BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024708
(264 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545042|ref|XP_002513582.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223547490|gb|EEF48985.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 447
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/268 (80%), Positives = 227/268 (84%), Gaps = 9/268 (3%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPCTLRITYSAHTDLSVKFQSHRSRDYTNP LPVAPSAID SG +VGLDGKKLEPESN
Sbjct: 185 IGPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPVAPSAIDGSGMFTVGLDGKKLEPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLHISYSRH+DLSIKVNNDRSRDYT+P+ MVN QPSILGQQPVP VG
Sbjct: 305 GHCIYDGGFCKLHISYSRHSDLSIKVNNDRSRDYTIPNPAMVNPQPSILGQQPVPTVGPP 364
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSM-PMMGNHPYMPPGSMP--MGPGM 237
A+ Y+GAQFA P E P+M QP+A AVP SM P M NHPY P G+MP MGPGM
Sbjct: 365 AHPYSGAQFA-PHTEHPVMPQPSAGWTAAVPAGPHSMPPQMNNHPYFPSGAMPPQMGPGM 423
Query: 238 MQMHMPGQSGMQHHHGA-MPPPRPDHMQ 264
MQ MPG +G+Q GA MPP RP MQ
Sbjct: 424 MQ--MPGHTGIQ--QGAPMPPYRPGQMQ 447
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L I+YS HTDLS+K + RSRDYT P+ P+
Sbjct: 171 LDGRNIPRYLLPEHIGPCTLRITYSAHTDLSVKFQSHRSRDYTNPNLPV 219
>gi|224135279|ref|XP_002322027.1| predicted protein [Populus trichocarpa]
gi|222869023|gb|EEF06154.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/267 (75%), Positives = 217/267 (81%), Gaps = 7/267 (2%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPCTLRI YS HTDLSVKFQSHRSRDYTNP LPVA SAIDA+G S+GLDGKKLEPESN
Sbjct: 185 LGPCTLRIAYSGHTDLSVKFQSHRSRDYTNPNLPVAQSAIDANGMFSMGLDGKKLEPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFS+FGPVQKIAMFDKN GLQALIQYPDVQTAVVAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNSGLQALIQYPDVQTAVVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLH+SYSRH DLSIKVNNDRSRDYT+P+ MVN QPSILGQQPV G
Sbjct: 305 GHCIYDGGFCKLHLSYSRHNDLSIKVNNDRSRDYTIPNNVMVNPQPSILGQQPVATHGPP 364
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP-MMGNHPYMPPGSMP--MGPGM 237
++ Y GAQFA P E M+ QP++ PP SMP M N+PY+PPG+MP MG GM
Sbjct: 365 SHLYTGAQFA-PTTEHSMIPQPSSGWATGFPPVPNSMPGQMNNNPYLPPGTMPPQMGHGM 423
Query: 238 MQMHMPGQSGMQHHHGAMPPPRPDHMQ 264
MQ MP G H H AMPP RP HMQ
Sbjct: 424 MQ--MPSHGGPPHTH-AMPPYRPYHMQ 447
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K QAL+Q+ DV+TA AK A
Sbjct: 111 NVLLITIEGADARLVSIDVLHLVFSAFGFVHKITTFEKMDRFQALVQFSDVETASSAKNA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
L+G I G C L I+YS HTDLS+K + RSRDYT P+ P+ S
Sbjct: 171 LDGRNIPSYLLPEHLGPCTLRIAYSGHTDLSVKFQSHRSRDYTNPNLPVAQS 222
>gi|118488039|gb|ABK95840.1| unknown [Populus trichocarpa]
Length = 442
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/267 (76%), Positives = 218/267 (81%), Gaps = 12/267 (4%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPCTLRITYSAHTDLSVKFQSHRSRDYTN LPVAPSAIDA+G SVGLDGKKLEPESN
Sbjct: 185 LGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLEPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFS+FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLH+SYSRH+DLSIKVNNDRSRDYT+P+T M+N QPSILGQQPV G
Sbjct: 305 GHCIYDGGFCKLHLSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQPVATHGPP 364
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP-MMGNHPYMPPGSMP--MGPGM 237
A+ Y GAQ MM QP+A PP SMP M N+PY+PPG+MP MG GM
Sbjct: 365 AHTYPGAQ------HHQMMPQPSAGWATGGPPVPHSMPAQMNNNPYLPPGTMPPQMGHGM 418
Query: 238 MQMHMPGQSGMQHHHGAMPPPRPDHMQ 264
MQ MP G+ H AMPP RP HMQ
Sbjct: 419 MQ--MPNHGGLP-HAPAMPPYRPGHMQ 442
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L I+YS HTDLS+K + RSRDYT + P+
Sbjct: 171 LDGRNIPSYLLPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPV 219
>gi|356509289|ref|XP_003523383.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 433
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/242 (78%), Positives = 201/242 (83%), Gaps = 21/242 (8%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
MGPCTLRITYS H+DLSVKFQSHRSRDYTNPYLPVAPSA++ SGQ VGLDGK+LE ESN
Sbjct: 185 MGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQAMVGLDGKRLEAESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ+PD QTAVVAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQFPDTQTAVVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT+P+TP VN QPSILGQQ VPM+G
Sbjct: 305 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPAVNVQPSILGQQSVPMMGPP 364
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS--QSMPM-MGNHPYMPPGSMP--MGP 235
YNG+Q AGWG PPA+ QSMPM M N+ YMP G+MP M P
Sbjct: 365 QQPYNGSQ----------------AGWGTAPPATTVQSMPMQMHNNVYMPSGTMPQQMAP 408
Query: 236 GM 237
GM
Sbjct: 409 GM 410
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 172
L+G I G C L I+YS H+DLS+K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLPEHMGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQA 230
Query: 173 PVPMVG 178
V + G
Sbjct: 231 MVGLDG 236
>gi|359490453|ref|XP_003634092.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Vitis vinifera]
Length = 446
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/265 (72%), Positives = 218/265 (82%), Gaps = 14/265 (5%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPCTLRIT+SAHTDLSVKFQSHRSRDYTNPYLPVA SAID SGQ S+G DG+K+EPESN
Sbjct: 185 LGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFSAFGP+QKIAMFDKNGG+QALIQYPDVQTA+VAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT +P+++SQPS+LGQQPVP+ G +
Sbjct: 305 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPS 361
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMG--------NHPYMPPGSMP 232
+Q+ GAQ+A P +QP++HQP+ AGW A+ + P NHPYMPPG+MP
Sbjct: 362 THQFEGAQYA-SPSDQPVIHQPS-AGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTMP 419
Query: 233 MGPGMMQMHMPGQSGMQHHHGAMPP 257
P M M Q+G+ AMPP
Sbjct: 420 PQPVPGMMPMQTQTGLP-QSAAMPP 443
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
L+G I G C L I++S HTDLS+K + RSRDYT P P+ +S GQ
Sbjct: 171 LDGRSIPRYLLPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQ 229
>gi|147804914|emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]
Length = 755
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/267 (72%), Positives = 220/267 (82%), Gaps = 18/267 (6%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPCTLRIT+SAHTDLSVKFQSHRSRDYTNPYLPVA SAID SGQ S+G DG+K+EPESN
Sbjct: 494 LGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESN 553
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFSAFGP+QKIAMFDKNGG+QALIQYPDVQTA+VAKEALE
Sbjct: 554 VLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALE 613
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT +P+++SQPS+LGQQPVP+ G +
Sbjct: 614 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPS 670
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMG--------NHPYMPPGSMP 232
+Q+ GAQ+A P +QP++HQP+ AGW A+ + P NHPYMPPG+MP
Sbjct: 671 THQFEGAQYA-SPSDQPVIHQPS-AGWATSAAAAGAPPPPPQSMPMQQHNHPYMPPGTMP 728
Query: 233 MG--PGMMQMHMPGQSGMQHHHGAMPP 257
PGMM M Q+G+ AMPP
Sbjct: 729 PQPVPGMMPMQT--QTGLP-QSAAMPP 752
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 420 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNA 479
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
L+G I G C L I++S HTDLS+K + RSRDYT P P+ +S
Sbjct: 480 LDGRSIPRYLLPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASS 531
>gi|357463843|ref|XP_003602203.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355491251|gb|AES72454.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 828
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/259 (74%), Positives = 213/259 (82%), Gaps = 6/259 (2%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPCTL+ITYS H+DL+VKFQSHRSRDYTNPYLPVA SAI+ GQ+ +GLDGK+LE ESN
Sbjct: 509 VGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQSAIEGGGQVMIGLDGKRLEAESN 568
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFSAFGP+QKIAMFDKNGGLQALIQYPD QTAVVAKEALE
Sbjct: 569 VLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGLQALIQYPDTQTAVVAKEALE 628
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYT+P P+VN+QPSILG QPVPM
Sbjct: 629 GHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPMIPVVNTQPSILG-QPVPMTVPP 687
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWG-AVPPASQSMPM-MGNHPYMPPGSMPMGPGMM 238
A QYNG+Q+ P P M + AGWG +P +QSMP+ M N+ YMP G+MP G G M
Sbjct: 688 AQQYNGSQYT--PISDPAMIPQSQAGWGTTLPTVAQSMPLQMHNNIYMPAGNMPPGNGPM 745
Query: 239 QMHMPGQSGMQHHHGAMPP 257
QM PG MQ G MPP
Sbjct: 746 QMQ-PGNGPMQMPPGNMPP 763
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL ++E V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 435 NVLLVTVEGEDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 494
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
L+G I G C L I+YS H+DL++K + RSRDYT P P+ S
Sbjct: 495 LDGRSIPRYLLSEHVGPCTLKITYSGHSDLTVKFQSHRSRDYTNPYLPVAQS 546
>gi|356516021|ref|XP_003526695.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 432
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/241 (76%), Positives = 202/241 (83%), Gaps = 20/241 (8%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPCTLRITYS H+DLSVKFQSHRSRDYTNPYLPVAPSA++ SGQ VGLDGK+LE ESN
Sbjct: 185 VGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQAMVGLDGKRLETESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD QTAVVAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDTQTAVVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYT+P+TP+VN+QPSI GQQ V M+G +
Sbjct: 305 GHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPIVNAQPSIFGQQSVSMMGPS 364
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS-QSMPM-MGNHPYMPPGSMP--MGPG 236
+ G+Q AGWG PPA+ QSMPM M N+ YMPPG+MP M PG
Sbjct: 365 QQPFYGSQ----------------AGWGTAPPAAVQSMPMQMHNNVYMPPGTMPQQMAPG 408
Query: 237 M 237
M
Sbjct: 409 M 409
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 172
L+G I G C L I+YS H+DLS+K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLPEHVGPCTLRITYSGHSDLSVKFQSHRSRDYTNPYLPVAPSAVEGSGQA 230
Query: 173 PVPMVG 178
V + G
Sbjct: 231 MVGLDG 236
>gi|363807178|ref|NP_001242348.1| uncharacterized protein LOC100810102 [Glycine max]
gi|255645249|gb|ACU23122.1| unknown [Glycine max]
Length = 428
Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 186/241 (77%), Positives = 203/241 (84%), Gaps = 8/241 (3%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
MGPC+L+ITYS H+DLSVKFQSHRSRDYTNPYLPVA SA++ SGQ VGLDGK+LE ESN
Sbjct: 185 MGPCSLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQPMVGLDGKRLEAESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD+QTAVVAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQPSILGQQPVPMVG 178
GHCIYDGGFCKLHISYSRH+DLSIKVNNDRSRDYT+P+ P+VN+QPSILGQ PVPM G
Sbjct: 305 GHCIYDGGFCKLHISYSRHSDLSIKVNNDRSRDYTIPNVPPPVVNAQPSILGQHPVPMTG 364
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMP--MGPG 236
QYNGAQ+A EQ +M Q + AGWG P SQSM M N+PY P +P PG
Sbjct: 365 PPPQQYNGAQYA-SVTEQTLMPQ-SQAGWGTAP--SQSMLQMHNNPYTPSAMVPPQTAPG 420
Query: 237 M 237
M
Sbjct: 421 M 421
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 10/126 (7%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 111 NVLLVTIEGEDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 172
L+G I G C L I+YS H+DLS+K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLPEHMGPCSLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQ- 229
Query: 173 PVPMVG 178
PMVG
Sbjct: 230 --PMVG 233
>gi|449456492|ref|XP_004145983.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Cucumis sativus]
Length = 776
Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 199/276 (72%), Positives = 221/276 (80%), Gaps = 19/276 (6%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPC+LRITYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID SGQ +VGLDGKKLEPESN
Sbjct: 508 VGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLEPESN 567
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTL+VLHMVFSAFGPVQKIAMFDKNGG+QALIQYPDVQTAVVAKEALE
Sbjct: 568 VLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALE 627
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST-PMVNSQPSILGQQPVP---- 175
GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT+P+ PMVNSQP ++GQ P
Sbjct: 628 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQGPGQGQGQ 687
Query: 176 -----MVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS--QSMPMMGNHPYMPP 228
M+G + +QYNG Q+ P +QP + P ++GWG+ PA+ SMPM N YMP
Sbjct: 688 QPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH-NPGYMPS 746
Query: 229 GSMPMGPGMMQMHMPGQSGMQHHHGAMPPPRPDHMQ 264
G+MP GM MP SG+ H PP RPDH Q
Sbjct: 747 GTMPPQHGM----MPSPSGL--HQTPPPPYRPDHRQ 776
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 434 NVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 493
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 172
L+G I G C L I+YS HTDL++K + RSRDYT P P+ S GQ
Sbjct: 494 LDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQF 553
Query: 173 PVPMVG 178
V + G
Sbjct: 554 TVGLDG 559
>gi|356546193|ref|XP_003541515.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Glycine max]
Length = 428
Score = 362 bits (929), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 182/241 (75%), Positives = 198/241 (82%), Gaps = 8/241 (3%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPC L+ITYS H+DLSVKFQSHRSRDYTNPYLPVA SA++ SGQ VGLDGK+LE ESN
Sbjct: 185 IGPCGLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQPMVGLDGKRLEAESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQY VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD+QTAVVAKE LE
Sbjct: 245 VLLASIENMQYTVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKETLE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQPSILGQQPVPMVG 178
GHCIYDGGFCKLHISYSRHTDLSIKVNN+RSRDYT+P+ P+VN+QPSILGQ PVPM G
Sbjct: 305 GHCIYDGGFCKLHISYSRHTDLSIKVNNERSRDYTIPNVPPPVVNAQPSILGQHPVPMTG 364
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMP--MGPG 236
YNGAQ+AP + M H + AGWG PP QSM M NHPY P +P PG
Sbjct: 365 PPPQHYNGAQYAPVTEQTLMSH--SQAGWGTGPP--QSMQQMHNHPYTPSAMVPPQTTPG 420
Query: 237 M 237
M
Sbjct: 421 M 421
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 10/126 (7%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK+A
Sbjct: 111 NVLLVTIEGEDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 172
L+G I G C L I+YS H+DLS+K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLPEHIGPCGLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQ- 229
Query: 173 PVPMVG 178
PMVG
Sbjct: 230 --PMVG 233
>gi|449522938|ref|XP_004168482.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Cucumis sativus]
Length = 457
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/280 (71%), Positives = 221/280 (78%), Gaps = 23/280 (8%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ----LSVGLDGKKLE 56
+GPC+LRITYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID SGQ +VGLDGKKLE
Sbjct: 185 VGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSSLQFTVGLDGKKLE 244
Query: 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
PESNVLLASIENMQYAVTL+VLHMVFSAFGPVQKIAMFDKNGG+QALIQYPDVQTAVVAK
Sbjct: 245 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 304
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST-PMVNSQPSILGQQPVP 175
EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT+P+ PMVNSQP ++GQ P
Sbjct: 305 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQGPGQ 364
Query: 176 ---------MVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPAS--QSMPMMGNHP 224
M+G + +QYNG Q+ P +QP + P ++GWG+ PA+ SMPM N
Sbjct: 365 GQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH-NPG 423
Query: 225 YMPPGSMPMGPGMMQMHMPGQSGMQHHHGAMPPPRPDHMQ 264
YMP G+MP GM MP SG+ H PP RPDH Q
Sbjct: 424 YMPSGTMPPQHGM----MPSPSGL--HQTPPPPYRPDHRQ 457
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L I+YS HTDL++K + RSRDYT P P+
Sbjct: 171 LDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPV 219
>gi|224118178|ref|XP_002317750.1| predicted protein [Populus trichocarpa]
gi|222858423|gb|EEE95970.1| predicted protein [Populus trichocarpa]
Length = 350
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/174 (91%), Positives = 168/174 (96%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPCTLRITYSAHTDLSVKFQSHRSRDYTN LPVAPSAIDA+G SVGLDGKKLEPESN
Sbjct: 176 LGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPVAPSAIDANGMFSVGLDGKKLEPESN 235
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFS+FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE
Sbjct: 236 VLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 295
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 174
GHCIYDGGFCKLH+SYSRH+DLSIKVNNDRSRDYT+P+T M+N QPSILGQQPV
Sbjct: 296 GHCIYDGGFCKLHLSYSRHSDLSIKVNNDRSRDYTIPNTVMMNPQPSILGQQPV 349
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 102 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNA 161
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L I+YS HTDLS+K + RSRDYT + P+
Sbjct: 162 LDGRNIPSYLLPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNANLPV 210
>gi|302143674|emb|CBI22535.3| unnamed protein product [Vitis vinifera]
Length = 1311
Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 157/183 (85%), Positives = 173/183 (94%), Gaps = 3/183 (1%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPCTLRIT+SAHTDLSVKFQSHRSRDYTNPYLPVA SAID SGQ S+G DG+K+EPESN
Sbjct: 185 LGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQFSMGFDGRKVEPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVFSAFGP+QKIAMFDKNGG+QALIQYPDVQTA+VAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFSAFGPIQKIAMFDKNGGVQALIQYPDVQTAIVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT +P+++SQPS+LGQQPVP+ G +
Sbjct: 305 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---SPVLSSQPSVLGQQPVPIPGPS 361
Query: 181 ANQ 183
+Q
Sbjct: 362 THQ 364
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGADARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETASAAKNA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
L+G I G C L I++S HTDLS+K + RSRDYT P P+ +S GQ
Sbjct: 171 LDGRSIPRYLLPEHLGPCTLRITFSAHTDLSVKFQSHRSRDYTNPYLPVASSAIDGSGQ 229
>gi|164519910|gb|ABY59992.1| polypyrimidine tract-binding protein-like protein [Robinia
pseudoacacia]
Length = 240
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 192/237 (81%), Gaps = 9/237 (3%)
Query: 25 SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 84
SRDYTNPYLPVA SA++ SGQ+ VGLDGK+LE ESNVLLASIENMQYAVTLDVLHMVFSA
Sbjct: 2 SRDYTNPYLPVAQSAVEGSGQVMVGLDGKRLETESNVLLASIENMQYAVTLDVLHMVFSA 61
Query: 85 FGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
FGPVQKIAMFDKNGGLQALIQYPD+QTAVVAKEALEGHCIYDGGFCK HISYSRHTDLSI
Sbjct: 62 FGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALEGHCIYDGGFCKPHISYSRHTDLSI 121
Query: 145 KVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTA 204
KVNNDRSRDYT+P+TP+VN+QPSI GQ VPM+G A QYNG+Q+ P E +M Q A
Sbjct: 122 KVNNDRSRDYTIPNTPVVNAQPSISGQHAVPMMGPPAQQYNGSQYT-PISEAALMPQSQA 180
Query: 205 AGWGA-VPPASQSM-PMMGNHPYMPPGSMP--MGPGMMQMHMPGQSGMQHHHGAMPP 257
GWG +P +QSM P M N+ YMPPG++P M PG M P S M H +PP
Sbjct: 181 GGWGTPLPAVAQSMPPQMHNNMYMPPGTLPQQMAPG---MQFPSHS-MPQHASTLPP 233
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDG 52
G C I+YS HTDLS+K + RSRDYT P PV + SGQ +V + G
Sbjct: 105 GFCKPHISYSRHTDLSIKVNNDRSRDYTIPNTPVVNAQPSISGQHAVPMMG 155
>gi|297796143|ref|XP_002865956.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
gi|297311791|gb|EFH42215.1| hypothetical protein ARALYDRAFT_495390 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/161 (87%), Positives = 157/161 (97%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C+L+ITYSAHTDL+VKFQSHRSRDYTNPYLP+APSAID++GQ++VG+DGKK+EPESN
Sbjct: 185 VGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPIAPSAIDSTGQVAVGVDGKKMEPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVF+AFG VQKIAMFDKNGGLQALIQY DVQTAVVAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFAAFGDVQKIAMFDKNGGLQALIQYKDVQTAVVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
GHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT+P+ P+
Sbjct: 305 GHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPV 345
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL ++E V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTVEGEDARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFSDEETATSAKNA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 172
L+G I G C L I+YS HTDL++K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLAEQVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPIAPSAIDSTGQV 230
Query: 173 PVPMVG 178
V + G
Sbjct: 231 AVGVDG 236
>gi|15238677|ref|NP_200130.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
gi|75333813|sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2
gi|9757999|dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like
[Arabidopsis thaliana]
gi|53749130|gb|AAU90050.1| At5g53180 [Arabidopsis thaliana]
gi|55733737|gb|AAV59265.1| At5g53180 [Arabidopsis thaliana]
gi|332008935|gb|AED96318.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
Length = 429
Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 139/155 (89%), Positives = 152/155 (98%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C+L+ITYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID++GQ++VG+DGKK+EPESN
Sbjct: 185 VGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKMEPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVF+AFG VQKIAMFDKNGG+QALIQY DVQTAVVAKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
GHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT
Sbjct: 305 GHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYT 339
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 60 NVLLASIE-NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE + V++DVLH+VFSAFG V KI F+K G QAL+Q+ D +TA AK A
Sbjct: 111 NVLLVTIEGDDARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLA 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 172
L+G I G C L I+YS HTDL++K + RSRDYT P P+ S GQ
Sbjct: 171 LDGRSIPRYLLAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQV 230
Query: 173 PVPMVG 178
V + G
Sbjct: 231 AVGVDG 236
>gi|145334809|ref|NP_001078750.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
gi|110737620|dbj|BAF00751.1| polypyrimidine tract-binding RNA transport protein-like
[Arabidopsis thaliana]
gi|332008936|gb|AED96319.1| polypyrimidine tract-binding protein 2 [Arabidopsis thaliana]
Length = 329
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 139/155 (89%), Positives = 152/155 (98%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C+L+ITYSAHTDL+VKFQSHRSRDYTNPYLPVAPSAID++GQ++VG+DGKK+EPESN
Sbjct: 85 VGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKMEPESN 144
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVLHMVF+AFG VQKIAMFDKNGG+QALIQY DVQTAVVAKEALE
Sbjct: 145 VLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALE 204
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
GHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT
Sbjct: 205 GHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYT 239
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 81 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLHI 134
VFSAFG V KI F+K G QAL+Q+ D +TA AK AL+G I G C L I
Sbjct: 33 VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 92
Query: 135 SYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
+YS HTDL++K + RSRDYT P P+ S GQ V + G
Sbjct: 93 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDG 136
>gi|294463038|gb|ADE77057.1| unknown [Picea sitchensis]
Length = 528
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 167/212 (78%), Gaps = 4/212 (1%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C+LRIT+SAH DL+VKFQSHRSRDYTNPYLPVAPSAID +GQ +G DGK+ EPESN
Sbjct: 185 VGLCSLRITFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGTGQFGIGPDGKRREPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVTLDVL VF+AFG VQKIA+F+KN G QALIQYPDV TAV AKEALE
Sbjct: 245 VLLASIENMQYAVTLDVLRSVFTAFGTVQKIAIFEKNAGFQALIQYPDVATAVTAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGGFCKLH+SYSRHTDL++KVNNDRSRDYT P+ ++ +Q SILGQQP T
Sbjct: 305 GHCIYDGGFCKLHLSYSRHTDLNVKVNNDRSRDYTSPNPGLLPNQLSILGQQPSAF-QTT 363
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 212
+ G Q P +++ GA+PP
Sbjct: 364 VSAVGGMQV---PQSSSLVYSGNNYAGGALPP 392
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 75/120 (62%), Gaps = 7/120 (5%)
Query: 59 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ D TA AK
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDPNTATSAKN 169
Query: 118 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
AL+G I G C L I++S H DL++K + RSRDYT P P+ S GQ
Sbjct: 170 ALDGRSIPRYLLPEHVGLCSLRITFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGTGQ 229
>gi|294461640|gb|ADE76380.1| unknown [Picea sitchensis]
Length = 511
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/173 (76%), Positives = 152/173 (87%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPC LRI++SAHTDL+VKFQSHRSRDYTNP LPVAPSAID +GQ +G DG++ EP SN
Sbjct: 185 VGPCHLRISFSAHTDLNVKFQSHRSRDYTNPNLPVAPSAIDGTGQFGIGPDGQRREPASN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KN G QALIQY D+ TAV+AKEALE
Sbjct: 245 VLLASIENMQYAVTVDVLHTVFSAFGIVQKIAMFEKNAGWQALIQYADIPTAVIAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 173
GH IY GG+CKLH+SYSRHTDL++KVNNDRSRDYTLP ++ +Q SILGQQP
Sbjct: 305 GHFIYAGGYCKLHLSYSRHTDLNVKVNNDRSRDYTLPKVGILQNQLSILGQQP 357
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 7/120 (5%)
Query: 59 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ DV TA A+
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDVDTASSARS 169
Query: 118 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
AL+G I G C L IS+S HTDL++K + RSRDYT P+ P+ S GQ
Sbjct: 170 ALDGRSIPRYLLAEHVGPCHLRISFSAHTDLNVKFQSHRSRDYTNPNLPVAPSAIDGTGQ 229
>gi|168027197|ref|XP_001766117.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682760|gb|EDQ69176.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 488
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/282 (59%), Positives = 191/282 (67%), Gaps = 42/282 (14%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPC LRI++SAH DL+VKFQSHRSRDYTNPYLPVAPSAID SGQ SVG DGK+ EPESN
Sbjct: 185 VGPCHLRISFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQFSVGPDGKRREPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLL SIENMQYAVT+DV+H VFSAFG VQKIA+F+K+ G QAL+QYPD+ TAV AKEALE
Sbjct: 245 VLLVSIENMQYAVTIDVIHTVFSAFGFVQKIAIFEKSAGFQALVQYPDIPTAVGAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIK------VNNDRSRDYT---LPST--PMVNSQPSIL 169
GHCIYDGGFCKLH+SYSRHTDL++K VNNDRSRDYT LP+T P+++ P +
Sbjct: 305 GHCIYDGGFCKLHLSYSRHTDLNVKALSLLYVNNDRSRDYTNPGLPATQPPVLSQAPGVA 364
Query: 170 GQQPVPMVGATANQYNGAQFAPPPPEQP------MMHQ----------PTAAGWGAVPPA 213
QQ G+ Q Q + P P QP M HQ P A+G PP
Sbjct: 365 QQQSWDTEGSGKAQ----QVSGPMPGQPMSGPMYMSHQHGGAVGHHGPPGASGSYQGPPG 420
Query: 214 --SQSMPMMGNHPYM-PPGSMPMGPGMMQMHMPGQSGMQHHH 252
+ PM G P M PPG MGPGM Q G Q HH
Sbjct: 421 PVTSMGPMSGPGPSMAPPGY--MGPGMHQQ------GQQSHH 454
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 75/120 (62%), Gaps = 7/120 (5%)
Query: 59 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ D TA AK
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKS 169
Query: 118 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
ALEG I G C L IS+S H DL++K + RSRDYT P P+ S GQ
Sbjct: 170 ALEGRSIPRYLLPDHVGPCHLRISFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQ 229
>gi|168060645|ref|XP_001782305.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666235|gb|EDQ52895.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/160 (80%), Positives = 144/160 (90%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GPC LRI++SAH DL+VKFQSHRSRDYTNPYLPVAPSAID SGQ SVG DGK+ EPESN
Sbjct: 185 VGPCHLRISFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQFSVGPDGKRREPESN 244
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLL SIENMQYAVT+DV+H VFSAFG VQKIA+F+K+ G QAL+QYPD+ TAV AKEALE
Sbjct: 245 VLLVSIENMQYAVTIDVIHTVFSAFGFVQKIAIFEKSAGFQALVQYPDIPTAVGAKEALE 304
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
GHCIYDGGFCKLH+SYSRHTDL++KVNNDRSRDYT P P
Sbjct: 305 GHCIYDGGFCKLHLSYSRHTDLNVKVNNDRSRDYTNPGLP 344
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 7/110 (6%)
Query: 59 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K+ G QAL+Q+ D TA AK
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQALVQFSDANTASAAKS 169
Query: 118 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
ALEG I G C L IS+S H DL++K + RSRDYT P P+
Sbjct: 170 ALEGRSIPRYLLPDHVGPCHLRISFSAHNDLNVKFQSHRSRDYTNPYLPV 219
>gi|116787007|gb|ABK24339.1| unknown [Picea sitchensis]
Length = 491
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/163 (77%), Positives = 148/163 (90%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAHTDL+VKFQSHRSRDYTNP LPV PSAID +GQ +VG DGK+ E ESNVLL
Sbjct: 188 CHLRISFSAHTDLNVKFQSHRSRDYTNPNLPVNPSAIDGAGQFTVGPDGKRRELESNVLL 247
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAVT+DVL+ VFSAFG VQKIA+F+KNGG QALIQYPD+ TAV+AKEALEGHC
Sbjct: 248 ASIENMQYAVTVDVLNTVFSAFGRVQKIAIFEKNGGFQALIQYPDIATAVLAKEALEGHC 307
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 166
IYDGG+CKLH+SYSRHTDL++K NNDRSRDYT+P++ M+ +QP
Sbjct: 308 IYDGGYCKLHLSYSRHTDLNVKGNNDRSRDYTIPASGMLPAQP 350
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 7/110 (6%)
Query: 59 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
SNVLL +IE + V++DVLH+VFSAFG V KIA F+K G QAL+Q+ D TA A+
Sbjct: 110 SNVLLVTIEGVDSGDVSIDVLHLVFSAFGFVHKIATFEKTAGFQALVQFSDADTAASARS 169
Query: 118 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
AL+G I C L IS+S HTDL++K + RSRDYT P+ P+
Sbjct: 170 ALDGRSIPRYLLPEHVASCHLRISFSAHTDLNVKFQSHRSRDYTNPNLPV 219
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+VK + RSRDYT P
Sbjct: 312 GYCKLHLSYSRHTDLNVKGNNDRSRDYTIP 341
>gi|225452859|ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
[Vitis vinifera]
gi|296082938|emb|CBI22239.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/270 (55%), Positives = 181/270 (67%), Gaps = 19/270 (7%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGKK EPESN
Sbjct: 184 VGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNGG+QALIQYPDV TA VAKEALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-------PSILGQQP 173
GHCIYDGG+CKLH+SYSRHTDL++K ++DRSRDYT+P + ++ Q + + Q P
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNP 363
Query: 174 VPMVGATANQYNGAQFAPPPPEQPMM---HQPTAAGWGAVPPASQSMPMMGNHPYMPPGS 230
T + A P P M A+ A P + + +P PPGS
Sbjct: 364 QAAPLYTGHDAAAAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFASSSISAYP-APPGS 422
Query: 231 MPMGPGMMQMHMPGQSGMQHHHGAMPPPRP 260
P+ P + PG GA PP RP
Sbjct: 423 SPLTPAVPPNVRPG--------GASPPGRP 444
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|225452861|ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
[Vitis vinifera]
Length = 420
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/270 (55%), Positives = 181/270 (67%), Gaps = 19/270 (7%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGKK EPESN
Sbjct: 155 VGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPALGPDGKKKEPESN 214
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNGG+QALIQYPDV TA VAKEALE
Sbjct: 215 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDVTTAAVAKEALE 274
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-------PSILGQQP 173
GHCIYDGG+CKLH+SYSRHTDL++K ++DRSRDYT+P + ++ Q + + Q P
Sbjct: 275 GHCIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNP 334
Query: 174 VPMVGATANQYNGAQFAPPPPEQPMM---HQPTAAGWGAVPPASQSMPMMGNHPYMPPGS 230
T + A P P M A+ A P + + +P PPGS
Sbjct: 335 QAAPLYTGHDAAAAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFASSSISAYP-APPGS 393
Query: 231 MPMGPGMMQMHMPGQSGMQHHHGAMPPPRP 260
P+ P + PG GA PP RP
Sbjct: 394 SPLTPAVPPNVRPG--------GASPPGRP 415
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 102 ALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
ALIQ+ D +TA A+ AL+G I G C L ISYS HTDL+IK + RSRDYT
Sbjct: 124 ALIQFTDAETASSARNALDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYT 183
Query: 156 LPSTPM 161
P P+
Sbjct: 184 NPYLPV 189
>gi|118488224|gb|ABK95931.1| unknown [Populus trichocarpa]
Length = 473
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/286 (54%), Positives = 182/286 (63%), Gaps = 26/286 (9%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+AI+ Q +VG DGKK EPESN
Sbjct: 184 VGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGPVQPTVGADGKKKEPESN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYPDV TA VAKE LE
Sbjct: 244 VLLASIENMQYAVTIDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKETLE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV----PM 176
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q L P P
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLIAAQAPGLHTAPTMWQNPQ 363
Query: 177 VGA--TANQYNGAQFAP---PPPEQPMMH---QPTAAGWGAVPPA--SQSMPMMGNHPY- 225
G+ T N Y P PP + P Q G+ +VP Q+ P Y
Sbjct: 364 AGSMYTGNNYATTAAVPVQVPPGQVPAWDPTMQAGGQGYASVPGTYPGQTYPTPPASAYA 423
Query: 226 ---MPPGSMPM--------GPGMMQMHMPGQSGMQHHHGAMPPPRP 260
+P GS P M M PG GA PP +P
Sbjct: 424 TAAIPAGSSPRSHSSPISHSVASMAMSHPGMQSNLRPSGASPPGQP 469
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 79/127 (62%), Gaps = 10/127 (7%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG + KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGYLHKIATFEKAAGFQALIQFTDSETASSARNA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 172
L+G I G C L ISYS HTDL+IK + RSRDYT P P+ P+ +
Sbjct: 170 LDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV---NPTAIEGP 226
Query: 173 PVPMVGA 179
P VGA
Sbjct: 227 VQPTVGA 233
>gi|224141415|ref|XP_002324068.1| predicted protein [Populus trichocarpa]
gi|222867070|gb|EEF04201.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/165 (75%), Positives = 142/165 (86%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+AID Q +VG DGKK EPESN
Sbjct: 188 VGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIDGPVQSTVGADGKKKEPESN 247
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFS FG VQKIA+F+KNGG QALIQYPDV TA VAKE LE
Sbjct: 248 VLLASIENMQYAVTVDVLHTVFSGFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKETLE 307
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 165
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P + +Q
Sbjct: 308 GHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPDASFLTAQ 352
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 11/113 (9%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNA 169
Query: 119 LEGHCIYDGGF----------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I F C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRNIMFKKFRYLLPEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 222
>gi|302789199|ref|XP_002976368.1| hypothetical protein SELMODRAFT_104811 [Selaginella moellendorffii]
gi|302811042|ref|XP_002987211.1| hypothetical protein SELMODRAFT_125500 [Selaginella moellendorffii]
gi|300145108|gb|EFJ11787.1| hypothetical protein SELMODRAFT_125500 [Selaginella moellendorffii]
gi|300155998|gb|EFJ22628.1| hypothetical protein SELMODRAFT_104811 [Selaginella moellendorffii]
Length = 440
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/174 (72%), Positives = 149/174 (85%), Gaps = 7/174 (4%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA-SGQLSVGLDGKKLEPES 59
+G C LRI++SAHTDL+VKFQSHRSRDYTNPYLPVAPSAI+ S + + G DGK+ EPES
Sbjct: 185 VGSCHLRISFSAHTDLNVKFQSHRSRDYTNPYLPVAPSAINGISQEYTTGPDGKRKEPES 244
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
NVLLASIENMQY+VT+DVLH VF+AFGP+QKIA+F+KN G QALIQY DV TAV AKEAL
Sbjct: 245 NVLLASIENMQYSVTIDVLHTVFAAFGPIQKIAIFEKNAGFQALIQYADVTTAVAAKEAL 304
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 173
EGHCIY+GG+CKLH+SYSRHTDL++KVNNDRSRDYT + PS+LG+ P
Sbjct: 305 EGHCIYEGGYCKLHLSYSRHTDLNVKVNNDRSRDYTSSQS------PSVLGKAP 352
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 78/121 (64%), Gaps = 7/121 (5%)
Query: 59 SNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
SNVLL +IE ++ V++DVLH+VFSAFG V KIA F+K G QAL+Q+ D TA A++
Sbjct: 110 SNVLLVTIEGVEAGDVSIDVLHLVFSAFGFVHKIATFEKTAGFQALVQFSDANTASAARQ 169
Query: 118 ALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
AL+G I G C L IS+S HTDL++K + RSRDYT P P+ S + + Q
Sbjct: 170 ALDGRSIPRYLLPEHVGSCHLRISFSAHTDLNVKFQSHRSRDYTNPYLPVAPSAINGISQ 229
Query: 172 Q 172
+
Sbjct: 230 E 230
>gi|54290862|dbj|BAD61523.1| polypyrimidine tract-binding protein 1-like [Oryza sativa Japonica
Group]
gi|125571201|gb|EAZ12716.1| hypothetical protein OsJ_02633 [Oryza sativa Japonica Group]
gi|215740848|dbj|BAG97004.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/236 (61%), Positives = 170/236 (72%), Gaps = 25/236 (10%)
Query: 3 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 62
PCTLRI YSAHT L+VKFQSHRSRDYTNPYLPVAPSAID SG DGKK E ESNVL
Sbjct: 185 PCTLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGP-----DGKKQEAESNVL 239
Query: 63 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 122
LAS+ENMQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEALEGH
Sbjct: 240 LASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGH 299
Query: 123 CIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATAN 182
IY+GG+CKLH+++SRHTDL++KVNN+R RDYT +T ++QPSILG QPV
Sbjct: 300 SIYEGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPV-------- 351
Query: 183 QYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQ-SMPMMGNHPYMPPGSMPMGPGM 237
Y+GA + P++A VPP + + P +HPY +P P +
Sbjct: 352 -YSGA----------YNNAPSSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAV 396
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 74/116 (63%), Gaps = 7/116 (6%)
Query: 56 EPESNVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL S+E + AV++DVLH+VFSAFG VQKIA F+K G QALIQ+ D +TA
Sbjct: 105 EAAGNVLLVSMEGVLPDAVSIDVLHLVFSAFGFVQKIATFEKASGYQALIQFCDTETASS 164
Query: 115 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
AK AL+G CI C L I+YS HT L++K + RSRDYT P P+ S
Sbjct: 165 AKAALDGRCIPSYLLPELDVPCTLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPS 220
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYT 29
G C L +T+S HTDL+VK + R RDYT
Sbjct: 305 GYCKLHLTFSRHTDLNVKVNNERGRDYT 332
>gi|115438631|ref|NP_001043595.1| Os01g0619000 [Oryza sativa Japonica Group]
gi|54290863|dbj|BAD61524.1| polypyrimidine tract-binding protein-like [Oryza sativa Japonica
Group]
gi|113533126|dbj|BAF05509.1| Os01g0619000 [Oryza sativa Japonica Group]
gi|215697045|dbj|BAG91039.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 448
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/236 (61%), Positives = 169/236 (71%), Gaps = 25/236 (10%)
Query: 3 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 62
PCTLRI YSAHT L+VKFQSHRSRDYTNPYLPVAPSAID SG DGKK E ESNVL
Sbjct: 79 PCTLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGP-----DGKKQEAESNVL 133
Query: 63 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 122
LAS+ENMQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEALEGH
Sbjct: 134 LASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGH 193
Query: 123 CIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATAN 182
IY+GG+CKLH+++SRHTDL++KVNN+R RDYT +T ++QPSILG QPV +
Sbjct: 194 SIYEGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPV-----YSG 248
Query: 183 QYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQ-SMPMMGNHPYMPPGSMPMGPGM 237
YN A P++A VPP + + P +HPY +P P +
Sbjct: 249 AYNNA--------------PSSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAV 290
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 81 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF------CKLHI 134
VFSAFG VQKIA F+K G QALIQ+ D +TA AK AL+G CI C L I
Sbjct: 25 VFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDGRCIPSYLLPELDVPCTLRI 84
Query: 135 SYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
+YS HT L++K + RSRDYT P P+ S
Sbjct: 85 NYSAHTVLNVKFQSHRSRDYTNPYLPVAPS 114
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYT 29
G C L +T+S HTDL+VK + R RDYT
Sbjct: 199 GYCKLHLTFSRHTDLNVKVNNERGRDYT 226
>gi|218201199|gb|EEC83626.1| hypothetical protein OsI_29352 [Oryza sativa Indica Group]
Length = 461
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/245 (57%), Positives = 172/245 (70%), Gaps = 22/245 (8%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGK EPESNVLL
Sbjct: 187 CHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESNVLL 246
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHC
Sbjct: 247 ASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHC 306
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN----------SQPSILGQQP 173
IYDGG+CKLH+SYSRHTDL++K +++RSRDYT+ S P S P + Q
Sbjct: 307 IYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPGPSTPGVAWQNT 366
Query: 174 VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAG-WGAVPPASQSMPMMGNHPYMPPGSMP 232
P +A+ Y A P + P + AG +G+ A + PMM PGS+P
Sbjct: 367 AP----SASFYGSTAAATPVGQVPAWNPNMQAGAFGSASSAYTTQPMM-------PGSVP 415
Query: 233 MGPGM 237
PG+
Sbjct: 416 HYPGI 420
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q +++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 119 LEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 218
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYT 29
G C L ++YS HTDL+VK RSRDYT
Sbjct: 311 GYCKLHLSYSRHTDLNVKAHDERSRDYT 338
>gi|115476578|ref|NP_001061885.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|42407521|dbj|BAD10638.1| putative polypyrimidine tract-binding protein homolog [Oryza sativa
Japonica Group]
gi|113623854|dbj|BAF23799.1| Os08g0436000 [Oryza sativa Japonica Group]
gi|215695278|dbj|BAG90469.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640621|gb|EEE68753.1| hypothetical protein OsJ_27445 [Oryza sativa Japonica Group]
Length = 461
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 142/245 (57%), Positives = 172/245 (70%), Gaps = 22/245 (8%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q ++G DGK EPESNVLL
Sbjct: 187 CHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGPDGKIKEPESNVLL 246
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHC
Sbjct: 247 ASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHC 306
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN----------SQPSILGQQP 173
IYDGG+CKLH+SYSRHTDL++K +++RSRDYT+ S P S P + Q
Sbjct: 307 IYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPGPSTPGVAWQNT 366
Query: 174 VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAG-WGAVPPASQSMPMMGNHPYMPPGSMP 232
P +A+ Y A P + P + AG +G+ A + PMM PGS+P
Sbjct: 367 AP----SASFYGSTAAATPVGQVPAWNPNMQAGAFGSASSAYPTQPMM-------PGSVP 415
Query: 233 MGPGM 237
PG+
Sbjct: 416 HYPGI 420
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q +++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 119 LEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 218
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYT 29
G C L ++YS HTDL+VK RSRDYT
Sbjct: 311 GYCKLHLSYSRHTDLNVKAHDERSRDYT 338
>gi|125526877|gb|EAY74991.1| hypothetical protein OsI_02889 [Oryza sativa Indica Group]
Length = 583
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/236 (60%), Positives = 168/236 (71%), Gaps = 25/236 (10%)
Query: 3 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 62
PC LRI YSAHT L+VKFQSHRSRDYTNPYLPVAPSAID SG DGKK E ESNVL
Sbjct: 214 PCLLRINYSAHTVLNVKFQSHRSRDYTNPYLPVAPSAIDGSGP-----DGKKQEAESNVL 268
Query: 63 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 122
LAS+ENMQY VT+DVLH VFSAFG VQKIA+F+KN G QALIQYPD+QTAV AKEALEGH
Sbjct: 269 LASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEALEGH 328
Query: 123 CIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATAN 182
IY+GG+CKLH+++SRHTDL++KVNN+R RDYT +T ++QPSILG QPV
Sbjct: 329 SIYEGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPV-------- 380
Query: 183 QYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMG-NHPYMPPGSMPMGPGM 237
Y+GA + P++A VPP + P +HPY +P P +
Sbjct: 381 -YSGA----------YNNAPSSATGAVVPPGTTLTPPGAPSHPYTSSEPLPQTPAV 425
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 74/146 (50%), Gaps = 38/146 (26%)
Query: 56 EPESNVLLASIEN-MQYAVTLDVLHM---------------------------------- 80
E NVLL S+E + AV++DVLH+
Sbjct: 105 EAAGNVLLVSMEGVLPDAVSIDVLHLAIVTEFHGILAGYCIRNTCYQTCGRVNGEWKVAW 164
Query: 81 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE--GHCIYDGGFCKLHISYSR 138
VFSAFG VQKIA F+K G QALIQ+ D +TA AK AL+ G +D C L I+YS
Sbjct: 165 VFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDVIGFQKFDVP-CLLRINYSA 223
Query: 139 HTDLSIKVNNDRSRDYTLPSTPMVNS 164
HT L++K + RSRDYT P P+ S
Sbjct: 224 HTVLNVKFQSHRSRDYTNPYLPVAPS 249
Score = 40.4 bits (93), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYT 29
G C L +T+S HTDL+VK + R RDYT
Sbjct: 334 GYCKLHLTFSRHTDLNVKVNNERGRDYT 361
>gi|207174028|gb|ACI23510.1| putative polypyrimidine tract-binding protein 2 [Triticum
monococcum]
gi|207174032|gb|ACI23512.1| putative polypyrimidine tract-binding protein 2 [Triticum urartu]
Length = 200
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 153/186 (82%), Gaps = 5/186 (2%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 61
G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG +DGKK EPESNV
Sbjct: 8 GSCTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----VDGKKEEPESNV 62
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
LLAS+ENMQY VT+D LH VFSAFG VQKIA+F+KN G ALIQYPD+QTAV A+EALEG
Sbjct: 63 LLASVENMQYIVTIDALHEVFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVKAREALEG 122
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 181
H IY+GG+CKLH+++SRHTDL++++NN+R RDYT ++ N +PSILG QP+ G+TA
Sbjct: 123 HSIYEGGYCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHEPSILGPQPMLAAGSTA 182
Query: 182 NQYNGA 187
Y+ A
Sbjct: 183 PPYSSA 188
>gi|413922344|gb|AFW62276.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 458
Score = 266 bits (679), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 170/243 (69%), Gaps = 23/243 (9%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+ C +RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESN
Sbjct: 180 ISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKIKEPESN 239
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 240 VLLASIENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 299
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS----------TPMVNSQPSILG 170
GHCIYDGG+CKLH+SYSRHTDL++K ++DRSRDYTL P+++S P +
Sbjct: 300 GHCIYDGGYCKLHLSYSRHTDLNVKAHDDRSRDYTLSDPNAQLQAAAQAPVISS-PGVAW 358
Query: 171 QQP-----VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH-P 224
Q P P G+TA Q PP P M P G+ + A + P+M N P
Sbjct: 359 QNPASAPAAPFYGSTAASTPVGQ---PPAWNPNMQAP---GFASASTAYPNPPLMANSTP 412
Query: 225 YMP 227
Y P
Sbjct: 413 YYP 415
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 13/118 (11%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGF----QYTDAPTALEAKNS 165
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
L+G I C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 166 LDGRSIPKYLLPEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 221
>gi|413922343|gb|AFW62275.1| hypothetical protein ZEAMMB73_137441 [Zea mays]
Length = 462
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 170/243 (69%), Gaps = 23/243 (9%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+ C +RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESN
Sbjct: 184 ISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKIKEPESN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS----------TPMVNSQPSILG 170
GHCIYDGG+CKLH+SYSRHTDL++K ++DRSRDYTL P+++S P +
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAHDDRSRDYTLSDPNAQLQAAAQAPVISS-PGVAW 362
Query: 171 QQP-----VPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH-P 224
Q P P G+TA Q PP P M P G+ + A + P+M N P
Sbjct: 363 QNPASAPAAPFYGSTAASTPVGQ---PPAWNPNMQAP---GFASASTAYPNPPLMANSTP 416
Query: 225 YMP 227
Y P
Sbjct: 417 YYP 419
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 9/118 (7%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
L+G I C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|207174030|gb|ACI23511.1| putative polypyrimidine tract-binding protein 2 [Aegilops
speltoides]
Length = 200
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 152/186 (81%), Gaps = 5/186 (2%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 61
G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG +DGKK E ESNV
Sbjct: 8 GSCTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----VDGKKEEAESNV 62
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
LLAS+ENMQY VT+D LH VFSAFG VQKIA+F+KN G ALIQYPD+QTAV A+EALEG
Sbjct: 63 LLASVENMQYIVTIDALHEVFSAFGFVQKIAIFEKNSGFHALIQYPDIQTAVKAREALEG 122
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 181
H IY+GG+CKLH+++SRHTDL++++NN+R RDYT ++ N +PSILG QP+ G+TA
Sbjct: 123 HSIYEGGYCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHEPSILGPQPILAAGSTA 182
Query: 182 NQYNGA 187
Y+ A
Sbjct: 183 PPYSSA 188
>gi|357130514|ref|XP_003566893.1| PREDICTED: polypyrimidine tract-binding protein homolog 2-like
[Brachypodium distachyon]
Length = 544
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 128/186 (68%), Positives = 150/186 (80%), Gaps = 5/186 (2%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 61
G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG LDGKK E ESNV
Sbjct: 185 GACTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----LDGKKQEAESNV 239
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
LLAS+ENMQY VT+D LH VFSAFG V KIA+F+KN G ALIQYPD+QTAV A+EALEG
Sbjct: 240 LLASVENMQYIVTIDALHEVFSAFGFVHKIAIFEKNSGFHALIQYPDIQTAVKAREALEG 299
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 181
H IY+GG+CKLH+++SRHTDL++++NN+R RDYT S+ N +PSILG QP VGA A
Sbjct: 300 HSIYEGGYCKLHLTFSRHTDLNVRINNERGRDYTGGSSAPANYEPSILGPQPTLPVGAVA 359
Query: 182 NQYNGA 187
Y+ A
Sbjct: 360 PPYSSA 365
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 9/113 (7%)
Query: 60 NVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL ++E + AV++DVLH+VFSAFG V KIA F+K G QALIQ+ D +TA AK A
Sbjct: 110 NVLLVTMEGVLPDAVSIDVLHLVFSAFGYVHKIATFEKASGYQALIQFSDAETASSAKAA 169
Query: 119 LEGHCI-------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
L+G CI DG C L I+YS H+ L++K + RSRDYT P P+ S
Sbjct: 170 LDGRCIPSYLLPDLDGA-CTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPS 221
>gi|207174026|gb|ACI23509.1| putative polypyrimidine tract-binding protein 2 [Secale cereale]
Length = 200
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 153/186 (82%), Gaps = 5/186 (2%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 61
G CTLRI YSAH+ L+VKFQSHRSRDYTNPYLP+APSAID SG +DGKK E ESNV
Sbjct: 8 GSCTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSG-----VDGKKEEAESNV 62
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
LLAS+ENMQY VT+D LH VFSA+G VQKIA+F+KN G ALIQYPD+QTAV A+EALEG
Sbjct: 63 LLASVENMQYIVTIDALHEVFSAYGFVQKIAIFEKNSGFHALIQYPDIQTAVKAREALEG 122
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 181
H IY+GG+CKLH+++SRHTDL++++NN+R RDYT ++ N +PSILG QP+ VG+TA
Sbjct: 123 HSIYEGGYCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHEPSILGPQPMLPVGSTA 182
Query: 182 NQYNGA 187
Y+ A
Sbjct: 183 PPYSSA 188
>gi|357147881|ref|XP_003574527.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Brachypodium distachyon]
Length = 459
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 144/170 (84%), Gaps = 3/170 (1%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ QL++G DGK EPESNVLL
Sbjct: 186 CHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQLTLGPDGKVKEPESNVLL 245
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAV +DVLH VF++FG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHC
Sbjct: 246 ASIENMQYAVGVDVLHTVFNSFGTVQKIAMFEKNGGMQALIQYPDISTAAVAKQALEGHC 305
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 173
IYDGG+CKLH+SYSRHTDL++K +++RSRDYT S P Q + GQ P
Sbjct: 306 IYDGGYCKLHLSYSRHTDLNVKAHDERSRDYT-ASNPSAQVQAA--GQAP 352
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E++Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEDVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLPEHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSA-IDASGQ 45
G C L ++YS HTDL+VK RSRDYT PSA + A+GQ
Sbjct: 310 GYCKLHLSYSRHTDLNVKAHDERSRDYT----ASNPSAQVQAAGQ 350
>gi|242079253|ref|XP_002444395.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
gi|241940745|gb|EES13890.1| hypothetical protein SORBIDRAFT_07g021250 [Sorghum bicolor]
Length = 462
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/156 (75%), Positives = 138/156 (88%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+ C +RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESN
Sbjct: 184 ISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGSVQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
GHCIYDGG+CKLH+SYSRHTDL++K +++RSRDYTL
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTL 339
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 9/118 (7%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
L+G I C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHISACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|115453245|ref|NP_001050223.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|18921326|gb|AAL82531.1|AC084766_17 putative polypyrimidine tract-binding protein [Oryza sativa
Japonica Group]
gi|108708433|gb|ABF96228.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113548694|dbj|BAF12137.1| Os03g0376900 [Oryza sativa Japonica Group]
gi|215692946|dbj|BAG88366.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192927|gb|EEC75354.1| hypothetical protein OsI_11790 [Oryza sativa Indica Group]
gi|222625006|gb|EEE59138.1| hypothetical protein OsJ_11035 [Oryza sativa Japonica Group]
Length = 464
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 139/158 (87%), Gaps = 1/158 (0%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQSHRSRDYTNPYLPV SAID + Q +VG DG+K+E E NVLL
Sbjct: 191 CCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGNVLL 249
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHC
Sbjct: 250 ASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTASVAKEALEGHC 309
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
IYDGG+CKLH+SYSRHTDL++K ++D+SRDYT+P M
Sbjct: 310 IYDGGYCKLHLSYSRHTDLNVKAHSDKSRDYTIPQGAM 347
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P+ +S
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDT 229
Query: 169 LGQQPVPMVGA 179
L P VGA
Sbjct: 230 LQ----PAVGA 236
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+VK S +SRDYT P
Sbjct: 314 GYCKLHLSYSRHTDLNVKAHSDKSRDYTIP 343
>gi|194695192|gb|ACF81680.1| unknown [Zea mays]
gi|414870435|tpg|DAA48992.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
gi|414870436|tpg|DAA48993.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 276
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 144/169 (85%), Gaps = 3/169 (1%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 65
+RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLAS
Sbjct: 1 MRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLAS 60
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
IENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIY
Sbjct: 61 IENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIY 120
Query: 126 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 174
DGG+CKLH+SYSRHTDL++K +++RSRDYTL S P V Q + Q PV
Sbjct: 121 DGGYCKLHLSYSRHTDLNVKAHDERSRDYTL-SDPNVQLQAA--AQTPV 166
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYT 29
G C L ++YS HTDL+VK RSRDYT
Sbjct: 123 GYCKLHLSYSRHTDLNVKAHDERSRDYT 150
>gi|195622556|gb|ACG33108.1| hypothetical protein [Zea mays]
Length = 276
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 144/169 (85%), Gaps = 3/169 (1%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 65
+RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESNVLLAS
Sbjct: 1 MRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESNVLLAS 60
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
IENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHCIY
Sbjct: 61 IENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALEGHCIY 120
Query: 126 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 174
DGG+CKLH+SYSRHTDL++K +++RSRDYTL S P V Q + Q PV
Sbjct: 121 DGGYCKLHLSYSRHTDLNVKAHDERSRDYTL-SDPNVQLQAA--AQTPV 166
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYT 29
G C L ++YS HTDL+VK RSRDYT
Sbjct: 123 GYCKLHLSYSRHTDLNVKAHDERSRDYT 150
>gi|15232047|ref|NP_186764.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|75336151|sp|Q9MAC5.1|PTBP1_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 1
gi|6714473|gb|AAF26159.1|AC008261_16 putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
gi|222423255|dbj|BAH19604.1| AT3G01150 [Arabidopsis thaliana]
gi|332640095|gb|AEE73616.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 399
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/234 (57%), Positives = 160/234 (68%), Gaps = 29/234 (12%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C+LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SN
Sbjct: 184 VGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLL IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALE
Sbjct: 244 VLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGG+CKL +SYSRHTDL++K +D+SRDYTLP S+L Q P V +
Sbjct: 304 GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDL-------SLLVAQKGPAVSGS 356
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMG 234
A PP AGW P A G PYM P S P G
Sbjct: 357 A-----------PP----------AGWQN-PQAQSQYSGYGGSPYMYPSSDPNG 388
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E ++ + V++DV+H+VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ A
Sbjct: 110 NVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|186509647|ref|NP_001118547.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
gi|332640096|gb|AEE73617.1| polypyrimidine tract-binding protein 1 [Arabidopsis thaliana]
Length = 370
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/234 (57%), Positives = 160/234 (68%), Gaps = 29/234 (12%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C+LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SN
Sbjct: 155 VGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSN 214
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLL IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALE
Sbjct: 215 VLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALE 274
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGG+CKL +SYSRHTDL++K +D+SRDYTLP S+L Q P V +
Sbjct: 275 GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDL-------SLLVAQKGPAVSGS 327
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMG 234
A PP AGW P A G PYM P S P G
Sbjct: 328 A-----------PP----------AGWQN-PQAQSQYSGYGGSPYMYPSSDPNG 359
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 91 IAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLHISYSRHTDLSI 144
+ F+ +AL+Q+ DV+TA A+ AL+G I G C L +SYS HTDL+I
Sbjct: 113 LVTFEGVESHEALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNI 172
Query: 145 KVNNDRSRDYTLPSTPM 161
K + RSRDYT P P+
Sbjct: 173 KFQSHRSRDYTNPYLPV 189
>gi|242058047|ref|XP_002458169.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
gi|241930144|gb|EES03289.1| hypothetical protein SORBIDRAFT_03g028150 [Sorghum bicolor]
Length = 553
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 123/179 (68%), Positives = 148/179 (82%), Gaps = 6/179 (3%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 61
G CTL+I+YSAH+ L+VK+QSHRSRD+TNPYLP SA DASG LDGKK E ESN+
Sbjct: 185 GACTLKISYSAHSVLNVKYQSHRSRDFTNPYLPFLDSAKDASG-----LDGKKQEAESNI 239
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
LLAS+ENMQY VT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+QTAV AKEALEG
Sbjct: 240 LLASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNG-FQALIQYPDIQTAVAAKEALEG 298
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
H IY+GG+CKLH+++SRHT+L++KVNN+R RDYT + + +PSILG QP+P VGA
Sbjct: 299 HSIYEGGYCKLHLTFSRHTELNVKVNNERGRDYTKGNVTPSSDRPSILGPQPIPNVGAA 357
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 9/117 (7%)
Query: 56 EPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +E + +V++DVLH+VFSAFG V KIA F+K G QALIQ+ D +TA
Sbjct: 106 EGSGNVLLVGMEGVAPDSVSIDVLHVVFSAFGFVHKIATFEKASGYQALIQFSDAETATS 165
Query: 115 AKEALEGHCI-------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
AK AL+G CI DG C L ISYS H+ L++K + RSRD+T P P ++S
Sbjct: 166 AKAALDGRCIPSYLLPELDGA-CTLKISYSAHSVLNVKYQSHRSRDFTNPYLPFLDS 221
>gi|414881408|tpg|DAA58539.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
Length = 560
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/226 (58%), Positives = 157/226 (69%), Gaps = 35/226 (15%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
CTLRITYSAH+ L+VK+QSHRSRD+TNPYLP SA D SG DGKK E ESN+LL
Sbjct: 187 CTLRITYSAHSVLNVKYQSHRSRDFTNPYLPFLDSAKDGSGP-----DGKKQEAESNILL 241
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQY VT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+QTA AKEALEGH
Sbjct: 242 ASIENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNG-FQALIQYPDIQTAYAAKEALEGHS 300
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQ 183
IY+GG+CKLH+++SRHT+L++KVNN+R RDYT + + QPSILG QP+P VGA
Sbjct: 301 IYEGGYCKLHLTFSRHTELNVKVNNERGRDYTKGNATPSSDQPSILGPQPIPSVGA---- 356
Query: 184 YNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 229
A+PPA S+P + MPPG
Sbjct: 357 -------------------------AIPPAQGSVPSAATNSVMPPG 377
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 74/117 (63%), Gaps = 9/117 (7%)
Query: 56 EPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +E + +V++DVLH+VFSAFG V KIA F+K G QALIQ+ D +TA
Sbjct: 106 EGSGNVLLVGMEGVAPDSVSIDVLHVVFSAFGFVHKIATFEKASGYQALIQFSDAETATS 165
Query: 115 AKEALEGHCI-------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
AK AL+G CI D C L I+YS H+ L++K + RSRD+T P P ++S
Sbjct: 166 AKAALDGRCIPSYLLPELDVA-CTLRITYSAHSVLNVKYQSHRSRDFTNPYLPFLDS 221
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTN 30
G C L +T+S HT+L+VK + R RDYT
Sbjct: 305 GYCKLHLTFSRHTELNVKVNNERGRDYTK 333
>gi|326511767|dbj|BAJ92028.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 156/226 (69%), Gaps = 38/226 (16%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQSHRSRDYTNPYLPV SAID++ Q +VG DG+++E E NVLL
Sbjct: 191 CHLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGRRVEAEGNVLL 250
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAV++DVLH VFSAFG VQKIA+F+KNGG QALIQYPD TA + KEALEGHC
Sbjct: 251 ASIENMQYAVSVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDASTATIVKEALEGHC 310
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQ 183
IYDGG+CK+H+SYSRHTDL++K ++D+S+DYT+P
Sbjct: 311 IYDGGYCKIHLSYSRHTDLNVKAHSDKSKDYTIPE------------------------- 345
Query: 184 YNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 229
GAQ A P QP PT AGW A+ PY PPG
Sbjct: 346 --GAQQAAP---QPAGVPPTTAGWQGNSQAAG--------PYGPPG 378
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q + VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQASDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDPPTASA 169
Query: 115 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P VNS S
Sbjct: 170 AREALDGRSIPRYLLPDHVVSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLP-VNS--SA 226
Query: 169 LGQQPVPMVGA 179
+ P VGA
Sbjct: 227 IDSTLQPAVGA 237
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C + ++YS HTDL+VK S +S+DYT P
Sbjct: 315 GYCKIHLSYSRHTDLNVKAHSDKSKDYTIP 344
>gi|326502954|dbj|BAJ99105.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/226 (57%), Positives = 156/226 (69%), Gaps = 38/226 (16%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQSHRSRDYTNPYLPV SAID++ Q +VG DG+++E E NVLL
Sbjct: 64 CHLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGRRVEAEGNVLL 123
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAV++DVLH VFSAFG VQKIA+F+KNGG QALIQYPD TA +AKEALEGHC
Sbjct: 124 ASIENMQYAVSVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDASTATIAKEALEGHC 183
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQ 183
IYDGG+CK+H+SYSRHTDL++K ++D+S+DYT P
Sbjct: 184 IYDGGYCKIHLSYSRHTDLNVKAHSDKSKDYTTP-------------------------- 217
Query: 184 YNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 229
GAQ A P QP PT AGW A+ PY PPG
Sbjct: 218 -EGAQQAAP---QPAGVPPTTAGWQGNSQAAG--------PYGPPG 251
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 81 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF------CKLHI 134
VFSAFG V KIA F+K G QALIQY D TA A+EAL+G I C L I
Sbjct: 9 VFSAFGFVHKIATFEKAAGFQALIQYTDPPTASAAREALDGRSIPRYLLPDHVVSCHLRI 68
Query: 135 SYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 179
S+S H DL+IK + RSRDYT P P VNS S + P VGA
Sbjct: 69 SFSAHKDLNIKFQSHRSRDYTNPYLP-VNS--SAIDSTLQPAVGA 110
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C + ++YS HTDL+VK S +S+DYT P
Sbjct: 188 GYCKIHLSYSRHTDLNVKAHSDKSKDYTTP 217
>gi|326494672|dbj|BAJ94455.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528325|dbj|BAJ93344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 159/218 (72%), Gaps = 12/218 (5%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q +G DG EPESNVLL
Sbjct: 186 CHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGITQPILGSDGMIKEPESNVLL 245
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAV +DVLH VFS+FG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHC
Sbjct: 246 ASIENMQYAVGVDVLHTVFSSFGAVQKIAMFEKNGGMQALIQYPDITTAGVAKQALEGHC 305
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT-LPSTPMVNSQPSILGQQPVP--MVGAT 180
IYDGG+CKLH+SYSRHTDL++K +++RSRDYT L + V + P ++ Q P G++
Sbjct: 306 IYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVLDPSARVQAPPGVVWQSTTPAGFYGSS 365
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 218
A + Q P P M + GA AS S P
Sbjct: 366 AGATSVGQV---PTWNPNMQR------GAFASASTSYP 394
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEGVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLADHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYT 29
G C L ++YS HTDL+VK RSRDYT
Sbjct: 310 GYCKLHLSYSRHTDLNVKAHDERSRDYT 337
>gi|3395938|gb|AAC62015.1| polypyrimidine tract-binding protein homolog [Arabidopsis thaliana]
Length = 418
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 146/175 (83%), Gaps = 2/175 (1%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C+LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SN
Sbjct: 184 VGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLL IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALE
Sbjct: 244 VLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ--PSILGQQP 173
GHCIYDGG+CKL +SYSRHTDL++K +D+SRDYTLP ++ +Q P++ G P
Sbjct: 304 GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP 358
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E ++ + V++DV+H+VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ A
Sbjct: 110 NVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|356531752|ref|XP_003534440.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 467
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/165 (70%), Positives = 141/165 (85%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EPESN
Sbjct: 155 VGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPESN 214
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALE
Sbjct: 215 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALE 274
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 165
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q
Sbjct: 275 GHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQ 319
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Query: 102 ALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
ALIQ+ D +TA A++AL+G I G C L ISYS H DL+IK ++RSRDYT
Sbjct: 124 ALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYT 183
Query: 156 LPSTPM 161
P P+
Sbjct: 184 NPMLPV 189
>gi|356531748|ref|XP_003534438.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/165 (70%), Positives = 141/165 (85%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EPESN
Sbjct: 184 VGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPESN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 165
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQ 348
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPV 218
>gi|356568676|ref|XP_003552536.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 1 [Glycine max]
Length = 496
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/174 (67%), Positives = 145/174 (83%), Gaps = 1/174 (0%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EP+SN
Sbjct: 184 VGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-PSILGQQP 173
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q P+ Q P
Sbjct: 304 GHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQGPATAWQNP 357
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPV 218
>gi|356568678|ref|XP_003552537.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 467
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 118/174 (67%), Positives = 145/174 (83%), Gaps = 1/174 (0%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EP+SN
Sbjct: 155 VGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSN 214
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+ TA A+EALE
Sbjct: 215 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDIITASAAREALE 274
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-PSILGQQP 173
GHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P ++ +Q P+ Q P
Sbjct: 275 GHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLAAQGPATAWQNP 328
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Query: 102 ALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
ALIQ+ D +TA A++AL+G I G C L ISYS H DL+IK ++RSRDYT
Sbjct: 124 ALIQFTDAETASSARDALDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYT 183
Query: 156 LPSTPM 161
P P+
Sbjct: 184 NPMLPV 189
>gi|297832822|ref|XP_002884293.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
gi|297330133|gb|EFH60552.1| polypyrimidine tract-binding [Arabidopsis lyrata subsp. lyrata]
Length = 398
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/234 (56%), Positives = 161/234 (68%), Gaps = 30/234 (12%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SN
Sbjct: 184 VGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVESQSN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLL IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALE
Sbjct: 244 VLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAIAKEALE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
GHCIYDGG+CKL +SYSRHTDL++K +D+SRDYTLP S+L Q+ P V A+
Sbjct: 304 GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDL-------SLLAQKG-PGVSAS 355
Query: 181 ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMG 234
APP Q Q +G+G PYM P S P G
Sbjct: 356 ---------APPTGWQNPQVQTQYSGYGG-------------SPYMYPSSDPNG 387
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E ++ + V++DV+H+VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ A
Sbjct: 110 NVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFSDVETASAARNA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPEHVGSCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 218
>gi|414867006|tpg|DAA45563.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 504
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/155 (72%), Positives = 137/155 (88%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+K+E + NVLL
Sbjct: 189 CCLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGSDGRKVEAQGNVLL 248
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAV++DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHC
Sbjct: 249 ASIENMQYAVSVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVAKEALEGHC 308
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
IYDGG+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 309 IYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDADTASA 167
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
A+EAL+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AREALDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+VK +SRDYT P
