Query 024709
Match_columns 264
No_of_seqs 163 out of 1283
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 13:04:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024709.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024709hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4drs_A Pyruvate kinase; glycol 100.0 1.2E-84 4E-89 632.0 25.0 257 5-264 263-526 (526)
2 3khd_A Pyruvate kinase; malari 100.0 2.2E-82 7.6E-87 613.7 23.9 258 3-263 255-519 (520)
3 3gr4_A Pyruvate kinase isozyme 100.0 8.6E-82 2.9E-86 612.9 22.3 259 3-264 280-550 (550)
4 3gg8_A Pyruvate kinase; malari 100.0 7.4E-82 2.5E-86 609.5 21.7 258 4-264 247-511 (511)
5 3hqn_D Pyruvate kinase, PK; TI 100.0 6.7E-82 2.3E-86 609.0 20.4 258 4-264 231-499 (499)
6 3t05_A Pyruvate kinase, PK; te 100.0 7.5E-81 2.5E-85 613.7 22.3 256 4-264 232-494 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 2.5E-80 8.7E-85 595.7 24.7 253 4-263 212-470 (470)
8 2e28_A Pyruvate kinase, PK; al 100.0 1.1E-78 3.6E-83 598.9 24.5 254 5-263 214-474 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 1.3E-77 4.5E-82 573.4 23.8 236 4-261 222-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 7.8E-75 2.7E-79 561.6 23.8 257 4-263 232-500 (500)
11 1izc_A Macrophomate synthase i 99.6 7.1E-16 2.4E-20 143.2 2.1 112 4-130 175-301 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.4 2E-15 6.9E-20 135.7 -4.1 88 5-106 144-239 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.4 5.5E-14 1.9E-18 127.7 2.1 89 4-106 164-260 (287)
14 1dxe_A 2-dehydro-3-deoxy-galac 99.4 2.3E-13 7.7E-18 121.5 4.6 89 4-106 143-239 (256)
15 3qz6_A HPCH/HPAI aldolase; str 99.3 1.7E-12 5.9E-17 116.3 5.1 91 4-107 141-239 (261)
16 1sgj_A Citrate lyase, beta sub 99.0 1.8E-10 6.3E-15 103.9 4.2 90 6-103 121-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 98.9 5.8E-10 2E-14 102.8 4.2 92 4-106 172-279 (324)
18 2ols_A Phosphoenolpyruvate syn 98.6 1.9E-08 6.4E-13 102.6 3.3 91 6-106 673-779 (794)
19 2wqd_A Phosphoenolpyruvate-pro 98.6 3.1E-08 1.1E-12 97.6 4.7 91 4-105 423-529 (572)
20 2hwg_A Phosphoenolpyruvate-pro 98.6 4.7E-08 1.6E-12 96.3 5.7 92 4-106 421-528 (575)
21 1u5h_A CITE; TIM barrel, struc 98.5 1.1E-07 3.8E-12 85.4 5.5 92 6-104 104-209 (273)
22 3qll_A Citrate lyase; beta bar 98.4 2.2E-07 7.5E-12 85.3 4.5 90 4-103 155-255 (316)
23 3qqw_A Putative citrate lyase; 98.3 5.6E-07 1.9E-11 83.0 5.0 89 5-103 144-254 (332)
24 3r4i_A Citrate lyase; TIM beta 98.2 9.6E-07 3.3E-11 81.7 5.0 89 5-103 143-253 (339)
25 1vbg_A Pyruvate,orthophosphate 97.9 7.4E-06 2.5E-10 84.2 5.0 90 6-106 742-862 (876)
26 3oyz_A Malate synthase; TIM ba 97.8 1.3E-05 4.5E-10 76.1 4.8 89 6-104 150-259 (433)
27 1kbl_A PPDK, pyruvate phosphat 97.6 3.3E-05 1.1E-09 79.4 4.7 90 6-106 736-856 (873)
28 1vp8_A Hypothetical protein AF 96.6 0.016 5.6E-07 49.3 10.2 107 153-261 27-177 (201)
29 1t57_A Conserved protein MTH16 96.3 0.021 7.3E-07 48.7 9.2 106 154-261 36-184 (206)
30 1h6z_A Pyruvate phosphate diki 95.5 0.019 6.4E-07 59.3 6.9 90 6-106 762-882 (913)
31 3cuz_A MSA, malate synthase A; 95.3 0.018 6.2E-07 56.1 5.6 95 5-104 240-366 (532)
32 3cux_A Malate synthase; TIM ba 94.7 0.01 3.5E-07 57.7 1.9 94 5-105 237-365 (528)
33 1p7t_A MSG, malate synthase G; 93.6 0.025 8.5E-07 56.6 2.2 95 5-106 418-538 (731)
34 2x0s_A Pyruvate phosphate diki 91.4 0.68 2.3E-05 47.8 9.5 90 6-106 762-882 (913)
35 4af0_A Inosine-5'-monophosphat 85.0 2 6.9E-05 41.8 7.4 81 9-105 326-414 (556)
36 1wv2_A Thiazole moeity, thiazo 83.0 3 0.0001 36.9 7.1 81 29-125 157-237 (265)
37 1ko7_A HPR kinase/phosphatase; 79.5 1.8 6.2E-05 39.2 4.6 88 4-112 47-158 (314)
38 1vhc_A Putative KHG/KDPG aldol 78.1 2.7 9.3E-05 36.0 5.1 37 53-103 100-136 (224)
39 4e38_A Keto-hydroxyglutarate-a 77.7 2.2 7.5E-05 37.0 4.4 73 14-103 68-153 (232)
40 2yw3_A 4-hydroxy-2-oxoglutarat 76.8 2.9 0.0001 35.1 4.8 36 54-103 95-130 (207)
41 3g8r_A Probable spore coat pol 76.5 8.6 0.00029 35.3 8.2 81 7-113 92-174 (350)
42 1mxs_A KDPG aldolase; 2-keto-3 76.5 4.2 0.00014 34.8 5.8 43 53-117 109-151 (225)
