BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024705
(264 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RY99|RECAM_ARATH DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis
thaliana GN=At3g10140 PE=2 SV=1
Length = 389
Score = 303 bits (775), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/251 (64%), Positives = 194/251 (77%), Gaps = 2/251 (0%)
Query: 9 RFSSIAPRRFFSLFPSFSQ-NGRRDAITCIGMNIHSLSSAAEVPEFD-DEPHDDAKIMQK 66
R S +P + F F SQ NGRR + C G LSS E + + DE DD K+ +K
Sbjct: 3 RLSWASPIQRFRFFSYLSQLNGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEK 62
Query: 67 DNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEIY 126
D AL LALSQL+ DF K+S LSL+RF+ RR VISTGSL LDLALG+GGLPKGR+VE+Y
Sbjct: 63 DTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVY 122
Query: 127 GREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAENL 186
G+EASGKTTLALH+IKEAQKLGGYCAYLD ENA+DPSLAE++G++ E LLI++P SAE +
Sbjct: 123 GKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKM 182
Query: 187 LSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQS 246
L++VD LTKSGS+DVIVVDSVAAL P+CE+ P+ Y D QSRIMTQALRKIHYS+ S
Sbjct: 183 LNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYS 242
Query: 247 HTLIIFLNQVK 257
TLI+FLNQV+
Sbjct: 243 QTLIVFLNQVR 253
>sp|A5FXB8|RECA_ACICJ Protein RecA OS=Acidiphilium cryptum (strain JF-5) GN=recA PE=3
SV=1
Length = 343
Score = 217 bits (553), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 145/195 (74%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M+K+ AL AL+Q+ FGK S++ + S VISTGSL LDLALGIGGLP+GR++
Sbjct: 1 MEKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVI 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S TL+IFLNQ+++
Sbjct: 181 SRSKTLVIFLNQIRL 195
>sp|Q89I84|RECA_BRAJA Protein RecA OS=Bradyrhizobium japonicum (strain USDA 110) GN=recA
PE=3 SV=1
Length = 362
Score = 214 bits (545), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S +S+GSL LD+ALGIGGLPKGR+V
Sbjct: 14 MDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+PK E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+SHT++IF+NQ+++
Sbjct: 194 NKSHTMVIFINQIRM 208
>sp|B9JFS7|RECA_AGRRK Protein RecA OS=Agrobacterium radiobacter (strain K84 / ATCC
BAA-868) GN=recA PE=3 SV=1
Length = 361
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>sp|Q3ST50|RECA_NITWN Protein RecA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC
25391) GN=recA PE=3 SV=1
Length = 362
Score = 212 bits (539), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 144/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGRIV
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
E+YG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 74 EVYGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>sp|P24074|RECA_RHILV Protein RecA OS=Rhizobium leguminosarum bv. viciae GN=recA PE=3
SV=1
Length = 351
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 142/199 (71%), Gaps = 8/199 (4%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPK 119
M K AL ALSQ+ FGK S++ L GS V ISTGSL LD+ALG+GGLP+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKL----GSNENVVEIETISTGSLGLDIALGVGGLPR 56
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+Q
Sbjct: 57 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 116
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG +DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 117 PDTGEQALEITDTLVRSGRVDVLVVDSVAALTPRAEIEGEMGDTVPGLQARLMSQALRKL 176
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 177 TASISKSNTMVIFINQIRM 195
>sp|B0CH00|RECA_BRUSI Protein RecA OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=recA PE=3 SV=1
Length = 361
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>sp|Q1MFZ8|RECA_RHIL3 Protein RecA OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=recA PE=3 SV=1
Length = 364