Sbjct: 313 GYCKLHLSYSRHTDLNVKAHGDKSRDYTIP 342
>gi|242040789|ref|XP_002467789.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
gi|241921643|gb|EER94787.1| hypothetical protein SORBIDRAFT_01g034060 [Sorghum bicolor]
Length = 486
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 136/155 (87%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q VG DG+K+E + NVLL
Sbjct: 189 CCLRISFSAHQDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPVVGADGRKVEAQGNVLL 248
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAVT+DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHC
Sbjct: 249 ASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVAKEALEGHC 308
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
IYDGG+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 309 IYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL ++E +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTMEGVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
A++AL+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 ARDALDGRSIPSYLLPEHVTSCCLRISFSAHQDLNIKFQSNRSRDYNNPYLPI 220
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+VK +SRDYT P
Sbjct: 313 GYCKLHLSYSRHTDLNVKAHGDKSRDYTIP 342
>gi|226495275|ref|NP_001151769.1| polypyrimidine tract-binding protein [Zea mays]
gi|195649587|gb|ACG44261.1| polypyrimidine tract-binding protein [Zea mays]
Length = 487
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 111/155 (71%), Positives = 137/155 (88%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+++E + NVLL
Sbjct: 189 CCLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGADGRQVEAQGNVLL 248
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAVT+DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKE+LEGHC
Sbjct: 249 ASIENMQYAVTVDVLHTVFSSFGSVQKIAIFEKNGGTQALIQYPDVSTAAVAKESLEGHC 308
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
IYDGG+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 309 IYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
AKE+L+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+VK +SRDYT P
Sbjct: 313 GYCKLHLSYSRHTDLNVKAHGDKSRDYTIP 342
>gi|223972751|gb|ACN30563.1| unknown [Zea mays]
gi|223973771|gb|ACN31073.1| unknown [Zea mays]
Length = 487
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 111/155 (71%), Positives = 137/155 (88%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+++E + NVLL
Sbjct: 189 CCLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGADGRQVEAQGNVLL 248
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAVT+DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKE+LEGHC
Sbjct: 249 ASIENMQYAVTVDVLHTVFSSFGSVQKIAIFEKNGGTQALIQYPDVSTAAVAKESLEGHC 308
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
IYDGG+CKLH+SYSRHTDL++K + D+SRDYT+P+
Sbjct: 309 IYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPA 343
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
AKE+L+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+VK +SRDYT P
Sbjct: 313 GYCKLHLSYSRHTDLNVKAHGDKSRDYTIP 342
>gi|77745463|gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum]
Length = 437
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 142/177 (80%), Gaps = 7/177 (3%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+A++ Q VG DGKK EPESNVL
Sbjct: 187 CHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLF 246
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
AS+ENMQYAVT+DVL+ VFSAFG VQKIA+F+KNG QALIQYPDV A AK+ALEGHC
Sbjct: 247 ASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDALEGHC 306
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
IYDGG+CKLH+SYSRHTDL+++ +D+SRDYT+P + S+L Q V AT
Sbjct: 307 IYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVP-------ESSLLAMQQASAVHAT 356
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG VQKIA F+K G QALIQ+ DV TA A+EA
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+V+ S +SRDYT P
Sbjct: 311 GYCKLHLSYSRHTDLNVQAYSDKSRDYTVP 340
>gi|388491010|gb|AFK33571.1| unknown [Lotus japonicus]
Length = 457
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 177/275 (64%), Gaps = 23/275 (8%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AID + Q VG DGK+ E ESN
Sbjct: 184 VGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNQTAIDGALQPVVGPDGKRTESESN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLA+IENMQYAVT++VLH VFSAFG VQKIA+F+KNG QALIQYPDV TA AKEALE
Sbjct: 244 VLLATIENMQYAVTVEVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTTAAAAKEALE 303
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT----------LPSTPMVN------- 163
GHCIYDGG+CKLH++YSRHTDL++K +D+SRDYT +P+T N
Sbjct: 304 GHCIYDGGYCKLHLTYSRHTDLNVKAYSDKSRDYTVLDPSLRAAQVPATAWPNPQAAPMY 363
Query: 164 --SQPSILGQQPVPMVGAT--ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPM 219
S P++ GQ + + A+Q + P P P + P A + + SM +
Sbjct: 364 PGSAPALQGQVSGGQMSSWDPAHQEVSQSYIPAPGTFP-GYSPAATSSNHLVHNASSMGI 422
Query: 220 MGNHPYMPPGSMPMGPGMMQMHMPGQ-SGMQHHHG 253
N P + P GPG P +G+QH+HG
Sbjct: 423 TQNVHSQPSVASPPGPGSSPHTQPSSFAGLQHYHG 457
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 10/123 (8%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL ++E ++ VT+DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA +A+ A
Sbjct: 110 NVLLVTMEGVEAGDVTIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASLARNA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ- 171
L+G I G C L ISYS H DL+IK ++RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPSYLLPQHVGSCNLRISYSAHRDLNIKFQSNRSRDYTNPMLPV--NQTAIDGAL 227
Query: 172 QPV 174
QPV
Sbjct: 228 QPV 230
>gi|81076794|gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
Length = 442
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 115/162 (70%), Positives = 138/162 (85%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+A++ Q VG DGKK EPESNVL
Sbjct: 187 CHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLF 246
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
AS+ENMQYAVT+DVL+ VFSAFG VQKIA+F+KNG QALIQYPDV A AK+ALEGHC
Sbjct: 247 ASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDALEGHC 306
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 165
IYDGG+CKLH+SYSRHTDL+++ +D+SRDYT+P + ++ Q
Sbjct: 307 IYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQ 348
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG VQKIA F+K G QALIQ+ DV TA A+EA
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+V+ S +SRDYT P
Sbjct: 311 GYCKLHLSYSRHTDLNVQAYSDKSRDYTVP 340
>gi|334702291|gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum]
Length = 467
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 115/162 (70%), Positives = 138/162 (85%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI+YSAHTDL++KFQSHRSRDYTNPYLPV P+A++ Q VG DGKK EPESNVL
Sbjct: 187 CHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGVLQPVVGPDGKKKEPESNVLF 246
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
AS+ENMQYAVT+DVL+ VFSAFG VQKIA+F+KNG QALIQYPDV A AK+ALEGHC
Sbjct: 247 ASLENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTIAAAAKDALEGHC 306
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 165
IYDGG+CKLH+SYSRHTDL+++ +D+SRDYT+P + ++ Q
Sbjct: 307 IYDGGYCKLHLSYSRHTDLNVQAYSDKSRDYTVPESSLLAMQ 348
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG VQKIA F+K G QALIQ+ DV TA A+EA
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVQKIATFEKAAGFQALIQFSDVGTASAAREA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I C L ISYS HTDL+IK + RSRDYT P P+
Sbjct: 170 LDGRSIPKYLLPEHVNHCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPV 218
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+V+ S +SRDYT P
Sbjct: 311 GYCKLHLSYSRHTDLNVQAYSDKSRDYTVP 340
>gi|357501941|ref|XP_003621259.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496274|gb|AES77477.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 780
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/182 (62%), Positives = 137/182 (75%), Gaps = 22/182 (12%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSR----------------------DYTNPYLPVAPS 38
+G C LRI+YSAH DL++KFQS+RS DYTNP LPV S
Sbjct: 451 VGSCNLRISYSAHRDLNIKFQSNRSSLSICPGDDQVLLFYRLGVTEAWDYTNPMLPVNHS 510
Query: 39 AIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
AI+ + Q ++G DGK++E ESNVLLASIENMQYAVT+DV++ VFSAFG VQKIAMF+KNG
Sbjct: 511 AIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNG 570
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QALIQYPDV TA A+EALEGHCIYDGG+CKLH+SYSRHTDL++K +D+SRDYT+P
Sbjct: 571 QTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPL 630
Query: 159 TP 160
P
Sbjct: 631 VP 632
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 80 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLH 133
+VFSAFG V KIA F+K G QALIQ+ D +TA A++AL+G I G C L
Sbjct: 398 VVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLR 457
Query: 134 ISYSRHTDLSIKVNNDRS 151
ISYS H DL+IK ++RS
Sbjct: 458 ISYSAHRDLNIKFQSNRS 475
>gi|255584813|ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223527087|gb|EEF29269.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 483
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 161/272 (59%), Gaps = 47/272 (17%)
Query: 26 RDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAF 85
RDYTNPYLPV P+AI+ Q +VG DGKK EPESNVLLASIENMQYAVT+DV+H VFSAF
Sbjct: 217 RDYTNPYLPVNPTAIEGPVQPAVGPDGKKKEPESNVLLASIENMQYAVTVDVIHTVFSAF 276
Query: 86 GPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIK 145
G VQKIA+F+KNGG QAL+QYPDV TA VAKE LEGHCIYDGG+CKLH+SYSRHTDL++K
Sbjct: 277 GTVQKIAIFEKNGGTQALVQYPDVATAAVAKETLEGHCIYDGGYCKLHLSYSRHTDLNVK 336
Query: 146 VNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAA 205
+D+SRDYT+P S+L VP V + Q +P P+ +AA
Sbjct: 337 AYSDKSRDYTIPDA-------SLLAAGQVPGVPTAPTMWQNPQASP---MYPVNSYASAA 386
Query: 206 GWGAVPPASQ------SMPMMG-NHPYMPPGSMP-------------------------- 232
A PA Q SM G +P +PPG+ P
Sbjct: 387 AVTAQVPAGQVPAWNPSMEAGGPAYPSVPPGTFPGQSYPAPPPTYVSAAMPVGSSPLTQG 446
Query: 233 --MGPGM--MQMHMPGQSGMQHHHGAMPPPRP 260
M PG+ M M PG GA PP +P
Sbjct: 447 SPMSPGVGTMPMTHPGVQSNLRPGGASPPGQP 478
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 15/117 (12%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A+ A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNA 169
Query: 119 LEGHCI--YDGGFCKLHIS------YSRHT------DLSIKVNNDRSRDYTLPSTPM 161
L+G I Y LH+S YSR T DL + RDYT P P+
Sbjct: 170 LDGRSIPKYSFFSLNLHLSLNSALLYSRFTQSKSLDDLQFLICLLNFRDYTNPYLPV 226
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C L ++YS HTDL+VK S +SRDYT P
Sbjct: 319 GYCKLHLSYSRHTDLNVKAYSDKSRDYTIP 348
>gi|357501943|ref|XP_003621260.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496275|gb|AES77478.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 618
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/168 (63%), Positives = 127/168 (75%), Gaps = 22/168 (13%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSR----------------------DYTNPYLPVAPS 38
+G C LRI+YSAH DL++KFQS+RS DYTNP LPV S
Sbjct: 451 VGSCNLRISYSAHRDLNIKFQSNRSSLSICPGDDQVLLFYRLGVTEAWDYTNPMLPVNHS 510
Query: 39 AIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
AI+ + Q ++G DGK++E ESNVLLASIENMQYAVT+DV++ VFSAFG VQKIAMF+KNG
Sbjct: 511 AIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNG 570
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 146
QALIQYPDV TA A+EALEGHCIYDGG+CKLH+SYSRHTDL++KV
Sbjct: 571 QTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKV 618
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 80 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLH 133
+VFSAFG V KIA F+K G QALIQ+ D +TA A++AL+G I G C L
Sbjct: 398 VVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLR 457
Query: 134 ISYSRHTDLSIKVNNDRS 151
ISYS H DL+IK ++RS
Sbjct: 458 ISYSAHRDLNIKFQSNRS 475
>gi|357496461|ref|XP_003618519.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355493534|gb|AES74737.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 483
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 167/296 (56%), Gaps = 54/296 (18%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQL-------------- 46
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AID++ Q+
Sbjct: 185 VGACNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNQAAIDSALQVYCSYFLPLYMFCIF 244
Query: 47 -----------SVGLDGKKLEPESNVLLASIENMQYAVTLDVLH---------MVFSAFG 86
++G DGK+ E +SNVLLA+IENMQYAV LDVLH VFSAFG
Sbjct: 245 LNVLTTLDVQPAIGPDGKRKEHKSNVLLATIENMQYAVPLDVLHSVRILFLIKRVFSAFG 304
Query: 87 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 146
VQK+AMFDKNG ALIQYPD+ A AKE LEGHCIYDGG+CKLH++YSRHTDL++K
Sbjct: 305 FVQKVAMFDKNGHTHALIQYPDLTIAAAAKETLEGHCIYDGGYCKLHLTYSRHTDLNVKA 364
Query: 147 NNDRSRDYTLPSTPMVNSQPSI-LGQQPVPMVGATANQYNGA--QFAPPPPEQPMMHQPT 203
+D+SRDYT+ PS+ Q P A Y+G+ Q P Q + Q
Sbjct: 365 FSDKSRDYTVL-------DPSLHAAQAPAWQTTQAATMYSGSMGQMPSWDPNQQEVTQSY 417
Query: 204 AAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQS------GMQHHHG 253
+ G P + P P P ++P HMP S G Q H+G
Sbjct: 418 LSAPGTFPSGQAAPPF----PGYSPAAVPPAGASPHSHMPPSSFAGAFPGSQPHYG 469
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V K+A F+K G QALIQY D +TA AK++
Sbjct: 111 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDS 170
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 171 LDGRSIPRYLLPEHVGACNLRISYSAHRDLNIKFQSNRSRDYTNPMLPV 219
>gi|414870439|tpg|DAA48996.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 314
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/130 (76%), Positives = 114/130 (87%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C +RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESN
Sbjct: 184 IGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALE
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPDITTAAVAKQALE 303
Query: 121 GHCIYDGGFC 130
GHCIYDGG+C
Sbjct: 304 GHCIYDGGYC 313
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 9/118 (7%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
L+G I G C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHIGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|357147883|ref|XP_003574528.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Brachypodium distachyon]
Length = 313
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/127 (77%), Positives = 113/127 (88%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ QL++G DGK EPESNVLL
Sbjct: 186 CHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQLTLGPDGKVKEPESNVLL 245
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAV +DVLH VF++FG VQKIAMF+KNGG+QALIQYPD+ TA VAK+ALEGHC
Sbjct: 246 ASIENMQYAVGVDVLHTVFNSFGTVQKIAMFEKNGGMQALIQYPDISTAAVAKQALEGHC 305
Query: 124 IYDGGFC 130
IYDGG+C
Sbjct: 306 IYDGGYC 312
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E++Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEDVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLPEHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
>gi|108708434|gb|ABF96229.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 318
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 112/127 (88%), Gaps = 1/127 (0%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQSHRSRDYTNPYLPV SAID + Q +VG DG+K+E E NVLL
Sbjct: 191 CCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGNVLL 249
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHC
Sbjct: 250 ASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTASVAKEALEGHC 309
Query: 124 IYDGGFC 130
IYDGG+C
Sbjct: 310 IYDGGYC 316
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P+ +S
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDT 229
Query: 169 LGQQPVPMVGA 179
L P VGA
Sbjct: 230 LQ----PAVGA 236
>gi|356531750|ref|XP_003534439.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 2 [Glycine max]
Length = 505
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/139 (70%), Positives = 118/139 (84%)
Query: 27 DYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFG 86
DYTNP LPV +AI+ + Q +VG DGK+ EPESNVLLASIENMQYAVT+DVLH VFSAFG
Sbjct: 219 DYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPESNVLLASIENMQYAVTVDVLHTVFSAFG 278
Query: 87 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 146
VQKIA+F+KNG QALIQYPD+ TA A+EALEGHCIYDGG+CKLH+SYSRHTDL++K
Sbjct: 279 TVQKIAIFEKNGQTQALIQYPDIITASAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKA 338
Query: 147 NNDRSRDYTLPSTPMVNSQ 165
+D+SRDYT+P ++ +Q
Sbjct: 339 FSDKSRDYTVPDPSLLAAQ 357
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 119 LEGHCI 124
L+G I
Sbjct: 170 LDGRSI 175
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 44
G C L ++YS HTDL+VK S +SRDYT P PS + A G
Sbjct: 320 GYCKLHLSYSRHTDLNVKAFSDKSRDYTVP----DPSLLAAQG 358
>gi|357119737|ref|XP_003561590.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Brachypodium distachyon]
Length = 522
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 96/125 (76%), Positives = 110/125 (88%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQSHRSRDYTNPYLPV SAID++ Q +VG DG+++E E NVLL
Sbjct: 191 CHLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDSTLQPAVGADGRRVEAEGNVLL 250
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAV++DVLH VFS FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHC
Sbjct: 251 ASIENMQYAVSVDVLHTVFSTFGTVQKIAIFEKNGGTQALIQYPDVTTATVAKEALEGHC 310
Query: 124 IYDGG 128
IYDGG
Sbjct: 311 IYDGG 315
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q + VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQASDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTASA 169
Query: 115 AKEALEGHCIYDGGF------CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P VNS S
Sbjct: 170 AREALDGRSIPRYLLPEHVLSCHLRISFSAHKDLNIKFQSHRSRDYTNPYLP-VNS--SA 226
Query: 169 LGQQPVPMVGA 179
+ P VGA
Sbjct: 227 IDSTLQPAVGA 237
>gi|20260638|gb|AAM13217.1| putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
gi|24899823|gb|AAN65126.1| putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
Length = 189
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/130 (72%), Positives = 113/130 (86%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C+LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SN
Sbjct: 59 VGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQSN 118
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLL IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALE
Sbjct: 119 VLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALE 178
Query: 121 GHCIYDGGFC 130
GHCIYDGG+C
Sbjct: 179 GHCIYDGGYC 188
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFC 130
++ VFSAFG V KIA F+K G QAL+Q+ DV+TA A+ AL+G I G C
Sbjct: 3 IIGQVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSC 62
Query: 131 KLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 63 SLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 93
>gi|336244421|gb|AEI28160.1| polypyrimidine tract-binding protein 1 [Lobularia maritima]
Length = 126
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 111/126 (88%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 65
LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLLA
Sbjct: 1 LRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVETQSNVLLAL 60
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIY
Sbjct: 61 IENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYADIATAAIAKEALEGHCIY 120
Query: 126 DGGFCK 131
DGG+CK
Sbjct: 121 DGGYCK 126
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 132 LHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 1 LRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 30
>gi|238013298|gb|ACR37684.1| unknown [Zea mays]
gi|414867005|tpg|DAA45562.1| TPA: hypothetical protein ZEAMMB73_334584 [Zea mays]
Length = 317
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/127 (73%), Positives = 111/127 (87%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQS+RSRDY NPYLP+ SA+D + Q +VG DG+K+E + NVLL
Sbjct: 189 CCLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGSDGRKVEAQGNVLL 248
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAV++DVLH VFS+FG VQKIA+F+KNGG QALIQYPDV TA VAKEALEGHC
Sbjct: 249 ASIENMQYAVSVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVAKEALEGHC 308
Query: 124 IYDGGFC 130
IYDGG+C
Sbjct: 309 IYDGGYC 315
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDADTASA 167
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
A+EAL+G I C L IS+S H DL+IK ++RSRDY P P+
Sbjct: 168 AREALDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPI 220
>gi|326506386|dbj|BAJ86511.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 313
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 109/127 (85%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRIT+SAH DL++KFQSHRSRDYTNPYLPV P+AI+ Q +G DG EPESNVLL
Sbjct: 186 CHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGITQPILGSDGMIKEPESNVLL 245
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
ASIENMQYAV +DVLH VFS+FG VQKIAMF+KNGG+QALIQYPD+ A VAK+ALEGHC
Sbjct: 246 ASIENMQYAVGVDVLHTVFSSFGAVQKIAMFEKNGGMQALIQYPDITPAGVAKQALEGHC 305
Query: 124 IYDGGFC 130
IYDGG+C
Sbjct: 306 IYDGGYC 312
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q V++DV+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 109 NVLLVTFEGVQPNDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 168
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I C L I++S H DL+IK + RSRDYT P P+
Sbjct: 169 LDGRSIPRYLLADHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV 217
>gi|313757918|gb|ADR78667.1| polypyrimidine tract-binding protein 1 [Matthiola longipetala
subsp. bicornis]
Length = 125
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 108/125 (86%)
Query: 3 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVL 62
C LR++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVL
Sbjct: 1 SCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVETQSNVL 60
Query: 63 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 122
LA IENMQYAVT+DVLH VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGH
Sbjct: 61 LALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGH 120
Query: 123 CIYDG 127
CIYDG
Sbjct: 121 CIYDG 125
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 130 CKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
C L +SYS HTDL+IK + RSRDYT P P+
Sbjct: 2 CNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPV 33
>gi|313757916|gb|ADR78666.1| polypyrimidine tract-binding protein 1 [Iberis amara]
Length = 120
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/120 (73%), Positives = 105/120 (87%)
Query: 7 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASI 66
R++YSAHTDL++KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLLA I
Sbjct: 1 RMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKIETQSNVLLALI 60
Query: 67 ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 126
ENMQYAVT+DVLH VFSA+G +QKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYD
Sbjct: 61 ENMQYAVTVDVLHTVFSAYGTLQKIAIFEKNGSTQALIQYSDJPTAQIAKEALEGHCIYD 120
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 134 ISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
+SYS HTDL+IK + RSRDYT P P+
Sbjct: 2 MSYSAHTDLNIKFQSHRSRDYTNPYLPV 29
>gi|356541547|ref|XP_003539236.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
[Glycine max]
Length = 447
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/163 (58%), Positives = 123/163 (75%), Gaps = 12/163 (7%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP-ESNVL 62
C LRITYSAH DL++KFQS+R+RDYTNP LPV ++ID + ++P E++VL
Sbjct: 190 CNLRITYSAHQDLTIKFQSNRTRDYTNPTLPVNQTSID-----------RAIQPFENHVL 238
Query: 63 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 122
AS ENMQY VT+DVLH VFS +G VQKI++F+KNG ALIQYPD+ TA AK+AL GH
Sbjct: 239 WASFENMQYDVTVDVLHSVFSEYGTVQKISIFEKNGQTHALIQYPDIATATAAKKALMGH 298
Query: 123 CIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 165
CIYDGG CKL +SYS HTD+++K ++D+SRDYT+P+ + Q
Sbjct: 299 CIYDGGCCKLRLSYSHHTDINVKGSSDKSRDYTMPNHGVFEEQ 341
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 80/119 (67%), Gaps = 11/119 (9%)
Query: 58 ESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
+ N+L+ ++E +Q V +DV+H+VFS FG VQKI+ F+KN QA++Q+PDV+TA AK
Sbjct: 111 KGNILIVTMEGIQAGDVGIDVIHLVFSEFGFVQKISTFEKNACFQAMVQFPDVKTASSAK 170
Query: 117 EALEGHCI-------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+AL+G I Y C L I+YS H DL+IK ++R+RDYT P+ P+ +Q SI
Sbjct: 171 DALDGKSIPRYLLPNYVCD-CNLRITYSAHQDLTIKFQSNRTRDYTNPTLPV--NQTSI 226
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNP 31
G C LR++YS HTD++VK S +SRDYT P
Sbjct: 304 GCCKLRLSYSHHTDINVKGSSDKSRDYTMP 333
>gi|313757914|gb|ADR78665.1| polypyrimidine tract-binding protein 1 [Lepidium sativum]
Length = 116
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 99/116 (85%)
Query: 19 KFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL 78
KFQSHRSRDYTNPYLPV +A+D S Q ++G DGKK+E +SNVLL IENMQYAVT+DVL
Sbjct: 1 KFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVESQSNVLLGLIENMQYAVTVDVL 60
Query: 79 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134
H VFSA+G VQKIA+F+KNG QALIQY D+ TA +AKEALEGHCIYDGG+CKL +
Sbjct: 61 HTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRL 116
>gi|384245764|gb|EIE19256.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/157 (61%), Positives = 113/157 (71%), Gaps = 4/157 (2%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG--LDGKKLEPES 59
P +L+ITYS HTDL+VKFQSHRSRDYTN YLP AP+ D + L + + G LE
Sbjct: 184 NPPSLKITYSQHTDLNVKFQSHRSRDYTNLYLPAAPAGGDPNLALGIQAPISGNPLE--G 241
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
NVLL IEN Y V +D L+ VFS +G VQKIA+FDKNG QALIQYPD +A AK AL
Sbjct: 242 NVLLCQIENQAYPVNVDALNTVFSPYGFVQKIAIFDKNGQSQALIQYPDPLSATNAKSAL 301
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
EGH IYDGG+ +L ISYS H +L++K NNDRS DYTL
Sbjct: 302 EGHAIYDGGYNRLKISYSVHRNLNVKANNDRSCDYTL 338
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 75/119 (63%), Gaps = 11/119 (9%)
Query: 53 KKLEPESNVLLASIENM--QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+ E NVLL S+EN+ VTLD LH+VFSAFG VQKIA F+K G QAL+QY D +
Sbjct: 101 RSAEQGGNVLLVSLENLAPDMNVTLDTLHLVFSAFGLVQKIATFEKGQGFQALVQYADAE 160
Query: 111 TAVVAKEALEG-----HCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYT---LPSTP 160
TA + AL+G H + D L I+YS+HTDL++K + RSRDYT LP+ P
Sbjct: 161 TAEQVRLALDGRHIPKHLLNDTPNPPSLKITYSQHTDLNVKFQSHRSRDYTNLYLPAAP 219
>gi|414870437|tpg|DAA48994.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 227
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/108 (75%), Positives = 94/108 (87%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C +RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESN
Sbjct: 115 IGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESN 174
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYP+
Sbjct: 175 VLLASIENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPE 222
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 9/118 (7%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 41 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 100
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
L+G I G C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 101 LDGRSIPKYLLPEHIGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 156
>gi|219363125|ref|NP_001137030.1| uncharacterized protein LOC100217199 [Zea mays]
gi|194698066|gb|ACF83117.1| unknown [Zea mays]
gi|414870440|tpg|DAA48997.1| TPA: hypothetical protein ZEAMMB73_491521 [Zea mays]
Length = 296
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/108 (75%), Positives = 94/108 (87%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C +RIT+SAH DL++KFQSHRSRDYTNPYLPV +AI+ Q +VG DGK EPESN
Sbjct: 184 IGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPVNQTAIEGIVQPTVGPDGKVKEPESN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
VLLASIENMQYAVT+DVLH VFSAFG VQKIAMF+KNGG+QALIQYP+
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGAVQKIAMFEKNGGMQALIQYPE 291
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 9/118 (7%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL + E +Q VT++V+H+VFSAFG V KIA F+K G QALIQY D TA+ AK +
Sbjct: 110 NVLLVTFEGVQPNDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNS 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
L+G I G C + I++S H DL+IK + RSRDYT P P+ +Q +I G
Sbjct: 170 LDGRSIPKYLLPEHIGACHMRITFSAHKDLNIKFQSHRSRDYTNPYLPV--NQTAIEG 225
>gi|108708435|gb|ABF96230.1| Polypyrimidine tract-binding protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 300
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/106 (75%), Positives = 93/106 (87%), Gaps = 1/106 (0%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLL 63
C LRI++SAH DL++KFQSHRSRDYTNPYLPV SAID + Q +VG DG+K+E E NVLL
Sbjct: 191 CCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAID-TLQPAVGADGRKVEAEGNVLL 249
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
ASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNGG QALIQYP++
Sbjct: 250 ASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPEI 295
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q VT+DV+H+VFSAFG V KIA F+K G QALIQY D TA
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A+EAL+G I C L IS+S H DL+IK + RSRDYT P P+ +S
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLPVNSSAIDT 229
Query: 169 LGQQPVPMVGA 179
L P VGA
Sbjct: 230 LQ----PAVGA 236
>gi|414881409|tpg|DAA58540.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
gi|414881410|tpg|DAA58541.1| TPA: hypothetical protein ZEAMMB73_710436 [Zea mays]
Length = 314
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 106/161 (65%), Gaps = 30/161 (18%)
Query: 69 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 128
MQY VT+DVLH VFSAFG VQKIA+F+KNG QALIQYPD+QTA AKEALEGH IY+GG
Sbjct: 1 MQYVVTIDVLHEVFSAFGFVQKIAIFEKNG-FQALIQYPDIQTAYAAKEALEGHSIYEGG 59
Query: 129 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 188
+CKLH+++SRHT+L++KVNN+R RDYT + + QPSILG QP+P VGA
Sbjct: 60 YCKLHLTFSRHTELNVKVNNERGRDYTKGNATPSSDQPSILGPQPIPSVGA--------- 110
Query: 189 FAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPG 229
A+PPA S+P + MPPG
Sbjct: 111 --------------------AIPPAQGSVPSAATNSVMPPG 131
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTN 30
G C L +T+S HT+L+VK + R RDYT
Sbjct: 59 GYCKLHLTFSRHTELNVKVNNERGRDYTK 87
>gi|356568680|ref|XP_003552538.1| PREDICTED: polypyrimidine tract-binding protein homolog 1-like
isoform 3 [Glycine max]
Length = 304
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 93/109 (85%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAH DL++KFQS+RSRDYTNP LPV +AI+ + Q +VG DGK+ EP+SN
Sbjct: 184 VGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYP +
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPGI 292
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L ISYS H DL+IK ++RSRDYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPV 218
>gi|255636160|gb|ACU18422.1| unknown [Glycine max]
Length = 304
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 92/109 (84%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+G C LRI+YSAH DL++KFQS+RS DYTNP LPV +AI+ + Q +VG DGK+ EP+SN
Sbjct: 184 VGSCNLRISYSAHKDLNIKFQSNRSGDYTNPMLPVNYTAIEGAVQTAVGPDGKRKEPDSN 243
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
VLLASIENMQYAVT+DVLH VFSAFG VQKIA+F+KNG QALIQYP +
Sbjct: 244 VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPGI 292
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQ+ D +TA A++A
Sbjct: 110 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASSARDA 169
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
L+G I G C L ISYS H DL+IK ++RS DYT P P+
Sbjct: 170 LDGRSIPRYLLPAHVGSCNLRISYSAHKDLNIKFQSNRSGDYTNPMLPV 218
>gi|357501945|ref|XP_003621261.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355496276|gb|AES77479.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 592
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 92/132 (69%), Gaps = 22/132 (16%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSR----------------------DYTNPYLPVAPS 38
+G C LRI+YSAH DL++KFQS+RS DYTNP LPV S
Sbjct: 451 VGSCNLRISYSAHRDLNIKFQSNRSSLSICPGDDQVLLFYRLGVTEAWDYTNPMLPVNHS 510
Query: 39 AIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
AI+ + Q ++G DGK++E ESNVLLASIENMQYAVT+DV++ VFSAFG VQKIAMF+KNG
Sbjct: 511 AIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNG 570
Query: 99 GLQALIQYPDVQ 110
QALIQYP +
Sbjct: 571 QTQALIQYPGIN 582
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 80 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI------YDGGFCKLH 133
+VFSAFG V KIA F+K G QALIQ+ D +TA A++AL+G I G C L
Sbjct: 398 VVFSAFGFVHKIATFEKTAGFQALIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLR 457
Query: 134 ISYSRHTDLSIKVNNDRS 151
ISYS H DL+IK ++RS
Sbjct: 458 ISYSAHRDLNIKFQSNRS 475
>gi|413955319|gb|AFW87968.1| hypothetical protein ZEAMMB73_683995, partial [Zea mays]
Length = 81
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/81 (70%), Positives = 69/81 (85%)
Query: 27 DYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFG 86
DY NPYLP+ SA+D + Q +VG DG+++E + NVLLASIENMQYAVT+DVLH VFS+FG
Sbjct: 1 DYNNPYLPINYSAMDGTLQPAVGADGRQVEAQGNVLLASIENMQYAVTVDVLHTVFSSFG 60
Query: 87 PVQKIAMFDKNGGLQALIQYP 107
VQKIA+F+KNGG QALIQYP
Sbjct: 61 SVQKIAIFEKNGGTQALIQYP 81
>gi|66472746|ref|NP_001018313.1| polypyrimidine tract binding protein 1a [Danio rerio]
gi|63100731|gb|AAH95372.1| Polypyrimidine tract binding protein 1a [Danio rerio]
Length = 574
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
Query: 36 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 95
A +A+ G +DG + +S VL +EN+ Y VTLDVLH +FS FG V KI F
Sbjct: 168 AVNAVQTGGMSLAAIDGAGMGSQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFT 227
Query: 96 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
KN QAL+QY D TA AK +L+G IY+ C L IS+S+ T L++K NND+SRDYT
Sbjct: 228 KNNQFQALVQYSDGMTAQHAKLSLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYT 286
Query: 156 LPSTPMVNSQPSILGQ 171
P P +SQPS Q
Sbjct: 287 RPDLPTGDSQPSFDAQ 302
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI++S T L+VK+ + +SRDYT P LP S
Sbjct: 261 CTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDS 295
>gi|348510807|ref|XP_003442936.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 575
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QALIQY D TA AK
Sbjct: 194 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKM 253
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPSI Q
Sbjct: 254 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSIDHQAMAAAF 312
Query: 178 GA----TANQYNGAQFAPP 192
A +A+ Y GA PP
Sbjct: 313 AAPGIISASPYGGAHAFPP 331
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI++S T L+VK+ + +SRDYT P LP A S
Sbjct: 265 CTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADS 299
>gi|47198889|emb|CAF88128.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QALIQY D TA AK
Sbjct: 19 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADSMTAQHAKL 78
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P ++QPSI
Sbjct: 79 SLDGQNIYNAC-CTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADAQPSI 128
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA 36
CTLRI++S T L+VK+ + +SRDYT P LP A
Sbjct: 90 CTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTA 122
>gi|432936644|ref|XP_004082208.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oryzias
latipes]
Length = 577
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 85/142 (59%), Gaps = 11/142 (7%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QALIQY D TA AK
Sbjct: 194 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKL 253
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPS+ Q M
Sbjct: 254 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSLDHQ---AMA 309
Query: 178 GA-------TANQYNGAQFAPP 192
A +A+ Y GA PP
Sbjct: 310 AAAFGPGIISASPYGGAHAFPP 331
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI++S T L+VK+ + +SRDYT P LP A S
Sbjct: 265 CTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADS 299
>gi|61403202|gb|AAH91854.1| Ptbp1b protein [Danio rerio]
Length = 586
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 88/136 (64%), Gaps = 4/136 (2%)
Query: 36 APSAIDA--SGQLSVG-LDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 92
A A++A +G L++G +D + S VL +EN+ Y VTLDVLH +FS FG V K+
Sbjct: 184 ALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKVI 243
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSR 152
F KN QAL+Q+ D TA AK AL+G IY+G C L IS+S+ T L++K NND+SR
Sbjct: 244 TFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYNGC-CTLRISFSKLTSLNVKYNNDKSR 302
Query: 153 DYTLPSTPMVNSQPSI 168
DYT P P +SQP++
Sbjct: 303 DYTRPDLPTGDSQPAL 318
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
G CTLRI++S T L+VK+ + +SRDYT P LP S
Sbjct: 278 GCCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDS 314
>gi|169790993|ref|NP_001116126.1| polypyrimidine tract binding protein-like [Danio rerio]
Length = 564
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 88/136 (64%), Gaps = 4/136 (2%)
Query: 36 APSAIDA--SGQLSVG-LDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 92
A A++A +G L++G +D + S VL +EN+ Y VTLDVLH +FS FG V K+
Sbjct: 162 ALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKVI 221
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSR 152
F KN QAL+Q+ D TA AK AL+G IY+G C L IS+S+ T L++K NND+SR
Sbjct: 222 TFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYNGC-CTLRISFSKLTSLNVKYNNDKSR 280
Query: 153 DYTLPSTPMVNSQPSI 168
DYT P P +SQP++
Sbjct: 281 DYTRPDLPTGDSQPAL 296
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
G CTLRI++S T L+VK+ + +SRDYT P LP S
Sbjct: 256 GCCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTGDS 292
>gi|410897871|ref|XP_003962422.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Takifugu rubripes]
Length = 575
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTL+VLH +FS FG V KI F KN QALIQ+ D TA AK
Sbjct: 193 QSPVLRVIVENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKL 252
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPS+ Q
Sbjct: 253 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSLDPQTMAAAF 311
Query: 178 GA----TANQYNGAQFAPP 192
A +A+ Y GA PP
Sbjct: 312 AAPGIISASPYGGAHAFPP 330
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI++S T L+VK+ + +SRDYT P LP A S
Sbjct: 264 CTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADS 298
>gi|410897873|ref|XP_003962423.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Takifugu rubripes]
Length = 577
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTL+VLH +FS FG V KI F KN QALIQ+ D TA AK
Sbjct: 195 QSPVLRVIVENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALIQHVDSMTAQHAKL 254
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
+L+G IY+ C L IS+S+ T L++K NND+SRDYT P P +SQPS+ Q
Sbjct: 255 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQPSLDPQTMAAAF 313
Query: 178 GA----TANQYNGAQFAPP 192
A +A+ Y GA PP
Sbjct: 314 AAPGIISASPYGGAHAFPP 332
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI++S T L+VK+ + +SRDYT P LP A S
Sbjct: 266 CTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADS 300
>gi|397524|emb|CAA52653.1| polypyrimidine tract binding protein [Rattus norvegicus]
Length = 556
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 15/166 (9%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N L + +A+DA G + +S VL +EN+ Y VTLDVLH +FS FG V
Sbjct: 160 NLALRASAAAVDA---------GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVL 210
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F KN QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND
Sbjct: 211 KIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNND 269
Query: 150 RSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 191
+SRDYT P P +SQPS L Q GA +A+ Y GA F P
Sbjct: 270 KSRDYTRPDLPSGDSQPS-LDQTMAAAFGAPGIMSASPYAGAGFPP 314
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|403308155|ref|XP_003944537.1| PREDICTED: uncharacterized protein LOC101029560 [Saimiri
boliviensis boliviensis]
Length = 1167
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 415 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 474
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 475 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 532
Query: 178 GA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 533 GAPGIISASPYAGAGFPP 550
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 486 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 520
>gi|426386370|ref|XP_004059658.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 552
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 172 QPVPMVGATANQYNGAQFAP 191
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|395831594|ref|XP_003788880.1| PREDICTED: polypyrimidine tract-binding protein 1 [Otolemur
garnettii]
Length = 582
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 206 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 265
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 266 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 321
Query: 172 QPVPMVGATANQYNGAQFAP 191
M A A+ Y GA F P
Sbjct: 322 -DQTMAAAFASPYAGAGFPP 340
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 64/195 (32%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------------------------- 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 283 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTF 342
Query: 39 AIDASGQLSV----------------------------GLDGKKLEPESNVLLASIENMQ 70
AI + LSV GL G ++VLL S N +
Sbjct: 343 AIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE 398
Query: 71 YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF 129
VT L ++F +G VQ++ +F+K AL+Q D A +A L GH ++
Sbjct: 399 -RVTPQSLFILFGVYGDVQRVKILFNKKE--NALVQMADANQAQLAMSHLSGHKLHGK-- 453
Query: 130 CKLHISYSRHTDLSI 144
+ I+ S+H ++ +
Sbjct: 454 -PIRITLSKHQNVQL 467
>gi|426229473|ref|XP_004008815.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Ovis
aries]
Length = 550
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 172 QPVPMVGATANQYNGAQFAP 191
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 78/195 (40%), Gaps = 64/195 (32%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------------------------- 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTF 310
Query: 39 AIDASGQLSV----------------------------GLDGKKLEPESNVLLASIENMQ 70
AI + LSV GL G ++VLL S N +
Sbjct: 311 AIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE 366
Query: 71 YAVTLDVLHMVFSAFGPVQKI-AMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF 129
VT L ++F +G VQ++ +F+K AL+Q D A +A L GH ++
Sbjct: 367 -RVTPQSLFILFGVYGDVQRVKVLFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK-- 421
Query: 130 CKLHISYSRHTDLSI 144
+ I+ S+H + +
Sbjct: 422 -PVRITLSKHQSVQL 435
>gi|119581561|gb|EAW61157.1| polypyrimidine tract binding protein 1, isoform CRA_f [Homo
sapiens]
Length = 520
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 203
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 204 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 259
Query: 172 QPVPMVGATANQYNGAQFAP 191
M A A+ Y GA F P
Sbjct: 260 -DQTMAAAFASPYAGAGFPP 278
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 64/195 (32%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------------------------- 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 221 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTF 280
Query: 39 AIDASGQLSV----------------------------GLDGKKLEPESNVLLASIENMQ 70
AI + LSV GL G ++VLL S N +
Sbjct: 281 AIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE 336
Query: 71 YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF 129
VT L ++F +G VQ++ +F+K AL+Q D A +A L GH ++
Sbjct: 337 -RVTPQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK-- 391
Query: 130 CKLHISYSRHTDLSI 144
+ I+ S+H ++ +
Sbjct: 392 -PIRITLSKHQNVQL 405
>gi|73987397|ref|XP_868637.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 6 [Canis
lupus familiaris]
Length = 550
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 172 QPVPMVGATANQYNGAQFAP 191
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 64/195 (32%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------------------------- 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTF 310
Query: 39 AIDASGQLSV----------------------------GLDGKKLEPESNVLLASIENMQ 70
AI + LSV GL G ++VLL S N +
Sbjct: 311 AIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE 366
Query: 71 YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF 129
VT L ++F +G VQ++ +F+K AL+Q D A +A L GH ++
Sbjct: 367 -RVTPQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK-- 421
Query: 130 CKLHISYSRHTDLSI 144
+ I+ S+H ++ +
Sbjct: 422 -PVRITLSKHQNVQL 435
>gi|148699703|gb|EDL31650.1| mCG13402, isoform CRA_g [Mus musculus]
Length = 366
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|402903490|ref|XP_003914598.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Papio
anubis]
Length = 549
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 288
Query: 172 QPVPMVGATANQYNGAQFAP 191
M A A+ Y GA F P
Sbjct: 289 -DQTMAAAFASPYAGAGFPP 307
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 64/195 (32%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------------------------- 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTF 309
Query: 39 AIDASGQLSV----------------------------GLDGKKLEPESNVLLASIENMQ 70
AI + LSV GL G ++VLL S N +
Sbjct: 310 AIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE 365
Query: 71 YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF 129
VT L ++F +G VQ++ +F+K AL+Q D A +A L GH ++
Sbjct: 366 -RVTPQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK-- 420
Query: 130 CKLHISYSRHTDLSI 144
+ I+ S+H ++ +
Sbjct: 421 -PIRITLSKHQNVQL 434
>gi|14165464|ref|NP_114367.1| polypyrimidine tract-binding protein 1 isoform b [Homo sapiens]
gi|332850820|ref|XP_003316018.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 3 [Pan
troglodytes]
gi|35770|emb|CAA46443.1| polypirimidine tract binding protein [Homo sapiens]
gi|119581556|gb|EAW61152.1| polypyrimidine tract binding protein 1, isoform CRA_a [Homo
sapiens]
gi|410218532|gb|JAA06485.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 550
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 5/140 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 289
Query: 172 QPVPMVGATANQYNGAQFAP 191
M A A+ Y GA F P
Sbjct: 290 -DQTMAAAFASPYAGAGFPP 308
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 79/195 (40%), Gaps = 64/195 (32%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------------------------- 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTF 310
Query: 39 AIDASGQLSV----------------------------GLDGKKLEPESNVLLASIENMQ 70
AI + LSV GL G ++VLL S N +
Sbjct: 311 AIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE 366
Query: 71 YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF 129
VT L ++F +G VQ++ +F+K AL+Q D A +A L GH ++
Sbjct: 367 -RVTPQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK-- 421
Query: 130 CKLHISYSRHTDLSI 144
+ I+ S+H ++ +
Sbjct: 422 -PIRITLSKHQNVQL 435
>gi|158454983|gb|AAI03384.1| PTBP1 protein [Bos taurus]
Length = 446
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|355714176|gb|AES04919.1| polypyrimidine tract binding protein 1 [Mustela putorius furo]
Length = 353
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|354480918|ref|XP_003502650.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 591
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 209 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 268
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 269 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 326
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 327 TMAAAFGAPGIMSASPYAGAGFPP 350
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 286 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 320
>gi|344243367|gb|EGV99470.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 528
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 146 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 205
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 206 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 263
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 264 TMAAAFGAPGIMSASPYAGAGFPP 287
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 223 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 257
>gi|312378791|gb|EFR25262.1| hypothetical protein AND_09562 [Anopheles darlingi]
Length = 399
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LDVLH +F FG V KI F KN QALIQYPD QTA AK++
Sbjct: 162 NTVLRVIVESLLYPVSLDVLHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAQTAQTAKQS 221
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ G C L I S+ T L++K NND+SRDYT PS P
Sbjct: 222 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDYTNPSLP 262
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLRI S T L+VK+ + +SRDYTNP LP
Sbjct: 230 GCCTLRIDNSKLTALNVKYNNDKSRDYTNPSLP 262
>gi|444509522|gb|ELV09317.1| Polypyrimidine tract-binding protein 1, partial [Tupaia chinensis]
Length = 522
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 155 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 214
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 215 SLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 272
Query: 178 GA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 273 GAPGIISASPYAGAGFPP 290
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 226 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 260
>gi|426386366|ref|XP_004059656.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 559
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|28849152|dbj|BAC65159.1| polypirimidine tract binding protein [Mus musculus]
Length = 554
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|402743987|ref|NP_001257986.1| polypyrimidine tract-binding protein 1 isoform a [Rattus
norvegicus]
gi|38197632|gb|AAH61858.1| Ptbp1 protein [Rattus norvegicus]
gi|149034647|gb|EDL89384.1| polypyrimidine tract binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 556
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|116517301|ref|NP_001070831.1| polypyrimidine tract-binding protein 1 isoform 1 [Mus musculus]
gi|13938631|gb|AAH07472.1| Polypyrimidine tract binding protein 1 [Mus musculus]
gi|26328983|dbj|BAC28230.1| unnamed protein product [Mus musculus]
gi|26334239|dbj|BAC30837.1| unnamed protein product [Mus musculus]
gi|26335929|dbj|BAC31665.1| unnamed protein product [Mus musculus]
gi|26341260|dbj|BAC34292.1| unnamed protein product [Mus musculus]
gi|26353506|dbj|BAC40383.1| unnamed protein product [Mus musculus]
gi|74191391|dbj|BAE30277.1| unnamed protein product [Mus musculus]
gi|148699699|gb|EDL31646.1| mCG13402, isoform CRA_c [Mus musculus]
Length = 555
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|20809354|gb|AAH28848.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|351714013|gb|EHB16932.1| Polypyrimidine tract-binding protein 1, partial [Heterocephalus
glaber]
Length = 548
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 163 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 222
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 223 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 280
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 281 TMAAAFGAPGIISASPYAGAGFPP 304
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 240 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 274
>gi|74152131|dbj|BAE32096.1| unnamed protein product [Mus musculus]
Length = 555
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|42490826|gb|AAH66210.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|410949959|ref|XP_003981684.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Felis catus]
Length = 508
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|55824722|gb|AAH86489.1| Polypyrimidine tract binding protein 1 [Mus musculus]
Length = 555
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIGFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIGFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|355702910|gb|EHH29401.1| hypothetical protein EGK_09820, partial [Macaca mulatta]
Length = 555
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 172 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 231
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 232 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 289
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 290 TMAAAFGAPGIISASPYAGAGFPP 313
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 249 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 283
>gi|73987389|ref|XP_542215.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Canis
lupus familiaris]
Length = 557
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|440893263|gb|ELR46101.1| Polypyrimidine tract-binding protein 1, partial [Bos grunniens
mutus]
Length = 548
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 165 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 224
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 225 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 282
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 283 TMAAAFGAPGIMSASPYAGAGFPP 306
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 242 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 276
>gi|74194434|dbj|BAE37269.1| unnamed protein product [Mus musculus]
Length = 520
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIMSASPYAGAGFPP 314
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|426229469|ref|XP_004008813.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Ovis
aries]
Length = 557
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|348550210|ref|XP_003460925.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Cavia porcellus]
Length = 557
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GLAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|301776290|ref|XP_002923578.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 526
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|281341342|gb|EFB16926.1| hypothetical protein PANDA_012716 [Ailuropoda melanoleuca]
Length = 540
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 162 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 221
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 222 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 279
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 280 TMAAAFGAPGIMSASPYAGAGFPP 303
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 239 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 273
>gi|119581557|gb|EAW61153.1| polypyrimidine tract binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 527
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 203
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 204 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 261
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 262 TMAAAFGAPGIISASPYAGAGFPP 285
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 221 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 255
>gi|4506243|ref|NP_002810.1| polypyrimidine tract-binding protein 1 isoform a [Homo sapiens]
gi|332850812|ref|XP_001172084.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Pan
troglodytes]
gi|32354|emb|CAA47386.1| nuclear ribonucleoprotein [Homo sapiens]
gi|35772|emb|CAA46444.1| polypirimidine tract binding protein [Homo sapiens]
gi|12803183|gb|AAH02397.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|15489171|gb|AAH13694.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|30582477|gb|AAP35465.1| polypyrimidine tract binding protein 1 [Homo sapiens]
gi|61359435|gb|AAX41718.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|61359442|gb|AAX41719.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|119581558|gb|EAW61154.1| polypyrimidine tract binding protein 1, isoform CRA_c [Homo
sapiens]
gi|410218528|gb|JAA06483.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301208|gb|JAA29204.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 557
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|213513374|ref|NP_001133504.1| polypyrimidine tract-binding protein 2 [Salmo salar]
gi|209154262|gb|ACI33363.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 520
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 67
I YS H +L + R++ A SA+ G + G D S VL I+
Sbjct: 127 IQYSNHKELKTDAGNQRAQAVLQ-----AVSAVQGGGTPTSGSDLALTAASSPVLRIIID 181
Query: 68 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 127
NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D TA AK AL+G IY+
Sbjct: 182 NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPSTAQQAKIALDGQNIYN- 240
Query: 128 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGA 187
C L I YS+ +L++K NND+SRDYT P P + QP++ G +N GA
Sbjct: 241 SCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKDSNSLLGA 300
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKK-------LE 56
CTLRI YS +L+VK+ + +SRDYT P LP ++ GK L
Sbjct: 243 CTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKDSNSLLGALS 302
Query: 57 P---------------------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 95
P S VLLAS N + VT L +F +G Q++ +
Sbjct: 303 PLNAAAAAAAAAGRVALSGHSGSSGVLLASNLN-EEMVTPQSLFTLFGVYGDTQRVKIL- 360
Query: 96 KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
N ALIQ D A +A L G +Y + ++ S+HT + +
Sbjct: 361 YNKKDSALIQMADASQAQLAMSHLNGQKMYGK---VIRVALSKHTSVQL 406
>gi|402903486|ref|XP_003914596.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Papio
anubis]
gi|380814964|gb|AFE79356.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
gi|384948416|gb|AFI37813.1| polypyrimidine tract-binding protein 1 isoform a [Macaca mulatta]
Length = 556
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIISASPYAGAGFPP 314
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|30583817|gb|AAP36157.1| Homo sapiens polypyrimidine tract binding protein 1 [synthetic
construct]
gi|61369451|gb|AAX43339.1| polypyrimidine tract binding protein 1 [synthetic construct]
Length = 558
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|345323919|ref|XP_001506947.2| PREDICTED: polypyrimidine tract-binding protein 1 [Ornithorhynchus
anatinus]
Length = 707
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 94/166 (56%), Gaps = 15/166 (9%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N L + +A+DA G GL S VL +EN+ Y VTLDVLH +FS FG V
Sbjct: 311 NMALSASAAAVDA-GMAIAGL--------SPVLRIIVENLFYPVTLDVLHQIFSKFGTVL 361
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F KN QAL+QY + +A AK +L+G IY+ C L I +S+ T L++K NND
Sbjct: 362 KIITFTKNNQFQALLQYAEPMSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNND 420
Query: 150 RSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 191
+SRDYT P P +SQPS L Q GA +A+ Y GA F P
Sbjct: 421 KSRDYTRPDLPSGDSQPS-LDQTMAAAFGAPGIISASPYAGAGFPP 465
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 401 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 435
>gi|291227384|ref|XP_002733659.1| PREDICTED: polypyrimidine tract-binding protein 1-like
[Saccoglossus kowalevskii]
Length = 558
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G L ++ VL +ENM Y VT+D+LH +FS FG V KI F+KN QALIQ+ D +
Sbjct: 179 GDTLGGQNTVLRVIVENMLYPVTVDILHQIFSKFGAVLKIITFNKNNTFQALIQFADAVS 238
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 166
A +K +L+G IY+ C L I YS+ T L++K NND+SRDYT P P + QP
Sbjct: 239 AQASKLSLDGQNIYN-ACCTLRIDYSKLTTLNVKYNNDKSRDYTRPDLPSGDGQP 292
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI YS T L+VK+ + +SRDYT P LP
Sbjct: 256 CTLRIDYSKLTTLNVKYNNDKSRDYTRPDLP 286
>gi|334326796|ref|XP_001375584.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Monodelphis
domestica]
Length = 557
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKL 239
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 240 SLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 297
Query: 178 GA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 298 GAPGIISASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|395513379|ref|XP_003760903.1| PREDICTED: polypyrimidine tract-binding protein 1 [Sarcophilus
harrisii]
Length = 557
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 180 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYSDPVSAQHAKL 239
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 240 SLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQTMAAAF 297
Query: 178 GA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 298 GAPGIISASPYAGAGFPP 315
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|449273011|gb|EMC82640.1| Polypyrimidine tract-binding protein 1, partial [Columba livia]
Length = 525
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 10/149 (6%)
Query: 20 FQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLH 79
Q+ S N L +P+A+DA G + +S VL +EN+ Y VTLDVLH
Sbjct: 120 LQAVNSVQSGNLALLASPAAVDA---------GMAMAGQSPVLRIIVENLFYPVTLDVLH 170
Query: 80 MVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
+FS FG V KI F KN QAL+QY D +A AK +L+G IY+ C L I +S+
Sbjct: 171 QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNAC-CTLRIEFSKL 229
Query: 140 TDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
T L++K NND+SRDYT P P ++QP++
Sbjct: 230 TSLNVKYNNDKSRDYTRPDLPSGDNQPAL 258
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 220 CTLRIEFSKLTSLNVKYNNDKSRDYTRPDLP 250
>gi|147906715|ref|NP_001083815.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|6002571|gb|AAF00041.1|AF091370_1 hnRNP I-related RNA transport protein VgRBP60 [Xenopus laevis]
Length = 552
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVL +FS FG V KI F KN QAL+QY D +
Sbjct: 177 GIAMSGQSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLKIITFTKNNQFQALLQYGDPVS 236
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P + QPS+
Sbjct: 237 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDGQPSL--D 293
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
Q + GA +AN Y GA F P
Sbjct: 294 QTIAAFGAPGLISANPYAGAGFHP 317
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 254 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 284
>gi|148224882|ref|NP_001080169.1| polypyrimidine tract binding protein 1 [Xenopus laevis]
gi|28278766|gb|AAH45068.1| Ptbp1 protein [Xenopus laevis]
Length = 547
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 16/165 (9%)
Query: 31 PYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQK 90
P L + + +DAS + + G +S VL +EN+ Y VTLDVL +FS FG V K
Sbjct: 159 PVLSASAAVVDAS----IAMSG-----QSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLK 209
Query: 91 IAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDR 150
I F KN QAL+QY D +A AK +L+G IY+ C L I +S+ T L++K NND+
Sbjct: 210 IITFTKNNQFQALLQYGDPMSAQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDK 268
Query: 151 SRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 191
SRDYT P P + QP++ Q + GA + N Y GA F P
Sbjct: 269 SRDYTRPDLPSGDGQPTL--DQTIAAFGAPGLISTNPYAGAGFPP 311
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 248 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 278
>gi|47523538|ref|NP_999396.1| polypyrimidine tract-binding protein 1 [Sus scrofa]
gi|2500586|sp|Q29099.1|PTBP1_PIG RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|1122433|emb|CAA63597.1| polypyrimidine tract-binding protein [Sus scrofa]
Length = 557
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QPS L Q
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 281
>gi|347970969|ref|XP_318405.4| AGAP003945-PA [Anopheles gambiae str. PEST]
gi|333469570|gb|EAA13599.5| AGAP003945-PA [Anopheles gambiae str. PEST]
Length = 601
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LDVLH +F FG V KI F KN QALIQYPD QTA A+ +
Sbjct: 213 NTVLRVIVESLLYPVSLDVLHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAQTAQTARAS 272
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+G C L I S+ T L++K NND+SRDYT PS P
Sbjct: 273 LDGQNIYNGC-CTLRIDNSKLTALNVKYNNDKSRDYTNPSLP 313
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLRI S T L+VK+ + +SRDYTNP LP
Sbjct: 281 GCCTLRIDNSKLTALNVKYNNDKSRDYTNPSLP 313
>gi|387017724|gb|AFJ50980.1| Polypyrimidine tract-binding protein 1-like [Crotalus adamanteus]
Length = 556
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QPS L Q
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIISASPYAGAGFPP 315
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 281
>gi|417402720|gb|JAA48196.1| Putative polypyrimidine tract-binding protein [Desmodus rotundus]
Length = 557
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS L Q
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPS-LDQ 291
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 292 TMAAAFGAPGIMSASPYAGAGFPP 315
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 285
>gi|338720439|ref|XP_001490810.2| PREDICTED: regulator of differentiation 1 isoform 1 [Equus
caballus]
Length = 523
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 113/246 (45%), Gaps = 46/246 (18%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL------DGKKLEPESNV 61
I YS H +L +++R + A A+ A S+ L +G L +S V
Sbjct: 99 IQYSNHRELKTDNLPNQAR------VQAALQAVSAVQSGSLALPGAPTNEGTVLPGQSPV 152
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
L IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 153 LRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDG 212
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 181
IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 213 QNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL------------- 258
Query: 182 NQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMH 241
E PM AA +GA P S P G + P P G G+
Sbjct: 259 -------------EPPM-----AAAFGA--PGIISSPYAGAAGFAPAIGFPQGTGLSVQT 298
Query: 242 MPGQSG 247
+PG G
Sbjct: 299 VPGALG 304
>gi|338720441|ref|XP_003364168.1| PREDICTED: regulator of differentiation 1 isoform 2 [Equus
caballus]
Length = 457
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 113/246 (45%), Gaps = 46/246 (18%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGL------DGKKLEPESNV 61
I YS H +L +++R + A A+ A S+ L +G L +S V
Sbjct: 33 IQYSNHRELKTDNLPNQAR------VQAALQAVSAVQSGSLALPGAPTNEGTVLPGQSPV 86
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
L IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 87 LRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDG 146
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATA 181
IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 147 QNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL------------- 192
Query: 182 NQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMH 241
E PM AA +GA P S P G + P P G G+
Sbjct: 193 -------------EPPM-----AAAFGA--PGIISSPYAGAAGFAPAIGFPQGTGLSVQT 232
Query: 242 MPGQSG 247
+PG G
Sbjct: 233 VPGALG 238
>gi|189241313|ref|XP_966484.2| PREDICTED: similar to polypyrimidine tract binding protein
[Tribolium castaneum]
Length = 822
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL IE+M Y ++LD+LH++F FG V KI F KN QALIQYPD +A AK+A
Sbjct: 428 NTVLRVIIEHMIYPISLDILHLIFQRFGKVLKIVTFTKNNSFQALIQYPDTASAQSAKQA 487
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 488 LDGQNIYNSC-CTLRIDYSKMSSLNVKYNNDKSRDYTNPNLP 528
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 45
CTLRI YS + L+VK+ + +SRDYTNP LP DA+ Q
Sbjct: 498 CTLRIDYSKMSSLNVKYNNDKSRDYTNPNLPTG----DANDQ 535
>gi|270013160|gb|EFA09608.1| hypothetical protein TcasGA2_TC011728 [Tribolium castaneum]
Length = 876
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL IE+M Y ++LD+LH++F FG V KI F KN QALIQYPD +A AK+A
Sbjct: 482 NTVLRVIIEHMIYPISLDILHLIFQRFGKVLKIVTFTKNNSFQALIQYPDTASAQSAKQA 541
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 542 LDGQNIYNSC-CTLRIDYSKMSSLNVKYNNDKSRDYTNPNLP 582
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ 45
CTLRI YS + L+VK+ + +SRDYTNP LP DA+ Q
Sbjct: 552 CTLRIDYSKMSSLNVKYNNDKSRDYTNPNLPTG----DANDQ 589
>gi|320170468|gb|EFW47367.1| polypyrimidine tract-binding protein PTB-2 [Capsaspora owczarzaki
ATCC 30864]
Length = 546
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 42 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 101
ASG S G + EP+ VL I N+ Y VTLDVLH +FS FG V +I F+KN Q
Sbjct: 158 ASGSHS-GNNDSSFEPKP-VLRVEIHNVLYVVTLDVLHQIFSKFGNVLRIITFNKNNLFQ 215
Query: 102 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
A IQY D+ +A AK +L+G IY G C+L I YSR +L+++ NND+ RDYT P+ P
Sbjct: 216 AFIQYADLNSAKNAKSSLDGQSIYTGC-CQLRIFYSRLDELNVRFNNDKCRDYTNPNLPT 274
Query: 162 VNSQP 166
++ P
Sbjct: 275 GDNTP 279
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C LRI YS +L+V+F + + RDYTNP LP
Sbjct: 241 GCCQLRIFYSRLDELNVRFNNDKCRDYTNPNLP 273
>gi|26353062|dbj|BAC40161.1| unnamed protein product [Mus musculus]
Length = 299
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|348522752|ref|XP_003448888.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Oreochromis
niloticus]
Length = 654
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 18 VKFQSHRSRDYTN-PYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLD 76
V+F +H+ N P A +A+ A S +D + P S VL +EN+ Y VTLD
Sbjct: 245 VQFSNHKELKTDNSPNQERAQAALRALS--SSHVDTAAVAP-STVLRVVVENLIYPVTLD 301
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
L +FS FG V +I +F KN QAL+QY D +A AK +L+G IY+G C L IS+
Sbjct: 302 ALCQIFSKFGTVLRIIIFTKNNQFQALLQYSDGASAQAAKLSLDGQNIYNGC-CTLRISF 360
Query: 137 SRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA----TANQYNGAQFAPP 192
S+ T L++K NN++SRD+T P P + QP++ A +A Y GA A P
Sbjct: 361 SKLTSLNVKYNNEKSRDFTRPDLPTGDGQPTMEHTAMATAFAAPGIISAAPYAGATHAFP 420
Query: 193 PPEQPMMHQPTAAGWGAVPPASQSMPMMG 221
P QP A+P A S+ + G
Sbjct: 421 P---AFTLQPAGLAVPALPGALASLSLPG 446
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLRI++S T L+VK+ + +SRD+T P LP
Sbjct: 352 GCCTLRISFSKLTSLNVKYNNEKSRDFTRPDLP 384
>gi|55669744|pdb|1SJR|A Chain A, Nmr Structure Of Rrm2 From Human Polypyrimidine Tract
Binding Protein Isoform 1 (Ptb1)
Length = 164
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 37 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 96
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 97 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 152
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 50
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 114 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 162
>gi|131529|sp|P17225.2|PTBP1_MOUSE RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|53553|emb|CAA36321.1| 25kDa nuclear protein [Mus musculus]
Length = 527
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 50
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 298
>gi|266862|sp|Q00438.1|PTBP1_RAT RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I; AltName: Full=Pyrimidine-binding protein;
Short=PYBP
Length = 555
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 284
>gi|426386368|ref|XP_004059657.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 533
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 50
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 299
>gi|194212378|ref|XP_001915461.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Equus caballus]
Length = 596
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 221 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 280
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK L+ IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 281 AQHAKLLLDAQNIYNAR-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL--- 336
Query: 172 QPVPMVGATANQYNGAQFAP 191
M A A+ Y GA F P
Sbjct: 337 -DQTMAAAFASPYAGAGFPP 355
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 79/194 (40%), Gaps = 63/194 (32%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------------------------- 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 298 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASPYAGAGFPPTF 357
Query: 39 AIDASGQLSV---------------------------GLDGKKLEPESNVLLASIENMQY 71
AI + LSV GL G ++VLL S N +
Sbjct: 358 AIPQAAGLSVPNVHGALAPLAIPSAAAAAAAGRIALPGLAGAG----NSVLLVSNLNPE- 412