43 4fxs_A Inosine-5'-monophosphat 73.7 7.1 0.00024 37.3 7.2 82 7-104 273-363 (496)
44 3usb_A Inosine-5'-monophosphat 73.0 5.9 0.0002 38.0 6.4 83 7-105 298-389 (511)
45 1xm3_A Thiazole biosynthesis p 69.8 25 0.00084 30.4 9.3 93 21-129 139-232 (264)
46 3inp_A D-ribulose-phosphate 3- 68.9 10 0.00035 33.0 6.5 93 18-124 146-243 (246)
47 1ydn_A Hydroxymethylglutaryl-C 68.4 8.6 0.00029 33.8 6.0 111 6-125 72-195 (295)
48 1f76_A Dihydroorotate dehydrog 68.2 10 0.00035 33.8 6.6 88 6-105 211-319 (336)
49 4avf_A Inosine-5'-monophosphat 67.8 6.5 0.00022 37.4 5.5 84 6-105 270-362 (490)
50 1wbh_A KHG/KDPG aldolase; lyas 67.5 7.1 0.00024 33.0 5.1 37 53-103 99-135 (214)
51 2htm_A Thiazole biosynthesis p 67.5 7.4 0.00025 34.5 5.3 95 14-125 133-228 (268)
52 1me8_A Inosine-5'-monophosphat 67.5 13 0.00043 35.5 7.4 81 9-105 288-382 (503)
53 3ffs_A Inosine-5-monophosphate 67.3 9.2 0.00032 35.6 6.2 83 6-104 184-275 (400)
54 1w8s_A FBP aldolase, fructose- 67.0 11 0.00038 32.8 6.4 73 20-104 96-179 (263)
55 3m5v_A DHDPS, dihydrodipicolin 66.9 22 0.00076 31.3 8.5 101 17-128 28-134 (301)
56 1ub3_A Aldolase protein; schif 65.9 30 0.001 29.4 8.8 102 63-181 52-156 (220)
57 3khj_A Inosine-5-monophosphate 65.5 14 0.00047 33.8 7.0 83 6-104 145-236 (361)
58 2z6i_A Trans-2-enoyl-ACP reduc 63.5 21 0.00072 31.8 7.7 80 6-104 110-191 (332)
59 2c6q_A GMP reductase 2; TIM ba 63.2 18 0.0006 32.9 7.2 83 7-105 162-253 (351)
60 3pfn_A NAD kinase; structural 63.2 3.2 0.00011 38.4 2.2 35 166-200 243-281 (365)
61 3f4w_A Putative hexulose 6 pho 61.7 11 0.00037 30.9 5.1 91 19-125 117-208 (211)
62 2ftp_A Hydroxymethylglutaryl-C 61.5 83 0.0028 27.5 12.9 126 87-217 86-232 (302)
63 2wkj_A N-acetylneuraminate lya 61.1 46 0.0016 29.3 9.4 101 16-128 31-137 (303)
64 2gn0_A Threonine dehydratase c 60.8 73 0.0025 28.3 10.9 120 53-202 101-225 (342)
65 2wqp_A Polysialic acid capsule 59.9 33 0.0011 31.3 8.4 82 7-114 105-188 (349)
66 4fo4_A Inosine 5'-monophosphat 59.7 22 0.00076 32.6 7.2 84 6-105 149-241 (366)
67 1ve1_A O-acetylserine sulfhydr 59.1 50 0.0017 28.6 9.3 123 53-203 75-204 (304)
68 1v8a_A Hydroxyethylthiazole ki 58.9 11 0.00037 32.7 4.8 45 19-68 47-91 (265)
69 3glc_A Aldolase LSRF; TIM barr 58.7 33 0.0011 30.5 8.0 154 18-200 71-231 (295)
70 3r2g_A Inosine 5'-monophosphat 58.7 26 0.0009 32.1 7.6 79 6-104 141-228 (361)
71 3dwg_A Cysteine synthase B; su 58.5 33 0.0011 30.4 8.1 127 50-202 83-214 (325)
72 3l6b_A Serine racemase; pyrido 58.1 69 0.0023 28.6 10.2 122 52-203 88-214 (346)
73 1jcn_A Inosine monophosphate d 57.9 39 0.0013 31.9 8.9 84 6-105 296-388 (514)
74 1h1y_A D-ribulose-5-phosphate 57.7 48 0.0016 27.6 8.6 101 8-125 115-222 (228)
75 1p5j_A L-serine dehydratase; l 57.5 67 0.0023 29.0 10.1 121 53-202 106-233 (372)
76 3vzx_A Heptaprenylglyceryl pho 57.1 7.3 0.00025 33.6 3.3 168 20-221 22-209 (228)
77 3flu_A DHDPS, dihydrodipicolin 57.0 54 0.0019 28.7 9.2 100 17-128 28-133 (297)
78 3hgm_A Universal stress protei 56.8 19 0.00064 26.9 5.3 41 157-198 98-147 (147)
79 3qze_A DHDPS, dihydrodipicolin 56.7 46 0.0016 29.6 8.7 100 17-128 44-149 (314)
80 1yad_A Regulatory protein TENI 55.8 66 0.0023 26.3 9.1 83 29-125 131-213 (221)
81 3ovp_A Ribulose-phosphate 3-ep 55.5 36 0.0012 28.8 7.4 92 18-127 124-220 (228)
82 3w01_A Heptaprenylglyceryl pho 55.4 8.4 0.00029 33.4 3.4 60 19-103 26-86 (235)
83 3tbh_A O-acetyl serine sulfhyd 55.0 33 0.0011 30.5 7.5 128 50-203 82-215 (334)
84 1f6k_A N-acetylneuraminate lya 55.0 56 0.0019 28.5 8.9 101 16-128 23-130 (293)
85 1jqo_A Phosphoenolpyruvate car 54.9 8.5 0.00029 40.0 3.9 65 5-69 557-638 (970)
86 2r8w_A AGR_C_1641P; APC7498, d 54.9 62 0.0021 28.9 9.3 102 16-128 54-160 (332)
87 3odm_A Pepcase, PEPC, phosphoe 54.8 3.9 0.00013 39.8 1.2 64 5-68 179-259 (560)
88 2z08_A Universal stress protei 54.7 29 0.00099 25.6 6.1 41 157-198 87-136 (137)
89 2ehh_A DHDPS, dihydrodipicolin 54.6 89 0.0031 27.2 10.2 100 17-128 21-126 (294)
90 1n7k_A Deoxyribose-phosphate a 54.5 21 0.0007 30.8 5.8 65 47-124 117-191 (234)
