Query 024708
Match_columns 264
No_of_seqs 285 out of 1280
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 13:03:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024708.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024708hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2adba1 d.58.7.1 (A:177-284) P 99.9 1.3E-26 9.6E-31 180.8 10.8 107 56-163 2-108 (108)
2 d2adca1 d.58.7.1 (A:335-443) P 99.8 1.2E-20 8.8E-25 145.6 10.8 97 59-160 2-102 (109)
3 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.7 3.7E-18 2.7E-22 126.5 10.7 80 55-139 4-83 (83)
4 d2adca2 d.58.7.1 (A:444-531) P 99.7 7.3E-18 5.3E-22 125.8 10.7 82 55-140 6-87 (88)
5 d1wexa_ d.58.7.1 (A:) Heteroge 99.7 7.4E-17 5.4E-21 124.2 12.0 86 55-147 11-98 (104)
6 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.7 6.9E-17 5E-21 118.7 9.8 75 58-141 4-78 (79)
7 d1whya_ d.58.7.1 (A:) Putative 99.7 1.3E-16 9.7E-21 121.3 10.6 80 56-140 14-93 (97)
8 d2cq1a1 d.58.7.1 (A:51-138) Po 99.7 2E-16 1.5E-20 118.0 10.7 81 56-143 5-87 (88)
9 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.7 2.3E-16 1.7E-20 120.2 9.8 77 57-140 16-92 (96)
10 d2cpja1 d.58.7.1 (A:65-150) No 99.6 4.5E-16 3.3E-20 116.2 9.6 77 58-141 7-83 (86)
11 d1b7fa1 d.58.7.1 (A:123-204) S 99.6 7.2E-16 5.3E-20 113.0 9.7 76 59-139 2-81 (82)
12 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 1.3E-15 9.6E-20 114.1 10.7 80 57-141 6-87 (90)
13 d1whxa_ d.58.7.1 (A:) Probable 99.6 6.7E-16 4.9E-20 118.7 9.3 78 58-142 9-86 (111)
14 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 1.3E-15 9.2E-20 118.2 10.8 78 57-140 5-84 (114)
15 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.6 1E-15 7.3E-20 114.5 9.8 78 58-140 6-87 (88)
16 d2cqba1 d.58.7.1 (A:1-89) Pept 99.6 5.7E-16 4.2E-20 115.9 8.3 80 57-142 3-87 (89)
17 d1fxla1 d.58.7.1 (A:37-118) Hu 99.6 1.8E-15 1.3E-19 110.7 10.1 76 60-140 3-82 (82)
18 d1x4da1 d.58.7.1 (A:8-96) Matr 99.6 1.3E-15 9.3E-20 114.7 8.9 78 56-139 5-84 (89)
19 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.6 2.8E-15 2E-19 113.3 10.2 79 57-140 12-91 (95)
20 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.6 2.8E-15 2.1E-19 113.2 9.7 80 57-142 7-91 (93)
21 d1wf2a_ d.58.7.1 (A:) Heteroge 99.6 1.6E-15 1.1E-19 116.1 8.3 75 58-140 14-88 (98)
22 d2cq0a1 d.58.7.1 (A:231-320) E 99.6 2.2E-15 1.6E-19 112.8 8.9 79 58-141 7-89 (90)
23 d2cpza1 d.58.7.1 (A:383-484) C 99.6 3.9E-15 2.8E-19 114.2 10.4 81 56-141 15-99 (102)
24 d2cpda1 d.58.7.1 (A:223-308) A 99.6 3.3E-15 2.4E-19 110.7 9.6 78 57-141 6-83 (86)
25 d1cvja1 d.58.7.1 (A:11-90) Pol 99.6 2.6E-15 1.9E-19 110.2 8.7 74 61-139 2-79 (80)
26 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.6 2.8E-15 2.1E-19 114.7 8.6 78 57-140 16-95 (99)
27 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.6 1E-14 7.6E-19 110.0 10.9 79 57-140 5-87 (93)
28 d1whwa_ d.58.7.1 (A:) Probable 99.6 9E-15 6.5E-19 111.1 10.6 80 57-141 6-89 (99)
29 d1weya_ d.58.7.1 (A:) Calcipre 99.6 5.4E-15 3.9E-19 114.5 9.5 81 57-142 3-86 (104)
30 d2ghpa1 d.58.7.1 (A:116-196) U 99.6 3.8E-15 2.8E-19 109.0 8.1 74 60-139 2-80 (81)
31 d1fxla2 d.58.7.1 (A:119-203) H 99.6 8.3E-15 6.1E-19 108.7 10.1 76 59-137 6-85 (85)
32 d1nu4a_ d.58.7.1 (A:) Spliceso 99.6 3.8E-15 2.8E-19 111.8 8.1 78 58-141 2-85 (91)
33 d1wg1a_ d.58.7.1 (A:) Probable 99.6 3.8E-15 2.8E-19 111.5 8.1 77 58-142 4-80 (88)
34 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 1.2E-14 8.8E-19 109.5 10.8 78 58-140 10-89 (93)
35 d2cpha1 d.58.7.1 (A:454-547) P 99.5 1E-14 7.3E-19 110.3 9.6 79 58-141 7-91 (94)
36 d1no8a_ d.58.7.1 (A:) Nuclear 99.5 1.1E-14 7.9E-19 106.4 9.1 72 62-138 3-77 (78)
37 d1cvja2 d.58.7.1 (A:91-179) Po 99.5 6.1E-15 4.5E-19 110.2 7.7 76 60-141 9-87 (89)
38 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.5 1.2E-14 8.7E-19 116.4 10.0 79 58-141 41-123 (139)
39 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.5 2.3E-14 1.7E-18 104.3 10.4 73 62-142 1-73 (75)
40 d2cqca1 d.58.7.1 (A:109-191) A 99.5 1.9E-14 1.4E-18 105.8 9.8 73 57-134 7-83 (83)
41 d2cpxa1 d.58.7.1 (A:291-392) R 99.5 3.2E-15 2.3E-19 113.6 5.4 79 57-141 16-99 (102)
42 d2cpfa1 d.58.7.1 (A:362-446) P 99.5 1.1E-14 8.2E-19 107.4 8.3 73 62-139 1-80 (85)
43 d1fjca_ d.58.7.1 (A:) Nucleoli 99.5 2.9E-15 2.1E-19 113.4 5.2 79 57-141 14-92 (96)
44 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 4.7E-15 3.4E-19 109.0 6.1 74 61-141 3-77 (80)
45 d2cq2a1 d.58.7.1 (A:25-125) Al 99.5 8.7E-15 6.3E-19 112.7 7.8 69 57-127 16-84 (101)
46 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.5 3.4E-14 2.5E-18 105.8 9.7 79 58-141 4-86 (90)
47 d2ghpa3 d.58.7.1 (A:206-291) U 99.5 3.8E-14 2.8E-18 105.3 9.4 77 58-140 3-85 (86)
48 d1b7fa2 d.58.7.1 (A:205-289) S 99.5 5.1E-14 3.7E-18 104.1 10.0 77 58-137 5-85 (85)
49 d2u2fa_ d.58.7.1 (A:) Splicing 99.5 2.2E-14 1.6E-18 106.5 8.1 76 61-141 3-82 (85)
50 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 1.3E-14 9.2E-19 108.4 6.0 76 57-140 3-78 (88)
51 d1wg4a_ d.58.7.1 (A:) Splicing 99.5 5.9E-14 4.3E-18 107.1 9.9 75 58-140 14-88 (98)
52 d3begb1 d.58.7.1 (B:121-207) S 99.5 1.6E-14 1.2E-18 107.5 6.5 71 61-139 2-72 (87)
53 d1p1ta_ d.58.7.1 (A:) Cleavage 99.5 3.4E-14 2.5E-18 108.6 8.0 77 59-140 8-88 (104)
54 d2cpia1 d.58.7.1 (A:101-189) E 99.5 4.3E-14 3.1E-18 105.9 8.1 73 58-135 7-89 (89)
55 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.5 8.6E-14 6.3E-18 104.4 9.8 79 57-140 6-94 (98)
56 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.5 4.5E-14 3.2E-18 103.6 7.0 75 62-141 1-80 (83)
57 d2cq4a1 d.58.7.1 (A:132-232) R 99.4 1.7E-13 1.3E-17 105.1 8.7 74 59-139 18-96 (101)
58 d2cpea1 d.58.7.1 (A:353-453) R 99.4 1.7E-13 1.3E-17 103.4 8.4 79 57-140 6-96 (101)
59 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.4 1.7E-13 1.3E-17 104.5 7.6 76 58-138 17-95 (101)
60 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.4 3.5E-13 2.6E-17 102.7 9.2 78 57-141 13-95 (104)
61 d2cqda1 d.58.7.1 (A:1-103) RNA 99.4 3.3E-13 2.4E-17 103.4 9.0 75 59-140 10-89 (103)
62 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.4 5.6E-14 4.1E-18 105.8 4.1 75 58-139 12-90 (91)
63 d1x4ba1 d.58.7.1 (A:8-110) Het 99.4 7E-13 5.1E-17 102.1 8.8 76 59-141 20-100 (103)
64 d2cqpa1 d.58.7.1 (A:917-1002) 99.4 5.1E-13 3.7E-17 98.4 7.5 76 57-137 7-86 (86)
65 d2ghpa2 d.58.7.1 (A:41-115) U4 99.4 1.2E-12 9E-17 94.9 9.4 70 61-136 2-73 (75)
66 d2msta_ d.58.7.1 (A:) Neural R 99.4 5.8E-13 4.2E-17 95.3 7.2 70 62-137 2-75 (75)
67 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.4 1.7E-12 1.3E-16 95.9 9.6 73 60-138 7-83 (84)
68 d2disa1 d.58.7.1 (A:8-103) Hyp 99.4 7E-13 5.1E-17 99.9 7.5 78 59-141 1-86 (96)
69 d1l3ka2 d.58.7.1 (A:103-181) N 99.3 2.1E-12 1.5E-16 93.5 9.4 72 60-137 3-78 (79)
70 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.3 2.7E-13 2E-17 96.8 4.5 64 62-127 1-68 (72)
71 d1zh5a2 d.58.7.1 (A:105-189) L 99.3 1.7E-12 1.3E-16 96.1 9.0 74 59-138 6-82 (85)
72 d1uawa_ d.58.7.1 (A:) Musashi- 99.3 5.3E-13 3.8E-17 97.5 6.0 71 61-137 2-76 (77)
73 d2cqga1 d.58.7.1 (A:96-185) TA 99.3 4.2E-12 3E-16 95.3 10.7 76 58-140 7-86 (90)
74 d1hd0a_ d.58.7.1 (A:) Heteroge 99.3 1.6E-12 1.1E-16 94.1 7.5 67 62-135 2-73 (75)
75 d1weza_ d.58.7.1 (A:) Heteroge 99.3 1.9E-12 1.4E-16 98.8 7.6 78 57-141 13-93 (102)
76 d1jmta_ d.58.7.3 (A:) d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=1.3e-26 Score=180.82 Aligned_cols=107 Identities=50% Similarity=0.753 Sum_probs=98.1
Q ss_pred CCCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 56 ~~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
..+++||+|.+.|+++.||+++|+++|++||.|++|+++.++..++|||+|++.++|+.|++.|||..|+++ ++.|+|+
T Consensus 2 ~~~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~-~~~l~v~ 80 (108)
T d2adba1 2 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNA-CCTLRID 80 (108)
T ss_dssp CCCCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTT-CCCCEEE
T ss_pred CCCCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccC-CcEEEEE
Confidence 357889999999999999999999999999999999987655445799999999999999999999999987 6799999
Q ss_pred eeeCCCCceecCCCCCccCCCCCCCCCC
Q 024708 136 YSRHTDLSIKVNNDRSRDYTLPSTPMVN 163 (264)
Q Consensus 136 fSK~~~l~vk~n~~ksrDYT~p~lp~~~ 163 (264)
||+.+.++++++++++|||++|.+|.+|
T Consensus 81 ~s~~~~~~~~~~~~~~rDy~~p~~p~gd 108 (108)
T d2adba1 81 FSKLTSLNVKYNNDKSRDYTRPDLPSGD 108 (108)
T ss_dssp ECSSCSCCCCCTTTTEEESSSSSCCCSC
T ss_pred ecCCccccccccCccCCcCCCCCCCCCC
Confidence 9999999999999999999999998764
No 2
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.2e-20 Score=145.58 Aligned_cols=97 Identities=27% Similarity=0.400 Sum_probs=83.0
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEeee
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 138 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fSK 138 (264)
|+||+|.|+++ +.||+++|+++|+.||.|++|+|..++++ +|||+|++.++|+.|++.|||..|+|+ .|+|+|||
T Consensus 2 ~~~l~V~nL~p-~~~te~~L~~~F~~fG~I~~v~i~~~~kg-~afV~f~~~~~A~~ai~~lng~~l~g~---~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNP-ERVTPQSLFILFGVYGDVQRVKILFNKKE-NALVQMADGNQAQLAMSHLNGHKLHGK---PIRITLSK 76 (109)
T ss_dssp CSEEEEESCCT-TTCCHHHHHHHHHHHTCEEEEEECCTTSC-CEEEEESCHHHHHHHHHHHTTCBCSSS---BCEEECCS
T ss_pred CCEEEEeCCCc-ccCCHHHHHHHHhhccccceEEEEecccc-eEEEEECCHHHHHHHHHHhCCCEECCE---EEEEEECC
Confidence 78999999876 57999999999999999999998765545 699999999999999999999999999 99999999
Q ss_pred CCCCceecC----CCCCccCCCCCCC
Q 024708 139 HTDLSIKVN----NDRSRDYTLPSTP 160 (264)
Q Consensus 139 ~~~l~vk~n----~~ksrDYT~p~lp 160 (264)
...+....+ ...++||++..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~s~~~ 102 (109)
T d2adca1 77 HQNVQLPREGQEDQGLTKDYGNSPLH 102 (109)
T ss_dssp CCCCCCCCSSSSTTTTEEECTTCSSC
T ss_pred CCCCCCCCccccCCCcccccCCCCCC
Confidence 887766543 2356788776543
No 3
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.75 E-value=3.7e-18 Score=126.54 Aligned_cols=80 Identities=19% Similarity=0.330 Sum_probs=71.1
Q ss_pred CCCCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 55 ~~~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
..+|+++|+|.+++ ..+|+++|+++|+.||.|.+|++++++++ +|||+|.|.++|+.|++.|||..|.++ +.|+|
T Consensus 4 ~~pP~~tl~V~nLp--~~~t~~~l~~~f~~~G~i~~v~~~~~~~g-~afV~f~~~~~A~~A~~~l~g~~~~~~--~~i~v 78 (83)
T d2b0ga1 4 EQPPNQILFLTNLP--EETNEMMLSMLFNQFPGFKEVRLVPNRHD-IAFVEFTTELQSNAAKEALQGFKITPT--HAMKI 78 (83)
T ss_dssp CCSCCSEEEEESCC--TTCCHHHHHHHHTTSTTEEEEEECTTTCS-CEEEEESSHHHHHHHHHHHTTCBSSTT--CBCEE
T ss_pred CCCCCCEEEEECCC--CCCCHHHHHhhhccCccEEEeeeecccce-eEEEecCCHHHHHHHHHHhCCcEeCCC--cEEEE
Confidence 35789999999776 58999999999999999999999876655 699999999999999999999999764 38999
Q ss_pred EeeeC
Q 024708 135 SYSRH 139 (264)
Q Consensus 135 ~fSK~ 139 (264)
+|||.
