
Sbjct: 192 YQTGTTAIFINQLR 205
>gi|25005288|emb|CAD44252.1| RecA protein [Ensifer adhaerens]
gi|25005290|emb|CAD44253.1| RecA protein [Ensifer adhaerens]
gi|25005292|emb|CAD44254.1| RecA protein [Ensifer adhaerens]
Length = 183
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 129/182 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGGKDSIIEIETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDNLPGMQARLMSQALRKLTASISK 180
Query: 246 SH 247
S+
Sbjct: 181 SN 182
>gi|392402787|ref|YP_006439399.1| Protein recA [Turneriella parva DSM 21527]
gi|390610741|gb|AFM11893.1| Protein recA [Turneriella parva DSM 21527]
Length = 381
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
AL Q+ FGK +++ L R PVISTG+L LDLALG+GG+P+GRI+EIYG E+SG
Sbjct: 38 ALVQIEKQFGKGAVMKLN-ADAMREIPVISTGALSLDLALGVGGVPRGRIIEIYGPESSG 96
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTL LH++ EAQKLGG A++D E+ALDPS A +G++ + LL++QPD+ E L + +
Sbjct: 97 KTTLTLHIVAEAQKLGGMAAFIDAEHALDPSYARRLGVNIDELLVSQPDNGEQALEIAEA 156
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +S ++DVIV+DSVAAL+PK EI + Q+R+M+QALRK+ ++ +++T++IF
Sbjct: 157 LVRSNALDVIVIDSVAALVPKSEIEGDMGQATMGVQARLMSQALRKLTGAIHKTNTVVIF 216
Query: 253 LNQVKV 258
+NQ+++
Sbjct: 217 INQIRM 222
>gi|158147273|gb|ABW22690.1| recA [Rhizobium etli]
Length = 159
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 123/158 (77%)
Query: 100 VISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENA 159
ISTGSL LD+ALG+GGLPKGRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+A
Sbjct: 2 TISTGSLGLDIALGVGGLPKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHA 61
Query: 160 LDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVP 219
LDP A +G+D +NLLI+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI
Sbjct: 62 LDPVYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGE 121
Query: 220 INGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
+ Q+R+M+QALRK+ S+ +S+T++IF+NQ++
Sbjct: 122 MGDSLPGLQARLMSQALRKLTASISKSNTMVIFINQIR 159
>gi|157827740|ref|YP_001496804.1| recombinase A [Rickettsia bellii OSU 85-389]
gi|166220672|sp|A8GY17.1|RECA_RICB8 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157803044|gb|ABV79767.1| recombinase A [Rickettsia bellii OSU 85-389]
Length = 343
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 144/198 (72%), Gaps = 7/198 (3%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKG 120
+ K+ A+ AL+Q+ +GK S++ L G R +STGSL LD+ALGIGG+PKG
Sbjct: 4 IDKEKAVAAALAQIEKSYGKGSVMKL----GQRPNVDIESVSTGSLGLDIALGIGGVPKG 59
Query: 121 RIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQP 180
RI+EI+G E+SGKTTL LH+I EAQK GG CA++D E+ALDP+ A+ +G++ + L+I+QP
Sbjct: 60 RIIEIFGPESSGKTTLTLHLIAEAQKKGGTCAFIDAEHALDPAYAKKLGVNIDELIISQP 119
Query: 181 DSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIH 240
D+ E L + DTL +SG ID+I++DSVAAL+PK EI + +Q+R+M+QALRK+
Sbjct: 120 DTGEQALEIADTLIRSGGIDMIIIDSVAALVPKSEIEGEMGDAQMASQARLMSQALRKLT 179
Query: 241 YSLCQSHTLIIFLNQVKV 258
S+ +++ + +F+NQ+++
Sbjct: 180 ASINRTNCITVFINQIRM 197
>gi|397172861|emb|CCC58476.1| recombinase A, partial [Bradyrhizobium sp. ARR375]
Length = 186
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 132/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGRIV
Sbjct: 2 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDIALGVGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|298566894|gb|ADI86523.1| recombination protein A [Sinorhizobium sp. CCBAU 05672]
Length = 160
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL + EAQK GG CA++D E+AL
Sbjct: 1 VSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTVAEAQKKGGICAFVDAEHAL 60
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI +
Sbjct: 61 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEM 120
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 121 GDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 158
>gi|18310655|ref|NP_562589.1| recombinase A [Clostridium perfringens str. 13]
gi|110799772|ref|YP_696360.1| recombinase A [Clostridium perfringens ATCC 13124]
gi|168211439|ref|ZP_02637064.1| recA protein [Clostridium perfringens B str. ATCC 3626]
gi|168214494|ref|ZP_02640119.1| recA protein [Clostridium perfringens CPE str. F4969]
gi|422874594|ref|ZP_16921079.1| recombinase A [Clostridium perfringens F262]
gi|3219851|sp|P94666.1|RECA_CLOPE RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123148691|sp|Q0TPT0.1|RECA_CLOP1 RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|1698591|gb|AAC45139.1| RecA protein [Clostridium perfringens]
gi|18145336|dbj|BAB81379.1| recA protein [Clostridium perfringens str. 13]
gi|110674419|gb|ABG83406.1| recA protein [Clostridium perfringens ATCC 13124]
gi|170710594|gb|EDT22776.1| recA protein [Clostridium perfringens B str. ATCC 3626]
gi|170714025|gb|EDT26207.1| recA protein [Clostridium perfringens CPE str. F4969]
gi|380304235|gb|EIA16524.1| recombinase A [Clostridium perfringens F262]
Length = 352
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 142/189 (75%), Gaps = 1/189 (0%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
A+ +A+ Q+ FGK S++ L G+ + +STG L LD+ALGIGG+PKGRI+EIYG
Sbjct: 11 AIEMAMGQIEKQFGKGSVMKLGEQ-GAPQMDAVSTGCLDLDIALGIGGVPKGRIIEIYGP 69
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALHV+ EAQKLGG AY+D E+ALDP A+ +G++ ++L+++QPD+ E L
Sbjct: 70 ESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQALE 129
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG+IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +S+
Sbjct: 130 ITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINKSNC 189
Query: 249 LIIFLNQVK 257
++IF+NQ++
Sbjct: 190 VVIFINQLR 198
>gi|423097009|ref|ZP_17084805.1| RecA protein [Pseudomonas fluorescens Q2-87]
gi|397884783|gb|EJL01266.1| RecA protein [Pseudomonas fluorescens Q2-87]
Length = 350
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 139/194 (71%), Gaps = 3/194 (1%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG-PVISTGSLKLDLALGIGGLPKGRIVE 124
K AL AL Q+ FGK +++ + R+ P ISTGSL LD+ALGIGGLPKGRIVE
Sbjct: 5 KKKALAAALGQIERQFGKGAVMRMGDQ--DRQAIPSISTGSLGLDIALGIGGLPKGRIVE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
IYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+ E
Sbjct: 63 IYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182
Query: 245 QSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 183 NANCLVIFINQIRM 196
>gi|420236829|ref|ZP_14741306.1| recombinase A [Parascardovia denticolens IPLA 20019]
gi|391879932|gb|EIT88432.1| recombinase A [Parascardovia denticolens IPLA 20019]