91 3tnj_A Universal stress protei 54.4 22 0.00076 26.6 5.5 45 157-202 97-149 (150)
92 3nvt_A 3-deoxy-D-arabino-heptu 54.1 24 0.00081 32.7 6.5 76 7-104 207-283 (385)
93 1tdj_A Biosynthetic threonine 53.4 1.2E+02 0.0041 29.0 11.5 119 54-202 93-216 (514)
94 3dzv_A 4-methyl-5-(beta-hydrox 53.3 18 0.00061 31.8 5.3 45 19-68 49-93 (273)
95 1xky_A Dihydrodipicolinate syn 53.0 83 0.0028 27.6 9.7 100 16-127 32-137 (301)
96 1mjh_A Protein (ATP-binding do 53.0 31 0.0011 26.2 6.2 44 157-201 108-160 (162)
97 1ivn_A Thioesterase I; hydrola 53.0 18 0.00061 28.4 4.8 55 16-70 48-106 (190)
98 3cpr_A Dihydrodipicolinate syn 52.9 82 0.0028 27.7 9.7 100 16-127 36-141 (304)
99 1tv5_A Dhodehase, dihydroorota 52.6 48 0.0016 31.1 8.4 109 6-132 296-425 (443)
100 3afo_A NADH kinase POS5; alpha 52.5 5.4 0.00019 37.1 1.8 35 167-201 226-264 (388)
101 2qjg_A Putative aldolase MJ040 52.4 24 0.00081 30.2 5.9 81 19-104 102-186 (273)
102 2ftp_A Hydroxymethylglutaryl-C 52.3 39 0.0013 29.7 7.4 112 7-125 77-199 (302)
103 3pc3_A CG1753, isoform A; CBS, 52.3 36 0.0012 32.3 7.6 128 53-203 126-259 (527)
104 3b4u_A Dihydrodipicolinate syn 52.2 42 0.0015 29.4 7.6 99 17-127 24-129 (294)
105 3eod_A Protein HNR; response r 52.0 42 0.0015 24.0 6.6 77 161-238 43-125 (130)
106 2yxg_A DHDPS, dihydrodipicolin 52.0 78 0.0027 27.5 9.3 101 16-128 20-126 (289)
107 2v9d_A YAGE; dihydrodipicolini 51.9 79 0.0027 28.4 9.5 101 16-127 51-156 (343)
108 2o55_A Putative glycerophospho 51.8 14 0.00049 31.4 4.3 57 52-124 201-257 (258)
109 1p1x_A Deoxyribose-phosphate a 51.7 47 0.0016 29.0 7.7 72 46-126 117-192 (260)
110 3dz1_A Dihydrodipicolinate syn 51.5 61 0.0021 28.6 8.6 98 17-128 29-132 (313)
111 4aec_A Cysteine synthase, mito 51.3 54 0.0019 30.6 8.6 127 50-202 185-317 (430)
112 1kbi_A Cytochrome B2, L-LCR; f 50.9 39 0.0013 32.3 7.6 84 6-105 343-433 (511)
113 2rkb_A Serine dehydratase-like 50.7 1.2E+02 0.004 26.4 10.3 120 53-202 67-193 (318)
114 1ve5_A Threonine deaminase; ri 50.5 76 0.0026 27.5 9.0 120 53-202 78-206 (311)
115 1gte_A Dihydropyrimidine dehyd 50.4 16 0.00055 37.8 5.1 86 6-106 703-818 (1025)
116 2qr6_A IMP dehydrogenase/GMP r 50.3 21 0.00073 32.5 5.5 84 7-106 212-308 (393)
117 2rfg_A Dihydrodipicolinate syn 49.9 69 0.0024 28.1 8.7 100 17-128 21-126 (297)
118 3daq_A DHDPS, dihydrodipicolin 49.6 1.1E+02 0.0037 26.7 9.9 100 17-128 23-128 (292)
119 1y7l_A O-acetylserine sulfhydr 49.6 69 0.0024 27.9 8.6 124 53-203 75-207 (316)
120 1eep_A Inosine 5'-monophosphat 49.4 43 0.0015 30.6 7.5 69 17-106 153-224 (404)
121 1z7w_A Cysteine synthase; tran 49.3 64 0.0022 28.3 8.4 127 51-203 78-210 (322)
122 3l49_A ABC sugar (ribose) tran 49.1 1.1E+02 0.0038 25.2 13.4 42 19-70 51-93 (291)
123 1o66_A 3-methyl-2-oxobutanoate 48.9 62 0.0021 28.6 8.0 60 163-223 168-234 (275)
124 1xi3_A Thiamine phosphate pyro 48.8 90 0.0031 25.0 8.7 52 61-125 160-211 (215)
125 1vcv_A Probable deoxyribose-ph 48.5 26 0.00089 30.0 5.4 73 46-127 98-181 (226)
126 2vc6_A MOSA, dihydrodipicolina 48.4 69 0.0024 27.9 8.4 100 17-128 21-126 (292)
127 2ojp_A DHDPS, dihydrodipicolin 48.3 77 0.0026 27.6 8.7 101 16-127 21-126 (292)
128 2pqm_A Cysteine synthase; OASS 48.2 58 0.002 29.0 8.0 125 53-203 91-221 (343)
129 3bo9_A Putative nitroalkan dio 48.0 54 0.0018 29.1 7.7 81 6-104 124-205 (326)
130 3tak_A DHDPS, dihydrodipicolin 47.7 93 0.0032 27.0 9.1 100 17-128 22-127 (291)
131 2dum_A Hypothetical protein PH 47.6 40 0.0014 25.9 6.1 45 157-202 105-158 (170)
132 1tq8_A Hypothetical protein RV 47.2 40 0.0014 26.1 6.0 45 157-202 107-160 (163)
133 4h27_A L-serine dehydratase/L- 47.2 64 0.0022 29.0 8.2 121 53-202 106-233 (364)
134 3i42_A Response regulator rece 46.6 67 0.0023 22.7 6.9 67 161-228 39-112 (127)
135 1o5k_A DHDPS, dihydrodipicolin 46.6 93 0.0032 27.3 9.0 100 16-127 32-137 (306)
136 2fli_A Ribulose-phosphate 3-ep 46.5 47 0.0016 27.0 6.7 91 19-123 122-217 (220)
137 3l21_A DHDPS, dihydrodipicolin 45.8 89 0.003 27.5 8.7 99 17-127 36-140 (304)
138 1jbq_A B, cystathionine beta-s 45.6 54 0.0019 30.6 7.6 128 53-203 174-307 (435)