T Consensus 79 ~~akk 83 (83)
T d2b0ga1 79 TFAKK 83 (83)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 99984
No 4
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=7.3e-18 Score=125.82 Aligned_cols=82 Identities=32% Similarity=0.293 Sum_probs=70.1
Q ss_pred CCCCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 55 ~~~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
..+|+++|+|.|++ +.+|+++|+++|+.||.|.+++++.+++..+|||+|++.++|..|+..|||..|.++ +.|+|
T Consensus 6 ~~pPs~tL~V~NLp--~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g--~~l~v 81 (88)
T d2adca2 6 IFPPSATLHLSNIP--PSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGEN--HHLRV 81 (88)
T ss_dssp CCCSCSEEEEECCC--TTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSS--CBCEE
T ss_pred CCCCCCEEEEECCC--CCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCC--CEEEE
Confidence 45789999999765 689999999999999999998866543334699999999999999999999999743 38999
Q ss_pred EeeeCC
Q 024708 135 SYSRHT 140 (264)
Q Consensus 135 ~fSK~~ 140 (264)
+|||.+
T Consensus 82 ~~sk~~ 87 (88)
T d2adca2 82 SFSKST 87 (88)
T ss_dssp EECSSC
T ss_pred EeCCCC
Confidence 999864
No 5
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=7.4e-17 Score=124.23 Aligned_cols=86 Identities=17% Similarity=0.142 Sum_probs=72.8
Q ss_pred CCCCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCC--eeCCCccceE
Q 024708 55 LEPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH--CIYDGGFCKL 132 (264)
Q Consensus 55 ~~~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~--~I~g~~~c~L 132 (264)
..++++||+|.+++ ..+|+++|+++|+.||.|.+|++.+.+ + +|||+|++.++|+.|++.|++. .+.++ +|
T Consensus 11 ~~~ps~~l~v~nlp--~~~te~~l~~~F~~fG~I~~~~~~~~k-~-~AfV~f~~~e~A~~ai~~~~~~~~~~~g~---~l 83 (104)
T d1wexa_ 11 KVSVSPVVHVRGLC--ESVVEADLVEALEKFGTICYVMMMPFK-R-QALVEFENIDSAKECVTFAADVPVYIAGQ---QA 83 (104)
T ss_dssp CCCCCSEEEEESCC--SSCCHHHHHHHHTTTSCEEEEEEETTT-T-EEEEEESSHHHHHHHHHHHHHSCCBSSSS---BC
T ss_pred cCCCCCEEEEeCCC--CCCCHHHHHHhhhhcccceEEEEEecc-e-eEEEEeCCHHHHHHHHHHHcCCCcEEeeE---EE
Confidence 35789999999775 589999999999999999999998655 3 7999999999999999988654 44565 99
Q ss_pred EEEeeeCCCCceecC
Q 024708 133 HISYSRHTDLSIKVN 147 (264)
Q Consensus 133 rV~fSK~~~l~vk~n 147 (264)
+|+||+.+.+....+
T Consensus 84 ~v~~s~~~~~~~~~~ 98 (104)
T d1wexa_ 84 FFNYSTSKRITRPGN 98 (104)
T ss_dssp EEEECSSSSCCCSCC
T ss_pred EEEEcCCCccCCCCC
Confidence 999999887765444
No 6
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=6.9e-17 Score=118.66 Aligned_cols=75 Identities=24% Similarity=0.340 Sum_probs=67.3
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEee
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fS 137 (264)
.+++|+|.++ ++|+++|+++|++||.|.+|++.+.+ + +|||+|++.++|..|++.|||..|.|+ .|+|+||
T Consensus 4 ~~~ti~V~~~----~~te~~L~~~F~~~G~I~~v~~~~~~-~-~afV~f~~~~~A~~Ai~~lng~~~~g~---~l~V~~a 74 (79)
T d2bz2a1 4 KGNTLYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPR-N-CAFVTYEKMESADQAVAELNGTQVESV---QLKVNIA 74 (79)
T ss_dssp CCCEEEEECS----SCCHHHHHHHHSTTCCCSCEEEETTT-T-EEEEECSSHHHHHHHHHHHTTCBCSSC---BCEEEEC
T ss_pred CCCEEEEECC----CCCHHHHHHHHhccCccceeeeccCC-C-EEEEEEcccHHHHHHHHHhCCCEECCE---EEEEEEe
Confidence 4678999864 48999999999999999999997654 4 799999999999999999999999998 9999999
Q ss_pred eCCC
Q 024708 138 RHTD 141 (264)
Q Consensus 138 K~~~ 141 (264)
|.+.
T Consensus 75 ~~~P 78 (79)
T d2bz2a1 75 RKQP 78 (79)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 8754
No 7
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.67 E-value=1.3e-16 Score=121.35 Aligned_cols=80 Identities=19% Similarity=0.254 Sum_probs=70.9
Q ss_pred CCCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 56 ~~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
.+|+++|+|.+++ +.+|+++|+++|++||.|.+|++.+.+ + +|||+|.+.++|+.|++.|||..|.+. .+.|+|+
T Consensus 14 ~~Ps~tl~V~nLp--~~~t~~~l~~~f~~~G~i~~~~~~~~~-~-~afV~f~~~~~A~~A~~~l~~~~i~g~-~~~l~v~ 88 (97)
T d1whya_ 14 ANPTTRLWVGGLG--PNTSLAALAREFDRFGSIRTIDHVKGD-S-FAYIQYESLDAAQAACAKMRGFPLGGP-DRRLRVD 88 (97)
T ss_dssp CCCCSCEEEECCC--SSCCHHHHHHHHHTTSCEEEEEECSSS-C-CEEEEESSHHHHHHHHHHHTTCBCSSS-SCBCEEE
T ss_pred CCCCCEEEEcCCC--CCCCHHHHHHHHHhhcccceEeeeccc-c-EEEeccCCHHHHHHHHHHhCCCEeCCC-ceEEEEE
Confidence 4678999999776 589999999999999999999987654 3 699999999999999999999999876 5689999
Q ss_pred eeeCC
Q 024708 136 YSRHT 140 (264)
Q Consensus 136 fSK~~ 140 (264)
|||..
T Consensus 89 ~ak~~ 93 (97)
T d1whya_ 89 FAKSG 93 (97)
T ss_dssp ECCCC
T ss_pred eCCCC
Confidence 99864
No 8
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2e-16 Score=118.03 Aligned_cols=81 Identities=22% Similarity=0.233 Sum_probs=71.0
Q ss_pred CCCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHh--cCCeeCCCccceEE
Q 024708 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL--EGHCIYDGGFCKLH 133 (264)
Q Consensus 56 ~~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~L--nG~~I~g~~~c~Lr 133 (264)
.+|+++|+|.+++ ..+|+++|+++|+.||.|.+|++...+ + +|||+|++.++|+.|++.+ ++..|.|+ .|+
T Consensus 5 ~~Ps~~l~V~nLp--~~~t~~~L~~~f~~~G~i~~v~~~~~~-~-~afV~f~~~e~A~~a~~~~~~~~~~~~g~---~l~ 77 (88)
T d2cq1a1 5 GAPSRVLHIRKLP--GEVTETEVIALGLPFGKVTNILMLKGK-N-QAFLELATEEAAITMVNYYSAVTPHLRNQ---PIY 77 (88)
T ss_dssp SSCCSEEEEESCC--TTCCHHHHHHTTTTTSCEEEEEEETTT-T-EEEEEESSHHHHHHHHHHHHHSCCEETTE---ECE
T ss_pred CCCCCEEEEeCCC--CCCCHHHHHHHHhcccccccccccccc-e-EEEEEeCCHHHHHHHHHHHccCCCccCCC---EEE
Confidence 4789999999776 589999999999999999999987654 3 7999999999999999976 56788887 999
Q ss_pred EEeeeCCCCc
Q 024708 134 ISYSRHTDLS 143 (264)
Q Consensus 134 V~fSK~~~l~ 143 (264)
|+|||.+.++
T Consensus 78 v~~sk~~~lk 87 (88)
T d2cq1a1 78 IQYSNHKELK 87 (88)
T ss_dssp EEECSCSSCC
T ss_pred EEECCCCCCC
Confidence 9999988764
No 9
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=2.3e-16 Score=120.21 Aligned_cols=77 Identities=17% Similarity=0.353 Sum_probs=69.1
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
+.+++|+|.+++ ..+|+++|+++|+.||.|.+|+|...+ + +|||+|.+.++|+.|++.|||..|.|+ .|+|+|
T Consensus 16 ~~~~~l~v~nL~--~~~te~~L~~~F~~fG~i~~v~i~~~k-g-~afV~f~~~~~A~~Ai~~l~~~~i~g~---~l~v~~ 88 (96)
T d1x4ga1 16 PKNCTVYCGGIA--SGLTDQLMRQTFSPFGQIMEIRVFPEK-G-YSFVRFSTHESAAHAIVSVNGTTIEGH---VVKCYW 88 (96)
T ss_dssp SSCCEEEEECCS--SCCCHHHHHHHHHHHSCEEEEEEETTT-T-EEEEEESSHHHHHHHHHHHTTCEETTE---ECEEEC
T ss_pred CCCCEEEEcCCC--CCCCHHHHHHHHHHhCCceEEEEEecc-e-EEEEEECCHHHHHHHHHHhCCCEECCE---EEEEEE
Confidence 456789999776 589999999999999999999998654 4 799999999999999999999999988 999999
Q ss_pred eeCC
Q 024708 137 SRHT 140 (264)
Q Consensus 137 SK~~ 140 (264)
+|.+
T Consensus 89 ak~~ 92 (96)
T d1x4ga1 89 GKES 92 (96)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9864
No 10
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=4.5e-16 Score=116.21 Aligned_cols=77 Identities=16% Similarity=0.287 Sum_probs=68.3
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEee
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fS 137 (264)
..+.|+|.+++ ..+|+++|.++|+.||.|.+|++.+.+ + +|||+|++.++|+.|++.|||..|.|+ +|+|+||
T Consensus 7 ~~~~l~V~nLp--~~~~~~~l~~~F~~~G~i~~i~~~~~k-~-~afV~f~~~~~A~~A~~~l~g~~i~g~---~l~V~~A 79 (86)
T d2cpja1 7 QRSRLFVGNLP--PDITEEEMRKLFEKYGKAGEVFIHKDK-G-FGFIRLETRTLAEIAKVELDNMPLRGK---QLRVRFA 79 (86)
T ss_dssp CTTEEEEESCC--TTCCHHHHHHHTSTTCCCSEEEEETTT-T-EEEEECSSSHHHHHHHHHHTTCCBTTB---CCEEEES
T ss_pred CCCEEEEECCC--CCCCHHHHHHHHHHhCCceEeeeeccc-c-eEEEEECCHHHHHHHHHHhCCCEECCE---EEEEEEC
Confidence 34578888665 599999999999999999999998654 4 799999999999999999999999987 9999999
Q ss_pred eCCC
Q 024708 138 RHTD 141 (264)
Q Consensus 138 K~~~ 141 (264)
.+..
T Consensus 80 ~~~~ 83 (86)
T d2cpja1 80 CHSA 83 (86)
T ss_dssp SCCS
T ss_pred CCcC
Confidence 8764
No 11
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.62 E-value=7.2e-16 Score=113.03 Aligned_cols=76 Identities=21% Similarity=0.337 Sum_probs=65.8
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
++.|+|.|++ ..+|+++|+++|++||.|.+|++.. +..+ ..|||+|.+.++|+.|++.|||..|.++ .|+|
T Consensus 2 ~t~l~V~nLp--~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~---~l~v 76 (82)
T d1b7fa1 2 NTNLIVNYLP--QDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNK---RLKV 76 (82)
T ss_dssp CSEEEEECCC--TTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTE---ECEE
T ss_pred CCEEEEeCCC--CCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCE---EEEE
Confidence 4679999776 5899999999999999999999643 3211 3699999999999999999999999998 9999
Q ss_pred EeeeC
Q 024708 135 SYSRH 139 (264)
Q Consensus 135 ~fSK~ 139 (264)
+|||+
T Consensus 77 ~~a~p 81 (82)
T d1b7fa1 77 SYARP 81 (82)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99975
No 12
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=1.3e-15 Score=114.10 Aligned_cols=80 Identities=16% Similarity=0.299 Sum_probs=68.8
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCC--CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~--~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
.++++|+|.|++ ..+|+++|+++|+.||.|.+|++.... +..+|||+|.+.++|+.|++.|||..|.|+ .|+|
T Consensus 6 ~~~~tl~V~nLp--~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~---~i~v 80 (90)
T d2cqia1 6 GQPRTLYVGNLS--RDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGK---EVKV 80 (90)
T ss_dssp CCCCEEEEESCC--TTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTE---EEEE
T ss_pred CCCCEEEEECCC--CCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCE---EEEE
Confidence 456789999775 599999999999999999999975322 123699999999999999999999999998 9999
Q ss_pred EeeeCCC
Q 024708 135 SYSRHTD 141 (264)
Q Consensus 135 ~fSK~~~ 141 (264)
+||+...
T Consensus 81 ~~a~~~~ 87 (90)
T d2cqia1 81 NWATTPS 87 (90)
T ss_dssp EECCCTT
T ss_pred EEcCCCC
Confidence 9998654
No 13
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=6.7e-16 Score=118.69 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=68.8
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEee
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fS 137 (264)
.+++|+|.|++ +.+|+++|.++|+.||.|.+|+|.+.+ + +|||+|.+.++|+.|++.|||..|.++ +|+|+|+
T Consensus 9 ~~~~l~V~nLp--~~~t~~~L~~~F~~fG~I~~v~l~~~k-g-~afV~f~~~~~A~~A~~~lng~~~~gr---~l~v~~a 81 (111)
T d1whxa_ 9 SKTVILAKNLP--AGTLAAEIQETFSRFGSLGRVLLPEGG-I-TAIVEFLEPLEARKAFRHLAYSKFHHV---PLYLEWA 81 (111)
T ss_dssp EEEEEEEESCC--TTCCHHHHHHHHHTTSCEEEEECCSSS-S-CEEEEESCHHHHHHHHHHHTTCBSSSS---BCEEEEE
T ss_pred CCCEEEEECCC--CCCCHHHHHhhhhccCCccEEEeeccC-c-eEEEEEcCHHHHHHHHHHHcCCccCCC---eEEEEEC
Confidence 35789999775 589999999999999999999986443 4 699999999999999999999999998 9999999
Q ss_pred eCCCC
Q 024708 138 RHTDL 142 (264)
Q Consensus 138 K~~~l 142 (264)
+....
T Consensus 82 ~~~~~ 86 (111)
T d1whxa_ 82 PIGVF 86 (111)
T ss_dssp ETTTT
T ss_pred CCCcc
Confidence 77653
No 14
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=1.3e-15 Score=118.18 Aligned_cols=78 Identities=22% Similarity=0.373 Sum_probs=68.3
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCC--CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~--~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
..+++|+|.||+ +.+|+++|+++|+.||.|++|++.... +| +|||+|.+.++|..|++.|||..|.|+ .|+|
T Consensus 5 ~~~r~l~V~nLp--~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG-~afV~f~~~~~A~~Ai~~l~g~~~~gr---~l~V 78 (114)
T d2f9da1 5 EVNRILYIRNLP--YKITAEEMYDIFGKYGPIRQIRVGNTPETRG-TAYVVYEDIFDAKNACDHLSGFNVCNR---YLVV 78 (114)
T ss_dssp TCCSEEEEESCC--TTCCHHHHHHHHHTTSCEEEEEEECSTTTTT-EEEEEESSHHHHHHHHHHHTTCEETTE---ECEE
T ss_pred CCCCEEEEECCC--CCCCHHHHHHHHhhcCCeEeecccccCCcCC-eEEEEECCHHHHHHHHHHhCCCEECCE---EEEE
Confidence 457899999765 699999999999999999999986432 34 699999999999999999999999998 9999
Q ss_pred EeeeCC
Q 024708 135 SYSRHT 140 (264)
Q Consensus 135 ~fSK~~ 140 (264)
+|++..
T Consensus 79 ~~a~~~ 84 (114)
T d2f9da1 79 LYYNAN 84 (114)
T ss_dssp EECCHH
T ss_pred EEcCCC
Confidence 998653
No 15
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.61 E-value=1e-15 Score=114.47 Aligned_cols=78 Identities=23% Similarity=0.350 Sum_probs=66.7
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
++.+|+|.|++ ..+|+++|.++|+.||.|.+|++.. +..+ ..|||+|.+.++|+.|++.|||..|.|+ +|+
T Consensus 6 ~~~~l~V~nL~--~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~---~l~ 80 (88)
T d1rk8a_ 6 EGWILFVTSIH--EEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQ---TIQ 80 (88)
T ss_dssp -CEEEEEESCC--TTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTE---ECE
T ss_pred CCCEEEEeCCC--CCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCE---EEE
Confidence 46799999776 5899999999999999999999753 3211 2599999999999999999999999988 999
Q ss_pred EEeeeCC
Q 024708 134 ISYSRHT 140 (264)
Q Consensus 134 V~fSK~~ 140 (264)
|+||+.+
T Consensus 81 V~~a~~k 87 (88)
T d1rk8a_ 81 VDWCFVK 87 (88)
T ss_dssp EEESEEC
T ss_pred EEEecCC
Confidence 9999753
No 16
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=5.7e-16 Score=115.90 Aligned_cols=80 Identities=18% Similarity=0.288 Sum_probs=69.2
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CC----CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccce
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KN----GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 131 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~----~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~ 131 (264)
..+++|+|.|++ +.+|+++|+++|+.||.|.+|++.. +. +| .|||+|.+.++|+.|++.|||..|.|+ .