Query: 72 AVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC 130
VT L ++F +G VQ++ +F+K AL+Q D A +A L GH ++
Sbjct: 413 RVTPQSLFILFGVYGDVQRVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK--- 467
Query: 131 KLHISYSRHTDLSI 144
+ I+ S+H ++ +
Sbjct: 468 PVRITLSKHQNVQL 481
>gi|159163719|pdb|2ADB|A Chain A, Solution Structure Of Polypyrimidine Tract Binding Protein
Rbd2 Complexed With Cucucu Rna
Length = 148
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 24 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 83
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 84 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 139
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 101 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 135
>gi|165940573|gb|ABY75231.1| polypyrimidine tract-binding protein-like protein [Salvia
officinalis]
Length = 181
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 80/126 (63%), Gaps = 10/126 (7%)
Query: 60 NVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
NVLL +IE ++ V++DV+H+VFSAFG V KIA F+K G QALIQY DVQTA A+++
Sbjct: 36 NVLLVTIEGVEAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYSDVQTASTARDS 95
Query: 119 LEGHCI------YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQ 172
L+G I C L ISYS HTDL+IK + RSRDYT P P+ P+ +
Sbjct: 96 LDGRSIPRYLLPSHVSECYLRISYSAHTDLNIKFQSHRSRDYTNPHLPV---NPTAMDGL 152
Query: 173 PVPMVG 178
P+VG
Sbjct: 153 LQPVVG 158
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+ C LRI+YSAHTDL++KFQSHRSRDYTNP+LPV P+A+D Q VG DGKK E ESN
Sbjct: 110 VSECYLRISYSAHTDLNIKFQSHRSRDYTNPHLPVNPTAMDGLLQPVVGPDGKKKEFESN 169
Query: 61 VLLASIENMQYA 72
VLLASIENMQYA
Sbjct: 170 VLLASIENMQYA 181
>gi|332255809|ref|XP_003277021.1| PREDICTED: polypyrimidine tract-binding protein 1 [Nomascus
leucogenys]
Length = 505
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 143 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 202
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 203 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 258
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 50/181 (27%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID---------ASGQLSV---- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + LSV
Sbjct: 220 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGKRTASLSVPNVH 279
Query: 49 ------------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 84
GL G ++VLL S N + VT L ++F
Sbjct: 280 GALAPLAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGV 334
Query: 85 FGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+G VQ++ +F+K AL+Q D A +A L GH ++ + I+ S+H ++
Sbjct: 335 YGDVQRVKILFNKKEN--ALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQ 389
Query: 144 I 144
+
Sbjct: 390 L 390
>gi|149034648|gb|EDL89385.1| polypyrimidine tract binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 490
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 133 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 192
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 193 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 248
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 37/172 (21%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE----- 56
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 210 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 269
Query: 57 -----------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA- 92
++VLL S N + VT L ++F +G VQ++
Sbjct: 270 LAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKI 328
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
+F+K AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 329 LFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 375
>gi|26331660|dbj|BAC29560.1| unnamed protein product [Mus musculus]
gi|148699700|gb|EDL31647.1| mCG13402, isoform CRA_d [Mus musculus]
Length = 489
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 133 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 192
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 193 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 248
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 36/171 (21%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE----- 56
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 210 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 269
Query: 57 ----------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-M 93
++VLL S N + VT L ++F +G VQ++ +
Sbjct: 270 LAIPSAAAAAAASRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKIL 328
Query: 94 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
F+K AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 329 FNKKE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 374
>gi|402765974|ref|NP_071961.2| polypyrimidine tract-binding protein 1 isoform b [Rattus
norvegicus]
gi|149034649|gb|EDL89386.1| polypyrimidine tract binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 530
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 45/176 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 309
Query: 49 -------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
GL G ++VLL S N + VT L ++F +G VQ
Sbjct: 310 LAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQ 364
Query: 90 KIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
++ +F+K AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 365 RVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 415
>gi|149034650|gb|EDL89387.1| polypyrimidine tract binding protein 1, isoform CRA_d [Rattus
norvegicus]
Length = 500
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 143 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 202
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 203 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 258
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 45/176 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 220 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 279
Query: 49 -------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
GL G ++VLL S N + VT L ++F +G VQ
Sbjct: 280 LAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQ 334
Query: 90 KIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
++ +F+K AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 335 RVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 385
>gi|148699697|gb|EDL31644.1| mCG13402, isoform CRA_b [Mus musculus]
Length = 499
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 143 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 202
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 203 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 258
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 44/175 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 220 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 279
Query: 49 ------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQK 90
GL G ++VLL S N + VT L ++F +G VQ+
Sbjct: 280 LAIPSAAAAAAASRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQR 334
Query: 91 IA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
+ +F+K AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 335 VKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 384
>gi|74196849|dbj|BAE43140.1| unnamed protein product [Mus musculus]
Length = 530
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 45/176 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 309
Query: 49 -------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
GL G ++VLL S N + VT L ++F +G VQ
Sbjct: 310 LAIPSAAAAAAAASRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQ 364
Query: 90 KIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
++ +F+K AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 365 RVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 415
>gi|116517303|ref|NP_032982.2| polypyrimidine tract-binding protein 1 isoform 2 [Mus musculus]
gi|26336949|dbj|BAC32158.1| unnamed protein product [Mus musculus]
gi|26342100|dbj|BAC34712.1| unnamed protein product [Mus musculus]
gi|26349809|dbj|BAC38544.1| unnamed protein product [Mus musculus]
gi|74211646|dbj|BAE29183.1| unnamed protein product [Mus musculus]
gi|74212275|dbj|BAE40295.1| unnamed protein product [Mus musculus]
gi|148699696|gb|EDL31643.1| mCG13402, isoform CRA_a [Mus musculus]
gi|148699698|gb|EDL31645.1| mCG13402, isoform CRA_a [Mus musculus]
Length = 529
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 44/175 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 309
Query: 49 ------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQK 90
GL G ++VLL S N + VT L ++F +G VQ+
Sbjct: 310 LAIPSAAAAAAASRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQR 364
Query: 91 IA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
+ +F+K AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 365 VKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 414
>gi|148699701|gb|EDL31648.1| mCG13402, isoform CRA_e [Mus musculus]
Length = 454
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 189 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 248
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 249 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 304
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 55/190 (28%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVG---LDGKKLEPE 58
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + L+G KL +
Sbjct: 266 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFAMSHLNGHKLHGK 325
Query: 59 S-NVLLASIENMQY---------------------------------------------- 71
S + L+ +++Q
Sbjct: 326 SVRITLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIP 385
Query: 72 -AVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC 130
+V+ D L +FS+ G V K F + ALIQ V+ AV A L H + G
Sbjct: 386 PSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDL--GENH 443
Query: 131 KLHISYSRHT 140
L +S+S+ T
Sbjct: 444 HLRVSFSKST 453
>gi|354504485|ref|XP_003514305.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
Length = 322
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 129 GMAMAGQSPVLRILVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNRFQALLQYADPVS 188
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY +C L I +S+ T L +K NND+SRDYT P P +SQPS+
Sbjct: 189 AQHAKLSLDGQNIYK-AWCSLRIDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSL 244
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 50
C+LRI +S T L VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 206 CSLRIDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 254
>gi|57002|emb|CAA43202.1| pyrimidine binding protein 1 [Rattus norvegicus]
Length = 530
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 45/176 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 309
Query: 49 -------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
GL G ++VLL S N + VT L ++F +G VQ
Sbjct: 310 LAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQ 364
Query: 90 KIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
++ +F+K AL++ D A +A L GH ++ + I+ S+H + +
Sbjct: 365 RVKILFNKKE--NALVEMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 415
>gi|27806103|ref|NP_776867.1| polypyrimidine tract-binding protein 1 [Bos taurus]
gi|426229471|ref|XP_004008814.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Ovis
aries]
gi|75073578|sp|Q8WN55.1|PTBP1_BOVIN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB
gi|17298537|gb|AAL38169.1|AF445640_1 polypyrimidine-tract binding protein [Bos taurus]
gi|296485353|tpg|DAA27468.1| TPA: polypyrimidine tract-binding protein 1 [Bos taurus]
Length = 531
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 47/177 (26%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE----- 56
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 310
Query: 57 -----------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI-A 92
++VLL S N + VT L ++F +G VQ++
Sbjct: 311 LAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKV 369
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH-----ISYSRHTDLSI 144
+F+K AL+Q D A +A L GH KLH I+ S+H + +
Sbjct: 370 LFNKKE--NALVQMADGSQAQLAMSHLNGH--------KLHGKPVRITLSKHQSVQL 416
>gi|119581562|gb|EAW61158.1| polypyrimidine tract binding protein 1, isoform CRA_g [Homo
sapiens]
Length = 501
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 203
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 204 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 259
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 45/176 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 221 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 280
Query: 49 -------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
GL G ++VLL S N + VT L ++F +G VQ
Sbjct: 281 LAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQ 335
Query: 90 KIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
++ +F+K AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 336 RVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 386
>gi|402903488|ref|XP_003914597.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Papio
anubis]
gi|380814966|gb|AFE79357.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
gi|384948418|gb|AFI37814.1| polypyrimidine tract-binding protein 1 isoform c [Macaca mulatta]
Length = 530
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 37/172 (21%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE----- 56
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 309
Query: 57 -----------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA- 92
++VLL S N + VT L ++F +G VQ++
Sbjct: 310 LAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKI 368
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
+F+K AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 369 LFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 415
>gi|348550212|ref|XP_003460926.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Cavia porcellus]
Length = 531
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GLAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 45/176 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP--------------------------VAP 37
CTLRI +S T L+VK+ + +SRDYT P LP +AP
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 310
Query: 38 SAI-------DASGQLSV-GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
AI A+G++ + GL G ++VLL S N + VT L ++F +G VQ
Sbjct: 311 LAIPSAAAAAAAAGRIGIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQ 365
Query: 90 KIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
++ +F+K AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 366 RVKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 416
>gi|14165466|ref|NP_114368.1| polypyrimidine tract-binding protein 1 isoform c [Homo sapiens]
gi|332850814|ref|XP_003316017.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Pan
troglodytes]
gi|131528|sp|P26599.1|PTBP1_HUMAN RecName: Full=Polypyrimidine tract-binding protein 1; Short=PTB;
AltName: Full=57 kDa RNA-binding protein PPTB-1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein I;
Short=hnRNP I
gi|35768|emb|CAA43973.1| polypirimidine tract binding protein [Homo sapiens]
gi|35774|emb|CAA43056.1| polypyrimidine tract-binding protein (pPTB) [Homo sapiens]
gi|4096061|gb|AAC99798.1| PTB_HUMAN [Homo sapiens]
gi|13325140|gb|AAH04383.1| Polypyrimidine tract binding protein 1 [Homo sapiens]
gi|119581559|gb|EAW61155.1| polypyrimidine tract binding protein 1, isoform CRA_d [Homo
sapiens]
gi|261860774|dbj|BAI46909.1| polypyrimidine tract binding protein 1 [synthetic construct]
gi|410218530|gb|JAA06484.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
gi|410301206|gb|JAA29203.1| polypyrimidine tract binding protein 1 [Pan troglodytes]
Length = 531
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 45/176 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 310
Query: 49 -------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
GL G ++VLL S N + VT L ++F +G VQ
Sbjct: 311 LAIPSAAAAAAAAGRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQ 365
Query: 90 KIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
++ +F+K AL+Q D A +A L GH ++ + I+ S+H ++ +
Sbjct: 366 RVKILFNKKE--NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSKHQNVQL 416
>gi|73987401|ref|XP_868641.1| PREDICTED: polypyrimidine tract-binding protein 1 isoform 8 [Canis
lupus familiaris]
Length = 531
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 47/177 (26%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE----- 56
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 310
Query: 57 -----------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA- 92
++VLL S N + VT L ++F +G VQ++
Sbjct: 311 LAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKI 369
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH-----ISYSRHTDLSI 144
+F+K AL+Q D A +A L GH KLH I+ S+H ++ +
Sbjct: 370 LFNKKE--NALVQMADGSQAQLAMSHLNGH--------KLHGKPVRITLSKHQNVQL 416
>gi|62087400|dbj|BAD92147.1| polypyrimidine tract-binding protein 1 isoform c variant [Homo
sapiens]
Length = 329
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 191 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 250
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 251 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 306
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 268 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 302
>gi|357133525|ref|XP_003568375.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 444
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LLA+I +M Y +T++VLH VF A+G V+
Sbjct: 72 NIYMQFSSHQELTTDQSSHGRNSDQDSEPNRILLATIHHMIYPITVEVLHQVFKAYGYVE 131
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F+K+ G QALIQY Q AV A AL G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFNKSAGFQALIQYQSRQEAVEAFGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 35/168 (20%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV------------------------AP 37
G C L I YS ++L V + + RSRD+TNP LP AP
Sbjct: 169 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRSSQQGYPDPGGLYAFQQPGAP 228
Query: 38 SAIDASGQLSVGLDGKKLEP------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI 91
A + G L P E L+ S N + D L +FS +G + +I
Sbjct: 229 YAQMGRAAMIAAAFGGTLPPGVTGTNERCTLIVSNLNTD-KINEDKLFNLFSLYGNIVRI 287
Query: 92 AMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
+ +N AL++ D A +A L+G ++ KL ++YS++
Sbjct: 288 KVL-RNKPDHALVEMADGFQAELAVHYLKGAMLFGN---KLEVNYSKY 331
>gi|344251032|gb|EGW07136.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 323
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 169 GMAMAGQSPVLRILVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNRFQALLQYADPVS 228
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY +C L I +S+ T L +K NND+SRDYT P P +SQPS+
Sbjct: 229 AQHAKLSLDGQNIYK-AWCSLRIDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSL 284
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 50
C+LRI +S T L VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 246 CSLRIDFSKLTSLYVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 294
>gi|19911240|dbj|BAB86943.1| polypirimidine tract binding protein [Mus musculus]
Length = 528
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L + +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLDGQNIYNAC-CTLRVDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 44/175 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLR+ +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 250 CTLRVDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 309
Query: 49 ------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQK 90
GL G ++VLL S N + VT L ++F +G VQ+
Sbjct: 310 LAIPSAAAAAAASRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQR 364
Query: 91 IA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
+ +F+K AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 365 VKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 414
>gi|58331982|ref|NP_001011140.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|54261503|gb|AAH84469.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|89272472|emb|CAJ82472.1| polypyrimidine tract binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 554
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVL +FS FG V KI F KN QAL+QY D +
Sbjct: 177 GMAMSGQSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLKIITFTKNNQFQALLQYGDPVS 236
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P + QPS+
Sbjct: 237 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDGQPSL--D 293
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
Q + GA +AN Y A F P
Sbjct: 294 QTIAAFGAPGLISANPYASAGFPP 317
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 254 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 284
>gi|224087659|ref|XP_002196400.1| PREDICTED: polypyrimidine tract-binding protein 1 [Taeniopygia
guttata]
Length = 525
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK
Sbjct: 150 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNHQFQALLQYADPMSAQHAKL 209
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQP++
Sbjct: 210 SLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPTL 259
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 221 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 255
>gi|348505292|ref|XP_003440195.1| PREDICTED: regulator of differentiation 1 [Oreochromis niloticus]
Length = 514
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 109/219 (49%), Gaps = 32/219 (14%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA----SGQLSVGLDGKKLEP-ESNVL 62
I YS H +L ++ + T+ A AI+A SG ++ G +G+ + P +S VL
Sbjct: 111 IQYSTHREL-------KTDNMTSQRAQAALQAINAGAVHSGNMTSGGEGRGIAPGQSPVL 163
Query: 63 LASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 122
+EN+ Y VTL+VL +FS FG V KI F +N QAL+Q+ D A AK L+G
Sbjct: 164 RIIVENLFYPVTLEVLQQIFSKFGSVLKIITFTRNNQFQALLQFSDTVHAQHAKATLDGQ 223
Query: 123 CIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---LPSTPMVNSQPSILGQQPVPMVGA 179
IY+G C L I +S+ + L++K NND+SRD+T LPS + +P G
Sbjct: 224 NIYNGC-CTLRIDFSKLSALNVKYNNDKSRDFTRADLPSGEL----------EPTAAFGV 272
Query: 180 TANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 218
Y A F P HQ T AVP + S P
Sbjct: 273 ALPPYGAAAFPPT------FHQHTGLSMAAVPGSLVSHP 305
>gi|431922192|gb|ELK19283.1| Polypyrimidine tract-binding protein 1 [Pteropus alecto]
Length = 566
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 180 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 239
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 240 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 295
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGL 50
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL
Sbjct: 257 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGL 305
>gi|149037108|gb|EDL91639.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
gi|149037109|gb|EDL91640.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b
[Rattus norvegicus]
Length = 514
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 121 SGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 180
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 181 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 239
Query: 159 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 218
P + QPS+ E PM AA +GA P S P
Sbjct: 240 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 266
Query: 219 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 247
G + P + P G+ +PG G
Sbjct: 267 YAGAAGFAPAIAFPQAAGLSVSAVPGALG 295
>gi|402588250|gb|EJW82183.1| hypothetical protein WUBG_06907, partial [Wuchereria bancrofti]
Length = 255
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 35 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 94
++ SA+D S + +P S VL IENM Y VTLDVLH +FS +G V +I F
Sbjct: 19 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITF 70
Query: 95 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 71 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 129
Query: 155 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 212
T P+ P S L QQ + AT G Q P ++ P A +GA P
Sbjct: 130 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPAIAS--LVQSPFAFPFGAANP 177
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C LRI YS L+VK+ + +SRDYTNP LP
Sbjct: 103 GCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLP 135
>gi|417402381|gb|JAA48040.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 531
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY + +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 234 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 289
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 47/177 (26%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGKKLE----- 56
CTLRI +S T L+VK+ + +SRDYT P LP S ++D + + GL +
Sbjct: 251 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 310
Query: 57 -----------------------PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA- 92
++VLL S N + VT L ++F +G VQ++
Sbjct: 311 LAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPER-VTPQSLFILFGVYGDVQRVKI 369
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH-----ISYSRHTDLSI 144
+F+K AL+Q D A +A L GH KLH I+ S+H ++ +
Sbjct: 370 LFNKKE--NALVQMADGSQAQLAMSHLNGH--------KLHGKPVRITLSKHQNVQL 416
>gi|74178228|dbj|BAE29899.1| unnamed protein product [Mus musculus]
Length = 529
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L G IY+ C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSLGGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 288
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 44/175 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AID----ASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S ++D A+ LSV
Sbjct: 250 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 309
Query: 49 ------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQK 90
GL G ++VLL S N + VT L ++F +G VQ+
Sbjct: 310 LAIPSAAAAAAASRIAIPGLAG----AGNSVLLVSNLNPE-RVTPQSLFILFGVYGDVQR 364
Query: 91 IA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
+ +F+K AL+Q D A +A L GH ++ + I+ S+H + +
Sbjct: 365 VKILFNKKE--NALVQMADGSQAQLAMSHLNGHKLHGKS---VRITLSKHQSVQL 414
>gi|157137151|ref|XP_001663911.1| polypyrimidine tract binding protein [Aedes aegypti]
gi|108869791|gb|EAT34016.1| AAEL013723-PA [Aedes aegypti]
Length = 539
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LD+L+ +F FG V KI F KN QALIQYPD TA +AK+
Sbjct: 151 NTVLRVIVESLLYPVSLDILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDAATAQLAKQT 210
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+G C L I S+ T L++K NND+SRDYT P+ P
Sbjct: 211 LDGQNIYNGC-CTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 251
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLRI S T L+VK+ + +SRDYTNP LP
Sbjct: 219 GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 251
>gi|224089408|ref|XP_002188238.1| PREDICTED: polypyrimidine tract-binding protein 3 [Taeniopygia
guttata]
Length = 488
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
+VL +EN+ Y VTLD+L+ +FS FG V +I MF KN Q+L+QY D A AK +L
Sbjct: 147 SVLRIIVENVFYPVTLDILYQIFSKFGFVLRIIMFHKNNQFQSLLQYSDAMNAYYAKMSL 206
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+GHCIY G C L I +S+ +L++K NND+SRD+T P + Q ++
Sbjct: 207 DGHCIYTGC-CTLRIEFSKLANLTVKYNNDKSRDFTRIDLPFGDGQRTV 254
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 24/146 (16%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTN---PY----------LPVAPSAIDASGQL-- 46
G CTLRI +S +L+VK+ + +SRD+T P+ +P PS + G L
Sbjct: 214 GCCTLRIEFSKLANLTVKYNNDKSRDFTRIDLPFGDGQRTVETSIPFGPSVLPVPGALGP 273
Query: 47 ----SVGLDGKKLEPE---SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGG 99
+ G P+ ++VLL S N + A+T L ++F +G V ++ + K G
Sbjct: 274 LMVTTSAAPGHMTIPDIPGNSVLLVSNLNPE-AITPYGLFILFGVYGDVHRVKIMFKKRG 332
Query: 100 LQALIQYPDVQTAVVAKEALEGHCIY 125
+ AL+Q D A +A L G +Y
Sbjct: 333 I-ALVQMADATQAQLAINYLNGQRLY 357
>gi|13786186|ref|NP_112636.1| polypyrimidine tract-binding protein 3 [Rattus norvegicus]
gi|50401225|sp|Q9Z118.1|PTBP3_RAT RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|4514552|dbj|BAA75465.1| Rod1 [Rattus norvegicus]
Length = 523
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 130 SGNLSLPGATSNEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 189
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 190 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 248
Query: 159 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 218
P + QPS+ E PM AA +GA P S P
Sbjct: 249 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 275
Query: 219 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 247
G + P + P G+ +PG G
Sbjct: 276 YAGAAGFAPAIAFPQAAGLSVSAVPGALG 304
>gi|148680405|gb|EDL12352.1| polypyrimidine tract binding protein 2, isoform CRA_b [Mus
musculus]
Length = 529
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 61
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 125 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 177
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 178 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 237
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 238 QNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 245 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 304
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 305 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 362
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 363 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 407
>gi|53850638|ref|NP_001005555.1| polypyrimidine tract-binding protein 2 [Rattus norvegicus]
gi|81910658|sp|Q66H20.1|PTBP2_RAT RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=PTB-like protein
gi|93140675|sp|Q91Z31.2|PTBP2_MOUSE RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Brain-enriched polypyrimidine tract-binding
protein; Short=Brain-enriched PTB; AltName: Full=Neural
polypyrimidine tract-binding protein; AltName:
Full=RRM-type RNA-binding protein brPTB
gi|51859313|gb|AAH82076.1| Polypyrimidine tract binding protein 2 [Rattus norvegicus]
gi|149025819|gb|EDL82062.1| polypyrimidine tract binding protein 2, isoform CRA_b [Rattus
norvegicus]
Length = 531
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 59
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 308 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|148680404|gb|EDL12351.1| polypyrimidine tract binding protein 2, isoform CRA_a [Mus
musculus]
Length = 528
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 59
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 123 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 175
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 176 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 235
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 236 DGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 245 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 304
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 305 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 362
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 363 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 407
>gi|25392158|pir||JC7526 polypyrimidine tract-binding protein-like protein - rat
Length = 532
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 59
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 239 DGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 308 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|16307418|gb|AAH10255.1| Polypyrimidine tract binding protein 2 [Mus musculus]
Length = 531
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 59
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 239 DGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 308 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|9507003|ref|NP_062423.1| polypyrimidine tract-binding protein 2 [Mus musculus]
gi|8358154|gb|AAF21807.2|AF095718_1 RRM-type RNA-binding protein brPTB [Mus musculus]
gi|5824110|emb|CAB54073.1| PTB-like protein [Rattus rattus]
gi|22711857|tpg|DAA00061.1| TPA_exp: splicing regulator nPTB2 [Mus musculus]
gi|74209570|dbj|BAE23317.1| unnamed protein product [Mus musculus]
Length = 532
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 89/167 (53%), Gaps = 14/167 (8%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 61
I YS H +L ++ + N V A+ A + L G + +S V
Sbjct: 128 IQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV 180
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 181 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 240
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 241 QNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 308 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|149037107|gb|EDL91638.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a
[Rattus norvegicus]
Length = 528
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 95/197 (48%), Gaps = 34/197 (17%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 173 EGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 232
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 233 NAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 289
Query: 171 QQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGS 230
E PM AA +GA P S P G + P +
Sbjct: 290 ------------------------EPPM-----AAAFGA--PGIMSSPYAGAAGFAPAIA 318
Query: 231 MPMGPGMMQMHMPGQSG 247
P G+ +PG G
Sbjct: 319 FPQAAGLSVSAVPGALG 335
>gi|426219707|ref|XP_004004060.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Ovis
aries]
Length = 526
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 102/192 (53%), Gaps = 15/192 (7%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 202
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 259
Query: 171 QQPVPMV------GATANQYNGAQ-FAPPP--PEQPMMHQPTAAGWGAVPP-ASQSMPMM 220
+P PM G ++ Y GA FAP P+ + P G GA+ P A S +
Sbjct: 260 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAGLGPGALGPLAITSSAVT 317
Query: 221 GNHPYMPPGSMP 232
G G MP
Sbjct: 318 GRMAIPGAGGMP 329
>gi|28949889|emb|CAD70621.1| polypyrimidine track-binding protein homologue [Cicer arietinum]
Length = 442
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL ++ MQY +T+DVL VFS G V+KI F K+ G QALIQY Q+
Sbjct: 91 GRDDEP-NRILLVTVHQMQYPITVDVLQQVFSPHGYVEKIVTFQKSAGFQALIQYESRQS 149
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ +L+G IYDG C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 150 AVTARSSLQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDYTNPNLP 197
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 43/173 (24%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------------- 36
G C L I +S +L V + + RSRDYTNP LP
Sbjct: 165 GCCQLDIQFSNLDELQVNYNNDRSRDYTNPNLPTEQKGRPSHSGYGDTGMHGVQGSGARP 224
Query: 37 --------PSAIDAS--GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFG 86
+AI+A+ G L G+ G VL+A++ + + D L +FS +G
Sbjct: 225 GGFSQMTNAAAIEAAFGGDLPPGITGTN--DRCTVLVANLNPDR--IDEDKLFNLFSIYG 280
Query: 87 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
+ +I + +N AL+Q D A +A L+G ++ +L +++S+H
Sbjct: 281 NIVRIKLL-RNKPDHALVQMGDGFQAELAVYFLKGAMLFGK---RLEVNFSKH 329
>gi|449508136|ref|XP_002190438.2| PREDICTED: polypyrimidine tract-binding protein 2 [Taeniopygia
guttata]
Length = 537
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+Q+ D A AK+
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQFGDPVNAQQAKQ 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPTL 286
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 278
>gi|348586487|ref|XP_003479000.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cavia
porcellus]
Length = 581
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 226 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 285
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 286 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 335
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 297 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 356
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 357 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 414
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 415 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 459
>gi|13879326|gb|AAH06638.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 520
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 127 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 186
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 187 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 245
Query: 159 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 209
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 246 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 295
Query: 210 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 248
VP A + P ++ +M +PG SGM
Sbjct: 296 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 322
>gi|410967802|ref|XP_003990404.1| PREDICTED: polypyrimidine tract-binding protein 2 [Felis catus]
Length = 566
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 211 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 270
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 271 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 320
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 282 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 341
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 342 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 399
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 400 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 444
>gi|71896363|ref|NP_001026106.1| polypyrimidine tract-binding protein 1 [Gallus gallus]
gi|60098495|emb|CAH65078.1| hypothetical protein RCJMB04_3b17 [Gallus gallus]
Length = 526
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMS 203
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QP L Q
Sbjct: 204 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPP-LDQ 261
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA A+ Y GA F P
Sbjct: 262 TMAAAFGAPGIIPASPYAGAGFPP 285
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 221 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 251
>gi|30039680|ref|NP_835458.1| polypyrimidine tract-binding protein 3 isoform 2 [Mus musculus]
gi|50401558|sp|Q8BHD7.1|PTBP3_MOUSE RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|26329429|dbj|BAC28453.1| unnamed protein product [Mus musculus]
gi|26353590|dbj|BAC40425.1| unnamed protein product [Mus musculus]
gi|34785867|gb|AAH57641.1| ROD1 regulator of differentiation 1 (S. pombe) [Mus musculus]
Length = 523
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 130 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 189
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 190 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 248
Query: 159 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 209
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 249 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 298
Query: 210 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 248
VP A + P ++ +M +PG SGM
Sbjct: 299 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 325
>gi|116175255|ref|NP_001070683.1| regulator of differentiation 1 [Sus scrofa]
gi|115371761|gb|ABI96205.1| ROD1 [Sus scrofa]
Length = 523
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 140 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 199
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 200 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 256
Query: 171 QQPVPMV------GATANQYNGAQ-FAPPP--PEQPMMHQPTAAGWGAVPP 212
+P PM G ++ Y GA FAP P+ + P G GA+ P
Sbjct: 257 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAGLGPGALGP 305
>gi|357623431|gb|EHJ74585.1| putative polypyrimidine tract binding protein [Danaus plexippus]
Length = 621
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 6/139 (4%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL IE+M Y + LDVL+ +F +G V KI F KN QALIQYPD +A +AK A
Sbjct: 242 NTVLRVIIEHMLYPIVLDVLYSIFQRYGKVLKIVTFTKNNSFQALIQYPDTGSAQMAKTA 301
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP-SILGQQPVPMV 177
L+G IY+G C L I YS+ T L++K NND+SRDYT P+ P + +L + +P+
Sbjct: 302 LDGQNIYNGC-CTLRIDYSKMTCLNVKYNNDKSRDYTNPTLPSGDGDAHQLLTSELMPLR 360
Query: 178 G----ATANQYNGAQFAPP 192
A++ +G APP
Sbjct: 361 AHLALNLASRMSGGVLAPP 379
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLRI YS T L+VK+ + +SRDYTNP LP
Sbjct: 310 GCCTLRIDYSKMTCLNVKYNNDKSRDYTNPTLP 342
>gi|326934420|ref|XP_003213288.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Meleagris
gallopavo]
Length = 526
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 144 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMS 203
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P ++QP L Q
Sbjct: 204 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPP-LDQ 261
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA A+ Y GA F P
Sbjct: 262 TMAAAFGAPGIIPASPYAGAGFPP 285
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 221 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 251
>gi|344293564|ref|XP_003418492.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Loxodonta
africana]
Length = 686
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 326 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 385
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 386 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 435
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 46/181 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-------- 43
CTLRI +S +L+VK+ + +SRDYT P LP A A + S
Sbjct: 397 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAA 456
Query: 44 --GQLS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 83
G LS VG+ G + +L++++ + VT L +F
Sbjct: 457 VPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFG 514
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+G VQ++ + N ALIQ D + +A L G +Y + ++ S+H +
Sbjct: 515 VYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMYGK---IIRVTLSKHQTVQ 570
Query: 144 I 144
+
Sbjct: 571 L 571
>gi|148670262|gb|EDL02209.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Mus
musculus]
Length = 590
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 197 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 256
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 257 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 315
Query: 159 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMP 218
P + QPS+ E PM AA +GA P S P
Sbjct: 316 LPTGDGQPSL--------------------------EPPM-----AAAFGA--PGIMSSP 342
Query: 219 MMGNHPYMPPGSMPMGPGMMQMHMPGQSG 247
G + P + P G+ +PG G
Sbjct: 343 YAGAAGFAPAIAFPQAAGLSVPAVPGALG 371
>gi|426216016|ref|XP_004002265.1| PREDICTED: polypyrimidine tract-binding protein 2 [Ovis aries]
Length = 510
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 150 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 209
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 210 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 259
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 44/172 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-------- 43
CTLRI +S +L+VK+ + +SRDYT P LP A A + S
Sbjct: 221 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAA 280
Query: 44 --GQLS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 83
G LS VG+ G + +L++++ + VT L +F
Sbjct: 281 VPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFG 338
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
+G VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 339 VYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 388
>gi|73959499|ref|XP_866820.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4 [Canis
lupus familiaris]
gi|119593416|gb|EAW73010.1| polypyrimidine tract binding protein 2, isoform CRA_f [Homo
sapiens]
Length = 480
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 125 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 184
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 185 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 234
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 196 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 255
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 256 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 313
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 314 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 358
>gi|402855348|ref|XP_003892288.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Papio
anubis]
Length = 506
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 206 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 255
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 44/172 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-------- 43
CTLRI +S +L+VK+ + +SRDYT P LP A A + S
Sbjct: 217 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAA 276
Query: 44 --GQLS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 83
G LS VG+ G + +L++++ + VT L +F
Sbjct: 277 VPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFG 334
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
+G VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 335 VYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 384
>gi|440902651|gb|ELR53420.1| Polypyrimidine tract-binding protein 2, partial [Bos grunniens
mutus]
Length = 524
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 164 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 223
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 224 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 273
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 44/172 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-------- 43
CTLRI +S +L+VK+ + +SRDYT P LP A A + S
Sbjct: 235 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAA 294
Query: 44 --GQLS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 83
G LS VG+ G + +L++++ + VT L +F
Sbjct: 295 VPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFG 352
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
+G VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 353 VYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 402
>gi|194389558|dbj|BAG61740.1| unnamed protein product [Homo sapiens]
Length = 548
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 248 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 297
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 44/172 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-------- 43
CTLRI +S +L+VK+ + +SRDYT P LP A A + S
Sbjct: 259 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAA 318
Query: 44 --GQLS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 83
G LS VG+ G + +L++++ + VT L +F
Sbjct: 319 VPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFG 376
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
+G VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 377 VYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 426
>gi|255003709|ref|NP_659153.2| polypyrimidine tract-binding protein 3 isoform 1 [Mus musculus]
Length = 551
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 158 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 217
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 218 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 276
Query: 159 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 209
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 277 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 326
Query: 210 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 248
VP A + P ++ +M +PG SGM
Sbjct: 327 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 353
>gi|115464105|ref|NP_001055652.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|113579203|dbj|BAF17566.1| Os05g0437300 [Oryza sativa Japonica Group]
gi|215734982|dbj|BAG95704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196864|gb|EEC79291.1| hypothetical protein OsI_20097 [Oryza sativa Indica Group]
gi|222631716|gb|EEE63848.1| hypothetical protein OsJ_18672 [Oryza sativa Japonica Group]
Length = 444
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQNSHGRNSDQESEPNRILLVTIHHMMYPITVEVLHQVFKAYGYVE 131
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQY +Q A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQYQSLQEAMDAFGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 44/196 (22%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------------------- 36
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 169 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQGYPDPGGLYAFQQPGAS 228
Query: 37 ------PSAIDAS--GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
+ I A+ G L G+ G E L+ S N + D L +FS +G +
Sbjct: 229 YAQMGRAAMITAAFGGTLPPGVTGTN---ERCTLIVSNLNTD-KINEDKLFNLFSLYGNI 284
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 148
+I + +N AL++ D A +A L+G ++ KL ++YS++ +++ +
Sbjct: 285 VRIKIL-RNKPDHALVEMADGFQAELAVHYLKGAVLFAK---KLEVNYSKYPNITSAPD- 339
Query: 149 DRSRDYTLPSTPMVNS 164
+ DYT S NS
Sbjct: 340 --AHDYTTSSLNRFNS 353
>gi|354504008|ref|XP_003514071.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Cricetulus
griseus]
Length = 501
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 206 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 255
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 217 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 276
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 277 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 334
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 335 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 379
>gi|351704481|gb|EHB07400.1| Polypyrimidine tract-binding protein 2 [Heterocephalus glaber]
Length = 539
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 278
>gi|281349698|gb|EFB25282.1| hypothetical protein PANDA_003123 [Ailuropoda melanoleuca]
Length = 501
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 141 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 200
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 201 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 250
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 44/172 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-------- 43
CTLRI +S +L+VK+ + +SRDYT P LP A A + S
Sbjct: 212 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAA 271
Query: 44 --GQLS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 83
G LS VG+ G + +L++++ + VT L +F
Sbjct: 272 VPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFG 329
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
+G VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 330 VYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 379
>gi|332809593|ref|XP_003308280.1| PREDICTED: polypyrimidine tract-binding protein 2 [Pan troglodytes]
gi|397474051|ref|XP_003808504.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3 [Pan
paniscus]
Length = 548
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 248 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 297
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 44/172 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-------- 43
CTLRI +S +L+VK+ + +SRDYT P LP A A + S
Sbjct: 259 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAA 318
Query: 44 --GQLS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 83
G LS VG+ G + +L++++ + VT L +F
Sbjct: 319 VPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFG 376
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
+G VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 377 VYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 426
>gi|148670263|gb|EDL02210.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Mus
musculus]
Length = 556
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 163 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 222
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 223 QFQALLQYADPVNAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 281
Query: 159 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 209
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 282 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 331
Query: 210 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 248
VP A + P ++ +M +PG SGM
Sbjct: 332 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 358
>gi|431896401|gb|ELK05813.1| Polypyrimidine tract-binding protein 2 [Pteropus alecto]
Length = 485
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 125 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 184
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 185 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 234
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 44/172 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-------- 43
CTLRI +S +L+VK+ + +SRDYT P LP A A + S
Sbjct: 196 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAA 255
Query: 44 --GQLS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 83
G LS VG+ G + +L++++ + VT L +F
Sbjct: 256 VPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFG 313
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
+G VQ++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 314 VYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 363
>gi|426330458|ref|XP_004026228.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 3
[Gorilla gorilla gorilla]
Length = 548
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 188 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 247
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 248 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 297
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 259 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 289
>gi|334324359|ref|XP_001381834.2| PREDICTED: polypyrimidine tract-binding protein 2-like [Monodelphis
domestica]
Length = 640
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 280 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 339
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 340 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 389
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 46/176 (26%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-------- 43
CTLRI +S +L+VK+ + +SRDYT P LP A A + S
Sbjct: 351 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAA 410
Query: 44 --GQLS------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFS 83
G LS VG+ G + +L++++ + VT L +F
Sbjct: 411 VPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFG 468
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
+G VQ++ + N ALIQ D + +A L G +Y + ++ S+H
Sbjct: 469 VYGDVQRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMYGK---IIRVTLSKH 520
>gi|170576691|ref|XP_001893730.1| hypothetical protein [Brugia malayi]
gi|158600096|gb|EDP37433.1| conserved hypothetical protein [Brugia malayi]
Length = 645
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 96/175 (54%), Gaps = 19/175 (10%)
Query: 35 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 94
++ SA+D S + +P S VL IENM Y VTLDVLH +FS +G V +I F
Sbjct: 398 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITF 449
Query: 95 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 450 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGC-CCLRIDYSKLATLNVKYNNDKSRDY 508
Query: 155 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA 209
T P+ P S L QQ + AT G Q P ++ P A +GA
Sbjct: 509 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPTIAS--LVQSPFAFPFGA 553
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 61
G C LRI YS L+VK+ + +SRDYTNP LP ++ L G ++ P
Sbjct: 482 GCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGPTIAS 541
Query: 62 LLAS 65
L+ S
Sbjct: 542 LVQS 545
>gi|268532214|ref|XP_002631235.1| C. briggsae CBR-PTB-1 protein [Caenorhabditis briggsae]
Length = 610
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 16 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTL 75
L ++ +HR + + + A+G +S G + +P S VL IENM + V+L
Sbjct: 184 LFAQYSTHRELKFDKSNKATSDTESVANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSL 242
Query: 76 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
+VLH +F+ +G V +I F+KN QALIQ + +A +AK+ LE +Y+G C L I
Sbjct: 243 EVLHQLFARYGKVLRIITFNKNNTFQALIQMSEANSAQLAKQGLENQNVYNGC-CTLRID 301
Query: 136 YSRHTDLSIKVNNDRSRDYTLPSTP 160
YS+ + L++K NND+SRDYT P+ P
Sbjct: 302 YSKLSTLNVKYNNDKSRDYTNPNLP 326
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLRI YS + L+VK+ + +SRDYTNP LP
Sbjct: 294 GCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 326
>gi|148670261|gb|EDL02208.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Mus
musculus]
Length = 528
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 161 SGNLSLPGATANEGTLLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 220
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 221 QFQALLQYADPVNAQYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 279
Query: 159 TPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWG--A 209
P + QPS+ +P PM G ++ Y GA FAP + P AAG A
Sbjct: 280 LPTGDGQPSL---EP-PMAAAFGAPGIMSSPYAGAAGFAPA------IAFPQAAGLSVPA 329
Query: 210 VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 248
VP A + P ++ +M +PG SGM
Sbjct: 330 VPGA------------LGPLTLTSSAVSGRMAIPGASGM 356
>gi|355558193|gb|EHH14973.1| hypothetical protein EGK_00996, partial [Macaca mulatta]
Length = 529
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 174 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 233
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 234 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 245 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 304
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 305 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 362
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 363 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 407
>gi|291382801|ref|XP_002708166.1| PREDICTED: ROD1 regulator of differentiation 1-like [Oryctolagus
cuniculus]
Length = 1000
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 619 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 678
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 679 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 735
>gi|395821711|ref|XP_003784180.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Otolemur garnettii]
Length = 531
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 89/169 (52%), Gaps = 14/169 (8%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 59
+ I YS H +L ++ + N A+ A S L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQAVLQAVTAVQTASTPLSGTTVSESAVTPAQS 178
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLAL 238
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 239 DGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 308 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|10863997|ref|NP_067013.1| polypyrimidine tract-binding protein 2 [Homo sapiens]
gi|332221969|ref|XP_003260137.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Nomascus leucogenys]
gi|332809589|ref|XP_001157727.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
troglodytes]
gi|345801645|ref|XP_547270.3| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Canis
lupus familiaris]
gi|397474047|ref|XP_003808502.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pan
paniscus]
gi|426330454|ref|XP_004026226.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|74761983|sp|Q9UKA9.1|PTBP2_HUMAN RecName: Full=Polypyrimidine tract-binding protein 2; AltName:
Full=Neural polypyrimidine tract-binding protein;
AltName: Full=Neurally-enriched homolog of PTB; AltName:
Full=PTB-like protein
gi|6492336|gb|AAF14284.1|AF176085_1 neural polypyrimidine tract binding protein [Homo sapiens]
gi|22711855|tpg|DAA00060.1| TPA_exp: splicing regulator nPTB1 [Homo sapiens]
gi|119593411|gb|EAW73005.1| polypyrimidine tract binding protein 2, isoform CRA_a [Homo
sapiens]
gi|380815182|gb|AFE79465.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|384948520|gb|AFI37865.1| polypyrimidine tract-binding protein 2 [Macaca mulatta]
gi|410298260|gb|JAA27730.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 531
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 308 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|395821709|ref|XP_003784179.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1
[Otolemur garnettii]
Length = 540
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 88/167 (52%), Gaps = 14/167 (8%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ESNV 61
I YS H +L ++ + N A+ A S L G + +S V
Sbjct: 136 IQYSNHKEL-------KTDNTLNQRAQAVLQAVTAVQTASTPLSGTTVSESAVTPAQSPV 188
Query: 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
L I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G
Sbjct: 189 LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG 248
Query: 122 HCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 249 QNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 256 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 315
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 316 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 373
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 374 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|355717047|gb|AES05805.1| ROD1 regulator of differentiation 1 [Mustela putorius furo]
Length = 497
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 117 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 176
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 177 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 233
Query: 171 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 213
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 234 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIG----FHQATGLSVPAVPGA 277
>gi|291398459|ref|XP_002715890.1| PREDICTED: polypyrimidine tract binding protein 2 [Oryctolagus
cuniculus]
Length = 536
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 278
>gi|301758643|ref|XP_002915171.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Ailuropoda
melanoleuca]
gi|395730215|ref|XP_002810624.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Pongo
abelii]
gi|22218304|gb|AAM94624.1| non-neuronal splice variant nPTB3 [Homo sapiens]
gi|119593414|gb|EAW73008.1| polypyrimidine tract binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 537
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 278
>gi|332221975|ref|XP_003260140.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 4
[Nomascus leucogenys]
Length = 568
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 208 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 267
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 268 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 317
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 279 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 309
>gi|327270713|ref|XP_003220133.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Anolis
carolinensis]
Length = 531
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + VLL S N + VT L +F +G V
Sbjct: 308 SPLGIPNAAAAAAAAAAGRVGMPGVS-SGGNTVLLVSNLN-EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|297270365|ref|XP_001099980.2| PREDICTED: regulator of differentiation 1-like [Macaca mulatta]
Length = 860
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 479 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 538
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 539 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 595
>gi|301781136|ref|XP_002925987.1| PREDICTED: regulator of differentiation 1-like [Ailuropoda
melanoleuca]
Length = 567
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 186 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGAVLKIITFTKNNQFQALLQYADPV 245
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 246 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 302
Query: 171 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 213
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 303 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIG----FHQATGLSVPAVPGA 346
>gi|355745467|gb|EHH50092.1| hypothetical protein EGM_00861, partial [Macaca fascicularis]
Length = 529
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 174 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 233
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 234 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 283
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 245 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 304
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 305 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 362
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 363 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 407
>gi|326925087|ref|XP_003208753.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Meleagris
gallopavo]
Length = 531
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 308 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|194389592|dbj|BAG61757.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 244
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 256 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 315
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 316 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 373
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 374 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|297279324|ref|XP_001105316.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 6
[Macaca mulatta]
gi|22218306|gb|AAM94625.1| non-neuronal splice variant nPTB4 [Homo sapiens]
gi|119593412|gb|EAW73006.1| polypyrimidine tract binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 536
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 278
>gi|403283993|ref|XP_003933374.1| PREDICTED: polypyrimidine tract-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 222 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 281
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 282 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 331
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 293 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 352
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 353 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 410
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 411 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 455
>gi|345801647|ref|XP_003434832.1| PREDICTED: polypyrimidine tract-binding protein 2 [Canis lupus
familiaris]
Length = 540
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 244
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 256 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 315
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 316 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 373
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 374 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|118094291|ref|XP_422322.2| PREDICTED: polypyrimidine tract-binding protein 2 [Gallus gallus]
Length = 531
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 308 SPLAIPNAAAAAAAAAAGRVGMPGVSASGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|16580749|dbj|BAB71742.1| PTB-like protein L [Homo sapiens]
gi|16741546|gb|AAH16582.1| Polypyrimidine tract binding protein 2 [Homo sapiens]
gi|119593413|gb|EAW73007.1| polypyrimidine tract binding protein 2, isoform CRA_c [Homo
sapiens]
gi|123980248|gb|ABM81953.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|157928112|gb|ABW03352.1| polypyrimidine tract binding protein 2 [synthetic construct]
gi|410216174|gb|JAA05306.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
gi|410328831|gb|JAA33362.1| polypyrimidine tract binding protein 2 [Pan troglodytes]
Length = 532
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 308 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 410
>gi|281345981|gb|EFB21565.1| hypothetical protein PANDA_015565 [Ailuropoda melanoleuca]
Length = 444
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 132 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGAVLKIITFTKNNQFQALLQYADPV 191
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 192 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 248
Query: 171 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 213
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 249 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIG----FHQATGLSVPAVPGA 292
>gi|338725424|ref|XP_001490156.3| PREDICTED: polypyrimidine tract-binding protein 2 [Equus caballus]
gi|402855346|ref|XP_003892287.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 1 [Papio
anubis]
gi|194379976|dbj|BAG58340.1| unnamed protein product [Homo sapiens]
Length = 325
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 205
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 206 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 255
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 217 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 247
>gi|345306392|ref|XP_001508115.2| PREDICTED: polypyrimidine tract-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 606
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 251 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 310
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 311 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 360
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 322 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 381
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VGL G + +L++++ + VT L +F +G V
Sbjct: 382 SPLAIPNAAAAAAAAAAGRVGLPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 439
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 440 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 484
>gi|297279326|ref|XP_001105013.2| PREDICTED: polypyrimidine tract-binding protein 2-like isoform 2
[Macaca mulatta]
gi|332809591|ref|XP_001158089.2| PREDICTED: polypyrimidine tract-binding protein 2 isoform 7 [Pan
troglodytes]
gi|395730217|ref|XP_003775687.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pongo
abelii]
gi|397474049|ref|XP_003808503.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2 [Pan
paniscus]
gi|426330456|ref|XP_004026227.1| PREDICTED: polypyrimidine tract-binding protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 540
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 244
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 294
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 256 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 315
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 316 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 373
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 374 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 418
>gi|16580751|dbj|BAB71743.1| PTB-like protein S [Homo sapiens]
gi|119593415|gb|EAW73009.1| polypyrimidine tract binding protein 2, isoform CRA_e [Homo
sapiens]
Length = 356
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 236
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 237 ALDGQNIYN-ACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 278
>gi|395535423|ref|XP_003769725.1| PREDICTED: polypyrimidine tract-binding protein 2 [Sarcophilus
harrisii]
Length = 494
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+
Sbjct: 142 VLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALD 201
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 202 GQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 248