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 144/201 (71%), Gaps = 8/201 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS V ISTGSL LD+ALG+GGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSNENVVEIETISTGSLGLDIALGVGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
P+GRI+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI
Sbjct: 68 PRGRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+T++IF+NQ+++
Sbjct: 188 KLTASISKSNTMVIFINQIRM 208
>sp|P65976|RECA_BRUSU Protein RecA OS=Brucella suis biovar 1 (strain 1330) GN=recA PE=3
SV=1
Length = 361
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>sp|P65975|RECA_BRUME Protein RecA OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=recA PE=3 SV=1
Length = 361
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>sp|C0RJG9|RECA_BRUMB Protein RecA OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=recA PE=3 SV=1
Length = 361
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>sp|A9M5L8|RECA_BRUC2 Protein RecA OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=recA PE=3 SV=1
Length = 361
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>sp|Q04761|RECA_BRUAB Protein RecA OS=Brucella abortus biovar 1 (strain 9-941) GN=recA
PE=3 SV=2
Length = 361
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>sp|Q2YRU7|RECA_BRUA2 Protein RecA OS=Brucella abortus (strain 2308) GN=recA PE=3 SV=1
Length = 361
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>sp|B2S648|RECA_BRUA1 Protein RecA OS=Brucella abortus (strain S19) GN=recA PE=3 SV=1
Length = 361
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 141/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L + +STGSL LD+ALG+GGLPKGRIV
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 194 SRSNCMVIFINQIRM 208
>sp|C3MD93|RECA_RHISN Protein RecA OS=Rhizobium sp. (strain NGR234) GN=recA PE=3 SV=1
Length = 361
Score = 211 bits (536), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 144/201 (71%), Gaps = 8/201 (3%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGL 117
K + K AL ALSQ+ FGK S++ L GS+ + +STGSL LD+ALGIGGL
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKL----GSKDSVIEIETVSTGSLGLDIALGIGGL 67
Query: 118 PKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLI 177
PKGRI+EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI
Sbjct: 68 PKGRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLI 127
Query: 178 AQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALR 237
+QPD+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALR
Sbjct: 128 SQPDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALR 187
Query: 238 KIHYSLCQSHTLIIFLNQVKV 258
K+ S+ +S+ ++IF+NQ+++
Sbjct: 188 KLTASISKSNCMVIFINQIRM 208
>sp|P62209|RECA_AZOL4 Protein RecA OS=Azospirillum lipoferum (strain 4B) GN=recA PE=1
SV=2
Length = 359
Score = 211 bits (536), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L VISTGSL LD+ALGIGGLPKGRIV
Sbjct: 14 MDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVISTGSLGLDIALGIGGLPKGRIV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I +AQK GG CA++D E+ALDPS A +G++ + LLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQPDAG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+ L+IF+NQ+++
Sbjct: 194 SKSNCLVIFINQIRL 208
>sp|Q1QMW2|RECA_NITHX Protein RecA OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=recA PE=3 SV=1
Length = 362
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S VIS+GSL LD+ALG+GGLPKGR+V
Sbjct: 14 MDKSKALSAALSQIERQFGKGSVMKLGKNDKSMDIEVISSGSLGLDIALGVGGLPKGRVV 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+ ++LLI+QPD
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPIYARKLGVKVDDLLISQPDHG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+++DSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 NKSNTMVIFINQIRM 208
>sp|B5ZRG2|RECA_RHILW Protein RecA OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=recA PE=3 SV=1
Length = 362
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>sp|A6X0E8|RECA_OCHA4 Protein RecA OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882