139 1z0s_A Probable inorganic poly 45.5 7.3 0.00025 34.5 1.4 35 166-200 169-207 (278)
140 2cw6_A Hydroxymethylglutaryl-C 45.4 58 0.002 28.4 7.4 80 44-127 115-198 (298)
141 1y0e_A Putative N-acetylmannos 44.9 88 0.003 25.4 8.1 77 29-121 140-218 (223)
142 2v03_A Cysteine synthase B; py 44.7 75 0.0026 27.6 8.0 125 52-203 73-203 (303)
143 3d0c_A Dihydrodipicolinate syn 44.6 55 0.0019 29.0 7.2 100 16-128 32-137 (314)
144 3vk5_A MOEO5; TIM barrel, tran 44.6 40 0.0014 30.0 6.1 79 16-116 53-134 (286)
145 3nhm_A Response regulator; pro 44.5 82 0.0028 22.4 8.5 68 162-230 40-114 (133)
146 2ekc_A AQ_1548, tryptophan syn 44.5 67 0.0023 27.5 7.5 79 17-104 32-129 (262)
147 3fdx_A Putative filament prote 43.9 50 0.0017 24.3 5.9 41 157-198 94-142 (143)
148 1geq_A Tryptophan synthase alp 43.5 70 0.0024 26.6 7.4 83 20-124 99-187 (248)
149 3grc_A Sensor protein, kinase; 43.5 89 0.003 22.5 8.9 76 161-238 42-126 (140)
150 3si9_A DHDPS, dihydrodipicolin 43.3 95 0.0032 27.5 8.5 100 17-128 43-148 (315)
151 1v71_A Serine racemase, hypoth 43.2 91 0.0031 27.2 8.4 120 53-202 87-211 (323)
152 3s3t_A Nucleotide-binding prot 43.2 46 0.0016 24.6 5.7 41 157-198 95-145 (146)
153 1vli_A Spore coat polysacchari 43.1 57 0.0019 30.2 7.1 70 22-114 127-199 (385)
154 3lab_A Putative KDPG (2-keto-3 42.5 12 0.0004 32.1 2.2 74 14-104 47-139 (217)
155 4ew6_A D-galactose-1-dehydroge 42.4 62 0.0021 28.4 7.2 84 19-126 69-156 (330)
156 1ypf_A GMP reductase; GUAC, pu 42.3 56 0.0019 29.1 6.9 125 52-209 83-230 (336)
157 3tfx_A Orotidine 5'-phosphate 42.3 9.8 0.00034 33.3 1.7 78 47-124 141-236 (259)
158 3u7r_A NADPH-dependent FMN red 42.3 41 0.0014 27.6 5.6 52 14-70 53-111 (190)
159 1jcn_A Inosine monophosphate d 42.2 1.1E+02 0.0036 28.9 9.1 66 17-105 255-325 (514)
160 3ks6_A Glycerophosphoryl diest 42.1 48 0.0016 28.1 6.1 53 51-123 192-244 (250)
161 1p0k_A Isopentenyl-diphosphate 42.1 42 0.0015 29.9 6.1 85 6-105 178-281 (349)
162 2qr3_A Two-component system re 41.9 93 0.0032 22.2 8.2 74 163-238 41-125 (140)
163 3qja_A IGPS, indole-3-glycerol 41.7 49 0.0017 28.8 6.2 62 22-105 128-190 (272)
164 3h5i_A Response regulator/sens 41.6 98 0.0034 22.4 8.8 54 168-222 49-109 (140)
165 3f6c_A Positive transcription 41.4 93 0.0032 22.1 8.0 74 165-240 42-121 (134)
166 2xhz_A KDSD, YRBH, arabinose 5 41.3 17 0.00058 28.8 2.9 34 169-203 96-134 (183)
167 1wa3_A 2-keto-3-deoxy-6-phosph 41.3 25 0.00087 28.5 4.1 54 23-104 77-131 (205)
168 1tzb_A Glucose-6-phosphate iso 41.3 17 0.00059 31.8 3.2 37 169-206 79-120 (302)
169 3eeg_A 2-isopropylmalate synth 41.2 56 0.0019 29.2 6.7 88 32-126 100-192 (325)
170 2q3b_A Cysteine synthase A; py 41.1 1.5E+02 0.0051 25.6 9.5 124 53-203 80-210 (313)
171 3u3x_A Oxidoreductase; structu 41.0 61 0.0021 28.9 7.0 85 19-126 77-164 (361)
172 3hpd_A Hydroxyethylthiazole ki 40.8 35 0.0012 29.9 5.1 44 20-68 48-91 (265)
173 3olq_A Universal stress protei 40.8 1.2E+02 0.0043 25.5 8.8 74 157-239 99-190 (319)
174 3na8_A Putative dihydrodipicol 40.6 90 0.0031 27.6 7.9 100 17-128 45-150 (315)
175 1oy0_A Ketopantoate hydroxymet 40.6 60 0.0021 28.7 6.6 69 164-233 187-262 (281)
176 3zwt_A Dihydroorotate dehydrog 40.3 50 0.0017 30.1 6.3 110 5-132 219-350 (367)
177 3qvq_A Phosphodiesterase OLEI0 40.3 38 0.0013 28.7 5.2 50 52-121 199-248 (252)
178 3fkr_A L-2-keto-3-deoxyarabona 40.3 1.3E+02 0.0044 26.4 8.9 100 17-128 29-137 (309)
179 1vrd_A Inosine-5'-monophosphat 40.1 42 0.0014 31.4 5.9 63 29-104 300-369 (494)
180 2qv0_A Protein MRKE; structura 40.0 1E+02 0.0035 22.2 7.9 77 163-240 49-132 (143)
181 3igs_A N-acetylmannosamine-6-p 40.0 53 0.0018 27.8 6.1 50 62-126 180-229 (232)
182 3ngj_A Deoxyribose-phosphate a 39.9 1.8E+02 0.0061 24.9 10.3 140 38-197 32-205 (239)
183 2egu_A Cysteine synthase; O-ac 39.5 90 0.0031 27.0 7.7 126 51-203 76-207 (308)
184 2gm3_A Unknown protein; AT3G01 39.3 57 0.0019 25.1 5.8 45 157-202 112-165 (175)
185 3ie7_A LIN2199 protein; phosph 39.2 64 0.0022 27.7 6.6 64 22-105 127-190 (320)
186 3sho_A Transcriptional regulat 39.2 17 0.00059 28.9 2.7 34 169-203 87-125 (187)