Length = 373
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 140/200 (70%), Gaps = 7/200 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGL 117
A+ ++ AL AL+Q+ FGK S + L G + VI TGSL LDLALGIGGL
Sbjct: 10 AQDARRQAALDTALAQVEKTFGKGSAMRL----GDKPVQHVEVIPTGSLALDLALGIGGL 65
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRIVEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A +G+D ++L+I
Sbjct: 66 PRGRIVEIYGPESSGKTTIALHAVANAQKAGGVAAFIDAEHALDPEYARKLGVDTDSLII 125
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALR
Sbjct: 126 SQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALR 185
Query: 238 KIHYSLCQSHTLIIFLNQVK 257
K+ +L QS+T IF+NQ++
Sbjct: 186 KMTGALSQSNTTAIFINQLR 205
>gi|322510291|gb|ADX05531.1| recombination protein A [Sinorhizobium sp. CCBAU 05696]
Length = 165
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL + EAQK GG CA++D E+AL
Sbjct: 7 VSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTVAEAQKKGGICAFVDAEHAL 66
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI +
Sbjct: 67 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEM 126
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 127 GDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 164
>gi|308187886|ref|YP_003932017.1| protein recA (Recombinase A) [Pantoea vagans C9-1]
gi|308058396|gb|ADO10568.1| Protein recA (Recombinase A) [Pantoea vagans C9-1]
Length = 356
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 135/197 (68%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K AL AL Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKQKALAAALGQIEKQFGKGSIMRL----GEDRSMDVETISTGSLSLDIALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D ENLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLQVIASAQRKGKTCAFIDAEHALDPVYAKKLGVDIENLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVKV 258
+L QS+TL+IF+NQ+++
Sbjct: 182 NLKQSNTLLIFINQIRM 198
>gi|294790979|ref|ZP_06756137.1| protein RecA [Scardovia inopinata F0304]
gi|294458876|gb|EFG27229.1| protein RecA [Scardovia inopinata F0304]
Length = 368
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 140/200 (70%), Gaps = 7/200 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGL 117
A+ Q+ AL AL+Q+ FGK S + L G + VI TGSL LD+ALGIGGL
Sbjct: 10 AQDAQRQAALNTALAQVEKAFGKGSAMRL----GDKPVTHVEVIPTGSLALDMALGIGGL 65
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRIVEI+G E+SGKTT+ALH + AQ+ GG A++D E+ALDP A +G+D ++L+I
Sbjct: 66 PRGRIVEIFGPESSGKTTIALHAVANAQRNGGVAAFIDAEHALDPEYARNLGVDTDSLII 125
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALR
Sbjct: 126 SQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDNHVGLQARLMSQALR 185
Query: 238 KIHYSLCQSHTLIIFLNQVK 257
K+ +L QSHT +F+NQ++
Sbjct: 186 KMTGALSQSHTTAVFINQLR 205
>gi|195928116|gb|ACG55714.1| recombination protein A, partial [Bradyrhizobium sp. ORS 339]
gi|195928144|gb|ACG55728.1| recombination protein A, partial [Bradyrhizobium sp. ORS 389]
gi|195928270|gb|ACG55791.1| recombination protein A, partial [Bradyrhizobium sp. STM 4522]
Length = 181
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 132/179 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + S +STGSL LD+ALGIGGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDIALGIGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTVAEAQKKGGICAFIDAEHALDPIYARKLGVNIDELLISQPDTGEQALEICDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLII 251
L +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T++I
Sbjct: 123 LVRSGAVDVMVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINKSNTMVI 181
>gi|158631774|gb|ABW74992.1| RecA [Mesorhizobium gobiense]
Length = 167
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 5 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 64
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 65 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 124
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 125 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 162
>gi|81294642|emb|CAI71762.1| recombinase A [Bradyrhizobium sp. WSM1704]
gi|397172859|emb|CCC58475.1| recombinase A, partial [Bradyrhizobium sp. ARR341]
gi|397172867|emb|CCC58479.1| recombinase A, partial [Bradyrhizobium sp. ARR410]
gi|397172879|emb|CCC58485.1| recombinase A, partial [Bradyrhizobium sp. ARR551]
gi|397172881|emb|CCC58486.1| recombinase A, partial [Bradyrhizobium sp. ARR560]
gi|397172899|emb|CCC58495.1| recombinase A, partial [Bradyrhizobium sp. ARR696]
Length = 186
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 132/185 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALG+GGLPKGRIV
Sbjct: 2 MDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDIALGVGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + E QK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 62 EIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+V+DSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 122 EQALEIADTLVRSGAVDVLVIDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 181
Query: 244 CQSHT 248
+S+T
Sbjct: 182 NKSNT 186
>gi|325290320|ref|YP_004266501.1| recombinase A [Syntrophobotulus glycolicus DSM 8271]
gi|324965721|gb|ADY56500.1| RecA protein [Syntrophobotulus glycolicus DSM 8271]
Length = 348
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 138/192 (71%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL +AL Q+ FGK +++ L VISTG+L LD+ALG GG+P+GR+VEI
Sbjct: 6 KLKALDIALGQIEKQFGKGAVMRLGEASTKMAIEVISTGALALDVALGAGGVPRGRVVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ALHVI EAQK GG A++D E+ALDP A+A+G++ + LLI+QPD+ E
Sbjct: 66 YGPESSGKTTVALHVIAEAQKAGGVAAFIDAEHALDPEYAKALGVNTDELLISQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + + L +SG+IDV+V+DSVAAL+P+ EI + + +R+M+QALRK+ ++ +
Sbjct: 126 ALEICEALVRSGAIDVVVIDSVAALVPRAEIEGEMGDSHVGLHARLMSQALRKLTGAISK 185
Query: 246 SHTLIIFLNQVK 257
S T ++F+NQ++
Sbjct: 186 SRTCVVFINQIR 197
>gi|157961023|ref|YP_001501057.1| recombinase A [Shewanella pealeana ATCC 700345]
gi|189039609|sp|A8H1T5.1|RECA_SHEPA RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|157846023|gb|ABV86522.1| recA protein [Shewanella pealeana ATCC 700345]
Length = 355
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 136/196 (69%), Gaps = 7/196 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGRI 122
K+ AL L Q+ FGK S++ L G R ISTGSL LD+ALG GGLP GRI
Sbjct: 7 KEKALNAVLGQIEKQFGKGSIMKL----GEDRSMDVETISTGSLALDVALGAGGLPMGRI 62
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL L VI AQK G CA++D E+ALDP A+ +G+D +NLL +QPD+