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 210 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 269
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 270 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 327
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 328 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 372
>gi|345777899|ref|XP_538790.3| PREDICTED: regulator of differentiation 1 [Canis lupus familiaris]
Length = 610
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 93/170 (54%), Gaps = 16/170 (9%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 229 EGTILPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 288
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 289 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL-- 345
Query: 171 QQPVPMV------GATANQYNGAQ-FAPPPPEQPMMHQPTAAGWGAVPPA 213
+P PM G ++ Y GA FAP HQ T AVP A
Sbjct: 346 -EP-PMAAAFGAPGIISSPYAGAAGFAPAIG----FHQATGISVPAVPGA 389
>gi|118404352|ref|NP_001072479.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
gi|112418598|gb|AAI21904.1| polypyrimidine tract binding protein 2 [Xenopus (Silurana)
tropicalis]
Length = 531
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+
Sbjct: 180 VLRIIIDNMYYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALD 239
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 240 GQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 286
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 248 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 307
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + V+ L +F +G V
Sbjct: 308 SPLGIPNAAAAAAAAAASRVGMHGVSTGGNTVLLVSNLN--EEMVSPQSLFTLFGVYGDV 365
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 366 QRVKIL-YNKKDSALIQMADGNQSQLAMSHLNGQKMY-GKIIRVTLS 410
>gi|410043023|ref|XP_003951547.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 554
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
>gi|321470924|gb|EFX81898.1| hypothetical protein DAPPUDRAFT_302853 [Daphnia pulex]
Length = 540
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E+M Y VTLDVL +FS G V KI F KN QALIQYPDV TA AK
Sbjct: 165 NTVLRVIVEHMVYPVTLDVLFQIFSKVGRVLKIVTFTKNNTFQALIQYPDVVTAQAAKLT 224
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 225 LDGQNIYNSC-CTLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 265
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA 42
CTLRI YS + L+VK+ + +SRDYTNP LP +DA
Sbjct: 235 CTLRIEYSKLSSLNVKYNNDKSRDYTNPTLPTGDHNLDA 273
>gi|340375863|ref|XP_003386453.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Amphimedon
queenslandica]
Length = 476
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Query: 47 SVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
+VG+ G +++L IENM Y +T+DVLH +F+ +G V K+ F KN ALIQY
Sbjct: 117 TVGVVGTSQGQPNSILRVIIENMIYPITIDVLHQIFAKYGDVLKVVTFMKNTQFHALIQY 176
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
P+ A AK AL+G IY+G C LHI YS+ ++L++K NN+++RD+T P P
Sbjct: 177 PNEIIATNAKTALDGQNIYNGC-CTLHIDYSKLSNLTVKFNNEKTRDFTRPDLP 229
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 34/169 (20%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP----------------VAPSAID--AS 43
G CTL I YS ++L+VKF + ++RD+T P LP + P+ + A
Sbjct: 197 GCCTLHIDYSKLSNLTVKFNNEKTRDFTRPDLPSGDPEAAPLPDLSAYGLHPAFLQSPAF 256
Query: 44 GQLSVGLDGKKLEPESN---------VLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-M 93
QL L + V+LAS N + ++ L ++F +G V ++ +
Sbjct: 257 AQLRTALTALGGTQGAAGAGVVAPTPVVLASNLNDK-MISPHALFILFGVYGDVMRVKIL 315
Query: 94 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 142
+ K AL+Q+ + Q A A L G +Y KLH++ S+HT +
Sbjct: 316 YSKRDS--ALVQFREAQQAQNAVTHLNGCMLYGK---KLHLTLSKHTQV 359
>gi|25058871|gb|AAH39896.1| Similar to ROD1 regulator of differentiation 1 (S. pombe), partial
[Homo sapiens]
Length = 618
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 214 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 273
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 274 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 330
>gi|356559629|ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
Query: 56 EPESN-VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E E N +LL ++ +M Y +T DVLH VFS G V+KI F K+ G QALIQY Q+AV
Sbjct: 93 EDEPNRILLVTVHHMLYPITADVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVT 152
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV 174
A+ L+G IYDG C+L I +S +L + NNDRSRD+T P+ P G+
Sbjct: 153 ARSTLQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQK-----GRSSQ 206
Query: 175 PMVGATANQYNGAQ 188
P G A Y+GA+
Sbjct: 207 PGYGDAAGMYSGAR 220
>gi|426362704|ref|XP_004048495.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 591
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 180 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 239
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 240 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 296
>gi|90085391|dbj|BAE91436.1| unnamed protein product [Macaca fascicularis]
Length = 352
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 71 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 130
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 131 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 187
>gi|22329999|ref|NP_175010.2| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|145324166|ref|NP_001077672.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|75323651|sp|Q6ICX4.1|PTBP3_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 3
gi|48525347|gb|AAT44975.1| At1g43190 [Arabidopsis thaliana]
gi|50198952|gb|AAT70479.1| At1g43190 [Arabidopsis thaliana]
gi|110737368|dbj|BAF00629.1| hypothetical protein [Arabidopsis thaliana]
gi|332193840|gb|AEE31961.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193841|gb|AEE31962.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 432
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Query: 49 GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
+ G++ EP + +LL +I +M Y +T+DVLH VFS +G V+K+ F K+ G QALIQY
Sbjct: 89 NIHGREDEP-NRILLVTIHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQV 147
Query: 109 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
Q A A+ AL+G IYDG C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 148 QQCAASARTALQGRNIYDGC-CQLDIQFSNLEELQVNYNNDRSRDYTNPNLP 198
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 32/166 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA----------------------PSA 39
G C L I +S +L V + + RSRDYTNP LP SA
Sbjct: 166 GCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSA 225
Query: 40 IDAS--GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
I A+ G L G+ G VL++++ ++ D L +FS +G + +I + +N
Sbjct: 226 IAAAFGGGLPPGITGTN--DRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RN 280
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 281 KPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 323
>gi|349732190|ref|NP_001231826.1| polypyrimidine tract-binding protein 3 isoform 5 [Homo sapiens]
Length = 547
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
>gi|145324168|ref|NP_001077673.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
gi|332193842|gb|AEE31963.1| polypyrimidine tract-binding protein 3 [Arabidopsis thaliana]
Length = 430
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Query: 49 GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
+ G++ EP + +LL +I +M Y +T+DVLH VFS +G V+K+ F K+ G QALIQY
Sbjct: 87 NIHGREDEP-NRILLVTIHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQV 145
Query: 109 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
Q A A+ AL+G IYDG C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 146 QQCAASARTALQGRNIYDGC-CQLDIQFSNLEELQVNYNNDRSRDYTNPNLP 196
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 32/166 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA----------------------PSA 39
G C L I +S +L V + + RSRDYTNP LP SA
Sbjct: 164 GCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSA 223
Query: 40 IDAS--GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
I A+ G L G+ G VL++++ ++ D L +FS +G + +I + +N
Sbjct: 224 IAAAFGGGLPPGITGTN--DRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RN 278
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 279 KPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 321
>gi|340726548|ref|XP_003401618.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
terrestris]
Length = 578
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Query: 18 VKFQSHRS--RDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN-VLLASIENMQYAVT 74
V+F +HR D T+ + S + GQ V + + N VL +E M Y ++
Sbjct: 144 VQFSNHRELKTDQTHTNNANSNSQVTLPGQNQVAQTQAETQGGPNTVLRVIVEQMVYPIS 203
Query: 75 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134
LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +LEG IY+ C L I
Sbjct: 204 LDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLSLEGQNIYN-SCCTLRI 262
Query: 135 SYSRHTDLSIKVNNDRSRDYTLPSTP 160
YS+ +L++K NND+SRDYT PS P
Sbjct: 263 DYSKMQNLNVKYNNDKSRDYTNPSLP 288
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 55
CTLRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 258 CTLRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 306
>gi|395750059|ref|XP_003779055.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1 [Pongo abelii]
Length = 782
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 84/144 (58%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 399 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 458
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P QP++
Sbjct: 459 AQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS-GRQPALAWD 516
Query: 172 Q---PVPMVGA-TANQYNGAQFAP 191
Q P P +A+ Y GA F P
Sbjct: 517 QNHGPRPXXXXISASPYAGAGFPP 540
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 476 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 506
>gi|324504709|gb|ADY42030.1| Regulator of differentiation 1 [Ascaris suum]
Length = 560
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 83/141 (58%), Gaps = 5/141 (3%)
Query: 43 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 102
S L + + +P S VL IENM Y VTLDVLH +FS +G V +I F+KN QA
Sbjct: 138 SSALDISASCTQQQPNS-VLRVIIENMLYPVTLDVLHQIFSRYGKVLRIITFNKNNTFQA 196
Query: 103 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV 162
L+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDYT P+ P
Sbjct: 197 LVQLSEATSAQMARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDYTNPNLP-- 253
Query: 163 NSQPSILGQQPVPMVGATANQ 183
S L QQ + AT Q
Sbjct: 254 -SGELTLEQQLSLVSAATGGQ 273
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 61
G C LRI YS L+VK+ + +SRDYTNP LP ++ L G ++ P
Sbjct: 221 GCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGPAIAS 280
Query: 62 LLAS 65
L+ S
Sbjct: 281 LVQS 284
>gi|297852124|ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339785|gb|EFH70202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 432
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Query: 49 GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
+ G++ EP + +LL +I +M Y +T+DVLH VFS +G V+K+ F K+ G QALIQY
Sbjct: 89 NIHGREDEP-NRILLVTIHHMLYPITVDVLHQVFSPYGFVEKLVTFQKSAGFQALIQYQV 147
Query: 109 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
Q A A+ AL+G IYDG C+L I +S +L + NNDRSRDYT P+ P
Sbjct: 148 QQCAASARTALQGRNIYDGC-CQLDIQFSNLEELQVNYNNDRSRDYTNPNLP 198
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 32/166 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA----------------------PSA 39
G C L I +S +L V + + RSRDYTNP LP SA
Sbjct: 166 GCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPGYGDVGVAYPQMANTSA 225
Query: 40 IDAS--GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
I A+ G L G+ G VL++++ ++ D L +FS +G + +I + +N
Sbjct: 226 IAAAFGGGLPPGITGTN--DRCTVLVSNLN--ADSIDEDKLFNLFSLYGNIVRIKLL-RN 280
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 281 KPDHALVQMGDGFQAELAVHFLKGAVLFGK---RLEVNFSKHPNIT 323
>gi|170028938|ref|XP_001842351.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167879401|gb|EDS42784.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 535
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LD+L+ +F FG V KI F KN QALIQYPD TA AK+
Sbjct: 148 NTVLRVIVESLLYPVSLDILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQT 207
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ G C L I S+ T L++K NND+SRDYT P+ P
Sbjct: 208 LDGQNIYN-GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 248
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID----ASGQLSVG 49
G CTLRI S T L+VK+ + +SRDYTNP LP D A G +S G
Sbjct: 216 GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLPSGEPGSDVIASAGGLVSAG 267
>gi|441622594|ref|XP_003264050.2| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 3 isoform 1 [Nomascus leucogenys]
Length = 555
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 8 ITYSAHTDLSVKF--QSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 65
I YS H +L R++D V ++ SG S +G L +S VL
Sbjct: 131 IQYSNHRELKTDNLPNQARAQDALQAVSAVQSGSLALSGGRSN--EGTVLPGQSPVLXII 188
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
IEN+ Y TL+VLH +FS FG V KI F KN QAL+QY D A AK AL+G IY
Sbjct: 189 IENLFYRGTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIY 248
Query: 126 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 249 N-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
>gi|432103873|gb|ELK30706.1| Polypyrimidine tract-binding protein 2 [Myotis davidii]
Length = 538
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL I+NM Y VTLDVLH +F+ FG V KI F KN QAL+QY D A AK
Sbjct: 143 QSPVLRIIIDNMYYPVTLDVLHQIFTKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKL 202
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 203 ALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 252
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 214 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 244
>gi|354486792|ref|XP_003505562.1| PREDICTED: regulator of differentiation 1-like [Cricetulus griseus]
Length = 643
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 262 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 321
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 322 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 378
>gi|349732186|ref|NP_001231825.1| polypyrimidine tract-binding protein 3 isoform 4 [Homo sapiens]
gi|332832555|ref|XP_001149256.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
troglodytes]
Length = 457
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 76 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 135
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 136 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 192
>gi|170042024|ref|XP_001848742.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
gi|167865565|gb|EDS28948.1| polypyrimidine tract binding protein [Culex quinquefasciatus]
Length = 572
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 8/162 (4%)
Query: 5 TLRITYSAHTDLSVKFQSHRSRDYT-NPYLPVAPSAIDASGQLSVGLDGKKLEPE----- 58
T+ + +S H +L Q+H + D T +P P A+D + S
Sbjct: 90 TVYVQFSNHRELKTD-QNHTATDLTQSPTGSPLPLALDHANTNSTTAGTGANVGGNAGGP 148
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LD+L+ +F FG V KI F KN QALIQYPD TA AK+
Sbjct: 149 NTVLRVIVESLLYPVSLDILYQIFQRFGKVLKIVTFTKNNSFQALIQYPDATTAQHAKQT 208
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+G C L I S+ T L++K NND+SRDYT P+ P
Sbjct: 209 LDGQNIYNGC-CTLRIDNSKLTSLNVKYNNDKSRDYTNPTLP 249
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID----ASGQLSVG 49
G CTLRI S T L+VK+ + +SRDYTNP LP D A G +S G
Sbjct: 217 GCCTLRIDNSKLTSLNVKYNNDKSRDYTNPTLPSGEPGSDVIASAGGLVSAG 268
>gi|198435860|ref|XP_002127727.1| PREDICTED: similar to polypyrimidine tract binding protein 1 [Ciona
intestinalis]
Length = 516
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL A IENM Y +TLDVLH +FS FG + KI F K+ QALIQ D + AK +L+
Sbjct: 147 VLRAVIENMLYPITLDVLHTIFSKFGVILKIITFTKSSQFQALIQMADALQSQTAKLSLD 206
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
G IY+G C L I YS+ + L++K NND+SRDYT P + + SILG G+T
Sbjct: 207 GQNIYNGC-CTLRIEYSKLSSLNVKFNNDKSRDYTRNDLP--SGEASILG------TGST 257
Query: 181 A-NQYNGAQFAPPPPEQPM---MHQPTAAGWGAVPPASQSMP---MMGNHPYM 226
+ GA P P + + + Q A A Q + M GN +M
Sbjct: 258 LQSMLGGAGLMPSPYQNNIAAAIQQSQLASLANASGALQHLTGTNMAGNSNHM 310
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 74/192 (38%), Gaps = 56/192 (29%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ-LSVGLDGKKL--EPE 58
G CTLRI YS + L+VKF + +SRDYT LP ++I +G L L G L P
Sbjct: 213 GCCTLRIEYSKLSSLNVKFNNDKSRDYTRNDLPSGEASILGTGSTLQSMLGGAGLMPSPY 272
Query: 59 SNVLLASIENMQYA---------------------------------------------- 72
N + A+I+ Q A
Sbjct: 273 QNNIAAAIQQSQLASLANASGALQHLTGTNMAGNSNHMVTQLAAMVGQTSVLHVSNLNEE 332
Query: 73 -VTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC 130
VT L ++F +G V ++ M+ K AL+Q D Q A + L G +YD
Sbjct: 333 MVTPQSLFILFGVYGDVNRVKIMYQKKSN--ALVQMNDHQQAQTVIKYLHGVKLYDR--- 387
Query: 131 KLHISYSRHTDL 142
L I SRH +
Sbjct: 388 PLQIMMSRHNQV 399
>gi|119579506|gb|EAW59102.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_c [Homo
sapiens]
Length = 482
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 101 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 160
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 161 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 217
>gi|410928343|ref|XP_003977560.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Takifugu
rubripes]
Length = 534
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
S+VL +EN+ Y V+LD L +FS FG V +I +F KN QAL+QYPD A AK +
Sbjct: 158 SSVLRVVVENLLYPVSLDALCQIFSKFGTVLRIIVFTKNSQFQALLQYPDAACAQAAKLS 217
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L+G IY+ C L IS+S+ T L++K NN++SRD+T P P + QP++
Sbjct: 218 LDGQNIYNAC-CTLRISFSKLTSLNVKYNNEKSRDFTRPDLPPGDGQPTLEHPSMAAAFA 276
Query: 179 A----TANQYNGA--QFAPPPPEQPMMHQPTA-AGWGAVPPASQSMPMMG----NHPYMP 227
A +A Y GA F+P QP + P A A+P A S+ + G P +P
Sbjct: 277 APGIISAAPYAGAAQTFSPSYTIQPAVFLPPAGVTVPALPGALTSLSLAGAARMGFPSLP 336
Query: 228 PG 229
G
Sbjct: 337 AG 338
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI++S T L+VK+ + +SRD+T P LP
Sbjct: 228 CTLRISFSKLTSLNVKYNNEKSRDFTRPDLP 258
>gi|390458239|ref|XP_003732081.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Callithrix jacchus]
Length = 524
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
>gi|393904664|gb|EJD73763.1| polypyrimidine tract-binding protein 1 [Loa loa]
Length = 546
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 35 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 94
++ SA+D S + +P S VL IENM Y VTLDVL+ +FS +G V +I F
Sbjct: 126 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLYQIFSRYGKVLRIITF 177
Query: 95 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 178 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 236
Query: 155 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 212
T P+ P S L QQ + AT G Q P ++ P A +GA P
Sbjct: 237 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPAIAS--LVQSPFAFPFGAANP 284
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP 57
G C LRI YS L+VK+ + +SRDYTNP LP ++ L G ++ P
Sbjct: 210 GCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLPSGELTLEQQLSLVSAATGGQMGP 265
>gi|115441273|ref|NP_001044916.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|113534447|dbj|BAF06830.1| Os01g0867800 [Oryza sativa Japonica Group]
gi|215697244|dbj|BAG91238.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 439
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 6/142 (4%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N YL + + Q S G + + EP + +LL +I +M Y +T++VLH VFS +G V+
Sbjct: 68 NVYLQYSSHQELTTDQSSHGRNPDQEEP-NRILLVTIHHMLYPITIEVLHQVFSPYGFVE 126
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G Q LIQY Q+A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 127 KIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 185
Query: 150 RSRDYTLPSTPM----VNSQPS 167
RSRD+T PS P +SQPS
Sbjct: 186 RSRDFTNPSLPTEQRSRSSQPS 207
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 83/193 (43%), Gaps = 38/193 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------PSAI-------DA 42
G C L I YS ++L V + + RSRD+TNP LP PS++ D
Sbjct: 164 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRSRSSQPSYNDPSSLFGFQQPGDP 223
Query: 43 SGQLS-----VGLDGKKLEP------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI 91
Q+S G L P + LL S N + D L +FS +G + +I
Sbjct: 224 YAQMSKAAMIAAAFGGTLPPGVSGINDRCTLLVSNLNTD-KIDEDKLFNLFSMYGNIVRI 282
Query: 92 AMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRS 151
+ KN ALIQ D A +A L+G ++ KL ++YS++ ++ + +
Sbjct: 283 KIL-KNKPDHALIQMADGLQAELAVLYLKGAMLFGK---KLEVNYSKYPTVTADPD---A 335
Query: 152 RDYTLPSTPMVNS 164
RDY+ NS
Sbjct: 336 RDYSTSHLNRFNS 348
>gi|344244560|gb|EGW00664.1| Regulator of differentiation 1 [Cricetulus griseus]
Length = 523
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG LS+ +G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN
Sbjct: 130 SGNLSLPGAPSNEGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNN 189
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 190 QFQALLQYADPLNAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 248
Query: 159 TPMVNSQPSI 168
P + QPS+
Sbjct: 249 LPTGDGQPSL 258
>gi|355753108|gb|EHH57154.1| hypothetical protein EGM_06734, partial [Macaca fascicularis]
Length = 539
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 158 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 217
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 218 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 274
>gi|380801045|gb|AFE72398.1| regulator of differentiation 1 isoform 1, partial [Macaca mulatta]
Length = 456
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 75 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 134
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 135 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 191
>gi|297685129|ref|XP_002820148.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pongo
abelii]
Length = 558
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
>gi|402896665|ref|XP_003911411.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Papio
anubis]
Length = 521
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 140 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 199
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 200 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 256
>gi|355567525|gb|EHH23866.1| hypothetical protein EGK_07422, partial [Macaca mulatta]
Length = 558
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
>gi|255003738|ref|NP_001157260.1| polypyrimidine tract-binding protein 3 isoform 2 [Homo sapiens]
gi|397479181|ref|XP_003810906.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Pan
paniscus]
gi|410043017|ref|XP_003951545.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
gi|194380114|dbj|BAG63824.1| unnamed protein product [Homo sapiens]
Length = 524
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
>gi|296190586|ref|XP_002743247.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1
[Callithrix jacchus]
Length = 558
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
>gi|349732192|ref|NP_001231827.1| polypyrimidine tract-binding protein 3 isoform 6 [Homo sapiens]
gi|114626184|ref|XP_001149612.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 5 [Pan
troglodytes]
gi|397479183|ref|XP_003810907.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pan
paniscus]
gi|27882560|gb|AAH44585.1| ROD1 protein [Homo sapiens]
gi|119579503|gb|EAW59099.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_a [Homo
sapiens]
Length = 558
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
>gi|426362706|ref|XP_004048496.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
gi|4514554|dbj|BAA75466.1| Rod1 [Homo sapiens]
Length = 521
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 140 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 199
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 200 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 256
>gi|403266191|ref|XP_003925277.1| PREDICTED: polypyrimidine tract-binding protein 3 [Saimiri
boliviensis boliviensis]
Length = 558
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
>gi|402896661|ref|XP_003911409.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 1 [Papio
anubis]
Length = 524
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
>gi|343959136|dbj|BAK63423.1| regulator of differentiation 1 [Pan troglodytes]
Length = 524
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
>gi|410043020|ref|XP_003951546.1| PREDICTED: polypyrimidine tract-binding protein 3 [Pan troglodytes]
Length = 558
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 237 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 293
>gi|312097472|ref|XP_003148986.1| hypothetical protein LOAG_13430 [Loa loa]
Length = 255
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 19/178 (10%)
Query: 35 VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 94
++ SA+D S + +P S VL IENM Y VTLDVL+ +FS +G V +I F
Sbjct: 19 ISASALDISA-------CTQQQPNS-VLRVIIENMLYPVTLDVLYQIFSRYGKVLRIITF 70
Query: 95 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
+KN QAL+Q + +A +A+++L+G +Y+G C L I YS+ L++K NND+SRDY
Sbjct: 71 NKNNTFQALVQLSEANSAQLARQSLDGQNVYNGCCC-LRIDYSKLATLNVKYNNDKSRDY 129
Query: 155 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 212
T P+ P S L QQ + AT G Q P ++ P A +GA P
Sbjct: 130 TNPNLP---SGELTLEQQLSLVSAAT-----GGQMGPAIAS--LVQSPFAFPFGAANP 177
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C LRI YS L+VK+ + +SRDYTNP LP
Sbjct: 103 GCCCLRIDYSKLATLNVKYNNDKSRDYTNPNLP 135
>gi|25146811|ref|NP_741041.1| Protein PTB-1, isoform a [Caenorhabditis elegans]
gi|20338920|emb|CAA85411.3| Protein PTB-1, isoform a [Caenorhabditis elegans]
Length = 615
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 13/156 (8%)
Query: 5 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLA 64
TL YS H +L KF +++ ++ + A+G +S G + +P S VL
Sbjct: 187 TLFAQYSTHREL--KFDKNKA---------ISDTESVANGSVSNFEVGTQQQPNS-VLRT 234
Query: 65 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 124
IENM + V+LDVL+ +F+ +G V +I F+KN QAL+Q + +A +AK+ LE +
Sbjct: 235 IIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNV 294
Query: 125 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
Y+G C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 295 YNGC-CTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 329
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 48
G CTLRI YS + L+VK+ + +SRDYTNP LP ++ + +S+
Sbjct: 297 GCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMSI 343
>gi|395740821|ref|XP_002820150.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pongo
abelii]
Length = 524
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 202
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 203 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 259
>gi|402896663|ref|XP_003911410.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Papio
anubis]
Length = 555
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 174 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 233
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 234 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
>gi|218189437|gb|EEC71864.1| hypothetical protein OsI_04570 [Oryza sativa Indica Group]
Length = 443
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 6/142 (4%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N YL + + Q S G + + EP + +LL +I +M Y +T++VLH VFS +G V+
Sbjct: 72 NVYLQYSSHQELTTDQSSHGRNPDQEEP-NRILLVTIHHMLYPITIEVLHQVFSPYGFVE 130
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G Q LIQY Q+A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 131 KIVTFQKSAGFQTLIQYQSRQSAIQAYGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 189
Query: 150 RSRDYTLPSTPM----VNSQPS 167
RSRD+T PS P +SQPS
Sbjct: 190 RSRDFTNPSLPTEQRSRSSQPS 211
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 83/193 (43%), Gaps = 38/193 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------PSAI-------DA 42
G C L I YS ++L V + + RSRD+TNP LP PS++ D
Sbjct: 168 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRSRSSQPSYNDPSSLFGFQQPGDP 227
Query: 43 SGQLS-----VGLDGKKLEP------ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI 91
Q+S G L P + LL S N + D L +FS +G + +I
Sbjct: 228 YAQMSKAAMIAAAFGGTLPPGVSGINDRCTLLVSNLNTD-KIDEDKLFNLFSMYGNIVRI 286
Query: 92 AMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRS 151
+ KN ALIQ D A +A L+G ++ KL ++YS++ ++ + +
Sbjct: 287 KIL-KNKPDHALIQMADGLQAELAVLYLKGAMLFGK---KLEVNYSKYPTVTADPD---A 339
Query: 152 RDYTLPSTPMVNS 164
RDY+ NS
Sbjct: 340 RDYSTSHLNRFNS 352
>gi|395824362|ref|XP_003785435.1| PREDICTED: polypyrimidine tract-binding protein 3 [Otolemur
garnettii]
Length = 534
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 153 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 212
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 213 NAHYAKMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 269
>gi|38569466|ref|NP_005147.3| polypyrimidine tract-binding protein 3 isoform 1 [Homo sapiens]
gi|218511814|sp|O95758.2|PTBP3_HUMAN RecName: Full=Polypyrimidine tract-binding protein 3; AltName:
Full=Regulator of differentiation 1; Short=Rod1
gi|119579504|gb|EAW59100.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
gi|119579505|gb|EAW59101.1| ROD1 regulator of differentiation 1 (S. pombe), isoform CRA_b [Homo
sapiens]
Length = 552
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 171 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 230
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 231 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 287
>gi|357126039|ref|XP_003564696.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Brachypodium distachyon]
Length = 443
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N YL + + Q S G + + EP + +LL ++ +M Y +T++VLH VFS +G V+
Sbjct: 72 NVYLQYSSHQELTTDQSSHGRNPDQDEP-NRILLVTVHHMLYPMTVEVLHQVFSPYGFVE 130
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K G QALIQY Q+A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 131 KIVTFQKTAGFQALIQYQSRQSAIQACGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 189
Query: 150 RSRDYTLPSTPMVNSQPS 167
RSRD+T PS P Q S
Sbjct: 190 RSRDFTNPSLPTEQRQRS 207
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 168 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 200
>gi|383854460|ref|XP_003702739.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Megachile
rotundata]
Length = 552
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +
Sbjct: 87 NTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNSTFQALIQYADMLSAQTAKLS 146
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 147 LEGQNIYNSC-CTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 187
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 55
CTLRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 157 CTLRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 205
>gi|255003744|ref|NP_001157262.1| polypyrimidine tract-binding protein 3 isoform 3 [Homo sapiens]
gi|114626182|ref|XP_528390.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 6 [Pan
troglodytes]
gi|397479185|ref|XP_003810908.1| PREDICTED: polypyrimidine tract-binding protein 3 isoform 3 [Pan
paniscus]
gi|51476645|emb|CAH18301.1| hypothetical protein [Homo sapiens]
Length = 555
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 174 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 233
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 234 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
>gi|395740824|ref|XP_002820149.2| PREDICTED: polypyrimidine tract-binding protein 3 isoform 2 [Pongo
abelii]
Length = 555
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 174 EGAVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 233
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 234 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 290
>gi|328788959|ref|XP_625087.3| PREDICTED: polypyrimidine tract-binding protein 2 [Apis mellifera]
Length = 449
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +
Sbjct: 33 NTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLS 92
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 93 LEGQNIYNSC-CTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 133
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 55
CTLRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 103 CTLRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 151
>gi|187608032|ref|NP_001120518.1| polypyrimidine tract binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|170287806|gb|AAI61422.1| LOC100145652 protein [Xenopus (Silurana) tropicalis]
Length = 519
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 49 GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
G +G L +S VL +EN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 138 GGEGLVLSGQSPVLRIIVENLFYPVTLEVLHQIFSKFGTVIKIITFTKNNQFQALLQYAD 197
Query: 109 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 198 PMNAHHAKVALDGQNIYNAC-CTLRIEFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 256
>gi|328712478|ref|XP_001947870.2| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 1
[Acyrthosiphon pisum]
Length = 613
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E+M + ++LDVL+ +FS +G V KI F KN Q LIQYPDV TA AK +
Sbjct: 193 NTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLS 252
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY CKL I YS+ + L++K NND+SRDYT P+ P
Sbjct: 253 LDGQNIYTSC-CKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 293
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
C LRI YS + L+VK+ + +SRDYTNP LP
Sbjct: 263 CKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 293
>gi|380018871|ref|XP_003693343.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Apis
florea]
Length = 578
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +
Sbjct: 188 NTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLS 247
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 248 LEGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 288
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 55
CTLRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 258 CTLRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 306
>gi|350418407|ref|XP_003491847.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Bombus
impatiens]
Length = 578
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E M Y ++LDVL+ +F+ FG V KI F KN QALIQY D+ +A AK +
Sbjct: 188 NTVLRVIVEQMVYPISLDVLYQIFTRFGKVLKIVTFTKNNTFQALIQYADMLSAQTAKLS 247
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
LEG IY+ C L I YS+ +L++K NND+SRDYT PS P
Sbjct: 248 LEGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNPSLP 288
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 55
CTLRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 258 CTLRIDYSKMQNLNVKYNNDKSRDYTNPSLPTGDANLDAA---SLALGGELL 306
>gi|328712476|ref|XP_003244820.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 2
[Acyrthosiphon pisum]
Length = 581
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E+M + ++LDVL+ +FS +G V KI F KN Q LIQYPDV TA AK +
Sbjct: 161 NTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLS 220
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY CKL I YS+ + L++K NND+SRDYT P+ P
Sbjct: 221 LDGQNIYTSC-CKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 261
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
C LRI YS + L+VK+ + +SRDYTNP LP
Sbjct: 231 CKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 261
>gi|413933762|gb|AFW68313.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 251
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 74 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 133
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 134 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 192
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 193 RSRDFTNPSLP 203
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV 35
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 171 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPT 204
>gi|328712480|ref|XP_003244821.1| PREDICTED: polypyrimidine tract-binding protein 1-like isoform 3
[Acyrthosiphon pisum]
Length = 632
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E+M + ++LDVL+ +FS +G V KI F KN Q LIQYPDV TA AK +
Sbjct: 193 NTVLRVIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLS 252
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY CKL I YS+ + L++K NND+SRDYT P+ P
Sbjct: 253 LDGQNIYTSC-CKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 293
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
C LRI YS + L+VK+ + +SRDYTNP LP
Sbjct: 263 CKLRIEYSKLSSLNVKYNNDKSRDYTNPTLP 293
>gi|344271491|ref|XP_003407571.1| PREDICTED: regulator of differentiation 1 [Loxodonta africana]
Length = 581
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 200 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 259
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A A+ AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 260 NAHYARMALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 316
>gi|413933763|gb|AFW68314.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
Length = 445
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 131
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 150 RSRDYTLPSTPMVNSQPSILGQQPVP 175
RSRD+T PS P +P QQ P
Sbjct: 191 RSRDFTNPSLP-TEQRPRASQQQAYP 215
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 42/176 (23%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV-------------------------- 35
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 169 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQQAYPDPANLYAFQQAGA 228
Query: 36 --------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGP 87
A A G L G+ G ++++++ N + + D L +FS +G
Sbjct: 229 SYAQMGRAAMIAAAFGGTLPHGVTGTN--ERCTLIVSNLNNDK--IDEDKLFNLFSLYGN 284
Query: 88 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+ +I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 285 IVRIKVL-RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 336
>gi|281210224|gb|EFA84392.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 468
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
+E +N+LL +I N+ Y VT+DVL+ +FS +G V KI +F K+G Q+LIQ +A+
Sbjct: 132 VETPNNILLVTISNIIYPVTIDVLYQLFSKYGSVLKILIFSKSGNFQSLIQLHTTDSAIN 191
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT----LPSTPMVNSQPSILG 170
AK L+G IY+G C L I YS +L IK NND+SRD+T LP T + S P G
Sbjct: 192 AKRELDGQNIYNGC-CTLKIQYSSLNNLRIKYNNDKSRDFTNPTLLPGTTSLLSNPIGFG 250
Query: 171 QQPVP 175
P P
Sbjct: 251 ISPAP 255
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 33
G CTL+I YS+ +L +K+ + +SRD+TNP L
Sbjct: 204 GCCTLKIQYSSLNNLRIKYNNDKSRDFTNPTL 235
>gi|195055925|ref|XP_001994863.1| GH17472 [Drosophila grimshawi]
gi|193892626|gb|EDV91492.1| GH17472 [Drosophila grimshawi]
Length = 920
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E + Y V+LD+LH +F FG V KI F KN QALIQYPD +A AK
Sbjct: 538 NTVLRVIVETLMYPVSLDILHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSI 597
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 598 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 638
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 606 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 645
>gi|413949172|gb|AFW81821.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 339
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T+++LH VF A+G V+
Sbjct: 157 NVYMQFSSHQELTTDQSSHGRNSDQGSEPNRILLVTIHHMIYPITVEILHQVFKAYGFVE 216
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQY Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 217 KIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 275
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 276 RSRDFTNPSLP 286
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV 35
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 254 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPT 287
>gi|195391604|ref|XP_002054450.1| GJ22800 [Drosophila virilis]
gi|194152536|gb|EDW67970.1| GJ22800 [Drosophila virilis]
Length = 818
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E + Y V+LD+LH +F FG V KI F KN QALIQYPD +A AK L+
Sbjct: 434 VLRVIVETLMYPVSLDILHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILD 493
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 494 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 532
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLRI S T L+VK+ + +SRD+TNP LP
Sbjct: 500 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 532
>gi|195110769|ref|XP_001999952.1| GI22798 [Drosophila mojavensis]
gi|193916546|gb|EDW15413.1| GI22798 [Drosophila mojavensis]
Length = 834
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E + Y V+LD+LH +F FG V KI F KN QALIQYPD +A AK L+
Sbjct: 450 VLRVIVETLMYPVSLDILHQIFQRFGKVLKIVTFTKNNSFQALIQYPDAHSAQQAKSILD 509
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 510 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 548
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLRI S T L+VK+ + +SRD+TNP LP
Sbjct: 516 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 548
>gi|348556107|ref|XP_003463864.1| PREDICTED: regulator of differentiation 1-like [Cavia porcellus]
Length = 688
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 314 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKM 373
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 374 ALDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSL 423
>gi|348540154|ref|XP_003457553.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 511
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D +A AK AL+
Sbjct: 167 VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVSAQQAKLALD 226
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
G IY+ C L I +S+ +L++K NND+SRDYT P P + QPS
Sbjct: 227 GQNIYNSC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSF 273
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 36/170 (21%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA---PS---------AIDASGQL----- 46
CTLRI +S +L+VK+ + +SRDYT P LP PS + D+S L
Sbjct: 235 CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSFDPTVAVAFSKDSSSLLGALNP 294
Query: 47 ------------SVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 94
V L G+ S VLL S N + VT L +F +G VQ++ +
Sbjct: 295 LSAAAAAAAAAGRVALTGQ--TGSSGVLLVSNLN-EEMVTPQSLFTLFGVYGDVQRVKIL 351
Query: 95 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
N ALIQ + A +A L G +Y G + ++ S+H +++
Sbjct: 352 -YNKKDSALIQMSESNQAQLAMSHLNGQKMY-GKIIR--VTLSKHQTVAL 397
>gi|431918462|gb|ELK17686.1| Regulator of differentiation 1 [Pteropus alecto]
Length = 523
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 142 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 201
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + PS+
Sbjct: 202 NAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGHPSL 258
>gi|125827109|ref|XP_001335967.1| PREDICTED: regulator of differentiation 1 [Danio rerio]
Length = 522
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
DG + +S VL +EN+ Y V+L+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 142 DGGMMPGQSPVLRIIVENLYYPVSLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPM 201
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+G C L + +S+ T L++K NND+SRD+T P + QP++
Sbjct: 202 NAHHAKVALDGQNIYNGC-CTLRVEFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPTL 258
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLR+ +S T L+VK+ + +SRD+T LP
Sbjct: 218 GCCTLRVEFSKLTSLNVKYNNDKSRDFTRLDLP 250
>gi|57004|emb|CAA43203.1| pyrimidine binding protein 2 [Rattus norvegicus]
Length = 367
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 68 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 127
N+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +A AK +L+G IY+
Sbjct: 1 NLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNA 60
Query: 128 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
C L I +S+ T L++K NND+SRDYT P P +SQPS+
Sbjct: 61 C-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSL 100
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 62 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 96
>gi|392341647|ref|XP_003754390.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
gi|392349693|ref|XP_003750446.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Rattus norvegicus]
Length = 558
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 90/156 (57%), Gaps = 9/156 (5%)
Query: 42 ASGQLSVGLDGKK-LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL 100
AS + +D K + +S+VL +EN+ Y VTLDVLH +FS FG + K+ MF KN
Sbjct: 162 ASAASTAAVDAKMVMAGQSSVLRIIVENLFYPVTLDVLHQIFSKFGTILKLIMFTKNNQF 221
Query: 101 QALIQYPDVQTAVVAKEALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPST 159
QAL+Q + AK +L+G IY C LHI +S+ T L++K NND+SRDY P
Sbjct: 222 QALLQDAGPVSTQHAKLSLDGQNIYSA--CXTLHIDFSKLTSLNVKYNNDKSRDYRQPGL 279
Query: 160 PMVNSQPSILGQQPVPMVGA----TANQYNGAQFAP 191
P +SQPS+ Q + G + +QY GA+F P
Sbjct: 280 PSGDSQPSV-DQTMAAVFGTLSIMSVSQYAGARFPP 314
>gi|417411514|gb|JAA52191.1| Putative polypyrimidine tract-binding protein, partial [Desmodus
rotundus]
Length = 541
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 160 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 219
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + PS+
Sbjct: 220 NAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGHPSL 276
>gi|308509766|ref|XP_003117066.1| CRE-PTB-1 protein [Caenorhabditis remanei]
gi|308241980|gb|EFO85932.1| CRE-PTB-1 protein [Caenorhabditis remanei]
Length = 436
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 4/127 (3%)
Query: 36 APSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM 93
AP+ D A+G +S G + +P S VL IENM + V+L+VLH +F+ FG V +I
Sbjct: 25 APANTDSVANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSLEVLHQLFARFGKVLRIIT 83
Query: 94 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRD 153
F KN QAL+Q + +A +AK+ LE +Y+G C L I YS+ + L++K NND+SRD
Sbjct: 84 FSKNNTFQALVQMSEANSAQLAKQGLENQNVYNGC-CTLRIDYSKLSTLNVKYNNDKSRD 142
Query: 154 YTLPSTP 160
YT P+ P
Sbjct: 143 YTNPNLP 149
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 48
G CTLRI YS + L+VK+ + +SRDYTNP LP I+ + +S
Sbjct: 117 GCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTIEQTLAMST 163
>gi|432091564|gb|ELK24589.1| Regulator of differentiation 1 [Myotis davidii]
Length = 524
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 143 EGTMLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPL 202
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + PS+
Sbjct: 203 NAQYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGHPSL 259
>gi|293335109|ref|NP_001169809.1| uncharacterized protein LOC100383701 [Zea mays]
gi|224031787|gb|ACN34969.1| unknown [Zea mays]
Length = 397
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 25 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 84
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 85 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 143
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 144 RSRDFTNPSLP 154
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 41/175 (23%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV-------------------------- 35
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 122 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQAYPDPANLYAFQQAGAS 181
Query: 36 -------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
A A G L G+ G ++++++ N + + D L +FS +G +
Sbjct: 182 YAQMGRAAMIAAAFGGTLPHGVTGTN--ERCTLIVSNLNNDK--IDEDKLFNLFSLYGNI 237
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 238 VRIKVL-RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 288
>gi|300681487|emb|CBH32581.1| RNA recognition domain containing protein [Triticum aestivum]
Length = 277
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 94/170 (55%), Gaps = 16/170 (9%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N YL + + Q S G + + EP + +LL ++ +M Y +T++VLH VFS +G V+
Sbjct: 72 NVYLQYSSHQELTTDQSSHGRNPDQDEP-NRILLVTVHHMLYPMTVEVLHQVFSPYGFVE 130
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K G QALIQ+ Q+A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 131 KIVTFQKTAGFQALIQFQSRQSAIQAAGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 189
Query: 150 RSRDYTLPSTPMVN---------SQPSILG-QQPVPMVGATANQYNGAQF 189
RSRD+T PS P + PS+ G QQP G A Q++ F
Sbjct: 190 RSRDFTNPSLPTEQRPRSSQLGYNDPSLFGFQQP----GGKALQFSFTFF 235
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 168 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLP 200
>gi|413933764|gb|AFW68315.1| hypothetical protein ZEAMMB73_143783 [Zea mays]
gi|413945515|gb|AFW78164.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 131
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 41/175 (23%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV-------------------------- 35
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 169 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQAYPDPANLYAFQQAGAS 228
Query: 36 -------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
A A G L G+ G ++++++ N + + D L +FS +G +
Sbjct: 229 YAQMGRAAMIAAAFGGTLPHGVTGTN--ERCTLIVSNLNNDK--IDEDKLFNLFSLYGNI 284
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 285 VRIKVL-RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 335
>gi|444730196|gb|ELW70586.1| Regulator of differentiation 1 [Tupaia chinensis]
Length = 386
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 139 EGPVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 198
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 199 NAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSL 255
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP--------------------------VAP 37
CTLRI +S T L+VK+ + +SRD+T LP + P
Sbjct: 217 CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLESPMAAAFGLSVPTVPGALGP 276
Query: 38 SAIDASGQL-SVGLDGKKLEPESNVLLASIENMQ-------YAVTLDVLHMVFSAFGPVQ 89
AI +S + + G P ++VLL + N + + +D L +F G
Sbjct: 277 LAITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFVDDLKNLFIEAGCSV 336
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 140
K F + ALIQ V+ A+ A L H + G L +S+S+ T
Sbjct: 337 KAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDL--GENHHLRVSFSKST 385
>gi|293335567|ref|NP_001169470.1| uncharacterized protein LOC100383343 [Zea mays]
gi|224029557|gb|ACN33854.1| unknown [Zea mays]
Length = 444
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T+++LH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQSSHGRNSDQGSEPNRILLVTIHHMIYPITVEILHQVFKAYGFVE 131
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQY Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 41/175 (23%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP--------------------------- 34
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 169 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQGYLDPANLYAFQQAGAS 228
Query: 35 ------VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
VA A G L G+ G E L+ S N + D L +FS +G +
Sbjct: 229 YAQMGRVAMIAAAFGGTLPHGVTGTN---ERCTLIVSNLNTD-KIDEDKLFNLFSLYGNI 284
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 285 VRIKIL-RNKPDHALVEMADGLQAELAVHYLKGSILFGK---KLEVNYSKYPNIT 335
>gi|195575404|ref|XP_002105669.1| GD16206 [Drosophila simulans]
gi|194201596|gb|EDX15172.1| GD16206 [Drosophila simulans]
Length = 792
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 9/123 (7%)
Query: 38 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
SA++A G + G + VL +E++ Y V+LDVLH +F +G V KI F KN
Sbjct: 393 SAVNAGGNAAGG--------PNTVLRVIVESLMYPVSLDVLHQIFQRYGKVLKIVTFTKN 444
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 445 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 503
Query: 158 STP 160
+ P
Sbjct: 504 ALP 506
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 474 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 513
>gi|359480737|ref|XP_003632518.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Vitis vinifera]
Length = 412
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 45 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 104
Q S G G + + +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALI
Sbjct: 52 QNSQGRKGDQDAQPNRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALI 111
Query: 105 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
QY Q+AV A AL+G IYDG C+L I +S T+L + NN+RSRD+T PS P
Sbjct: 112 QYQSRQSAVSAINALQGRNIYDGC-CQLDIQFSNLTELQVNYNNERSRDFTNPSLP 166
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C L I +S T+L V + + RSRD+TNP LP
Sbjct: 134 GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 166
>gi|296082547|emb|CBI21552.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 45 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 104
Q S G G + + +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALI
Sbjct: 88 QNSQGRKGDQDAQPNRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALI 147
Query: 105 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
QY Q+AV A AL+G IYDG C+L I +S T+L + NN+RSRD+T PS P
Sbjct: 148 QYQSRQSAVSAINALQGRNIYDGC-CQLDIQFSNLTELQVNYNNERSRDFTNPSLP 202
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C L I +S T+L V + + RSRD+TNP LP
Sbjct: 170 GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 202
>gi|242090663|ref|XP_002441164.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
gi|241946449|gb|EES19594.1| hypothetical protein SORBIDRAFT_09g021560 [Sorghum bicolor]
Length = 444
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 131
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 41/175 (23%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV-------------------------- 35
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 169 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRAPQQGYPDPANLYAFQQAGAS 228
Query: 36 -------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
A A G L G+ G E L+ S N + D L +FS +G +
Sbjct: 229 FAQMGRAAMIAAAFGGSLPHGVTGAN---ERCTLIVSNLNTD-KIDEDKLFNLFSLYGNI 284
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 285 VRIKIL-RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 335
>gi|193786069|dbj|BAG50959.1| unnamed protein product [Homo sapiens]
Length = 457
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
+G L +S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D
Sbjct: 76 EGTVLPGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 135
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK AL+G IY+ C L I +S+ L++K NND+SRD+T P + QPS+
Sbjct: 136 NAHYAKMALDGQNIYNAC-CTLRIDFSKLISLNVKYNNDKSRDFTRLDLPTGDGQPSL 192
>gi|67678144|gb|AAH97557.1| VgRBP60 protein [Xenopus laevis]
Length = 472
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVL +FS FG V KI F KN QAL+QY D +
Sbjct: 177 GIAMSGQSPVLRIIVENLFYPVTLDVLQQIFSKFGTVLKIITFTKNNQFQALLQYGDPVS 236
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P + QPS+
Sbjct: 237 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDGQPSL 292
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S T L+VK+ + +SRDYT P LP
Sbjct: 254 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 284
>gi|413949171|gb|AFW81820.1| hypothetical protein ZEAMMB73_476847 [Zea mays]
Length = 529
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T+++LH VF A+G V+
Sbjct: 157 NVYMQFSSHQELTTDQSSHGRNSDQGSEPNRILLVTIHHMIYPITVEILHQVFKAYGFVE 216
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQY Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 217 KIVTFQKSAGFQALIQYHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 275
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 276 RSRDFTNPSLP 286
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 41/175 (23%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP--------------------------- 34
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 254 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQGYLDPANLYAFQQAGAS 313
Query: 35 ------VAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
VA A G L G+ G E L+ S N + D L +FS +G +
Sbjct: 314 YAQMGRVAMIAAAFGGTLPHGVTGTN---ERCTLIVSNLNTD-KIDEDKLFNLFSLYGNI 369
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 370 VRIKIL-RNKPDHALVEMADGLQAELAVHYLKGSILFGK---KLEVNYSKYPNIT 420
>gi|413945516|gb|AFW78165.1| hypothetical protein ZEAMMB73_011466 [Zea mays]
Length = 444
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 72 NVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMIYPITVEVLHQVFKAYGFVE 131
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K+ G QALIQ+ Q AV A +L G IYDG C+L I YS ++L + NND
Sbjct: 132 KIVTFQKSAGFQALIQFHSRQEAVEAFGSLHGRNIYDGC-CQLDIQYSNLSELQVHYNND 190
Query: 150 RSRDYTLPSTP 160
RSRD+T PS P
Sbjct: 191 RSRDFTNPSLP 201
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 41/175 (23%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV-------------------------- 35
G C L I YS ++L V + + RSRD+TNP LP
Sbjct: 169 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRASQQAYPDPANLYAFQQAGGS 228
Query: 36 -------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
A A G L G+ G ++++++ N + + D L +FS +G +
Sbjct: 229 IYQMGRAAMIAAAFGGTLPHGVTGTN--ERCTLIVSNLNNDK--IDEDKLFNLFSLYGNI 284
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+I + +N AL++ D A +A L+G ++ KL ++YS++ +++
Sbjct: 285 VRIKVL-RNKPDHALVEMADGLQAELAVHYLKGAILFGK---KLEVNYSKYPNIT 335
>gi|195354540|ref|XP_002043755.1| GM16408 [Drosophila sechellia]
gi|194128955|gb|EDW50998.1| GM16408 [Drosophila sechellia]
Length = 792
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 9/123 (7%)
Query: 38 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
SA++A G + G + VL +E++ Y V+LDVLH +F +G V KI F KN
Sbjct: 393 SAVNAGGNAAGG--------PNTVLRVIVESLMYPVSLDVLHQIFQRYGKVLKIVTFTKN 444
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
QALIQYPD +A AK L+G IY+ G C L I S+ T L++K NND+SRD+T P
Sbjct: 445 NSFQALIQYPDANSAQHAKSLLDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNP 503
Query: 158 STP 160
+ P
Sbjct: 504 ALP 506
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 474 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 513
>gi|359480735|ref|XP_002277938.2| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Vitis vinifera]
Length = 448
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 45 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 104
Q S G G + + +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALI
Sbjct: 88 QNSQGRKGDQDAQPNRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALI 147
Query: 105 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
QY Q+AV A AL+G IYDG C+L I +S T+L + NN+RSRD+T PS P
Sbjct: 148 QYQSRQSAVSAINALQGRNIYDGC-CQLDIQFSNLTELQVNYNNERSRDFTNPSLP 202
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C L I +S T+L V + + RSRD+TNP LP
Sbjct: 170 GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 202
>gi|213513392|ref|NP_001133760.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
gi|209155238|gb|ACI33851.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 50 LDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
+ + + +S VL +EN+ Y VTL+VLH +FS +G V KI F KN QAL+QY D
Sbjct: 189 MGARGMATQSPVLRVIVENLFYPVTLEVLHQIFSKYGSVLKIITFTKNNQFQALVQYADP 248
Query: 110 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
TA K +L+G IY+ G C L +S+S+ T L++K NND+SRDYT P
Sbjct: 249 MTAQHTKMSLDGQNIYN-GCCTLRVSFSKLTSLNVKFNNDKSRDYTRP 295
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 33
G CTLR+++S T L+VKF + +SRDYT P L
Sbjct: 266 GCCTLRVSFSKLTSLNVKFNNDKSRDYTRPDL 297
>gi|432964272|ref|XP_004086906.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 541
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 67
+ +S H +L S R++ V P + L+ S VL I+
Sbjct: 148 VQFSNHKELKTDAASQRTQAVLQAVSAVQPPGSEVQDVLAAA--------SSPVLRIIID 199
Query: 68 NMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 127
NM Y VTLDVL +FS FG V KI F KN QAL+QY D A AK AL+G IY+
Sbjct: 200 NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQYSDPVQAQHAKLALDGQNIYNS 259
Query: 128 GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
C L I +S+ +L++K NND+SRDY+ P P +S+P++
Sbjct: 260 C-CTLRIDFSKLVNLNVKYNNDKSRDYSRPELPAGDSRPTL 299
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 36/172 (20%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLDGK-------- 53
CTLRI +S +L+VK+ + +SRDY+ P LP S +D S ++ D
Sbjct: 261 CTLRIDFSKLVNLNVKYNNDKSRDYSRPELPAGDSRPTLDPSVAAALSKDSTPLLCKIPG 320
Query: 54 KLEPES---------------------NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 92
L P S VLLAS N + VT L +F +G VQ++
Sbjct: 321 ALNPLSAAAAAAAAAGRVALPGQAGSGGVLLASNLN-EEMVTPQSLFTLFGVYGDVQRVK 379
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
+ N ALIQ D A +A L G +Y G + ++ S+H +++
Sbjct: 380 IL-YNKKDSALIQMCDPSQAQLAMSHLNGQKMY-GKIIR--VTLSKHQSVAL 427
>gi|223647470|gb|ACN10493.1| Polypyrimidine tract-binding protein 1 [Salmo salar]
Length = 574
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 50 LDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
+ + + +S VL +EN+ Y VTL+VLH +FS +G V KI F KN QAL+QY D
Sbjct: 189 MGARGMATQSPVLRVIVENLFYPVTLEVLHQIFSKYGSVLKIITFTKNNQFQALVQYADP 248
Query: 110 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
TA K +L+G IY+ G C L +S+S+ T L++K NND+SRDYT P
Sbjct: 249 MTAQHTKMSLDGQNIYN-GCCTLRVSFSKLTSLNVKFNNDKSRDYTRP 295
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYL 33
G CTLR+++S T L+VKF + +SRDYT P L
Sbjct: 266 GCCTLRVSFSKLTSLNVKFNNDKSRDYTRPDL 297
>gi|300681488|emb|CBH32582.1| RNA recognition domain containing protein,expressed [Triticum
aestivum]
Length = 439
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 90/162 (55%), Gaps = 12/162 (7%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N YL + + Q S G + + EP + +LL ++ +M Y +T++VLH VFS +G V+
Sbjct: 72 NVYLQYSSHQELTTDQSSHGRNPDQDEP-NRILLVTVHHMLYPMTVEVLHQVFSPYGFVE 130
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
KI F K G QALIQ+ Q+A+ A AL G IYDG C+L I YS ++L + NND
Sbjct: 131 KIVTFQKTAGFQALIQFQSRQSAIQAAGALHGRNIYDGC-CQLDIQYSNLSELQVHYNND 189
Query: 150 RSRDYTLPSTPMVN---------SQPSILG-QQPVPMVGATA 181
RSRD+T PS P + PS+ G QQP G A
Sbjct: 190 RSRDFTNPSLPTEQRPRSSQLGYNDPSLFGFQQPGAAYGQAA 231
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 37/167 (22%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA------------PSAID------AS 43
G C L I YS ++L V + + RSRD+TNP LP PS A
Sbjct: 168 GCCQLDIQYSNLSELQVHYNNDRSRDFTNPSLPTEQRPRSSQLGYNDPSLFGFQQPGAAY 227
Query: 44 GQLSV-----------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 92
GQ +V G+ G + L+ S N + D L +FS +G + +I
Sbjct: 228 GQAAVIAAAFGGTLPPGVTGTN---DRCTLIVSNLNSD-KIDADKLFNLFSIYGNIVRIK 283
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
+ +N AL+Q D A +A L+G + KL +++S++
Sbjct: 284 VL-RNKPDHALVQMADGLQAELAIHYLKGAMLLGQ---KLEVNFSKY 326
>gi|351710810|gb|EHB13729.1| Regulator of differentiation 1, partial [Heterocephalus glaber]
Length = 539
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL IEN+ Y VTL+VLH +FS FG V KI F KN QAL+QY D A AK
Sbjct: 165 QSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKM 224
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 225 ALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSL 274
>gi|147856398|emb|CAN82466.1| hypothetical protein VITISV_002663 [Vitis vinifera]
Length = 476
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 45 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 104
Q S G G + + +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALI
Sbjct: 88 QNSQGRKGDQDAQPNRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALI 147
Query: 105 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
QY Q+AV A AL+G IYDG C+L I +S T+L + NN+RSRD+T PS P
Sbjct: 148 QYQSRQSAVSAINALQGRNIYDGC-CQLDIQFSNLTELQVNYNNERSRDFTNPSLP 202
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C L I +S T+L V + + RSRD+TNP LP
Sbjct: 170 GCCQLDIQFSNLTELQVNYNNERSRDFTNPSLP 202
>gi|356499519|ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 439
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 56 EPESN-VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E E N +LL ++ +M Y +T DVLH VFS G V+KI F K+ G QALIQY Q+AV
Sbjct: 93 EDEPNRILLVTVHHMLYPITADVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVT 152
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
A+ L+G IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 153 ARSTLQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|296081200|emb|CBI18226.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+
Sbjct: 92 GRGDEP-NRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQS 150
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ +L+G IYDG C+L I +S +L + NN+RSRD+T PS P
Sbjct: 151 AVAARNSLQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP 198
>gi|224082480|ref|XP_002306709.1| predicted protein [Populus trichocarpa]
gi|222856158|gb|EEE93705.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I +MQY +T+DVLH VFS G V+K+ F K+ G QALIQY Q+
Sbjct: 92 GRGEEP-NRILLITIHHMQYPITVDVLHQVFSPHGFVEKMVTFQKSAGFQALIQYQSRQS 150
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ +L+G IYDG C+L I +S +L + NND SRD+T P+ P
Sbjct: 151 AVQARTSLQGRNIYDGC-CQLDIQFSNLDELQVNYNNDSSRDFTNPNLP 198
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS------------------ 43
G C L I +S +L V + + SRD+TNP LP A +
Sbjct: 166 GCCQLDIQFSNLDELQVNYNNDSSRDFTNPNLPSEQKARSSQVCTRLLLYFHMPNAAAIA 225
Query: 44 ----GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGG 99
G L G+ G +L++++ + + D L +FS +G + +I + +N
Sbjct: 226 AAFGGGLPPGISGTN--DRCTILVSNLNPDR--IDEDKLFNLFSLYGNIVRIKLL-RNKP 280
Query: 100 LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
AL+Q D A +A L+G ++ ++ +++S+H +++
Sbjct: 281 DHALVQMGDGFQAELAVHFLKGAMLFGK---RMEVNFSKHPNIT 321
>gi|148701925|gb|EDL33872.1| mCG9934 [Mus musculus]
Length = 559
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+ VL ++N Y VTL+VLH +FS FG V KI + KN QAL+QY +A AK
Sbjct: 152 QGTVLRILVDNFFYRVTLEVLHQLFSRFGTVLKIITYTKNNRFQALLQYAHSMSAKCAKL 211
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 167
L+G IYD C L IS+S T+L +K NND SRDYT P P SQPS
Sbjct: 212 CLDGQNIYDAC-CTLRISFSGLTNLIVKYNNDESRDYTRPDLPSDESQPS 260
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI++S T+L VK+ + SRDYT P LP
Sbjct: 223 CTLRISFSGLTNLIVKYNNDESRDYTRPDLP 253
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 73 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132
VT L ++F A+G VQ++ + N AL+Q D A +A + L GH +Y C L
Sbjct: 377 VTPQSLFILFGAYGDVQRVKILF-NRKENALVQMADGSQAELALKHLNGHKLYGKALCIL 435
Query: 133 HISYSRHTDLSI----KVNNDRSRDYT 155
S+H + + K + D +++Y
Sbjct: 436 P---SKHQSVKLPREGKEDQDLTKEYV 459
>gi|33414511|ref|NP_877970.1| polypyrimidine tract-binding protein [Rattus norvegicus]
gi|29824910|gb|AAO92353.1| SMPTB [Rattus norvegicus]
gi|149028489|gb|EDL83874.1| polypyrimidine tract-binding protein [Rattus norvegicus]
Length = 588
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN Y VTL+VLH +FS FG V KI KN QAL+QY V +A AK
Sbjct: 186 QSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKL 245
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 167
L+G IYD C L IS+S T+L +K NND+SRDY P P +SQPS
Sbjct: 246 FLDGQNIYDAC-CTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPS 294
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI++S T+L VK+ + +SRDY P LP
Sbjct: 257 CTLRISFSGLTNLMVKYNNDKSRDYMRPDLP 287
>gi|386766857|ref|NP_001247399.1| hephaestus, isoform Y [Drosophila melanogaster]
gi|383293058|gb|AFH06716.1| hephaestus, isoform Y [Drosophila melanogaster]
Length = 898
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK
Sbjct: 516 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 575
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 576 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 616
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 584 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 623
>gi|341888906|gb|EGT44841.1| CBN-PTB-1 protein [Caenorhabditis brenneri]
Length = 509
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
Query: 42 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 101
A+G +S G + +P S VL IENM + V+LDVLH +F+ +G V +I F KN Q
Sbjct: 107 ANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSLDVLHQLFARYGKVLRIITFSKNNTFQ 165
Query: 102 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AL+Q + +A +AK LE +Y+G C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 166 ALVQMSEANSAQLAKAGLENQNVYNGC-CTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 223
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLS 47
G CTLRI YS + L+VK+ + +SRDYTNP LP I+ S LS
Sbjct: 191 GCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTIEQSLALS 236
>gi|28571965|ref|NP_788780.1| hephaestus, isoform H [Drosophila melanogaster]
gi|281362946|ref|NP_001163787.1| hephaestus, isoform O [Drosophila melanogaster]
gi|281362952|ref|NP_001163790.1| hephaestus, isoform R [Drosophila melanogaster]
gi|16303586|gb|AAL14775.1| hephaestus [Drosophila melanogaster]
gi|28381533|gb|AAO41627.1| hephaestus, isoform H [Drosophila melanogaster]
gi|157816746|gb|ABV82366.1| LD04329p [Drosophila melanogaster]
gi|272477264|gb|ACZ95080.1| hephaestus, isoform O [Drosophila melanogaster]
gi|272477267|gb|ACZ95083.1| hephaestus, isoform R [Drosophila melanogaster]
Length = 789
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK
Sbjct: 403 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 462
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 463 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 503
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 471 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 510
>gi|359493143|ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
[Vitis vinifera]
Length = 432
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+
Sbjct: 92 GRGDEP-NRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQS 150
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ +L+G IYDG C+L I +S +L + NN+RSRD+T PS P
Sbjct: 151 AVAARNSLQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP 198
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 32/166 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA----------------------PSA 39
G C L I +S +L V + + RSRD+TNP LP SA
Sbjct: 166 GCCQLDIQFSNLDELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGVGFPQMPNASA 225
Query: 40 IDAS--GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
I A+ G L G+ G VL++++ + + D L +FS +G + +I + +N
Sbjct: 226 IAAAFGGGLPPGISGTN--DRCTVLVSNLNPDR--IDEDKLFNLFSIYGNIVRIKLL-RN 280
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
AL+Q D A +A L+G ++ +L +++S++++++
Sbjct: 281 KPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKYSNIT 323
>gi|363814551|ref|NP_001242751.1| uncharacterized protein LOC100819672 [Glycine max]
gi|255639782|gb|ACU20184.1| unknown [Glycine max]
Length = 431
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL ++ +M Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+
Sbjct: 91 GRGDEP-NRILLVTVHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQS 149
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ L+G IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 150 AVAARSTLQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|334702287|gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum tuberosum]
Length = 441
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I +M Y +T+DVLH VFS G V+KI F K+ G QALIQY Q+
Sbjct: 92 GRGDEP-NRILLVTIHHMLYPITVDVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQVQQS 150
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
+V A+ +L+G IYDG C+L I +S +L + NN+RSRDYT P+ P
Sbjct: 151 SVSARNSLQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDYTNPNLP 198
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G C L I +S +L V + + RSRDYTNP LP