T Consensus 3 ~~~~tlfV~nLp--~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg-~afV~f~~~~~A~~ai~~l~~~~i~g~---~ 76 (89)
T d2cqba1 3 TTKRVLYVGGLA--EEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRG-FAFVEFELAEDAAAAIDNMNESELFGR---T 76 (89)
T ss_dssp CCCSCEEEESCC--SSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSS-EEEECCSSHHHHHHHHHHHTTEEETTE---E
T ss_pred CCCcEEEEeCCC--CcCCHHHHHHHHhhCCeEEecccccccccccccc-eeEEEECCHHHHHHHHHHcCCCEECCE---E
Confidence 356899999776 5999999999999999999999743 22 23 699999999999999999999999998 9
Q ss_pred EEEEeeeCCCC
Q 024708 132 LHISYSRHTDL 142 (264)
Q Consensus 132 LrV~fSK~~~l 142 (264)
|+|+||+...+
T Consensus 77 l~v~~a~p~~~ 87 (89)
T d2cqba1 77 IRVNLAKPMRI 87 (89)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEEeCCCCC
Confidence 99999987643
No 17
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.8e-15 Score=110.71 Aligned_cols=76 Identities=20% Similarity=0.326 Sum_probs=65.4
Q ss_pred cEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 60 ~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
..|+|.|++ ..+|+++|+++|+.||.|.+|++.. +..+ ..|||+|.+.++|+.|++.|||..|.|+ .|+|+
T Consensus 3 t~l~V~nLp--~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~---~l~v~ 77 (82)
T d1fxla1 3 TNLIVNYLP--QNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK---TIKVS 77 (82)
T ss_dssp SEEEEESCC--TTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTE---ECEEE
T ss_pred CEEEEECCC--CCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCE---EEEEE
Confidence 358888665 6999999999999999999999753 2211 3699999999999999999999999998 99999
Q ss_pred eeeCC
Q 024708 136 YSRHT 140 (264)
Q Consensus 136 fSK~~ 140 (264)
|||+.
T Consensus 78 ~AkPs 82 (82)
T d1fxla1 78 YARPS 82 (82)
T ss_dssp ECCCC
T ss_pred EeeCc
Confidence 99863
No 18
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.60 E-value=1.3e-15 Score=114.66 Aligned_cols=78 Identities=13% Similarity=0.118 Sum_probs=67.5
Q ss_pred CCCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHh--cCCeeCCCccceEE
Q 024708 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEAL--EGHCIYDGGFCKLH 133 (264)
Q Consensus 56 ~~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~L--nG~~I~g~~~c~Lr 133 (264)
..+++||+|.+++. ..+|+++|.+||+.||.|.+|++...++ +|||+|++.++|..|++.| ++..+.|+ +|+
T Consensus 5 ~~~sr~v~v~nl~~-~~~t~~eL~~lF~~fG~I~~i~i~~~k~--~afV~f~~~~~A~~A~~~l~~~~~~~~gr---~l~ 78 (89)
T d1x4da1 5 VETRRVVHIMDFQR-GKNLRYQLLQLVEPFGVISNHLILNKIN--EAFIEMATTEDAQAAVDYYTTTPALVFGK---PVR 78 (89)
T ss_dssp CCCCCEEEEESCCC-SSSHHHHHHTTTGGGSCEEEEEECSSSS--CEEEEESSHHHHHHHHHHHHHSCCEETTE---ECE
T ss_pred CCCCcEEEEECCCC-CcCCHHHHHHHHHhhCCeEEEEeeccce--EEEEEEcchhhHHHHHHHHhhCCCccCCc---eEE
Confidence 35689999998763 3589999999999999999999876543 6999999999999999977 56678888 999
Q ss_pred EEeeeC
Q 024708 134 ISYSRH 139 (264)
Q Consensus 134 V~fSK~ 139 (264)
|+||+.
T Consensus 79 V~~s~~ 84 (89)
T d1x4da1 79 VHLSQK 84 (89)
T ss_dssp EEEECC
T ss_pred EEECCC
Confidence 999974
No 19
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=2.8e-15 Score=113.32 Aligned_cols=79 Identities=15% Similarity=0.218 Sum_probs=68.0
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCC-CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN-GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~-~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
..++.|+|.+++ +.+|+++|+++|+.||.|..|++..+. ....|||+|++.++|+.|++.|||..|.++ +|+|+
T Consensus 12 ~~~~~l~V~nLp--~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~---~l~V~ 86 (95)
T d1x4aa1 12 NNDCRIYVGNLP--PDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGY---RLRVE 86 (95)
T ss_dssp CCSSEEEEESCC--TTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTE---ECEEE
T ss_pred CCCCEEEEECCC--CCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCE---EEEEE
Confidence 345689999765 689999999999999999999875432 123699999999999999999999999998 99999
Q ss_pred eeeCC
Q 024708 136 YSRHT 140 (264)
Q Consensus 136 fSK~~ 140 (264)
|+|..
T Consensus 87 ~a~~~ 91 (95)
T d1x4aa1 87 FPRSG 91 (95)
T ss_dssp CCCCC
T ss_pred eccCC
Confidence 99864
No 20
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.8e-15 Score=113.19 Aligned_cols=80 Identities=14% Similarity=0.191 Sum_probs=68.8
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CC----CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccce
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KN----GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 131 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~----~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~ 131 (264)
.+++.|+|.+++ +.+|+++|+++|+.||.|.+|++.. +. ++ +|||+|.+.++|+.|++.|||..|.|+ .
T Consensus 7 ~~~~tlfV~nLp--~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg-~afV~f~~~~~A~~Ai~~l~g~~~~g~---~ 80 (93)
T d1x5ua1 7 NQDATVYVGGLD--EKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQG-YGFVEFLSEEDADYAIKIMDMIKLYGK---P 80 (93)
T ss_dssp CTTTEEEEECCC--TTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCS-CEEEEESSHHHHHHHHHHSSSCBCSSC---B
T ss_pred CCCCEEEEeCCC--CcCCHHHHHHHHHHhCCccccceeeccccccccc-ceEEEECCHHHHHHHHHHcCCCEECCE---E
Confidence 345789998776 5999999999999999999999743 22 23 699999999999999999999999998 9
Q ss_pred EEEEeeeCCCC
Q 024708 132 LHISYSRHTDL 142 (264)
Q Consensus 132 LrV~fSK~~~l 142 (264)
|+|+||+..+-
T Consensus 81 l~V~~A~~~~~ 91 (93)
T d1x5ua1 81 IRVNKASAHNK 91 (93)
T ss_dssp CEEEETTTTSC
T ss_pred EEEEEcCCCCC
Confidence 99999987653
No 21
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.6e-15 Score=116.08 Aligned_cols=75 Identities=20% Similarity=0.291 Sum_probs=66.6
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEee
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fS 137 (264)
.+..|+|.|++. +.+++++|+++|++||.|++|+|. + + +|||+|++.++|+.|++.|||..|.|+ +|+|+||
T Consensus 14 ~~~~lfV~nL~~-~~~~~~~L~~~F~~~G~i~~~~i~--r-g-~aFV~f~~~~~A~~Ai~~lng~~~~g~---~l~V~~a 85 (98)
T d1wf2a_ 14 MNSRVFIGNLNT-LVVKKSDVEAIFSKYGKIVGCSVH--K-G-FAFVQYVNERNARAAVAGEDGRMIAGQ---VLDINLA 85 (98)
T ss_dssp CCCCEEEEEECT-TTCCHHHHHHSSTTSSCEEEEEEE--T-E-EEEEEESSHHHHHHHHHTTTTCEETTE---ECEEEET
T ss_pred CCcEEEEeCCCc-ccCCHHHHHHHHhhcCCEEEEEEe--C-C-eEEEEECCHHHHHHHHHHcCCCEECCE---EEEEEEC
Confidence 456799998875 578899999999999999999984 2 3 699999999999999999999999998 9999998
Q ss_pred eCC
Q 024708 138 RHT 140 (264)
Q Consensus 138 K~~ 140 (264)
+..
T Consensus 86 ~~~ 88 (98)
T d1wf2a_ 86 AEP 88 (98)
T ss_dssp TSC
T ss_pred CCC
Confidence 754
No 22
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.2e-15 Score=112.83 Aligned_cols=79 Identities=16% Similarity=0.238 Sum_probs=67.8
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
++++|+|.+++ ..+|+++|+++|+.||.|.+|++.. +..+ ..|||+|.+.++|+.|++.|||..|.|+ +|+
T Consensus 7 ~~~~i~V~nLp--~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~---~i~ 81 (90)
T d2cq0a1 7 DNATIRVTNLS--EDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHL---ILN 81 (90)
T ss_dssp SSEEEEEESCC--TTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTE---ECE
T ss_pred CCCEEEEECCC--CCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCE---EEE
Confidence 45789998765 5999999999999999999999753 3211 2699999999999999999999999998 999
Q ss_pred EEeeeCCC
Q 024708 134 ISYSRHTD 141 (264)
Q Consensus 134 V~fSK~~~ 141 (264)
|+|||+.+
T Consensus 82 v~~akp~~ 89 (90)
T d2cq0a1 82 VEWAKPST 89 (90)
T ss_dssp EEESSCCC
T ss_pred EEeeeCCC
Confidence 99998753
No 23
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.9e-15 Score=114.20 Aligned_cols=81 Identities=22% Similarity=0.290 Sum_probs=69.6
Q ss_pred CCCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEE-cCCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccce
Q 024708 56 EPESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF-DKNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 131 (264)
Q Consensus 56 ~~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif-~K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~ 131 (264)
.++++.|+|.|++ +.+|+++|+++|+.||.|.+|++. ++..+ ..|||+|.+.++|+.|++.|||..|.++ .
T Consensus 15 ~p~~~~l~V~nLp--~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~---~ 89 (102)
T d2cpza1 15 GPEGANLFIYHLP--QEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMK---R 89 (102)
T ss_dssp CSTTCCEEEESCC--SSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTE---E
T ss_pred CCCCCEEEEeCCC--CCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCE---E
Confidence 4667789999765 699999999999999999999864 33322 3699999999999999999999999998 9
Q ss_pred EEEEeeeCCC
Q 024708 132 LHISYSRHTD 141 (264)
Q Consensus 132 LrV~fSK~~~ 141 (264)
|+|+|++..+
T Consensus 90 i~V~~a~~k~ 99 (102)
T d2cpza1 90 LKVQLKRSKN 99 (102)
T ss_dssp CEEECCCCSC
T ss_pred EEEEEeCCCC
Confidence 9999998765
No 24
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.3e-15 Score=110.67 Aligned_cols=78 Identities=14% Similarity=0.247 Sum_probs=67.9
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
...++|+|.|++ +.+|+++|+++|+.||.|..+++...+ + +|||+|.+.++|..|++.|||..|.|+ .|+|+|
T Consensus 6 ~~~k~l~V~nLp--~~~te~~l~~~F~~~g~i~~~~~~~~r-g-~afV~f~~~~~A~~Ai~~l~~~~i~g~---~i~V~~ 78 (86)
T d2cpda1 6 SSVKILYVRNLM--LSTSEEMIEKEFNNIKPGAVERVKKIR-D-YAFVHFSNREDAVEAMKALNGKVLDGS---PIEVTL 78 (86)
T ss_dssp SCCCEEEEESCC--TTCCHHHHHHHHHTTSTTCEEEEEECS-S-EEEEEESSHHHHHHHHHHHSSEEETTE---EEEEEC
T ss_pred cCCCEEEEcCCC--CCCCHHHHHHhhcccceeeeEEEcccc-E-EEEEEeCCHHHHHHHHHHcCCCEECCE---EEEEEe
Confidence 346899999775 699999999999999999888775433 4 699999999999999999999999998 999999
Q ss_pred eeCCC
Q 024708 137 SRHTD 141 (264)
Q Consensus 137 SK~~~ 141 (264)
||+.+
T Consensus 79 akP~~ 83 (86)
T d2cpda1 79 AKPVD 83 (86)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 98653
No 25
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.6e-15 Score=110.16 Aligned_cols=74 Identities=20% Similarity=0.166 Sum_probs=64.7
Q ss_pred EEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 61 VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
.|+|.|++ +.+|+++|.++|+.||.|.+|+|.. +..+ ..|||+|.+.++|..|++.|||..|.|+ .|+|+|
T Consensus 2 slfV~nL~--~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr---~i~v~~ 76 (80)
T d1cvja1 2 SLYVGDLH--PDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGK---PVRIMW 76 (80)
T ss_dssp EEEEESCC--TTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTE---ECEEEE
T ss_pred EEEEeCCC--CcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCE---EEEEEE
Confidence 48888766 5999999999999999999999764 3211 3799999999999999999999999998 999999
Q ss_pred eeC
Q 024708 137 SRH 139 (264)
Q Consensus 137 SK~ 139 (264)
|+.
T Consensus 77 a~~ 79 (80)
T d1cvja1 77 SQR 79 (80)
T ss_dssp CCC
T ss_pred eCC
Confidence 975
No 26
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.57 E-value=2.8e-15 Score=114.67 Aligned_cols=78 Identities=10% Similarity=0.098 Sum_probs=67.0
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHH--HhcCCeeCCCccceEEE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKE--ALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~--~LnG~~I~g~~~c~LrV 134 (264)
.++++|+|+|++. ..+|+++|+++|+.||.|.+|++...+ + +|||+|++.++|..|++ .+++..|.|+ .|+|
T Consensus 16 ~~~~~l~v~nLp~-~~~te~~l~~~F~~fG~V~~v~~~~~k-~-~afV~f~~~~~A~~Ai~~~~~~~~~~~gr---~l~V 89 (99)
T d1x4fa1 16 ELGRVIHLSNLPH-SGYSDSAVLKLAEPYGKIKNYILMRMK-S-QAFIEMETREDAMAMVDHCLKKALWFQGR---CVKV 89 (99)
T ss_dssp CCCCEEEEESCCC-SSCCSHHHHTTTTTTSCCSEEEEETTT-T-EEEEECSSHHHHHHHHHHHHHSCCCSSSS---CCEE
T ss_pred CCCCEEEEeCCcC-CccCHHHHHhhhccccceeEEEEeecC-C-cEEEEecchHHHHHHHHHHhcCCceECCE---EEEE
Confidence 4678999997763 359999999999999999999998654 3 79999999999999998 4678788898 9999
Q ss_pred EeeeCC
Q 024708 135 SYSRHT 140 (264)
Q Consensus 135 ~fSK~~ 140 (264)
+||+..
T Consensus 90 ~~s~~~ 95 (99)
T d1x4fa1 90 DLSEKY 95 (99)
T ss_dssp EEECSC
T ss_pred EEcCCc
Confidence 999643
No 27
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1e-14 Score=110.01 Aligned_cols=79 Identities=19% Similarity=0.153 Sum_probs=68.0
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~L 132 (264)
..+++|+|.|++ +.+|+++|.++|+.||.|.+|++.. +..+ ..|||+|.+.++|+.|++.|||..|.|+ .|
T Consensus 5 ~~s~tlfV~nlp--~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr---~i 79 (93)
T d1h2vz_ 5 KKSCTLYVGNLS--FYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDR---II 79 (93)
T ss_dssp TTCCEEEEESCC--TTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTE---EC
T ss_pred CCCCEEEEeCCC--CCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCE---EE
Confidence 467899999776 5899999999999999999999743 3221 2699999999999999999999999998 99
Q ss_pred EEEeeeCC
Q 024708 133 HISYSRHT 140 (264)
Q Consensus 133 rV~fSK~~ 140 (264)
+|+|++..
T Consensus 80 ~V~~a~~~ 87 (93)
T d1h2vz_ 80 RTDWDAGF 87 (93)
T ss_dssp EEEEESCC
T ss_pred EEEEcCCC
Confidence 99998643
No 28
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=9e-15 Score=111.11 Aligned_cols=80 Identities=21% Similarity=0.233 Sum_probs=67.6
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCC---CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNG---GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~---g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~L 132 (264)
..++.|+|.|++ +.+|+++|+++|+.||.|.+|+|.. +.. ...|||+|.+.++|+.|++.|||..|.++ .|
T Consensus 6 ~~~~~lfV~nL~--~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr---~i 80 (99)
T d1whwa_ 6 SGSGRLFVRNLS--YTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGR---ML 80 (99)
T ss_dssp CSCEEEEEECCC--TTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSC---EE
T ss_pred CCCCEEEEECCC--CcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCE---EE
Confidence 345679998765 6999999999999999999999743 221 13699999999999999999999999998 99
Q ss_pred EEEeeeCCC
Q 024708 133 HISYSRHTD 141 (264)
Q Consensus 133 rV~fSK~~~ 141 (264)
+|++++...
T Consensus 81 ~V~~a~~~~ 89 (99)
T d1whwa_ 81 HVLPSTIKK 89 (99)
T ss_dssp EEEECCCCS
T ss_pred EEEECCCCC
Confidence 999988654
No 29
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=5.4e-15 Score=114.51 Aligned_cols=81 Identities=14% Similarity=0.209 Sum_probs=68.0
Q ss_pred CCCcEEEEEEccCC---cccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 57 PESNVLLASIENMQ---YAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 57 ~~s~VL~V~~lN~~---~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
..++.|+|.|++.. .+++.++|.++|+.||.|.++++++.+ + +|||+|++.++|+.|++.|||..|.|+ .|+
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~~-~-~afV~f~~~~~A~~Ai~~lng~~~~g~---~l~ 77 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKSF-K-RVRINFSNPLSAADARLRLHKTEFLGK---EMK 77 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETTT-T-EEEEECSSTTHHHHHHHTSTTSEETTE---ECE
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecCC-C-EEEEEECCHHHHHHHHHHhcccccCCC---EeE
Confidence 34678999999852 123346799999999999999998644 3 799999999999999999999999998 999
Q ss_pred EEeeeCCCC
Q 024708 134 ISYSRHTDL 142 (264)
Q Consensus 134 V~fSK~~~l 142 (264)
|+|++....