Sbjct: 63 VEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D LT+SG++DVIVVDSVAAL PK EI I + +R+M+QA+RK+ +
Sbjct: 123 GEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
Query: 243 LCQSHTLIIFLNQVKV 258
L QS+TL+IF+NQ+++
Sbjct: 183 LKQSNTLLIFINQIRM 198
>gi|110801858|ref|YP_698960.1| recombinase A [Clostridium perfringens SM101]
gi|123047323|sp|Q0SSE7.1|RECA_CLOPS RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|110682359|gb|ABG85729.1| recA protein [Clostridium perfringens SM101]
Length = 352
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 142/189 (75%), Gaps = 1/189 (0%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
A+ +A+ Q+ FGK S++ L G+ + +STG L LD+ALGIGG+PKGRI+EIYG
Sbjct: 11 AIEMAMGQIEKQFGKGSVMKLGEQ-GAPQMDAVSTGCLDLDIALGIGGVPKGRIIEIYGP 69
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALHV+ EAQKLGG AY+D E+ALDP A+ +G++ ++L+++QPD+ E L
Sbjct: 70 ESSGKTTVALHVVAEAQKLGGAAAYIDAEHALDPVYAKRLGVNIDDLVVSQPDTGEQALE 129
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG+IDV+VVDSVAAL+P+ EI + + Q+R+M+QALRK+ ++ +S+
Sbjct: 130 ITEALVRSGAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINKSNC 189
Query: 249 LIIFLNQVK 257
++IF+NQ++
Sbjct: 190 VVIFINQLR 198
>gi|195928202|gb|ACG55757.1| recombination protein A, partial [Bradyrhizobium sp. STM 3843]
gi|195928204|gb|ACG55758.1| recombination protein A, partial [Bradyrhizobium sp. STM 3844]
gi|195928206|gb|ACG55759.1| recombination protein A, partial [Bradyrhizobium sp. STM 3846]
Length = 181
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 132/179 (73%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + S ISTGSL LD+ALG+GGLPKGRIVEIYG E+SG
Sbjct: 3 ALSQIERQFGKGSVMKLGKNDRSMDIETISTGSLGLDVALGVGGLPKGRIVEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQALEICDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLII 251
L +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+ +S+T++I
Sbjct: 123 LVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQARLMSQALRKLTASINKSNTMVI 181
>gi|158631768|gb|ABW74989.1| RecA [Mesorhizobium gobiense]
gi|380703504|gb|AFD96721.1| RecA, partial [Mesorhizobium sp. CCBAU 01602]
gi|380703526|gb|AFD96732.1| RecA, partial [Mesorhizobium temperatum]
gi|380703536|gb|AFD96737.1| RecA, partial [Mesorhizobium sp. CCBAU 01557]
gi|380703538|gb|AFD96738.1| RecA, partial [Mesorhizobium sp. CCBAU 01570]
gi|380703542|gb|AFD96740.1| RecA, partial [Mesorhizobium temperatum]
Length = 161
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 1 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 60
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 61 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 120
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 158
>gi|149924950|ref|ZP_01913278.1| recombinase A [Plesiocystis pacifica SIR-1]
gi|149814175|gb|EDM73790.1| recombinase A [Plesiocystis pacifica SIR-1]
Length = 378
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 136/195 (69%), Gaps = 2/195 (1%)
Query: 65 QKDNALRLALSQLANDFGKESM--LSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRI 122
Q+ A+ LAL+ + FGK S+ LS S+ PV+ TG L LD+ALGIGGLP+GRI
Sbjct: 13 QRSAAIDLALATIEKQFGKGSIMRLSADGKLPSQDVPVVPTGCLGLDIALGIGGLPRGRI 72
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
VEIYG E+SGKTTL LH + EAQ+ GG CA++D E+ALD A +G+ E+LLI+QPD
Sbjct: 73 VEIYGPESSGKTTLTLHAVAEAQRQGGVCAFIDAEHALDVGYARKIGVKTEDLLISQPDY 132
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + D L +SG+IDVIVVDSVAAL PK E+ + + Q+R+M+QALRK+ S
Sbjct: 133 GEQALEICDMLVRSGAIDVIVVDSVAALTPKAELEGEMGDSHVGLQARLMSQALRKLTGS 192
Query: 243 LCQSHTLIIFLNQVK 257
+ + TL+IF+NQ++
Sbjct: 193 VSRGRTLVIFINQLR 207
>gi|297523479|emb|CBH31147.1| recombination protein A [Mesorhizobium sp. LKU6]
gi|297523481|emb|CBH31148.1| recombination protein A [Mesorhizobium sp. LAR5]
Length = 183
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 131/181 (72%)
Query: 73 ALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASG 132
ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GRI+EIYG E+SG
Sbjct: 3 ALSQIERAFGKGSIMRLGANEKIVEIETVPTGSLGLDIALGVGGLPRGRIIEIYGPESSG 62
Query: 133 KTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDT 192
KTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DT
Sbjct: 63 KTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDT 122
Query: 193 LTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIF 252
L +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +S+T++IF
Sbjct: 123 LVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISRSNTMVIF 182
Query: 253 L 253
+
Sbjct: 183 I 183
>gi|325983480|ref|YP_004295882.1| recA protein [Nitrosomonas sp. AL212]
gi|325532999|gb|ADZ27720.1| recA protein [Nitrosomonas sp. AL212]
Length = 344
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 143/197 (72%), Gaps = 8/197 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
+ AL +AL+Q+ FGK S++ L + V+STGSL LD+ALG+GGLP+GRIVEI
Sbjct: 5 RSKALDVALAQIEKQFGKGSIMRLGANDVAYDIQVVSTGSLGLDIALGVGGLPRGRIVEI 64
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L VI E QK+GG A++D E+ALDP A+ +G++ + LLI+QPD+ E
Sbjct: 65 YGPESSGKTTLTLQVIAEMQKVGGTAAFIDAEHALDPQYAQKIGVNVKELLISQPDNGEQ 124
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEI----GVPINGMYSDAQSRIMTQALRKIHY 241
L + D L +SGS+D+IV+DSVAAL P+ EI G P G+ Q+R+M+QALRK+
Sbjct: 125 ALEIADMLVRSGSVDIIVIDSVAALTPRAEIEGDMGDPQMGL----QARLMSQALRKLTA 180
Query: 242 SLCQSHTLIIFLNQVKV 258
++ +S+T++IF+NQ+++
Sbjct: 181 NIKRSNTMVIFINQIRM 197
>gi|150024098|gb|ABR58853.1| recombination protein A [Mesorhizobium temperatum]
Length = 171
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 8 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 67
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 68 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 127
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 128 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 165
>gi|391358436|gb|AFM43751.1| recombination protein A, partial [Mesorhizobium sp. CCBAU 41403]
gi|391358438|gb|AFM43752.1| recombination protein A, partial [Mesorhizobium sp. CCBAU 41350]
gi|391358440|gb|AFM43753.1| recombination protein A, partial [Mesorhizobium sp. CCBAU 41335]
Length = 261
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRI+EIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 18 VPTGSLGLDIALGVGGLPRGRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 77
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 78 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 137
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 138 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 175