Sbjct: 166 GCCQLDIQFSNLDELQVNYNNERSRDYTNPNLP 198
>gi|195505570|ref|XP_002099562.1| GE23291 [Drosophila yakuba]
gi|194185663|gb|EDW99274.1| GE23291 [Drosophila yakuba]
Length = 802
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK
Sbjct: 420 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 479
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 480 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 520
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 488 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 527
>gi|386766855|ref|NP_001247398.1| hephaestus, isoform W [Drosophila melanogaster]
gi|383293057|gb|AFH06715.1| hephaestus, isoform W [Drosophila melanogaster]
Length = 799
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK
Sbjct: 417 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 476
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 477 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 517
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 485 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 524
>gi|356535770|ref|XP_003536416.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Glycine max]
Length = 443
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL ++ +M Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+
Sbjct: 91 GRGDEP-NRILLVTVHHMLYPMTVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSRQS 149
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ L+G IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 150 AVAARSTLQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|194904631|ref|XP_001981034.1| GG11844 [Drosophila erecta]
gi|190655672|gb|EDV52904.1| GG11844 [Drosophila erecta]
Length = 800
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK
Sbjct: 414 NTVLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSL 473
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 474 LDGQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 514
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 482 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 521
>gi|449441199|ref|XP_004138370.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 2 [Cucumis sativus]
Length = 408
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I +M Y +T++VLH VF G V+KI F K+ G QALIQY Q
Sbjct: 56 GRGDEP-NRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQC 114
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
AV A+ AL+G IYDG C+L I +S +L + NN+RSRD+T PS P S+P G+
Sbjct: 115 AVSARTALQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP---SEPK--GR 168
Query: 172 QPVPMVGATANQY 184
P G T Y
Sbjct: 169 SSQPGYGDTGGMY 181
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 40/176 (22%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSA---------------IDASGQL 46
G C L I +S +L V + + RSRD+TNP LP P + SG
Sbjct: 130 GCCQLDIQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRSSQPGYGDTGGMYPLQPSGAR 189
Query: 47 SVGLD------------GKKLEP-------ESNVLLASIENMQYAVTLDVLHMVFSAFGP 87
VG G L P VL++++ + + D L +FS +G
Sbjct: 190 PVGFSQMANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDR--IDEDKLFNLFSIYGN 247
Query: 88 VQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+ +I + +N AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 248 IVRIKLL-RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 299
>gi|198452628|ref|XP_001358876.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132005|gb|EAL28019.2| GA15927, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 401 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 460
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 461 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 499
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTLRI S T L+VK+ + +SRD+TNP LP
Sbjct: 467 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 499
>gi|194740822|ref|XP_001952889.1| GF17502 [Drosophila ananassae]
gi|190625948|gb|EDV41472.1| GF17502 [Drosophila ananassae]
Length = 835
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 413 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 472
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 473 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 511
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 479 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 518
>gi|307103430|gb|EFN51690.1| hypothetical protein CHLNCDRAFT_139935 [Chlorella variabilis]
Length = 353
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
Query: 3 PCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAP---SAIDASGQLSVGLDGKKLEPES 59
P L + ++A DL+++ QS+ +RDYTN +P S I A S G DG S
Sbjct: 225 PPVLDMAFAAQPDLAIRAQSYCTRDYTNAAIPWGEPDLSMIQAMLPSSGGTDGP-----S 279
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
NVL S + M Y VT+D +H +FS +G VQKI +F+++G AL+QY DV TA A+ AL
Sbjct: 280 NVLSVSFDQMTYPVTVDGVHTIFSTYGFVQKIHIFERDGRTVALVQYADVATADSARAAL 339
Query: 120 EGHCIYDGG 128
EGH +YDGG
Sbjct: 340 EGHAMYDGG 348
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Query: 61 VLLASIENMQ----YAVTLDVLHMVFSAFGPVQKIAMFDK-NGGLQALIQYPDVQTAVVA 115
VL ++ N+Q AVTLD+L+ VF A G V+K+ + K GG+ A +Q+PD QTA
Sbjct: 146 VLQVNVINIQPDLAQAVTLDLLNSVFGAHGFVKKLVTYAKPEGGVVAWVQFPDAQTAATV 205
Query: 116 KEALEG-----HCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM 161
+ L+G H + D L ++++ DL+I+ + +RDYT + P
Sbjct: 206 RNTLQGQPIPRHLLNDHPNPPVLDMAFAAQPDLAIRAQSYCTRDYTNAAIPW 257
>gi|357443611|ref|XP_003592083.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481131|gb|AES62334.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 407
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I ++ Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+
Sbjct: 55 GRGDEP-NRILLVTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQS 113
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
++ A+ AL+G IYDG C+L I +S +L + NNDRSRD+T P+ P G+
Sbjct: 114 SITARTALQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQK-----GR 167
Query: 172 QPVPMVGATANQYNGAQFAPPP----PEQPMMHQPTAAGWGAVPPA 213
P G N Y G Q + P P+ P AA G +PP
Sbjct: 168 PPQLGYGDAGNMY-GVQGSGPRTVGYPQMPNAAAIAAAFGGGLPPG 212
>gi|17861972|gb|AAL39463.1| LD03185p [Drosophila melanogaster]
Length = 571
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 224 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 283
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 284 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 322
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 290 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 329
>gi|17864284|ref|NP_524703.1| hephaestus, isoform C [Drosophila melanogaster]
gi|281362954|ref|NP_001163791.1| hephaestus, isoform S [Drosophila melanogaster]
gi|281362956|ref|NP_001163792.1| hephaestus, isoform T [Drosophila melanogaster]
gi|281362958|ref|NP_001163793.1| hephaestus, isoform U [Drosophila melanogaster]
gi|6665714|gb|AAF22979.1|AF211191_1 polypyrimidine tract binding protein [Drosophila melanogaster]
gi|23172814|gb|AAN14296.1| hephaestus, isoform C [Drosophila melanogaster]
gi|272477268|gb|ACZ95084.1| hephaestus, isoform S [Drosophila melanogaster]
gi|272477269|gb|ACZ95085.1| hephaestus, isoform T [Drosophila melanogaster]
gi|272477270|gb|ACZ95086.1| hephaestus, isoform U [Drosophila melanogaster]
Length = 581
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 197 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 256
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 257 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 295
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 263 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 302
>gi|224066621|ref|XP_002302167.1| predicted protein [Populus trichocarpa]
gi|222843893|gb|EEE81440.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I +M Y +T++VLH VFS G V+KI F K+ G QALIQY Q
Sbjct: 92 GRGDEP-NRILLVTIHHMLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQC 150
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ +L+G IYDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 151 AVQARTSLQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 198
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 32/166 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV---APSAIDASGQLSV---------- 48
G C L I +S +L V + + RSRD+TNP LP S+ +G L++
Sbjct: 166 GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLPSEQKGRSSQVCTGLLTIYHPLMPNAAA 225
Query: 49 -----------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
G+ G + +LAS N + D L +FS +G + +I + +N
Sbjct: 226 IAAAFGGGLPPGISGTN---DRCTVLASNLNPD-RIDEDKLFNLFSLYGNIVRIKLL-RN 280
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
AL+Q D A +A L+G ++ ++ +++S+H +++
Sbjct: 281 KPDHALVQMGDGFQAELAVHFLKGAMLFGK---RMEVNFSKHPNIT 323
>gi|359493141|ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
[Vitis vinifera]
Length = 445
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G ++ P + +LL +I ++ Y +T++VLH VFS G V+KI F K+ G QALIQY Q+
Sbjct: 94 GDEVSP-NRILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQS 152
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ +L+G IYDG C+L I +S +L + NN+RSRD+T PS P
Sbjct: 153 AVAARNSLQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP 200
>gi|45552115|ref|NP_788776.2| hephaestus, isoform G [Drosophila melanogaster]
gi|45446737|gb|AAO41623.2| hephaestus, isoform G [Drosophila melanogaster]
Length = 615
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 231 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 290
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 291 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 329
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 297 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 336
>gi|24651780|ref|NP_733460.1| hephaestus, isoform B [Drosophila melanogaster]
gi|28571963|ref|NP_733461.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28571967|ref|NP_788773.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28571969|ref|NP_788774.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28571971|ref|NP_788777.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28571973|ref|NP_788778.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28571975|ref|NP_788779.1| hephaestus, isoform K [Drosophila melanogaster]
gi|28571979|ref|NP_788775.1| hephaestus, isoform F [Drosophila melanogaster]
gi|161079548|ref|NP_001097994.1| hephaestus, isoform N [Drosophila melanogaster]
gi|281362948|ref|NP_001163788.1| hephaestus, isoform P [Drosophila melanogaster]
gi|281362960|ref|NP_001163794.1| hephaestus, isoform V [Drosophila melanogaster]
gi|18042167|gb|AAL57860.1|AF455053_1 hephaestus [Drosophila melanogaster]
gi|23172813|gb|AAF57208.2| hephaestus, isoform B [Drosophila melanogaster]
gi|28381525|gb|AAN14297.2| hephaestus, isoform A [Drosophila melanogaster]
gi|28381526|gb|AAO41620.1| hephaestus, isoform D [Drosophila melanogaster]
gi|28381527|gb|AAO41621.1| hephaestus, isoform E [Drosophila melanogaster]
gi|28381528|gb|AAO41622.1| hephaestus, isoform F [Drosophila melanogaster]
gi|28381530|gb|AAO41624.1| hephaestus, isoform I [Drosophila melanogaster]
gi|28381531|gb|AAO41625.1| hephaestus, isoform J [Drosophila melanogaster]
gi|28381532|gb|AAO41626.1| hephaestus, isoform K [Drosophila melanogaster]
gi|158030462|gb|ABW08818.1| hephaestus, isoform N [Drosophila melanogaster]
gi|189182140|gb|ACD81846.1| LD11808p [Drosophila melanogaster]
gi|272477265|gb|ACZ95081.1| hephaestus, isoform P [Drosophila melanogaster]
gi|272477271|gb|ACZ95087.1| hephaestus, isoform V [Drosophila melanogaster]
Length = 608
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 224 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 283
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 284 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 322
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 290 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 329
>gi|357443609|ref|XP_003592082.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355481130|gb|AES62333.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|388492616|gb|AFK34374.1| unknown [Medicago truncatula]
Length = 443
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I ++ Y +T+DVL+ VFS G V+KI F K+ G QALIQY Q+
Sbjct: 91 GRGDEP-NRILLVTIHHVLYPITVDVLYQVFSPHGSVEKIVTFQKSAGFQALIQYQSQQS 149
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
++ A+ AL+G IYDG C+L I +S +L + NNDRSRD+T P+ P G+
Sbjct: 150 SITARTALQGRNIYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLPTEQK-----GR 203
Query: 172 QPVPMVGATANQYNGAQFAPPP----PEQPMMHQPTAAGWGAVPPA 213
P G N Y G Q + P P+ P AA G +PP
Sbjct: 204 PPQLGYGDAGNMY-GVQGSGPRTVGYPQMPNAAAIAAAFGGGLPPG 248
>gi|161079544|ref|NP_001097993.1| hephaestus, isoform M [Drosophila melanogaster]
gi|16589094|gb|AAL27010.1|AF436844_1 hephaestus [Drosophila melanogaster]
gi|158030461|gb|ABW08817.1| hephaestus, isoform M [Drosophila melanogaster]
Length = 568
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 184 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 243
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 244 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 282
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 250 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 289
>gi|449503770|ref|XP_004162168.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
[Cucumis sativus]
Length = 432
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I +M Y +T++VLH VF G V+KI F K+ G QALIQY Q
Sbjct: 92 GRGDEP-NRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQC 150
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
AV A+ AL+G IYDG C+L I +S +L + NN+RSRD+T PS P S+P G+
Sbjct: 151 AVSARTALQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP---SEPK--GR 204
Query: 172 QPVPMVGATANQY 184
P G T Y
Sbjct: 205 SSQPGYGDTGGMY 217
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 32/166 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS------------------ 43
G C L I +S +L V + + RSRD+TNP LP P +
Sbjct: 166 GCCQLDIQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRSSQPGYGDTGGMYPQMANAAA 225
Query: 44 ------GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
G L G+ G VL++++ + + D L +FS +G + +I + +N
Sbjct: 226 VAAAFGGGLPPGVSGTN--DRCTVLVSNLNPDR--IDEDKLFNLFSIYGNIVRIKLL-RN 280
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 281 KPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 323
>gi|50261257|gb|AAT72299.1| polypyrimidine tract binding protein [Drosophila melanogaster]
Length = 493
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 109 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 168
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 169 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 207
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 175 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 214
>gi|365813382|pdb|3ZZY|A Chain A, Crystal Structure Of A Raver1 Pri3 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
gi|365813383|pdb|3ZZY|B Chain B, Crystal Structure Of A Raver1 Pri3 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
gi|365813386|pdb|3ZZZ|A Chain A, Crystal Structure Of A Raver1 Pri4 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
gi|365813387|pdb|3ZZZ|B Chain B, Crystal Structure Of A Raver1 Pri4 Peptide In Complex With
Polypyrimidine Tract Binding Protein Rrm2
Length = 130
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 19 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 78
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
A AK +L+G IY+ C L I +S+ T L++K NND+SRDYT P P
Sbjct: 79 AQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP 126
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS 38
CTLRI +S T L+VK+ + +SRDYT P LP S
Sbjct: 96 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 130
>gi|281362950|ref|NP_001163789.1| hephaestus, isoform Q [Drosophila melanogaster]
gi|272477266|gb|ACZ95082.1| hephaestus, isoform Q [Drosophila melanogaster]
Length = 493
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 109 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 168
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 169 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 207
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 175 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 214
>gi|327263703|ref|XP_003216657.1| PREDICTED: regulator of differentiation 1-like [Anolis
carolinensis]
Length = 558
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVG---LDGKKLEPESNVLLA 64
I YS H +L +++R T L A SA+ + G G +G +S+VL
Sbjct: 134 IQYSNHRELKTDNLPNQAR--TQAALQ-AVSAVQSGGLALTGAPATEGGLPPGQSSVLRI 190
Query: 65 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 124
+EN+ Y VTL+VL+ +FS FG V KI F KN QAL+QY D A A+ AL+G I
Sbjct: 191 IVENLFYPVTLEVLYQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYARMALDGQNI 250
Query: 125 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
Y+ C L I +S+ T L++K NND+SRD+T P + QPS+
Sbjct: 251 YNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSL 293
>gi|161079541|ref|NP_001097992.1| hephaestus, isoform L [Drosophila melanogaster]
gi|158030460|gb|ABW08816.1| hephaestus, isoform L [Drosophila melanogaster]
Length = 622
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 238 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 297
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 298 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 336
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 304 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 343
>gi|25146814|ref|NP_741042.1| Protein PTB-1, isoform b [Caenorhabditis elegans]
gi|20338919|emb|CAD30435.1| Protein PTB-1, isoform b [Caenorhabditis elegans]
Length = 453
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 42 ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ 101
A+G +S G + +P S VL IENM + V+LDVL+ +F+ +G V +I F+KN Q
Sbjct: 51 ANGSVSNFEVGTQQQPNS-VLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQ 109
Query: 102 ALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AL+Q + +A +AK+ LE +Y+G C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 110 ALVQMSEANSAQLAKQGLENQNVYNGC-CTLRIDYSKLSTLNVKYNNDKSRDYTNPNLP 167
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSV 48
G CTLRI YS + L+VK+ + +SRDYTNP LP ++ + +S+
Sbjct: 135 GCCTLRIDYSKLSTLNVKYNNDKSRDYTNPNLPAGEMTLEQTIAMSI 181
>gi|390178277|ref|XP_003736615.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859388|gb|EIM52688.1| GA15927, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 572
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 188 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLD 247
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 248 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 286
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 254 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 293
>gi|449441197|ref|XP_004138369.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
isoform 1 [Cucumis sativus]
Length = 434
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I +M Y +T++VLH VF G V+KI F K+ G QALIQY Q
Sbjct: 94 GRGDEP-NRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQC 152
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
AV A+ AL+G IYDG C+L I +S +L + NN+RSRD+T PS P S+P G+
Sbjct: 153 AVSARTALQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP---SEPK--GR 206
Query: 172 QPVPMVGATANQY 184
P G T Y
Sbjct: 207 SSQPGYGDTGGMY 219
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 32/166 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS------------------ 43
G C L I +S +L V + + RSRD+TNP LP P +
Sbjct: 168 GCCQLDIQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRSSQPGYGDTGGMYPQMANAAA 227
Query: 44 ------GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
G L G+ G VL++++ + + D L +FS +G + +I + +N
Sbjct: 228 VAAAFGGGLPPGVSGTN--DRCTVLVSNLNPDR--IDEDKLFNLFSIYGNIVRIKLL-RN 282
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 283 KPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 325
>gi|195446082|ref|XP_002070619.1| GK10936 [Drosophila willistoni]
gi|194166704|gb|EDW81605.1| GK10936 [Drosophila willistoni]
Length = 629
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +E++ Y V+LD+LH +F +G V KI F KN QALIQYPD +A AK L+
Sbjct: 194 VLRVIVESLMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDAHSAQHAKSLLD 253
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ G C L I S+ T L++K NND+SRD+T P+ P
Sbjct: 254 GQNIYN-GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALP 292
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI S T L+VK+ + +SRD+TNP LP +D
Sbjct: 260 GCCTLRIDNSKLTALNVKYNNDKSRDFTNPALPPGEPGVD 299
>gi|427789193|gb|JAA60048.1| Putative hephaestus [Rhipicephalus pulchellus]
Length = 559
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 14/143 (9%)
Query: 18 VKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDV 77
V+F +HR N + +A + G + VL ++N Y VTLD+
Sbjct: 160 VQFSNHRELKTDNVHGALANQGGEGGG-------------ANTVLRVVVDNQIYPVTLDL 206
Query: 78 LHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137
LH +FS G V KI F K+ QALIQ+ DV A AK AL+G IY+ C L I YS
Sbjct: 207 LHSIFSRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN-ACCTLRIEYS 265
Query: 138 RHTDLSIKVNNDRSRDYTLPSTP 160
+ T+L++K NND+SRD+T P+ P
Sbjct: 266 KLTNLNVKYNNDKSRDFTNPTLP 288
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 70/176 (39%), Gaps = 59/176 (33%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV---------------------------- 35
CTLRI YS T+L+VK+ + +SRD+TNP LP
Sbjct: 258 CTLRIEYSKLTNLNVKYNNDKSRDFTNPTLPTGDPTLDIGLAGSLGILASPFAAAGPGLT 317
Query: 36 -------------------------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQ 70
APSA A G + L G+ S VLL S N Q
Sbjct: 318 SPLTAAYAASATAGLPLGGFALSPSAPSAATALGMAGIRLPGQ--ATTSCVLLVSNLNEQ 375
Query: 71 YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
VT D L +F +G V ++ +F+K ALIQ + Q A +A L+ +Y
Sbjct: 376 M-VTPDALFTLFGVYGDVIRVKILFNKKD--SALIQMAEPQQAQLAMSHLDKIKVY 428
>gi|427796833|gb|JAA63868.1| Putative hephaestus, partial [Rhipicephalus pulchellus]
Length = 554
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 14/143 (9%)
Query: 18 VKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDV 77
V+F +HR N + +A + G + VL ++N Y VTLD+
Sbjct: 155 VQFSNHRELKTDNVHGALANQGGEGGG-------------ANTVLRVVVDNQIYPVTLDL 201
Query: 78 LHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137
LH +FS G V KI F K+ QALIQ+ DV A AK AL+G IY+ C L I YS
Sbjct: 202 LHSIFSRAGKVLKIVTFTKSNSFQALIQFSDVMGAQAAKLALDGQSIYN-ACCTLRIEYS 260
Query: 138 RHTDLSIKVNNDRSRDYTLPSTP 160
+ T+L++K NND+SRD+T P+ P
Sbjct: 261 KLTNLNVKYNNDKSRDFTNPTLP 283
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 70/176 (39%), Gaps = 59/176 (33%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV---------------------------- 35
CTLRI YS T+L+VK+ + +SRD+TNP LP
Sbjct: 253 CTLRIEYSKLTNLNVKYNNDKSRDFTNPTLPTGDPTLDIGLAGSLGILASPFAAAGPGLT 312
Query: 36 -------------------------APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQ 70
APSA A G + L G+ S VLL S N Q
Sbjct: 313 SPLTAAYAASATAGLPLGGFALSPSAPSAATALGMAGIRLPGQ--ATTSCVLLVSNLNEQ 370
Query: 71 YAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
VT D L +F +G V ++ +F+K ALIQ + Q A +A L+ +Y
Sbjct: 371 M-VTPDALFTLFGVYGDVIRVKILFNKKD--SALIQMAEPQQAQLAMSHLDKIKVY 423
>gi|357497749|ref|XP_003619163.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355494178|gb|AES75381.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 318
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G++ EP + +LL ++ + Y +T+DVL VFS G V+KI F K+ G QALIQY Q+
Sbjct: 55 GREDEP-NRILLVTVHQVLYPMTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQS 113
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ AL+G +YD G C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 114 AVTARGALQGRNVYD-GCCQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 161
>gi|443711043|gb|ELU04990.1| hypothetical protein CAPTEDRAFT_200421 [Capitella teleta]
Length = 524
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +ENM Y VT+DVL +FS +G V KI F KN QALIQ+ D A AK +L
Sbjct: 139 VLRVIVENMLYPVTIDVLKSIFSRYGQVLKIVTFSKNNTFQALIQFSDQIAAQTAKVSLH 198
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGA 179
G IY+G C L I +S+ L++K NND+SRDYT P+ P + QP++ PV GA
Sbjct: 199 GQNIYNGC-CTLRIDFSKLQALNVKYNNDKSRDYTNPNLPSGDGQPAM----PVDAQGA 252
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 65/149 (43%), Gaps = 41/149 (27%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSA----IDASGQLSVGLDGKKL-- 55
G CTLRI +S L+VK+ + +SRDYTNP LP +DA G S+GL L
Sbjct: 205 GCCTLRIDFSKLQALNVKYNNDKSRDYTNPNLPSGDGQPAMPVDAQGAGSMGLSAAGLGA 264
Query: 56 ------------------------------EPESN-VLLASIENMQYAVTLDVLHMVFSA 84
+P++ VLL S N Q VT D L +F
Sbjct: 265 FQAAVPFSLAGLNAAAGLNAMNAAGLRLPGQPQTGAVLLVSNLNEQ-KVTPDALFTLFGV 323
Query: 85 FGPVQKIA-MFDKNGGLQALIQYPDVQTA 112
+G V ++ MF+K ALIQ+ D A
Sbjct: 324 YGDVIRVKIMFNKKDN--ALIQFADAAQA 350
>gi|354498135|ref|XP_003511171.1| PREDICTED: polypyrimidine tract-binding protein 1-like [Cricetulus
griseus]
gi|344255182|gb|EGW11286.1| Polypyrimidine tract-binding protein 1 [Cricetulus griseus]
Length = 575
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN Y VTL+VLH +FS FG V KI ++ KN Q L+QY +
Sbjct: 188 GTAVARQSPVLRILVENYFYQVTLEVLHQLFSRFGTVLKIIIYSKNSRFQVLLQYAHPLS 247
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 166
A AK L+G IYD C L I++S TDL++K NN++SRDYT P P +SQP
Sbjct: 248 AQRAKLFLDGQNIYDAC-CTLRIAFSGLTDLTVKYNNEKSRDYTRPDLPSGDSQP 301
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 90/221 (40%), Gaps = 68/221 (30%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPV----------------APSAIDAS---- 43
CTLRI +S TDL+VK+ + +SRDYT P LP AP I AS
Sbjct: 265 CTLRIAFSGLTDLTVKYNNEKSRDYTRPDLPSGDSQPLPAQKMTTAFGAPVVIAASPHAS 324
Query: 44 ---------GQLSVGLD----GKKLEP---------------------------ESNVLL 63
Q++ GL K L P + VLL
Sbjct: 325 PGVPHTFAFSQVAAGLAMPEVCKALAPLAVPEVVVAAAAAAAESTVVTSGSPGGANAVLL 384
Query: 64 ASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHC 123
+ N + VT L ++F A+G VQ++ + N AL+Q D A +A + L GH
Sbjct: 385 VANLNPE-KVTPQSLFILFGAYGNVQRVKIL-YNRKENALVQMADGCQAELALKHLNGHK 442
Query: 124 IYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
++ C I S+H LS+K+ + D L + VNS
Sbjct: 443 LHGKSLC---IMPSKH--LSVKLPREGKEDQGL-TKDYVNS 477
>gi|391330010|ref|XP_003739458.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Metaseiulus
occidentalis]
Length = 588
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 43 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 102
SG++S +G+ L + VL IEN Y +TLDVL+ +FS G V KI F+KN LQA
Sbjct: 215 SGEISPTHNGQTL---NTVLRVIIENQLYPITLDVLNSLFSRIGKVLKIVTFNKNNTLQA 271
Query: 103 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+QY D A AK L+G IY+ C L I YS+ L++K NND+SRD+T PS P
Sbjct: 272 LVQYGDALAAQAAKMTLDGQHIYNSC-CTLRIEYSKLQQLNVKYNNDKSRDFTNPSLP 328
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 46/176 (26%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQL----------------- 46
CTLRI YS L+VK+ + +SRD+TNP LP +D G
Sbjct: 298 CTLRIEYSKLQQLNVKYNNDKSRDFTNPSLPTGDPTLDNLGLANPLGMLHSPFANLGSHL 357
Query: 47 --------------------SVGLDGKKL--EPESNVLLASIENMQYAVTLDVLHMVFSA 84
++G+ +L P+S VLL S N Q VT D L +F
Sbjct: 358 TAAFNPPTLPLGGFALPAAQALGVASLRLPGTPQSCVLLVSNLNEQ-TVTPDALFTLFGV 416
Query: 85 FGPVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
+G V ++ MF+K ALIQ + Q A VA L+ ++ +L ++ S+H
Sbjct: 417 YGDVIRVKIMFNKKDS--ALIQMAEPQQAHVAMTHLDKIKLFGK---QLRVTPSKH 467
>gi|357497747|ref|XP_003619162.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
gi|355494177|gb|AES75380.1| Polypyrimidine tract-binding protein-like protein [Medicago
truncatula]
Length = 354
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G++ EP + +LL ++ + Y +T+DVL VFS G V+KI F K+ G QALIQY Q+
Sbjct: 91 GREDEP-NRILLVTVHQVLYPMTVDVLQQVFSPHGFVEKIVTFQKSAGFQALIQYETRQS 149
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AV A+ AL+G +YDG C+L I +S +L + NNDRSRD+T P+ P
Sbjct: 150 AVTARGALQGRNVYDGC-CQLDIQFSNLDELQVNYNNDRSRDFTNPNLP 197
>gi|157838029|ref|NP_001093477.1| polypyrimidine tract-binding protein 2 [Danio rerio]
Length = 538
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D A AK +L+
Sbjct: 174 VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLD 233
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 166
G IY+ C L I +S+ +L++K NND+SRDYT P P + QP
Sbjct: 234 GQNIYNSC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQP 278
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 80/207 (38%), Gaps = 54/207 (26%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA--------------------------- 36
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 242 CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSMAAALSKDSPSLLGTPSG 301
Query: 37 -----------PSAIDASGQLS-----------VGLDGKKLEPESNVLLASIENMQYAVT 74
PS++ A LS V L G + VLL S N + VT
Sbjct: 302 MVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSV--PGGVLLVSNLNDEM-VT 358
Query: 75 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134
L +F +G VQ++ + N ALIQ D A +A L G +Y G ++ +
Sbjct: 359 PQSLFTLFGVYGDVQRVKIL-YNKKDSALIQMSDGNQAQLAMSHLNGQKMY-GKIIRVTL 416
Query: 135 SYSRHTDLSIKVNNDRSRDYTLPSTPM 161
S + L + +D+ S+P+
Sbjct: 417 SKHQTVQLPREGLDDQGLTKDFTSSPL 443
>gi|395514526|ref|XP_003761466.1| PREDICTED: polypyrimidine tract-binding protein 3 [Sarcophilus
harrisii]
Length = 505
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG L++ G +G L +S VL +EN+ Y V+L+VL+ +FS FG V +I F KN
Sbjct: 138 SGSLALPAAQGNEGGVLPGQSPVLRIIVENLFYPVSLEVLYQIFSKFGTVLRIITFTKNN 197
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK AL+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 198 QFQALLQYADPLNAHYAKMALDGQNIYNAC-CTLRIDFSKLTSLNVKYNNDKSRDFTRLD 256
Query: 159 TPMVNSQPSI 168
P + QPSI
Sbjct: 257 LPSGDGQPSI 266
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 31/150 (20%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS--AIDASGQLSVGLD---------- 51
CTLRI +S T L+VK+ + +SRD+T LP +ID + + GL
Sbjct: 228 CTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPSGDGQPSIDPTMAAAFGLSVPAVPGALGP 287
Query: 52 ---------------GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFD 95
G P ++VLL S N A+T L ++F +G VQ++ MF+
Sbjct: 288 LTITTSAVTGRMAIPGVPGVPGNSVLLVSNLNPD-AITPHGLFILFGVYGDVQRVKIMFN 346
Query: 96 KNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
K AL+Q D A +A L G +Y
Sbjct: 347 KKE--NALVQMADANQAQLAINHLSGQRLY 374
>gi|334332915|ref|XP_001376108.2| PREDICTED: regulator of differentiation 1 [Monodelphis domestica]
Length = 582
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 43 SGQLSV----GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
SG L++ G +G L +S VL +EN+ Y VTL+VL+ +FS FG V +I F KN
Sbjct: 189 SGSLALTAAPGSEGGVLPGQSPVLRIIVENLFYPVTLEVLYQIFSKFGTVLRIITFTKNN 248
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
QAL+QY D A AK L+G IY+ C L I +S+ T L++K NND+SRD+T
Sbjct: 249 QFQALLQYADPLNAHYAKMTLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDFTRLD 307
Query: 159 TPMVNSQPSI 168
P + QPS+
Sbjct: 308 LPSGDGQPSL 317
>gi|209362272|gb|ACI43571.1| RBP50 [Cucurbita maxima]
Length = 445
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL +I +M Y +T++VLH VF G V+KI F K+ G QALIQY Q
Sbjct: 92 GRGDEP-NRILLVTIHHMLYPITVEVLHQVFFPHGFVEKIVTFQKSAGFQALIQYQTRQC 150
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
A+ A+ AL+G IYDG C+L I +S +L + NN+RSRD+T PS P
Sbjct: 151 AISARTALQGRNIYDGC-CQLDIQFSNLDELQVNYNNERSRDFTNPSLP 198
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 41/177 (23%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS----------------AIDASGQ 45
G C L I +S +L V + + RSRD+TNP LP P A+ ASG
Sbjct: 166 GCCQLDIQFSNLDELQVNYNNERSRDFTNPSLPSEPKGRPSQQPGYGDAGGMYALQASGA 225
Query: 46 LSVGL------------DGKKLEP-------ESNVLLASIENMQYAVTLDVLHMVFSAFG 86
VG G L P VL++++ + + D L +FS +G
Sbjct: 226 GPVGFPQMANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDR--IDEDKLFNLFSIYG 283
Query: 87 PVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+ +I + +N AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 284 NIARIKLL-RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNIT 336
>gi|345496639|ref|XP_001603240.2| PREDICTED: polypyrimidine tract-binding protein 1-like [Nasonia
vitripennis]
Length = 587
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 91/152 (59%), Gaps = 8/152 (5%)
Query: 38 SAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
+++ A+GQ V + P + VL +E+ Y ++LDVL+ +F+ +G V KI F KN
Sbjct: 176 TSVQAAGQGQVQGSETQGGPNT-VLRVIVEHQIYPISLDVLYQIFTRYGKVLKIVTFTKN 234
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
G QALIQY D+ +A AK L+G IY+ C L I YS+ +L++K NND+SRDYT P
Sbjct: 235 GTFQALIQYADMLSAQTAKFNLDGQNIYN-SCCTLRIDYSKMQNLNVKYNNDKSRDYTNP 293
Query: 158 STPM----VNSQPSILGQQPVP--MVGATANQ 183
+ P +++ LG + +P ++GA +Q
Sbjct: 294 TLPTGDANLDAASLALGGELLPQLLLGAAGSQ 325
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 55
CTLRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 266 CTLRIDYSKMQNLNVKYNNDKSRDYTNPTLPTGDANLDAA---SLALGGELL 314
>gi|350583628|ref|XP_003125947.3| PREDICTED: polypyrimidine tract-binding protein 2-like [Sus scrofa]
Length = 345
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 69 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 128
M Y VTLDVLH +FS FG V KI F KN QAL+QY D A AK AL+G IY+
Sbjct: 1 MYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNAC 60
Query: 129 FCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 61 -CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 99
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 39/167 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 61 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 120
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 121 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 178
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q++ + N ALIQ D + +A L G +Y G ++ +S
Sbjct: 179 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMY-GKIIRVTLS 223
>gi|223647466|gb|ACN10491.1| Polypyrimidine tract-binding protein 2 [Salmo salar]
Length = 540
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ + A A+ +L+
Sbjct: 173 VLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLD 232
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 233 GQNIYNSC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAV 279
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 241 CTLRIDFSKLVNLNVKYNNDKSRDYTRPELP 271
>gi|334702289|gb|AEG89704.1| polypyrimidine tract-binding protein 6 [Solanum tuberosum]
Length = 444
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G+ EP + +LL SI ++ Y +T++VLH VFS G V+KI F K+ G QALIQY QT
Sbjct: 92 GRGDEP-NRILLVSIHHVLYPITVEVLHQVFSPHGIVEKIVTFQKSAGFQALIQYELTQT 150
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
A+ A+ +L+G IYDG C+L I +S +L + NN+R RD+T P+ P
Sbjct: 151 AISARNSLQGRNIYDGC-CQLDIQFSNLDELQVSYNNERPRDFTNPNLP 198
>gi|328867981|gb|EGG16362.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 656
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
Query: 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
+E +N+LL +I N+ Y VT++VL+ +F +G V KI +F K+G Q+L+Q +++A+
Sbjct: 332 VETPNNILLVTISNIVYPVTIEVLYQLFGKYGSVLKILIFSKSGNFQSLVQLHSLESAIQ 391
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
AK L+G IY G C + I YS ++L IK NND+SRD+T P+ +++ PS +G
Sbjct: 392 AKRELDGQSIYSGC-CTMKIQYSSLSNLRIKYNNDKSRDFTNPT--LMSGIPSTIG 444
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 5/50 (10%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-PSAI----DASGQL 46
G CT++I YS+ ++L +K+ + +SRD+TNP L PS I +++GQL
Sbjct: 404 GCCTMKIQYSSLSNLRIKYNNDKSRDFTNPTLMSGIPSTIGFGNNSAGQL 453
>gi|432915659|ref|XP_004079197.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oryzias
latipes]
Length = 523
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
P S VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D A AK
Sbjct: 160 PPSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAK 219
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM-----VNSQPSILG 170
+L+G IY+ C L I +S+ +L++K NND+SRDYT P P N S+LG
Sbjct: 220 LSLDGQNIYNSC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPTGDGDSANKDHSLLG 277
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 53/186 (28%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAP--------SAIDA-SGQLS------- 47
CTLRI +S +L+VK+ + +SRDYT P LP S + SG L+
Sbjct: 232 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPTGDGDSANKDHSLLGTPSGALASYSSGGS 291
Query: 48 -----------------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVL 78
V L G + S VLLAS N + VT L
Sbjct: 292 YSSSLSLSQGGGAISPLSAAAAAAAAAGRVALSGSGV---SGVLLASNLN-EEMVTPQSL 347
Query: 79 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 138
+F +G VQ++ + N ALIQ D A +A L G ++ + ++ S+
Sbjct: 348 FTLFGVYGDVQRVKIL-YNKKDSALIQLSDGNQAQLAMSHLNGQKVFGK---VMRVTLSK 403
Query: 139 HTDLSI 144
H +++
Sbjct: 404 HQTVAL 409
>gi|156392443|ref|XP_001636058.1| predicted protein [Nematostella vectensis]
gi|156223157|gb|EDO43995.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 87/161 (54%), Gaps = 7/161 (4%)
Query: 8 ITYSAHTDLSVKFQSHR--SRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLAS 65
I YS H +L+ H R ++ +L ++ + +G+ G+ +L
Sbjct: 72 IQYSNHQELTTNESQHSPGVRGLSSSHLGAGIGSLTSG----LGIAGELPSVNGCILRII 127
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
+ENM Y +T++VL+ +F+ +G V KI +F +N QAL+Q+ A AK +L+G IY
Sbjct: 128 VENMLYPITIEVLNQIFTKYGTVLKIVIFTRNNQFQALVQFSQSTEARAAKCSLDGQNIY 187
Query: 126 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 166
+G C L I YS+ LS+K NND++RDYT P P S P
Sbjct: 188 NGC-CTLRIDYSKLKTLSVKYNNDKTRDYTRPDLPSGESTP 227
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 36/174 (20%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL-EPESN 60
G CTLRI YS LSVK+ + ++RDYT P LP S D S GL L P +
Sbjct: 189 GCCTLRIDYSKLKTLSVKYNNDKTRDYTRPDLPSGESTPDPSALGFAGLGTSVLGSPAAL 248
Query: 61 VL----------------------------LASIENM-QYAVTLDVLHMVFSAFGPVQKI 91
+ L + N+ + ++ D L +F +G VQ++
Sbjct: 249 LGFPGLGGLPLANLASLANAAPQRMPMGSPLVLVSNLNEEMISCDALFTLFGCYGDVQRV 308
Query: 92 A-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
+F+K AL+Q+ +V A A L G ++ ++ ++ S+HT +S+
Sbjct: 309 KILFNKKD--TALVQFANVHQAQTAIGHLNGVRVFGK---EMKVTNSKHTSVSL 357
>gi|302782650|ref|XP_002973098.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
gi|302790002|ref|XP_002976769.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300155807|gb|EFJ22438.1| hypothetical protein SELMODRAFT_105564 [Selaginella moellendorffii]
gi|300158851|gb|EFJ25472.1| hypothetical protein SELMODRAFT_173175 [Selaginella moellendorffii]
Length = 436
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
+LL +I + Y +T+DVLH VF+ G V+KI F K+ GLQALIQY + Q+AV AK L+
Sbjct: 106 ILLVTIHHPLYPITVDVLHQVFNPHGHVEKIVTFQKSAGLQALIQYNNQQSAVYAKSLLQ 165
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IYDG C L I +S +L + NN+R+RDYT S P
Sbjct: 166 GRNIYDGC-CTLDIQFSNLQELQVNFNNERTRDYTNSSLP 204
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 32/165 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAP----------------------SA 39
G CTL I +S +L V F + R+RDYTN LP P +A
Sbjct: 172 GCCTLDIQFSNLQELQVNFNNERTRDYTNSSLPNEPGRSQNPPGGNNMMVPMTPSAAAAA 231
Query: 40 IDASGQLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNG 98
+ G L G+ G E LL S N+ V D L +FS +G + +I M N
Sbjct: 232 AASGGTLPPGVTGTN---ERCTLLVS--NLAPEKVDADKLFNLFSNYGNIIRIKML-HNK 285
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
ALIQ D A +A L G +++ ++ +++S+H+ ++
Sbjct: 286 PDHALIQMGDGYQAELAVYYLRGTMLFEK---RMEVNFSKHSQIN 327
>gi|410904361|ref|XP_003965660.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Takifugu
rubripes]
Length = 481
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 11/156 (7%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTN--PYLPVAPSAIDASGQLSVGLDGK-KLEPESNVLLA 64
I YS H +L ++ + TN L +A SG ++ G DG+ + +S VL
Sbjct: 96 IQYSNHREL-------KTDNLTNQRAALQAISTAAMHSGTMAPGSDGRGVVHGQSPVLRI 148
Query: 65 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCI 124
+EN+ Y VTL+VL +FS FG V KI F +N QAL+Q+ D A AK +L+G I
Sbjct: 149 IVENLFYPVTLEVLQQIFSKFGSVLKIITFTRNNQFQALLQFSDAVHAQHAKASLDGQNI 208
Query: 125 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
Y+G C L I +S+ + L++K NND+SRD+T P
Sbjct: 209 YNGC-CTLRIDFSKLSALNVKYNNDKSRDFTRSDLP 243
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD-----GKKLE 56
G CTLRI +S + L+VK+ + +SRD+T LP A+ LS GL G +
Sbjct: 211 GCCTLRIDFSKLSALNVKYNNDKSRDFTRSDLPTGELDPTAAFTLSPGLSVAAVPGSLMS 270
Query: 57 PES-----------NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQALI 104
P +VLL S N + +V+ L ++F +G VQ++ +F+K AL+
Sbjct: 271 PPRVSLQMAPPAIHSVLLVSNLNPE-SVSPQCLFILFGVYGDVQRVKILFNKKEN--ALV 327
Query: 105 QYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
Q D A +A L G ++ G ++ +S
Sbjct: 328 QMSDATQAQLAMSHLNGQRLH-GNVIRVMLS 357
>gi|168012956|ref|XP_001759167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689480|gb|EDQ75851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 2/126 (1%)
Query: 41 DASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL 100
D SGQ ++L P + +LL +I N Y +T+DVLH VFS G V+KI F K+ GL
Sbjct: 64 DQSGQTRRLPAEQELLP-NRILLITIHNPLYPITVDVLHQVFSPHGFVEKIVTFTKSAGL 122
Query: 101 QALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
QAL+QY +AV A+ L+G IYDG C L I YS +L + NN+R+RD+T + P
Sbjct: 123 QALLQYASQSSAVQARSTLQGRNIYDGC-CTLDIQYSNLQELQVNYNNERTRDFTNAALP 181
Query: 161 MVNSQP 166
S+P
Sbjct: 182 SEQSRP 187
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 27/161 (16%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQ---------------- 45
G CTL I YS +L V + + R+RD+TN LP S G
Sbjct: 149 GCCTLDIQYSNLQELQVNYNNERTRDFTNAALPSEQSRPGNPGNNIMVAMGGASAAAAAF 208
Query: 46 ---LSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 102
L G+ G S +L++++ + + D L +FS +G + +I + N A
Sbjct: 209 GGVLPPGITGTN--DRSTLLVSNL--VPEKIDADRLFNLFSNYGNIVRIKIL-HNKPDHA 263
Query: 103 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
LIQ D A +A L+G ++ ++ +++S+H ++
Sbjct: 264 LIQMGDGFQAELAFNYLKGVTLFGK---RMDVNFSKHAQIN 301
>gi|241997960|ref|XP_002433623.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
gi|215495382|gb|EEC05023.1| polypyrimidine tract binding protein, putative [Ixodes scapularis]
Length = 512
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++N Y V+LD+LH +FS G V KI F K+ QALIQ+ DV A AK AL+
Sbjct: 173 VLRVVVDNQIYPVSLDLLHGIFSRAGKVLKIVTFTKSNTFQALIQFSDVMGAQAAKLALD 232
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IY+ C L I YS+ T+L++K NND+SRD+T P+ P
Sbjct: 233 GQSIYN-ACCTLRIEYSKLTNLNVKYNNDKSRDFTNPTLP 271
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 25/139 (17%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA------------------SGQ 45
CTLRI YS T+L+VK+ + +SRD+TNP LP +D S
Sbjct: 241 CTLRIEYSKLTNLNVKYNNDKSRDFTNPTLPTGDPTLDNLGLAGLPLGGFALSPSNPSAA 300
Query: 46 LSVGLDGKKL---EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-MFDKNGGLQ 101
++G+ G +L S VLL S N Q VT D L +F +G V ++ +F+K
Sbjct: 301 TALGMAGIRLPGQGTASCVLLVSNLNEQM-VTPDALFTLFGVYGDVIRVKILFNKKDS-- 357
Query: 102 ALIQYPDVQTAVVAKEALE 120
ALIQ + Q A +A L+
Sbjct: 358 ALIQMAEPQQAQLAMSHLD 376
>gi|196010463|ref|XP_002115096.1| hypothetical protein TRIADDRAFT_28601 [Trichoplax adhaerens]
gi|190582479|gb|EDV22552.1| hypothetical protein TRIADDRAFT_28601, partial [Trichoplax
adhaerens]
Length = 476
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 57 PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 115
PE+ VL SI+N+ Y VTLD+L+ +FS FG V+KI F KN QALIQ+ D A A
Sbjct: 120 PEAGRVLHISIDNLVYPVTLDILNQIFSKFGVVEKIITFTKNNLYQALIQFTDAVDAQNA 179
Query: 116 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN 163
K +L+G IY G C L I YS+ +++K NND+SRD+T T +N
Sbjct: 180 KLSLDGQSIYYGC-CTLKIDYSKLLSINVKYNNDKSRDFTKNVTTRIN 226
>gi|440804444|gb|ELR25321.1| hnRNPL/PTB/hephaestus splicing factor subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 575
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 115
E +++LL ++ N+ Y VT+D+LH VFS +G + KI +F K G QALIQ D A A
Sbjct: 202 EQSNHILLVTVTNLVYPVTIDILHQVFSKYGAIHKIVIFSKK-GFQALIQMGDKNQAQAA 260
Query: 116 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
K+AL+G IY G C L I YS L++K NND+SRD+T + P ++ +GQ
Sbjct: 261 KQALDGQNIYSGC-CTLRIQYSNLPSLNVKYNNDKSRDFTNNNLPSGDAAGPAVGQ 315
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 42/190 (22%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLD--GKKLEPES 59
G CTLRI YS L+VK+ + +SRD+TN LP +A A GQ L+ G L P++
Sbjct: 272 GCCTLRIQYSNLPSLNVKYNNDKSRDFTNNNLPSGDAAGPAVGQFGGALNPLGLGLFPDA 331
Query: 60 N------------------------------VLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
+ +++ +E + VT DVL +F +G V
Sbjct: 332 SYGGYHVSPAAFGYGQKQGAVGMAMGMGPSVLIVNGLEAER--VTPDVLFTLFGVYGDVL 389
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
++ + N AL+Q+ Q A A L ++ L I++S+H +++
Sbjct: 390 RVKIL-YNKTDTALVQFATPQQAETALANLNQAPLFGR---TLTINFSKHNTIAMPREGT 445
Query: 150 R----SRDYT 155
++DYT
Sbjct: 446 EGAHLTKDYT 455
>gi|348531446|ref|XP_003453220.1| PREDICTED: polypyrimidine tract-binding protein 2-like [Oreochromis
niloticus]
Length = 523
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
P S VL I+NM Y VTLDVL +FS FG V KI F KN QAL+Q+ D A AK
Sbjct: 160 PPSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAK 219
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM-----VNSQPSILG 170
+L+G IY+ C L I +S+ ++++K NND+SRDYT P P N S+LG
Sbjct: 220 LSLDGQNIYNSC-CTLRIDFSKLVNVNVKYNNDKSRDYTRPDLPTGDGESTNKDHSLLG 277
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 73/186 (39%), Gaps = 53/186 (28%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA---------SGQLS------- 47
CTLRI +S +++VK+ + +SRDYT P LP SG L+
Sbjct: 232 CTLRIDFSKLVNVNVKYNNDKSRDYTRPDLPTGDGESTNKDHSLLGTPSGALASYSSGGG 291
Query: 48 -----------------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVL 78
V L G + S VLLAS N + VT L
Sbjct: 292 YSSSLSLSQGGGAISPLSAAAAAAAAAGRVALSGSGV---SGVLLASNLN-EEMVTPQSL 347
Query: 79 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 138
+F +G VQ++ + N ALIQ D A +A L G ++ + ++ S+
Sbjct: 348 FTLFGVYGDVQRVKIL-YNKKDSALIQLSDGNQAQLAMSHLNGQKVFGK---VMRVTLSK 403
Query: 139 HTDLSI 144
H +++
Sbjct: 404 HQTVAL 409
>gi|168017642|ref|XP_001761356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687362|gb|EDQ73745.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +LL +I N Y +T+DVLH VFS G V+KI F K+ GLQAL+QY +AV A+
Sbjct: 104 NRILLITIHNPLYPITVDVLHQVFSPHGFVEKIVTFTKSAGLQALLQYASQPSAVQARTT 163
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L+G IYDG C L I YS +L + NN+R+RD+T + P S+P G + ++G
Sbjct: 164 LQGRNIYDGC-CTLDIQYSNLQELQVNYNNERTRDFTNAALPSEQSRPGNSGNNIMVLLG 222
Query: 179 A 179
Sbjct: 223 C 223
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDG--------- 52
G CTL I YS +L V + + R+RD+TN LP S SG + L G
Sbjct: 172 GCCTLDIQYSNLQELQVNYNNERTRDFTNAALPSEQSRPGNSGNNIMVLLGCLYLVAMGG 231
Query: 53 ----------------KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 96
S +L++++ + + D L +FS +G + +I +
Sbjct: 232 ASAAAAAFGGVLPPGITGTNDRSTLLVSNL--VPEKIDADRLFNLFSNYGNIVRIKIL-H 288
Query: 97 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
N ALIQ D A +A L+G ++ ++ +++S+H ++
Sbjct: 289 NKPDHALIQMGDGFQAELAFNYLKGVTLFGK---RMDVNFSKHAQIN 332
>gi|390332444|ref|XP_003723502.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 5
[Strongylocentrotus purpuratus]
Length = 555
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 212 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 271
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 272 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 307
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 33/162 (20%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTN---------------------PYLPVAPSAI-- 40
C LRI +S T+LSVK+ + +SRDYT P P SA+
Sbjct: 282 CQLRIDFSKLTNLSVKYNNEKSRDYTCDLPQGDGLTGVDPSTAAMLGVPGFPAGLSALPH 341
Query: 41 -DASGQLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIA-MFDKN 97
A+ + + G + S+V+L S N+ VT L +F +G VQ++ +++K
Sbjct: 342 HAAAAAQGMRMPGMYMPSGSSVILVS--NLTPELVTPQALFTLFGVYGDVQRVKILYEKR 399
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
ALIQ D + +A + L G +Y ++ ++ S+H
Sbjct: 400 DN--ALIQMSDPNQSQLAMKHLSGVKLYGK---QIRVTASKH 436
>gi|115634663|ref|XP_001176080.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 617
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 240 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 299
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 300 LDGKNIYNNC-CQLRIDFSKLTNLSVKYNNEKSRDYT 335
>gi|390332442|ref|XP_003723501.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 4
[Strongylocentrotus purpuratus]
Length = 662
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 319 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 378
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 379 LDGKNIYNNC-CQLRIDFSKLTNLSVKYNNEKSRDYT 414
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 33/162 (20%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTN---------------------PYLPVAPSAI-- 40
C LRI +S T+LSVK+ + +SRDYT P P SA+
Sbjct: 389 CQLRIDFSKLTNLSVKYNNEKSRDYTCDLPQGDGLTGVDPSTAAMLGVPGFPAGLSALPH 448
Query: 41 -DASGQLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIA-MFDKN 97
A+ + + G + S+V+L S N+ VT L +F +G VQ++ +++K
Sbjct: 449 HAAAAAQGMRMPGMYMPSGSSVILVS--NLTPELVTPQALFTLFGVYGDVQRVKILYEKR 506
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
ALIQ D + +A + L G +Y ++ ++ S+H
Sbjct: 507 DN--ALIQMSDPNQSQLAMKHLSGVKLYGK---QIRVTASKH 543
>gi|390332437|ref|XP_003723500.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 649
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 272 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 331
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 332 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 367
>gi|85003003|gb|ABC68595.1| polypyrimidine tract binding protein [Paracentrotus lividus]
Length = 618
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 242 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFADASQAAVAKLE 301
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 302 LDGKNIYNNC-CQLRIDFSKLTNLSVKYNNEKSRDYT 337
>gi|363744882|ref|XP_424912.3| PREDICTED: regulator of differentiation 1 [Gallus gallus]
Length = 552
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 93/191 (48%), Gaps = 33/191 (17%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
S+VL IEN+ Y V+L+VL+ +FS FG V KI F +N QALIQY + A AK A
Sbjct: 197 SSVLRIIIENLFYPVSLEVLYQIFSKFGFVLKIVTFTRNNQFQALIQYAEPVNAYYAKMA 256
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPV--PM 176
L G IY+ C LHI +S+ T L +K NN++SRD+T P + GQ P+ +
Sbjct: 257 LNGRNIYNAC-CTLHIDFSKLTSLKVKYNNEKSRDFTRFDLPAAD------GQLPLDPAI 309
Query: 177 VGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPG 236
+ A +Q G F P G G + P + Y P G++
Sbjct: 310 IAAFGSQ--GIIFQP------------YVGTGGIGPVT----------YFPQGAVTTSVA 345
Query: 237 MMQMHMPGQSG 247
++M PG G
Sbjct: 346 SVRMSNPGVPG 356
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 44/191 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-------PSAIDA-------------- 42
CTL I +S T L VK+ + +SRD+T LP A P+ I A
Sbjct: 267 CTLHIDFSKLTSLKVKYNNEKSRDFTRFDLPAADGQLPLDPAIIAAFGSQGIIFQPYVGT 326
Query: 43 ----------SGQLSVGLDGKKLE----PESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
G ++ + ++ P ++VLL S N + A+T L ++F A+G V
Sbjct: 327 GGIGPVTYFPQGAVTTSVASVRMSNPGVPGNSVLLVSNLNPE-AITPHGLFILFGAYGDV 385
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI---- 144
++ + KN AL+Q D A +A L G +Y G F + + S+H ++ +
Sbjct: 386 LRVKIMFKNKE-NALVQMADATQAQIAISNLNGQKLY-GKFIR--ATLSKHQNIQLPREG 441
Query: 145 KVNNDRSRDYT 155
+ +N ++DY+
Sbjct: 442 EEDNGLTKDYS 452
>gi|301103606|ref|XP_002900889.1| polypyrimidine tract-binding protein, putative [Phytophthora
infestans T30-4]
gi|262101644|gb|EEY59696.1| polypyrimidine tract-binding protein, putative [Phytophthora
infestans T30-4]
Length = 655
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 6/124 (4%)
Query: 41 DASGQLSV-GLDG--KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
D GQL + +DG + + P + +L+ S+ ++Y VT+DVL VF FG VQKI F K+
Sbjct: 146 DNGGQLGLLPIDGPRRGIGPPNQILMVSVSKIEYDVTVDVLQQVFQKFGNVQKIVTFWKD 205
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTL 156
++L+Q V A A+ AL+G IY G C +L I +SRH +L ++ N+DRSRDYT
Sbjct: 206 NEFKSLVQMESVDQAQAAQSALDGRDIYTG--CNQLSIVFSRHPELRVRYNDDRSRDYTN 263
Query: 157 PSTP 160
P+ P
Sbjct: 264 PNLP 267
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNV 61
G L I +S H +L V++ RSRDYTNP LP P G D + EP + +
Sbjct: 235 GCNQLSIVFSRHPELRVRYNDDRSRDYTNPNLPPGPG--------RGGDDRNEGEPATTI 286
Query: 62 LLASIENMQYAV 73
L E QY++
Sbjct: 287 LSDRREPPQYSI 298
>gi|390332446|ref|XP_003723503.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 6
[Strongylocentrotus purpuratus]
Length = 603
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 260 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 319
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 320 LDGKNIYNNC-CQLRIDFSKLTNLSVKYNNEKSRDYT 355
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 33/162 (20%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTN---------------------PYLPVAPSAI-- 40
C LRI +S T+LSVK+ + +SRDYT P P SA+
Sbjct: 330 CQLRIDFSKLTNLSVKYNNEKSRDYTCDLPQGDGLTGVDPSTAAMLGVPGFPAGLSALPH 389
Query: 41 -DASGQLSVGLDGKKLEPESNVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIA-MFDKN 97
A+ + + G + S+V+L S N+ VT L +F +G VQ++ +++K
Sbjct: 390 HAAAAAQGMRMPGMYMPSGSSVILVS--NLTPELVTPQALFTLFGVYGDVQRVKILYEKR 447
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
ALIQ D + +A + L G +Y ++ ++ S+H
Sbjct: 448 DN--ALIQMSDPNQSQLAMKHLSGVKLYGK---QIRVTASKH 484
>gi|390332439|ref|XP_780392.3| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 7
[Strongylocentrotus purpuratus]
Length = 659
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 282 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 341
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 342 LDGKNIYNNC-CQLRIDFSKLTNLSVKYNNEKSRDYT 377
>gi|390332435|ref|XP_003723499.1| PREDICTED: polypyrimidine tract-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 631
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +L +EN+ Y +T+D LH +F +G V +I F K+G QAL+Q+ D A VAK
Sbjct: 254 NTILRVIVENVTYQITVDTLHEIFRKYGTVLRIVTFIKSGQFQALVQFSDASQAAVAKLE 313
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
L+G IY+ C+L I +S+ T+LS+K NN++SRDYT
Sbjct: 314 LDGKNIYN-NCCQLRIDFSKLTNLSVKYNNEKSRDYT 349
>gi|328869052|gb|EGG17430.1| hypothetical protein DFA_08425 [Dictyostelium fasciculatum]
Length = 603
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 115
P N+LL +IEN V +D+L+ FS +G V +I +F+K+ LQAL++Y + A A
Sbjct: 122 RPIGNILLCTIENATMTVNVDLLNHFFSLYGEVLRIVIFNKSVNLQALVEYSSPELAFHA 181
Query: 116 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT--LPS 158
K+ L+G +Y GG+C L I S+ L++ +NNDR+RDYT LPS
Sbjct: 182 KKLLQGAMLYQGGYCVLRIEISKVDRLNVTLNNDRTRDYTKNLPS 226
>gi|198434992|ref|XP_002131695.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 1 [Ciona intestinalis]
Length = 528
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +ENM Y +TLDVLH +F+ FG V K F KN QAL+Q D + AK +L+
Sbjct: 149 VLRVVVENMLYPITLDVLHTIFTKFGVVLKTITFTKNNQFQALLQMGDAIQSQTAKLSLD 208
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 173
G IY+G C L I YS+ L++K NND+SRDYT P + + SIL P
Sbjct: 209 GQNIYNGC-CTLRIEYSKLPALNVKYNNDKSRDYTRNDLP--SGESSILNNPP 258
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 40
G CTLRI YS L+VK+ + +SRDYT LP S+I
Sbjct: 215 GCCTLRIEYSKLPALNVKYNNDKSRDYTRNDLPSGESSI 253
>gi|294460075|gb|ADE75620.1| unknown [Picea sitchensis]
Length = 471
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ +LL +I ++ + +T++VLH VFS G V+KI F K+ GLQALIQY Q AV AK
Sbjct: 103 NRILLVTIHHLLFPITVEVLHQVFSPCGFVEKIVTFQKSAGLQALIQYTSQQNAVQAKNN 162
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+G IYDG C+L I +S L + N+RSRD+T PS P
Sbjct: 163 LQGRNIYDGC-CQLDIQFSNLNGLQVHYINERSRDFTNPSLP 203
>gi|198434994|ref|XP_002131704.1| PREDICTED: similar to polypyrimidine tract binding protein-like
isoform 2 [Ciona intestinalis]
Length = 495
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL +ENM Y +TLDVLH +F+ FG V K F KN QAL+Q D + AK +L+
Sbjct: 149 VLRVVVENMLYPITLDVLHTIFTKFGVVLKTITFTKNNQFQALLQMGDAIQSQTAKLSLD 208
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 173
G IY+G C L I YS+ L++K NND+SRDYT P + + SIL P
Sbjct: 209 GQNIYNGC-CTLRIEYSKLPALNVKYNNDKSRDYTRNDLP--SGESSILNNPP 258
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAI 40
G CTLRI YS L+VK+ + +SRDYT LP S+I
Sbjct: 215 GCCTLRIEYSKLPALNVKYNNDKSRDYTRNDLPSGESSI 253
>gi|413955316|gb|AFW87965.1| hypothetical protein ZEAMMB73_428640 [Zea mays]
Length = 269
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 7/100 (7%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 148 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 207
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIKVNN 148
AKE+L+G I C L IS+S H DL+IK +
Sbjct: 208 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIKFQS 247
>gi|348686489|gb|EGZ26304.1| hypothetical protein PHYSODRAFT_350288 [Phytophthora sojae]
Length = 649
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
P + +L+ S+ ++Y VT+DVL VF FG V+KI F K+ +AL+Q V A A+
Sbjct: 164 PPNQILMVSVSKIEYDVTVDVLQQVFQKFGNVEKIVTFWKDNEFKALVQMESVDQAQAAQ 223
Query: 117 EALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
AL+G IY G C +L I +SRH +L ++ N+DRSRDYT P+ P
Sbjct: 224 SALDGRDIYTG--CNQLSIVFSRHPELRVRYNDDRSRDYTNPNLP 266
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAP 37
G L I +S H +L V++ RSRDYTNP LP P
Sbjct: 234 GCNQLSIVFSRHPELRVRYNDDRSRDYTNPNLPPGP 269
>gi|432101132|gb|ELK29416.1| Polypyrimidine tract-binding protein 1 [Myotis davidii]
Length = 566
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 76/144 (52%), Gaps = 28/144 (19%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD--- 108
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY +
Sbjct: 182 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVS 241
Query: 109 VQTAVV------------------------AKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
Q A + AK +L+G IY+ C L I +S+ T L++
Sbjct: 242 AQHAKLIITFTKNKQFQALLQYAEPVSAQHAKLSLDGQNIYNAC-CTLRIDFSKLTSLNV 300
Query: 145 KVNNDRSRDYTLPSTPMVNSQPSI 168
K NND+SRDYT P P +SQPS+
Sbjct: 301 KYNNDKSRDYTRPDLPSGDSQPSL 324
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 79/181 (43%), Gaps = 55/181 (30%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPS------AIDASGQLSV--------- 48
CTLRI +S T L+VK+ + +SRDYT P LP S + A+ LSV
Sbjct: 286 CTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAP 345
Query: 49 -------------------GLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
GL G ++VLL S N + VT L ++F +G VQ
Sbjct: 346 LAIPSAAAAAAAAGRIAIPGLGG----AGNSVLLVSNLNPE-VVTPQSLFILFGVYGDVQ 400
Query: 90 KIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH-----ISYSRHTDLS 143
++ +F+K AL+Q D A +A L GH KLH I+ S+H ++
Sbjct: 401 RVKILFNKKEN--ALVQMADGSQAQLAMSHLNGH--------KLHGKPVRITLSKHQNVQ 450
Query: 144 I 144
+
Sbjct: 451 L 451
>gi|297275604|ref|XP_002801040.1| PREDICTED: polypyrimidine tract-binding protein 1 [Macaca mulatta]
Length = 549
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK + +G IY+ C L NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSQDGQNIYNAC-CTLRXXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSL--- 288
Query: 172 QPVPMVGATANQYNGAQFAP 191
M A A+ Y GA F P
Sbjct: 289 -DQTMAAAFASPYAGAGFPP 307
>gi|413955317|gb|AFW87966.1| hypothetical protein ZEAMMB73_428640 [Zea mays]
Length = 229
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Query: 56 EPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
E NVLL +IE +Q + VT+DV+HMVFSAFG V KIA F+K G QALIQY D TA
Sbjct: 108 ETAGNVLLVTIEGVQSSDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASA 167
Query: 115 AKEALEGHCI------YDGGFCKLHISYSRHTDLSIK 145
AKE+L+G I C L IS+S H DL+IK
Sbjct: 168 AKESLDGRSIPSYLLPEHVTSCCLRISFSAHKDLNIK 204
>gi|297275608|ref|XP_001092088.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 1 [Macaca
mulatta]
Length = 556
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK + +G IY+ C L NND+SRDYT P P +SQPS L Q
Sbjct: 233 AQHAKLSQDGQNIYN-ACCTLRXXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPS-LDQ 290
Query: 172 QPVPMVGA----TANQYNGAQFAP 191
GA +A+ Y GA F P
Sbjct: 291 TMAAAFGAPGIISASPYAGAGFPP 314
>gi|294461205|gb|ADE76165.1| unknown [Picea sitchensis]
Length = 461
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
+LL +I ++ Y +T++VLH VFS G V+KI +F K GLQA +QY Q A+ A L+
Sbjct: 105 ILLVTIHHLLYPITVEVLHQVFSPHGFVEKIVIFQK-SGLQAFVQYSSRQNAIQASNTLQ 163
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
G IYDG C+L I +S +L + NN+R+RD+T PS P
Sbjct: 164 GRNIYDGC-CQLDIQFSNLPELQVNYNNERTRDFTNPSLP 202
>gi|405953685|gb|EKC21299.1| Regulator of differentiation 1 [Crassostrea gigas]
Length = 764
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+ L +E++ Y V ++VL+ +FS FG V K+ +F KN QALIQ D A AK
Sbjct: 391 KRTTLRIIVEHLVYPVGIEVLYQIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKL 450
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
+L+G IY+ G C L I YS+ +L++K NND+SRD+T P+ P
Sbjct: 451 SLDGQNIYN-GCCTLRIDYSKLNNLNVKYNNDKSRDFTNPNLP 492
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAID 41
G CTLRI YS +L+VK+ + +SRD+TNP LP +D
Sbjct: 460 GCCTLRIDYSKLNNLNVKYNNDKSRDFTNPNLPSGDPGLD 499
>gi|255566638|ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
gi|223536394|gb|EEF38043.1| polypyrimidine tract binding protein, putative [Ricinus communis]
Length = 437
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 73 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132
+ ++VLH VFS G V+KI F K+ G QALIQY Q+AV A+ AL+G IYDG C+L
Sbjct: 113 IIVEVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQLRQSAVAARTALQGRNIYDGC-CQL 171
Query: 133 HISYSRHTDLSIKVNNDRSRDYTLPSTP 160
I +S +L + NNDRSRD+T P P
Sbjct: 172 DIQFSNLDELQVNYNNDRSRDFTNPHLP 199
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 32/166 (19%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDAS------------------ 43
G C L I +S +L V + + RSRD+TNP+LP +
Sbjct: 167 GCCQLDIQFSNLDELQVNYNNDRSRDFTNPHLPAEQKGRSSQAGYGDAGVAYPQMANAAA 226
Query: 44 ------GQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
G L G+ G VL++++ + + D L +FS +G + +I + +N
Sbjct: 227 IAAAFGGGLPPGISGTN--DRCTVLVSNLNPDK--IDEDKLFNLFSLYGNIVRIKLL-RN 281
Query: 98 GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
AL+Q D A +A L+G ++ +L +++S+H +++
Sbjct: 282 KPDHALVQMGDGFQAELAVHFLKGAVLFGK---RLEVNFSKHPNIT 324
>gi|294909465|ref|XP_002777772.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239885734|gb|EER09567.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 632
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 18 VKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGK-----KLEPESN----VLLASIEN 68
++F+ S Y P I +L G+ + +P+SN +LL +I N
Sbjct: 99 IEFEDESSAIKCYTYYNANPLLITGH-RLEFAFSGRSEITARRDPDSNPPNRILLFTITN 157
Query: 69 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 128
+ Y VT+DV+ V + FG ++K+ +F++ +QAL+Q DV TA VAKE L+G IY G
Sbjct: 158 LVYPVTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADVDTANVAKEQLDGQNIY-AG 216
Query: 129 FCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
+ + YS L +K NN+RS D+T PS
Sbjct: 217 CNTIKVQYSSLPQLEVKHNNERSWDFTNPS 246
>gi|297275606|ref|XP_001092214.2| PREDICTED: polypyrimidine tract-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 530
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 173 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 232
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
A AK + +G IY+ C L NND+SRDYT P P +SQPS+
Sbjct: 233 AQHAKLSQDGQNIYN-ACCTLRXXXXXXXXXXXXYNNDKSRDYTRPDLPSGDSQPSL 288
>gi|321459460|gb|EFX70513.1| hypothetical protein DAPPUDRAFT_328086 [Daphnia pulex]
Length = 439
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 77/121 (63%), Gaps = 7/121 (5%)
Query: 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
PE+++LL +I N Y +T+DVLH + AFG V +I +F K+ G+QA++++ +V A AK
Sbjct: 14 PENHILLFTIVNPVYPITVDVLHTITQAFGEVLRIVIFKKH-GVQAMVEFANVDMARAAK 72
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPM 176
E L+G IY G C L I Y++ T L++ N+ + DYT P TP +SQ Q+P P+
Sbjct: 73 EGLDGADIYS-GCCTLKIEYAKPTRLNVHKNDSETWDYTTP-TPGADSQR----QRPAPL 126
Query: 177 V 177
+
Sbjct: 127 L 127
>gi|390466248|ref|XP_003733548.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 2 [Callithrix jacchus]
Length = 499
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 58 ESNVLLASIENMQYAVTLDVL-HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
+S VL I+NM Y VT +FS FG V KI F KN QAL+QY D A AK
Sbjct: 185 QSPVLRIIIDNMYYPVTXXXXTKXIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAK 244
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 245 LALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 295
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI +S +L+VK+ + +SRDYT P LP
Sbjct: 257 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP 287
>gi|313234966|emb|CBY24911.1| unnamed protein product [Oikopleura dioica]
Length = 788
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
++VL +ENM Y TL+VL +FS FG V K+ F KN QALIQ A AK +
Sbjct: 424 NHVLRVVVENMTYPTTLEVLTHLFSQFGNVLKVITFTKNNQFQALIQMDCESNAQAAKLS 483
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 167
L+G +Y C L I YS+ L++K NN++SRDYT P P + S
Sbjct: 484 LDGKNVYTNC-CTLRIDYSKLQQLNVKFNNEKSRDYTRPELPQCDDYNS 531
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
++VL +ENM Y TL+VL +FS FG V K+ F KN QALIQ A K
Sbjct: 254 NHVLRVVVENMTYPTTLEVLTHLFSQFGNVLKVITFTKNNQFQALIQMDCESNAQAMKTE 313
Query: 119 LEG 121
EG
Sbjct: 314 DEG 316
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 50/196 (25%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP---------------VAPSAIDASGQL-- 46
CTLRI YS L+VKF + +SRDYT P LP + P GQ
Sbjct: 494 CTLRIDYSKLQQLNVKFNNEKSRDYTRPELPQCDDYNSHQHHSQQMIQPYQSGLMGQAPQ 553
Query: 47 SVGLDGKKLEP-----ESNV------------------LLASIENMQYAVTLDVLHMVFS 83
G+ + P NV L+A+++ + +T D+L +F
Sbjct: 554 LAGIPTSMMSPIPSIQNHNVPSPYQHASAPPSSGPTVLLVANLDEQR--ITCDILFTLFG 611
Query: 84 AFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS 143
+G V ++ + N AL+Q D A A L ++D + + +S+H +
Sbjct: 612 VYGNVLRVKIL-YNKKDNALLQMADNHQATTALTHLNSRVLHDK---PIRVVFSKHQQVQ 667
Query: 144 IKVNNDR----SRDYT 155
+ +N ++D+T
Sbjct: 668 LPKDNHEACVLTKDFT 683
>gi|294955170|ref|XP_002788430.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239903853|gb|EER20226.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 366
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 18 VKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGK-----KLEPESN----VLLASIEN 68
++F+ S Y P I +L G+ + +P+SN +LL +I N
Sbjct: 54 IEFEDESSAIKCYTYYNANPLLITGH-RLEFAFSGRSEITARRDPDSNPPNRILLFTITN 112
Query: 69 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 128
+ Y VT+DV+ V + FG ++K+ +F++ +QAL+Q DV TA VAKE L+G IY G
Sbjct: 113 LVYPVTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADVDTANVAKEQLDGQNIY-AG 171
Query: 129 FCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
+ + YS L +K NN+RS D+T PS
Sbjct: 172 CNTIKVQYSSLPQLEVKHNNERSWDFTNPS 201
>gi|348524683|ref|XP_003449852.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oreochromis niloticus]
Length = 518
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 92/177 (51%), Gaps = 16/177 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGHPAFINYSTSQKISRPGDSDDTRSVNNVLLLTIINPIYPITTDVLYTICNNCGPVQ 161
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPARLNVFKNDQ 219
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMVG--ATANQYNGAQFAPPPP 194
+ DYT P+ P N QP++LG P G + YN + PPPP
Sbjct: 220 DTWDYTNPNLSGQGDPNANPNKRQRQPALLGDHPPDYGGPQGGYHGYNDDSYGPPPP 276
>gi|432895625|ref|XP_004076081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Oryzias
latipes]
Length = 529
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 27/190 (14%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGHPAFINYSTSQKISRPGDSDDTRSVNNVLLLTILNPIYPITTDVLYTICNNCGPVQ 161
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 219
Query: 150 RSRDYTLPS----------------TPMVN-----SQPSILGQQPVPMVG--ATANQYNG 186
+ DYT P+ P N QP++LG P G + + YN
Sbjct: 220 DTWDYTNPNLSSQDADGEGNWNNSQDPNANPNKRQRQPALLGDHPPDYGGPQGSYHAYND 279
Query: 187 AQFAPPPPEQ 196
+ PPPP +
Sbjct: 280 DAYGPPPPHR 289
>gi|330801720|ref|XP_003288872.1| hypothetical protein DICPUDRAFT_55687 [Dictyostelium purpureum]
gi|325081065|gb|EGC34595.1| hypothetical protein DICPUDRAFT_55687 [Dictyostelium purpureum]
Length = 663
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 61 VLLASIENM-QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
VLL +IE+ +++T+D L+ FS+ G V +I MF KN LQALI++ V A+ AK+ L
Sbjct: 177 VLLCTIESQANHSITIDHLYHAFSSCGEVLRIVMFTKNN-LQALIEFSSVDNALNAKKTL 235
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
GH ++ GG CKL + S+ L+I N DR++DYT
Sbjct: 236 FGHALFHGGQCKLKLEISKTDRLNITQNTDRAKDYT 271
>gi|66820074|ref|XP_643683.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
gi|60471793|gb|EAL69748.1| hypothetical protein DDB_G0275365 [Dictyostelium discoideum AX4]
Length = 695
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 61 VLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
VLL++IEN ++T+D L+ VFS+ G V +I MF+KN LQALI++ V++A+ AK+ L
Sbjct: 156 VLLSTIENPGSNSITIDHLYHVFSSCGEVLRIVMFNKNN-LQALIEFSTVESALHAKKTL 214
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN 163
H ++ GG C L + S+ L+I N DR++D++ S P VN
Sbjct: 215 SNHSLFHGGQCTLKLEVSKTDRLNITQNTDRAKDFS-KSLPTVN 257
>gi|449267533|gb|EMC78469.1| Regulator of differentiation 1, partial [Columba livia]
Length = 499
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 7/131 (5%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++N+ + ++L++LH + S FGPV +I +F K G QAL +Y + ++A AK+ L
Sbjct: 136 VLRIIVDNVSHHISLEMLHEILSPFGPVLRIIIFTKYGKFQALAEYDNPRSAYCAKKTLN 195
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGAT 180
G I+ C + + YS+ T L+IK NN++SRD+T P + Q I QP+
Sbjct: 196 GQGIFTSD-CFIRVDYSKFTSLAIKYNNEKSRDFTRLDLPSGDGQ--IYMDQPIAAAYGI 252
Query: 181 ANQ----YNGA 187
N Y GA
Sbjct: 253 QNNIVPSYTGA 263
>gi|397507212|ref|XP_003824099.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pan paniscus]
Length = 541
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLS-----VGLD-GKKLEP 57
+ I +S H L +++RD P A A+++ SG L+ +D G +
Sbjct: 126 IYIQFSNHKGLKTDSSPNQARD------PAAXQAVNSVQSGNLAWTAPEAAVDAGMGMAG 179
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y +TLDVLH +FS FG V+ I F K+ QAL+QY D + A K
Sbjct: 180 QSPVLRIIVENLFYPMTLDVLHQIFSKFGTVKTIT-FIKDNQFQALLQYTDPENAQHTKL 238
Query: 118 ALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+L+ Y+ C L I +S+ L++K +ND+SRDY P P +S PS+
Sbjct: 239 SLDWQNTYNA--CHTLCIDFSKLISLNVKYSNDKSRDYXRPDLPSGDSXPSL 288
>gi|183980004|ref|NP_796275.3| heterogeneous nuclear ribonucleoprotein L [Mus musculus]
gi|197927209|ref|NP_116008.2| heterogeneous nuclear ribonucleoprotein L isoform b [Rattus
norvegicus]
gi|215273994|sp|Q8R081.2|HNRPL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein L;
Short=hnRNP L
gi|71119320|gb|AAH99683.1| Hnrpl protein [Mus musculus]
Length = 586
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 335
>gi|291390016|ref|XP_002711505.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Oryctolagus
cuniculus]
Length = 586
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 335
>gi|149056441|gb|EDM07872.1| rCG53531, isoform CRA_b [Rattus norvegicus]
Length = 456
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 30 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 89
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 90 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 147
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 148 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 205