T Consensus 78 v~~a~~~~~ 86 (104)
T d1weya_ 78 LYFAQTLHI 86 (104)
T ss_dssp EECCCCSSC
T ss_pred EeecccCCC
Confidence 999976543
No 30
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.56 E-value=3.8e-15 Score=109.02 Aligned_cols=74 Identities=16% Similarity=0.013 Sum_probs=64.1
Q ss_pred cEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcC-----CCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK-----NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 60 ~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K-----~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
++|+|.|++ +.+|+++|.++|+.||.|.+++++.+ .++ .|||+|.+.++|+.|++.|||..|.|+ +|+|
T Consensus 2 ~tl~v~nLp--~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g-~afV~f~~~e~A~~Ai~~l~g~~~~g~---~i~V 75 (81)
T d2ghpa1 2 CTLWMTNFP--PSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRR-FAYIDVTSKEDARYCVEKLNGLKIEGY---TLVT 75 (81)
T ss_dssp CEEEEECCC--TTCCHHHHHHHHHHTTCCCCEEECC-------CC-EEEEECSSHHHHHHHHHHHTTCEETTE---ECEE
T ss_pred cEEEEECCC--CcCCHHHHHHHHHHhCcEEeeeeecccccccccc-eeEEEECCHHHHHHHHHHhCCCEECCE---EEEE
Confidence 478998775 69999999999999999998876432 223 599999999999999999999999998 9999
Q ss_pred EeeeC
Q 024708 135 SYSRH 139 (264)
Q Consensus 135 ~fSK~ 139 (264)
+||++
T Consensus 76 ~~a~P 80 (81)
T d2ghpa1 76 KVSNP 80 (81)
T ss_dssp EECCC
T ss_pred EEccC
Confidence 99975
No 31
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=8.3e-15 Score=108.70 Aligned_cols=76 Identities=17% Similarity=0.185 Sum_probs=64.2
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
++.|+|.+++ ..+|+++|+++|++||.|.+|++.. +..+ .+|||+|.+.++|+.|++.|||..+.|+ ..+|+|
T Consensus 6 ~~~lfV~nLp--~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~-~~~i~V 82 (85)
T d1fxla2 6 DANLYVSGLP--KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGA-TEPITV 82 (85)
T ss_dssp TCEEEEESCC--TTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTC-SSCCEE
T ss_pred CCEEEEeCCC--CCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCC-CEEEEE
Confidence 4579999776 5899999999999999999999753 3211 3699999999999999999999999986 346999
Q ss_pred Eee
Q 024708 135 SYS 137 (264)
Q Consensus 135 ~fS 137 (264)
+||
T Consensus 83 ~~A 85 (85)
T d1fxla2 83 KFA 85 (85)
T ss_dssp EEC
T ss_pred EeC
Confidence 986
No 32
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.8e-15 Score=111.77 Aligned_cols=78 Identities=24% Similarity=0.433 Sum_probs=67.3
Q ss_pred CCcEEEEEEccCCcccCHHHHH----HHHhccCCeeEEEEEcC--CCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccce
Q 024708 58 ESNVLLASIENMQYAVTLDVLH----MVFSAFGPVQKIAMFDK--NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 131 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~----~LFs~yG~V~rIkif~K--~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~ 131 (264)
|+++|+|.|++ ..+|+++|. ++|+.||+|.+|++.+. .++ +|||+|++.++|+.|++.|||..|.|+ .
T Consensus 2 P~~tl~V~nLp--~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g-~afV~F~~~~~A~~A~~~~~~~~~~g~---~ 75 (91)
T d1nu4a_ 2 PNHTIYINNLN--EKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRG-QAFVIFKEVSSATNALRSMQGFPFYDK---P 75 (91)
T ss_dssp CCSEEEEESCC--TTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTT-CEEEEESSHHHHHHHHHHHTTCEETTE---E
T ss_pred CCCEEEEeCCC--CCCCHHHHHHHHHHHhcccccccceEEeeeccCCC-ceEEEECCHHHHHHHHHHhCCCEECCE---E
Confidence 68899999776 589998874 57999999999998542 234 699999999999999999999999998 9
Q ss_pred EEEEeeeCCC
Q 024708 132 LHISYSRHTD 141 (264)
Q Consensus 132 LrV~fSK~~~ 141 (264)
|+|+|||..+
T Consensus 76 l~v~~ak~~~ 85 (91)
T d1nu4a_ 76 MRIQYAKTDS 85 (91)
T ss_dssp CEEEECSSCC
T ss_pred EEEEEeCCCc
Confidence 9999998764
No 33
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3.8e-15 Score=111.51 Aligned_cols=77 Identities=10% Similarity=0.067 Sum_probs=64.3
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEee
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fS 137 (264)
.++.|+|.|++ +.+|+++|+++|+.|| +..+.+...+ + +|||+|++.++|+.|++.|||..|.|+ +|+|+|+
T Consensus 4 ~s~~i~V~nLp--~~~t~~~l~~lF~~~G-~~~~~~~~~k-g-~afV~f~~~~~A~~Ai~~ln~~~~~G~---~l~V~~a 75 (88)
T d1wg1a_ 4 GSSGILVKNLP--QDSNCQEVHDLLKDYD-LKYCYVDRNK-R-TAFVTLLNGEQAQNAIQMFHQYSFRGK---DLIVQLQ 75 (88)
T ss_dssp CCCCEEEESCC--SSCCHHHHHHHTCSSC-CCCEEEEGGG-T-EEEECCSCHHHHHHHHHHHTTEEETTE---EEEEEEC
T ss_pred CCCEEEEeCCC--CccChHHHHHHHHhcC-ceeeeeeccC-C-ceEEEECCHHHHHHHHHHhCCCEECCE---EEEEEEc
Confidence 46789999776 6999999999999999 3333443333 4 699999999999999999999999998 9999999
Q ss_pred eCCCC
Q 024708 138 RHTDL 142 (264)
Q Consensus 138 K~~~l 142 (264)
+....
T Consensus 76 ~~~~~ 80 (88)
T d1wg1a_ 76 PTDAL 80 (88)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 77653
No 34
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.2e-14 Score=109.50 Aligned_cols=78 Identities=15% Similarity=0.224 Sum_probs=67.2
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCC--CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG--GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~--g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
..+.|+|.+++ +.+|+++|+++|+.||.|.+|+++...+ ...|||+|.+.++|+.|++.|||..|.|+ .|+|+
T Consensus 10 ~~~~l~v~nLp--~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~---~l~V~ 84 (93)
T d2cq3a1 10 TPKRLHVSNIP--FRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGR---KIEVN 84 (93)
T ss_dssp CCCEEEEESCC--TTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTE---ECEEE
T ss_pred CCCEEEEECCC--CCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCE---EEEEE
Confidence 34578888665 6999999999999999999999764321 23699999999999999999999999998 99999
Q ss_pred eeeCC
Q 024708 136 YSRHT 140 (264)
Q Consensus 136 fSK~~ 140 (264)
||+.+
T Consensus 85 ~A~~r 89 (93)
T d2cq3a1 85 NATAR 89 (93)
T ss_dssp ECCSS
T ss_pred ecCcC
Confidence 99875
No 35
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=1e-14 Score=110.30 Aligned_cols=79 Identities=16% Similarity=0.264 Sum_probs=67.3
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcC-C----CCceEEEEeCCHHHHHHHHHHh-cCCeeCCCccce
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK-N----GGLQALIQYPDVQTAVVAKEAL-EGHCIYDGGFCK 131 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K-~----~g~~AfVqF~d~e~A~~A~~~L-nG~~I~g~~~c~ 131 (264)
.++.|+|.|++ +.+|+++|..+|+.||.|.+|+|..+ + ....|||+|.+.++|+.|++.| ||..|.|+ .
T Consensus 7 ~~~~l~V~nLp--~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr---~ 81 (94)
T d2cpha1 7 TTSKILVRNIP--FQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGR---R 81 (94)
T ss_dssp CCCCEEEESCC--TTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSC---B
T ss_pred CCCEEEEeCCC--CCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCE---E
Confidence 45679998765 68999999999999999999997532 1 1136999999999999999999 89999998 9
Q ss_pred EEEEeeeCCC
Q 024708 132 LHISYSRHTD 141 (264)
Q Consensus 132 LrV~fSK~~~ 141 (264)
|+|+||+.+.
T Consensus 82 l~V~~A~~~~ 91 (94)
T d2cpha1 82 LVLEWADSEV 91 (94)
T ss_dssp CEEEECCCCC
T ss_pred EEEEEcCCCC
Confidence 9999998754
No 36
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54 E-value=1.1e-14 Score=106.44 Aligned_cols=72 Identities=21% Similarity=0.286 Sum_probs=62.4
Q ss_pred EEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCC--CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEeee
Q 024708 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNG--GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 138 (264)
Q Consensus 62 L~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~--g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fSK 138 (264)
|+|.|++ +.+|+++|.++|+.||.|.+|++.. +++ ...|||+|.+.++|+.|++.|||..|.|+ +|+|+++.
T Consensus 3 l~V~nLp--~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~---~l~V~~a~ 77 (78)
T d1no8a_ 3 LLVSNLD--FGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGR---PMNIQLVT 77 (78)
T ss_dssp EEEESCC--TTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTE---ECEEEEEC
T ss_pred EEEECCC--CCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCE---EEEEEEee
Confidence 7777665 6999999999999999999999753 321 13699999999999999999999999998 99999985
No 37
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=6.1e-15 Score=110.16 Aligned_cols=76 Identities=17% Similarity=0.260 Sum_probs=66.1
Q ss_pred cEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCC---CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN---GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 60 ~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~---~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
..|+|.|++ +.+|+++|.++|+.||.|.+++|...+ ++ .|||+|++.++|+.|++.|||..|.|+ .|+|++
T Consensus 9 ~~l~V~nLp--~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg-~afV~f~~~~~A~~Ai~~l~g~~~~g~---~i~V~~ 82 (89)
T d1cvja2 9 GNIFIKNLD--KSIDNKALYDTFSAFGNILSCKVVCDENGSKG-YGFVHFETQEAAERAIEKMNGMLLNDR---KVFVGR 82 (89)
T ss_dssp TEEEEESCC--SSCCHHHHHHHHHTTSCEEEEEECCBTTBCCS-CEEEEESCHHHHHHHTTSSSEEEETTE---EEEEEE
T ss_pred CEEEEeCCC--CCCCHHHHHHHHHhcCCceEEEEEeecCCCcc-eeEEEECCHHHHHHHHHHcCCCEECCE---EEEEEE
Confidence 458888665 699999999999999999999975432 24 599999999999999999999999998 999999
Q ss_pred eeCCC
Q 024708 137 SRHTD 141 (264)
Q Consensus 137 SK~~~ 141 (264)
++...
T Consensus 83 a~~~~ 87 (89)
T d1cvja2 83 FKSRK 87 (89)
T ss_dssp CCCTT
T ss_pred CCCCC
Confidence 98654
No 38
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.54 E-value=1.2e-14 Score=116.41 Aligned_cols=79 Identities=15% Similarity=0.268 Sum_probs=67.2
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCC---CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNG---GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~---g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
.++.|+|.+|+ +.+|+++|+++|+.||.|++|+|.. ++. ..+|||+|.+.++|+.|++.|||..|.|+ .|+
T Consensus 41 ~~~~l~V~nLp--~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr---~l~ 115 (139)
T d1u6fa1 41 VLRNLMVNYIP--TTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNK---RLK 115 (139)
T ss_dssp TTSEEEEESCS--TTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSC---EEE
T ss_pred CCCEEEEeCCC--CCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCE---EEE
Confidence 34689998776 5899999999999999999998753 321 13699999999999999999999999999 999
Q ss_pred EEeeeCCC
Q 024708 134 ISYSRHTD 141 (264)
Q Consensus 134 V~fSK~~~ 141 (264)
|+||+...
T Consensus 116 V~~a~~~~ 123 (139)
T d1u6fa1 116 VALAASGH 123 (139)
T ss_dssp EEESSCCC
T ss_pred EEEcCCCC
Confidence 99987543
No 39
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=2.3e-14 Score=104.35 Aligned_cols=73 Identities=16% Similarity=0.153 Sum_probs=62.1
Q ss_pred EEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEeeeCCC
Q 024708 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTD 141 (264)
Q Consensus 62 L~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fSK~~~ 141 (264)
|+|+|++ +.+|+++|+++|++|| +..+++- ++++ .|||+|.+.++|++|++.|||..+.|+ +|+|+|++.+.
T Consensus 1 i~V~nLp--~~~t~~~l~~~F~~~g-~~~~~~~-~~~g-~afv~f~~~~~A~~Ai~~ln~~~~~g~---~l~V~~a~~d~ 72 (75)
T d1wi6a1 1 ILIRGLP--GDVTNQEVHDLLSDYE-LKYCFVD-KYKG-TAFVTLLNGEQAEAAINTFHQSRLRER---ELSVQLQPTDA 72 (75)
T ss_dssp EEEECCC--TTCCHHHHHHHTTTSC-EEEEEEE-TTTT-EEEEEESSHHHHHHHHHHHTTEESSSC---EEEEEECCSTT
T ss_pred CEEeCCC--CcCCHHHHHHHHhccc-ccceeec-ccce-eEEEEECCHHHHHHHHHHhCCccCCCC---EEEEEEeCCCC
Confidence 5677655 6999999999999999 5555554 3434 699999999999999999999999999 99999998876
Q ss_pred C
Q 024708 142 L 142 (264)
Q Consensus 142 l 142 (264)
+
T Consensus 73 ~ 73 (75)
T d1wi6a1 73 L 73 (75)
T ss_dssp C
T ss_pred c
Confidence 4
No 40
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.9e-14 Score=105.79 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=62.7
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~L 132 (264)
.++++|+|.+++ +.+|+++|+++|+.||.|.+|+|.. +..+ ..|||+|.+.++|+.|++.|||..|.|+ .|
T Consensus 7 ~~~~~l~V~nL~--~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr---~i 81 (83)
T d2cqca1 7 DPNCCLGVFGLS--LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGR---RI 81 (83)
T ss_dssp CGGGCEEEESCC--SSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTE---EE
T ss_pred CCCCEEEEeCCC--CCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCE---Ee
Confidence 457899999776 6999999999999999999999753 3211 3699999999999999999999999998 88
Q ss_pred EE
Q 024708 133 HI 134 (264)
Q Consensus 133 rV 134 (264)
+|
T Consensus 82 ~V 83 (83)
T d2cqca1 82 RV 83 (83)
T ss_dssp EE
T ss_pred EC
Confidence 76
No 41
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=3.2e-15 Score=113.58 Aligned_cols=79 Identities=22% Similarity=0.239 Sum_probs=68.5
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEE-c----CCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccce
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF-D----KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 131 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif-~----K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~ 131 (264)
.++++|+|.|++ ..+|+++|.++|+.||.|.++++. + +.+ .+|||+|.+.++|+.|++.|||..|.|+ .
T Consensus 16 ~ps~tl~V~nLp--~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~-g~~fV~f~~~~~A~~Ai~~l~g~~~~g~---~ 89 (102)
T d2cpxa1 16 EPNKVLYLKNLS--PRVTERDLVSLFARFQEKKGPPIQFRMMTGRMR-GQAFITFPNKEIAWQALHLVNGYKLYGK---I 89 (102)
T ss_dssp SCCSEEEEECCC--TTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSC-SEEEEECSSHHHHHHHHHHSTTCBCSSC---B
T ss_pred CCCCEEEEeCCC--CCCCHHHHHHHHhhccceeeEEeeccccccccc-ccceEEeccHHHHHHHHHHhCCCEECCE---E
Confidence 468899999776 589999999999999999988753 2 222 4699999999999999999999999998 9
Q ss_pred EEEEeeeCCC
Q 024708 132 LHISYSRHTD 141 (264)
Q Consensus 132 LrV~fSK~~~ 141 (264)
|+|+|||...
T Consensus 90 l~V~~ak~k~ 99 (102)
T d2cpxa1 90 LVIEFGKNKK 99 (102)
T ss_dssp CEEEECCCCS
T ss_pred EEEEeCCCcc
Confidence 9999998754
No 42
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=1.1e-14 Score=107.37 Aligned_cols=73 Identities=26% Similarity=0.373 Sum_probs=62.2
Q ss_pred EEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC------ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG------LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 62 L~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g------~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
|+|.|++ +.+|+++|+++|+.||.|.+|+|.. +..+ ..|||+|++.++|+.|++.|||..|.|+ +|+|
T Consensus 1 LfV~nLp--~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~---~i~V 75 (85)
T d2cpfa1 1 LFIKNLN--FSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGH---KLEV 75 (85)
T ss_dssp EEEESCC--TTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTE---ECEE
T ss_pred CEEcCCC--CCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCE---EEEE
Confidence 6777655 6999999999999999999999743 2211 2599999999999999999999999998 9999
Q ss_pred EeeeC
Q 024708 135 SYSRH 139 (264)
Q Consensus 135 ~fSK~ 139 (264)
+||+.