187 2gjl_A Hypothetical protein PA 39.2 54 0.0019 28.9 6.2 60 20-106 87-147 (328)
188 1q77_A Hypothetical protein AQ 39.1 32 0.0011 25.3 4.1 41 157-198 97-137 (138)
189 3loq_A Universal stress protei 39.1 72 0.0025 26.9 6.9 38 164-202 118-164 (294)
190 3eqz_A Response regulator; str 39.0 52 0.0018 23.4 5.2 67 170-238 47-124 (135)
191 1ypf_A GMP reductase; GUAC, pu 38.8 11 0.00038 33.9 1.5 38 57-106 204-241 (336)
192 3ip3_A Oxidoreductase, putativ 38.7 79 0.0027 27.6 7.2 85 19-126 56-144 (337)
193 3m2t_A Probable dehydrogenase; 38.6 77 0.0026 28.1 7.3 58 19-96 57-117 (359)
194 1vrd_A Inosine-5'-monophosphat 38.3 1.8E+02 0.0062 27.0 10.1 80 7-107 226-309 (494)
195 3i65_A Dihydroorotate dehydrog 38.0 56 0.0019 30.5 6.3 111 6-133 268-398 (415)
196 3ble_A Citramalate synthase fr 37.8 44 0.0015 30.0 5.4 78 45-126 132-210 (337)
197 3fg9_A Protein of universal st 37.7 43 0.0015 25.2 4.8 41 157-198 106-155 (156)
198 2wlt_A L-asparaginase; hydrola 37.5 28 0.00096 31.4 4.1 50 22-77 235-285 (332)
199 1wsa_A Asparaginase, asparagin 37.5 28 0.00096 31.4 4.1 50 22-77 232-282 (330)
200 1o58_A O-acetylserine sulfhydr 37.5 1.1E+02 0.0036 26.6 7.8 124 53-203 78-208 (303)
201 4e7p_A Response regulator; DNA 37.5 1.2E+02 0.0041 22.2 7.9 76 161-238 58-139 (150)
202 1jeo_A MJ1247, hypothetical pr 37.5 23 0.00079 27.9 3.2 33 170-203 83-120 (180)
203 3odp_A Putative tagatose-6-pho 37.4 13 0.00045 34.3 1.9 34 170-203 109-148 (393)
204 1o7j_A L-asparaginase; atomic 37.3 28 0.00097 31.3 4.1 50 22-77 234-284 (327)
205 2cu0_A Inosine-5'-monophosphat 37.3 37 0.0013 31.9 5.1 45 50-106 315-359 (486)
206 3f2b_A DNA-directed DNA polyme 37.3 71 0.0024 33.4 7.4 87 6-99 206-352 (1041)
207 1jmv_A USPA, universal stress 37.3 60 0.002 23.8 5.4 44 157-201 90-139 (141)
208 1qop_A Tryptophan synthase alp 37.0 53 0.0018 28.2 5.7 79 17-107 32-132 (268)
209 3igs_A N-acetylmannosamine-6-p 37.0 93 0.0032 26.2 7.1 62 20-102 92-154 (232)
210 3dwg_A Cysteine synthase B; su 36.9 2.1E+02 0.0073 24.9 10.5 87 153-240 52-146 (325)
211 3a5f_A Dihydrodipicolinate syn 36.8 58 0.002 28.4 6.0 80 16-107 21-106 (291)
212 1m3s_A Hypothetical protein YC 36.7 20 0.00069 28.5 2.7 32 170-202 80-116 (186)
213 2p10_A MLL9387 protein; putati 36.3 71 0.0024 28.4 6.4 70 25-104 179-259 (286)
214 1nns_A L-asparaginase II; amid 36.1 30 0.001 31.1 4.1 50 22-77 228-278 (326)
215 1jqn_A Pepcase, PEPC, phosphoe 36.1 14 0.00048 38.0 2.0 63 6-68 498-577 (883)
216 3sz8_A 2-dehydro-3-deoxyphosph 35.8 75 0.0026 28.1 6.5 76 8-105 93-169 (285)
217 4had_A Probable oxidoreductase 35.6 55 0.0019 28.7 5.7 84 19-126 75-161 (350)
218 1j0a_A 1-aminocyclopropane-1-c 35.6 78 0.0027 27.7 6.7 44 159-202 169-218 (325)
219 1zcc_A Glycerophosphodiester p 35.6 79 0.0027 26.6 6.5 56 47-122 177-234 (248)
220 3fij_A LIN1909 protein; 11172J 35.3 54 0.0019 27.8 5.4 47 22-68 55-113 (254)
221 3ewb_X 2-isopropylmalate synth 35.2 80 0.0028 27.7 6.6 118 44-181 115-233 (293)
222 3hp4_A GDSL-esterase; psychrot 35.2 30 0.001 26.7 3.5 55 16-70 52-110 (185)
223 3nl6_A Thiamine biosynthetic b 35.2 36 0.0012 32.9 4.6 43 19-68 296-339 (540)
224 2tps_A Protein (thiamin phosph 35.2 1.1E+02 0.0037 24.9 7.1 52 62-126 170-222 (227)
225 3l12_A Putative glycerophospho 34.9 47 0.0016 29.1 5.0 49 53-121 258-306 (313)
226 3dlo_A Universal stress protei 34.7 86 0.0029 23.9 6.1 41 157-198 105-154 (155)
227 3a10_A Response regulator; pho 34.7 1.1E+02 0.0038 21.0 8.3 59 163-222 39-102 (116)
228 2v5j_A 2,4-dihydroxyhept-2-ENE 34.7 96 0.0033 27.1 7.1 77 7-104 41-118 (287)
229 3e96_A Dihydrodipicolinate syn 34.4 1E+02 0.0034 27.3 7.2 101 17-129 33-138 (316)
230 3v5n_A Oxidoreductase; structu 34.4 69 0.0023 29.2 6.3 85 18-126 93-185 (417)
231 3e9m_A Oxidoreductase, GFO/IDH 34.3 78 0.0027 27.6 6.5 84 19-126 56-142 (330)
232 3ijp_A DHPR, dihydrodipicolina 34.3 1.1E+02 0.0037 27.0 7.3 85 20-132 80-164 (288)
233 3b2n_A Uncharacterized protein 34.2 1.3E+02 0.0043 21.5 7.6 72 164-237 44-121 (133)