/ NCTC 12168) GN=recA PE=3 SV=1
Length = 361
Score = 210 bits (535), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 142/200 (71%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVIS-----TGSLKLDLALGIGGLP 118
+ K AL ALSQ+ FGK S++ L + PVI TGSL LD+ALG+GGLP
Sbjct: 14 VDKTKALDAALSQIERAFGKGSIMRL-----GKNAPVIEIETVPTGSLSLDIALGVGGLP 68
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRIVEIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENLLI+
Sbjct: 69 KGRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLIS 128
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK
Sbjct: 129 QPDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRK 188
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 189 LTASISRSNCMVIFINQIRM 208
>sp|B6IS93|RECA_RHOCS Protein RecA OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
GN=recA PE=3 SV=1
Length = 358
Score = 210 bits (535), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL Q+ FGK S++ L ISTGSL LD+ALGIGGLP+GRIV
Sbjct: 13 MDKQKALDAALGQIERAFGKGSIMKLGAREAMAETEAISTGSLGLDIALGIGGLPRGRIV 72
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP+ A +G+D + LLI+QPD+
Sbjct: 73 EIYGPESSGKTTLALHAIAEAQKAGGTCAFVDAEHALDPAYARKLGVDVDELLISQPDAG 132
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 133 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSI 192
Query: 244 CQSHTLIIFLNQVKV 258
+S L+IF+NQ+++
Sbjct: 193 SKSRCLVIFINQIRL 207
>sp|Q2RQH9|RECA_RHORT Protein RecA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB
8255) GN=recA PE=3 SV=1
Length = 366
Score = 210 bits (535), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 146/204 (71%), Gaps = 10/204 (4%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV-----ISTGSLKLDLALGI 114
D M K AL A+ Q+ FGK S++ L +RG V ISTGSL LD+ALGI
Sbjct: 10 DKDTMDKQKALEAAVGQIERAFGKGSIMKL-----GQRGSVVDIESISTGSLGLDIALGI 64
Query: 115 GGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAEN 174
GGLP+GRIVEIYG E+SGKTTLALHV+ EAQK GG CA++D E+A DP A +G+ ++
Sbjct: 65 GGLPRGRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDD 124
Query: 175 LLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQ 234
LL++QPD+ E L + DTL +SG+IDV+V+DSVAAL+PK E+ + + Q+R+M+Q
Sbjct: 125 LLVSQPDTGEQALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQ 184
Query: 235 ALRKIHYSLCQSHTLIIFLNQVKV 258
ALRK+ ++ +S+TLIIF+NQ+++
Sbjct: 185 ALRKLTGTVSRSNTLIIFINQIRM 208
>sp|P27865|RECA_RHIME Protein RecA OS=Rhizobium meliloti (strain 1021) GN=recA PE=3 SV=1
Length = 348
Score = 210 bits (535), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGRI+
Sbjct: 1 MDKSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 61 EIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+ID++V+DSVAAL+P+ EI + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 SKSNCMVIFINQIRM 195
>sp|A1USS3|RECA_BARBK Protein RecA OS=Bartonella bacilliformis (strain ATCC 35685 /
KC583) GN=recA PE=3 SV=1
Length = 347
Score = 210 bits (535), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 142/195 (72%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + G ISTGSL LD+ALG+GGLPKGRI+
Sbjct: 1 MDKKKALDAALSQIERSFGKGSIMRLGQKEGVVEIETISTGSLSLDIALGVGGLPKGRII 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL ++QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFVDAEHALDPIYARKLGVDLENLFVSQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI ++ Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMSDSLPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>sp|B3PPU4|RECA_RHIE6 Protein RecA OS=Rhizobium etli (strain CIAT 652) GN=recA PE=3 SV=1
Length = 362
Score = 210 bits (534), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>sp|Q11IW6|RECA_MESSB Protein RecA OS=Mesorhizobium sp. (strain BNC1) GN=recA PE=3 SV=1
Length = 360
Score = 210 bits (534), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 140/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLP+GRI+