T Consensus 76 ~~a~~ 80 (85)
T d2cpfa1 76 RISER 80 (85)
T ss_dssp ECSSC
T ss_pred EECCC
Confidence 99864
No 43
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.53 E-value=2.9e-15 Score=113.44 Aligned_cols=79 Identities=22% Similarity=0.241 Sum_probs=68.5
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
.++++|+|.|++ +.+|+++|+++|+.||.|..++...++++ .|||+|.+.++|+.|++.|||..|.|+ .|+|+|
T Consensus 14 ~~~~~l~V~nL~--~~~te~~l~~~F~~~g~v~~~~~~~~~~~-~afV~f~~~~~A~~A~~~l~~~~~~gr---~i~V~~ 87 (96)
T d1fjca_ 14 RAARTLLAKNLS--FNITEDELKEVFEDALEIRLVSQDGKSKG-IAYIEFKSEADAEKNLEEKQGAEIDGR---SVSLYY 87 (96)
T ss_dssp TGGGEEEEESCC--SSCCHHHHHHHHCSEEEECCEEETTEEEE-EEEEEESSHHHHHHHHHHTTEEEETTE---EEEEEE
T ss_pred CCCCEEEEeCCC--CCCCHHHHHHHHHhcccceeeeecCcccc-EEEEEeCCHHHHHHHHHHcCCCEECCE---EEEEEE
Confidence 456899999776 58999999999999999988875444433 699999999999999999999999998 999999
Q ss_pred eeCCC
Q 024708 137 SRHTD 141 (264)
Q Consensus 137 SK~~~ 141 (264)
++...
T Consensus 88 a~~k~ 92 (96)
T d1fjca_ 88 TGEKG 92 (96)
T ss_dssp CSSSC
T ss_pred eCCCC
Confidence 98754
No 44
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=4.7e-15 Score=109.03 Aligned_cols=74 Identities=27% Similarity=0.282 Sum_probs=64.4
Q ss_pred EEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCC-eeCCCccceEEEEeeeC
Q 024708 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH-CIYDGGFCKLHISYSRH 139 (264)
Q Consensus 61 VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~-~I~g~~~c~LrV~fSK~ 139 (264)
.|+|.|++ +.+|+++|+++|+.||.|.++++..++ + +|||+|.+.++|+.|++.|||. .|.|+ .|+|+||+.
T Consensus 3 ~l~V~nLp--~~~te~~L~~~F~~~G~i~~~~~~~~r-g-~aFV~f~~~~~A~~Ai~~lng~~~~~G~---~i~V~~a~~ 75 (80)
T d2cqha1 3 KLYIGNLS--PAVTADDLRQLFGDRKLPLAGQVLLKS-G-YAFVDYPDQNWAIRAIETLSGKVELHGK---IMEVDYSVS 75 (80)
T ss_dssp CEEEECCC--TTCCHHHHHHHHHHTTCCCSSCEEEET-T-EEEECCSCHHHHHHHHHHHTTTCEETTE---ECEEEECCC
T ss_pred EEEEECCC--CCCCHHHHHHHHHHhCcEEEeEEeccc-c-eEEEEECCHHHHHHHHHHhCCCeEECCE---EEEEEEcCC
Confidence 48888665 699999999999999999888776554 4 6999999999999999999996 68887 999999987
Q ss_pred CC
Q 024708 140 TD 141 (264)
Q Consensus 140 ~~ 141 (264)
+.
T Consensus 76 k~ 77 (80)
T d2cqha1 76 KK 77 (80)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 45
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=8.7e-15 Score=112.66 Aligned_cols=69 Identities=17% Similarity=0.209 Sum_probs=62.0
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCC
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDG 127 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~ 127 (264)
.+++.|+|.|.++.+.+|+++|+++|++||.|.+|++...+ + +|||+|.+.++|..|++.|||..|.++
T Consensus 16 ~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~k-~-~aFV~f~~~e~A~~A~~~lng~~i~~~ 84 (101)
T d2cq2a1 16 YATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNK-P-YSFARYRTTEESKRAYVTLNGKEVVDD 84 (101)
T ss_dssp SCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTTC-S-CEEEEESSHHHHHHHHHHTTTCEEECT
T ss_pred CCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccCc-c-EEEEEECCHHHHHHHHHHhCCCCCCCC
Confidence 56789999987777899999999999999999999987554 4 699999999999999999999999775
No 46
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=3.4e-14 Score=105.76 Aligned_cols=79 Identities=13% Similarity=0.292 Sum_probs=66.6
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcC-CC---CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK-NG---GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K-~~---g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
.++.|+|.|++ +.+|+++|.++|+.||.|.+|++... .. ...|||+|++.++|+.|++.|||..|.|+ .|+
T Consensus 4 ~~~kifV~nLp--~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~---~l~ 78 (90)
T d1x5sa1 4 DEGKLFVGGLS--FDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGR---QIR 78 (90)
T ss_dssp CCSEEEEESCC--TTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSC---CCE
T ss_pred CCCEEEEECCC--CcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCE---EEE
Confidence 45568888665 69999999999999999999986432 21 13699999999999999999999999998 999
Q ss_pred EEeeeCCC
Q 024708 134 ISYSRHTD 141 (264)
Q Consensus 134 V~fSK~~~ 141 (264)
|++++...
T Consensus 79 V~~a~~~~ 86 (90)
T d1x5sa1 79 VDQAGKSS 86 (90)
T ss_dssp EEEEECCC
T ss_pred EEEcCCCC
Confidence 99987654
No 47
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.50 E-value=3.8e-14 Score=105.27 Aligned_cols=77 Identities=14% Similarity=0.255 Sum_probs=64.0
Q ss_pred CCcEEEEEEccCCcccC-HHHHHHHHhccCCeeEEEEEcC-C----CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccce
Q 024708 58 ESNVLLASIENMQYAVT-LDVLHMVFSAFGPVQKIAMFDK-N----GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 131 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT-~d~L~~LFs~yG~V~rIkif~K-~----~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~ 131 (264)
.++.|+|.|++. .+| +|+|+++|+.||.|.+|+|... + ....|||+|.+.++|+.|++ |||..|.|+ .
T Consensus 3 e~~~l~V~nLp~--~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr---~ 76 (86)
T d2ghpa3 3 EGREIMIRNLST--ELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNR---E 76 (86)
T ss_dssp TTTEEEEEEECT--TTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTE---E
T ss_pred CCCEEEEECCCC--CcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCE---E
Confidence 367899998864 665 6789999999999999997432 1 12369999999999999996 999999998 9
Q ss_pred EEEEeeeCC
Q 024708 132 LHISYSRHT 140 (264)
Q Consensus 132 LrV~fSK~~ 140 (264)
|+|+||+..
T Consensus 77 l~V~~a~~k 85 (86)
T d2ghpa3 77 ISVSLADKK 85 (86)
T ss_dssp EEEEECCCC
T ss_pred EEEEEcCCC
Confidence 999999853
No 48
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.50 E-value=5.1e-14 Score=104.05 Aligned_cols=77 Identities=21% Similarity=0.248 Sum_probs=64.3
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
.++.|+|.+++ +.+|+++|+++|+.||.|.+|++.. +..+ ..|||+|.+.++|..|++.|||..+.+. ..+|+
T Consensus 5 ~~t~lfV~nlp--~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~-~~~l~ 81 (85)
T d1b7fa2 5 KDTNLYVTNLP--RTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGG-SQPLS 81 (85)
T ss_dssp TTCEEEEESCC--TTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTC-SSCCE
T ss_pred CCCEEEEeCCC--CCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCC-CeEEE
Confidence 34569998765 6999999999999999999999753 3211 3699999999999999999999999874 34799
Q ss_pred EEee
Q 024708 134 ISYS 137 (264)
Q Consensus 134 V~fS 137 (264)
|+||
T Consensus 82 V~~A 85 (85)
T d1b7fa2 82 VRLA 85 (85)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9986
No 49
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=2.2e-14 Score=106.45 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=65.1
Q ss_pred EEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcC-C---CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK-N---GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 61 VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K-~---~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
-|+|.+++ ..+|+++|.++|+.||.|.+|+|... . ....|||+|.+.++|+.|++.|||..|.|+ .|+|+|
T Consensus 3 rlfV~nlp--~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~---~l~V~~ 77 (85)
T d2u2fa_ 3 KLFIGGLP--NYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDK---KLLVQR 77 (85)
T ss_dssp CEEEETCC--SSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSS---CCEEEE
T ss_pred EEEEECCC--CCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCE---EEEEEE
Confidence 47887664 69999999999999999999998542 2 123699999999999999999999999998 999999
Q ss_pred eeCCC
Q 024708 137 SRHTD 141 (264)
Q Consensus 137 SK~~~ 141 (264)
|+...
T Consensus 78 A~~~~ 82 (85)
T d2u2fa_ 78 ASVGA 82 (85)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 97643
No 50
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.3e-14 Score=108.35 Aligned_cols=76 Identities=22% Similarity=0.180 Sum_probs=65.5
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
..++.|+|.+++ +.+|+++|+++|++||.|.+|++..++++ .|||+|++.++|+.|+. ++..|.|+ +|+|++
T Consensus 3 ~~s~~lfV~nLp--~~~te~~L~~~F~~~G~v~~v~~~~~~~g-fafV~f~~~~~a~~a~~--~~~~i~g~---~l~v~~ 74 (88)
T d1wf0a_ 3 SGSSGVFVGRCT--GDMTEDELREFFSQYGDVMDVFIPKPFRA-FAFVTFADDQIAQSLCG--EDLIIKGI---SVHISN 74 (88)
T ss_dssp SCCCEEEEESCC--SSSCHHHHHHHSTTTSCCCEEECCSSCCS-CCEEECSCHHHHHHTTT--CEEEETTE---EEEEEC
T ss_pred CCCCEEEEeCCC--CCCCHHHHHHHHHHcCCceEEEEeeccCc-eEEEEECCHHHHHHHHh--CCCEECCE---EeEEEe
Confidence 346789999765 68999999999999999999997665555 59999999999999986 88888887 999999
Q ss_pred eeCC
Q 024708 137 SRHT 140 (264)
Q Consensus 137 SK~~ 140 (264)
++..
T Consensus 75 a~~k 78 (88)
T d1wf0a_ 75 AEPK 78 (88)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8653
No 51
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=5.9e-14 Score=107.11 Aligned_cols=75 Identities=16% Similarity=0.067 Sum_probs=65.9
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEee
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fS 137 (264)
....|+|.|++ +.+|+++|.++|+.||+|+++++..+ + .|||+|.+.++|+.|++.|||..|.++ .|+|.|.
T Consensus 14 ~~~~i~V~Nlp--~~~~~~~L~~~F~~~G~v~~~~i~~~--g-~afV~f~~~~~a~~Ai~~lng~~~~g~---~i~v~~~ 85 (98)
T d1wg4a_ 14 SDFRVLVSGLP--PSGSWQDLKDHMREAGDVCYADVQKD--G-MGMVEYLRKEDMEYALRKLDDTKFRSH---EGETSYI 85 (98)
T ss_dssp CSCEEEEECCC--SSCCHHHHHHHHTTSSCEEEEEEETT--T-EEEEEESSHHHHHHHHHHHSSEEEECT---TSCEEEE
T ss_pred CCCEEEEECCC--CCCCHHHHHHHHHhhccccccccccc--c-eEEEEECCHHHHHHHHHHhCCCEeCCe---EEEEEEE
Confidence 34578888664 69999999999999999999998753 4 699999999999999999999999998 8999997
Q ss_pred eCC
Q 024708 138 RHT 140 (264)
Q Consensus 138 K~~ 140 (264)
+..
T Consensus 86 ~~~ 88 (98)
T d1wg4a_ 86 RVY 88 (98)
T ss_dssp EEE
T ss_pred ecC
Confidence 653
No 52
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.6e-14 Score=107.53 Aligned_cols=71 Identities=13% Similarity=0.109 Sum_probs=62.7
Q ss_pred EEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEeeeC
Q 024708 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRH 139 (264)
Q Consensus 61 VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fSK~ 139 (264)
.|+|.|++ +.+|+++|.++|+.||.|.++++..+ + +|||+|++.++|+.|++.|||..|.|+ .|+|.+++.
T Consensus 2 rvfV~nlp--~~~~~~~l~~~F~~~G~v~~~~i~~~--g-~afV~f~~~~~a~~Ai~~l~g~~~~g~---~i~v~~~~~ 72 (87)
T d3begb1 2 RVVVSGLP--PSGSWQDLKDHMREAGDVCYADVYRD--G-TGVVEFVRKEDMTYAVRKLDNTKFRSH---EGETAYIRV 72 (87)
T ss_dssp CEEEEECC--SSCCTTHHHHHHGGGSCEEEEEECTT--S-EEEEEESSHHHHHHHHHHHTTCBCCCT---TSCCCBCEE
T ss_pred eEEEECCC--CcCCHHHHHHHHhhhccccccccccc--c-eeeEEeCCHHHHHHHHHHhCCCEECCc---EeEEeEEec
Confidence 47888776 58999999999999999999998653 3 699999999999999999999999998 788887653
No 53
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=3.4e-14 Score=108.58 Aligned_cols=77 Identities=22% Similarity=0.321 Sum_probs=66.1
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
.+.|+|.+++ +.+|+++|.++|+.||.|.+|+|.. +..+ ..|||+|.+.++|+.|++.|||..|.|+ +|+|
T Consensus 8 ~rtl~V~nLp--~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~---~i~V 82 (104)
T d1p1ta_ 8 LRSVFVGNIP--YEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGR---ALRV 82 (104)
T ss_dssp HSCEEEESCC--TTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSS---CBEE
T ss_pred CCEEEEECCC--CcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCE---EEEE
Confidence 3579999776 5899999999999999999999743 3222 2599999999999999999999999998 9999
Q ss_pred EeeeCC
Q 024708 135 SYSRHT 140 (264)
Q Consensus 135 ~fSK~~ 140 (264)
+||+..
T Consensus 83 ~~a~~~ 88 (104)
T d1p1ta_ 83 DNAASE 88 (104)
T ss_dssp EETTCT
T ss_pred EECCCC
Confidence 998764
No 54
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.48 E-value=4.3e-14 Score=105.89 Aligned_cols=73 Identities=15% Similarity=0.224 Sum_probs=62.1
Q ss_pred CCcEEEEEEccCCcccCHHHH---HHHHhccCCeeEEEEEcCC-----C--CceEEEEeCCHHHHHHHHHHhcCCeeCCC
Q 024708 58 ESNVLLASIENMQYAVTLDVL---HMVFSAFGPVQKIAMFDKN-----G--GLQALIQYPDVQTAVVAKEALEGHCIYDG 127 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L---~~LFs~yG~V~rIkif~K~-----~--g~~AfVqF~d~e~A~~A~~~LnG~~I~g~ 127 (264)
..++|+|.+++ +.+|+++| +++|++||.|.+|++.+.+ + ...|||+|++.++|..|++.|||..|.|+
T Consensus 7 q~n~vyV~nLp--~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr 84 (89)
T d2cpia1 7 QKNLVFVVGLS--QRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGR 84 (89)
T ss_dssp CSSCEEEEEEC--TTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred ecCEEEEECCC--CccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCE
Confidence 34679999876 58999999 7899999999999986432 1 14699999999999999999999999998
Q ss_pred ccceEEEE
Q 024708 128 GFCKLHIS 135 (264)
Q Consensus 128 ~~c~LrV~ 135 (264)
.|+|+
T Consensus 85 ---~lkvS 89 (89)
T d2cpia1 85 ---TLKAS 89 (89)
T ss_dssp ---EEEEE
T ss_pred ---EEEEC
Confidence 88875
No 55
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.48 E-value=8.6e-14 Score=104.41 Aligned_cols=79 Identities=14% Similarity=0.167 Sum_probs=65.5
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CC---CCceEEEEeCCHHHHHHHHHHhc------CCeeCC
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KN---GGLQALIQYPDVQTAVVAKEALE------GHCIYD 126 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~---~g~~AfVqF~d~e~A~~A~~~Ln------G~~I~g 126 (264)
.++++|+|.+++ +.+|+++|+++|+.||.|.++++.. +. ....|||+|.+.++|..|++.|| |..|.|
T Consensus 6 ~~~~tlfV~nLp--~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~g 83 (98)
T d1x4ha1 6 TEGKTVFIRNLS--FDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 83 (98)
T ss_dssp CCCCCEEEESCC--TTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSS
T ss_pred CCCCEEEEcCCC--CcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECC
Confidence 456789999775 6999999999999999999998643 21 11369999999999999999997 566777
Q ss_pred CccceEEEEeeeCC
Q 024708 127 GGFCKLHISYSRHT 140 (264)
Q Consensus 127 ~~~c~LrV~fSK~~ 140 (264)
+ +|+|+||+.+
T Consensus 84 r---~l~v~~a~~k 94 (98)
T d1x4ha1 84 R---QLKVDLAVTR 94 (98)
T ss_dssp C---EEEEECCCCC
T ss_pred E---EEEEEECCCC
Confidence 7 9999999764
No 56
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=4.5e-14 Score=103.65 Aligned_cols=75 Identities=20% Similarity=0.338 Sum_probs=61.6
Q ss_pred EEEEEccCCcccCHHHHHHHHhccCCeeEE-EEEc-CCC---CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKI-AMFD-KNG---GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 62 L~V~~lN~~~~VT~d~L~~LFs~yG~V~rI-kif~-K~~---g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
|+|.|++ +.+|+++|+++|+.||.|.++ ++.. +.. ...|||+|.+.++|+.|++.|||..|.|+ +|+|+|
T Consensus 1 lfV~nLp--~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr---~l~v~~ 75 (83)
T d1x5ta1 1 IFIGNLD--PEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNR---PITVSY 75 (83)
T ss_dssp EEEECCC--TTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTE---ECEEEE
T ss_pred CEEcCCC--CcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCE---EEEEEE
Confidence 5677554 699999999999999999775 4432 211 13699999999999999999999999998 999999
Q ss_pred eeCCC
Q 024708 137 SRHTD 141 (264)
Q Consensus 137 SK~~~ 141 (264)
|+.++
T Consensus 76 a~~k~ 80 (83)
T d1x5ta1 76 AFKKD 80 (83)
T ss_dssp SCCCC
T ss_pred ecCCC
Confidence 87643
No 57
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.7e-13 Score=105.11 Aligned_cols=74 Identities=18% Similarity=0.280 Sum_probs=63.9
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcC-----CCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK-----NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K-----~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
.++|+|.+++ +.+|+++|.++|+.||.|.+|+|... .+| .|||+|.+.++|+.|++ |||..|.|+ .|+
T Consensus 18 ~~tifV~nL~--~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG-~afV~F~~~e~a~~A~~-l~g~~~~G~---~l~ 90 (101)
T d2cq4a1 18 ARTVFCMQLA--ARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG-IAYVEFCEIQSVPLAIG-LTGQRLLGV---PII 90 (101)
T ss_dssp HTEEEEESCC--TTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCC-CEEEEESCGGGHHHHHH-HTTEEETTE---EEE
T ss_pred CCEEEEECCC--CCCCHHHHHHHHcCCCeEEEEEeeecCCCccccc-eEEEEECCHHHHHHHHH-HCCCEECCE---EEE
Confidence 4689998665 69999999999999999999997542 233 59999999999999995 999999998 999
Q ss_pred EEeeeC
Q 024708 134 ISYSRH 139 (264)
Q Consensus 134 V~fSK~ 139 (264)
|.+|+.