234 2bdq_A Copper homeostasis prot 34.1 1.4E+02 0.0047 25.5 7.7 137 59-220 50-207 (224)
235 1ekq_A Hydroxyethylthiazole ki 34.0 46 0.0016 28.6 4.8 44 20-68 50-93 (272)
236 3q58_A N-acetylmannosamine-6-p 33.9 91 0.0031 26.2 6.6 63 19-102 91-154 (229)
237 2e5f_A Hypothetical protein PH 33.9 29 0.00099 30.7 3.5 29 171-201 81-112 (325)
238 3kux_A Putative oxidoreductase 33.9 1E+02 0.0035 27.0 7.2 84 19-126 56-142 (352)
239 2yva_A DNAA initiator-associat 33.8 23 0.0008 28.3 2.7 34 169-203 109-147 (196)
240 3nxk_A Cytoplasmic L-asparagin 33.7 32 0.0011 31.2 3.7 50 22-77 238-288 (334)
241 3cwc_A Putative glycerate kina 33.6 41 0.0014 31.2 4.5 58 9-69 268-325 (383)
242 3ctl_A D-allulose-6-phosphate 33.5 1.7E+02 0.0057 24.6 8.2 94 18-125 118-218 (231)
243 1p9o_A Phosphopantothenoylcyst 33.4 1.2E+02 0.0042 27.0 7.6 48 194-241 205-254 (313)
244 1tqx_A D-ribulose-5-phosphate 33.4 1.6E+02 0.0053 24.8 8.0 91 18-124 126-221 (227)
245 1ydo_A HMG-COA lyase; TIM-barr 33.3 76 0.0026 28.0 6.2 111 7-125 75-197 (307)
246 4fb5_A Probable oxidoreductase 33.3 68 0.0023 28.1 5.9 84 19-126 83-169 (393)
247 3iau_A Threonine deaminase; py 33.3 2.6E+02 0.0089 24.8 10.3 121 53-203 121-246 (366)
248 1h5y_A HISF; histidine biosynt 33.2 1.4E+02 0.0049 24.2 7.7 86 19-120 157-244 (253)
249 3eul_A Possible nitrate/nitrit 33.2 1.4E+02 0.0048 21.8 8.6 76 163-240 55-136 (152)
250 2gjl_A Hypothetical protein PA 33.2 1.2E+02 0.004 26.6 7.5 81 6-104 118-201 (328)
251 1vim_A Hypothetical protein AF 33.0 19 0.00065 29.4 2.0 33 170-203 90-127 (200)
252 3f4w_A Putative hexulose 6 pho 32.9 30 0.001 28.1 3.3 72 17-107 14-87 (211)
253 1tqj_A Ribulose-phosphate 3-ep 32.7 44 0.0015 28.1 4.3 91 19-122 125-219 (230)
254 2isw_A Putative fructose-1,6-b 32.3 31 0.001 31.3 3.4 99 7-113 76-182 (323)
255 1vcf_A Isopentenyl-diphosphate 32.2 61 0.0021 28.7 5.4 58 63-132 256-315 (332)
256 3eua_A Putative fructose-amino 32.2 22 0.00075 31.6 2.4 33 170-203 75-112 (329)
257 1x92_A APC5045, phosphoheptose 32.2 26 0.00087 28.2 2.7 33 169-202 113-150 (199)
258 1ka9_F Imidazole glycerol phos 32.1 2E+02 0.0067 23.7 8.4 85 19-120 155-242 (252)
259 3evn_A Oxidoreductase, GFO/IDH 32.1 70 0.0024 27.9 5.7 84 18-126 55-142 (329)
260 4f3y_A DHPR, dihydrodipicolina 32.1 47 0.0016 29.0 4.5 85 20-132 65-149 (272)
261 2rjn_A Response regulator rece 31.9 1.5E+02 0.0051 21.7 8.4 62 161-222 43-111 (154)
262 3c3j_A Putative tagatose-6-pho 31.9 23 0.0008 32.1 2.6 34 169-202 103-142 (384)
263 1ydn_A Hydroxymethylglutaryl-C 31.7 2.5E+02 0.0084 24.1 11.1 110 87-201 82-208 (295)
264 2nli_A Lactate oxidase; flavoe 31.7 57 0.0019 29.7 5.2 83 6-105 229-314 (368)
265 3o63_A Probable thiamine-phosp 31.7 1.4E+02 0.0046 25.5 7.3 51 62-125 190-240 (243)
266 2xbl_A Phosphoheptose isomeras 31.6 25 0.00085 28.1 2.5 33 169-202 116-153 (198)
267 4dad_A Putative pilus assembly 31.5 1.1E+02 0.0037 22.2 6.0 70 168-239 66-141 (146)
268 2hqr_A Putative transcriptiona 31.5 75 0.0026 25.3 5.5 77 161-239 36-115 (223)
269 1srr_A SPO0F, sporulation resp 31.4 1.2E+02 0.004 21.2 6.0 63 165-228 43-111 (124)
270 3sr7_A Isopentenyl-diphosphate 31.3 49 0.0017 30.2 4.7 110 6-132 206-338 (365)
271 3moi_A Probable dehydrogenase; 30.8 87 0.003 28.0 6.3 84 19-126 53-139 (387)
272 3fxa_A SIS domain protein; str 30.7 21 0.00072 28.9 1.9 33 170-203 93-130 (201)
273 3dty_A Oxidoreductase, GFO/IDH 30.5 1E+02 0.0035 27.7 6.7 84 19-126 69-160 (398)
274 1tk9_A Phosphoheptose isomeras 30.4 24 0.00083 27.9 2.2 34 169-203 110-148 (188)
275 2nwh_A AGR_C_3442P, carbohydra 30.2 73 0.0025 27.4 5.5 43 17-68 121-165 (317)
276 2nx9_A Oxaloacetate decarboxyl 30.0 3E+02 0.01 25.8 10.0 72 51-127 128-200 (464)
277 3kts_A Glycerol uptake operon 29.8 31 0.001 28.9 2.7 79 7-104 10-89 (192)
278 1eep_A Inosine 5'-monophosphat 29.8 92 0.0031 28.3 6.3 82 6-104 194-285 (404)
279 3idf_A USP-like protein; unive 29.7 50 0.0017 24.2 3.8 38 158-198 92-137 (138)
280 3jte_A Response regulator rece 29.5 1.6E+02 0.0053 21.1 8.4 61 167-228 47-113 (143)