>gi|441652820|ref|XP_004093177.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L [Nomascus leucogenys]
Length = 590
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 164 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 223
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 224 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 281
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 282 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 339
>gi|300796171|ref|NP_001178959.1| heterogeneous nuclear ribonucleoprotein L [Bos taurus]
gi|410983084|ref|XP_003997873.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Felis catus]
gi|296477716|tpg|DAA19831.1| TPA: heterogeneous nuclear ribonucleoprotein L [Bos taurus]
Length = 588
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 162 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 221
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 222 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 279
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 280 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 337
>gi|52632383|ref|NP_001524.2| heterogeneous nuclear ribonucleoprotein L isoform a [Homo sapiens]
gi|388452706|ref|NP_001252929.1| heterogeneous nuclear ribonucleoprotein L [Macaca mulatta]
gi|114676995|ref|XP_512642.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 6 [Pan
troglodytes]
gi|359318672|ref|XP_003638880.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Canis
lupus familiaris]
gi|402905454|ref|XP_003915534.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Papio anubis]
gi|215274006|sp|P14866.2|HNRPL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L;
Short=hnRNP L
gi|119577232|gb|EAW56828.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_c [Homo
sapiens]
gi|306921585|dbj|BAJ17872.1| heterogeneous nuclear ribonucleoprotein L [synthetic construct]
gi|387542466|gb|AFJ71860.1| heterogeneous nuclear ribonucleoprotein L isoform a [Macaca
mulatta]
gi|410298568|gb|JAA27884.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 589
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
>gi|52632385|ref|NP_001005335.1| heterogeneous nuclear ribonucleoprotein L isoform b [Homo sapiens]
gi|332855272|ref|XP_001167265.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 4 [Pan
troglodytes]
gi|397482177|ref|XP_003812309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Pan paniscus]
gi|403305233|ref|XP_003943172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Saimiri
boliviensis boliviensis]
gi|158257662|dbj|BAF84804.1| unnamed protein product [Homo sapiens]
Length = 456
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 30 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 89
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 90 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQ 147
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 148 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 205
>gi|410978917|ref|XP_003995834.1| PREDICTED: polypyrimidine tract-binding protein 3 [Felis catus]
Length = 540
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 86/175 (49%), Gaps = 28/175 (16%)
Query: 81 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 140
+FS FG V KI F KN QAL+QY D A AK AL+G IY+ C L I +S+ T
Sbjct: 189 IFSKFGTVLKIITFTKNNQFQALLQYADPVNAHYAKMALDGQNIYNAC-CTLRIDFSKLT 247
Query: 141 DLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV------GATANQYNGAQ-FAPPP 193
L++K NND+SRD+T P + QPS+ +P PM G ++ Y GA FAP
Sbjct: 248 SLNVKYNNDKSRDFTRLDLPTGDGQPSL---EP-PMAAAFGAPGIISSPYAGAAGFAPAI 303
Query: 194 PEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHMPGQSGM 248
HQ T AVP A + P ++ +M +PG SG+
Sbjct: 304 G----FHQATGISVPAVPGA------------LGPLTITSSAVTGRMAIPGTSGV 342
>gi|296233743|ref|XP_002807879.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L [Callithrix jacchus]
Length = 589
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
>gi|148692162|gb|EDL24109.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_b [Mus
musculus]
Length = 567
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 141 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 200
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 201 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 258
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 259 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 316
>gi|348563003|ref|XP_003467298.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cavia
porcellus]
Length = 586
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 335
>gi|20072624|gb|AAH27206.1| Heterogeneous nuclear ribonucleoprotein L [Mus musculus]
gi|148692161|gb|EDL24108.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_a [Mus
musculus]
gi|149056440|gb|EDM07871.1| rCG53531, isoform CRA_a [Rattus norvegicus]
Length = 555
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 129 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 188
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 189 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 246
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 247 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 304
>gi|330840158|ref|XP_003292087.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
gi|325077693|gb|EGC31389.1| hypothetical protein DICPUDRAFT_82723 [Dictyostelium purpureum]
Length = 748
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
+LL +I N Y VT++ L+ VFS FG V K+ +F K+G Q+LI+ + AV AK L+
Sbjct: 262 ILLITINNYLYNVTIEELYKVFSNFGTVNKVLLFTKSGNYQSLIEMKTPEEAVKAKNNLD 321
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
G I C L I +S T L IK NN++SRD+T+
Sbjct: 322 GMNI--NNTCSLKIQFSSLTSLKIKYNNEKSRDFTV 355
>gi|11527777|dbj|BAB18649.1| heterogeneous nuclear ribonucleoprotein L [Homo sapiens]
Length = 589
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
>gi|410337383|gb|JAA37638.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 589
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
>gi|197245939|gb|AAI69048.1| Hnrnpl protein [Rattus norvegicus]
Length = 571
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 145 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 204
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 205 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 262
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 263 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 320
>gi|211828181|gb|AAH69184.2| HNRNPL protein [Homo sapiens]
Length = 572
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 146 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 205
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 206 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 263
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 264 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 321
>gi|426388622|ref|XP_004060732.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Gorilla
gorilla gorilla]
Length = 589
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 280
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 338
>gi|32356|emb|CAA34261.1| unnamed protein product [Homo sapiens]
gi|226731|prf||1604358A nuclear RNP protein L
Length = 558
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 132 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 191
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 192 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 249
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 250 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 307
>gi|395859744|ref|XP_003802192.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Otolemur
garnettii]
Length = 557
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 131 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 190
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 191 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 248
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 249 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 306
>gi|426243770|ref|XP_004015721.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Ovis aries]
Length = 598
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 172 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 231
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 232 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 289
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 290 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 347
>gi|343959210|dbj|BAK63460.1| heterogeneous nuclear ribonucleoprotein L [Pan troglodytes]
Length = 558
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 132 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 191
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 192 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 249
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 250 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 307
>gi|189053899|dbj|BAG36406.1| unnamed protein product [Homo sapiens]
Length = 558
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 132 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 191
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 192 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 249
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 250 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 307
>gi|126329101|ref|XP_001362792.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Monodelphis
domestica]
Length = 607
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 181 YIAGHPAFVNYSTSQKISRPGDTDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 240
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 241 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 298
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 299 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 356
>gi|119577230|gb|EAW56826.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_a [Homo
sapiens]
Length = 557
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 131 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 190
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 191 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 248
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 249 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 306
>gi|380799767|gb|AFE71759.1| heterogeneous nuclear ribonucleoprotein L isoform a, partial
[Macaca mulatta]
Length = 467
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 41 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 100
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 101 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQ 158
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 159 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 216
>gi|351706875|gb|EHB09794.1| Polypyrimidine tract-binding protein 1 [Heterocephalus glaber]
Length = 543
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y VTLDVLH +FS FG V KI F KN QAL+QY D +
Sbjct: 174 GMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVS 233
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSR 152
A A+ +L+ IY+ C L I +S+ T L++K N D+SR
Sbjct: 234 AQHARLSLDRQNIYNTC-CTLSIDFSKLTSLNVKYNYDKSR 273
>gi|194215401|ref|XP_001496787.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Equus
caballus]
Length = 509
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 83 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 142
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 143 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFRNDQ 200
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 201 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 258
>gi|432889396|ref|XP_004075256.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oryzias latipes]
Length = 519
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 17/189 (8%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 99 YIAGHPAFINYSTSKKISRPGDSDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQ 158
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 159 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 216
Query: 150 RSRDYTLPST---PMVNS-------QPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMM 199
+ DYT P+ +N+ QP++LG P P G + Y+ + PP E M
Sbjct: 217 DTWDYTNPNLGGPEDMNANPNKRPRQPALLGDHP-PEYGGGYHGYD-ENYGSPPYEGRRM 274
Query: 200 HQPTAAGWG 208
PT G G
Sbjct: 275 -GPTMRGRG 282
>gi|66816231|ref|XP_642125.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60470245|gb|EAL68225.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 530
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
N++L +I N Y +T + +H + S +G V +I +F K GLQ +++ +A AKE+L
Sbjct: 135 NIILCTILNPIYPITTNTIHNIMSPYGRVIRIVIFQKKSGLQTFVEFDSPYSAWAAKESL 194
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
G IY+GG CKL I ++R + L++K N+D++ DYT
Sbjct: 195 NGQDIYNGG-CKLQIEFARVSKLNVKQNDDKTADYT 229
>gi|395522271|ref|XP_003765161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Sarcophilus
harrisii]
Length = 510
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 84 YIAGHPAFVNYSTSQKISRPGDTDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 143
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 144 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 201
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 202 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 259
>gi|158254346|gb|AAI54329.1| Hnrnpl protein [Danio rerio]
Length = 522
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 132 NNVLLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 190
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS--TPMVNSQPSILGQQP 173
L G IY G C L I Y++ T L++ N+ + DYT PS T +N+ P+ +QP
Sbjct: 191 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPSLGTQDMNANPNKRQRQP 246
>gi|67971924|dbj|BAE02304.1| unnamed protein product [Macaca fascicularis]
Length = 456
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 17/178 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 30 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 89
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 90 GIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQ 147
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG +P G + Y+ + PPPP
Sbjct: 148 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDRPAEYGGPHGGYHSHYHDEGYGPPPP 205
>gi|313228979|emb|CBY18131.1| unnamed protein product [Oikopleura dioica]
Length = 409
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 115
+ E N++L +I N Y +T VLH + FG +++I +F K LQA+I++ D++ A+ A
Sbjct: 33 QKEHNIVLLTIRNPFYPITTSVLHKAAARFGDIKRIVIFKKK-FLQAMIEFSDIKMAIQA 91
Query: 116 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS-ILGQQPV 174
K L G IY G C + Y+R L++ N+D + DY++ S V +P +LG +P+
Sbjct: 92 KAGLHGQDIYSGC-CSIKCEYARTEKLNVYKNDDTTWDYSVSSQGQVQKKPCGLLGDRPI 150
Query: 175 PMVGATANQYNGAQFAPPPPEQPM 198
GA N A+ PP+ P
Sbjct: 151 IPNGAPFN----AERESVPPQVPF 170
>gi|325187058|emb|CCA21600.1| polypyrimidine tractbinding protein putative [Albugo laibachii
Nc14]
Length = 614
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 43 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 102
SG + G G P + +L+ ++ ++Y VT+DVL VF FG VQK+ F KN +A
Sbjct: 153 SGNGASGRRGYAGAPNT-ILMVTVTKIEYDVTVDVLQQVFQKFGNVQKVVTFWKNEEFKA 211
Query: 103 LIQYPDVQTAVVAKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
L+Q + A A++AL+G IY G C L I +SRH +L ++ NNDRS DY P P
Sbjct: 212 LVQMESIDQAQAAQQALDGRDIYTG--CNTLGIVFSRHPELRVRFNNDRSWDYMNPGLP 268
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASG 44
G TL I +S H +L V+F + RS DY NP LP PSA D+SG
Sbjct: 236 GCNTLGIVFSRHPELRVRFNNDRSWDYMNPGLPPGPSA-DSSG 277
>gi|428170649|gb|EKX39572.1| hypothetical protein GUITHDRAFT_114298 [Guillardia theta CCMP2712]
Length = 580
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
++ +LL ++ N+ Y V +DV++ VFS G ++KI +F+K G QAL+Q+ A A +
Sbjct: 113 DARILLVTVTNVVYKVDVDVMYQVFSMMGTIEKIVIFNKQGKTQALVQFERPADAQAALD 172
Query: 118 ALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 167
G IY+G C L I +S D+++K NN+RS D+T P+ P N S
Sbjct: 173 RFNGLNIYNG--CNNLQIGFSNLLDITVKYNNERSYDFTNPNLPAGNPNES 221
>gi|410910584|ref|XP_003968770.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Takifugu rubripes]
Length = 514
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 99 YIAGHPAFINYSTSQKISRPGDSDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQ 158
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 159 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 216
Query: 150 RSRDYTLPST---PMVNSQPSILGQQP 173
+ DYT P+ VN+ P+ +QP
Sbjct: 217 ETWDYTNPNLGGPEDVNANPNKRQRQP 243
>gi|242023546|ref|XP_002432193.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
gi|212517590|gb|EEB19455.1| Polypyrimidine tract-binding protein, putative [Pediculus humanus
corporis]
Length = 513
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 8/103 (7%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVAKE 117
+ VL IE+M Y VTLDVL+ V +KI + ++ QALIQYPDV TA AK
Sbjct: 136 NTVLRVIIEHMVYPVTLDVLYKV------RRKILLTRQSFRSFQALIQYPDVITAQAAKL 189
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
+L+G IY+ C L I YS+ + L++K NND+SRDYT P+ P
Sbjct: 190 SLDGRNIYNSC-CTLRIEYSKLSALNVKYNNDKSRDYTNPNLP 231
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
CTLRI YS + L+VK+ + +SRDYTNP LP
Sbjct: 201 CTLRIEYSKLSALNVKYNNDKSRDYTNPNLP 231
>gi|443732513|gb|ELU17197.1| hypothetical protein CAPTEDRAFT_161728, partial [Capitella teleta]
Length = 546
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G E + VLL +I N +Y +T+DV+H + S GPV +I +F KN GLQ ++++ ++
Sbjct: 120 GNHEETPNKVLLFTIFNPKYPITVDVMHTIASNNGPVARIVIFRKN-GLQCMVEFETLEG 178
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPM--VNSQPSIL 169
A AK AL G IY G C L I Y++ T L++ N+ DYT PS P NS+ + L
Sbjct: 179 AQRAKSALNGADIY-SGCCTLKIEYAKPTRLNVSRNDSEMWDYTTPSGPKSDFNSKSAPL 237
Query: 170 GQQP 173
+P
Sbjct: 238 LAEP 241
>gi|116004021|ref|NP_001070368.1| heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|115305250|gb|AAI23452.1| Heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
gi|296482596|tpg|DAA24711.1| TPA: heterogeneous nuclear ribonucleoprotein L-like [Bos taurus]
Length = 541
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 223
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
>gi|334313145|ref|XP_001365024.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Monodelphis
domestica]
Length = 538
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 162 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 220
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 221 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 276
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 277 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 329
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 330 GSVVMVSGLHQLKM 343
>gi|20149709|ref|NP_612403.2| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Homo
sapiens]
gi|62286941|sp|Q8WVV9.1|HNRLL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like;
Short=hnRNPLL; AltName: Full=Stromal RNA-regulating
factor
gi|17028350|gb|AAH17480.1| Heterogeneous nuclear ribonucleoprotein L-like [Homo sapiens]
gi|62988915|gb|AAY24302.1| unknown [Homo sapiens]
gi|158256360|dbj|BAF84151.1| unnamed protein product [Homo sapiens]
gi|380784945|gb|AFE64348.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|383409735|gb|AFH28081.1| heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Macaca
mulatta]
gi|410214350|gb|JAA04394.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410253266|gb|JAA14600.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289230|gb|JAA23215.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410329931|gb|JAA33912.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 542
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
>gi|359321615|ref|XP_003639639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Canis
lupus familiaris]
Length = 545
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 169 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 227
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 228 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 283
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 284 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 336
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 337 GSVVMVSGLHQLKM 350
>gi|41055393|ref|NP_957393.1| heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|28278846|gb|AAH45336.1| Zgc:55429 [Danio rerio]
gi|182890552|gb|AAI64693.1| Zgc:55429 protein [Danio rerio]
Length = 536
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 4/129 (3%)
Query: 32 YLPVAPSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ PS I+ S ++S D +NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGRPSYINYSTSQKISRPTDSDDTRSVNNVLLLTIMNPIYPITSDVLYTICNNCGPVQ 161
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 219
Query: 150 RSRDYTLPS 158
+ DYT P+
Sbjct: 220 DTWDYTNPN 228
>gi|390474560|ref|XP_002757889.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Callithrix jacchus]
Length = 543
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 225
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 226 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 281
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 282 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 334
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 335 GSVVMVSGLHQLKM 348
>gi|158257950|dbj|BAF84948.1| unnamed protein product [Homo sapiens]
Length = 537
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
>gi|217416379|ref|NP_001136122.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo
sapiens]
gi|25988649|gb|AAN76189.1| BLOCK24 variant [Homo sapiens]
gi|67005958|gb|AAQ20084.2| stromal RNA regulating factor [Homo sapiens]
gi|383409737|gb|AFH28082.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|384950354|gb|AFI38782.1| heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Macaca
mulatta]
gi|410214348|gb|JAA04393.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
gi|410289228|gb|JAA23214.1| heterogeneous nuclear ribonucleoprotein L-like [Pan troglodytes]
Length = 537
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
>gi|395846042|ref|XP_003795724.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Otolemur
garnettii]
Length = 536
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 160 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 218
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 219 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 274
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 275 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 327
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 328 GSVVMVSGLHQLKM 341
>gi|348524681|ref|XP_003449851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oreochromis niloticus]
Length = 529
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 27/188 (14%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 102 YIAGHPAFINYSTSQKISRPGDSDDTRSVNNVLLLTIINPIYPITTDVLYTICNNCGPVQ 161
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ L++ N+
Sbjct: 162 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPARLNVFKNDQ 219
Query: 150 RSRDYTLPS----------------TPMVN-----SQPSILGQQPVPMVG--ATANQYNG 186
+ DYT P+ P N QP++LG P G + YN
Sbjct: 220 DTWDYTNPNLSGQDADGEGNWNNSQDPNANPNKRQRQPALLGDHPPDYGGPQGGYHGYND 279
Query: 187 AQFAPPPP 194
+ PPPP
Sbjct: 280 DSYGPPPP 287
>gi|355694958|gb|AER99845.1| heteroproteinous nuclear ribonucleoprotein L-like protein [Mustela
putorius furo]
Length = 380
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 5 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 63
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 64 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 119
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 120 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 172
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 173 GSVVMVSGLHQLKM 186
>gi|66809907|ref|XP_638677.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60467316|gb|EAL65349.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 892
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
+LL +I N Y +T+D L VFS +G + KI +F K+G Q+LI+ + A AK L+
Sbjct: 400 ILLVTISNYFYNITIDELFKVFSHYGTILKILLFTKSGNYQSLIEMKTPEEATKAKNVLD 459
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
G I + C L I YS T L IK NN++SRD+T+
Sbjct: 460 GVNINNS--CSLKIQYSSLTSLKIKYNNEKSRDFTV 493
>gi|335775957|gb|AEH58745.1| heterogeneous nuclear ribonucleoprotein L-lik-like protein [Equus
caballus]
Length = 424
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 48 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 106
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 107 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 162
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 163 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 215
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 216 GSVVMVSGLHQLKM 229
>gi|224046933|ref|XP_002199365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Taeniopygia guttata]
Length = 546
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 170 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAA 228
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 229 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 284
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 285 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 337
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 338 GSVVMVSGLHQLKM 351
>gi|395508191|ref|XP_003758397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Sarcophilus harrisii]
Length = 500
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 124 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 182
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 183 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 238
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 239 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 291
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 292 GSVVMVSGLHQLKM 305
>gi|344288860|ref|XP_003416164.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Loxodonta
africana]
Length = 489
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 113 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 171
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 172 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 227
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 228 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 280
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 281 GSVVMVSGLHQLKM 294
>gi|67972328|dbj|BAE02506.1| unnamed protein product [Macaca fascicularis]
Length = 437
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 119
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 175
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 176 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 228
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 229 GSVVMVSGLHQLKM 242
>gi|363731463|ref|XP_414998.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gallus
gallus]
Length = 514
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 138 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAA 196
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 197 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 252
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 253 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 305
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 306 GSVVMVSGLHQLKM 319
>gi|395745998|ref|XP_003778369.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein 1-like [Pongo abelii]
Length = 551
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDA--SGQLSV-----GLD-GKKLEPES 59
I +S H L +++RD A A+++ SG L++ +D G + +S
Sbjct: 128 IQFSNHKGLKTDSSPNQARDLA------AXQAVNSVQSGNLALTAPAAAVDAGMAMAGQS 181
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
VL +EN+ Y +TLDVLH +FS FG V I F K+ QAL+QY D + A AK +L
Sbjct: 182 PVLRIIVENLFYPMTLDVLHQIFSKFGKVNTIT-FIKDNQFQALLQYADPENAQHAKLSL 240
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+ Y+ L I +S+ T L+++ ND+S DY P P +SQPS+
Sbjct: 241 DWQNTYNACIT-LCIDFSKLTSLNVRY-NDKSSDYXRPDLPSRDSQPSL 287
>gi|154147563|ref|NP_001093751.1| heterogeneous nuclear ribonucleoprotein L [Xenopus (Silurana)
tropicalis]
gi|140832702|gb|AAI35425.1| hnrpl protein [Xenopus (Silurana) tropicalis]
Length = 538
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 15/149 (10%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+NVLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ +Q+A AK +
Sbjct: 142 NNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSMQSAQRAKAS 200
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP----------MVNSQPSI 168
L G IY G C L I Y++ + L++ N+ + DYT P+ P +
Sbjct: 201 LNGADIYS-GCCTLKIEYAKPSRLNVFKNDQDTWDYTNPALSGQGDAAGNPNKRQRNPPL 259
Query: 169 LGQQPVPMVGATA---NQYNGAQFAPPPP 194
LG P G A Y+ + PPPP
Sbjct: 260 LGDHPAEYGGPHAGYHGHYHEEAYGPPPP 288
>gi|427796049|gb|JAA63476.1| Putative heteroproteinous nuclear ribonucleoprotein l, partial
[Rhipicephalus pulchellus]
Length = 523
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLL +I N Y +T+DV+H + + G V +I +F KNG +QA++++ V+ AV AK++L
Sbjct: 117 VLLMTILNPAYPITVDVIHTICTPSGKVMRIVIFKKNG-VQAMVEFDGVEAAVRAKKSLN 175
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ-PSILGQ 171
G IY G C L I Y++ T L++ N++ S DYT P+ S+ P++LG+
Sbjct: 176 GADIYSG-CCTLKIEYAKPTRLNVYKNDNDSWDYTNPNLGKSGSERPALLGE 226
>gi|432889398|ref|XP_004075257.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oryzias latipes]
Length = 526
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 28/200 (14%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 99 YIAGHPAFINYSTSKKISRPGDSDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQ 158
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 159 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 216
Query: 150 RSRDYTLP--------------STPMVNS-------QPSILGQQPVPMVGATANQYNGAQ 188
+ DYT P S +N+ QP++LG P P G + Y+
Sbjct: 217 DTWDYTNPNLGGPDGDADGNGSSAEDMNANPNKRPRQPALLGDHP-PEYGGGYHGYD-EN 274
Query: 189 FAPPPPEQPMMHQPTAAGWG 208
+ PP E M PT G G
Sbjct: 275 YGSPPYEGRRM-GPTMRGRG 293
>gi|387018124|gb|AFJ51180.1| Heterogeneous nuclear ribonucleoprotein L-like [Crotalus
adamanteus]
Length = 539
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 163 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 221
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 222 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 277
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA-------VPPASQSMPMMGNHPYMPPGSM 231
+ + + P P+ + A +P AS S GN P GS+
Sbjct: 278 EHPSSFRHDGYGSHGPLLPLPSRYRMASRDTPELVAYPLPQASSSYMHGGN----PSGSV 333
Query: 232 PMGPGMMQMHM 242
M G+ Q M
Sbjct: 334 VMVSGLHQQKM 344
>gi|297307105|ref|NP_001167465.1| heterogeneous nuclear ribonucleoprotein L [Xenopus laevis]
gi|50416457|gb|AAH77493.1| Unknown (protein for MGC:82601) [Xenopus laevis]
Length = 538
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 15/149 (10%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+NVLL +I N Y++T DVL+ + + GPV++I +F KN G+QA++++ VQ+A AK +
Sbjct: 142 NNVLLLTILNPIYSITTDVLYTICNPCGPVERIVIFRKN-GVQAMVEFDSVQSAQRAKAS 200
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP----------MVNSQPSI 168
L G IY G C L I Y++ + L++ N+ + DYT P P +
Sbjct: 201 LNGADIY-SGCCTLKIEYAKPSRLNVFKNDQDTWDYTNPGLSGQGDAAGNPNKRQRNPPL 259
Query: 169 LGQQPVPMVGATA---NQYNGAQFAPPPP 194
LG P G A Y+ + PPPP
Sbjct: 260 LGDHPAEYGGPHAGYHGHYHEEAYGPPPP 288
>gi|47224789|emb|CAG06359.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 84/150 (56%), Gaps = 10/150 (6%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 99 YIAGHPAFINYSTSQKISRPGDSDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQ 158
Query: 90 KIAMFDKNGGLQALIQYP---DVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKV 146
+I +F KN G+QA+++YP VQ+A AK +L G IY G C L I Y++ T L++
Sbjct: 159 RIVIFRKN-GVQAMVEYPFIDSVQSAQRAKASLNGADIYSGC-CTLKIEYAKPTRLNVFK 216
Query: 147 NNDRSRDYTLPST---PMVNSQPSILGQQP 173
N+ + DYT P+ VN+ P+ +QP
Sbjct: 217 NDQETWDYTNPNLGGPEDVNANPNKRQRQP 246
>gi|326915072|ref|XP_003203845.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Meleagris gallopavo]
Length = 489
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 113 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVFCAQKAKAA 171
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 172 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 227
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P G+ +P AS S GN P
Sbjct: 228 EHPSSFRHDGYGSHGPLLPL---PNRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 280
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 281 GSVVMVSGLHQLKM 294
>gi|281350475|gb|EFB26059.1| hypothetical protein PANDA_013339 [Ailuropoda melanoleuca]
Length = 368
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 169 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 227
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 228 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 283
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 284 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 336
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 337 GSVVMVSGLHQLKM 350
>gi|392339204|ref|XP_003753752.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Rattus norvegicus]
Length = 609
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 32 YLPVAPSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S ++S D + + ++VLL +I N Y++T DVL+ + + GP+Q
Sbjct: 185 YIAGHPAFINYCTSQKISRPGDSEDSQSINSVLLFTILNPIYSITTDVLYTICNPCGPIQ 244
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+ +F +N G+QA++++ VQ+A AK +L+G IY G C L I Y++ T L++ NN
Sbjct: 245 RTVIFREN-GVQAMVEFDSVQSAQSAKASLDGADIY-SGCCTLTIEYAKPTRLNVSKNNQ 302
Query: 150 RSRDYTLPSTP----------MVNSQPSILGQQPVPMV---GATANQYNGAQFAPPP 193
+ DYT P QP +LG P G + Y+ + PPP
Sbjct: 303 DTWDYTNPXLSGQGDPGSNHNECQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYXPPP 359
>gi|330789887|ref|XP_003283030.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
gi|325087102|gb|EGC40483.1| hypothetical protein DICPUDRAFT_85687 [Dictyostelium purpureum]
Length = 488
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
N++L +I N Y +T + LH + S +G V +I +F K GLQA +++ +A AKE L
Sbjct: 135 NIILCTILNPFYPITTNTLHTIMSPYGRVLRIVIFQKKSGLQAFVEFDSPYSANTAKETL 194
Query: 120 EGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
G+ IY CKL I ++R + L++K N++++ DYT P
Sbjct: 195 NGYNIYTEC-CKLQIEFARVSKLNVKQNDEKTADYTTP 231
>gi|397493589|ref|XP_003817686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pan paniscus]
Length = 539
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 163 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 221
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 222 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 277
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 278 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 330
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 331 GSVVMVSGLHQLKM 344
>gi|109102685|ref|XP_001109971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Macaca mulatta]
Length = 537
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 219
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
>gi|335308902|ref|XP_003361415.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Sus
scrofa]
Length = 552
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 177 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 235
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 236 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 291
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 292 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 344
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 345 GSVVMVSGLHQLKM 358
>gi|440907649|gb|ELR57769.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Bos
grunniens mutus]
Length = 541
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 223
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
>gi|392346115|ref|XP_003749467.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like, partial [Rattus norvegicus]
Length = 582
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 32 YLPVAPSAID--ASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S ++S D + + ++VLL +I N Y++T DVL+ + + GP+Q
Sbjct: 158 YIAGHPAFINYCTSQKISRPGDSEDSQSINSVLLFTILNPIYSITTDVLYTICNPCGPIQ 217
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+ +F +N G+QA++++ VQ+A AK +L+G IY G C L I Y++ T L++ NN
Sbjct: 218 RTVIFREN-GVQAMVEFDSVQSAQSAKASLDGADIY-SGCCTLTIEYAKPTRLNVSKNNQ 275
Query: 150 RSRDYTLPSTP----------MVNSQPSILGQQPVPMV---GATANQYNGAQFAPPP 193
+ DYT P QP +LG P G + Y+ + PPP
Sbjct: 276 DTWDYTNPXLSGQGDPGSNHNECQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYXPPP 332
>gi|109102683|ref|XP_001109932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Macaca mulatta]
Length = 542
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
>gi|338714336|ref|XP_001918049.2| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Equus caballus]
Length = 543
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLTFESVLCAQKAKAA 225
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 226 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 281
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 282 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 334
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 335 GSVVMVSGLHQLKM 348
>gi|291386911|ref|XP_002709958.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oryctolagus cuniculus]
Length = 541
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 223
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
>gi|119620776|gb|EAX00371.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
gi|119620777|gb|EAX00372.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_d [Homo
sapiens]
Length = 542
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
>gi|410035016|ref|XP_001168474.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 4
[Pan troglodytes]
gi|426335280|ref|XP_004029156.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Gorilla
gorilla gorilla]
gi|119620773|gb|EAX00368.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_a [Homo
sapiens]
Length = 537
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 219
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 275
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 276 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 328
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 329 GSVVMVSGLHQLKM 342
>gi|410955434|ref|XP_003984358.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Felis catus]
Length = 544
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 168 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 226
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 227 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 282
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 283 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 335
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 336 GSVVMVSGLHQLKM 349
>gi|332227246|ref|XP_003262804.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein L-like [Nomascus leucogenys]
Length = 542
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
>gi|327262697|ref|XP_003216160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Anolis
carolinensis]
Length = 551
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 175 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 233
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSILGQQP 173
L G IY G C L I Y+R T L++ N++ S DYT P + + +ILG+ P
Sbjct: 234 LNGADIY-AGCCTLKIEYARPTRLNVTQNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHP 292
>gi|355565619|gb|EHH22048.1| hypothetical protein EGK_05237 [Macaca mulatta]
Length = 542
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 224
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 280
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 281 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 333
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 334 GSVVMVSGLHQLKM 347
>gi|291386909|ref|XP_002709957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oryctolagus cuniculus]
Length = 547
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 171 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 229
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 230 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 285
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 286 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 338
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 339 GSVVMVSGLHQLKM 352
>gi|119577231|gb|EAW56827.1| heterogeneous nuclear ribonucleoprotein L, isoform CRA_b [Homo
sapiens]
Length = 590
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 163 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 222
Query: 90 KIAMFDKNGGLQALIQYPDVQ-TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 148
+I +F KN G+QA+++YP ++ +A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 223 RIVIFRKN-GVQAMVEYPLLENSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKND 280
Query: 149 DRSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 281 QDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 339
>gi|74147193|dbj|BAE27500.1| unnamed protein product [Mus musculus]
Length = 670
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 294 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 352
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 353 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 390
>gi|348574608|ref|XP_003473082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Cavia
porcellus]
Length = 541
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+ + V A AK A
Sbjct: 165 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAA 223
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 224 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 279
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 280 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 332
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 333 GSVVMVSGLHQLKM 346
>gi|402890606|ref|XP_003908574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Papio anubis]
gi|119620774|gb|EAX00369.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_b [Homo
sapiens]
Length = 437
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 119
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 175
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 176 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 228
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 229 GSVVMVSGLHQLKM 242
>gi|12849891|dbj|BAB28521.1| unnamed protein product [Mus musculus]
Length = 588
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 212 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 270
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 271 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 326
Query: 179 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPM 233
+ + + P P + M A P S M H P GS+ M
Sbjct: 327 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYM--HGGSPSGSVVM 384
Query: 234 GPGMMQMHM 242
G+ Q+ M
Sbjct: 385 VSGLHQLKM 393
>gi|343961675|dbj|BAK62427.1| heterogeneous nuclear ribonucleoprotein L-like protein [Pan
troglodytes]
Length = 513
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 28/185 (15%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P S +L P+P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRGSHGPLL---PLP--- 272
Query: 179 ATANQYN-GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 237
++Y G++ P P+ P AS S GN P GS+ M G+
Sbjct: 273 ---SRYRMGSRDTPELVAYPL------------PQASSSYMHGGN----PSGSVVMVSGL 313
Query: 238 MQMHM 242
Q+ M
Sbjct: 314 HQLKM 318
>gi|355755804|gb|EHH59551.1| hypothetical protein EGM_09690, partial [Macaca fascicularis]
Length = 501
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 18/179 (10%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 74 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 133
Query: 90 KIAMFDKNGGLQALIQYPDVQ-TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 148
+I +F KN G+QA+++YP ++ +A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 134 RIVIFRKN-GVQAMVEYPLLENSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKND 191
Query: 149 DRSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 192 QDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 250
>gi|197927211|ref|NP_001128232.1| heterogeneous nuclear ribonucleoprotein L isoform a [Rattus
norvegicus]
Length = 623
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 220 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 277
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPV 174
+ DYT P+ P N QP +LG P
Sbjct: 278 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPA 312
>gi|74194841|dbj|BAE26011.1| unnamed protein product [Mus musculus]
Length = 592
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 129 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 188
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 189 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 246
Query: 150 RSRDYTLPS-----TPMVN-----SQPSILGQQPV 174
+ DYT P+ P N QP +LG P
Sbjct: 247 DTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPA 281
>gi|195584911|ref|XP_002082247.1| GD25314 [Drosophila simulans]
gi|194194256|gb|EDX07832.1| GD25314 [Drosophila simulans]
Length = 388
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 19/165 (11%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + GPV +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGPVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 165
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + S
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKSLFSI 185
Query: 166 PS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 207
P +L QP P++G GA F PP P H T W
Sbjct: 186 PENVVMLESQP-PLLGP------GAAF--PPFGAPEYHTTTPENW 221
>gi|432889400|ref|XP_004075258.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Oryzias latipes]
Length = 490
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ I+ S + G + S NVLL +I N Y +T DVL+ + + GPVQ
Sbjct: 99 YIAGHPAFINYSTSKKISRPGDSDDSRSVNNVLLFTIMNPIYPITTDVLYTICNNCGPVQ 158
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+I +F KN G+QA++++ VQ+A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 159 RIVIFRKN-GVQAMVEFDSVQSAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQ 216
Query: 150 RSRDYTLPS 158
+ DYT P+
Sbjct: 217 DTWDYTNPN 225
>gi|221126625|ref|XP_002156158.1| PREDICTED: polypyrimidine tract-binding protein 3-like [Hydra
magnipapillata]
Length = 494
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL + N+ Y VT+DVL VF G +QK+ F +N ALIQY + + A AK +
Sbjct: 135 VLKVIVTNIIYPVTIDVLQQVFQRCGEIQKVVTFIRNDQFHALIQYSNSKEASAAKVLFD 194
Query: 121 GHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLP 157
IY+G C LH+ +S+ ++L +K NN++ RD+T P
Sbjct: 195 KQNIYNG--CNTLHVEFSKMSELVVKFNNEKMRDFTKP 230
>gi|417401975|gb|JAA47851.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 502
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 262
>gi|47087069|ref|NP_998548.1| heterogeneous nuclear ribonucleoprotein L2 [Danio rerio]
gi|32451940|gb|AAH54655.1| Heterogeneous nuclear ribonucleoprotein L [Danio rerio]
gi|182891832|gb|AAI65353.1| Hnrnpl protein [Danio rerio]
Length = 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 132 NNVLLLTIMNPIYPITSDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 190
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY G C L I Y++ T L++ N+ + DYT PS
Sbjct: 191 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPS 229
>gi|417402541|gb|JAA48116.1| Putative hnrnp-l/ptb/hephaestus splicing factor family [Desmodus
rotundus]
Length = 542
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSILGQQP 173
L G IY G C L I Y+R T L++ N++ S DYT P + + +ILG+ P
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHP 283
>gi|351715514|gb|EHB18433.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Heterocephalus glaber]
Length = 479
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+ + V A AK A
Sbjct: 103 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMFMFESVLCAQKAKAA 161
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 162 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 217
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 218 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 270
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 271 GSVVMVSGLHQLKM 284
>gi|293347913|ref|XP_001063027.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
gi|293359746|ref|XP_233805.5| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Rattus
norvegicus]
Length = 591
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 273
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 311
>gi|348538507|ref|XP_003456732.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Oreochromis
niloticus]
Length = 556
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ VQ A AK A
Sbjct: 177 NKVLLLSIQNPLYPITTDVLYTVCNPIGSVLRIVIFKRN-GIQAMVEFESVQCAQKAKAA 235
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 236 LNGADIY-AGCCTLKIEYARPTRLNVIKNDNESWDYTKP 273
>gi|302821012|ref|XP_002992171.1| hypothetical protein SELMODRAFT_44533 [Selaginella moellendorffii]
gi|300140097|gb|EFJ06826.1| hypothetical protein SELMODRAFT_44533 [Selaginella moellendorffii]
Length = 414
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 114
E S +LL ++ + VT+D LH F +FGP++KIA+F ++ L QALIQY + A
Sbjct: 88 ETCSAILLVTMLDSVCHVTVDALHQTFKSFGPIEKIAIFPQSTVLAQALIQYASPRDARE 147
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
AK L I +G C + I YSR ++ + NND SRD+T S P PSILG
Sbjct: 148 AKHRLHKSKILNGS-CTMEIQYSRTDEVRVACNNDLSRDFTNSSLPSARF-PSILG 201
>gi|426226432|ref|XP_004007347.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Ovis
aries]
Length = 507
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 22/194 (11%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 131 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 189
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 190 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 245
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 246 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 298
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 299 GSVVMVSGLHQLKM 312
>gi|386768309|ref|NP_001246425.1| smooth, isoform L [Drosophila melanogaster]
gi|383302597|gb|AFH08178.1| smooth, isoform L [Drosophila melanogaster]
Length = 492
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 18/165 (10%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 165
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVKEIGNG 185
Query: 166 PSILGQQPV---PMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 207
S L Q+P+ P++G GA F PP P H T W
Sbjct: 186 RSPLLQEPLYEPPLLGP------GAAF--PPFGAPEYHTTTPENW 222
>gi|37514843|gb|AAH12849.2| Hnrpll protein [Mus musculus]
Length = 594
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 218 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 276
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 277 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 332
Query: 179 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 232
+ + + P P + M A P P + S M G P GS+
Sbjct: 333 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 389
Query: 233 MGPGMMQMHM 242
M G+ Q+ M
Sbjct: 390 MVSGLHQLKM 399
>gi|302790736|ref|XP_002977135.1| hypothetical protein SELMODRAFT_443468 [Selaginella moellendorffii]
gi|300155111|gb|EFJ21744.1| hypothetical protein SELMODRAFT_443468 [Selaginella moellendorffii]
Length = 466
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
P S VL ++ N Y + + VLH VFS G V+KI + + G+ IQ+ V+TA K
Sbjct: 126 PSSKVLAVTVTNPIYPIDVYVLHRVFSPHGSVEKITI-SRKLGICGYIQFDSVKTAAHVK 184
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP-MVNSQPSILGQQPVP 175
+ L I+DG CK+ I Y++ +L + N+D +RD+ S P V S PSILG PV
Sbjct: 185 DLLNDRHIFDGC-CKMEIQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVE 243
Query: 176 MV 177
V
Sbjct: 244 SV 245
>gi|110347535|ref|NP_659051.3| heterogeneous nuclear ribonucleoprotein L-like [Mus musculus]
gi|62286942|sp|Q921F4.3|HNRLL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like
Length = 591
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 273
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 329
Query: 179 ATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPYMPPGSMP 232
+ + + P P + M A P P + S M G P GS+
Sbjct: 330 DHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS---PSGSVV 386
Query: 233 MGPGMMQMHM 242
M G+ Q+ M
Sbjct: 387 MVSGLHQLKM 396
>gi|253723235|pdb|2E5I|A Chain A, Solution Structure Of Rna Binding Domain 2 In
Heterogeneous Nuclear Ribonucleoprotein L-Like
Length = 124
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 23 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 81
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 82 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 119
>gi|348522987|ref|XP_003449005.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Oreochromis niloticus]
Length = 527
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 128 NNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 186
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 187 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 225
>gi|26330256|dbj|BAC28858.1| unnamed protein product [Mus musculus]
Length = 326
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 273
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 274 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 311
>gi|345311818|ref|XP_003429156.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L
[Ornithorhynchus anatinus]
Length = 693
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 106 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 164
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 165 LNGADIYS-GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 203
>gi|348522989|ref|XP_003449006.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Oreochromis niloticus]
Length = 492
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+NVLL +I N Y +T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 128 NNVLLFTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 186
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 187 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 225
>gi|213510846|ref|NP_001133491.1| Heterogeneous nuclear ribonucleoprotein L-like [Salmo salar]
gi|209154218|gb|ACI33341.1| Heterogeneous nuclear ribonucleoprotein L-like [Salmo salar]
Length = 548
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ ++ A AK A
Sbjct: 171 NKVLLLSIQNPLYPITTDVLYTVCNPIGSVMRIVIFKRN-GIQAMVEFESIECAQKAKAA 229
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + G+Q ++G
Sbjct: 230 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNESWDYTKPYLVRRDVSERGKGRQRQAILG 288
Query: 179 ATANQYNGAQFAPPPPEQPM 198
+ Y + P P+
Sbjct: 289 EHPSSYGDNGYGSHCPLLPL 308
>gi|25988650|gb|AAN76190.1| BLOCK24 variant [Homo sapiens]
Length = 262
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 257
>gi|417398360|gb|JAA46213.1| Putative heteroproteinous nuclear ribonucleoprotein l [Desmodus
rotundus]
Length = 285
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 224
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 225 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 262
>gi|449274548|gb|EMC83649.1| Heterogeneous nuclear ribonucleoprotein L-like protein, partial
[Columba livia]
Length = 471
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+++YP A AK A
Sbjct: 97 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEYP--FCAQKAKAA 153
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P + + G+Q ++G
Sbjct: 154 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILG 209
Query: 179 ATANQYNGAQFAPPPPEQPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPP 228
+ + + P P+ P+ G+ +P AS S GN P
Sbjct: 210 EHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PS 262
Query: 229 GSMPMGPGMMQMHM 242
GS+ M G+ Q+ M
Sbjct: 263 GSVVMVSGLHQLKM 276
>gi|221058202|ref|XP_002261609.1| polypyrimidine tract binding protein [Plasmodium knowlesi strain H]
gi|194247614|emb|CAQ41014.1| polypyrimidine tract binding protein, putative [Plasmodium knowlesi
strain H]
Length = 663
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 37 PSAIDA--SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF 94
PS DA G + G K S V+L S+ N+ Y V +D+++ +FS GPV+KI F
Sbjct: 294 PSTKDALEGGNIKKGKHNK--NESSRVILVSVLNLHYPVDIDLIYYLFSKCGPVEKIIAF 351
Query: 95 DKNGGL-QALIQYPDVQTAVVAKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSR 152
+N + QAL+Q+ +++TA A + L IYDG C + I YS +L++K NN SR
Sbjct: 352 SRNPLIYQALVQFQNIETAQEAIKTLHNRNIYDG--CNTIQIQYSFLKELNVKANNSSSR 409
Query: 153 DYTLPSTPMVNS 164
DYT N+
Sbjct: 410 DYTTTDVSKNNN 421
>gi|340375987|ref|XP_003386515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Amphimedon queenslandica]
Length = 449
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
PE+++LL +I N Y +T+DV+ + + +G VQ+I +F KN GLQ L+++ +A AK
Sbjct: 145 PENHILLFTIFNPLYPITVDVIRTICTPYGFVQRIVIFRKN-GLQVLVEFDSNHSAQRAK 203
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPM 176
+ L+G IY G C L I ++R L++ N+D + DYT+ + ++ P + P+
Sbjct: 204 QQLDGADIY-AGCCTLKIEFARTNKLNVFKNDDMTCDYTVQGQRLQSNFPRV---PPMQQ 259
Query: 177 VGATANQYNGAQFAPPPPEQ-PMMHQPTAAGWGAV 210
++ + +AP P P + AG G+V
Sbjct: 260 QQQQMRPFSTSPYAPQPTNSAPFVGTQAVAGSGSV 294
>gi|302791034|ref|XP_002977284.1| hypothetical protein SELMODRAFT_54589 [Selaginella moellendorffii]
gi|300155260|gb|EFJ21893.1| hypothetical protein SELMODRAFT_54589 [Selaginella moellendorffii]
Length = 414
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 114
E S +LL ++ + VT+D LH F +FGP++KIA+F ++ L QALIQY + A
Sbjct: 88 ETCSPILLVTMLDSVCHVTVDALHQTFKSFGPIEKIAIFPQSTVLAQALIQYASPRDARE 147
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG 170
AK L I +G C + I YSR ++ + NND SRD+T S P PSILG
Sbjct: 148 AKHRLHKSKILNGS-CTMEIQYSRTDEVRVACNNDLSRDFTNSSLPSARF-PSILG 201
>gi|340708741|ref|XP_003392980.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Bombus
terrestris]
Length = 479
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA++++ V++A AKE L
Sbjct: 45 VLLFTIINPVYPITVEVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKETLH 103
Query: 121 GHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 104 GADIYS-GCCTLKIDFAKPTKLNVYKNDAESWDYTTPT 140
>gi|52545658|emb|CAH56358.1| hypothetical protein [Homo sapiens]
Length = 216
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 100 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 158
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 159 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 196
>gi|31416927|gb|AAH08217.2| HNRPLL protein [Homo sapiens]
Length = 275
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 219
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 257
>gi|74222755|dbj|BAE42243.1| unnamed protein product [Mus musculus]
Length = 172
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++++ V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEFESVLCAQKAKAA 119
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 157
>gi|350413134|ref|XP_003489890.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Bombus
impatiens]
Length = 479
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA++++ V++A AKE
Sbjct: 43 NHVLLFTIINPVYPITVEVLHAISAPSGQVQRIVIFKKN-GVQAMVEFDTVESATRAKET 101
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 102 LHGADIYS-GCCTLKIDFAKPTKLNVYKNDAESWDYTTPT 140
>gi|410035018|ref|XP_003949838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Pan
troglodytes]
Length = 513
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 93/185 (50%), Gaps = 28/185 (15%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 161 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 219
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P S +L P+P
Sbjct: 220 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRGSHGPLL---PLP--- 272
Query: 179 ATANQYN-GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 237
++Y G++ P P+ P AS S GN P GS+ M G+
Sbjct: 273 ---SRYRMGSRDTPELVAYPL------------PQASSSYMHGGN----PSGSVVMVSGL 313
Query: 238 MQMHM 242
Q+ M
Sbjct: 314 HQLKM 318
>gi|328875343|gb|EGG23708.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 404
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
SN+LL SI + ++ L+ + S +G V +I +F K G LQA +++ +A VAKEA
Sbjct: 49 SNILLCSILTPIFPISTSTLYTIMSPYGRVLRIVIFQKKG-LQAFVEFESPYSAWVAKEA 107
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
L G IY G C L I Y+R L++K N+D++ DYT
Sbjct: 108 LNGQDIYTGS-CTLQIDYARVATLNVKQNDDKTYDYT 143
>gi|4929470|gb|AAD34009.1|AF148690_1 RNA-binding protein XlhnRNPL [Xenopus laevis]
Length = 273
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 79/133 (59%), Gaps = 10/133 (7%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+NVLL +I N Y++T DVL+ + + GPV++I +F KN G+QA++++ VQ+A AK +
Sbjct: 142 NNVLLLTILNPIYSITTDVLYTICNPCGPVERIVIFRKN-GVQAMVEFDSVQSAQRAKAS 200
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILG-----QQP 173
L G IY G C L I Y++ + L++ N+ + DYT P ++ Q + G Q+
Sbjct: 201 LNGADIY-SGCCTLKIEYAKPSRLNVFKNDQDTWDYT---NPCLSGQGDLGGNPNKRQRN 256
Query: 174 VPMVGATANQYNG 186
P++G +Y G
Sbjct: 257 PPLLGDHPAEYGG 269
>gi|440910313|gb|ELR60121.1| Heterogeneous nuclear ribonucleoprotein L, partial [Bos grunniens
mutus]
Length = 512
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 18/179 (10%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 85 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 144
Query: 90 KIAMFDKNGGLQALIQYPDV-QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN 148
+I +F KN G+QA+++YP + A AK +L G IY G C L I Y++ T L++ N+
Sbjct: 145 RIVIFRKN-GVQAMVEYPLLGNGAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKND 202
Query: 149 DRSRDYTLPS-----TPMVN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
+ DYT P+ P N QP +LG P G + Y+ + PPPP
Sbjct: 203 QDTWDYTNPNLSGQGDPGSNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 261
>gi|402890610|ref|XP_003908576.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 3
[Papio anubis]
Length = 413
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 93/185 (50%), Gaps = 28/185 (15%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 119
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DYT P S +L P+P
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRGSHGPLL---PLP--- 172
Query: 179 ATANQYN-GAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGPGM 237
++Y G++ P P+ P AS S GN P GS+ M G+
Sbjct: 173 ---SRYRMGSRDTPELVAYPL------------PQASSSYMHGGN----PSGSVVMVSGL 213
Query: 238 MQMHM 242
Q+ M
Sbjct: 214 HQLKM 218
>gi|390341476|ref|XP_785931.3| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Strongylocentrotus purpuratus]
Length = 570
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 37 PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 96
P+ D S + G+ +NVLL ++ +Y +T DV+H + FG V +I +F K
Sbjct: 132 PAFFDYSNSARIIRPGENDSEANNVLLMTVVRPKYRITTDVIHTICKGFGNVLRIVIFKK 191
Query: 97 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
N G+QA++++ VQ+A AK+ L IY G C L I ++R L++ N+ + DYT
Sbjct: 192 N-GVQAMVEFDTVQSATHAKQNLHNCDIY-SGCCTLKIDFARPKTLTVYKNDGETYDYTN 249
Query: 157 PSTPMVNSQPSILGQQPVP 175
P ++L P P
Sbjct: 250 PGLNAAAQGRALLDDPPEP 268
>gi|119601315|gb|EAW80909.1| hCG41678, isoform CRA_b [Homo sapiens]
Length = 446
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S VL +EN+ Y TLDVLH +FS FG V+ I F K+ QAL+QY D +
Sbjct: 235 GMAMAGQSLVLRIIVENLFYPTTLDVLHQIFSKFGTVKTIT-FIKDNQFQALLQYTDPEN 293
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
A K +L+ Y+ L I +S+ L++K NND+SRDY + P
Sbjct: 294 AQHTKLSLDWQNTYNACH-TLCIDFSKLISLNVKYNNDKSRDYHARTCP 341
>gi|26351857|dbj|BAC39565.1| unnamed protein product [Mus musculus]
Length = 329
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 158 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 216
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 217 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 255
>gi|188528957|ref|NP_001120904.1| heterogeneous nuclear ribonucleoprotein L-like [Xenopus (Silurana)
tropicalis]
gi|183986223|gb|AAI66362.1| hnrpll protein [Xenopus (Silurana) tropicalis]
Length = 531
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 12/189 (6%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G V++I +F +N G+QA++++ V +A AK +
Sbjct: 155 NKVLLLSIQNPLYPITVDVLYSVCNPVGKVERIVIFKRN-GIQAMVEFDSVHSAQKAKSS 213
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y+R T L++ N++ S DY S P ++ + G+Q ++G
Sbjct: 214 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDY---SKPYLSRRDRGKGRQRQAILG 269
Query: 179 A--TANQYNG-AQFAP--PPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPM 233
++ +Y+G P P P M A P S M P P GS+ M
Sbjct: 270 DHPSSYRYDGYGNHGPLLPLPNLYRMGSRDTPELVAYPLPQASSSYMHGGP--PVGSVAM 327
Query: 234 GPGMMQMHM 242
G+ Q M
Sbjct: 328 VSGLHQQKM 336
>gi|119601314|gb|EAW80908.1| hCG41678, isoform CRA_a [Homo sapiens]
Length = 183
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VL +EN+ Y TLDVLH +FS FG V+ I F K+ QAL+QY D + A K
Sbjct: 6 QSLVLRIIVENLFYPTTLDVLHQIFSKFGTVKTIT-FIKDNQFQALLQYTDPENAQHTKL 64
Query: 118 ALEGHCIYDGGFC-KLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
+L+ Y+ C L I +S+ L++K NND+SRDY + P
Sbjct: 65 SLDWQNTYNA--CHTLCIDFSKLISLNVKYNNDKSRDYHARTCP 106
>gi|354483412|ref|XP_003503887.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cricetulus
griseus]
Length = 498
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 147 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 205
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 206 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 244
>gi|355694928|gb|AER99833.1| heteroproteinous nuclear ribonucleoprotein L [Mustela putorius
furo]
Length = 249
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 148 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQRAKAS 206
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 207 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 245
>gi|194391004|dbj|BAG60620.1| unnamed protein product [Homo sapiens]
Length = 240
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
D ++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ
Sbjct: 112 DSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQ 170
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
+A AK +L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 171 SAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 217
>gi|194375115|dbj|BAG62670.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
D ++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ
Sbjct: 51 DSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQ 109
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
+A AK +L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 110 SAQRAKASLNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPN 156
>gi|119620775|gb|EAX00370.1| heterogeneous nuclear ribonucleoprotein L-like, isoform CRA_c [Homo
sapiens]
Length = 175
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ + V A AK A
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMLMFESVLCAQKAKAA 119
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 120 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 157
>gi|386768327|ref|NP_001246433.1| smooth, isoform Z [Drosophila melanogaster]
gi|383302606|gb|AFH08186.1| smooth, isoform Z [Drosophila melanogaster]
Length = 491
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 165
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + S
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKSLFSI 185
Query: 166 PS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 207
P +L QP P++G GA F PP P H T W
Sbjct: 186 PENVVMLESQP-PLLGP------GAAF--PPFGAPEYHTTTPENW 221
>gi|354488933|ref|XP_003506620.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Cricetulus
griseus]
Length = 576
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP-------DVQT 111
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+++YP V
Sbjct: 193 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVEYPLFSFRFESVLC 251
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ 171
A AK AL G IY G C L I Y+R T L++ N++ S DYT P + + G+
Sbjct: 252 AQKAKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGR 307
Query: 172 QPVPMVGATANQYNGAQFAP-----PPPEQPMMHQPTAAGWGAVP-PASQSMPMMGNHPY 225
Q ++G + + + P P + M A P P + S M G
Sbjct: 308 QRQAILGDHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGS-- 365
Query: 226 MPPGSMPMGPGMMQMHM 242
P GS+ M G+ Q+ M
Sbjct: 366 -PSGSVVMVSGLHQLKM 381
>gi|302820932|ref|XP_002992131.1| hypothetical protein SELMODRAFT_430388 [Selaginella moellendorffii]
gi|300140057|gb|EFJ06786.1| hypothetical protein SELMODRAFT_430388 [Selaginella moellendorffii]
Length = 695
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
S VL ++ N Y + + VLH VF G V+KI + + G+ IQ+ V+TA K+
Sbjct: 141 SKVLAVTVTNPIYPIDVYVLHRVFCPHGSVEKITI-SRKLGICGYIQFDSVKTAAHVKDL 199
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP-MVNSQPSILGQQPVPMV 177
L I+DG CK+ I Y++ +L + N+D +RD+ S P V S PSILG PV V
Sbjct: 200 LNDRHIFDGC-CKMEIQYAKSQELGVYFNDDNNRDFKDTSIPSRVRSDPSILGAPPVESV 258
>gi|348530603|ref|XP_003452800.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Oreochromis niloticus]
Length = 539
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ V+ A AK A
Sbjct: 162 NKVLLLSIQNPLYPITTDVLYTVCNPVGNVLRIVIFKRN-GIQAMVEFESVKDAQKAKLA 220
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R L++ NN+ S DYT P
Sbjct: 221 LNGADIY-AGCCTLKIEYARPNRLNVICNNNTSWDYTKP 258
>gi|386768319|ref|NP_001246429.1| smooth, isoform U [Drosophila melanogaster]
gi|383302602|gb|AFH08182.1| smooth, isoform U [Drosophila melanogaster]
Length = 515
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 63 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 121
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 165
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + ++ +
Sbjct: 122 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPIK 180
Query: 166 PSILGQQPV---PMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 212
G+ P+ P+ G Y+ + F+ P + QP G GA P
Sbjct: 181 EIGNGRSPLLQEPLYGTRPQPYSKSLFSIPENVVMLESQPPLLGPGAAFP 230
>gi|389584747|dbj|GAB67479.1| polypyrimidine tract binding protein [Plasmodium cynomolgi strain
B]
Length = 746
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 117
S V+L S+ N+ Y V +++++ +FS G V+KI F +N + QAL+Q+P+++TA A +
Sbjct: 399 SRVILVSVLNLHYPVDIELIYYLFSKCGTVEKIITFSRNPLIYQALVQFPNIETAQEAIK 458
Query: 118 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYT 155
L IYDG C + I YS +L +K NN SRDYT
Sbjct: 459 TLHNRNIYDG--CNTIQIQYSFLKELVVKANNSSSRDYT 495
>gi|195487089|ref|XP_002091762.1| GE13838 [Drosophila yakuba]
gi|194177863|gb|EDW91474.1| GE13838 [Drosophila yakuba]
Length = 491
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 165
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + S
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKSLFSI 185
Query: 166 PS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 207
P +L QP P++G GA F PP P H T W
Sbjct: 186 PENVVMLESQP-PLLGP------GAAF--PPFGAPEYHPTTPENW 221
>gi|326430347|gb|EGD75917.1| polypyrimidine tract-binding protein 1 isoform d [Salpingoeca sp.