T Consensus 91 V~~a~~ 96 (101)
T d2cq4a1 91 VQASQA 96 (101)
T ss_dssp EEEHHH
T ss_pred EEECCC
Confidence 999864
No 58
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.7e-13 Score=103.42 Aligned_cols=79 Identities=28% Similarity=0.312 Sum_probs=64.7
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEE--------EEEc-CC---CCceEEEEeCCHHHHHHHHHHhcCCee
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI--------AMFD-KN---GGLQALIQYPDVQTAVVAKEALEGHCI 124 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rI--------kif~-K~---~g~~AfVqF~d~e~A~~A~~~LnG~~I 124 (264)
..++.|+|.|++ +.+|+++|.++|+.||.|.++ ++.. +. ....|||+|.+.++|+.|++.|||..|
T Consensus 6 ~~~~~i~V~nLp--~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 83 (101)
T d2cpea1 6 SDNSAIYVQGLN--DSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 83 (101)
T ss_dssp CCCCEEEEECCC--TTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCC--CcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEE
Confidence 456789999775 699999999999999998643 2221 11 113699999999999999999999999
Q ss_pred CCCccceEEEEeeeCC
Q 024708 125 YDGGFCKLHISYSRHT 140 (264)
Q Consensus 125 ~g~~~c~LrV~fSK~~ 140 (264)
.|+ .|+|++||..
T Consensus 84 ~gr---~i~V~~a~~~ 96 (101)
T d2cpea1 84 QGS---KLKVSLARKK 96 (101)
T ss_dssp TTE---ECEEECSSCC
T ss_pred CCE---EEEEEEcCCC
Confidence 998 9999999864
No 59
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.7e-13 Score=104.50 Aligned_cols=76 Identities=12% Similarity=0.118 Sum_probs=63.2
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
..+.|+|.|++ +.+|+++|+++|+.||.|.++++.....+ ..|||+|.+.++|+.|++.|||..|.|+ .|+|
T Consensus 17 ~~~~lfV~nLp--~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr---~~~v 91 (101)
T d1x5oa1 17 DPTNLYISNLP--LSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTP---PGVS 91 (101)
T ss_dssp CTTEEEEESCC--TTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCC---TTSC
T ss_pred CCCEEEEeCCC--CCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCc---CCcc
Confidence 44678888665 68999999999999999999986543221 3699999999999999999999999998 6777
Q ss_pred Eeee
Q 024708 135 SYSR 138 (264)
Q Consensus 135 ~fSK 138 (264)
.+++
T Consensus 92 ~~~~ 95 (101)
T d1x5oa1 92 APTE 95 (101)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 6654
No 60
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=3.5e-13 Score=102.65 Aligned_cols=78 Identities=9% Similarity=0.186 Sum_probs=62.6
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCC--C---CceEEEEeCCHHHHHHHHHHhcCCeeCCCccce
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN--G---GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCK 131 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~--~---g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~ 131 (264)
.+..+|+|.|++ +.+|+++|+++|+.|| |.+|+++.+. . ...|||+|++.++|++|+ .|||..|.++ .
T Consensus 13 ~p~~~v~V~nLp--~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr---~ 85 (104)
T d1wi8a_ 13 SPPYTAFLGNLP--YDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNK---R 85 (104)
T ss_dssp SSCEEEEEESCC--SSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTE---E
T ss_pred CCCCEEEEeCCC--CcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCE---E
Confidence 356788888665 6999999999999999 7777753221 1 126999999999998776 5999999998 9
Q ss_pred EEEEeeeCCC
Q 024708 132 LHISYSRHTD 141 (264)
Q Consensus 132 LrV~fSK~~~ 141 (264)
|+|+||+...
T Consensus 86 l~V~~a~~~~ 95 (104)
T d1wi8a_ 86 IRVDVADQAQ 95 (104)
T ss_dssp CEEEECCCCC
T ss_pred EEEEECCCCC
Confidence 9999987653
No 61
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=3.3e-13 Score=103.38 Aligned_cols=75 Identities=16% Similarity=0.193 Sum_probs=63.3
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-C----CCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-K----NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K----~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
.+.|+|.|++ +.+|+++|+++|+.||.|.+|+|.. + .++ .|||+|++.++|+.|++.+|+ .|.|+ +|+
T Consensus 10 ~~~lfV~nLp--~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg-~afV~f~~~~~A~~Ai~~~~~-~l~Gr---~l~ 82 (103)
T d2cqda1 10 FTKIFVGGLP--YHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRG-YGFVTMADRAAAERACKDPNP-IIDGR---KAN 82 (103)
T ss_dssp SSEEEEECCC--SSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCS-EEEEEESSHHHHHHHHTCSSC-EETTE---ECE
T ss_pred CcEEEEeCCC--CcCcHHHHHHHHhhcccccceeccccccccccCC-eEEEEECCHHHHHHHHHHCCC-cCCCE---EEE
Confidence 3569988665 6999999999999999999999753 2 233 699999999999999999987 68888 899
Q ss_pred EEeeeCC
Q 024708 134 ISYSRHT 140 (264)
Q Consensus 134 V~fSK~~ 140 (264)
|++++..
T Consensus 83 V~~a~~~ 89 (103)
T d2cqda1 83 VNLAYLG 89 (103)
T ss_dssp EEESTTT
T ss_pred EEEcCCC
Confidence 9988654
No 62
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.40 E-value=5.6e-14 Score=105.77 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=64.1
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc----CCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD----KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~----K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
....|+|.|++ +.+|+++|+++|+.||.|.++++.+ +.++ .|||+|.+.++|+.|++ |||..|.|+ .|+
T Consensus 12 ~~~~ifV~nL~--~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg-~afv~F~~~e~a~~Al~-~~g~~~~g~---~i~ 84 (91)
T d1fjeb1 12 TPFNLFIGNLN--PNKSVAELKVAISELFAKNDLAVVDVRTGTNRK-FGYVDFESAEDLEKALE-LTGLKVFGN---EIK 84 (91)
T ss_dssp SSEEEEEECCC--TTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTT-EEEEEESSHHHHHHHHH-GGGEEETTE---EEE
T ss_pred CCcEEEEeCcc--CcchHHHHHHHHhcCCcEEEeeeeecCCCCccE-EeEEeeCCHHHHHHHHh-cCCcEECCE---EEE
Confidence 34578888665 6999999999999999998887633 2334 69999999999999996 999999998 999
Q ss_pred EEeeeC
Q 024708 134 ISYSRH 139 (264)
Q Consensus 134 V~fSK~ 139 (264)
|++||.
T Consensus 85 V~~ak~ 90 (91)
T d1fjeb1 85 LEKPKG 90 (91)
T ss_dssp EECCCC
T ss_pred EEecCC
Confidence 999985
No 63
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=7e-13 Score=102.09 Aligned_cols=76 Identities=11% Similarity=0.170 Sum_probs=64.2
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcC-----CCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK-----NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K-----~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
.+.|+|.+++ +.+|+++|+++|+.||.|.+++|... .++ +|||+|.+.++|+.|++ ++|..|.|+ .|+
T Consensus 20 ~~~lfVgnLp--~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg-~aFV~f~~~~~a~~al~-~~~~~l~G~---~i~ 92 (103)
T d1x4ba1 20 FRKLFIGGLS--FETTEESLRNYYEQWGKLTDCVVMRDPASKRSRG-FGFVTFSSMAEVDAAMA-ARPHSIDGR---VVE 92 (103)
T ss_dssp HTEEEEECCT--TCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCS-EEEEECSSHHHHHHHHT-SCSEEETTE---EEE
T ss_pred CCEEEEeCCC--CcCCHHHHHHHHHhhCcccceeecccccCCCccC-eEEEEECCHHHHHHHHH-hCCCeECCE---EEE
Confidence 3579998665 79999999999999999999997532 233 69999999999999996 799999887 999
Q ss_pred EEeeeCCC
Q 024708 134 ISYSRHTD 141 (264)
Q Consensus 134 V~fSK~~~ 141 (264)
|.+++.+.
T Consensus 93 V~~a~~ke 100 (103)
T d1x4ba1 93 PKRAVARE 100 (103)
T ss_dssp EECCSSCC
T ss_pred EEECcccC
Confidence 99987654
No 64
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37 E-value=5.1e-13 Score=98.44 Aligned_cols=76 Identities=14% Similarity=0.250 Sum_probs=61.6
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeE-EEEEcC-CC--CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQK-IAMFDK-NG--GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~r-Ikif~K-~~--g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~L 132 (264)
+...+|+|.|++ +.+|+++|.++|+.||.|.+ |++..+ ++ ...|||+|++.++|++|++.|||..|.++ .|
T Consensus 7 p~~~~l~v~nLp--~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr---~i 81 (86)
T d2cqpa1 7 PGPTIIKVQNMP--FTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSR---KV 81 (86)
T ss_dssp CSSEEEEEESCC--TTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTE---EC
T ss_pred CCCCEEEEECCC--CCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCE---EE
Confidence 345678888655 79999999999999999976 344332 21 13699999999999999999999999998 88
Q ss_pred EEEee
Q 024708 133 HISYS 137 (264)
Q Consensus 133 rV~fS 137 (264)
+|+++
T Consensus 82 ~v~l~ 86 (86)
T d2cqpa1 82 KLVLG 86 (86)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 98764
No 65
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.37 E-value=1.2e-12 Score=94.93 Aligned_cols=70 Identities=13% Similarity=0.107 Sum_probs=59.1
Q ss_pred EEEEEEccCCcccCHHHHHHHHhccCCeeEEEEE-cCCC-CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF-DKNG-GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 61 VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif-~K~~-g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
.|+|.|++ +.+|+++|+++|+.||.|.+|++. ++++ ...|||+|++.++|++|+. |||..|.|+ .|+|+.
T Consensus 2 tv~V~nlp--~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~---~i~V~~ 73 (75)
T d2ghpa2 2 TVLVKNLP--KSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQN---EIIVSH 73 (75)
T ss_dssp EEEEEEEC--TTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTE---ECEEEE
T ss_pred EEEEECCC--CCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCE---EEEEEE
Confidence 57888775 699999999999999999999974 3321 2379999999999999985 899999888 888864
No 66
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.36 E-value=5.8e-13 Score=95.31 Aligned_cols=70 Identities=14% Similarity=0.181 Sum_probs=58.6
Q ss_pred EEEEEccCCcccCHHHHHHHHhccCCeeEEEEE-cCC---CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEee
Q 024708 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF-DKN---GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137 (264)
Q Consensus 62 L~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif-~K~---~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fS 137 (264)
|+|.++ ++.+|+++|.++|+.||.|.++.+. .+. ....|||+|.+.++|+.|++ |||..|.|+ .|+|++|
T Consensus 2 lfV~nL--p~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr---~i~V~~A 75 (75)
T d2msta_ 2 IFVGGL--SVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNK---MVECKKA 75 (75)
T ss_dssp EEEECC--CSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTB---CCEEEEC
T ss_pred EEEeCC--CCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCe---EEEEEEC
Confidence 667755 4699999999999999999999863 222 12469999999999999997 999999998 8999865
No 67
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=1.7e-12 Score=95.92 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=61.3
Q ss_pred cEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCC---CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNG---GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 60 ~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~---g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
+.|+|.+++ +.+|+++|+++|+.||.|.+|+|.. +.. ..+|||+|.+.++|+.|++ ++|..|.|+ .|+|.
T Consensus 7 ~~lfV~nlp--~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr---~i~V~ 80 (84)
T d1l3ka1 7 RKLFIGGLS--FETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGR---VVEPK 80 (84)
T ss_dssp GEEEEESCC--TTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTE---ECEEE
T ss_pred cEEEEECCC--CCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCE---EEEEE
Confidence 578988665 6999999999999999999999743 321 1379999999999999997 699999998 88887
Q ss_pred eee
Q 024708 136 YSR 138 (264)
Q Consensus 136 fSK 138 (264)
.|.
T Consensus 81 ~A~ 83 (84)
T d1l3ka1 81 RAV 83 (84)
T ss_dssp ECC
T ss_pred eee
Confidence 654
No 68
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=7e-13 Score=99.89 Aligned_cols=78 Identities=10% Similarity=0.117 Sum_probs=62.3
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCC-eeEEEEEcCC-----CCceEEEEeCCHHHHHHHHHHhcCCee--CCCccc
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGP-VQKIAMFDKN-----GGLQALIQYPDVQTAVVAKEALEGHCI--YDGGFC 130 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~-V~rIkif~K~-----~g~~AfVqF~d~e~A~~A~~~LnG~~I--~g~~~c 130 (264)
|+-|+|.+++ ..+|+++|+++|+.||. |.+|++.... ....|||+|.+.++|..|++.|++..+ .++
T Consensus 1 n~rLyV~nLp--~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~--- 75 (96)
T d2disa1 1 NCRLFIGGIP--KMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGH--- 75 (96)
T ss_dssp SEEEEEECCC--TTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTB---
T ss_pred CCEEEEcCCC--CcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCE---
Confidence 3468888665 69999999999999995 8999875321 113699999999999999999976554 455
Q ss_pred eEEEEeeeCCC
Q 024708 131 KLHISYSRHTD 141 (264)
Q Consensus 131 ~LrV~fSK~~~ 141 (264)
.|+|+||++..