Sbjct: 14 VDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRII 73
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD+
Sbjct: 74 EIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTG 133
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DVIVVDSVAAL P+ EI + Q+R+M+QALRK+ S+
Sbjct: 134 EQALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQARLMSQALRKLTASI 193
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 194 SRSNTMVIFINQIRM 208
>sp|Q9XBC1|RECA_RHOPA Protein RecA OS=Rhodopseudomonas palustris (strain ATCC BAA-98 /
CGA009) GN=recA PE=3 SV=3
Length = 349
Score = 210 bits (534), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + S IS+GSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD
Sbjct: 61 EIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLGVNVDDLLISQPDHG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV++VDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IF+NQ+++
Sbjct: 181 NKSNTMVIFINQIRM 195
>sp|P24543|RECA_RHIET Protein RecA OS=Rhizobium etli GN=recA PE=3 SV=2
Length = 361
Score = 210 bits (534), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L ISTGSL LD+ALG+GGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISKSNTMVIFINQIRM 208
>sp|A6U9N5|RECA_SINMW Protein RecA OS=Sinorhizobium medicae (strain WSM419) GN=recA PE=3
SV=1
Length = 361
Score = 210 bits (534), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERAFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVEIYG E+SGKTTLAL I EAQK GG C ++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL+P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+ ++IF+NQ+++
Sbjct: 192 SISKSNCMVIFINQIRM 208
>sp|C1D4J2|RECA_LARHH Protein RecA OS=Laribacter hongkongensis (strain HLHK9) GN=recA
PE=3 SV=1
Length = 354
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K AL ALSQ+ FGK S++ + + VISTGSL LD+ALG+GGLP+GR+VEI
Sbjct: 6 KQKALSAALSQIEKQFGKGSIMRMNETQVNDNLQVISTGSLGLDMALGVGGLPRGRVVEI 65
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTL L V+ EAQKLGG CAY+D ENALDP A +G+ ++LL++QPD+ E
Sbjct: 66 YGPESSGKTTLCLQVVAEAQKLGGTCAYIDAENALDPVYAGKLGVKVDDLLVSQPDTGEQ 125
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + D L +SG +DVIVVDSVAAL+PK EI + + Q+R+M+QALRK+ ++ +
Sbjct: 126 ALEICDMLVRSGGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKR 185
Query: 246 SHTLIIFLNQVKV 258
++TL+IF+NQ+++
Sbjct: 186 TNTLVIFINQIRM 198
>sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis
thaliana GN=At2g19490 PE=2 SV=2
Length = 430
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 152/204 (74%)
Query: 54 DDEPHDDAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALG 113
D + + +K+ AL+ AL Q+ + FGK S++ L R R PV STGS LD+ALG
Sbjct: 46 DGNGSSEEGMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALG 105
Query: 114 IGGLPKGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAE 173
+GGLPKGR+VEIYG EASGKTTLALHVI EAQK GG C ++D E+ALD SLA+A+G++ E
Sbjct: 106 VGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTE 165
Query: 174 NLLIAQPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMT 233
NLL++QPD E LS+VDTL +SGS+DVIVVDSVAAL+PK E+ + + Q+R+M+
Sbjct: 166 NLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMS 225
Query: 234 QALRKIHYSLCQSHTLIIFLNQVK 257
QALRK+ +SL S TL+IF+NQV+
Sbjct: 226 QALRKLSHSLSLSQTLLIFINQVR 249
>sp|B9JX56|RECA_AGRVS Protein RecA OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=recA PE=3 SV=1
Length = 362
Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KTVDKSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+V+DSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKLTG 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+ +++F+NQ+++
Sbjct: 192 SISRSNCMVVFINQIRM 208
>sp|Q98NQ6|RECA_RHILO Protein RecA OS=Rhizobium loti (strain MAFF303099) GN=recA PE=3
SV=1
Length = 365
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L + TGSL LD+ALG+GGLP+GR