281 3mz0_A Inositol 2-dehydrogenas 29.4 94 0.0032 27.1 6.1 84 19-126 55-142 (344)
282 3uuw_A Putative oxidoreductase 29.3 92 0.0031 26.7 6.0 58 19-96 57-115 (308)
283 3hzh_A Chemotaxis response reg 29.3 1.4E+02 0.0049 22.1 6.5 53 169-221 83-141 (157)
284 3etn_A Putative phosphosugar i 29.3 31 0.001 28.7 2.7 34 170-203 107-146 (220)
285 3cg4_A Response regulator rece 29.3 1.6E+02 0.0053 21.0 8.2 61 162-222 44-112 (142)
286 3v7e_A Ribosome-associated pro 29.3 58 0.002 22.9 3.8 19 50-68 40-58 (82)
287 3no3_A Glycerophosphodiester p 29.3 53 0.0018 27.6 4.2 50 53-122 186-235 (238)
288 3q9s_A DNA-binding response re 29.2 2E+02 0.007 23.5 8.0 75 162-239 74-154 (249)
289 3kht_A Response regulator; PSI 29.2 1.6E+02 0.0055 21.2 8.7 78 161-238 43-131 (144)
290 3fhl_A Putative oxidoreductase 29.1 68 0.0023 28.4 5.2 84 19-126 54-140 (362)
291 3mil_A Isoamyl acetate-hydroly 29.0 36 0.0012 27.3 3.1 56 15-70 56-120 (240)
292 1zzm_A Putative deoxyribonucle 28.9 67 0.0023 26.6 4.9 52 17-68 76-132 (259)
293 3lua_A Response regulator rece 28.9 1E+02 0.0036 22.1 5.5 70 168-239 49-127 (140)
294 3ca8_A Protein YDCF; two domai 28.9 1.4E+02 0.0048 25.8 7.0 48 204-253 101-152 (266)
295 3hdg_A Uncharacterized protein 28.7 1.6E+02 0.0054 20.9 7.0 64 164-228 46-115 (137)
296 1tqj_A Ribulose-phosphate 3-ep 28.5 73 0.0025 26.7 5.0 94 11-127 69-167 (230)
297 4g9p_A 4-hydroxy-3-methylbut-2 28.5 60 0.0021 30.3 4.7 62 6-70 81-144 (406)
298 3glc_A Aldolase LSRF; TIM barr 28.5 75 0.0026 28.1 5.2 63 53-126 216-279 (295)
299 2tps_A Protein (thiamin phosph 28.4 2.1E+02 0.0073 23.0 7.9 67 18-106 33-103 (227)
300 1moq_A Glucosamine 6-phosphate 28.4 37 0.0013 30.5 3.2 33 170-202 100-137 (368)
301 3e82_A Putative oxidoreductase 28.2 90 0.0031 27.7 5.9 84 19-126 56-142 (364)
302 3oqb_A Oxidoreductase; structu 28.1 1.3E+02 0.0043 26.7 6.8 83 20-126 73-158 (383)
303 1w8s_A FBP aldolase, fructose- 28.1 1.2E+02 0.0041 26.0 6.4 44 83-126 209-253 (263)
304 3ohs_X Trans-1,2-dihydrobenzen 28.0 92 0.0032 27.1 5.8 84 19-126 55-141 (334)
305 3g68_A Putative phosphosugar i 28.0 28 0.00096 31.3 2.4 33 170-203 83-120 (352)
306 3bo9_A Putative nitroalkan dio 27.9 1.1E+02 0.0039 26.9 6.4 58 21-105 94-152 (326)
307 3fj1_A Putative phosphosugar i 27.8 29 0.00099 31.1 2.4 33 170-203 92-129 (344)
308 4d9i_A Diaminopropionate ammon 27.8 1.8E+02 0.0062 26.2 7.9 123 53-202 125-262 (398)
309 2aml_A SIS domain protein; 469 27.7 35 0.0012 30.8 3.0 33 170-202 98-135 (373)
310 3fok_A Uncharacterized protein 27.7 2.1E+02 0.0073 25.5 8.1 141 89-234 133-293 (307)
311 3i65_A Dihydroorotate dehydrog 27.6 78 0.0027 29.5 5.4 38 63-108 268-307 (415)
312 3av0_A DNA double-strand break 27.5 89 0.003 28.0 5.7 38 29-69 61-101 (386)
313 3e18_A Oxidoreductase; dehydro 27.5 1E+02 0.0035 27.2 6.1 84 19-126 54-140 (359)
314 3vnd_A TSA, tryptophan synthas 27.5 74 0.0025 27.7 4.9 53 6-68 95-153 (267)
315 3fkj_A Putative phosphosugar i 27.4 23 0.00078 31.9 1.7 32 170-202 90-126 (347)
316 3trj_A Phosphoheptose isomeras 27.4 28 0.00096 28.5 2.1 34 169-203 114-152 (201)
317 2a3n_A Putative glucosamine-fr 27.4 33 0.0011 30.7 2.7 32 170-202 103-139 (355)
318 4hkt_A Inositol 2-dehydrogenas 27.4 1E+02 0.0035 26.7 6.0 83 20-126 53-138 (331)
319 4gqa_A NAD binding oxidoreduct 27.3 93 0.0032 28.0 5.8 84 19-126 85-171 (412)
320 2i2c_A Probable inorganic poly 27.3 37 0.0013 29.3 2.9 34 168-201 147-184 (272)
321 1y0e_A Putative N-acetylmannos 27.2 2.4E+02 0.0083 22.6 9.2 65 20-104 79-146 (223)
322 2w7t_A CTP synthetase, putativ 27.2 1.2E+02 0.004 26.1 6.2 43 22-70 61-103 (273)
323 1m3u_A 3-methyl-2-oxobutanoate 27.1 2.1E+02 0.0071 24.9 7.8 60 164-224 169-235 (264)
324 3hv2_A Response regulator/HD d 27.1 1.8E+02 0.0063 21.2 7.7 60 163-222 52-118 (153)
325 4h3v_A Oxidoreductase domain p 27.0 87 0.003 27.4 5.5 54 20-93 65-121 (390)
326 3inp_A D-ribulose-phosphate 3- 27.0 1E+02 0.0035 26.5 5.7 76 11-110 93-170 (246)
327 3bw2_A 2-nitropropane dioxygen 27.0 1.9E+02 0.0066 25.7 7.9 79 7-104 146-237 (369)