T Consensus 76 ~i~V~~A~p~~ 86 (96)
T d2disa1 76 QIAVDWAEPEI 86 (96)
T ss_dssp CCEEEESCSSC
T ss_pred EEEEEEcCCCC
Confidence 89999998643
No 69
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=2.1e-12 Score=93.54 Aligned_cols=72 Identities=11% Similarity=0.158 Sum_probs=59.9
Q ss_pred cEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 60 ~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
+-|+|.|++ +.+|+++|.++|+.||.|.++++.. +..+ ..|||+|.+.++|++|++ |||..|.|+ .|+|+
T Consensus 3 r~lfV~nLp--~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr---~i~V~ 76 (79)
T d1l3ka2 3 KKIFVGGIK--EDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGH---NCEVR 76 (79)
T ss_dssp SEEEEECCT--TTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTE---ECEEE
T ss_pred CEEEECCCC--CcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCE---EEEEE
Confidence 568888665 6999999999999999999999643 3221 369999999999888885 899999998 88887
Q ss_pred ee
Q 024708 136 YS 137 (264)
Q Consensus 136 fS 137 (264)
.|
T Consensus 77 ~A 78 (79)
T d1l3ka2 77 KA 78 (79)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 70
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=2.7e-13 Score=96.83 Aligned_cols=64 Identities=14% Similarity=0.059 Sum_probs=54.5
Q ss_pred EEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCC----CCceEEEEeCCHHHHHHHHHHhcCCeeCCC
Q 024708 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN----GGLQALIQYPDVQTAVVAKEALEGHCIYDG 127 (264)
Q Consensus 62 L~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~----~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~ 127 (264)
|+|.++ +..+|+++|.++|+.||.|.++++...+ ....|||+|.+.++|++|++.|||..|.|+
T Consensus 1 lyV~nL--p~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr 68 (72)
T d1x4ea1 1 LYIRGL--QPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQ 68 (72)
T ss_dssp EEEESC--CTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEE
T ss_pred CEEeCC--CCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCE
Confidence 567755 4699999999999999999999875432 123699999999999999999999998886
No 71
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=1.7e-12 Score=96.15 Aligned_cols=74 Identities=16% Similarity=0.108 Sum_probs=63.1
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
++.|+|.+++ +.+|+++|.++|+.||.|.+|++.+.+.+ ..|||+|.+.++|+.|++ ++|..+.|+ .|+|.
T Consensus 6 ~rtvfV~nlp--~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~---~l~v~ 79 (85)
T d1zh5a2 6 NRSVYIKGFP--TDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKET---DLLIL 79 (85)
T ss_dssp TTEEEEECCC--TTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTE---ECEEE
T ss_pred cCEEEEECCC--CCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCE---EEEEE
Confidence 4689998765 69999999999999999999998543321 369999999999999996 799999998 99998
Q ss_pred eee
Q 024708 136 YSR 138 (264)
Q Consensus 136 fSK 138 (264)
|++
T Consensus 80 ~~~ 82 (85)
T d1zh5a2 80 FKD 82 (85)
T ss_dssp EGG
T ss_pred EcC
Confidence 864
No 72
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.34 E-value=5.3e-13 Score=97.51 Aligned_cols=71 Identities=11% Similarity=0.107 Sum_probs=59.3
Q ss_pred EEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CC---CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KN---GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 61 VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~---~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
.|+|.|++ +.+|+++|+++|++||.|.+|+|.. +. ....|||+|++.++|+.|++ +|++.|.|+ .|+|..
T Consensus 2 klfV~nLp--~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr---~i~V~~ 75 (77)
T d1uawa_ 2 KMFIGGLS--WQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSK---TIDPKV 75 (77)
T ss_dssp CEEEESCC--SSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSC---CCEEEE
T ss_pred EEEEeCCC--CcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCe---EEEEEE
Confidence 47887665 6999999999999999999999743 22 11369999999999999997 799999998 888876
Q ss_pred e
Q 024708 137 S 137 (264)
Q Consensus 137 S 137 (264)
|
T Consensus 76 A 76 (77)
T d1uawa_ 76 A 76 (77)
T ss_dssp C
T ss_pred C
Confidence 5
No 73
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=4.2e-12 Score=95.32 Aligned_cols=76 Identities=17% Similarity=0.178 Sum_probs=61.8
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-CCCC---ceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-KNGG---LQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K~~g---~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
.+..|+|.+++ +.+|+++|+++|+.||.|.+|+|.. +..+ ..|||+|.+.++|+.|++. +..|.|+ .|+
T Consensus 7 ~~~~lfV~nLp--~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr---~i~ 79 (90)
T d2cqga1 7 KTSDLIVLGLP--WKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGR---WCD 79 (90)
T ss_dssp CCCCEEEESCC--SSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTE---EEE
T ss_pred CCCeEEEECCC--CCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCE---EeE
Confidence 45678998665 6999999999999999999999643 3211 3699999999999999985 4467777 899
Q ss_pred EEeeeCC
Q 024708 134 ISYSRHT 140 (264)
Q Consensus 134 V~fSK~~ 140 (264)
|.+++..
T Consensus 80 v~~a~~k 86 (90)
T d2cqga1 80 CKLPNSK 86 (90)
T ss_dssp EECCCTT
T ss_pred EEeCCCC
Confidence 9988764
No 74
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=1.6e-12 Score=94.14 Aligned_cols=67 Identities=13% Similarity=0.174 Sum_probs=56.2
Q ss_pred EEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc-C----CCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD-K----NGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 62 L~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~-K----~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
|+|.|++ +.+|+++|+++|++||.|.+|++.. + .++ .|||+|.+.++|+.|++ +++..|.|+ .|+|.
T Consensus 2 lfV~nl~--~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg-~afV~f~~~~~a~~Al~-~~~~~l~Gr---~i~V~ 73 (75)
T d1hd0a_ 2 MFIGGLS--WDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRG-FGFVLFKESESVDKVMD-QKEHKLNGK---VIDPK 73 (75)
T ss_dssp EEEECCC--TTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCS-EEEEEESSHHHHHHHHH-TCCCCBTTB---CCEEC
T ss_pred EEEeCCC--CcCCHHHHHHHHHhhccccccccccCCCCCCcCc-eEEEEECCHHHHHHHHh-cCCCEECCC---EEEee
Confidence 5676554 6999999999999999999999743 2 233 69999999999999997 799999887 77774
No 75
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=1.9e-12 Score=98.76 Aligned_cols=78 Identities=12% Similarity=0.121 Sum_probs=63.2
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEE-cCCC--CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF-DKNG--GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif-~K~~--g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
..+.+|+|.+|+ +.+|+++|+++|+.|| |.+|.+. +.++ ...|||+|.+.++|+.|++ |||..|.++ .|+
T Consensus 13 ~~~~~v~v~nLp--~~~te~dl~~~F~~~~-~~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR---~I~ 85 (102)
T d1weza_ 13 TTGHCVHMRGLP--YRATENDIYNFFSPLN-PMRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHR---YVE 85 (102)
T ss_dssp SSSCEEEEESCC--TTCCHHHHHHSSCSCC-CSEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSS---CCE
T ss_pred CCCCEEEEeCCC--CcCCHHHHHHHHhccC-cceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCE---EEE
Confidence 445688888665 7999999999999998 5566653 3321 1369999999999999986 899999999 999
Q ss_pred EEeeeCCC
Q 024708 134 ISYSRHTD 141 (264)
Q Consensus 134 V~fSK~~~ 141 (264)
|.+++...
T Consensus 86 V~~s~~~~ 93 (102)
T d1weza_ 86 LFLNSTAG 93 (102)
T ss_dssp EEEECCCC
T ss_pred EEEcCCCC
Confidence 99987654
No 76
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=1.1e-12 Score=101.17 Aligned_cols=65 Identities=15% Similarity=0.180 Sum_probs=57.8
Q ss_pred CcccCHHHHHHHHhccCCeeEEEEEcCCC---CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEee
Q 024708 70 QYAVTLDVLHMVFSAFGPVQKIAMFDKNG---GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137 (264)
Q Consensus 70 ~~~VT~d~L~~LFs~yG~V~rIkif~K~~---g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fS 137 (264)
...+++|+|.++|++||.|.+|+|.+... .++|||+|.+.++|.+|++.|||..+.|+ +|+|+|+
T Consensus 36 ~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr---~i~v~~s 103 (104)
T d1jmta_ 36 YDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQ---PIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTE---ECCEEEC
T ss_pred hhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCE---EEEEEEC
Confidence 35799999999999999999999865332 14799999999999999999999999998 9999986
No 77
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=2e-12 Score=99.30 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=64.5
Q ss_pred CCCcEEEEEEccCC--------cccCHHHHHHHHhccCCeeEEEEEcCC------CCceEEEEeCCHHHHHHHHHHhcCC
Q 024708 57 PESNVLLASIENMQ--------YAVTLDVLHMVFSAFGPVQKIAMFDKN------GGLQALIQYPDVQTAVVAKEALEGH 122 (264)
Q Consensus 57 ~~s~VL~V~~lN~~--------~~VT~d~L~~LFs~yG~V~rIkif~K~------~g~~AfVqF~d~e~A~~A~~~LnG~ 122 (264)
+||+||.|.|+=.. +....++|++.|++||.|++|+|.+.. ....|||+|.+.++|..|++.|||.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 67999999865111 223346789999999999999986422 1147999999999999999999999
Q ss_pred eeCCCccceEEEEeeeC
Q 024708 123 CIYDGGFCKLHISYSRH 139 (264)
Q Consensus 123 ~I~g~~~c~LrV~fSK~ 139 (264)
.+.|+ .|+|+|+..
T Consensus 82 ~f~gR---~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANR---VVVTKYCDP 95 (104)
T ss_dssp CSSSS---CCEEEEECH
T ss_pred EECCe---EEEEEEcCH
Confidence 99999 999999864
No 78
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=5.6e-12 Score=96.25 Aligned_cols=81 Identities=12% Similarity=0.042 Sum_probs=65.0
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEE-EcCCC---CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAM-FDKNG---GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIki-f~K~~---g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~L 132 (264)
..+.+|+|.+| ++.+|+++|+++|+.||.|..+++ ..++. ...|||+|++.++|++|++ ||+..|.++ .|
T Consensus 13 ~~~~~v~v~nL--P~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR---~i 86 (104)
T d1wg5a_ 13 ANDGFVRLRGL--PFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHR---YI 86 (104)
T ss_dssp SCCCEEEEESC--CTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSS---CC
T ss_pred CCCcEEEEeCC--CCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcce---EE
Confidence 34567888855 479999999999999999987553 32221 1369999999999999996 999999998 89
Q ss_pred EEEeeeCCCCc
Q 024708 133 HISYSRHTDLS 143 (264)
Q Consensus 133 rV~fSK~~~l~ 143 (264)
+|.+++..+.+
T Consensus 87 ~V~~~~~~~~~ 97 (104)
T d1wg5a_ 87 EIFKSSRAEVR 97 (104)
T ss_dssp EEEEECTTTSC
T ss_pred EEEECCHHHhc
Confidence 99999877643
No 79
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=9.1e-12 Score=94.98 Aligned_cols=81 Identities=16% Similarity=0.200 Sum_probs=65.1
Q ss_pred CCCCcEEEEEEccCCccc---------CHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCC
Q 024708 56 EPESNVLLASIENMQYAV---------TLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYD 126 (264)
Q Consensus 56 ~~~s~VL~V~~lN~~~~V---------T~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g 126 (264)
...++||+|.|+=....+ ..++|++.|++||.|.+|++.+++..+.|||+|++.++|..|++.|||..+.|
T Consensus 5 ~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~g 84 (99)
T d2dita1 5 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGG 84 (99)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETT
T ss_pred CCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEECC
Confidence 356789999865111111 23679999999999999998765533479999999999999999999999999
Q ss_pred CccceEEEEeeeC
Q 024708 127 GGFCKLHISYSRH 139 (264)
Q Consensus 127 ~~~c~LrV~fSK~ 139 (264)
+ +|+|+|...
T Consensus 85 r---~i~v~~~~g 94 (99)
T d2dita1 85 R---QITAQAWDG 94 (99)
T ss_dssp E---ECEEEECCS
T ss_pred E---EEEEEEeCC
Confidence 9 999999754
No 80
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=2.1e-12 Score=93.96 Aligned_cols=69 Identities=17% Similarity=0.229 Sum_probs=56.0
Q ss_pred EEEEEccCCcccCHHHHHHHHhccCCeeEEEEE-cCC----CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEe
Q 024708 62 LLASIENMQYAVTLDVLHMVFSAFGPVQKIAMF-DKN----GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISY 136 (264)
Q Consensus 62 L~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif-~K~----~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~f 136 (264)
|+|.+++ +.+|+++|.++|++||.|.+|+|. ++. +| .|||+|++.++|++|++. +++.|.|+ .|+|..
T Consensus 2 lfVgnLp--~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG-~~FV~f~~~~~a~~al~~-~~~~i~g~---~i~vk~ 74 (75)
T d1x0fa1 2 IFVGGLS--PDTPEEKIREYFGGFGEVESIELPMDNKTNKRRG-FCFITFKEEEPVKKIMEK-KYHNVGLS---KCEIKV 74 (75)
T ss_dssp EEEESCC--SSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTC-CEEEEESSSHHHHHHTTC-SSCCBTTB---CCEEEC
T ss_pred EEEcCCC--CCCCHHHHHHHHHHhCCccccccccccccccccc-EEEEEECCHHHHHHHHhh-CCCEECCE---EeEEEE
Confidence 6777554 699999999999999999999974 332 34 599999999999999974 77888887 666654
Q ss_pred e
Q 024708 137 S 137 (264)
Q Consensus 137 S 137 (264)
|
T Consensus 75 A 75 (75)
T d1x0fa1 75 A 75 (75)
T ss_dssp C
T ss_pred C
Confidence 3
No 81
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=1.7e-11 Score=95.35 Aligned_cols=77 Identities=12% Similarity=0.126 Sum_probs=59.9
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCH-HHHHHHHHHhcCCeeCCCccceEEEE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDV-QTAVVAKEALEGHCIYDGGFCKLHIS 135 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~-e~A~~A~~~LnG~~I~g~~~c~LrV~ 135 (264)
+...+| +.+.|+++.+|+++|+++|+.||.|..|.|.+.+ + +|||.|.+. ++|..|+..|||..|.++ ...+.+.
T Consensus 8 ~~g~~~-~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~k-g-~gfV~F~~~~~~A~~a~~~~~~~~l~~~-~~~v~~~ 83 (113)
T d1owxa_ 8 KIGCLL-KFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGA-K-EGIILFKEKAKEALGKAKDANNGNLQLR-NKEVTWE 83 (113)
T ss_dssp CCCCEE-EEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTC-S-EEEEEESSCHHHHHHHHHHTTTSCBCTT-SSSEEEE
T ss_pred CCCCeE-EEECCCCCCCCHHHHHHHHHhcCChheEEEecCC-c-eEEEEecCcHHHHHHHHHHhcCCceecC-ceEEEEe
Confidence 444444 3344555799999999999999999999987554 4 799999995 789999999999999988 3444444
Q ss_pred ee
Q 024708 136 YS 137 (264)
Q Consensus 136 fS 137 (264)
+.
T Consensus 84 ~~ 85 (113)
T d1owxa_ 84 VL 85 (113)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 82
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=2.2e-11 Score=92.46 Aligned_cols=75 Identities=12% Similarity=0.092 Sum_probs=60.8
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEE-EEEcC-C---CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEE
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKI-AMFDK-N---GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLH 133 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rI-kif~K-~---~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~Lr 133 (264)
..+|+|.|+ ++.+|+++|.++|+.||.|..+ .+..+ . +| .|||+|.+.++|+.|++ |||..|.|+ .|+
T Consensus 8 ~~~v~v~nL--p~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G-~afV~F~s~~~a~~Al~-~n~~~i~gr---~i~ 80 (103)
T d2cpya1 8 KVCAHITNI--PFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLG-QALVQFKNEDDARKSER-LHRKKLNGR---EAF 80 (103)
T ss_dssp CCEEEEESC--CTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSS-CEEEECSSHHHHHHHGG-GCSEEETTE---EEE
T ss_pred ceEEEEeCC--CCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCc-cEEEEECCHHHHHHHHh-cCCCeECCc---EEE
Confidence 456777755 5799999999999999999764 44332 1 23 69999999999999996 999999998 999
Q ss_pred EEeeeCC
Q 024708 134 ISYSRHT 140 (264)
Q Consensus 134 V~fSK~~ 140 (264)
|.++...
T Consensus 81 V~~~~~~ 87 (103)
T d2cpya1 81 VHVVTLE 87 (103)
T ss_dssp EEEECHH
T ss_pred EEECCHH
Confidence 9887544
No 83
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=2.5e-10 Score=92.89 Aligned_cols=77 Identities=10% Similarity=0.107 Sum_probs=64.6
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCC----CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNG----GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~----g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~L 132 (264)
...+.|+|.+++ +.+|+++|.++|+.||.|..|.+..... ...|||+|.+.++|++|++ +++..|.|+ .|
T Consensus 95 ~~~~~i~V~~lp--~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~---~i 168 (183)
T d1u1qa_ 95 LTVKKIFVGGIK--EDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGH---NC 168 (183)
T ss_dssp CCCSEEEEECCC--TTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTE---EE
T ss_pred cccceeEEccCC--CcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCE---EE
Confidence 455789998765 6999999999999999999998764321 1369999999999999997 799999887 99
Q ss_pred EEEeeeC
Q 024708 133 HISYSRH 139 (264)
Q Consensus 133 rV~fSK~ 139 (264)
+|.+|..
T Consensus 169 ~V~~A~~ 175 (183)
T d1u1qa_ 169 EVRKALS 175 (183)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9998864
No 84
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.04 E-value=1.7e-10 Score=85.24 Aligned_cols=69 Identities=16% Similarity=0.104 Sum_probs=53.9
Q ss_pred EEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEee
Q 024708 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYS 137 (264)
Q Consensus 61 VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fS 137 (264)
-++|+.++ +..|++.|. .|+.||.|.++++.+.+ + .|||+|++.++|++|++ |||..|.|+ +.|.|.-.