Sbjct: 12 KAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPRGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G+D ENLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+T++IF+NQ+++
Sbjct: 192 SISRSNTMVIFINQIRM 208
>sp|Q08327|RECA_ACEPO Protein RecA OS=Acetobacter polyoxogenes GN=recA PE=3 SV=1
Length = 348
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL ALSQ+ FGK S++ + + + VISTGSL LD+ALGIGGLP+GRI+
Sbjct: 7 IDKSKALEGALSQIERAFGKGSIMRMGERP-TEQVDVISTGSLGLDIALGIGGLPRGRII 65
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTT+ALH I EAQ+ GG CA++D E+ALDP A +G+D +NLLI+QPD+
Sbjct: 66 EIYGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAG 125
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+ S+
Sbjct: 126 EQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSV 185
Query: 244 CQSHTLIIFLNQVKV 258
+S+T++IFLNQ+++
Sbjct: 186 SRSNTMLIFLNQIRL 200
>sp|Q2W9P9|RECA_MAGSA Protein RecA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=recA PE=3 SV=1
Length = 359
Score = 208 bits (530), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 144/199 (72%)
Query: 60 DAKIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPK 119
D M + AL A+SQ+ FGK S++ L V+STGSL LD+ALGIGG+P+
Sbjct: 10 DKDTMDRQKALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPR 69
Query: 120 GRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQ 179
GRI+E+YG E+SGKTTLALH+I EAQK GG CA++D E+ALDPS A +G++ + LLI+Q
Sbjct: 70 GRIIEVYGPESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQ 129
Query: 180 PDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKI 239
PD+ E L + DTL +SG++DV+VVDSVAAL+P+ E+ + + +R+M+QALRK+
Sbjct: 130 PDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKL 189
Query: 240 HYSLCQSHTLIIFLNQVKV 258
S+ +S T++IF+NQ+++
Sbjct: 190 TGSVSKSKTIVIFINQIRM 208
>sp|Q2K7T3|RECA_RHIEC Protein RecA OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=recA
PE=3 SV=1
Length = 362
Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 140/197 (71%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I E+QK GG CA++D E+ALDP A +G+D +NLLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+VVDSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S+ ++IF+NQ+++
Sbjct: 192 SISKSNCMVIFINQIRM 208
>sp|Q9ZIQ0|RECA_RHOVI Protein RecA OS=Rhodopseudomonas viridis GN=recA PE=3 SV=1
Length = 348
Score = 207 bits (526), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 143/195 (73%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL AL+Q+ FGK S++ L + + ISTGSL LD+ALGIGGLP+GR+V
Sbjct: 1 MDKTKALDAALTQIERAFGKGSIMRLGKSGAALEVETISTGSLGLDIALGIGGLPRGRVV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH + EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+
Sbjct: 61 EIFGPESSGKTTLALHTVAEAQKKGGVCAFIDAEHALDPLYARKLGVNLDDLLISQPDAG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG+IDV+VVDSVAAL+P+ E+ + Q+R+M+QALRK+ S+
Sbjct: 121 EQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSQPGMQARLMSQALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 SRSNCMVIFINQIRM 195
>sp|Q1AW43|RECA_RUBXD Protein RecA OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129) GN=recA PE=3 SV=1
Length = 344
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
+ K AL A+SQ+ FGK S++ + S++ ISTGSL LDLALG+GG+P+GRIV
Sbjct: 3 LDKSKALDTAVSQIERQFGKGSIMRMGDR-ASQKVASISTGSLALDLALGVGGVPRGRIV 61
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EI+G E+SGKTTLALH+I EAQ+ GG A++D E+ALDP+ AEA+G+D ENL +QPDS
Sbjct: 62 EIFGPESSGKTTLALHIIAEAQRAGGLAAFIDAEHALDPTYAEAIGVDLENLYFSQPDSG 121
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + DTL +SG++D +V+DSVAAL+P+ EI + + Q+R+M+QALRK+ SL
Sbjct: 122 EQALEIADTLVRSGALDAVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSL 181
Query: 244 CQSHTLIIFLNQVK 257
+S T IF+NQ++
Sbjct: 182 SRSGTTAIFINQLR 195
>sp|Q6FZF0|RECA_BARQU Protein RecA OS=Bartonella quintana (strain Toulouse) GN=recA PE=3
SV=1
Length = 347
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>sp|P33156|RECA_AGRT5 Protein RecA OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=recA PE=3 SV=1