ATCC 50818]
Length = 496
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 13/125 (10%)
Query: 53 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 112
+ P S L+A + N+ Y+++L LH +FS G V K+ F K LQAL+Q +A
Sbjct: 113 RDTNPPSKCLIAKVTNLSYSISLQTLHSLFSRAGRVDKMVCFMKQSFLQALVQMDSEASA 172
Query: 113 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND--RSRDY---------TLPSTPM 161
+A+ L IY G C L + +S+ +++++ ++D R+RD+ TLP+TP
Sbjct: 173 ALARRMLNNQDIY-SGCCHLAVEFSKLNEVTVRQDSDPARARDFIRSPLMDGETLPNTP- 230
Query: 162 VNSQP 166
+N QP
Sbjct: 231 INLQP 235
>gi|290993108|ref|XP_002679175.1| predicted protein [Naegleria gruberi]
gi|284092791|gb|EFC46431.1| predicted protein [Naegleria gruberi]
Length = 482
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 51 DGKKLEPESNVLLASIENMQYA-VTLDVLHMVFSAFGP--VQKIAMFDKNGGLQALIQYP 107
+GK+ +P +++LL +I + V +D LH +FS G ++KI MF+K GLQALIQY
Sbjct: 116 NGKQQDP-NHILLVTISKSKSTDVNIDSLHEIFSLKGSCSIEKIVMFNKTAGLQALIQYK 174
Query: 108 DVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
+V A+ A++ L+G + L I +S DL++ N+D++RDYT P
Sbjct: 175 NVNDALEARKKLQGETPFSTS-ENLLIQFSNLKDLTVHQNSDKARDYTKP 223
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNP----------YLPVAPSAIDASGQLSVGLDGKKL 55
L I +S DL+V S ++RDYT P + + +S L
Sbjct: 198 LLIQFSNLKDLTVHQNSDKARDYTKPPQQPQSSVSSPTTTNTTNSTNTVAVSSTLPSTNN 257
Query: 56 EPES---NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 112
P + +LL S N + D+L +FS +G + +I +F K AL+Q + A
Sbjct: 258 APTTVMKRILLVSNFN-DKKMNCDLLFNLFSCYGYIHRIKIF-KTKPDHALVQMASHKQA 315
Query: 113 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
+ A +L+G I+ L +++S+HT ++ +++ +D+T
Sbjct: 316 LNAISSLKGVQIFGKT---LSVNFSKHTFINTNKSDNNMKDFT 355
>gi|156100793|ref|XP_001616090.1| polypyrimidine tract binding protein [Plasmodium vivax Sal-1]
gi|148804964|gb|EDL46363.1| polypyrimidine tract binding protein, putative [Plasmodium vivax]
Length = 747
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 9/126 (7%)
Query: 33 LPVAPSAIDASGQLSVGLDGKKLEPESN-VLLASIENMQYAVTLDVLHMVFSAFGPVQKI 91
+P A A++ + + + GK+ + ES+ V+L S+ N+ Y V +++++ +FS G V+KI
Sbjct: 377 VPSAKDALEGANKKT----GKQNKNESSRVILVSVLNLHYPVDIELIYYLFSKCGTVEKI 432
Query: 92 AMFDKNGGL-QALIQYPDVQTAVVAKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNND 149
F +N + QAL+Q+ +++TA A + L IYDG C + I YS +L +K NN
Sbjct: 433 ITFSRNPLIYQALVQFQNIETAQEAIKTLHNRNIYDG--CNTIQIQYSFLKELVVKANNS 490
Query: 150 RSRDYT 155
SRDYT
Sbjct: 491 SSRDYT 496
>gi|297713191|ref|XP_002833087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Pongo abelii]
Length = 339
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 6/131 (4%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA++++ VQ+A AK +
Sbjct: 202 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEFDSVQSAQWAKAS 260
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV---NSQPSILGQQPVP 175
L G IY G C L + Y++ T L++ ++ + DYT P+ S P+ +QP P
Sbjct: 261 LNGADIY-SGCCALKMEYAKPTRLNVFKSDQDTWDYTNPNLSGQGDPGSNPNKRQRQP-P 318
Query: 176 MVGATANQYNG 186
++G +Y G
Sbjct: 319 LLGDHPAEYGG 329
>gi|386768317|ref|NP_001246428.1| smooth, isoform T [Drosophila melanogaster]
gi|383302601|gb|AFH08181.1| smooth, isoform T [Drosophila melanogaster]
Length = 552
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 165
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVKEIGNG 185
Query: 166 PSILGQQPV 174
S L Q+P+
Sbjct: 186 RSPLLQEPL 194
>gi|432843758|ref|XP_004065651.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Oryzias
latipes]
Length = 582
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 14/176 (7%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
++ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ V+ A AK
Sbjct: 202 KNKVLLLSIQNPLYPITTDVLYTVCNPVGNVLRIVIFKRN-GIQAMVEFESVEDAQKAKL 260
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
AL G IY G C L I Y+R L++ N++ S DYT P + G+Q ++
Sbjct: 261 ALNGADIYSGC-CTLKIEYARPNRLNVVRNDNTSWDYTKPFLLHRDVVKRGKGRQRQAIL 319
Query: 178 GAT-ANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMP 232
G +N Y P P++ PT + + +S+ + M ++P + P + P
Sbjct: 320 GEHPSNGYG--------PHCPLLTLPTNSRYRR---SSEQVQDMISYPPLLPKTFP 364
>gi|339254278|ref|XP_003372362.1| hypothetical protein Tsp_10607 [Trichinella spiralis]
gi|316967236|gb|EFV51693.1| hypothetical protein Tsp_10607 [Trichinella spiralis]
Length = 235
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 81 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 140
VF FG V +I +F KN QALIQ+ D +A AK AL+G + +G C L I +S+
Sbjct: 16 VFVTFGTVLRIIIFHKNNNFQALIQFLDPISAYAAKMALDGKPLINGC-CTLKIEFSKLA 74
Query: 141 DLSIKVNNDRSRDYTLPSTP 160
L++K NN++SRD+T P+ P
Sbjct: 75 TLNVKYNNEKSRDFTNPNLP 94
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLP 34
G CTL+I +S L+VK+ + +SRD+TNP LP
Sbjct: 62 GCCTLKIEFSKLATLNVKYNNEKSRDFTNPNLP 94
>gi|399216457|emb|CCF73145.1| unnamed protein product [Babesia microti strain RI]
Length = 526
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVAKE 117
+ +LL SI N+ Y V ++++H +FS FG V KI F KN QA +Q+ + A
Sbjct: 154 TKILLVSITNLVYPVDIELIHFLFSKFGTVNKIVCFSKNPATFQAFVQFEHHSQSKEALA 213
Query: 118 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSIL 169
AL IY C +H+SYS DL +K N+ RS DYT S P+++ P L
Sbjct: 214 ALNNRNIYSD--CNTIHVSYSNMEDLIVKSNSARSWDYT--SAPLLDRPPDYL 262
>gi|405962643|gb|EKC28300.1| Heterogeneous nuclear ribonucleoprotein L [Crassostrea gigas]
Length = 551
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+++LL +I N QY VT+D++H + S +G V +I +F K+ G+Q+++++ DV++A AK+A
Sbjct: 119 NHILLFTILNPQYPVTVDIMHTICSPYGQVVRIVIFRKS-GMQSMVEFDDVESAKRAKQA 177
Query: 119 LEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY C L I Y++ L++ N+ S DYT P+
Sbjct: 178 LNGADIYSD--CNTLKIEYAKTDKLNVFKNDQSSWDYTNPN 216
>gi|281363805|ref|NP_001027439.2| smooth, isoform H [Drosophila melanogaster]
gi|40882465|gb|AAR96144.1| RE74969p [Drosophila melanogaster]
gi|272432576|gb|AAZ52803.2| smooth, isoform H [Drosophila melanogaster]
Length = 480
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 165
++ A A+E L G IY G C L I Y++ L++ N D S DYTL ST + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL-STGEILPK 184
Query: 166 PSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 207
P +LG GA F PP P H T W
Sbjct: 185 PPLLGP--------------GAAF--PPFGAPEYHTTTPENW 210
>gi|291224827|ref|XP_002732404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Saccoglossus kowalevskii]
Length = 423
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 61 VLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ IE + V DV+H + + FGPVQ+I +F KN G+Q +I+YP + +A AK +
Sbjct: 87 IEFEDIEGAKACVNYAQDVMHTICNPFGPVQRIVIFKKN-GVQTMIEYPLIYSASRAKAS 145
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L G IY G C L I Y+R T L++ N++ + DYT P+
Sbjct: 146 LNGADIY-SGCCTLKIEYARPTRLNVYKNDNETYDYTNPT 184
>gi|386768311|ref|NP_001246426.1| smooth, isoform M [Drosophila melanogaster]
gi|383302598|gb|AFH08179.1| smooth, isoform M [Drosophila melanogaster]
Length = 497
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM---- 161
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPIK 185
Query: 162 -VNSQPSILGQQPV---PMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 207
+ + S L Q+P+ P++G GA F PP P H T W
Sbjct: 186 EIGNGRSPLLQEPLYEPPLLGP------GAAF--PPFGAPEYHTTTPENW 227
>gi|386768313|ref|NP_001246427.1| smooth, isoform O [Drosophila melanogaster]
gi|383302599|gb|AFH08180.1| smooth, isoform O [Drosophila melanogaster]
Length = 494
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 24/170 (14%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 165
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + ++ S+
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEILPSK 185
Query: 166 P--------SILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 207
+L QP P++G GA F PP P H T W
Sbjct: 186 SLFSIPENVVMLESQP-PLLGP------GAAF--PPFGAPEYHTTTPENW 226
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ-----YPDVQTAV 113
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+I + V A
Sbjct: 263 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMISLIELMFESVLCAQ 321
Query: 114 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSI 168
AK AL G IY G C L I Y+R T L++ N++ S DYT P + + +I
Sbjct: 322 KAKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAI 380
Query: 169 LGQQP 173
LG+ P
Sbjct: 381 LGEHP 385
>gi|195335919|ref|XP_002034610.1| GM19821 [Drosophila sechellia]
gi|194126580|gb|EDW48623.1| GM19821 [Drosophila sechellia]
Length = 237
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 51 DGKKLEPES----NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ ++LL +I N Y +T+DVLH + GPV +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGPVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPS 158
++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLST 178
>gi|328724092|ref|XP_001949062.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Acyrthosiphon pisum]
Length = 428
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 8/138 (5%)
Query: 27 DYTNPYLPVAP---SAIDASGQLSVGLDGKKLEPES---NVLLASIENMQYAVTLDVLHM 80
D TN L A + + +S DG++ E+ ++LL +I + Y + DV+H
Sbjct: 15 DQTNKRLRTADYDRESRTTNSSVSSYEDGRRKNAETQPNHILLLTITKVTYPINTDVIHT 74
Query: 81 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 140
+ G V +I +F K G +QA+++Y +V+ A+ AK+ ++G IY G C L + Y++ +
Sbjct: 75 ISKDHGNVMRIVIFRKRG-VQAMVEYEEVEQAIRAKQLMDGADIYQGC-CTLRVEYAKPS 132
Query: 141 DLSIKVNNDRSRDYTLPS 158
L++ N+ + DYT P+
Sbjct: 133 KLNVYKNDSETWDYTTPN 150
>gi|17136488|ref|NP_476731.1| smooth, isoform A [Drosophila melanogaster]
gi|78707266|ref|NP_001027440.1| smooth, isoform E [Drosophila melanogaster]
gi|1321808|emb|CAA66282.1| smooth [Drosophila melanogaster]
gi|7302450|gb|AAF57535.1| smooth, isoform A [Drosophila melanogaster]
gi|71911687|gb|AAZ52802.1| smooth, isoform E [Drosophila melanogaster]
Length = 475
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQ 165
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + P
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTEP----- 180
Query: 166 PSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 207
P++G GA F PP P H T W
Sbjct: 181 ---------PLLGP------GAAF--PPFGAPEYHTTTPENW 205
>gi|195056920|ref|XP_001995181.1| GH22768 [Drosophila grimshawi]
gi|193899387|gb|EDV98253.1| GH22768 [Drosophila grimshawi]
Length = 482
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 75 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 133
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI-KVNNDRSRDYTLPSTP 160
++ +A A+E L G IY G C L I +++ L++ K +D S DYTL + P
Sbjct: 134 DNLDSATRARENLNGADIY-AGCCTLKIDFAKPEKLNVYKNESDTSWDYTLSTEP 187
>gi|326428995|gb|EGD74565.1| hypothetical protein PTSG_05929 [Salpingoeca sp. ATCC 50818]
Length = 554
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG------GLQALIQYPDVQTAV 113
VL+ ++ N Y + +DV++ V S G V +I M KNG +AL+++PD TA
Sbjct: 112 KVLMMTVMNASYPINVDVIYAVCSPLGRVLRIVMIRKNGVQSAPPTARALVEFPDANTAA 171
Query: 114 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
+L+G IY G C L I YS+ ++++ N++ +RD+T+
Sbjct: 172 AVMSSLQGANIYQ-GCCTLRIEYSKADRVNVRYNSEETRDFTV 213
>gi|351695246|gb|EHA98164.1| Heterogeneous nuclear ribonucleoprotein L [Heterocephalus glaber]
Length = 539
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ-TAVVAKE 117
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA+++YP ++ +A AK
Sbjct: 130 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEYPLLRNSAQRAKA 188
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
+L G IY G C L I Y++ T L++ N+ + DYT P+
Sbjct: 189 SLNGADIYSGC-CTLKIEYAKPTRLNVFKNDQDTWDYTNPN 228
>gi|195431604|ref|XP_002063826.1| GK15699 [Drosophila willistoni]
gi|194159911|gb|EDW74812.1| GK15699 [Drosophila willistoni]
Length = 478
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 71 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 129
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTP 160
+ A A+E L G IY G C L I Y++ L++ N D S DYTL + P
Sbjct: 130 DSLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTEP 183
>gi|294946321|ref|XP_002785022.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239898406|gb|EER16818.1| polypyrimidine tract binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 566
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 18 VKFQSHRSRDYTNPYLPVAPSAID------ASGQLSVGLDGKK---LEPESNVLLASIEN 68
++F++ + Y P ID A + S + G++ L P + +LL +I N
Sbjct: 77 IEFENETEARRCHAYYSANPLTIDGQRLDFAISRFS-EITGRRYPDLHPPNRILLFTITN 135
Query: 69 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGG 128
+ Y V + ++ V S + ++K+ +F + LIQ ++ AV AK L+G I+
Sbjct: 136 VVYPVNVSMIAQVMSRYNALEKVVIFTRGNATHCLIQTSSLEAAVAAKTQLDGQNIFT-- 193
Query: 129 FCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
C + + +S + L +K NN+RS DYT PS P
Sbjct: 194 HCNTIRVQFSELSKLEVKYNNERSWDYTNPSLP 226
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 5 TLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-PSAIDASGQL---SVGLDGKKLEPESN 60
T+R+ +S + L VK+ + RS DYTNP LP P A+ SG L G+ G P
Sbjct: 197 TIRVQFSELSKLEVKYNNERSWDYTNPSLPSGPPGAMAGSGLLGPQQRGMSGVAATPVVF 256
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK--NGGLQALIQYPDVQTAVVAKEA 118
VL + ++ T D L +F+ +G V K+ + K N L + + TA+ +
Sbjct: 257 VLGLNEKD----TTPDDLAALFAVYGNVVKVKIMYKARNSALVQMQTVGECHTAIAHLKG 312
Query: 119 LEGH 122
+ H
Sbjct: 313 IRLH 316
>gi|358254215|dbj|GAA54232.1| heterogeneous nuclear ribonucleoprotein L, partial [Clonorchis
sinensis]
Length = 561
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Query: 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
L ++VLL ++ N+Q+ VTL V+H + S F V +I MF K +QA++++ V+ A
Sbjct: 177 LSTVNHVLLYTVFNVQHPVTLKVIHQITSMFAEVVRIVMFRK-SNIQAMVEFKSVEDARR 235
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
K+ L G IY G C L + Y+R T L++K N++ + D+
Sbjct: 236 VKQNLNGADIY-SGCCTLKVDYARPTRLTVKRNDEDTWDF 274
>gi|86170640|ref|XP_966055.1| polypyrimidine tract binding protein, putative [Plasmodium
falciparum 3D7]
gi|46362297|emb|CAG25235.1| polypyrimidine tract binding protein, putative [Plasmodium
falciparum 3D7]
Length = 663
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 117
S V+L S+ N+ Y V +++++ +FS G V+KI F +N L QAL+Q+ +V+TA A +
Sbjct: 315 SKVILVSVINLHYPVDIELIYYLFSKCGTVEKIITFSRNPVLYQALVQFDNVETAKEAIK 374
Query: 118 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQP 166
L IYDG C ++I YS +L IK NN S DYT+ + + P
Sbjct: 375 TLHNRNIYDG--CNTINIQYSFLKELVIKGNNSSSWDYTISNEKKTKNFP 422
>gi|291490719|gb|ADE06675.1| MIP19475p [Drosophila melanogaster]
Length = 206
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 77 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 135
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM 161
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + M
Sbjct: 136 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTREM 190
>gi|195380768|ref|XP_002049133.1| GJ21415 [Drosophila virilis]
gi|194143930|gb|EDW60326.1| GJ21415 [Drosophila virilis]
Length = 480
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 74 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 132
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI-KVNNDRSRDYTLPSTP 160
+ A A+E L G IY G C L I +++ L++ K D S DYTL + P
Sbjct: 133 DSLDAATRARENLNGADIY-AGCCTLKIDFAKPEKLNVYKNETDTSWDYTLSTEP 186
>gi|442624264|ref|NP_001261093.1| smooth, isoform AB [Drosophila melanogaster]
gi|440214533|gb|AGB93625.1| smooth, isoform AB [Drosophila melanogaster]
Length = 509
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM 161
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + M
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGEM 181
>gi|195123985|ref|XP_002006482.1| GI18546 [Drosophila mojavensis]
gi|193911550|gb|EDW10417.1| GI18546 [Drosophila mojavensis]
Length = 481
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + + G V +I +F KN G+QA++++
Sbjct: 74 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICNPHGQVLRIVIFKKN-GVQAMVEF 132
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI-KVNNDRSRDYTLPSTP 160
+ A A+E L G IY G C L I +++ L++ K D S DYTL + P
Sbjct: 133 DSLDAATRARENLNGADIY-AGCCTLKIDFAKPEKLNVYKNETDTSWDYTLSTEP 186
>gi|401402366|ref|XP_003881231.1| gg11844, related [Neospora caninum Liverpool]
gi|325115643|emb|CBZ51198.1| gg11844, related [Neospora caninum Liverpool]
Length = 460
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKEAL 119
V+LAS+ N+ Y V +D++H +FS +G ++KI F K+ + QALIQ+ + + A A L
Sbjct: 15 VVLASVTNLLYPVDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQNAEQARHALMNL 74
Query: 120 EGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 158
IYDG C L I SR +L +K N +S DYT+ S
Sbjct: 75 HSRNIYDG--CNTLQIQPSRLNELVVKNNTQKSWDYTVQS 112
>gi|226481403|emb|CAX73599.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 535
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 54 KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 113
+L PES VL+ ++ N QY +T+DV+H + + G V +I + K +QA++++ + + A
Sbjct: 109 ELPPESRVLILTVYNAQYPITVDVIHQITAKHGRVLRIVILRKT-RIQAMVEFKNTEEAR 167
Query: 114 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
AK L G IY G C L + ++R T L++ N+ S D+ P
Sbjct: 168 TAKRHLNGADIY-SGCCTLKVEFARPTRLTVTRNDQDSWDFENP 210
>gi|386768305|ref|NP_001246423.1| smooth, isoform K [Drosophila melanogaster]
gi|383302595|gb|AFH08176.1| smooth, isoform K [Drosophila melanogaster]
Length = 535
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 7/119 (5%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPMVNS 164
++ A A+E L G IY G C L I Y++ L++ N D S DYTL + +++
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVATLST 184
>gi|256080365|ref|XP_002576452.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|238661720|emb|CAZ32689.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 544
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 54 KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 113
+L PES VL+ ++ N QY +T+DV+H + + G V +I + K +QA++++ + + A
Sbjct: 118 ELPPESRVLMLTVYNAQYPITVDVIHQITAKHGRVLRIVILRKT-RIQAMVEFKNTEEAR 176
Query: 114 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
AK L G IY G C L + ++R T L++ N+ S D+ P
Sbjct: 177 TAKRHLNGADIY-SGCCTLKVEFARPTRLTVTRNDQDSWDFENP 219
>gi|386768321|ref|NP_001246430.1| smooth, isoform V [Drosophila melanogaster]
gi|383302603|gb|AFH08183.1| smooth, isoform V [Drosophila melanogaster]
Length = 540
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPS 158
++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLST 178
>gi|339233762|ref|XP_003381998.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316979122|gb|EFV61952.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 820
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
D + E SNVL+ ++N +Y +T +V+H + G V +I + ++ G+QAL+++ D++
Sbjct: 109 DQLETEAPSNVLIIYVQNAKYPITTEVIHQICKPIGFVNRI-IINRRDGIQALVEFRDIE 167
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQ 165
TA VAK+ L G IY G C + I +++ L R+ P+ P+ N+Q
Sbjct: 168 TARVAKQRLNGCDIY-SGCCTVKIEFAKVQFLDSYKQTTRTCKAYTPNVPVTNAQ 221
>gi|386768329|ref|NP_001246434.1| smooth, isoform AA [Drosophila melanogaster]
gi|383302607|gb|AFH08187.1| smooth, isoform AA [Drosophila melanogaster]
Length = 508
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 63 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 121
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPS 158
++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 122 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLST 173
>gi|325184968|emb|CCA19460.1| hypothetical protein SELMODRAFT_173175 [Albugo laibachii Nc14]
Length = 466
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
+LL +++N Y +T D++ +FS FG V+KI +F+K GLQ LIQ ++ A AK+AL
Sbjct: 133 ILLVTVQNPLYPITADLMASIFSYFGKVEKIVIFEKAIGLQCLIQLSFIEDATAAKKALN 192
Query: 121 GHCIYDGGFCKLHISYSRHT-DLSIKVNNDRSRDYT 155
G I+ C L I YS+ + +L +K N R+ D+T
Sbjct: 193 GVNIFPDCCC-LIIHYSKLSQELVVKTNGPRTWDFT 227
>gi|391333478|ref|XP_003741140.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Metaseiulus occidentalis]
Length = 485
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 37 PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK 96
P +D +G+ + L+P ++++L +I N Y + ++V++ + G VQ+I +F K
Sbjct: 2 PFDMDDNGRAPKRQRTEALKP-NHIVLMTIRNALYPIDVEVIYKISHTLGRVQRIVIFRK 60
Query: 97 NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
N G+QAL+++ +V A AK L+G IY G C L + Y++ + L++ N+ + DYT
Sbjct: 61 N-GVQALVEFENVDQATRAKNELDGADIYQGC-CTLKLEYAKPSKLNVYKNDKDTWDYT 117
>gi|327287724|ref|XP_003228578.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Anolis
carolinensis]
Length = 553
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 42/210 (20%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+NVLL +I N Y++T DVL+ + + GPVQ+I +F KNG +QA++++ VQ+A AK +
Sbjct: 156 NNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKAS 214
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVG 178
L G IY G C L I Y++ T L++ N+ + DYT P++ GQ G
Sbjct: 215 LNGADIY-SGCCTLKIEYAKPTRLNVFKNDQDTWDYT---------NPNLSGQ------G 258
Query: 179 ATANQYNGAQFAPP-----PPEQPMMHQPTA-----AGWGAVPPASQSMPMMGNHPYMPP 228
N Q PP P E H G+G PP + M
Sbjct: 259 EPGGNPNKRQRQPPLLGDHPAEYGGPHGGYHGHYHDEGYGPPPPHYEGRRM--------- 309
Query: 229 GSMPMGPGMMQMHM-PGQSGMQHHHGAMPP 257
GP + H PG+ G Q+ H PP
Sbjct: 310 -----GPPVGGRHRGPGRYGPQYGHPPPPP 334
>gi|194881395|ref|XP_001974833.1| GG20898 [Drosophila erecta]
gi|190658020|gb|EDV55233.1| GG20898 [Drosophila erecta]
Length = 210
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 51 DGKKLEPESN----VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQY 106
D ++ PE+ +LL +I N Y +T+DVLH + G V +I +F KN G+QA++++
Sbjct: 68 DLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN-GVQAMVEF 126
Query: 107 PDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPS 158
++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 127 DNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLST 178
>gi|221484270|gb|EEE22566.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
GT1]
gi|221505749|gb|EEE31394.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
VEG]
Length = 446
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 57 PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 114
PES V+LAS+ N+ Y V +D++H +FS +G ++KI F K+ + QALIQ+ A
Sbjct: 10 PESFRVVLASVTNLLYPVDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARH 69
Query: 115 AKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 158
A L IYDG C L I SR +L +K N +S DYT+ S
Sbjct: 70 ALMNLHSRNIYDG--CNTLQIQPSRLNELVVKNNTQKSWDYTVQS 112
>gi|68068337|ref|XP_676078.1| polypyrimidine tract binding protein [Plasmodium berghei strain
ANKA]
gi|56495606|emb|CAH97516.1| polypyrimidine tract binding protein, putative [Plasmodium berghei]
Length = 453
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 117
S V+L S+ NMQY V +++++ +FS G V+KI K + QAL+Q +Q A A +
Sbjct: 105 SKVILVSVVNMQYPVDMELIYYLFSKCGIVEKIITISKKTSIFQALVQLESIQVAKEAIK 164
Query: 118 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 158
L IYDG C L I YS +L IK NN ++ DYT P+
Sbjct: 165 TLHNRNIYDG--CNTLQIQYSFLKELIIKNNNSQAWDYTTPN 204
>gi|237838325|ref|XP_002368460.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
ME49]
gi|211966124|gb|EEB01320.1| polypyrimidine track-binding protein, putative [Toxoplasma gondii
ME49]
Length = 446
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 57 PES-NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVV 114
PES V+LAS+ N+ Y V +D++H +FS +G ++KI F K+ + QALIQ+ A
Sbjct: 10 PESFRVVLASVTNLLYPVDIDLIHYLFSKYGEIEKIVTFSKSPTMYQALIQFQSPDQARH 69
Query: 115 AKEALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPS 158
A L IYDG C L I SR +L +K N +S DYT+ S
Sbjct: 70 ALMNLHSRNIYDG--CNTLQIQPSRLNELVVKNNTQKSWDYTVQS 112
>gi|149641747|ref|XP_001507993.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L, partial
[Ornithorhynchus anatinus]
Length = 360
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 76 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
DVL+ V + G VQ+I +F +NG +QA++++ V A AK AL G IY G C L I
Sbjct: 1 DVLYTVCNPVGKVQRIVIFKRNG-IQAMVEFESVLCAQKAKAALNGADIY-AGCCTLKIE 58
Query: 136 YSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPE 195
Y+R T L++ N++ S DYT P + + G+Q ++G + + + P
Sbjct: 59 YARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPL 115
Query: 196 QPMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHM 242
P+ P+ G+ +P AS S GN P GS+ M G+ Q+ M
Sbjct: 116 LPL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGN----PSGSVVMVSGLHQLKM 165
>gi|256071583|ref|XP_002572119.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645120|emb|CCD60181.1| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 710
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GP +R+ +S+ T V + H+S+ SA+D++ ++
Sbjct: 109 VGPNRVRLEFSSETITPVIDRKHQSQS----------SALDSNS-------------PTH 145
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEA 118
+L I N +Y +T+DV+ + S G + + + KN L+AL+++ +V+ A AKE
Sbjct: 146 ILHLDISNAEYPITVDVIKAICSPHGNILRTFIGKKNVDRSLEALVEFENVEEARAAKEQ 205
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS----TPMVNS--QPSILG 170
L+G IY G C L ++YSR + + N+ S D+T PS P+ NS Q ++LG
Sbjct: 206 LDGADIYS-GCCNLTVAYSRLQRVHVTQNDSESWDFTGPSGNLEGPLNNSSTQRTLLG 262
>gi|70926044|ref|XP_735622.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509445|emb|CAH87610.1| hypothetical protein PC302548.00.0 [Plasmodium chabaudi chabaudi]
Length = 201
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 117
S V+L S+ NMQY V +++++ +FS G V+KI K + QAL+Q ++ A A +
Sbjct: 79 SKVILVSVVNMQYPVDIELIYYLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIK 138
Query: 118 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 167
L IYDG C L I YS +L +K NN +S DYT S P N S
Sbjct: 139 TLHNRNIYDG--CNTLQIQYSFLKELIVKNNNSQSWDYT-TSNPQRNKSNS 186
>gi|112280295|gb|ABI14681.1| polypyrimidine tract binding protein [Plasmodium chabaudi chabaudi]
gi|112280297|gb|ABI14682.1| polypyrimidine tract binding protein [Plasmodium chabaudi chabaudi]
Length = 142
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKE 117
S V+L S+ NMQY V +++++ +FS G V+KI K + QAL+Q ++ A A +
Sbjct: 28 SKVILVSVVNMQYPVDIELIYYLFSKCGVVEKIITISKKTSIFQALVQLESIEVAKEAIK 87
Query: 118 ALEGHCIYDGGFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPS 167
L IYDG C L I YS +L +K NN +S DYT S P N S
Sbjct: 88 TLHNRNIYDG--CNTLQIQYSFLKELIVKNNNSQSWDYT-TSNPQRNKNNS 135
>gi|281205212|gb|EFA79405.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 437
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 81 VFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT 140
+FS +G V +I +F K G LQA +++ +A VAK+AL G IY G C L I ++R
Sbjct: 120 IFSPYGRVLRIVIFQKKG-LQAFVEFESPYSAWVAKDALNGQDIYTGS-CTLQIDFARVN 177
Query: 141 DLSIKVNNDRSRDYTL 156
L++KVN++++ DYT+
Sbjct: 178 KLNVKVNDEKTTDYTM 193
>gi|359497338|ref|XP_003635487.1| PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding
protein homolog 2-like, partial [Vitis vinifera]
Length = 273
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 60 NVLLASIENMQ-YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE- 117
NVLL +IE + V ++VLH+VFSAFG V KI +F+K QAL+Q+ D +TA AK+
Sbjct: 111 NVLLVTIEGADAHLVNINVLHLVFSAFGFVHKITIFEKTVRFQALVQFSDSETASTAKKN 170
Query: 118 ALEGHCIYDGGF------CKLHISYSRHTDLS 143
A +G I C L I++S H L
Sbjct: 171 AFDGRSIPRYLLPEHLRPCTLRITFSAHIYLK 202
>gi|55733800|gb|AAV59307.1| putative polypyrimidine track-binding protein [Oryza sativa
Japonica Group]
Length = 389
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%)
Query: 30 NPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
N Y+ + + Q S G + + + +LL +I +M Y +T++VLH VF A+G V+
Sbjct: 64 NVYMQFSSHQELTTDQNSHGRNSDQESEPNRILLVTIHHMMYPITVEVLHQVFKAYGYVE 123
Query: 90 KIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121
KI F K+ G QALIQY +Q A+ A AL G
Sbjct: 124 KIVTFQKSAGFQALIQYQSLQEAMDAFGALHG 155
>gi|345494580|ref|XP_001604099.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Nasonia
vitripennis]
Length = 520
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 42/140 (30%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP----------- 107
++VLL +I N Y +T++VLH + G VQ+I +F KNG +QA+++YP
Sbjct: 33 NHVLLFTIINPVYPITVEVLHAISHQSGTVQRIVIFKKNG-VQAMVEYPLHTAILLFVVF 91
Query: 108 -----------------------------DVQTAVVAKEALEGHCIYDGGFCKLHISYSR 138
V++A AKEAL G IY G C L I Y++
Sbjct: 92 FFFLFNCMLISITTSYPKSLTEFFEITFDSVESATRAKEALHGADIYSGC-CTLKIDYAK 150
Query: 139 HTDLSIKVNNDRSRDYTLPS 158
T L++ N+ S DYT P+
Sbjct: 151 PTKLNVYKNDSESWDYTTPA 170
>gi|47208707|emb|CAF90432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 499
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 73 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132
+T DVL+ V + G V +I +F +NG +QA++++ V A AK AL G IY G C L
Sbjct: 136 LTQDVLYTVCNPVGNVLRIVIFKRNG-IQAMVEFESVHCAQKAKAALNGADIY-AGCCTL 193
Query: 133 HISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-----QPSILGQQP 173
I Y+R T L++ N++ S DYT P + + +ILG+ P
Sbjct: 194 KIEYARPTRLNVIKNDNESWDYTKPYLVRRDRGKGRQRQAILGEHP 239
>gi|302782656|ref|XP_002973101.1| hypothetical protein SELMODRAFT_99329 [Selaginella moellendorffii]
gi|300158854|gb|EFJ25475.1| hypothetical protein SELMODRAFT_99329 [Selaginella moellendorffii]
Length = 410
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 67/133 (50%), Gaps = 23/133 (17%)
Query: 56 EPE------SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
EPE S VLLA I N Y + +D+LH VFS G ++KI +F K +QA I +
Sbjct: 67 EPENPKVEASRVLLAIIHNPLYQMNVDILHQVFSPHGNIEKIVIFHKAAAVQAFIVFDSD 126
Query: 110 QTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLS-------IKVNNDRSRDYTLPSTP-- 160
+ A AK AL+G I+DG CKL I +S +K+N RDYT S P
Sbjct: 127 EAAAAAKSALQGRQIFDGC-CKLDIKFSIFAFRFLGNYKEPVKMN----RDYTNNSLPGD 181
Query: 161 ---MVNSQPSILG 170
+ Q SILG
Sbjct: 182 SQSKTSPQASILG 194
>gi|156378504|ref|XP_001631182.1| predicted protein [Nematostella vectensis]
gi|156218218|gb|EDO39119.1| predicted protein [Nematostella vectensis]
Length = 513
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 43 SGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 102
S Q+S + + + +LL +I N QY VT D+LH +FS G VQ+I +F K+ GLQA
Sbjct: 123 SKQISRNVHVRSETQPNKILLITIINPQYVVTTDILHTIFSKQGMVQRIVIFRKS-GLQA 181
Query: 103 LIQ---YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 159
+++ + V+ A AKE L G IY G S L+++ N+ + DYT
Sbjct: 182 MVEESRFDCVEAARHAKETLNGADIYTGCNTLKIESQGYAQQLNVRKNDSETYDYTQDKG 241
Query: 160 P 160
P
Sbjct: 242 P 242
>gi|341890178|gb|EGT46113.1| hypothetical protein CAEBREN_06779 [Caenorhabditis brenneri]
Length = 601
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 121 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTIVQALVEFESMEVAKAAKHA 180
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST--PMVNSQPSILGQQPVPM 176
+ G IY G C L + +++ + + + RD+TLP P + + +++ +P
Sbjct: 181 MNGADIY-SGCCTLKVEFAKPDRVRVVRQDKDQRDFTLPDNEVPQDSGRKTLIPSRPDDH 239
Query: 177 ------VGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPP 212
+ Y+ +AP PP QP P GA PP
Sbjct: 240 YYDRRPYEEERDPYDRRDYAPQPPPQPHYGYPPR---GAGPP 278
>gi|313237439|emb|CBY12627.1| unnamed protein product [Oikopleura dioica]
Length = 873
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
D K P +VLL +I + Y +T +L + S GPV +I +F K +QA+I++ +
Sbjct: 691 DSKNPNPPGHVLLLTILDAMYPITTKLLERICSYAGPVLRIVIFRKK-SVQAMIEFDSIV 749
Query: 111 TAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
A AK AL G IY G C + + Y++ L++ N+D +RD+++
Sbjct: 750 GAQRAKAALNGVDIYRGC-CTIKVEYAKPQSLNVFKNDDNTRDFSV 794
>gi|358338430|dbj|GAA56814.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 873
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
ES VLL +I N QY +T+DV+H + S G V +I +F K +QA++++ + A AK
Sbjct: 445 ESRVLLFTIYNAQYPITVDVIHQITSRHGRVLRIVIFRKT-HVQAMVEFKNTDDARNAKR 503
Query: 118 ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT---LPSTP 160
L G IY G C L I ++R L++ N+ + DY LP+ P
Sbjct: 504 NLNGADIYS-GCCTLKIEFARPARLTVLKNDQETWDYENSLLPTDP 548
>gi|146197853|dbj|BAF57638.1| hnRNP L protein [Dugesia japonica]
Length = 543
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 33 LPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 92
L + +ID +S G+ + + VL I N Y++T+DVL+ + S +G V +I
Sbjct: 56 LSFSQQSIDEFKSISKPNFGRNI---TKVLHFLITNAVYSITVDVLNKICSPYGKVARIY 112
Query: 93 MFDKN---GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNND 149
+ KN ++ALI++ A + KE L+G+ IY G C L +SYS+ + ++ N+
Sbjct: 113 IGKKNDQDNSIEALIEFSTDNDAKIVKENLDGNDIYSGC-CSLKLSYSKIHKIHVEKNDS 171
Query: 150 RSRDYTL-PSTPMV 162
S DYTL P T ++
Sbjct: 172 ESFDYTLVPKTGLL 185
>gi|71983992|ref|NP_495411.2| Protein C44B7.2, isoform a [Caenorhabditis elegans]
gi|351065573|emb|CCD61555.1| Protein C44B7.2, isoform a [Caenorhabditis elegans]
Length = 597
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 120 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHA 179
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 159
+ G IY G C L + +++ + ++ + RD+TLP
Sbjct: 180 MNGADIY-SGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDN 219
>gi|324504296|gb|ADY41855.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 626
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 55 LEPE--SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 112
LE E ++VL+ +I N QY VT+DV+H + G V++IAM + LQAL+++ A
Sbjct: 107 LESEHPNHVLILTIYNAQYPVTVDVIHQICEPHGFVKRIAMI-RRTMLQALVEFESADVA 165
Query: 113 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 166 KKAKHAMNGADIY-SGCCTLKVEFAKPDHVKVTRNDQDQWDYT 207
>gi|324503755|gb|ADY41626.1| Heterogeneous nuclear ribonucleoprotein L, partial [Ascaris suum]
Length = 614
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 55 LEPE--SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 112
LE E ++VL+ +I N QY VT+DV+H + G V++IAM + LQAL+++ A
Sbjct: 107 LESEHPNHVLILTIYNAQYPVTVDVIHQICEPHGFVKRIAMI-RRTMLQALVEFESADVA 165
Query: 113 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 166 KKAKHAMNGADIY-SGCCTLKVEFAKPDHVKVTRNDQDQWDYT 207
>gi|431909696|gb|ELK12854.1| Heterogeneous nuclear ribonucleoprotein L [Pteropus alecto]
Length = 629
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 93/221 (42%), Gaps = 60/221 (27%)
Query: 32 YLPVAPSAIDASGQLSVGLDGKKLEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQ 89
Y+ P+ ++ S + G + S +VLL +I N Y++T DVL+ + + GPVQ
Sbjct: 160 YIAGHPAFVNYSTSQKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQ 219
Query: 90 KIAMFDKNGGLQALIQYP------------------------------------DVQTAV 113
+I +F KN G+QA+++YP V V
Sbjct: 220 RIVIFRKN-GVQAMVEYPLLGNGFLAAGALKAGRGATLSTSVYTGCLPCAKCLHSVMGEV 278
Query: 114 V-------AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS-----TPM 161
V AK +L G IY G C L I Y++ T L++ N+ + DYT P+ P
Sbjct: 279 VSKPSAQRAKASLNGADIYS-GCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQGDPG 337
Query: 162 VN-----SQPSILGQQPVPMV---GATANQYNGAQFAPPPP 194
N QP +LG P G + Y+ + PPPP
Sbjct: 338 SNPNKRQRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPP 378
>gi|7497376|pir||T15805 hypothetical protein C44B7.2 - Caenorhabditis elegans
Length = 493
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 123 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHA 182
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 159
+ G IY G C L + +++ + ++ + RD+TLP
Sbjct: 183 MNGADIY-SGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDN 222
>gi|47209150|emb|CAF89890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 569
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPY--LPVAPSAIDASGQLSVGLDGKK-LEPESNVLLA 64
I YS H +L ++ + TN L +A SG ++ G DG+ + +S VL
Sbjct: 77 IQYSTHREL-------KTDNLTNQRAALQAISTASMHSGSMAAGGDGRGGVHAQSPVLRI 129
Query: 65 SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 122
+EN+ Y V+L+VL +FS FG V KI F +N QAL+Q+ D A AK H
Sbjct: 130 IVENLFYPVSLEVLQQIFSKFGSVLKIITFTRNNQFQALLQFSDAVHAQHAKAVSHTH 187
>gi|410931471|ref|XP_003979119.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Takifugu rubripes]
Length = 182
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T DVL+ V + G V +I +F +N G+QA++++ V A AK A
Sbjct: 105 NKVLLLSIQNPLYPITTDVLYTVCNPIGNVLRIVIFKRN-GIQAMVEFESVHCAQKAKAA 163
Query: 119 LEGHCIYDGGFCKLHISYSR 138
L G IY G C L I Y+R
Sbjct: 164 LNGADIY-AGCCTLKIEYAR 182
>gi|170582502|ref|XP_001896158.1| hypothetical protein [Brugia malayi]
gi|158596691|gb|EDP34993.1| conserved hypothetical protein [Brugia malayi]
Length = 643
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 55 LEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 112
LE E+ +VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ + A
Sbjct: 532 LESETPNHVLILTIYNAQYPINVDVIHQICELHGFVRRIAMI-RRTMLQALVEFESAEIA 590
Query: 113 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 591 KKAKHAMNGADIY-SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 632
>gi|386768315|ref|NP_725913.2| smooth, isoform P [Drosophila melanogaster]
gi|383302600|gb|AAM68420.2| smooth, isoform P [Drosophila melanogaster]
Length = 434
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 76 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
DVLH + G V +I +F KNG +QA++++ ++ A A+E L G IY G C L I
Sbjct: 51 DVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY-AGCCTLKID 108
Query: 136 YSRHTDLSIKVNN-DRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPP 194
Y++ L++ N D S DYTL ST + +P +LG GA F PP
Sbjct: 109 YAKPEKLNVYKNEPDTSWDYTL-STGEILPKPPLLGP--------------GAAF--PPF 151
Query: 195 EQPMMHQPTAAGW 207
P H T W
Sbjct: 152 GAPEYHTTTPENW 164
>gi|268530642|ref|XP_002630447.1| Hypothetical protein CBG11180 [Caenorhabditis briggsae]
Length = 604
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL+ ++ N Y + DV+H + S+ G V ++A+ K +QAL+++ V+ A AK A
Sbjct: 122 NKVLVVTVLNATYPIDADVIHTISSSQGKVLRVAVMHKPTVVQALVEFESVEVAKAAKHA 181
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
+ G IY G C L + +++ + + + RD+TL
Sbjct: 182 MNGADIY-AGCCTLKVEFAKPDRVRVTRQDKDQRDFTL 218
>gi|290975622|ref|XP_002670541.1| predicted protein [Naegleria gruberi]
gi|284084101|gb|EFC37797.1| predicted protein [Naegleria gruberi]
Length = 918
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
+ + Y + +D+L +FS FG ++KI +F KN Q+L+Q+ A A + +E
Sbjct: 340 ITFTHCDEYNYPLNVDLLFNLFSKFGTIEKINIFIKNELTQSLVQFKSDTEATEAVKEME 399
Query: 121 GHCIY-DGGFCKLHISYSRHT--DLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMV 177
G +Y + +++I +S+ + +L IK N R+RDY + PM Q+P
Sbjct: 400 GVFVYPEMKLYRMNIQFSKKSREELLIKETNHRNRDYVV--HPM-------RSQKPYDGS 450
Query: 178 GATANQYNGA----QFAPPPPE 195
G++ N +APPP +
Sbjct: 451 GSSMRYNNNTPSNNHYAPPPED 472
>gi|358332176|dbj|GAA36554.2| polypyrimidine tract-binding protein 1 [Clonorchis sinensis]
Length = 543
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 15 DLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAV 73
++ ++F +H + T + + +A+ + L G + ++VL I+N M +
Sbjct: 76 NIILQFSTHTHLELTTENNAIENAVKNANRIVQQDLSGVQAGAPNSVLRIVIDNIMGQQI 135
Query: 74 TLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133
+L+ +F FG + ++ +F ++ Q ++++ + A VA L G IY G C L
Sbjct: 136 NHVILYKIFHRFGKILRVLIFLRSNQYQCMLEFQNHIQAFVAMLHLNGQNIYTGC-CSLR 194
Query: 134 ISYSRHTD-LSIKVNNDRSRDYTLPSTPM----VNSQPSILGQQPVPMVGATANQYNGAQ 188
+ +SR L ++ ND+ RDYT+ +P+ +NS P PV + ATAN
Sbjct: 195 VEFSRTRGPLEVRRENDKCRDYTV--SPLLEDELNSPPP--ANVPVNQLAATAN------ 244
Query: 189 FAPPPPEQ------PMMHQPTAAGWGAVPPASQ 215
F P Q PM + P GAVP ++
Sbjct: 245 FQPNMIGQNLAVVNPMTNIPGMGTAGAVPGITE 277
>gi|302789994|ref|XP_002976765.1| hypothetical protein SELMODRAFT_443293 [Selaginella moellendorffii]
gi|300155803|gb|EFJ22434.1| hypothetical protein SELMODRAFT_443293 [Selaginella moellendorffii]
Length = 451
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
S VLLA I N Y + +D+LH VFS G ++KI +F K +QA I + + A AK A
Sbjct: 139 SRVLLAIIHNPLYQMNVDILHQVFSPHGNIEKIVIFHK-AAVQAFIVFESDEAAAAAKSA 197
Query: 119 LEGHCIYDGGFCKLHISYS 137
L+G I+DG CKL I +S
Sbjct: 198 LQGRQIFDGC-CKLDIKFS 215
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 74/181 (40%), Gaps = 40/181 (22%)
Query: 7 RITYSAHTDLSVKFQSHRSRDYTNPYLP------VAPSA----------------IDASG 44
R + L +KF S DYTN LP +P A + SG
Sbjct: 201 RQIFDGCCKLDIKF----SMDYTNNSLPGDSQSKTSPQASILGAGTAFSTMKQGSVPLSG 256
Query: 45 QLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 104
L G+ G + LL S N+ + L +FS +G V +I MF+ QAL+
Sbjct: 257 VLPFGVTGSN---DKCTLLVS--NLHERTDEEKLFNLFSGYGRVLRIKMFE--NAKQALV 309
Query: 105 QYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
Q D A +A L+G + + IS+S+H + + R+RD+T+ NS
Sbjct: 310 QLADGIQAELALNFLKGAPLLGSA---MEISFSKHN----TIRHPRTRDFTMDPYNRFNS 362
Query: 165 Q 165
+
Sbjct: 363 E 363
>gi|17532395|ref|NP_495412.1| Protein C44B7.2, isoform b [Caenorhabditis elegans]
gi|351065574|emb|CCD61556.1| Protein C44B7.2, isoform b [Caenorhabditis elegans]
Length = 339
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL+ ++ N QY + DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 120 NKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHA 179
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPST 159
+ G IY G C L + +++ + ++ + RD+TLP
Sbjct: 180 MNGADIY-SGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDN 219
>gi|74193172|dbj|BAE20599.1| unnamed protein product [Mus musculus]
gi|74193487|dbj|BAE20681.1| unnamed protein product [Mus musculus]
gi|74193495|dbj|BAE20685.1| unnamed protein product [Mus musculus]
Length = 241
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 59
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 227
>gi|149025820|gb|EDL82063.1| polypyrimidine tract binding protein 2, isoform CRA_c [Rattus
norvegicus]
Length = 243
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 6 LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEP------ES 59
+ I YS H +L ++ + N V A+ A + L G + +S
Sbjct: 126 IYIQYSNHKEL-------KTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQS 178
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 179 PVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 227
>gi|402594034|gb|EJW87961.1| hypothetical protein WUBG_01127 [Wuchereria bancrofti]
Length = 608
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 55 LEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 112
LE E+ +VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ + A
Sbjct: 117 LESETPNHVLILTIYNAQYPINVDVIHQICELHGFVRRIAMI-RRTMLQALVEFESAEIA 175
Query: 113 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 176 KKAKHAMNGADIY-SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 217
>gi|393907053|gb|EJD74501.1| serologically defined colon cancer antigen 1 [Loa loa]
Length = 1568
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + E ++VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ +
Sbjct: 1044 GLESESPNHVLILTIYNAQYPINVDVIHQICELHGFVKRIAMIRRT-MLQALVEFESAEI 1102
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
A AK A+ G IY G C L + +++ + + N++ DYT
Sbjct: 1103 AKKAKHAMNGADIYS-GCCTLKVEFAKPEHVKVTRNDNDQWDYT 1145
>gi|170576159|ref|XP_001893522.1| RNA binding protein [Brugia malayi]
gi|158600425|gb|EDP37644.1| RNA binding protein, putative [Brugia malayi]
Length = 659
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 55 LEPES--NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 112
LE E+ +VL+ +I N QY + +DV+H + G V++IAM + LQAL+++ + A
Sbjct: 117 LESETPNHVLILTIYNAQYPINVDVIHQICELHGFVRRIAMI-RRTMLQALVEFESAEIA 175
Query: 113 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
AK A+ G IY G C L + +++ + + N+ DYT
Sbjct: 176 KKAKHAMNGADIY-SGCCTLKVEFAKPEHVKVTRNDSDQWDYT 217
>gi|298707512|emb|CBJ30114.1| human PTB (hnRNP) homolog family member (ptb-1) [Ectocarpus
siliculosus]
Length = 921
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL 119
NVLL + ++ + VT+ L +FS FG V KI MFDK G QAL+Q +V TA+ A EA
Sbjct: 87 NVLLVRVTDIVHPVTILALQQIFSRFGKVDKIVMFDKGSGSQALVQMANVHTAMSAHEAA 146
Query: 120 E 120
+
Sbjct: 147 D 147
>gi|296489304|tpg|DAA31417.1| TPA: polypyrimidine tract binding protein 2-like [Bos taurus]
Length = 496
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 196
>gi|158519869|ref|NP_001103551.1| polypyrimidine tract-binding protein 2 [Bos taurus]
gi|158455056|gb|AAI22581.1| PTBP2 protein [Bos taurus]
Length = 255
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 177 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 227
>gi|344255742|gb|EGW11846.1| Polypyrimidine tract-binding protein 2 [Cricetulus griseus]
Length = 212
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPD 108
+S VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+QY D
Sbjct: 146 QSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGD 196
>gi|145478107|ref|XP_001425076.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392144|emb|CAK57678.1| unnamed protein product [Paramecium tetraurelia]
Length = 361
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 56 EPESNVLLASIENMQYAVTLD--VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 113
+P + +LL + ++ + TL+ +H F+ FG + KI +F+K +A +++ ++ +A+
Sbjct: 7 DPPNKILLLILNSLPSSFTLNNQFIHQKFNQFGDINKILIFEKGKTTKAFVEFHELNSAI 66
Query: 114 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQP 173
AK+ L G C GG +H S ++ +L I V+N R DYT S+ NS + +
Sbjct: 67 QAKKQLNG-CNIQGGKMNIHFSRLKNLNLEI-VDNSRGTDYTQASSNSQNSDSMLNSRTE 124
Query: 174 VPMVGATANQYNGAQ-----FAPPPPEQPMMHQPTAAGWGAVPPASQSMPM 219
+ N + Q +P EQ ++ G + Q+MP+
Sbjct: 125 ENIQFDLTNHISSTQSPRANSSPIRNEQINRLLESSDGEDDLKIWKQTMPL 175
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 50 LDGKKLEPESNVLLA-------SIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQA 102
LD ++ PE LL I N +T +++ VFS FG +++I +++K+ +A
Sbjct: 175 LDIEEFHPEIQKLLQQRQSRLLKILNFDSKITAKMIYNVFSKFGNLEEI-LYEKSSS-RA 232
Query: 103 LIQYPDVQTAVVAKEALEGHCIYDG 127
I+Y V A++AKE L +D
Sbjct: 233 YIKYQSVNQAIIAKEYLNNIQFFDS 257
>gi|324510343|gb|ADY44324.1| Heterogeneous nuclear ribonucleoprotein L [Ascaris suum]
Length = 400
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + E S VL+ ++ N+ + ++V+ + + +G V++IAM + G+QAL+++ D+Q
Sbjct: 19 GLETEHASRVLILTVYNVCQPIDINVIFQICAPYGVVKRIAMLHR-FGVQALVEFDDMQM 77
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
A AK + G IY G C L + +++ +++ N DYT TP
Sbjct: 78 AKNAKRGINGADIYHGC-CTLKVEFAKPDHVNVTANTSMQWDYTTGLTP 125
>gi|148700268|gb|EDL32215.1| mCG50057 [Mus musculus]
Length = 253
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + +S L +EN+ Y VTLD++H +FS FG V KI F KN QAL+QY D +
Sbjct: 184 GMAMAGQSPALRIIVENLFYPVTLDMVHQIFSKFGTVLKIITFTKNNQFQALLQYADPVS 243
Query: 112 AVVAKEALEG 121
A AK +L+G
Sbjct: 244 AQHAKLSLDG 253
>gi|256076161|ref|XP_002574382.1| polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 463
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 16 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 74
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 157 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 216
Query: 75 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 217 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGC-CSLQV 275
Query: 135 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 193
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 276 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 333
Query: 194 PEQPMMHQPTAAGWGAVPPASQS 216
+ + PTAA + AVP A+ S
Sbjct: 334 GQNIPLGNPTAA-FTAVPQAAAS 355
>gi|350644874|emb|CCD60410.1| polypyrimidine tract binding protein, putative [Schistosoma
mansoni]
Length = 427
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 16 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 74
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 121 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 180
Query: 75 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 181 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGC-CSLQV 239
Query: 135 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 193
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 240 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 297
Query: 194 PEQPMMHQPTAAGWGAVPPASQS 216
+ + PTAA + AVP A+ S
Sbjct: 298 GQNIPLGNPTAA-FTAVPQAAAS 319
>gi|324504331|gb|ADY41870.1| Heterogeneous nuclear ribonucleoprotein L [Ascaris suum]
Length = 536
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQT 111
G + E S VL+ ++ N+ + ++V+ + + +G V++IAM + G+QAL+++ D+Q
Sbjct: 153 GLETEHASRVLILTVYNVCQPIDINVIFQICAPYGVVKRIAMLHR-FGVQALVEFDDMQM 211
Query: 112 AVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
A AK + G IY G C L + +++ +++ N DYT TP
Sbjct: 212 AKNAKRGINGADIYHGC-CTLKVEFAKPDHVNVTANTSMQWDYTTGLTP 259
>gi|350644875|emb|CCD60411.1| polypyrimidine tract binding protein, putative [Schistosoma
mansoni]
Length = 592
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 16 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 74
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 121 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 180
Query: 75 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 181 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGC-CSLQV 239
Query: 135 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 193
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 240 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 297
Query: 194 PEQPMMHQPTAAGWGAVPPASQS 216
+ + PTAA + AVP A+ S
Sbjct: 298 GQNIPLGNPTAA-FTAVPQAAAS 319
>gi|256076159|ref|XP_002574381.1| polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 639
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 16 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 74
L +F +H + + + + +A+ + L G + + VL I+N M +
Sbjct: 157 LIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQIN 216
Query: 75 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134
+L+ +F FG + ++ +F +N + L+++ + A VA L G IY G C L +
Sbjct: 217 HVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGC-CSLQV 275
Query: 135 SYSRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP 193
+ + L ++ ND+ RDYT+ +P+ + + + L P + +T N + P
Sbjct: 276 EFWKARGPLEVRRENDKCRDYTI--SPLTDDELNSLQALPGGVTASTNNSTINSISQPSI 333
Query: 194 PEQPMMHQPTAAGWGAVPPASQS 216
+ + PTAA + AVP A+ S
Sbjct: 334 GQNIPLGNPTAA-FTAVPQAAAS 355
>gi|226487296|emb|CAX75513.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 571
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
+L+ +F FG + ++ +F +N + L+++ D A VA L G IY G C L + +
Sbjct: 151 ILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIYTGC-CSLQVEF 209
Query: 137 SRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPE 195
+ L ++ ND+ RDYT+ +P+ ++ + L P + +T N P +
Sbjct: 210 WKARGPLEVRRENDKCRDYTV--SPLTEAELNSLQALPSGVTASTNNSTINTIPQPTIGQ 267
Query: 196 QPMMHQPTAAGWGAVPPASQS 216
+ PT A + A+P AS S
Sbjct: 268 NISLGNPTTA-FTAIPQASAS 287
>gi|226487300|emb|CAX75515.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
gi|226487302|emb|CAX75516.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 603
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
+L+ +F FG + ++ +F +N + L+++ D A VA L G IY G C L + +
Sbjct: 183 ILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIYTGC-CSLQVEF 241
Query: 137 SRHTD-LSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPE 195
+ L ++ ND+ RDYT+ +P+ ++ + L P + +T N P +
Sbjct: 242 WKARGPLEVRRENDKCRDYTV--SPLTEAELNSLQALPSGVSASTNNSTINTIPQPTIGQ 299
Query: 196 QPMMHQPTAAGWGAVPPASQS 216
+ PT A + A+P AS S
Sbjct: 300 NISLGNPTTA-FTAIPQASAS 319
>gi|403370184|gb|EJY84954.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 734
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VLL SI N++Y V DVL +F +G Q+I +F + G QAL+++ + A K
Sbjct: 418 DSKVLLVSITNIKYPVNADVLFTIFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKL 477
Query: 118 ALEGHCIYDGGFCK----LHISYSRHTDLSIKVNNDRSRDYT 155
L+G +Y G + + I +S L I ++RD+T
Sbjct: 478 LLDGQGMY--GVSQPANVMKIQFSELQKLEINTQTLKARDFT 517
>gi|414872529|tpg|DAA51086.1| TPA: hypothetical protein ZEAMMB73_223567 [Zea mays]
Length = 357
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 79 HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133
+VFSAFG V KIA F+K LQALIQY D TA A+E+L+G I G LH
Sbjct: 270 RLVFSAFGYVHKIATFEK---LQALIQYTDAATASAARESLDGRSIPSGNLLMLH 321
>gi|82794317|ref|XP_728389.1| neural polypyrimidine tract binding protein [Plasmodium yoelii
yoelii 17XNL]
gi|23484718|gb|EAA19954.1| neural polypyrimidine tract binding protein [Plasmodium yoelii
yoelii]
Length = 387
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 69 MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL-QALIQYPDVQTAVVAKEALEGHCIYDG 127
MQY V +++++ +FS G V+KI K + QAL+Q ++ A A + L IYDG
Sbjct: 1 MQYPVDIELIYYLFSKCGIVEKIITISKKTSIFQALVQLESIEVAKEAIKTLHNRNIYDG 60
Query: 128 GFCK-LHISYSRHTDLSIKVNNDRSRDYTLPSTPMVN 163
C L I YS +L IK NN ++ DYT+ S P N
Sbjct: 61 --CNTLQIQYSFLKELIIKNNNSQAWDYTI-SNPQKN 94
>gi|403358967|gb|EJY79143.1| Polypyrimidine tract binding protein, putative [Oxytricha
trifallax]
Length = 479
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+S VLL SI N++Y V DVL +F +G Q+I +F + G QAL+++ + A K
Sbjct: 163 DSKVLLVSITNIKYPVNADVLFTIFQKYGDPQRIVIFPRQQGEQALVEFQTFEQAKKVKL 222
Query: 118 ALEGHCIYDGGFCK----LHISYSRHTDLSIKVNNDRSRDYT 155
L+G +Y G + + I +S L I ++RD+T
Sbjct: 223 LLDGQGMY--GVSQPANVMKIQFSELQKLEINTQTLKARDFT 262
>gi|146197802|dbj|BAF57617.1| hnRNP L protein [Dugesia japonica]
Length = 537
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 69 MQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEALEGHCIYD 126
+Y +T+D++ + FG + KI + KN ++ L+++ + A AKEAL G IY
Sbjct: 2 FKYPITVDIIKQICLKFGKLLKIFIGKKNQDNVVECLVEFEKISEAKAAKEALHGEDIYS 61
Query: 127 GGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
G C L + YS+ +++ + N+D S D++
Sbjct: 62 GC-CSLDVKYSKMSNVPVFKNDDESWDFS 89
>gi|145496290|ref|XP_001434136.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401259|emb|CAK66739.1| unnamed protein product [Paramecium tetraurelia]
Length = 358
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 73 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132
+T + LH F+ FG ++KI +F++ +A ++Y ++++A+ A++ L G I GG K+
Sbjct: 26 LTNEFLHKKFNEFGDIKKILIFERGKTNKAFVEYHNLKSAISARKQLNGLNI-QGG--KM 82
Query: 133 HISYSRHTDLSIK-VNNDRSRDYTLPSTPMVNSQPSIL 169
I YSR +L+++ V+N R DYT S+ NS SIL
Sbjct: 83 IIHYSRLKNLNLEIVDNSRGTDYTQASSNSQNS-DSIL 119
>gi|195151588|ref|XP_002016721.1| GL11732 [Drosophila persimilis]
gi|194110568|gb|EDW32611.1| GL11732 [Drosophila persimilis]
Length = 102
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 76 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
DVLH + G V +I +F KNG +QA++++ ++ A A+E L G IY G C L I
Sbjct: 1 DVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY-AGCCTLKID 58
Query: 136 YSRHTDLSIKVNN-DRSRDYTLPSTPMV 162
Y++ L++ N D S DYTL + ++
Sbjct: 59 YAKPEKLNVYKNEPDTSWDYTLSTGEIL 86
>gi|194755561|ref|XP_001960052.1| GF13175 [Drosophila ananassae]
gi|190621350|gb|EDV36874.1| GF13175 [Drosophila ananassae]
Length = 97
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 76 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135
DVLH + G V +I +F KNG +QA++++ ++ A A+E L G IY G C L I
Sbjct: 1 DVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY-AGCCTLKID 58
Query: 136 YSRHTDLSIKVNN-DRSRDYTLPSTPMV 162
Y++ L++ N D S DYTL + ++
Sbjct: 59 YAKPEKLNVYKNEPDTSWDYTLSTGEIL 86
>gi|375073695|gb|AFA34406.1| polypirimidine tract binding 2 protein, partial [Ostrea edulis]
Length = 142
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
+E++ Y V ++VL+ +FS FG V K+ +F KN QALIQ D A AK +L+G IY
Sbjct: 79 VEHLVYPVGIEVLYQIFSKFGKVLKMIIFTKNNSFQALIQMSDPVAANAAKLSLDGQNIY 138
Query: 126 DG 127
+G
Sbjct: 139 NG 140
>gi|301777342|ref|XP_002924098.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like, partial
[Ailuropoda melanoleuca]
Length = 281
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 14/99 (14%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VLL SI+N Y +T+DVL+ V + G VQ++ MF+ V A AK A
Sbjct: 192 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQQL-MFE------------SVLCAQKAKAA 238
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L G IY G C L I Y+R T L++ N++ S DYT P
Sbjct: 239 LNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYTKP 276
>gi|47218405|emb|CAG12676.1| unnamed protein product [Tetraodon nigroviridis]
Length = 582
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 83/207 (40%), Gaps = 52/207 (25%)
Query: 8 ITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIE 67
I YS H +L + R++ A SA+ + G S + S VL I+
Sbjct: 140 IQYSNHKELKTDAGNQRTQAVLQ-----AVSAVQSGGSPSSDVQEALAAASSPVLRIIID 194
Query: 68 NMQYAVTLDVLHMVF-------SAFGPVQKIAMFDKNGGL-------------------- 100
NM Y VTLDVL V S V K +F +
Sbjct: 195 NMFYPVTLDVLQQVAFPHPLPPSVGRSVSKSGLFLGSSDFLQVRHSHEDNHLHQEQSVPG 254
Query: 101 QALIQYPDVQTA----------VVAK---------EALEGHCIYDGGFCKLHISYSRHTD 141
+ +Q P + A V+A +AL+G IY+ C L I +S+ +
Sbjct: 255 SSAVQRPRQRAAGQTGKALPPGVLAACSGLTFIHLQALDGQNIYNS-CCTLRIDFSKLVN 313
Query: 142 LSIKVNNDRSRDYTLPSTPMVNSQPSI 168
L++K NND+SRDYT P P + QPS+
Sbjct: 314 LNVKYNNDKSRDYTRPELPAGDGQPSL 340
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 74/172 (43%), Gaps = 36/172 (20%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA-------PSAIDASGQLSVGLDGK--- 53
CTLRI +S +L+VK+ + +SRDYT P LP P+ A + S L GK
Sbjct: 302 CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDPAVAAAFSKDSNSLLGKIPG 361
Query: 54 KLEPES---------------------NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA 92
L P S VLL S N + VT L +F +G VQ++
Sbjct: 362 ALTPLSAAAAAAAAAGRVALAGQAGSGGVLLVSNLNEEM-VTPQSLFTLFGVYGDVQRVK 420
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
+ N ALIQ D A +A L G +Y + ++ S+H +++
Sbjct: 421 IL-YNKKDSALIQMSDANQAQLAMSHLNGQKMYGK---IIRVTLSKHQSVAL 468
>gi|90075792|dbj|BAE87576.1| unnamed protein product [Macaca fascicularis]
Length = 226
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 30/45 (66%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQ 105
VL I+NM Y VTLDVLH +FS FG V KI F KN QAL+Q
Sbjct: 180 VLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQ 224
>gi|345330029|ref|XP_003431460.1| PREDICTED: regulator of differentiation 1-like [Ornithorhynchus
anatinus]
Length = 670
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 51 DGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQ 110
D L +S+VL +EN+ Y VTL+VL+ +F FG V KI F KN QAL+Q+ D
Sbjct: 170 DSGLLPGQSSVLRIIVENLFYPVTLEVLYQIFFKFGTVLKIITFTKNNQFQALLQFADPM 229
Query: 111 TAVVAK 116
A AK
Sbjct: 230 NAHYAK 235
>gi|145478423|ref|XP_001425234.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392303|emb|CAK57836.1| unnamed protein product [Paramecium tetraurelia]
Length = 358
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 73 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132
+T + LH F+ FG ++KI +F++ +A +++ ++++A+ A++ L G I GG K+
Sbjct: 26 LTNEYLHKKFNEFGDLKKILIFERGKTNKAFVEFHNLKSAIAARKQLNGLNI-QGG--KM 82
Query: 133 HISYSRHTDLSIK-VNNDRSRDYTLPSTPMVNSQPS 167
I YSR +L+++ V+N R DYT S+ NSQ S
Sbjct: 83 IIHYSRLKNLNLEIVDNSRGTDYTQASS---NSQNS 115
>gi|387219209|gb|AFJ69313.1| polypyrimidine tract binding protein [Nannochloropsis gaditana
CCMP526]
Length = 324