T Consensus 6 wV~V~G~p--~~~~~~il~-~F~~~G~I~~~~~~~~~-~-~~fV~f~~~~~A~~Al~-~nG~~~~g~--~~vgV~~~ 74 (81)
T d1wwha1 6 WVTVFGFP--QASASYILL-QFAQYGNILKHVMSNTG-N-WMHIRYQSKLQARKALS-KDGRIFGES--IMIGVKPC 74 (81)
T ss_dssp EEEEECCC--GGGHHHHHH-HHHTTSCEEEEEECSSS-S-EEEEEESSHHHHHHHHT-TTTCEETTT--EECEEEEC
T ss_pred EEEEECCC--hHHHHHHHH-HHHhhhhhheEEecCCC-C-EEEEEEcccHHHHHHHh-cCCCeECCc--EEEEEEeC
Confidence 46666654 577776665 79999999999986544 4 69999999999999996 999998876 44556543
No 85
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=3.6e-12 Score=94.66 Aligned_cols=69 Identities=14% Similarity=0.207 Sum_probs=55.5
Q ss_pred cEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEc----------CCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCcc
Q 024708 60 NVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFD----------KNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF 129 (264)
Q Consensus 60 ~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~----------K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~ 129 (264)
+.|+|.|+ ++.+|+++|.++|+.||.|.++.+.. ++++ .|||+|++.++|+.|++ |||..+.|+
T Consensus 2 RrlyVgNL--p~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg-~afV~f~~~e~a~~a~~-l~g~~~~Gr-- 75 (90)
T d1u2fa_ 2 RRLYVGNI--PFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKN-FAFLEFRSVDETTQAMA-FDGIIFQGQ-- 75 (90)
T ss_dssp CEEEECSC--CTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTT-EEEEEESSCTTTTTGGG-GSSCCSSSS--
T ss_pred CEEEEcCC--CCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCce-EEEEEeCCHHHHHHHHh-hCCcEECCE--
Confidence 45777755 47999999999999999987665421 2334 59999999999999985 999999998
Q ss_pred ceEEEE
Q 024708 130 CKLHIS 135 (264)
Q Consensus 130 c~LrV~ 135 (264)
.|+|+
T Consensus 76 -~l~V~ 80 (90)
T d1u2fa_ 76 -SLKIR 80 (90)
T ss_dssp -CCCCB
T ss_pred -EEEEC
Confidence 66663
No 86
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.01 E-value=1.6e-10 Score=89.22 Aligned_cols=77 Identities=6% Similarity=0.051 Sum_probs=61.0
Q ss_pred CCCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEE-E-EcCCC--CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceE
Q 024708 57 PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIA-M-FDKNG--GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKL 132 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIk-i-f~K~~--g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~L 132 (264)
....+|+|.|++ +.+|+++|.++|+.||.|..+. + .++++ .+.|||+|.+.++|+.|++ |||..|.++ .|
T Consensus 16 ~~~~~i~v~nLp--~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR---~i 89 (112)
T d1wela1 16 EAGFCVYLKGLP--FEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNR---FI 89 (112)
T ss_dssp CCCCEEEEECCC--TTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTS---CB
T ss_pred CCCeEEEEecCC--CcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCE---EE
Confidence 345688888654 7999999999999999987543 3 33322 1369999999999999996 999999999 88
Q ss_pred EEEeeeC
Q 024708 133 HISYSRH 139 (264)
Q Consensus 133 rV~fSK~ 139 (264)
+|..+..
T Consensus 90 ~V~~~~~ 96 (112)
T d1wela1 90 QVHPITK 96 (112)
T ss_dssp EEEEECH
T ss_pred EEEEcCh
Confidence 8877643
No 87
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.61 E-value=7.8e-08 Score=77.72 Aligned_cols=73 Identities=15% Similarity=0.182 Sum_probs=55.9
Q ss_pred CcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcC-C---CCceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEE
Q 024708 59 SNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDK-N---GGLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHI 134 (264)
Q Consensus 59 s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K-~---~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV 134 (264)
.+.|+|+|++ +.+|+++|.++|++||.|.+|++... . ....|||+|.+.++|..|+.. ++..+... .+.+
T Consensus 6 ~r~lfV~nLp--~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~~~~---~~~~ 79 (183)
T d1u1qa_ 6 LRKLFIGGLS--FETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGR---VVEP 79 (183)
T ss_dssp HHEEEEESCC--TTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEETTE---ECEE
T ss_pred CCEEEEECCC--CCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCccccc---chhh
Confidence 3689998665 69999999999999999999986532 1 123699999999999999985 45566665 4444
Q ss_pred Eee
Q 024708 135 SYS 137 (264)
Q Consensus 135 ~fS 137 (264)
...
T Consensus 80 ~~~ 82 (183)
T d1u1qa_ 80 KRA 82 (183)
T ss_dssp EEC
T ss_pred hhh
Confidence 443
No 88
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.18 E-value=2.2e-06 Score=61.83 Aligned_cols=60 Identities=23% Similarity=0.343 Sum_probs=52.9
Q ss_pred HHHHHHHhccCCeeEEEEEcCCC-CceEEEEeCCHHHHHHHHHHhcCCeeCCCccceEEEEeee
Q 024708 76 DVLHMVFSAFGPVQKIAMFDKNG-GLQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSR 138 (264)
Q Consensus 76 d~L~~LFs~yG~V~rIkif~K~~-g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~c~LrV~fSK 138 (264)
+.|.++|+++|.|.+|.++.-++ .+.|-|++.+.++|+.|++.|+..+|..+ +|.|+|+.
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~K---RI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSK---KILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTE---EEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCe---EEEEEEec
Confidence 34778999999999999976554 36799999999999999999999999998 99999864
No 89
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15 E-value=3.4e-07 Score=69.38 Aligned_cols=36 Identities=50% Similarity=0.840 Sum_probs=33.9
Q ss_pred CCeEEEEeecCCCcceeecCCCCCCCCCCCCCCCCc
Q 024708 2 GPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAP 37 (264)
Q Consensus 2 gCCtL~I~ySk~~~L~Vk~nn~~srDYTnp~Lp~~~ 37 (264)
+||.|+|+||+++++++++|++++||||+|+||.+|
T Consensus 73 ~~~~l~v~~s~~~~~~~~~~~~~~rDy~~p~~p~gd 108 (108)
T d2adba1 73 ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGD 108 (108)
T ss_dssp TCCCCEEEECSSCSCCCCCTTTTEEESSSSSCCCSC
T ss_pred CCcEEEEEecCCccccccccCccCCcCCCCCCCCCC
Confidence 589999999999999999999999999999999764
No 90
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.73 E-value=5.4e-05 Score=56.91 Aligned_cols=72 Identities=14% Similarity=0.290 Sum_probs=57.4
Q ss_pred CCCcEEEEEEccCCcc----cCH---HHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCCeeCCCcc
Q 024708 57 PESNVLLASIENMQYA----VTL---DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGHCIYDGGF 129 (264)
Q Consensus 57 ~~s~VL~V~~lN~~~~----VT~---d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~~ 129 (264)
|+--+++|.+.+...+ ..+ ++|.+.|+.||+|.=|+++.. +.+|.|.|-++|.+|++ |+|.+++++
T Consensus 13 PpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~d----~mwVTF~dG~SAL~al~-l~g~~v~G~-- 85 (95)
T d1ufwa_ 13 PLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQG----QMLVTFADSHSALSVLD-VDGMKVKGR-- 85 (95)
T ss_dssp CTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEETT----EEEEECSCSHHHHHHHH-GGGSEETTE--
T ss_pred CCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeCC----eEEEEECCcHHHHHHhc-cCCeEEcce--
Confidence 5666888888874211 122 468899999999999998853 69999999999998885 999999999
Q ss_pred ceEEEEe
Q 024708 130 CKLHISY 136 (264)
Q Consensus 130 c~LrV~f 136 (264)
+|+|+-
T Consensus 86 -~l~It~ 91 (95)
T d1ufwa_ 86 -AVKISG 91 (95)
T ss_dssp -EEEEEC
T ss_pred -EEEEec
Confidence 888863
No 91
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.32 E-value=1.3 Score=31.89 Aligned_cols=79 Identities=9% Similarity=0.161 Sum_probs=59.2
Q ss_pred EEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCC------CCceEEEEeCCHHHHHHHHHHhcCCeeCCCc--cceE
Q 024708 61 VLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKN------GGLQALIQYPDVQTAVVAKEALEGHCIYDGG--FCKL 132 (264)
Q Consensus 61 VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~------~g~~AfVqF~d~e~A~~A~~~LnG~~I~g~~--~c~L 132 (264)
-|.|..|++ .+|++++.+.++..|.+........+ .---|+|.|.+.++...-.+..+|+.+.+.. ...-
T Consensus 3 KvVvRrLPP--~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a 80 (91)
T d1uw4a_ 3 KVVIRRLPP--TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPA 80 (91)
T ss_dssp EEEEEEECT--TCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEEC
T ss_pred eEEEecCCC--CCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeee
Confidence 466777765 99999999999999998887654322 1135999999999999999999999987651 1133
Q ss_pred EEEeeeCCC
Q 024708 133 HISYSRHTD 141 (264)
Q Consensus 133 rV~fSK~~~ 141 (264)
.|+||--++
T Consensus 81 ~VE~AP~qk 89 (91)
T d1uw4a_ 81 IVEFAPFQK 89 (91)
T ss_dssp EEEECSSCC
T ss_pred EEEEcCccc
Confidence 577765443
No 92
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.10 E-value=0.51 Score=35.00 Aligned_cols=56 Identities=21% Similarity=0.283 Sum_probs=43.9
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhc
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALE 120 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~Ln 120 (264)
...|.++.- +..-...+|.+||+.||.|.=-.| +.. .|||...+.++|+.++..++
T Consensus 15 RdHVf~~tF---P~~Wk~~dI~~lFSpfG~V~VswI-ddT---Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 15 RDHVLHVTF---PKEWKTSDLYQLFSAFGNIQISWI-DDT---SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCSEEEEEC---CTTCCHHHHHHHHTTTCSCCCEEE-ETT---EEEEECSCHHHHHHHHHHHH
T ss_pred cceeEEEeC---CcccchhHHHHHhcCCCceEEEEe-cCc---eEEEEecCHHHHHHHHHHhc
Confidence 446777763 257889999999999998864334 333 79999999999999998776
No 93
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=69.70 E-value=8.5 Score=26.03 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=42.7
Q ss_pred CCcEEEEEEccCCcccCHHHHHHHHhccC-CeeEEEEEcCCCCceEEEEeC----CHHHHHHHHHHhcC
Q 024708 58 ESNVLLASIENMQYAVTLDVLHMVFSAFG-PVQKIAMFDKNGGLQALIQYP----DVQTAVVAKEALEG 121 (264)
Q Consensus 58 ~s~VL~V~~lN~~~~VT~d~L~~LFs~yG-~V~rIkif~K~~g~~AfVqF~----d~e~A~~A~~~LnG 121 (264)
++..|+|.+.|- +=-...+-.+|+..| +|..+.+.++.++..|++.++ -.++...+++.+.|
T Consensus 2 eG~~L~i~~~D~--PGvi~~I~~~l~~~~iNI~~m~~~~~~~g~~a~~vi~vD~~~~~~vl~~I~~~~~ 68 (78)
T d1ygya3 2 QGINLIIHYVDR--PGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAAAVD 68 (78)
T ss_dssp CSEEEEEEESCC--TTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHHHHHHHHHHT
T ss_pred CceEEEEEeCCc--CCHHHHHHHHHHhcCcChhhheeeecCCCCeEEEEEEcCCCccHHHHHHHHcCCC
Confidence 457888888774 555677889999999 888888766554545654433 24556667777765
No 94
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.67 E-value=2.2 Score=29.96 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=25.2
Q ss_pred eEEEEeecCCCcceeecCC----CCCCCCCCCCCCCC
Q 024708 4 CTLRITYSAHTDLSVKFQS----HRSRDYTNPYLPVA 36 (264)
Q Consensus 4 CtL~I~ySk~~~L~Vk~nn----~~srDYTnp~Lp~~ 36 (264)
.+|+|+||+..++....+. ..++||++..+.+.
T Consensus 68 ~~l~v~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~rf 104 (109)
T d2adca1 68 KPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRF 104 (109)
T ss_dssp SBCEEECCSCCCCCCCCSSSSTTTTEEECTTCSSCCC
T ss_pred EEEEEEECCCCCCCCCCccccCCCcccccCCCCCCCC
Confidence 4799999999988776653 45788888776654
No 95
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=44.51 E-value=18 Score=26.10 Aligned_cols=41 Identities=12% Similarity=0.165 Sum_probs=31.6
Q ss_pred HHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcC
Q 024708 76 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEG 121 (264)
Q Consensus 76 d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG 121 (264)
.++.+.+..+|.+ . +..+ |-+.|..|+|.++|..|.+.|..
T Consensus 60 ~~~~~~L~~~g~~---~-MSGS-GstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---R-LTGT-GACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSCE---E-ECTT-SSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhcccc---e-ecCC-CCEEEEEeCCHHHHHHHHHHcCc
Confidence 3566777888863 3 4555 45799999999999999999853
No 96
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=39.92 E-value=48 Score=22.10 Aligned_cols=59 Identities=20% Similarity=0.169 Sum_probs=37.2
Q ss_pred cEEEEEEccCCcccCHHHHHHHHhccC-CeeEEEEEcCCCCceEEEEeC-CHHHHHHHHHHhc
Q 024708 60 NVLLASIENMQYAVTLDVLHMVFSAFG-PVQKIAMFDKNGGLQALIQYP-DVQTAVVAKEALE 120 (264)
Q Consensus 60 ~VL~V~~lN~~~~VT~d~L~~LFs~yG-~V~rIkif~K~~g~~AfVqF~-d~e~A~~A~~~Ln 120 (264)
.-|.|.+.|. +=-...+-++|+..| +|..+..-++.++.+|++-++ |.+..+.+++.|.
T Consensus 12 ~rl~i~~~d~--PGvla~I~~~l~~~~iNI~~~~~~~~~~~~~a~~~i~~D~~~~~~v~~~i~ 72 (84)
T d1sc6a3 12 RRLMHIHENR--PGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMK 72 (84)
T ss_dssp EEEEEEEESC--TTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEECCHHHHHHHHHHHH
T ss_pred eEEEEEeCCc--CCHHHHHHHHHHHcCCCHHHhccccCCCCcEEEEEEECCCCCHHHHHHHHH
Confidence 4566666664 444566778888887 777777665555457886664 4344444555554
No 97
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=31.72 E-value=62 Score=21.00 Aligned_cols=60 Identities=17% Similarity=0.136 Sum_probs=37.3
Q ss_pred EEEEEEccCCcccCHHHHHHHHhccC-CeeEEEEEcCCCCceEEE--EeCCHHHHHHHHHHhcCCeeC
Q 024708 61 VLLASIENMQYAVTLDVLHMVFSAFG-PVQKIAMFDKNGGLQALI--QYPDVQTAVVAKEALEGHCIY 125 (264)
Q Consensus 61 VL~V~~lN~~~~VT~d~L~~LFs~yG-~V~rIkif~K~~g~~AfV--qF~d~e~A~~A~~~LnG~~I~ 125 (264)
||-|.+.|- .=....+-++|+..| +|+-+..|...+ .|.+ ..+|++.|..+++. +|..+.
T Consensus 1 ViaV~v~d~--pG~L~~v~~~L~~~~InI~~~y~~~~~~--~~~~vl~vdd~~~a~~~L~~-~G~~vl 63 (71)
T d2f06a1 1 VVGISCPNV--PGALAKVLGFLSAEGVFIEYMYSFANNN--VANVVIRPSNMDKCIEVLKE-KKVDLL 63 (71)
T ss_dssp EEEEEEESS--TTHHHHHHHHHHHTTCCEEEEEEEEETT--EEEEEEEESCHHHHHHHHHH-TTCEEE
T ss_pred CEEEEecCC--ccHHHHHHHHHHHCCCCEEEEEEEcCCC--cEEEEEEECCHHHHHHHHHH-CCCEEE
Confidence 455665553 455667778899888 788888776543 4554 44666666666553 454443
No 98
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=29.76 E-value=57 Score=22.73 Aligned_cols=44 Identities=18% Similarity=0.116 Sum_probs=33.1
Q ss_pred HHHHHHHhccCCeeEEEEEcCCCCceEEEEeCCHHHHHHHHHHhcCC
Q 024708 76 DVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVVAKEALEGH 122 (264)
Q Consensus 76 d~L~~LFs~yG~V~rIkif~K~~g~~AfVqF~d~e~A~~A~~~LnG~ 122 (264)
+++++.+..+|... + .+..+ |-+.|..|++.++|+.|.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~-~mSGS-Gst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-V-LMSGS-GSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-E-EECTT-SSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-e-eecCC-CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 56667777888643 3 34555 447999999999999999999764
Done!