>gi|374311000|ref|YP_005057430.1| protein recA [Granulicella mallensis MP5ACTX8]
gi|358753010|gb|AEU36400.1| Protein recA [Granulicella mallensis MP5ACTX8]
Length = 357
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 142/196 (72%), Gaps = 8/196 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRR--GP--VISTGSLKLDLALGIGGLPKGR 121
+ A+ ALSQL FGK S++ L G++ GP VISTGS+ D ALG+GG+P+GR
Sbjct: 5 RSKAIETALSQLEKQFGKGSVMRL----GAKEAIGPISVISTGSISFDAALGVGGVPRGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EI+G E+SGKTT+ L +I EAQK GG A++D E+ALDP+ A+ +G+D +NLL++QPD
Sbjct: 61 VIEIFGPESSGKTTITLQIIAEAQKNGGLAAFVDAEHALDPAYAKKLGVDTDNLLVSQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
E L +V+ L +SG+IDV+VVDSVAAL+PK E+ + + Q+R+M+QALRK+
Sbjct: 121 YGEQALEIVEALVRSGAIDVLVVDSVAALVPKAELDGEMGDSHMGLQARLMSQALRKLTG 180
Query: 242 SLCQSHTLIIFLNQVK 257
++ +S T +IF+NQV+
Sbjct: 181 TVSKSRTSLIFINQVR 196
>gi|406990642|gb|EKE10279.1| hypothetical protein ACD_16C00058G0003 [uncultured bacterium]
Length = 343
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 142/194 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K AL AL Q+ FGK S++ L + +S+GSL LD+ALGIGGLPKGRIV
Sbjct: 1 MEKKKALEAALGQIEKAFGKGSVMRLGQRDVVADVSSVSSGSLGLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NL+I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAVAEAQKAGGTCAFVDAEHALDPVYARKLGVDTDNLIISQPDAG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+V+DSVAAL+P+ E+ + + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDVLVIDSVAALVPRAELEGEMGDTHVGLQARLMSQALRKLTGSV 180
Query: 244 CQSHTLIIFLNQVK 257
+++ ++IF+NQ++
Sbjct: 181 SKTNCMVIFINQIR 194
>gi|358011907|ref|ZP_09143717.1| recombinase A [Acinetobacter sp. P8-3-8]
Length = 348
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK +++ L + +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 5 KSKALNAALSQIEKQFGKNTVMRLGDNT-VQAVEAVSTGSLTLDIALGIGGLPKGRIVEI 63
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTT+ L I + QK GG CA++D E+ALDP A +G+D +NLL++QPD E
Sbjct: 64 YGPESSGKTTMTLQAIAQCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQ 123
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG++D+IVVDSVAAL PK EI + + Q+R+M+QALRKI + +
Sbjct: 124 ALEIADMLVRSGAVDMIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKR 183
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 184 SNCMVIFINQIRM 196
>gi|110003001|emb|CAJ57787.1| recombinase A [Sinorhizobium fredii]
gi|110003003|emb|CAJ57788.1| recombinase A [Sinorhizobium fredii]
gi|110003005|emb|CAJ57789.1| recombinase A [Sinorhizobium fredii]
gi|110003009|emb|CAJ57791.1| recombinase A [Sinorhizobium xinjiangense]
gi|110003011|emb|CAJ57792.1| recombinase A [Sinorhizobium xinjiangense]
Length = 183
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 128/182 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRIVEI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSKDSVIEIETVSTGSLGLDIALGIGGLPKGRIVEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 180
Query: 246 SH 247
S+
Sbjct: 181 SN 182
>gi|353559539|gb|AER11611.1| RecA [Rhizobium sp. PL-41]
Length = 173
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 127/173 (73%), Gaps = 5/173 (2%)
Query: 90 KRFFGSR--RGP---VISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEA 144
K GS+ RG +STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL + EA
Sbjct: 1 KEHIGSKGQRGSKIETVSTGSLSLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTVAEA 60
Query: 145 QKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVV 204
QK GG CA++D E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VV
Sbjct: 61 QKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVV 120
Query: 205 DSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVK 257
DSVAAL P+ EI + Q+R+M+QALRK+ S+ +S T++IF+ Q++
Sbjct: 121 DSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKTMVIFITQIR 173
>gi|326773688|ref|ZP_08232971.1| recA protein [Actinomyces viscosus C505]
gi|326636918|gb|EGE37821.1| recA protein [Actinomyces viscosus C505]
Length = 413
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 139/199 (69%), Gaps = 5/199 (2%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLP 118
++ + AL AL+Q+ FGK S++ R R PV I TGS+ LD+ALG+GGLP
Sbjct: 5 SQTQDRSKALATALAQIDKSFGKGSVM---RLGDESRPPVSVIPTGSVALDVALGVGGLP 61
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
+GRIVE+YG E+SGKTT+ALH + AQ+ GG A++D E+ALDP A+A+G+D +NLL++
Sbjct: 62 RGRIVEVYGPESSGKTTVALHAVASAQRAGGNAAFIDAEHALDPVYAKALGVDIDNLLVS 121
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + D L +SG +D+IV+DSVAAL+PK EI + + Q+R+M+QALRK
Sbjct: 122 QPDTGEQALEITDMLVRSGGLDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRK 181
Query: 239 IHYSLCQSHTLIIFLNQVK 257
I +L + T IF+NQ++
Sbjct: 182 ITGALSSTGTTAIFINQLR 200
>gi|298566904|gb|ADI86528.1| recombination protein A [Sinorhizobium fredii]
Length = 164
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 123/158 (77%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLAL I EAQK GG C ++D E+AL
Sbjct: 4 VSTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHAL 63
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI +
Sbjct: 64 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEM 123
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 124 GDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 161
>gi|198385747|gb|ACH86217.1| RecA [Sinorhizobium meliloti]
gi|198385749|gb|ACH86218.1| RecA [Sinorhizobium meliloti]
Length = 186
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 130/186 (69%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSVDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 60
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 61 IIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPD 120
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 121 TGEQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 180
Query: 242 SLCQSH 247
S+ +S+
Sbjct: 181 SISKSN 186
>gi|169883832|gb|ACA98012.1| recombination protein A, partial [Sinorhizobium fredii]
Length = 167
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 124/162 (76%)
Query: 97 RGPVISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDV 156
R +STGSL LD+ALGIGGLPKGRIVEIYG E+SGKTTLAL I EAQK GG C ++D
Sbjct: 1 RDRTVSTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDA 60
Query: 157 ENALDPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEI 216
E+ALDP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI