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 93 MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSR 152
MF+K G QAL+QYPDV +A A E + +Y + + YS H D+ ++ N DR+
Sbjct: 1 MFNKGAGNQALVQYPDVASAQAAFEQADHRNMYTDSNL-IRVGYSTHHDIKVRANTDRTW 59
Query: 153 DYTLPST 159
DYT T
Sbjct: 60 DYTKKKT 66
>gi|308502740|ref|XP_003113554.1| hypothetical protein CRE_26483 [Caenorhabditis remanei]
gi|308263513|gb|EFP07466.1| hypothetical protein CRE_26483 [Caenorhabditis remanei]
Length = 602
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+ VL+ ++ N QY V DV++ + +A G V ++A+ K +QAL+++ ++ A AK A
Sbjct: 122 NKVLVVTVLNAQYPVDADVIYQISNAQGRVLRVAVMHKPTIVQALVEFESMEIAKAAKHA 181
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNN-------DR---------SRDYTLPST 159
+ G IY G C L + +++ L +N+ DR RD+T+P
Sbjct: 182 MNGADIY-SGCCTLKVEFAKVCGLFFFLNHHCIRFQPDRVRVTRQDKDQRDFTIPEN 237
>gi|449687307|ref|XP_002155274.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Hydra
magnipapillata]
Length = 759
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
+N+LL +I N + V ++ + + VQ+I +F KN GLQAL+++ V A ++A
Sbjct: 235 TNILLFTIINAIHPVNVETVKKICLQHAEVQRIVIFHKN-GLQALVEFLSVDDAQRIQQA 293
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
L G C G C L I +S+ L++ N + D +
Sbjct: 294 LNG-CDIFAGCCTLKIDFSKTGRLNVHANTTETYDIEI 330
>gi|350034148|dbj|GAA34297.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 735
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAV 113
E ++ +LL I Y +T+DV+ + G V +I + KN ++AL++ + A
Sbjct: 141 EEQTKILLLDITAADYPITVDVIRSICQPHGKVLRIFIGKKNIDRSVEALVELDTSEDAR 200
Query: 114 VAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
KE ++G IY G C L ++YS+ + + + N+ S D++
Sbjct: 201 KVKEQIDGADIY-YGCCTLKVTYSKISRVHVTKNDSESWDFS 241
>gi|156368308|ref|XP_001627637.1| predicted protein [Nematostella vectensis]
gi|156214552|gb|EDO35537.1| predicted protein [Nematostella vectensis]
Length = 203
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
SN+LL +I N + + + +LH + S G V +I +F KN GLQAL +A A
Sbjct: 102 SNILLLTIINPLHPINVKILHKICSPSGKVLRIVIFHKN-GLQAL-------SAERALAV 153
Query: 119 LEGHCIYDGGFCKLHISYSRHT-DLSIKVNNDRSRDYT 155
L G IY G C L I YS+ L++ N+D + DYT
Sbjct: 154 LNGQDIY-AGCCTLKIDYSKKAKKLNVFKNDDETWDYT 190
>gi|123474487|ref|XP_001320426.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903231|gb|EAY08203.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 413
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
S V+ I +Q ++ + ++ S +G V+KI F+KNG AL+Q DV+ A +A
Sbjct: 105 SRVICLQILKLQISLGIYDIYDECSNYGTVEKIICFEKNGKF-ALVQMHDVKEAALALAN 163
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
L Y F ++ I YS + D+ I+ NN +S D+T P
Sbjct: 164 LSNSSRYLPNF-QIKIQYSHNQDIIIQFNNAKSFDFTHP 201
>gi|260784453|ref|XP_002587281.1| hypothetical protein BRAFLDRAFT_237696 [Branchiostoma floridae]
gi|229272423|gb|EEN43292.1| hypothetical protein BRAFLDRAFT_237696 [Branchiostoma floridae]
Length = 304
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
++L+G IY+ C L I YS+ L++K NND+SRDYT P P + QPS+
Sbjct: 4 QSLDGQNIYNAC-CTLRIDYSKLETLNVKYNNDKSRDYTRPELPAGDGQPSL 54
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 74/179 (41%), Gaps = 44/179 (24%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVA---PSAIDASG---------QLSV--- 48
CTLRI YS L+VK+ + +SRDYT P LP PS A G LS+
Sbjct: 16 CTLRIDYSKLETLNVKYNNDKSRDYTRPELPAGDGQPSLEQAMGLGTFDPGPPLLSLPSV 75
Query: 49 --GLDGK--------------------KLEPESNVLLASIENMQYAVTLDVLHMVFSAFG 86
GL G L+ +VLL S N + VT D L +F +G
Sbjct: 76 PGGLTGSIPLAGTIPNLSAASAAARLAGLQQAGSVLLVSNLNTEM-VTPDALFTLFGVYG 134
Query: 87 PVQKIA-MFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSI 144
V ++ +F K ALIQ + A A + L ++ + ++ S+H + +
Sbjct: 135 DVHRVKILFAKKD--NALIQMAEPHQANTAMQHLNNLRVWGK---NIRVTLSKHNQVQL 188
>gi|149025818|gb|EDL82061.1| polypyrimidine tract binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 322
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSI 168
+AL+G IY+ C L I +S+ +L++K NND+SRDYT P P + QP++
Sbjct: 27 QALDGQNIYNAC-CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPAL 77
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 41/171 (23%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLP------------VAPSAIDAS-----GQL 46
CTLRI +S +L+VK+ + +SRDYT P LP A A + S G L
Sbjct: 39 CTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGAL 98
Query: 47 S------------------VGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPV 88
S VG+ G + +L++++ + VT L +F +G V
Sbjct: 99 SPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLN--EEMVTPQSLFTLFGVYGDV 156
Query: 89 QKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139
Q++ + N ALIQ D + +A L G +Y + ++ S+H
Sbjct: 157 QRVKIL-YNKKDSALIQMADGNQSQLAMNHLNGQKMYGK---IIRVTLSKH 203
>gi|307189437|gb|EFN73847.1| Polypyrimidine tract-binding protein 2 [Camponotus floridanus]
Length = 352
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 4 CTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKL 55
CTLRI YS +L+VK+ + +SRDYTNP LP + +DA+ S+ L G+ L
Sbjct: 21 CTLRIDYSKMQNLNVKYNNDKSRDYTNPNLPTGDANLDAA---SLALGGELL 69
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 109 VQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTP 160
++ A ++L+G +Y+ C L I YS+ +L++K NND+SRDYT P+ P
Sbjct: 1 MKNARFLAQSLDGQNVYNSC-CTLRIDYSKMQNLNVKYNNDKSRDYTNPNLP 51
>gi|256080379|ref|XP_002576459.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 597
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ VQ A
Sbjct: 191 LSADNHILLFTIYDTDRPITVETIYRITFSYGSVLRIVIFRK-SQVQAMVEFGSVQEARN 249
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY-TLPSTPMVNSQ 165
AK L G I+ G C L + Y+R LS+ N+ + D+ P N Q
Sbjct: 250 AKLHLNGADIFPGC-CTLKVDYARPARLSVPRNDQDNWDFEKCERDPFCNFQ 300
>gi|350854988|emb|CAZ32696.2| heterogeneous nuclear ribonucleoprotein l (hnrnp l), putative
[Schistosoma mansoni]
Length = 522
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ VQ A
Sbjct: 116 LSADNHILLFTIYDTDRPITVETIYRITFSYGSVLRIVIFRK-SQVQAMVEFGSVQEARN 174
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY-TLPSTPMVNSQ 165
AK L G I+ G C L + Y+R LS+ N+ + D+ P N Q
Sbjct: 175 AKLHLNGADIFPGC-CTLKVDYARPARLSVPRNDQDNWDFEKCERDPFCNFQ 225
>gi|322798025|gb|EFZ19869.1| hypothetical protein SINV_08848 [Solenopsis invicta]
Length = 112
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA++++ V++A+ AKE
Sbjct: 54 NHVLLYTIMNPIYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVKFDTVKSAIRAKET 112
>gi|145536093|ref|XP_001453774.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421507|emb|CAK86377.1| unnamed protein product [Paramecium tetraurelia]
Length = 386
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 56 EPESNVLLASIENM--QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 113
+P S +LL I + + +T D L F +G V+KI +F++ +A ++Y +V+ A+
Sbjct: 5 DPPSKILLLIITYLPQSFPLTNDFLFETFKQYGEVKKILIFERGKTNKAFVEYNEVKHAI 64
Query: 114 VAKEALEGHCIY-DGGFCKLHISYSRHTDLSIKVNNDRSRDY------------------ 154
A+ + G + GG +H S + DL + V++ R +Y
Sbjct: 65 SARRNMIGKSLTPQGGRLLIHYSRLKQLDLEV-VDHTRGTEYCSDDEETQPEQKYPLKSM 123
Query: 155 TLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQ 188
TLP++ ++ P ++ Q + + NQ+ GAQ
Sbjct: 124 TLPNSIQIS--PPLIKPQSIEQISNNGNQFKGAQ 155
>gi|256077460|ref|XP_002575022.1| polypyrimidine tract binding protein [Schistosoma mansoni]
gi|360043943|emb|CCD81489.1| putative polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 597
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 59 SNVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+ VL ++N M + +LH +F +G + +I + KN L+++ + A VA
Sbjct: 140 TTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAML 199
Query: 118 ALEGHCIYDGGFCKLHISYSRHTD-LSIKVNNDRSRDY 154
L G IY G C L + +S++ L ++ +DR RDY
Sbjct: 200 HLNGQNIYT-GCCSLRVQFSKNRGPLEVRQESDRCRDY 236
>gi|145526162|ref|XP_001448892.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416458|emb|CAK81495.1| unnamed protein product [Paramecium tetraurelia]
Length = 362
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 56 EPESNVLLASIENMQ--YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 113
+P S +LL I + + + D+L F+ +G ++KI +F++ +A ++Y DV+ A+
Sbjct: 7 DPPSKILLLVITQLSPTFPLCNDLLFEQFAKYGDIKKILIFERGKANKAFVEYYDVKHAI 66
Query: 114 VAKEALEGHCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-------Q 165
A++ G + +G G +H S ++ DL + V+ R DYT S+ ++
Sbjct: 67 EARKDKLGKYLAEGEGKLTIHFSRLKNLDLEV-VDKSRGTDYTQASSTNSDTMKHSNTDD 125
Query: 166 PSILGQQ 172
P++L QQ
Sbjct: 126 PNVLRQQ 132
>gi|145511796|ref|XP_001441820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409081|emb|CAK74423.1| unnamed protein product [Paramecium tetraurelia]
Length = 363
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 15/129 (11%)
Query: 56 EPESNVLLASIENMQ--YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAV 113
+P S +LL I + + + D+L F +G ++KI +F++ +A ++Y D++ A+
Sbjct: 7 DPPSKILLLVITQLSPTFPLCNDLLFEQFGKYGDIKKILIFERGKANKAFVEYYDIKHAI 66
Query: 114 VAKEALEGHCIYDG-GFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS-------- 164
A++ G + +G G +H S ++ DL + V+ R DYT T + NS
Sbjct: 67 EARKDKIGKYLAEGEGKLTIHFSRLKNLDLEV-VDKSRGTDYT--QTSITNSDVVKHSNT 123
Query: 165 -QPSILGQQ 172
P+IL QQ
Sbjct: 124 DDPNILRQQ 132
>gi|226481683|emb|CAX73739.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ ++Q A
Sbjct: 116 LSTDNHILLFTIYDTDRPITVETIYRITFSYGNVLRIVIFRK-SQVQAMVEFGNIQEARK 174
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
AK L G I+ G C L + Y+R L++ N+ + D+
Sbjct: 175 AKLHLNGADIFPGC-CTLKVDYARPARLTVPRNDQDNWDF 213
>gi|226481681|emb|CAX73738.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 518
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ ++Q A
Sbjct: 116 LSTDNHILLFTIYDTDRPITVETIYRITFSYGNVLRIVIFRK-SQVQAMVEFGNIQEARK 174
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
AK L G I+ G C L + Y+R L++ N+ + D+
Sbjct: 175 AKLHLNGADIFPGC-CTLKVDYARPARLTVPRNDQDNWDF 213
>gi|226467722|emb|CAX69737.1| Heterogeneous nuclear ribonucleoprotein L [Schistosoma japonicum]
Length = 562
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
L ++++LL +I + +T++ ++ + ++G V +I +F K +QA++++ ++Q A
Sbjct: 116 LSTDNHILLFTIYDTDRPITVETIYRITFSYGNVLRIVIFRK-SQVQAMVEFGNIQEARK 174
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
AK L G I+ G C L + Y+R L++ N+ + D+
Sbjct: 175 AKLHLNGADIFPGC-CTLKVDYARPARLTVPRNDQDNWDF 213
>gi|145516865|ref|XP_001444321.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411732|emb|CAK76924.1| unnamed protein product [Paramecium tetraurelia]
Length = 362
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 76 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG-GFCKLHI 134
++L FS +G ++KI +F++ +A ++Y DV+ A+ A++ G + +G G +H
Sbjct: 29 ELLFEQFSKYGDIKKILIFERGKANKAFVEYYDVKHAIEARKDKLGKYLAEGEGKLTIHF 88
Query: 135 SYSRHTDLSIKVNNDRSRDYTLPSTPMVN-------SQPSILGQQ 172
S ++ DL + V+ R DYT S+ + P+IL QQ
Sbjct: 89 SRLKNLDLEV-VDKSRGTDYTQASSTNSDLMKHSNTDDPNILRQQ 132
>gi|226468144|emb|CAX76299.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 436
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 7 RITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASI 66
++T T L +++ H+ + + + + +A+ + L G + VL +
Sbjct: 103 QVTLRGRT-LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVV 161
Query: 67 EN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
+N M + +LH +F +G + +I + KN L+++ + A VA L G IY
Sbjct: 162 DNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIY 221
Query: 126 DGGFCKLHISYSRHTD-LSIKVNNDRSRDY 154
G C L + +S++ L ++ +++ RDY
Sbjct: 222 T-GCCSLRVQFSKNRGPLEVRQESEKCRDY 250
>gi|13435822|gb|AAH04763.1| Hnrpll protein, partial [Mus musculus]
Length = 340
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 21/154 (13%)
Query: 99 GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
G+QA++++ V A AK AL G IY G C L I Y+R T L++ N++ S DYT
Sbjct: 3 GIQAMVEFESVLCAQKAKAALNGADIY-AGCCTLKIEYARPTRLNVIRNDNDSWDYT--- 58
Query: 159 TPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGA--------- 209
P + + G+Q ++G + + + P P+ P+ G+
Sbjct: 59 KPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLLPL---PSRYRMGSRDTPELVAY 115
Query: 210 -VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHM 242
+P AS S G+ P GS+ M G+ Q+ M
Sbjct: 116 PLPQASSSYMHGGS----PSGSVVMVSGLHQLKM 145
>gi|123491774|ref|XP_001325911.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121908818|gb|EAY13688.1| hypothetical protein TVAG_371620 [Trichomonas vaginalis G3]
Length = 412
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 83 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 142
S FG V KI F+K+G AL+Q +Q A +A L ++ F KL I +S++ D+
Sbjct: 127 SLFGTVDKIICFEKSGKF-ALVQMHTIQDAGLALYNLSNCERHNPSF-KLRIQFSKNHDI 184
Query: 143 SIKVNNDRSRDYTLPSTPM 161
IK NN +S D+T PS +
Sbjct: 185 VIKFNNTKSFDFTQPSARL 203
>gi|395751132|ref|XP_002829227.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L isoform 2,
partial [Pongo abelii]
Length = 248
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 107
++VLL +I N Y++T DVL+ + + GPVQ+I +F KN G+QA+++YP
Sbjct: 192 NSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKN-GVQAMVEYP 239
>gi|145532711|ref|XP_001452111.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419788|emb|CAK84714.1| unnamed protein product [Paramecium tetraurelia]
Length = 651
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 57 PESNVLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVV 114
P +NV+L I N + TL D + VFS FG +Q++ +F+++ + I++ ++++A
Sbjct: 12 PNTNVILVVITN-KANKTLPHDKYYKVFSPFGTIQRMLIFERSLTWKTFIEFDNIESAFK 70
Query: 115 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLP 157
A+ + D +++ S+ T +S + NN DYT+P
Sbjct: 71 ARSQMNDKQFCDDTSLLMNVYASKLTYISFQENNVWGVDYTIP 113
>gi|226468142|emb|CAX76298.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 495
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 16 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 74
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 26 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 85
Query: 75 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 86 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 144
Query: 135 SYSRHTD-LSIKVNNDRSRDY 154
+S++ L ++ +++ RDY
Sbjct: 145 QFSKNRGPLEVRQESEKCRDY 165
>gi|76157758|gb|AAX28586.2| SJCHGC05650 protein [Schistosoma japonicum]
Length = 381
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 16 LSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESNVLLASIEN-MQYAVT 74
L +++ H+ + + + + +A+ + L G + VL ++N M +
Sbjct: 123 LVMQYSKHQHLELHSENTSIGNAIQNANCIVQQDLSGANSGMPTTVLRVVVDNIMGQQIN 182
Query: 75 LDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134
+LH +F +G + +I + KN L+++ + A VA L G IY G C L +
Sbjct: 183 HTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAMLHLNGQNIYT-GCCSLRV 241
Query: 135 SYSRHTD-LSIKVNNDRSRDY 154
+S++ L ++ +++ RDY
Sbjct: 242 QFSKNRGPLEVRQESEKCRDY 262
>gi|17508419|ref|NP_492508.1| Protein MEC-8 [Caenorhabditis elegans]
gi|1369981|emb|CAA64867.1| mec-8 [Caenorhabditis elegans]
gi|3877217|emb|CAB03111.1| Protein MEC-8 [Caenorhabditis elegans]
Length = 312
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A +L+G I
Sbjct: 232 VANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQIT 291
Query: 126 DGGFCKLHISYSRH 139
L I Y+R+
Sbjct: 292 ANDRGGLRIEYARN 305
>gi|1370048|emb|CAA64866.1| mec-8 [Caenorhabditis elegans]
Length = 312
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A +L+G I
Sbjct: 232 VANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQIT 291
Query: 126 DGGFCKLHISYSRH 139
L I Y+R+
Sbjct: 292 ANDRGGLRIEYARN 305
>gi|198417513|ref|XP_002121186.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein L
[Ciona intestinalis]
Length = 106
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 107
+ VLL ++ N Y +T DVLHM+ G VQ+I +F K G+QA+I+YP
Sbjct: 52 NKVLLFTVVNAVYPITTDVLHMICEPCGEVQRIVIFRKR-GVQAMIEYP 99
>gi|226472642|emb|CAX71007.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 59 SNVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+ VL ++N M + +LH +F +G + +I + KN L+++ + A VA
Sbjct: 166 TTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAML 225
Query: 118 ALEGHCIYDGGFCKLHISYSRHTD-LSIKVNNDRSRDY 154
L G IY G C L + +S++ L ++ +++ RDY
Sbjct: 226 HLNGQNIYT-GCCSLRVQFSKNRGPLEVRQESEKCRDY 262
>gi|226472640|emb|CAX71006.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 596
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 59 SNVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+ VL ++N M + +LH +F +G + +I + KN L+++ + A VA
Sbjct: 140 TTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAML 199
Query: 118 ALEGHCIYDGGFCKLHISYSRHTD-LSIKVNNDRSRDY 154
L G IY G C L + +S++ L ++ +++ RDY
Sbjct: 200 HLNGQNIYT-GCCSLRVQFSKNRGPLEVRQESEKCRDY 236
>gi|358256069|dbj|GAA57625.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 739
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 1 MGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPESN 60
+GP +R+ +S+ T + F S R + LP SG E +
Sbjct: 109 VGPNRVRLEFSSET---IPFSSSRQPEPKGTLLP--------SG-----------EEATC 146
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEA 118
+L + Y +T+DV+ + G + ++ + KN L+ L+++ + A AKE
Sbjct: 147 ILHLDVAAADYPITVDVIRSICEPHGKLVRVFIGKKNVDRSLEVLVEFESPKDAAKAKEH 206
Query: 119 LEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
L+G IY G C L ++S+ + + N+ S D++ P+
Sbjct: 207 LDGADIY-SGCCSLTATFSKVQKVHVTKNDSESWDFSGPN 245
>gi|226468148|emb|CAX76301.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 610
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 59 SNVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+ VL ++N M + +LH +F +G + +I + KN L+++ + A VA
Sbjct: 154 TTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAML 213
Query: 118 ALEGHCIYDGGFCKLHISYSRHTD-LSIKVNNDRSRDY 154
L G IY G C L + +S++ L ++ +++ RDY
Sbjct: 214 HLNGQNIYT-GCCSLRVQFSKNRGPLEVRQESEKCRDY 250
>gi|226468146|emb|CAX76300.1| Regulator of differentiation 1 [Schistosoma japonicum]
Length = 622
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 59 SNVLLASIEN-MQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE 117
+ VL ++N M + +LH +F +G + +I + KN L+++ + A VA
Sbjct: 166 TTVLRVVVDNIMGQQINHTILHKIFYRYGKILRIVTYLKNNQYHGLVEFGNHIHAFVAML 225
Query: 118 ALEGHCIYDGGFCKLHISYSRHTD-LSIKVNNDRSRDY 154
L G IY G C L + +S++ L ++ +++ RDY
Sbjct: 226 HLNGQNIYT-GCCSLRVQFSKNRGPLEVRQESEKCRDY 262
>gi|268564730|ref|XP_002639203.1| C. briggsae CBR-MEC-8 protein [Caenorhabditis briggsae]
Length = 305
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A AL+G +
Sbjct: 225 VANLSAEVNEDQLRGVFKAFTGFTRLRLHNKNGSCVAFVEYSDLQKATQAMLALQGFQVS 284
Query: 126 DGGFCKLHISYSRH 139
L I Y+R+
Sbjct: 285 ANDRGGLRIEYARN 298
>gi|154422945|ref|XP_001584484.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918731|gb|EAY23498.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 314
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 83 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 142
S FG VQKI F+K G AL+Q +V A + L Y F +L + YS++T++
Sbjct: 128 SHFGVVQKIICFEKKGKY-ALLQMENVDQAALVLANLSIPNRYAPSF-ELRVQYSKNTNI 185
Query: 143 SIKVNNDRSRDYTLP 157
I+ NN +S D+T+P
Sbjct: 186 VIQYNNSKSFDFTVP 200
>gi|125589639|gb|EAZ29989.1| hypothetical protein OsJ_14050 [Oryza sativa Japonica Group]
gi|218194466|gb|EEC76893.1| hypothetical protein OsI_15106 [Oryza sativa Indica Group]
Length = 201
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEA 118
VL + N+ Y VT D+LH VF A+G +KI ++ ++A +Q+ + A A++
Sbjct: 20 EQVLHVTASNLLYPVTKDLLHRVFYAYG-AKKICLYQMETRVEASVQFQSREDAEYARKT 78
Query: 119 LEGHCIYDG 127
GH IY G
Sbjct: 79 FHGHNIYHG 87
>gi|123500629|ref|XP_001327903.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121910839|gb|EAY15680.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 432
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 83 SAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDL 142
S FG V+KI F+K G AL+Q V+ A + L Y F +L + YS++ ++
Sbjct: 128 SHFGIVEKIICFEKQGKF-ALVQMQTVEQAALVLANLTIPNRYAPSF-ELRVQYSKNANI 185
Query: 143 SIKVNNDRSRDYTLP 157
I+ NN +S D+TLP
Sbjct: 186 VIQFNNSKSFDFTLP 200
>gi|341895190|gb|EGT51125.1| CBN-MEC-8 protein [Caenorhabditis brenneri]
gi|341898355|gb|EGT54290.1| hypothetical protein CAEBREN_29517 [Caenorhabditis brenneri]
Length = 313
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
+ N+ V D L VF AF ++ + +KNG A ++Y D+Q A A +L+G +
Sbjct: 233 VANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMMSLQGFQVS 292
Query: 126 DGGFCKLHISYSRH 139
L I Y+R+
Sbjct: 293 ANDRGGLRIEYARN 306
>gi|328792474|ref|XP_003251729.1| PREDICTED: hypothetical protein LOC100577881 [Apis mellifera]
Length = 120
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 107
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA+++YP
Sbjct: 43 NHVLLFTIINPVYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVEYP 90
>gi|145503200|ref|XP_001437577.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404728|emb|CAK70180.1| unnamed protein product [Paramecium tetraurelia]
Length = 601
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 59 SNVLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
+NV+L I N + TL D VFS FG +Q++ +F+++ + I++ + ++A+ A+
Sbjct: 6 TNVILVVITN-KANKTLGHDKYFKVFSQFGTIQRMLIFERSLTWKTFIEFDNPESAIKAR 64
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
+++ D +++ S+ T ++ + NN DYTL
Sbjct: 65 QSMNDKLFCDDAQLTMNVYASKLTYITFQENNTGGVDYTL 104
>gi|37806432|dbj|BAC99625.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125603374|gb|EAZ42699.1| hypothetical protein OsJ_27267 [Oryza sativa Japonica Group]
Length = 401
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 34 PVAPSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM 93
P A S++D S ++ + K ++VL ++ ++ Y VT +VL VFS +G +++ +
Sbjct: 58 PGATSSVD-SQKVFDEMPSNKEPTTASVLHVTMSHVLYPVTAEVLLQVFSPYG-AEEVRV 115
Query: 94 FDKNG-GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
+++ ++A I + Q A A+EAL G CIY+G C L + Y
Sbjct: 116 YNQGTIQVEAFILFRLCQDATRAREALHGCCIYNGC-CFLDVKY 158
>gi|405972821|gb|EKC37569.1| Heterogeneous nuclear ribonucleoprotein L [Crassostrea gigas]
Length = 186
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 103
+++LL ++ N QY +T+DV+H + +A+G VQ+I +F KN G+QA+
Sbjct: 118 NHILLFTVLNPQYPITVDVMHKICTAYGQVQRIVIFKKN-GVQAM 161
>gi|380011401|ref|XP_003689795.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Apis
florea]
Length = 100
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYP 107
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA+++YP
Sbjct: 43 NHVLLFTIINPVYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVEYP 90
>gi|218201133|gb|EEC83560.1| hypothetical protein OsI_29204 [Oryza sativa Indica Group]
Length = 260
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG-GLQALIQYPDVQTAVVAKE 117
++VL ++ ++ Y VT +VL VFS +G +++ ++++ ++A I + Q A A+E
Sbjct: 82 ASVLHVTMSHVLYPVTAEVLLQVFSPYGA-EEVRVYNQGTIQVEAFILFRLCQDATRARE 140
Query: 118 ALEGHCIYDGGFCKLHISY 136
AL G CIY+G C L + Y
Sbjct: 141 ALHGCCIYNGC-CFLDVKY 158
>gi|118384092|ref|XP_001025199.1| polypyrimidine tract-binding protein 1 (PTB) [Tetrahymena
thermophila]
gi|89306966|gb|EAS04954.1| polypyrimidine tract-binding protein 1 (PTB) [Tetrahymena
thermophila SB210]
Length = 1302
Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVA 115
P S +L+ E +T D L +FS +G V K+ +F K+ +A I+ V++A A
Sbjct: 404 PSSVLLVIVFELKDLQITNDQLQQIFSPYGFVNKVLIFQKSTDSTKAFIEMNSVESAKKA 463
Query: 116 KEALEGHCI--YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNS 164
KEAL I K + YS+ TDL++ +DY L S + NS
Sbjct: 464 KEALNRAKIPLLPNQKYKFKVHYSQTTDLNLCNYKTEGKDYRLSSNKITNS 514
>gi|149050610|gb|EDM02783.1| heterogeneous nuclear ribonucleoprotein L-like (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 410
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
+ +++++ + ++ + G + + + V A AK AL G IY G C L I Y
Sbjct: 51 MFYILYATLLEKYSVLLYSREMGYKQCLTFESVLCAQKAKAALNGADIY-AGCCTLKIEY 109
Query: 137 SRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPPPEQ 196
+R T L++ N++ S DYT P + + G+Q ++G + + + P
Sbjct: 110 ARPTRLNVIRNDNDSWDYT---KPYLGRRDRGKGRQRQAILGDHPSSFRHDGYGSHGPLL 166
Query: 197 PMMHQPTAAGWGA----------VPPASQSMPMMGNHPYMPPGSMPMGPGMMQMHM 242
P+ P+ G+ +P AS S G+ P GS+ M G+ Q+ M
Sbjct: 167 PL---PSRYRMGSRDTPELVAYPLPQASSSYMHGGS----PSGSVVMVSGLHQLKM 215
>gi|342183429|emb|CCC92909.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 320
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 59 SNVLLASIENMQY------AVTLDVLHMVFSAFGPVQKIAMFDKNGG-------LQALIQ 105
S LL S+ N QY ++T +++ +F +G VQKI + KN +QAL+Q
Sbjct: 170 SKTLLVSMFNTQYDVSAATSITPMIVYQIFCNYGAVQKIVVLPKNDSSQRNHNRVQALVQ 229
Query: 106 YPDVQTAVVAKEALEGHCIYDGGFC--KLHISYSRHTD-------LSIKVNND 149
+ QTA K L+G + G L I +SR + +S+ VN D
Sbjct: 230 FDSKQTAENVKNILQGQPVTIGETVTFTLDIQFSRMDNIKTSNPAISLVVNED 282
>gi|383856701|ref|XP_003703846.1| PREDICTED: uncharacterized protein LOC100878109 [Megachile
rotundata]
Length = 141
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTA 112
++VLL +I N Y +T++VLH + + G VQ+I +F KN G+QA+++YP TA
Sbjct: 43 NHVLLFTIINPVYPITVEVLHTISAPSGQVQRIVIFKKN-GVQAMVEYPLQCTA 95
>gi|308494202|ref|XP_003109290.1| CRE-MEC-8 protein [Caenorhabditis remanei]
gi|308246703|gb|EFO90655.1| CRE-MEC-8 protein [Caenorhabditis remanei]
Length = 305
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
+ N+ V D L VF AF ++ + +KNG A ++Y D+ A A +L+G +
Sbjct: 225 VANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLHKATQAMMSLQGFQVS 284
Query: 126 DGGFCKLHISYSRH 139
L I Y+R+
Sbjct: 285 ANDRGGLRIEYARN 298
>gi|256077594|ref|XP_002575087.1| polypyrimidine tract binding protein [Schistosoma mansoni]
gi|360045192|emb|CCD82740.1| putative polypyrimidine tract binding protein [Schistosoma mansoni]
Length = 584
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 36 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVL--HMVFSAFGPVQKIAM 93
A SA++ + + V + + VL +E + ++ + L M F FG + ++
Sbjct: 131 ATSAVEEANKQFVAFRCENEDSPKTVLHIHVEKLHGSMEIGYLPFFMSFKPFGQILRVIS 190
Query: 94 FDKNGGLQALIQYPDVQTAVVAKEALEGHCIY--DGGFCKLHISYSRHTDLSIKVNNDRS 151
F KN A ++Y + +A VAK + G ++ + F L +SR L I ++
Sbjct: 191 FKKNDSRHAFLEYSNAISAHVAKLQMNGVPLFPMESNFNILRTEFSRQQTLEIHREDNSC 250
Query: 152 RDY 154
RD+
Sbjct: 251 RDF 253
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 24/143 (16%)
Query: 29 TNPYLPVA----PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 84
TNP +P A S +DA G LS ++ PE N + + VT DVL +F
Sbjct: 39 TNP-IPTAITSPRSGVDAGGILSPTTGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFET 97
Query: 85 FGPVQKIAMF-DKN--GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT- 140
G VQ + + DKN G ++Y D A A + L G ++ +++ +Y +T
Sbjct: 98 TGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEI-RVNWAYQSNTT 156
Query: 141 --------------DLSIKVNND 149
DLS +VN+D
Sbjct: 157 SKEDTSNHFHIFVGDLSNEVNDD 179
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 24/143 (16%)
Query: 29 TNPYLPVA----PSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSA 84
TNP +P A S +DA G LS ++ PE N + + VT DVL +F
Sbjct: 41 TNP-IPTAITSPRSGVDAGGILSPTTGFRRAAPEPNKRALYVGGLDQRVTEDVLRQIFET 99
Query: 85 FGPVQKIAMF-DKN--GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHT- 140
G VQ + + DKN G ++Y D A A + L G ++ +++ +Y +T
Sbjct: 100 TGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEI-RVNWAYQSNTT 158
Query: 141 --------------DLSIKVNND 149
DLS +VN+D
Sbjct: 159 SKEDTSNHFHIFVGDLSNEVNDD 181
>gi|407844094|gb|EKG01787.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 59 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 105
S LL S+ N QY V+ +++ +F +G VQKI + KN +QAL+Q
Sbjct: 162 SKTLLVSMFNTQYDVSAAAQITPMIVYQIFGNYGSVQKIVVLPKNESSQRNHNRVQALVQ 221
Query: 106 YPDVQTAVVAKEALEGH--CIYDGGFCKLHISYSRHTDL 142
+ TA K L+G I D L I +SR D+
Sbjct: 222 FDSKVTAENVKSILQGQPVTIGDTVTFTLDIQFSRMDDI 260
>gi|328792476|ref|XP_003251730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L [Apis
mellifera]
Length = 394
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 103 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
+I + V++A AKE L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 1 MITFDSVESATRAKETLHGADIYSGC-CTLKIDFAKPTKLNVYKNDAESWDYTTPT 55
>gi|407405096|gb|EKF30263.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 336
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 59 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 105
S LL S+ N QY V+ +++ +F +G VQKI + KN +QAL+Q
Sbjct: 162 SKTLLVSMFNTQYDVSAAAQITPMIVYQIFGNYGSVQKIVVLPKNESSQRNHNRVQALVQ 221
Query: 106 YPDVQTAVVAKEALEGH--CIYDGGFCKLHISYSRHTDL 142
+ TA K L+G I D L I +SR D+
Sbjct: 222 FDSKVTAENVKSILQGQPVTIGDTVTFTLDIQFSRMDDI 260
>gi|397493591|ref|XP_003817687.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Pan paniscus]
Length = 505
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 163 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 212
>gi|440793956|gb|ELR15127.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 515
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 59 SNVLLASIENMQYAV---TLDVLHMVFSAFGPVQKIAMFD-----------KNGGLQALI 104
+ +LL +++ Q V T D++ +FS++G ++KI + + ++ LQ L+
Sbjct: 250 NRILLVTLQTEQEPVIPITADIVWQIFSSYGFIEKIVVMNRQSQEYAEESRRDSRLQTLV 309
Query: 105 QYPDVQTAVVAKEALEGHCIYDGG----FCKLHISYSRHTDLSIKVNN 148
Q+ +A A + L G +Y G L I YS T L++K N+
Sbjct: 310 QFSSPASAQTASQYLNGKTVYVGTDPIMSITLFIQYSHLTQLTVKHNS 357
>gi|71423973|ref|XP_812637.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70877443|gb|EAN90786.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 325
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 59 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 105
S LL S+ N QY V+ +++ +F +G VQKI + KN +QAL+Q
Sbjct: 162 SKTLLVSMFNTQYDVSAAAQITPMIVYQIFGNYGSVQKIVVLPKNESSQRNHNRVQALVQ 221
Query: 106 YPDVQTAVVAKEALEGH--CIYDGGFCKLHISYSRHTDL 142
+ TA K L+G I D L I +SR D+
Sbjct: 222 FDSKVTAENVKSILQGQPVTIGDTVTFTLDIQFSRMDDI 260
>gi|226470156|emb|CAX70359.1| Polypyrimidine tract-binding protein 1 [Schistosoma japonicum]
Length = 415
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Query: 1 MGPCT--LRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDASGQLSVGLDGKKLEPE 58
M CT LR Y T S K+ S + N L SAI+ + + V + +
Sbjct: 99 MTVCTPNLRGKYPIETQFS-KYSSLTNATTNNATL----SAIEEANKQFVTFRCENEDSP 153
Query: 59 SNVLLASIENMQYAVTLDVL--HMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
VL +E + + L M F FG + ++ F KN A +++ + +A VAK
Sbjct: 154 KTVLHIHVEKSYNPMEIGYLPFFMAFKPFGRILRVVSFKKNDSRHAFLEFSNSLSAHVAK 213
Query: 117 EALEGHCIY--DGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
+ G ++ + F L +SR + L I ++ SRD+
Sbjct: 214 LLMNGVPLFPMECNFHILRTEFSRQSTLEIHREDNSSRDF 253
>gi|296224059|ref|XP_002757888.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Callithrix jacchus]
Length = 509
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 216
>gi|403269680|ref|XP_003926844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like [Saimiri
boliviensis boliviensis]
gi|33518884|gb|AAQ20083.1| stromal RNA regulating factor [Homo sapiens]
Length = 508
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 215
>gi|410955436|ref|XP_003984359.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Felis catus]
Length = 510
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 168 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 217
>gi|395731919|ref|XP_002812155.2| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Pongo abelii]
Length = 509
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 167 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 216
>gi|167522112|ref|XP_001745394.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776352|gb|EDQ89972.1| predicted protein [Monosiga brevicollis MX1]
Length = 459
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
P S VL +I N + TL+ LH + +G V +I K+G +Q L +Y A VA
Sbjct: 154 PPSRVLSINICNCPFDPTLEFLHAQMARYGQVLRIVTIRKDGDMQVLAEYAQQSEATVAL 213
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
AL+ LSI+ N +RD+T+
Sbjct: 214 NALQNET------------------LSIRNNTSSARDFTV 235
>gi|109102687|ref|XP_001109883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 1
[Macaca mulatta]
Length = 508
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 215
>gi|402890608|ref|XP_003908575.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like isoform 2
[Papio anubis]
Length = 403
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA++ +V
Sbjct: 61 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAMVDRLNV 110
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMF-DKNGGL---QALIQYPDVQTAVVAKEALEG 121
+ N+ Y VT D + +FS GPV I M D+ G I++PD+QTA A L G
Sbjct: 21 VGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPDIQTADTAIRVLNG 80
Query: 122 HCI 124
H +
Sbjct: 81 HEL 83
>gi|340056209|emb|CCC50538.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 314
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 22/113 (19%)
Query: 59 SNVLLASIENMQYAVTLD------VLHMVFSAFGPVQKIAMFDKN-------GGLQALIQ 105
S LL S+ N QY V+ +++ +F+ +G VQKI + KN +QAL+Q
Sbjct: 166 SKTLLVSMFNTQYDVSAAAQINPMIVYQIFANYGAVQKIVVLPKNESSQRNHNRVQALVQ 225
Query: 106 YPDVQTAVVAKEALEGHCIYDGGFC--KLHISYSRHTD-------LSIKVNND 149
+ TA K L+G + G L I +SR D +S+ +N D
Sbjct: 226 FDSKATAENVKNILQGQPVTIGETVTFTLDIQFSRMDDIKTSNPAISLVINED 278
>gi|20453185|gb|AAM19833.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
gi|27764946|gb|AAO23594.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
Length = 901
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 224 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNN---PRIKIMY 278
Query: 137 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ--------QPVPMVGATAN 182
S D S RSR T M N+ PS + P+ G
Sbjct: 279 SNDELPPEQDDTSFYSGMKRSR------TDMFNNDPSFVSSPHSTGIPGSMRPLRGTNER 332
Query: 183 QYNGAQFAPPPPEQPMMHQPTAAGWGAVP 211
YNGA++ ++P +P+A G G +P
Sbjct: 333 SYNGAEYNDVVGKEPNWRRPSANGTGILP 361
>gi|145331109|ref|NP_001078046.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331111|ref|NP_001078047.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331113|ref|NP_001078048.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|290463421|sp|Q8LPQ9.2|FPA_ARATH RecName: Full=Flowering time control protein FPA
gi|330255169|gb|AEC10263.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255170|gb|AEC10264.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255171|gb|AEC10265.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 901
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 224 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNN---PRIKIMY 278
Query: 137 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ--------QPVPMVGATAN 182
S D S RSR T M N+ PS + P+ G
Sbjct: 279 SNDELPPEQDDTSFYSGMKRSR------TDMFNNDPSFVSSPHSTGIPGSMRPLRGTNER 332
Query: 183 QYNGAQFAPPPPEQPMMHQPTAAGWGAVP 211
YNGA++ ++P +P+A G G +P
Sbjct: 333 SYNGAEYNDVVGKEPNWRRPSANGTGILP 361
>gi|2288985|gb|AAB64314.1| hypothetical protein [Arabidopsis thaliana]
Length = 1056
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 379 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNNP---RIKIMY 433
Query: 137 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ--------QPVPMVGATAN 182
S D S RSR T M N+ PS + P+ G
Sbjct: 434 SNDELPPEQDDTSFYSGMKRSR------TDMFNNDPSFVSSPHSTGIPGSMRPLRGTNER 487
Query: 183 QYNGAQFAPPPPEQPMMHQPTAAGWGAVP 211
YNGA++ ++P +P+A G G +P
Sbjct: 488 SYNGAEYNDVVGKEPNWRRPSANGTGILP 516
>gi|222423512|dbj|BAH19726.1| AT2G43410 [Arabidopsis thaliana]
Length = 901
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 224 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNN---PRIKIMY 278
Query: 137 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ--------QPVPMVGATAN 182
S D S RSR T M N+ PS + P+ G
Sbjct: 279 SNDGLPPEQDDTSFYSGMKRSR------TDMFNNDPSFVSSPHSTGIPGSMRPLRGTNER 332
Query: 183 QYNGAQFAPPPPEQPMMHQPTAAGWGAVP 211
YNGA++ ++P +P+A G G +P
Sbjct: 333 SYNGAEYNDVVGKEPNWRRPSANGTGILP 361
>gi|61661314|gb|AAX51263.1| FPA [Arabidopsis thaliana]
Length = 1056
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136
+LH FG ++++ + AL+++ + A KE L+G + ++ I Y
Sbjct: 379 ILHNAMILFGEIERVKSYPSRNF--ALVEFRSAEEARQCKEGLQGRLFNNP---RIKIMY 433
Query: 137 S------RHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQ--------QPVPMVGATAN 182
S D S RSR T M N+ PS + P+ G
Sbjct: 434 SNDELPPEQDDTSFYSGMKRSR------TDMFNNDPSFVSSPHSTGIPGSMRPLRGTNER 487
Query: 183 QYNGAQFAPPPPEQPMMHQPTAAGWGAVP 211
YNGA++ ++P +P+A G G +P
Sbjct: 488 SYNGAEYNDVVGKEPNWRRPSANGTGLLP 516
>gi|118382059|ref|XP_001024189.1| hypothetical protein TTHERM_00456820 [Tetrahymena thermophila]
gi|89305956|gb|EAS03944.1| hypothetical protein TTHERM_00456820 [Tetrahymena thermophila
SB210]
Length = 842
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 41 DASGQLSVGLDGKKLEPESNVLLASIENMQYA-VTLDVLHMVFSAFGPVQKIAMFDKNGG 99
D SG+ S + + VLL + N + +T D+++ +F +G + KI +FDK
Sbjct: 20 DYSGRRSQKTTISDVSVKKRVLLVCVYNKKGTLITHDIIYRLFMKYGEIYKILIFDKCKN 79
Query: 100 LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDY 154
+ ++ ++ A A++ L + ++D G K+ + Y++ + + NN DY
Sbjct: 80 WKIFVEMATLEQAEKARDGLNNYQLFDDG-SKMTVYYAKVDQIVFQNNNSGGVDY 133
>gi|222616398|gb|EEE52530.1| hypothetical protein OsJ_34752 [Oryza sativa Japonica Group]
Length = 555
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+ A
Sbjct: 42 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 101
Query: 121 GHCIYDGGFCKLHISY 136
G IYDGG C L + +
Sbjct: 102 GRDIYDGG-CLLDVQH 116
>gi|440803034|gb|ELR23948.1| RNA recognition domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 440
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFD--KNGGLQ--ALIQYPDVQTAVVAKEALEG 121
I N+ + T L V S FG V+++ F+ +NG + AL++Y D + + AKE L+G
Sbjct: 62 IGNLTWWTTDQDLEDVCSQFGKVKQVKFFENKQNGRSKGYALVEYYDAEASRQAKEKLQG 121
Query: 122 HCIYD 126
+ I+D
Sbjct: 122 YTIHD 126
>gi|149050609|gb|EDM02782.1| heterogeneous nuclear ribonucleoprotein L-like (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 261
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 103
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+
Sbjct: 215 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAM 258
>gi|218191723|gb|EEC74150.1| hypothetical protein OsI_09231 [Oryza sativa Indica Group]
Length = 609
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+ A
Sbjct: 56 VLRVTVSQIIYPVTYEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 115
Query: 121 GHCIYDGGFCKLHISY 136
G IYDGG C L + +
Sbjct: 116 GRDIYDGG-CLLDVQH 130
>gi|198459570|ref|XP_001361426.2| GA21622 [Drosophila pseudoobscura pseudoobscura]
gi|198136733|gb|EAL26004.2| GA21622 [Drosophila pseudoobscura pseudoobscura]
Length = 369
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 103 LIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNN-DRSRDYTLPSTPM 161
++++ ++ A A+E L G IY G C L I Y++ L++ N D S DYTL +
Sbjct: 1 MVEFDNLDAATRARENLNGADIY-AGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTGKS 59
Query: 162 VNSQPS---ILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGW 207
+ S P +L QP P++G GA F PP P H T W
Sbjct: 60 LFSIPENVVMLESQP-PLLGP------GAAF--PPFGAPEYHPTTPDNW 99
>gi|145547070|ref|XP_001459217.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427041|emb|CAK91820.1| unnamed protein product [Paramecium tetraurelia]
Length = 647
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 57 PESNVLLASIENM-QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 115
P +NV+L I N ++ D VFS FG +Q++ +F+++ + +++ + ++A+ A
Sbjct: 12 PRTNVILVVITNKANKTLSHDKYFKVFSPFGTIQRMLIFERSLTWKTFVEFDNPESALKA 71
Query: 116 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
+ + D +++ S+ T ++ + NN DYT
Sbjct: 72 RSQMNDKFFCDDNTLLMNVYASKLTYITFQENNTGGVDYT 111
>gi|358341535|dbj|GAA29842.2| polypyrimidine tract-binding protein 1, partial [Clonorchis
sinensis]
Length = 520
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 77 VLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK------------EALEGHCI 124
+LH +F +G + +I F KN LI++ + A VA + L G I
Sbjct: 88 ILHKIFYRYGKILRIITFPKNNQYHGLIEFENHIHAFVAMLVSVGLTKRHSPKHLNGQNI 147
Query: 125 YDGGFCKLHISYSRHTD-LSIKVNNDRSRDYT---LPSTPMVN 163
Y G C L + +S++ L ++ +D+ RDY L +VN
Sbjct: 148 YTGC-CSLLVEFSKNRGPLEVRHESDKCRDYINNPLTEEELVN 189
>gi|431912753|gb|ELK14771.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Pteropus
alecto]
Length = 484
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQAL 103
+ VLL SI+N Y +T+DVL+ V + G VQ+I +F +N G+QA+
Sbjct: 166 NKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN-GIQAM 209
>gi|222623816|gb|EEE57948.1| hypothetical protein OsJ_08670 [Oryza sativa Japonica Group]
Length = 353
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V++ +G V + ++AL+ + A A+ A
Sbjct: 157 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 216
Query: 121 GHCIYDGGFCKLHISY 136
G IYDGG C + + +
Sbjct: 217 GRDIYDGG-CLMDVQH 231
>gi|317142939|ref|XP_001819205.2| pre-mRNA branch site p14-like protein [Aspergillus oryzae RIB40]
Length = 146
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQ 110
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 35 SRKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVH 93
Query: 111 TAVVAKEALEG 121
A A + L G
Sbjct: 94 DAKQACDKLNG 104
>gi|118381836|ref|XP_001024078.1| polypyrimidine tract binding protein, putative [Tetrahymena
thermophila]
gi|89305845|gb|EAS03833.1| polypyrimidine tract binding protein, putative [Tetrahymena
thermophila SB210]
Length = 1213
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 36 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTL-DVLHMVFSAFGPVQKIAMF 94
+ S ID QLS G+ K VLL ++N Q V ++ FS FG V++I +F
Sbjct: 209 SSSKID---QLSKGIRPSK------VLLVMVQNPQDEVIEHRIIFEKFSFFGEVEQILIF 259
Query: 95 DKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF-CKLHISYSRHTDLSIKVNN 148
K + + ++ A+ AK ALE I K+ + +S +L +K N
Sbjct: 260 SKKQPWKLFVDMNSIEVAIKAKNALENSSICVNNLELKMKVQFSSQQNLVLKNGN 314
>gi|47497054|dbj|BAD19106.1| unknown protein [Oryza sativa Japonica Group]
gi|47497776|dbj|BAD19876.1| unknown protein [Oryza sativa Japonica Group]
Length = 430
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V++ +G V + ++AL+ + A A+ A
Sbjct: 56 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 115
Query: 121 GHCIYDGGFCKLHISY 136
G IYDGG C + + +
Sbjct: 116 GRDIYDGG-CLMDVQH 130
>gi|145482375|ref|XP_001427210.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394290|emb|CAK59812.1| unnamed protein product [Paramecium tetraurelia]
Length = 655
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 57 PESNVLLASIENM-QYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVA 115
P +NV+L I N ++ D VFS FG +Q++ +F+++ + +++ + +A+ A
Sbjct: 12 PRTNVILVVITNKANKTLSHDKYFKVFSPFGTIQRMLIFERSLTWKTFVEFDNPDSALKA 71
Query: 116 KEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYT 155
+ + D +++ S+ T ++ + NN DYT
Sbjct: 72 RSQMNDKFFCDDNTLLMNVYASKLTYITFQENNTGGVDYT 111
>gi|383856703|ref|XP_003703847.1| PREDICTED: heterogeneous nuclear ribonucleoprotein L-like
[Megachile rotundata]
Length = 421
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 106 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPS 158
+ V++A AKE L G IY G C L I +++ T L++ N+ S DYT P+
Sbjct: 31 FDSVESATRAKETLHGADIYSGC-CTLKIDFAKPTKLNVYKNDAESWDYTTPT 82
>gi|145529570|ref|XP_001450568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418190|emb|CAK83171.1| unnamed protein product [Paramecium tetraurelia]
Length = 600
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 59 SNVLLASIENMQYAVTL--DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAK 116
+NV+L I N + TL D VFS FG +Q++ +F+++ + +++ + ++A+ A+
Sbjct: 6 TNVILVVITN-KANKTLGHDKYFKVFSQFGTIQRMLIFERSLTWKTFVEFDNPESAIKAR 64
Query: 117 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTL 156
+ + D +++ S+ T ++ + NN DYTL
Sbjct: 65 QVMNDKPFCDDSQLMMNVYASKLTYITFQENNTGGVDYTL 104
>gi|125535222|gb|EAY81770.1| hypothetical protein OsI_36944 [Oryza sativa Indica Group]
Length = 1325
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+ A
Sbjct: 781 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 840
Query: 121 GHCIYDGGFCKLHI 134
G IYDGG C L +
Sbjct: 841 GRDIYDGG-CLLDV 853
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A+ A
Sbjct: 42 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDVERARSATH 101
Query: 121 GHCIYDGGFCKLHI 134
G IYDGG C L +
Sbjct: 102 GRDIYDGG-CLLDV 114
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 53 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQ---ALIQYPDV 109
K +EP NVL I N+ Y VT D L VFS FG ++ + M N GL A ++Y +V
Sbjct: 130 KNIEPH-NVLY--IGNLYYEVTPDQLKRVFSRFGDIESVRMVYDNRGLSRGFAYVEYKNV 186
Query: 110 QTAVVAKEALEGHCIYDG 127
A A + L+ +++G
Sbjct: 187 SDAQAAIDNLDMQ-VFEG 203
>gi|297600029|ref|NP_001048354.2| Os02g0789700 [Oryza sativa Japonica Group]
gi|255671306|dbj|BAF10268.2| Os02g0789700, partial [Oryza sativa Japonica Group]
Length = 451
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V++ +G V + ++AL+ + A A+ A
Sbjct: 77 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 136
Query: 121 GHCIYDGGFCKLHISY 136
G IYDGG C + + +
Sbjct: 137 GRDIYDGG-CLMDVQH 151
>gi|426195143|gb|EKV45073.1| hypothetical protein AGABI2DRAFT_144580 [Agaricus bisporus var.
bisporus H97]
Length = 404
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 36 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 95
A SA+ S L +G +P +L++ + ++ ++ T D L +F +GP++K+ +
Sbjct: 223 AQSALPGSTDLDLGSYATSADPTPTLLVSKLPSIIFSSTQD-LEPLFYPYGPLKKLRVIG 281
Query: 96 K--NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 138
NG L L QY A AKEAL G + C++ + + R
Sbjct: 282 AGLNGTLSVLAQYSSSSAAQEAKEALHGQNYIN---CQVEVQFLR 323
>gi|67900938|ref|XP_680725.1| hypothetical protein AN7456.2 [Aspergillus nidulans FGSC A4]
gi|40742846|gb|EAA62036.1| hypothetical protein AN7456.2 [Aspergillus nidulans FGSC A4]
gi|259483762|tpe|CBF79417.1| TPA: pre-mRNA branch site protein p14, putative (AFU_orthologue;
AFUA_2G05960) [Aspergillus nidulans FGSC A4]
Length = 172
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQ 110
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 61 SRKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVH 119
Query: 111 TAVVAKEALEG 121
A A + L G
Sbjct: 120 DAKQACDKLNG 130
>gi|317028095|ref|XP_001400564.2| pre-mRNA branch site p14-like protein [Aspergillus niger CBS
513.88]
Length = 122
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 53 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 111
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 12 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 70
Query: 112 AVVAKEALEG 121
A A + L G
Sbjct: 71 AKQACDKLNG 80
>gi|241631201|ref|XP_002410244.1| heterogeneous nuclear ribonucleoprotein L, putative [Ixodes
scapularis]
gi|215503358|gb|EEC12852.1| heterogeneous nuclear ribonucleoprotein L, putative [Ixodes
scapularis]
Length = 97
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALI 104
G++ E ++VLL +I N Y +T+DV+H + + G V +I +F KN G+QA++
Sbjct: 27 GQEEEKPNHVLLMTILNPAYPITVDVIHTISTPSGKVMRIVIFKKN-GVQAMV 78
>gi|258574487|ref|XP_002541425.1| pre-mRNA branch site protein p14 [Uncinocarpus reesii 1704]
gi|237901691|gb|EEP76092.1| pre-mRNA branch site protein p14 [Uncinocarpus reesii 1704]
Length = 115
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 54 KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQTA 112
KL PE+N +L ++N+ Y VT D L +F FGP+++I N A + Y DV A
Sbjct: 6 KLAPEANRILF-VKNLSYNVTADELFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVHDA 64
Query: 113 VVAKEALEG 121
A + L G
Sbjct: 65 KQACDKLNG 73
>gi|148222234|ref|NP_001080089.1| U1 small nuclear ribonucleoprotein A [Xenopus laevis]
gi|27924189|gb|AAH44979.1| Snf protein [Xenopus laevis]
Length = 282
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 83/215 (38%), Gaps = 54/215 (25%)
Query: 53 KKLEPESNVLLASI-ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL--QALIQYPDV 109
+++ P + + + ++ E ++ L+ +FS FG + I + +N + QA + + +
Sbjct: 4 QEVRPNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDI-LVSRNLKMRGQAFVIFKET 62
Query: 110 QTAVVAKEALEGHCIYDGGFCKLHISYSR-HTDLSIK-----VNNDRSRDYTLPSTPMVN 163
+A A +++G YD + I YS+ +D+ K V DR R
Sbjct: 63 SSATNALRSMQGFPFYD---KPMRIQYSKTDSDIIAKMKGTFVERDRKRQEKR------- 112
Query: 164 SQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH 223
+ VP V N GA P P Q A Q+MP M
Sbjct: 113 -------KVKVPEVQGVKNAMPGAALLPGVPGQM--------------AAMQNMPGMTQA 151
Query: 224 PYMPPGSMPMGPGMMQMHMPGQSGMQHHHGAMPPP 258
P M MHM GQ+ HH G MPPP
Sbjct: 152 PRM-------------MHMAGQAPYMHHPGMMPPP 173
>gi|218191477|gb|EEC73904.1| hypothetical protein OsI_08733 [Oryza sativa Indica Group]
Length = 219
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A+ A
Sbjct: 42 VLRVTVSQIIYPVTYEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDVERARSATH 101
Query: 121 GHCIYDGGFCKLHISY 136
G IYDGG C L + +
Sbjct: 102 GRDIYDGG-CLLDVQH 116
>gi|119193232|ref|XP_001247222.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320040131|gb|EFW22065.1| pre-mRNA branch site protein p14 [Coccidioides posadasii str.
Silveira]
gi|392863538|gb|EAS35707.2| pre-mRNA branch site protein p14 [Coccidioides immitis RS]
Length = 115
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 54 KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQTA 112
KL PE+N +L ++N+ Y VT D L +F FGP+++I N A + Y DV A
Sbjct: 6 KLAPEANRILF-VKNLSYNVTADDLFDLFGKFGPIRQIRQGIAANSKGTAFVVYEDVHDA 64
Query: 113 VVAKEALEG 121
A + L G
Sbjct: 65 KQACDKLNG 73
>gi|350635238|gb|EHA23600.1| hypothetical protein ASPNIDRAFT_138217 [Aspergillus niger ATCC
1015]
Length = 112
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 53 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 111
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 4 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 62
Query: 112 AVVAKEALEG 121
A A + L G
Sbjct: 63 AKQACDKLNG 72
>gi|1173326|sp|P45429.1|SNRPA_XENLA RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis]
Length = 282
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 82/215 (38%), Gaps = 54/215 (25%)
Query: 53 KKLEPESNVLLASI-ENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGL--QALIQYPDV 109
+++ P + + + ++ E ++ L+ +FS FG + I + +N + QA + + +
Sbjct: 4 QEVRPNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDI-LVSRNLKMRGQAFVIFKET 62
Query: 110 QTAVVAKEALEGHCIYDGGFCKLHISYSR-HTDLSIK-----VNNDRSRDYTLPSTPMVN 163
+A A +++G YD + I YS+ +D+ K V DR R
Sbjct: 63 SSATNALRSMQGFPFYD---KPMRIQYSKTDSDIIAKMKGTFVERDRKRQEKR------- 112
Query: 164 SQPSILGQQPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVPPASQSMPMMGNH 223
+ VP V N GA P P Q A Q MP M
Sbjct: 113 -------KVKVPEVQGVKNAMPGAALLPGVPGQM--------------AAMQDMPGMTQA 151
Query: 224 PYMPPGSMPMGPGMMQMHMPGQSGMQHHHGAMPPP 258
P M MHM GQ+ HH G MPPP
Sbjct: 152 PRM-------------MHMAGQAPYMHHPGMMPPP 173
>gi|115400751|ref|XP_001215964.1| pre-mRNA branch site protein p14 [Aspergillus terreus NIH2624]
gi|119480377|ref|XP_001260217.1| pre-mRNA branch site protein p14, putative [Neosartorya fischeri
NRRL 181]
gi|114191630|gb|EAU33330.1| pre-mRNA branch site protein p14 [Aspergillus terreus NIH2624]
gi|119408371|gb|EAW18320.1| pre-mRNA branch site protein p14, putative [Neosartorya fischeri
NRRL 181]
gi|134057510|emb|CAK48864.1| unnamed protein product [Aspergillus niger]
gi|358367610|dbj|GAA84228.1| pre-mRNA branch site protein p14 [Aspergillus kawachii IFO 4308]
Length = 113
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 53 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 111
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 3 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 61
Query: 112 AVVAKEALEG 121
A A + L G
Sbjct: 62 AKQACDKLNG 71
>gi|121715254|ref|XP_001275236.1| pre-mRNA branch site protein p14, putative [Aspergillus clavatus
NRRL 1]
gi|238501940|ref|XP_002382204.1| hypothetical protein AFLA_130110 [Aspergillus flavus NRRL3357]
gi|83767063|dbj|BAE57203.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|119403393|gb|EAW13810.1| pre-mRNA branch site protein p14, putative [Aspergillus clavatus
NRRL 1]
gi|220692441|gb|EED48788.1| hypothetical protein AFLA_130110 [Aspergillus flavus NRRL3357]
gi|391863731|gb|EIT73031.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 113
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 53 KKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNGGLQALIQYPDVQT 111
+KL PE+N +L ++N+ Y VT + L +F FGP+++I N A + Y DV
Sbjct: 3 RKLAPEANRILF-VKNLNYNVTAEQLFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHD 61
Query: 112 AVVAKEALEG 121
A A + L G
Sbjct: 62 AKQACDKLNG 71
>gi|297728967|ref|NP_001176847.1| Os12g0223500 [Oryza sativa Japonica Group]
gi|222616825|gb|EEE52957.1| hypothetical protein OsJ_35600 [Oryza sativa Japonica Group]
gi|255670154|dbj|BAH95575.1| Os12g0223500 [Oryza sativa Japonica Group]
Length = 297
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+
Sbjct: 63 VLCVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSTTH 122
Query: 121 GHCIYDGGFCKLHISY 136
GH IYD G C L + +
Sbjct: 123 GHDIYDEG-CLLDMQH 137
>gi|77553984|gb|ABA96780.1| hypothetical protein LOC_Os12g12190 [Oryza sativa Japonica Group]
Length = 800
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120
VL ++ + Y VT +VLH V+ +G V + ++AL+ + A A+
Sbjct: 63 VLCVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSTTH 122
Query: 121 GHCIYDGGFCKLHISY 136
GH IYD G C L + +
Sbjct: 123 GHDIYDEG-CLLDMQH 137
>gi|115442121|ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|20160777|dbj|BAB89718.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|20161317|dbj|BAB90241.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113534871|dbj|BAF07254.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|215704529|dbj|BAG94162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189701|gb|EEC72128.1| hypothetical protein OsI_05123 [Oryza sativa Indica Group]
gi|222619840|gb|EEE55972.1| hypothetical protein OsJ_04706 [Oryza sativa Japonica Group]
Length = 460
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 28/188 (14%)
Query: 73 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQ------ALIQYPDVQTAVVAKEALEGHCIYD 126
VT L +FS +G ++ + + G Q A ++Y + AV A EAL G +
Sbjct: 139 VTDTELTDLFSKYGNIKDLQIL--RGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIE 196
Query: 127 GGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATAN---- 182
G L + ++ D + +++ L S+ M ++ P Q + GA
Sbjct: 197 GSSVPLVVKWA---DTEKERQARKAQKAQLQSSNMPSASP----MQQSSLFGALQMGYMP 249
Query: 183 QYNGAQFAPPP-------PEQPMMHQPTAAGWGAVPPASQSMPMMGNHPYMPPGSMPMGP 235
QYNG + PP P PM +Q T V P +Q + G +P + P S+P
Sbjct: 250 QYNGFGYQPPGTYGLMQYPLSPMQNQATFPNM--VQPVNQGNSIRGVNPELSPNSVPRSF 307
Query: 236 GMMQMHMP 243
MQ+ P
Sbjct: 308 NAMQLSSP 315
>gi|354508326|ref|XP_003516204.1| PREDICTED: polypyrimidine tract-binding protein 1-like, partial
[Cricetulus griseus]
Length = 214
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 52 GKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI 91
G + +S VL +EN+ Y VTLDVL+ +FS FG V KI
Sbjct: 173 GMAMAGQSPVLRVLVENLFYPVTLDVLNQIFSKFGTVVKI 212
>gi|409076329|gb|EKM76701.1| hypothetical protein AGABI1DRAFT_130995 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 404
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 36 APSAIDASGQLSVGLDGKKLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD 95
A SA S L +G +P +L++ + ++ ++ T D L +F +GP++K+ +
Sbjct: 223 AQSARPGSTDLDLGSYATSADPTPTLLVSKLPSIIFSSTQD-LEPLFYPYGPLKKLRVIG 281
Query: 96 K--NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 138
NG L L QY A AKEAL G + C++ + + R
Sbjct: 282 AGLNGTLSVLAQYSSSSAAQEAKEALHGQNYIN---CQVEVQFLR 323
>gi|307694571|gb|ADN84938.1| hephaestus [Biston betularia]
Length = 181
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN 97
+ VL IE+M Y + LDVL+ +F +G V KI F KN
Sbjct: 142 NTVLRVIIEHMLYPIVLDVLYSIFQRYGKVLKIVTFTKN 180
>gi|297828039|ref|XP_002881902.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
gi|297327741|gb|EFH58161.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
Length = 902
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 26/176 (14%)
Query: 51 DGK-KLEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV 109
DGK ++P + + N +LH +G +++I + + +L+++
Sbjct: 197 DGKGDVQPSKVLWIGYPPNATQCNDEQMLHNAMILYGEIERIKCYPSSHF--SLVEFRSA 254
Query: 110 QTAVVAKEALEGHCIYDGGFCKLHISYSRHT------DLSIKVNNDRSRDYTLPSTPMVN 163
+ A AKE ++G + ++ I YS D S RSR T M N
Sbjct: 255 EEARHAKEGIQGRLFNN---PRIKIMYSNDELPPEPDDTSFYSGMKRSR------TDMFN 305
Query: 164 SQPSILGQ--------QPVPMVGATANQYNGAQFAPPPPEQPMMHQPTAAGWGAVP 211
+ PS + P+ G+ YNG+++ ++P +P+A G G +P
Sbjct: 306 NDPSFISSPHSTGIPGSMRPLRGSNERSYNGSEYNDVVGKEPNWRRPSANGTGILP 361
>gi|320166285|gb|EFW43184.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 683
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 73 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132
VT L FS GP++ F +NG A I++ D Q+A +A +L G + G +
Sbjct: 148 VTSSALTEFFSTVGPIKHCQQFSQNGNSFAFIEFGDHQSATLAVGSLNGALL---GGQPI 204
Query: 133 HISYSRH 139
+ +S H
Sbjct: 205 RVGWSHH 211
>gi|407922123|gb|EKG15250.1| hypothetical protein MPH_07584 [Macrophomina phaseolina MS6]
Length = 589
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 66 IENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIY 125
+ N+ + D L +FS +++ K G +++ DV A A L GH ++
Sbjct: 404 VGNLPIDTSEDELKAMFSKQRGYKRLCFRTKANGPMCFVEFEDVSFATKALNELYGHPLH 463
Query: 126 DGGFCKLHISYSRHTDLSIKVNNDRSRDYTLPSTPMV 162
+ + +S+S++ + V N ++ + +P+TPM
Sbjct: 464 NSVKGGIRLSFSKN---PLGVRNGQNNNSNIPATPMT 497
>gi|328853841|gb|EGG02977.1| hypothetical protein MELLADRAFT_109765 [Melampsora larici-populina
98AG31]
Length = 300
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 145 KVNNDRSRDYTLPSTPMVNSQPSILGQQPVPMVGATANQYNGAQFAPPP------PEQPM 198
K+ N RD T + P V SQ S L Q P A +Y G Q PPP P QP
Sbjct: 46 KIPNRFWRDPTTTTIPAVKSQSSELAQPAAPQATTPAGKYQGIQLPPPPTLQATTPSQPS 105
Query: 199 MHQPTAAG 206
+ QP G
Sbjct: 106 IPQPDTIG 113
>gi|118368089|ref|XP_001017254.1| hypothetical protein TTHERM_00196000 [Tetrahymena thermophila]
gi|89299021|gb|EAR97009.1| hypothetical protein TTHERM_00196000 [Tetrahymena thermophila SB210]
Length = 1455
Score = 38.5 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 73 VTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132
VTL +L +FS FGP++KI M+ KN L++Y +++A AKE+L D ++
Sbjct: 1241 VTLKMLINIFSYFGPIEKI-MYLKNKS-SCLVEYTRIESASAAKESLNDMTFMDQ---EI 1295
Query: 133 HISYSRHTDLSIK 145
I YS + + IK
Sbjct: 1296 KIFYSNYDQIYIK 1308
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,723,778,335
Number of Sequences: 23463169
Number of extensions: 209403541
Number of successful extensions: 769944
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 4131
Number of HSP's that attempted gapping in prelim test: 749041
Number of HSP's gapped (non-prelim): 19447
length of query: 264
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 124
effective length of database: 9,074,351,707
effective search space: 1125219611668
effective search space used: 1125219611668
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)