Length = 363
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 139/197 (70%)
Query: 62 KIMQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGR 121
K + K AL ALSQ+ FGK S++ L +STGSL LD+ALGIGGLPKGR
Sbjct: 12 KSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEVETVSTGSLSLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
I+EIYG E+SGKTTLAL I EAQK GG CA++D E+ALDP A +G+D ++LLI+QPD
Sbjct: 72 IIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQSLLISQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++DV+V+DSVAAL P+ EI + Q+R+M+QALRK+
Sbjct: 132 TGEQALEITDTLVRSGAVDVLVIDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVKV 258
S+ +S ++IF+NQ+++
Sbjct: 192 SISKSKCMVIFINQIRM 208
>sp|A9IVY9|RECA_BART1 Protein RecA OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=recA PE=3 SV=1
Length = 347
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + + TGSL LD+ALGIGGLPKGRIV
Sbjct: 1 MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETVPTGSLSLDIALGIGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKGGGICAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>sp|Q6G2Z3|RECA_BARHE Protein RecA OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=recA PE=3 SV=1
Length = 347
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIV 123
M K AL ALSQ+ FGK S++ L + I TGSL LD+ALG+GGLPKGRIV
Sbjct: 1 MDKIKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALGVGGLPKGRIV 60
Query: 124 EIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSA 183
EIYG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G+D ENL I+QPD+
Sbjct: 61 EIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPIYARKLGVDLENLFISQPDTG 120
Query: 184 ENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSL 243
E L + +TL +SG++DV+VVDSVAAL P+ EI + Q+R+M++ALRK+ S+
Sbjct: 121 EQALEITETLVRSGAVDVLVVDSVAALTPRAEIDGEMGDALPGLQARLMSKALRKLTASI 180
Query: 244 CQSHTLIIFLNQVKV 258
+S+ ++IF+NQ+++
Sbjct: 181 FRSNCMVIFINQIRM 195
>sp|P32725|RECA_RHOS4 Protein RecA OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1
/ NCIB 8253 / DSM 158) GN=recA PE=3 SV=1
Length = 343
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 144/200 (72%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL AL+Q+ FGK S++ L PV+ STGSL LD+ALGIGGLP
Sbjct: 1 MDKAKALESALAQIERQFGKGSIMKL-----GANSPVMEIEATSTGSLGLDIALGIGGLP 55
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 56 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 115
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 116 QPDTGEQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 175
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 176 LTASIGRSNCMVIFINQIRM 195
>sp|B8IP29|RECA_METNO Protein RecA OS=Methylobacterium nodulans (strain ORS2060 / LMG
21967) GN=recA PE=3 SV=1
Length = 363
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALAQIERAFGKGSIMRLGKGDKVQEVETISTGSLGLDIALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDQQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 198 SNCMVIFINQIRM 210
>sp|A3PLJ2|RECA_RHOS1 Protein RecA OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH
2.4.9) GN=recA PE=3 SV=1
Length = 357
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 144/200 (72%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL AL+Q+ FGK S++ L PV+ STGSL LD+ALGIGGLP
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKL-----GANSPVMEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP A+ +G++ + LLI+
Sbjct: 70 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++++IVVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVNLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTASIGRSNCMVIFINQIRM 209
>sp|B0UGP0|RECA_METS4 Protein RecA OS=Methylobacterium sp. (strain 4-46) GN=recA PE=3
SV=1
Length = 363
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ AL+Q+ FGK S++ L + + ISTGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALAQIERAFGKGSIMRLGKGDKVQEVETISTGSLGLDVALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDQQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 198 SNCMVIFINQIRM 210