Sbjct: 61 EHALDPIYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEI 120
Query: 217 GVPINGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
+ Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 121 EGEMGDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 162
>gi|403234726|ref|ZP_10913312.1| protein recA [Bacillus sp. 10403023]
Length = 346
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 138/189 (73%), Gaps = 1/189 (0%)
Query: 69 ALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIYGR 128
AL +AL Q+ FGK S++ L RR IS+GSL +D+ALG+GG P+GRI+EIYG
Sbjct: 7 ALEMALKQIEKQFGKGSIMKLGEQT-DRRISTISSGSLAVDIALGVGGYPRGRIIEIYGP 65
Query: 129 EASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENLLS 188
E+SGKTT+ALH I E QK GG A++D E+ALDP+ A+ +G++ + LL++QPD+ E L
Sbjct: 66 ESSGKTTVALHAIAEVQKTGGQAAFIDAEHALDPAYAQKLGVNIDELLLSQPDTGEQALE 125
Query: 189 VVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQSHT 248
+ + L +SG++D++VVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +S+T
Sbjct: 126 IAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGAINKSNT 185
Query: 249 LIIFLNQVK 257
+ IF+NQV+
Sbjct: 186 IAIFINQVR 194
>gi|325650568|emb|CBY89467.1| RecA protein [Rhizobium leguminosarum]
gi|325650570|emb|CBY89468.1| RecA protein [Rhizobium leguminosarum]
gi|325650574|emb|CBY89470.1| RecA protein [Rhizobium leguminosarum]
gi|325650576|emb|CBY89471.1| RecA protein [Rhizobium leguminosarum]
gi|325650578|emb|CBY89472.1| RecA protein [Rhizobium leguminosarum]
gi|325650580|emb|CBY89473.1| RecA protein [Rhizobium leguminosarum]
gi|325650582|emb|CBY89474.1| RecA protein [Rhizobium leguminosarum]
gi|325650586|emb|CBY89476.1| RecA protein [Rhizobium leguminosarum]
gi|325650588|emb|CBY89477.1| RecA protein [Rhizobium leguminosarum]
gi|325650590|emb|CBY89478.1| RecA protein [Rhizobium leguminosarum]
gi|325650596|emb|CBY89481.1| RecA protein [Rhizobium leguminosarum]
gi|325650598|emb|CBY89482.1| RecA protein [Rhizobium leguminosarum]
gi|325650600|emb|CBY89483.1| RecA protein [Rhizobium leguminosarum]
gi|325650604|emb|CBY89485.1| RecA protein [Rhizobium leguminosarum]
gi|325650606|emb|CBY89486.1| RecA protein [Rhizobium leguminosarum]
gi|325650610|emb|CBY89488.1| RecA protein [Rhizobium leguminosarum]
gi|325650612|emb|CBY89489.1| RecA protein [Rhizobium leguminosarum]
gi|325650614|emb|CBY89490.1| RecA protein [Rhizobium leguminosarum]
gi|325650616|emb|CBY89491.1| RecA protein [Rhizobium leguminosarum]
gi|325650618|emb|CBY89492.1| RecA protein [Rhizobium leguminosarum]
gi|325650620|emb|CBY89493.1| RecA protein [Rhizobium leguminosarum]
gi|325650624|emb|CBY89495.1| RecA protein [Rhizobium leguminosarum]
gi|325650626|emb|CBY89496.1| RecA protein [Rhizobium leguminosarum]
gi|325650628|emb|CBY89497.1| RecA protein [Rhizobium leguminosarum]
gi|325650630|emb|CBY89498.1| RecA protein [Rhizobium leguminosarum]
gi|325650632|emb|CBY89499.1| RecA protein [Rhizobium leguminosarum]
gi|325650636|emb|CBY89501.1| RecA protein [Rhizobium leguminosarum]
gi|325650638|emb|CBY89502.1| RecA protein [Rhizobium leguminosarum]
gi|325650640|emb|CBY89503.1| RecA protein [Rhizobium leguminosarum]
gi|325650642|emb|CBY89504.1| RecA protein [Rhizobium leguminosarum]
gi|325650644|emb|CBY89505.1| RecA protein [Rhizobium leguminosarum]
gi|325650646|emb|CBY89506.1| RecA protein [Rhizobium leguminosarum]
gi|325650648|emb|CBY89507.1| RecA protein [Rhizobium leguminosarum]
gi|325650650|emb|CBY89508.1| RecA protein [Rhizobium leguminosarum]
gi|325650652|emb|CBY89509.1| RecA protein [Rhizobium leguminosarum]
gi|325650654|emb|CBY89510.1| RecA protein [Rhizobium leguminosarum]
gi|325650656|emb|CBY89511.1| RecA protein [Rhizobium leguminosarum]
gi|325650662|emb|CBY89514.1| RecA protein [Rhizobium leguminosarum]
gi|325650666|emb|CBY89516.1| RecA protein [Rhizobium leguminosarum]
gi|325650668|emb|CBY89517.1| RecA protein [Rhizobium leguminosarum]
gi|325650670|emb|CBY89518.1| RecA protein [Rhizobium leguminosarum]
gi|325650672|emb|CBY89519.1| RecA protein [Rhizobium leguminosarum]
gi|325650674|emb|CBY89520.1| RecA protein [Rhizobium leguminosarum]
gi|325650676|emb|CBY89521.1| RecA protein [Rhizobium leguminosarum]
gi|325650678|emb|CBY89522.1| RecA protein [Rhizobium leguminosarum]
gi|325650682|emb|CBY89524.1| RecA protein [Rhizobium leguminosarum]
gi|325650684|emb|CBY89525.1| RecA protein [Rhizobium leguminosarum]
gi|325650686|emb|CBY89526.1| RecA protein [Rhizobium leguminosarum]
gi|325650688|emb|CBY89527.1| RecA protein [Rhizobium leguminosarum]
gi|325650690|emb|CBY89528.1| RecA protein [Rhizobium leguminosarum]
gi|325650692|emb|CBY89529.1| RecA protein [Rhizobium leguminosarum]
gi|325650694|emb|CBY89530.1| RecA protein [Rhizobium leguminosarum]
gi|325650696|emb|CBY89531.1| RecA protein [Rhizobium leguminosarum]
gi|325650698|emb|CBY89532.1| RecA protein [Rhizobium leguminosarum]
gi|325650700|emb|CBY89533.1| RecA protein [Rhizobium leguminosarum]
gi|325650702|emb|CBY89534.1| RecA protein [Rhizobium leguminosarum]
gi|325650706|emb|CBY89536.1| RecA protein [Rhizobium leguminosarum]
gi|325650708|emb|CBY89537.1| RecA protein [Rhizobium leguminosarum]
gi|325650710|emb|CBY89538.1| RecA protein [Rhizobium leguminosarum]
gi|325650712|emb|CBY89539.1| RecA protein [Rhizobium leguminosarum]
gi|325650714|emb|CBY89540.1| RecA protein [Rhizobium leguminosarum]
gi|325650716|emb|CBY89541.1| RecA protein [Rhizobium leguminosarum]
gi|325650718|emb|CBY89542.1| RecA protein [Rhizobium leguminosarum]
gi|325650720|emb|CBY89543.1| RecA protein [Rhizobium leguminosarum]
gi|325650722|emb|CBY89544.1| RecA protein [Rhizobium leguminosarum]
gi|325650724|emb|CBY89545.1| RecA protein [Rhizobium leguminosarum]
gi|325650726|emb|CBY89546.1| RecA protein [Rhizobium leguminosarum]
gi|325650730|emb|CBY89548.1| RecA protein [Rhizobium leguminosarum]
gi|325650732|emb|CBY89549.1| RecA protein [Rhizobium leguminosarum]
gi|325650734|emb|CBY89550.1| RecA protein [Rhizobium leguminosarum]
gi|325650736|emb|CBY89551.1| RecA protein [Rhizobium leguminosarum]
gi|325650738|emb|CBY89552.1| RecA protein [Rhizobium leguminosarum]
gi|325650740|emb|CBY89553.1| RecA protein [Rhizobium leguminosarum]
gi|325650742|emb|CBY89554.1| RecA protein [Rhizobium leguminosarum]
gi|325650744|emb|CBY89555.1| RecA protein [Rhizobium leguminosarum]
gi|325650746|emb|CBY89556.1| RecA protein [Rhizobium leguminosarum]
gi|325650748|emb|CBY89557.1| RecA protein [Rhizobium leguminosarum]
gi|325650750|emb|CBY89558.1| RecA protein [Rhizobium leguminosarum]
gi|325650752|emb|CBY89559.1| RecA protein [Rhizobium leguminosarum]
gi|325650754|emb|CBY89560.1| RecA protein [Rhizobium leguminosarum]
gi|325650758|emb|CBY89562.1| RecA protein [Rhizobium leguminosarum]
gi|325650760|emb|CBY89563.1| RecA protein [Rhizobium leguminosarum]
gi|325650762|emb|CBY89564.1| RecA protein [Rhizobium leguminosarum]
gi|325650764|emb|CBY89565.1| RecA protein [Rhizobium leguminosarum]
gi|325650766|emb|CBY89566.1| RecA protein [Rhizobium leguminosarum]
gi|325650768|emb|CBY89567.1| RecA protein [Rhizobium leguminosarum]
gi|325650770|emb|CBY89568.1| RecA protein [Rhizobium leguminosarum]
gi|325650772|emb|CBY89569.1| RecA protein [Rhizobium leguminosarum]
gi|325650774|emb|CBY89570.1| RecA protein [Rhizobium leguminosarum]
gi|325650778|emb|CBY89572.1| RecA protein [Rhizobium leguminosarum]
gi|325650782|emb|CBY89574.1| RecA protein [Rhizobium leguminosarum]
gi|325650784|emb|CBY89575.1| RecA protein [Rhizobium leguminosarum]
gi|325650786|emb|CBY89576.1| RecA protein [Rhizobium leguminosarum]
gi|325650788|emb|CBY89577.1| RecA protein [Rhizobium leguminosarum]
gi|325650790|emb|CBY89578.1| RecA protein [Rhizobium leguminosarum]
gi|325650792|emb|CBY89579.1| RecA protein [Rhizobium leguminosarum]
gi|325650794|emb|CBY89580.1| RecA protein [Rhizobium leguminosarum]
gi|325650796|emb|CBY89581.1| RecA protein [Rhizobium leguminosarum]
gi|325650798|emb|CBY89582.1| RecA protein [Rhizobium leguminosarum]
gi|325650802|emb|CBY89584.1| RecA protein [Rhizobium leguminosarum]
gi|325650804|emb|CBY89585.1| RecA protein [Rhizobium leguminosarum]
gi|325650806|emb|CBY89586.1| RecA protein [Rhizobium leguminosarum]
gi|325650808|emb|CBY89587.1| RecA protein [Rhizobium leguminosarum]
gi|325650810|emb|CBY89588.1| RecA protein [Rhizobium leguminosarum]
gi|325650812|emb|CBY89589.1| RecA protein [Rhizobium leguminosarum]
gi|325650814|emb|CBY89590.1| RecA protein [Rhizobium leguminosarum]
gi|325650820|emb|CBY89593.1| RecA protein [Rhizobium leguminosarum]
gi|325650832|emb|CBY89599.1| RecA protein [Rhizobium leguminosarum]
gi|325650834|emb|CBY89600.1| RecA protein [Rhizobium leguminosarum]
gi|325650836|emb|CBY89601.1| RecA protein [Rhizobium leguminosarum]
gi|325650840|emb|CBY89603.1| RecA protein [Rhizobium leguminosarum]
gi|325650844|emb|CBY89605.1| RecA protein [Rhizobium leguminosarum]
gi|325650850|emb|CBY89608.1| RecA protein [Rhizobium leguminosarum]
gi|325650852|emb|CBY89609.1| RecA protein [Rhizobium leguminosarum]
gi|325650854|emb|CBY89610.1| RecA protein [Rhizobium leguminosarum]
gi|325650856|emb|CBY89611.1| RecA protein [Rhizobium leguminosarum]
gi|325650858|emb|CBY89612.1| RecA protein [Rhizobium leguminosarum]
gi|325650860|emb|CBY89613.1| RecA protein [Rhizobium leguminosarum]
gi|325650866|emb|CBY89616.1| RecA protein [Rhizobium leguminosarum]
gi|325650868|emb|CBY89617.1| RecA protein [Rhizobium leguminosarum]
gi|325650870|emb|CBY89618.1| RecA protein [Rhizobium leguminosarum]
gi|325650872|emb|CBY89619.1| RecA protein [Rhizobium leguminosarum]
gi|325650874|emb|CBY89620.1| RecA protein [Rhizobium leguminosarum]
gi|325650878|emb|CBY89622.1| RecA protein [Rhizobium leguminosarum]
gi|325650882|emb|CBY89624.1| RecA protein [Rhizobium leguminosarum]
gi|325650884|emb|CBY89625.1| RecA protein [Rhizobium leguminosarum]
gi|325650886|emb|CBY89626.1| RecA protein [Rhizobium leguminosarum]
gi|325650890|emb|CBY89628.1| RecA protein [Rhizobium leguminosarum]
gi|325650892|emb|CBY89629.1| RecA protein [Rhizobium leguminosarum]
gi|325650894|emb|CBY89630.1| RecA protein [Rhizobium leguminosarum]
gi|325650912|emb|CBY89639.1| RecA protein [Rhizobium sp. R-45889=2430]
gi|325651221|emb|CBY89432.1| RecA protein [Rhizobium leguminosarum]
gi|325651223|emb|CBY89433.1| RecA protein [Rhizobium leguminosarum]
gi|325651225|emb|CBY89434.1| RecA protein [Rhizobium leguminosarum]
gi|325651227|emb|CBY89435.1| RecA protein [Rhizobium leguminosarum]
gi|325651231|emb|CBY89437.1| RecA protein [Rhizobium leguminosarum]
gi|325651233|emb|CBY89438.1| RecA protein [Rhizobium leguminosarum]
gi|325651235|emb|CBY89439.1| RecA protein [Rhizobium leguminosarum]
gi|325651237|emb|CBY89440.1| RecA protein [Rhizobium leguminosarum]
gi|325651239|emb|CBY89441.1| RecA protein [Rhizobium leguminosarum]
gi|325651241|emb|CBY89442.1| RecA protein [Rhizobium leguminosarum]
gi|325651243|emb|CBY89443.1| RecA protein [Rhizobium leguminosarum]
gi|325651245|emb|CBY89444.1| RecA protein [Rhizobium leguminosarum]
gi|325651247|emb|CBY89445.1| RecA protein [Rhizobium leguminosarum]
gi|325651251|emb|CBY89447.1| RecA protein [Rhizobium leguminosarum]
gi|325651253|emb|CBY89448.1| RecA protein [Rhizobium leguminosarum]
gi|325651255|emb|CBY89449.1| RecA protein [Rhizobium leguminosarum]
gi|325651257|emb|CBY89450.1| RecA protein [Rhizobium leguminosarum]
gi|325651259|emb|CBY89451.1| RecA protein [Rhizobium leguminosarum]
gi|325651261|emb|CBY89452.1| RecA protein [Rhizobium leguminosarum]
gi|325651263|emb|CBY89453.1| RecA protein [Rhizobium leguminosarum]
gi|325651265|emb|CBY89454.1| RecA protein [Rhizobium leguminosarum]
gi|325651267|emb|CBY89455.1| RecA protein [Rhizobium leguminosarum]
gi|325651271|emb|CBY89457.1| RecA protein [Rhizobium leguminosarum]
gi|325651277|emb|CBY89460.1| RecA protein [Rhizobium leguminosarum]
gi|325651279|emb|CBY89461.1| RecA protein [Rhizobium leguminosarum]
gi|325651281|emb|CBY89462.1| RecA protein [Rhizobium leguminosarum]
gi|325651283|emb|CBY89463.1| RecA protein [Rhizobium leguminosarum]
gi|325651285|emb|CBY89464.1| RecA protein [Rhizobium leguminosarum]
gi|325651287|emb|CBY89465.1| RecA protein [Rhizobium leguminosarum]
gi|325651289|emb|CBY89466.1| RecA protein [Rhizobium leguminosarum]
Length = 183
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 129/183 (70%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S+T
Sbjct: 181 SNT 183
>gi|322510281|gb|ADX05526.1| recombination protein A [Sinorhizobium sp. CCBAU 05637]
Length = 166
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+STGSL LD+ALGIGGLPKGRI+EIYG E+SGKTTLAL + EAQK GG CA++D E+AL
Sbjct: 7 VSTGSLGLDIALGIGGLPKGRIIEIYGPESSGKTTLALQTVAEAQKKGGICAFVDAEHAL 66
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI +
Sbjct: 67 DPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEM 126
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+ ++IF+NQ+++
Sbjct: 127 GDSLPGMQARLMSQALRKLTASISKSNCMVIFINQIRM 164
>gi|257440233|ref|ZP_05615988.1| protein RecA [Faecalibacterium prausnitzii A2-165]
gi|257197267|gb|EEU95551.1| RecA protein [Faecalibacterium prausnitzii A2-165]
Length = 400