>sp|B1LWT6|RECA_METRJ Protein RecA OS=Methylobacterium radiotolerans (strain ATCC 27329 /
DSM 1819 / JCM 2831) GN=recA PE=3 SV=1
Length = 363
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 141/193 (73%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVISTGSLKLDLALGIGGLPKGRIVEI 125
K A+ ALSQ+ FGK S++ L + + +STGSL LD+ALG+GGLP+GR++EI
Sbjct: 18 KSKAIDAALSQIERAFGKGSIMRLGKSDKVQEVETVSTGSLGLDIALGVGGLPRGRVIEI 77
Query: 126 YGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPDSAEN 185
YG E+SGKTTLALH I EAQK GG CA++D E+ALDP A +G++ ++LLI+QPD+ E
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 186 LLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHYSLCQ 245
L + DTL +SG+IDV+VVDSVAAL P+ EI + Q+R+M+QALRK+ S+ +
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 197
Query: 246 SHTLIIFLNQVKV 258
S+ ++IF+NQ+++
Sbjct: 198 SNCMVIFINQIRM 210
>sp|Q9A9A7|RECA_CAUCR Protein RecA OS=Caulobacter crescentus (strain ATCC 19089 / CB15)
GN=recA PE=3 SV=1
Length = 356
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 142/196 (72%), Gaps = 9/196 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V +STGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEIESVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ +NLL++QPD
Sbjct: 72 IVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVK 257
S+ +++T++IF+NQ++
Sbjct: 192 SINKANTIVIFINQIR 207
>sp|B8H3I7|RECA_CAUCN Protein RecA OS=Caulobacter crescentus (strain NA1000 / CB15N)
GN=recA PE=3 SV=1
Length = 356
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 142/196 (72%), Gaps = 9/196 (4%)
Query: 66 KDNALRLALSQLANDFGKESMLSLKRFFGSRRGPV----ISTGSLKLDLALGIGGLPKGR 121
K AL AL+Q+ FGK S++ L +G V +STGSL LD+ALGIGGLPKGR
Sbjct: 17 KQRALEAALAQIDRAFGKGSVMKL-----GEKGKVEIESVSTGSLGLDIALGIGGLPKGR 71
Query: 122 IVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIAQPD 181
IVE+YG E+SGKTTLALHV+ E QK GG A++D E+ALDPS A +G++ +NLL++QPD
Sbjct: 72 IVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPD 131
Query: 182 SAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRKIHY 241
+ E L + DTL +SG++D++VVDSVAAL PK EI + Q+R+M+QALRK+
Sbjct: 132 NGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTA 191
Query: 242 SLCQSHTLIIFLNQVK 257
S+ +++T++IF+NQ++
Sbjct: 192 SINKANTIVIFINQIR 207
>sp|A4WV48|RECA_RHOS5 Protein RecA OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH
2.4.3) GN=recA PE=3 SV=1
Length = 357
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 144/200 (72%), Gaps = 10/200 (5%)
Query: 64 MQKDNALRLALSQLANDFGKESMLSLKRFFGSRRGPVI-----STGSLKLDLALGIGGLP 118
M K AL AL+Q+ FGK S++ L PV+ STGSL LD+ALGIGGLP
Sbjct: 15 MDKAKALESALAQIERQFGKGSIMKL-----GANSPVMEIEATSTGSLGLDIALGIGGLP 69
Query: 119 KGRIVEIYGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSLAEAMGIDAENLLIA 178
KGRI+EIYG E+SGKTTL LHV+ E QK GG CA++D E+ALDP+ A+ +G++ + LLI+
Sbjct: 70 KGRIIEIYGPESSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPAYAKKLGVNLDELLIS 129
Query: 179 QPDSAENLLSVVDTLTKSGSIDVIVVDSVAALIPKCEIGVPINGMYSDAQSRIMTQALRK 238
QPD+ E L +VDTL +SG++ +IVVDSVAAL PK EI + M +Q+R+M+QA+RK
Sbjct: 130 QPDTGEQALEIVDTLVRSGAVSLIVVDSVAALTPKSEIEGDMGDMQMGSQARLMSQAMRK 189
Query: 239 IHYSLCQSHTLIIFLNQVKV 258
+ S+ +S+ ++IF+NQ+++
Sbjct: 190 LTASIGRSNCMVIFINQIRM 209
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,192,670
Number of Sequences: 539616
Number of extensions: 3588831
Number of successful extensions: 14710
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 13797
Number of HSP's gapped (non-prelim): 876
length of query: 264
length of database: 191,569,459
effective HSP length: 115
effective length of query: 149
effective length of database: 129,513,619
effective search space: 19297529231
effective search space used: 19297529231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)