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K +AL AL+Q+ FGK +++ L + + ISTGS+ LDLALG+GG+P+GRI+E+
Sbjct: 28 KKDALATALAQIEKQFGKGAVMKLGDN-AAMQVDAISTGSIGLDLALGVGGVPRGRIIEV 86
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALHV+ EAQK GG A++DVE+ALDP AEA+G+D NLL++QPD+ E
Sbjct: 87 YGPESSGKTTLALHVLAEAQKKGGDVAFIDVEHALDPVYAEALGVDINNLLVSQPDTGEQ 146
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
+ + + L +SG+ID IVVDSVAA++P+ EI + + Q+R+M+QA+RK+ + +
Sbjct: 147 AMEICEALVRSGAIDAIVVDSVAAMVPRAEIEGEMGDSHVGLQARLMSQAMRKLTSVIGK 206
Query: 246 SHTLIIFLNQVK 257
++T+ IF+NQ++
Sbjct: 207 TNTVCIFINQLR 218
>gi|110002995|emb|CAJ57784.1| recombinase A [Sinorhizobium kostiense]
gi|110002997|emb|CAJ57785.1| recombinase A [Sinorhizobium kostiense]
Length = 183
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 132/186 (70%), Gaps = 8/186 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL ALSQ+ FGK S++ L GS+ V +STGSL LD+ALGIGGLPKGR
Sbjct: 1 KSKALEAALSQIERAFGKGSIMKL----GSKDSVVEIETVSTGSLGLDIALGIGGLPKGR 56
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 57 IVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPD 116
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 117 TGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDNLPGMQARLMSQALRKLTA 176
Query: 242 SLCQSH 247
S+ +S+
Sbjct: 177 SISKSN 182
>gi|408420422|ref|YP_006761836.1| recombinase A RecA [Desulfobacula toluolica Tol2]
gi|405107635|emb|CCK81132.1| RecA: recombinase A [Desulfobacula toluolica Tol2]
Length = 345
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 142/197 (72%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRR---GPVISTGSLKLDLALGIGGLPKGR 121
+KD A++ A+SQ+ FGK S++ L G R PVI TGSL LD ALG+GG P+GR
Sbjct: 6 EKDKAIKTAMSQIERQFGKGSIMKL----GGRAIEAVPVIRTGSLALDKALGVGGYPRGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
++EIYG E+SGKTTLALH + +AQK GG A++D E+ALD + A+ +G+D + LLI+QPD
Sbjct: 62 VIEIYGPESSGKTTLALHAVAQAQKCGGIAAFIDAEHALDVAYAKRLGVDCDELLISQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D L +SG +D++VVDSVAAL+P+ EI + + Q+R+M+QALRK+
Sbjct: 122 TGEQALEIADMLVRSGGVDIMVVDSVAALVPRSEIEGDMGDSHMGLQARLMSQALRKLTG 181
Query: 242 SLCQSHTLIIFLNQVKV 258
++ +++T +IF+NQ+++
Sbjct: 182 TIGKTNTTLIFINQIRM 198
>gi|378949128|ref|YP_005206616.1| recombinase A [Pseudomonas fluorescens F113]
gi|359759142|gb|AEV61221.1| RecA [Pseudomonas fluorescens F113]
Length = 350
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRG--PVISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ FGK +++ R R P ISTGSL LD+ALGIGGLPKGRIV
Sbjct: 5 KKKALAAALGQIERQFGKGAVM---RMGDQDRQAIPSISTGSLGLDIALGIGGLPKGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTL L VI +AQK G CA++D E+ALDP A +G++ ++LL++QPD+
Sbjct: 62 EIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +S ++DVI+VDSVAAL+PK EI + M+ Q+R+M+QALRKI ++
Sbjct: 122 EQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
Query: 244 CQSHTLIIFLNQVKV 258
++ L+IF+NQ+++
Sbjct: 182 KNANCLVIFINQIRM 196
>gi|158631770|gb|ABW74990.1| RecA [Mesorhizobium tarimense]
Length = 164
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 124/158 (78%)
Query: 101 ISTGSLKLDLALGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENAL 160
+ TGSL LD+ALG+GGLP+GRIVEIYG E+SGKTTLALH + EAQK GG CA++D E+AL
Sbjct: 1 VPTGSLGLDIALGVGGLPRGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHAL 60
Query: 161 DPSLAEAMGIDAENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPI 220
DP A +G+D ENLLI+QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI +
Sbjct: 61 DPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEM 120
Query: 221 NGMYSDAQSRIMTQALRKIHYSLCQSHTLIIFLNQVKV 258
Q+R+M+QALRK+ S+ +S+T++IF+NQ+++
Sbjct: 121 GDSLPGLQARLMSQALRKLTASISRSNTMVIFINQIRM 158
>gi|317449032|emb|CBX31917.1| RecA protein, partial [Rhizobium tibeticum]
gi|317449034|emb|CBX31918.1| RecA protein, partial [Rhizobium tibeticum]
Length = 183
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 128/183 (69%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNESVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S T
Sbjct: 181 SKT 183
>gi|255994241|ref|ZP_05427376.1| protein RecA [Eubacterium saphenum ATCC 49989]
gi|255993909|gb|EEU03998.1| protein RecA [Eubacterium saphenum ATCC 49989]
Length = 376
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 138/193 (71%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K+ AL AL + FGK S++ L VISTG++ LD+A GIGG+P+GRIVE
Sbjct: 19 EKERALNDALDLITKQFGKGSIMRLGEGALYDEVDVISTGAISLDVATGIGGIPRGRIVE 78
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
+YG E+SGKTTL LHVI EAQK GG A++D E+ALDP A +G+D ENL+++QP + E
Sbjct: 79 VYGPESSGKTTLTLHVIAEAQKNGGRAAFIDAEHALDPEYARKLGVDVENLIVSQPSTGE 138
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
+ LS+ D L +SG+IDV+V+DSVAAL+P+ EI + + Q+R+M+QALRK+ +
Sbjct: 139 DALSICDYLVRSGAIDVVVIDSVAALVPRTEIEGEMGSAHVGLQARLMSQALRKLTGATQ 198
Query: 245 QSHTLIIFLNQVK 257
+S+T +IF+NQ++
Sbjct: 199 KSNTALIFINQLR 211
>gi|118442927|ref|YP_878196.1| recombinase A [Clostridium novyi NT]
gi|166220640|sp|A0Q0P4.1|RECA_CLONN RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|118133383|gb|ABK60427.1| recA protein [Clostridium novyi NT]
Length = 350
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVE 124
+K AL+ A++Q+ FGK S++ L ISTGSL LD+ALGIGG+P+GRI+E
Sbjct: 4 EKMKALQAAITQIEKQFGKGSVMKLGEEH-VLNVEAISTGSLSLDIALGIGGIPRGRIIE 62
Query: 125 IYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAE 184
I+G E+SGKTT+ALH+I EAQK GG A++D E+ALDP A+A+G+D +NL+++QPD+ E
Sbjct: 63 IFGPESSGKTTVALHIIAEAQKSGGTAAFIDAEHALDPVYAKALGVDIDNLIVSQPDTGE 122
Query: 185 NLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLC 244
L + + L +SG+IDVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ S+
Sbjct: 123 QALEICEALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSIN 182
Query: 245 QSHTLIIFLNQVK 257
+S IF+NQ++
Sbjct: 183 KSKCATIFINQLR 195
>gi|331269615|ref|YP_004396107.1| recA protein [Clostridium botulinum BKT015925]
gi|329126165|gb|AEB76110.1| recA protein [Clostridium botulinum BKT015925]
Length = 348
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 142/196 (72%), Gaps = 7/196 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
+K AL+ AL+Q+ FGK S++ L G + ISTGSL LD+ALGIGG+P+GR
Sbjct: 4 EKMKALQAALTQIEKQFGKGSVMKL----GEEKVLNIEAISTGSLSLDIALGIGGIPRGR 59
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EI+G E+SGKTT+ALH++ EAQK GG A++D E+ALDP A+A+G+D +NL+++QPD
Sbjct: 60 IIEIFGPESSGKTTVALHIVAEAQKAGGTAAFIDAEHALDPVYAKALGVDIDNLIVSQPD 119
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + + L +SG++D+IVVDSVAAL+PK EI + + Q+R+M+QALRK+
Sbjct: 120 TGEQALEICEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDAHVGLQARLMSQALRKLTG 179
Query: 242 SLCQSHTLIIFLNQVK 257
S+ +S IF+NQ++
Sbjct: 180 SINKSKCAAIFINQLR 195
>gi|294787000|ref|ZP_06752254.1| protein RecA [Parascardovia denticolens F0305]
gi|315226642|ref|ZP_07868430.1| recombination protein A [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|294485833|gb|EFG33467.1| protein RecA [Parascardovia denticolens F0305]
gi|315120774|gb|EFT83906.1| recombination protein A [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 373
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 140/200 (70%), Gaps = 7/200 (3%)
Query: 61 AKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGL 117
A+ ++ AL AL+Q+ FGK S + L G + VI TGSL LDLALGIGGL
Sbjct: 10 AQDARRQAALDTALAQVEKTFGKGSAMRL----GDKPVQHVEVIPTGSLALDLALGIGGL 65
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRIVEIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A +G+D ++L+I
Sbjct: 66 PRGRIVEIYGPESSGKTTIALHAVANAQKAGGVAAFIDAEHALDPEYARKLGVDTDSLII 125
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALR
Sbjct: 126 SQPDNGEQALEIADMLIRSGALDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALR 185
Query: 238 KIHYSLCQSHTLIIFLNQVK 257
K+ +L QS+T IF+NQ++
Sbjct: 186 KMTGALSQSNTTAIFINQLR 205
>gi|325650900|emb|CBY89633.1| RecA protein [Rhizobium sp. R-45761=1599]
Length = 183
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 128/183 (69%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+EI
Sbjct: 1 KSKALEAALSQIERSFGKGSIMKLGSNDSIVEIETVSTGSLSLDIALGIGGLPKGRIIEI 60
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+ E
Sbjct: 61 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 120
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 121 ALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTASISK 180
Query: 246 SHT 248
S T
Sbjct: 181 SKT 183
>gi|456064161|ref|YP_007503131.1| recA protein [beta proteobacterium CB]
gi|455441458|gb|AGG34396.1| recA protein [beta proteobacterium CB]
Length = 362
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 141/207 (68%), Gaps = 6/207 (2%)
Query: 52 EFDDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLA 111
EFD D K AL AL+Q+ FGK S++ L + V+S+GSL LD+A
Sbjct: 13 EFDGMSGD------KQKALTAALAQIEKQFGKGSIMRLGDAEIHQDIQVVSSGSLGLDIA 66
Query: 112 LGIGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGID 171
LG+GGL +GR++EIYG E+SGKTTL LH I E QK+GG CA++D E+ALD A +G+D
Sbjct: 67 LGVGGLARGRVIEIYGPESSGKTTLTLHAIAEMQKIGGTCAFIDAEHALDVQYASRLGVD 126
Query: 172 AENLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRI 231
NLLI+QPD+ E L + D L +SGSID+IV+DSVAAL+P+ EI + Q+R+
Sbjct: 127 VNNLLISQPDTGEQALEIADALVRSGSIDLIVIDSVAALVPRAEIEGDMGDSLPGLQARL 186
Query: 232 MTQALRKIHYSLCQSHTLIIFLNQVKV 258
M+QALRK+ ++ +++T +IF+NQ+++
Sbjct: 187 MSQALRKLTGAIKRTNTTVIFINQIRM 213
>gi|425735453|ref|ZP_18853767.1| recA protein [Brevibacterium casei S18]
gi|425479859|gb|EKU47031.1| recA protein [Brevibacterium casei S18]
Length = 361
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 137/194 (70%), Gaps = 5/194 (2%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV--ISTGSLKLDLALGIGGLPKGRIV 123
K AL AL Q+ ++GK +++ L R P+ I TGS+ LD+ALGIGGLP+GR+V
Sbjct: 16 KSKALDAALGQIDRNYGKGAIMRLGEGV---REPIESIPTGSVSLDIALGIGGLPRGRVV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH + AQK GG A++D E+ALDP A+ +G+D + LL++QPD+
Sbjct: 73 EIYGPESSGKTTVALHAVANAQKAGGIAAFIDAEHALDPEYAKKLGVDTDQLLVSQPDTG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + D L +SG++D+IV+DSVAAL+PK EI + + Q+R+M+QALRKI +L
Sbjct: 133 EQALEIADMLIRSGALDIIVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKITGAL 192
Query: 244 CQSHTLIIFLNQVK 257
QS T IF+NQ++
Sbjct: 193 AQSKTTAIFINQLR 206
>gi|291288669|ref|YP_003505485.1| recA protein [Denitrovibrio acetiphilus DSM 12809]
gi|290885829|gb|ADD69529.1| recA protein [Denitrovibrio acetiphilus DSM 12809]
Length = 342
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 140/195 (71%), Gaps = 7/195 (3%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSR---RGPVISTGSLKLDLALGIGGLPKGRI 122
K AL A+ ++ DFGK +++ L G + + PVI +G L LD+ALG+GG P+GRI
Sbjct: 5 KQKALDAAMGKIEKDFGKGAVMRL----GDKPVEKLPVIPSGILSLDIALGVGGFPRGRI 60
Query: 123 VEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDS 182
+EIYG E+SGKTT+ALH I EAQKLGG A++D E+ALDP A+A+G+D +NL+++QPDS
Sbjct: 61 IEIYGAESSGKTTIALHAIAEAQKLGGAAAFVDAEHALDPIYAKAIGVDTDNLIVSQPDS 120
Query: 183 AENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYS 242
E L + +TL +SG+ID+IVVDSVAAL P+ EI + + Q+R+M+QALRK+
Sbjct: 121 GEVALEITETLVRSGAIDIIVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLTSI 180
Query: 243 LCQSHTLIIFLNQVK 257
+ +S T ++F+NQ +
Sbjct: 181 VNKSKTTLVFINQTR 195
>gi|113969469|ref|YP_733262.1| recombinase A [Shewanella sp. MR-4]
gi|114046702|ref|YP_737252.1| recombinase A [Shewanella sp. MR-7]
gi|122944845|sp|Q0HXG0.1|RECA_SHESR RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|123130637|sp|Q0HL62.1|RECA_SHESM RecName: Full=Protein RecA; AltName: Full=Recombinase A
gi|113884153|gb|ABI38205.1| recA protein [Shewanella sp. MR-4]
gi|113888144|gb|ABI42195.1| recA protein [Shewanella sp. MR-7]
Length = 357
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 137/197 (69%), Gaps = 7/197 (3%)
Query: 65 QKDNALRLALSQLANDFGKESMLSLKRFFGSRRG---PVISTGSLKLDLALGIGGLPKGR 121
K+ AL LSQ+ FGK S++ L G R ISTGSL LD+ALG GGLP GR
Sbjct: 6 NKEKALAAVLSQIEKQFGKGSIMKL----GEDRSMDVETISTGSLSLDVALGAGGLPMGR 61
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTL L VI AQ+ G CA++D E+ALDP A+ +G+D +NLL +QPD
Sbjct: 62 IVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + D LT+SG++DVI+VDSVAAL PK EI I + +R+M+QA+RK+
Sbjct: 122 TGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181
Query: 242 SLCQSHTLIIFLNQVKV 258
+L QS+TL+IF+NQ+++
Sbjct: 182 NLKQSNTLLIFINQIRM 198
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,763,537,481
Number of Sequences: 23463169
Number of extensions: 148003555
Number of successful extensions: 557180
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9037
Number of HSP's successfully gapped in prelim test: 2418
Number of HSP's that attempted gapping in prelim test: 546164
Number of HSP's gapped (non-prelim): 11709
length of query: 264
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 124
effective length of database: 9,074,351,707
effective search space: 1125219611668
effective search space used: 1125219611668
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)