328 3hba_A Putative phosphosugar i 26.9 33 0.0011 30.6 2.6 33 170-203 91-128 (334)
329 3euw_A MYO-inositol dehydrogen 26.8 1.2E+02 0.0041 26.4 6.4 84 19-126 54-140 (344)
330 1f2d_A 1-aminocyclopropane-1-c 26.7 2.7E+02 0.0091 24.3 8.7 135 51-203 80-230 (341)
331 2v4x_A JSRV capsid, capsid pro 26.7 32 0.0011 27.4 2.2 67 49-122 16-82 (140)
332 3i23_A Oxidoreductase, GFO/IDH 26.7 78 0.0027 27.8 5.1 84 19-126 54-140 (349)
333 3nav_A Tryptophan synthase alp 26.6 1.2E+02 0.0041 26.4 6.2 65 18-103 113-179 (271)
334 1h5y_A HISF; histidine biosynt 26.6 1.5E+02 0.0052 24.0 6.7 191 22-241 39-249 (253)
335 3rmj_A 2-isopropylmalate synth 26.5 77 0.0026 28.9 5.1 88 32-126 106-198 (370)
336 2ajr_A Sugar kinase, PFKB fami 26.4 86 0.0029 27.2 5.3 41 23-68 141-181 (331)
337 3eb2_A Putative dihydrodipicol 26.4 1.2E+02 0.0039 26.6 6.1 100 17-128 25-130 (300)
338 3ezy_A Dehydrogenase; structur 26.3 1.2E+02 0.004 26.5 6.2 83 19-126 53-139 (344)
339 1vs1_A 3-deoxy-7-phosphoheptul 26.3 2.4E+02 0.0083 24.5 8.1 91 7-119 103-196 (276)
340 3gdo_A Uncharacterized oxidore 26.3 80 0.0027 27.9 5.1 84 19-126 54-140 (358)
341 3qz6_A HPCH/HPAI aldolase; str 26.1 1.2E+02 0.0042 26.0 6.1 58 29-104 38-95 (261)
342 1rpx_A Protein (ribulose-phosp 26.0 1.2E+02 0.0039 25.0 5.8 89 20-122 132-225 (230)
343 4pga_A Glutaminase-asparaginas 25.9 34 0.0012 31.0 2.5 49 22-76 238-288 (337)
344 3o63_A Probable thiamine-phosp 25.9 78 0.0027 27.0 4.7 70 19-106 46-121 (243)
345 3mt0_A Uncharacterized protein 25.9 2.9E+02 0.0097 23.0 10.2 74 157-239 77-168 (290)
346 3uug_A Multiple sugar-binding 25.9 54 0.0018 27.8 3.7 43 18-70 48-91 (330)
347 3cz5_A Two-component response 25.7 1.9E+02 0.0066 21.0 7.2 61 162-222 44-110 (153)
348 1o60_A 2-dehydro-3-deoxyphosph 25.6 1.7E+02 0.0058 25.7 7.0 76 28-122 108-189 (292)
349 4fo4_A Inosine 5'-monophosphat 25.6 2.4E+02 0.0082 25.5 8.2 65 17-104 108-177 (366)
350 1ub3_A Aldolase protein; schif 25.6 70 0.0024 27.0 4.3 69 46-123 103-172 (220)
351 3knz_A Putative sugar binding 25.5 30 0.001 31.4 2.1 34 168-202 96-134 (366)
352 2poc_A D-fructose-6- PH, isome 25.4 33 0.0011 30.9 2.4 31 171-202 99-134 (367)
353 1agx_A Glutaminase-asparaginas 25.4 36 0.0012 30.6 2.6 50 22-77 232-283 (331)
354 1o66_A 3-methyl-2-oxobutanoate 25.3 1E+02 0.0035 27.2 5.4 78 16-105 95-182 (275)
355 1tzj_A ACC deaminase, 1-aminoc 25.3 1.9E+02 0.0066 25.1 7.5 44 158-202 173-226 (338)
356 3nbm_A PTS system, lactose-spe 25.2 13 0.00044 28.1 -0.4 38 21-68 46-83 (108)
357 2d6f_A Glutamyl-tRNA(Gln) amid 25.1 47 0.0016 31.2 3.4 50 22-77 318-368 (435)
358 4dpp_A DHDPS 2, dihydrodipicol 25.1 1.6E+02 0.0054 26.8 6.9 98 17-124 80-181 (360)
359 3fs2_A 2-dehydro-3-deoxyphosph 25.0 1.6E+02 0.0053 26.3 6.7 77 7-105 113-190 (298)
360 1j5x_A Glucosamine-6-phosphate 25.0 30 0.001 30.9 2.0 31 171-202 102-137 (342)
361 2nzl_A Hydroxyacid oxidase 1; 24.9 1E+02 0.0036 28.2 5.7 84 6-105 252-337 (392)
362 3kto_A Response regulator rece 24.9 96 0.0033 22.3 4.6 46 183-229 71-117 (136)
363 3i0z_A Putative tagatose-6-pho 24.9 37 0.0012 31.1 2.6 40 169-208 109-156 (389)
364 3rc1_A Sugar 3-ketoreductase; 24.8 1E+02 0.0035 27.2 5.5 83 20-126 79-164 (350)
365 2zj3_A Glucosamine--fructose-6 24.8 35 0.0012 30.9 2.4 32 170-202 108-144 (375)
366 3o9z_A Lipopolysaccaride biosy 24.7 1.1E+02 0.0039 26.5 5.8 84 19-126 53-147 (312)
367 3cu5_A Two component transcrip 24.7 2E+02 0.0068 20.8 7.7 61 162-222 42-108 (141)
368 3c85_A Putative glutathione-re 24.7 85 0.0029 24.5 4.5 52 169-221 105-160 (183)
369 1thf_D HISF protein; thermophI 24.6 2.2E+02 0.0077 23.3 7.4 86 19-121 154-242 (253)
370 3kts_A Glycerol uptake operon 24.5 53 0.0018 27.4 3.3 66 17-106 114-181 (192)
371 4d9b_A D-cysteine desulfhydras 24.5 3.1E+02 0.01 24.0 8.7 48 153-200 64-114 (342)
372 3bw2_A 2-nitropropane dioxygen 24.4 1.2E+02 0.0041 27.1 5.9 57 23-105 116-173 (369)
373 2vws_A YFAU, 2-keto-3-deoxy su 24.3 1.1E+02 0.0037 26.3 5.4 77 7-104 20-97 (267)
374 2qkf_A 3-deoxy-D-manno-octulos 24.3 2E+02 0.0067 25.1 7.1 76 28-122 105-186 (280)
375 3q2i_A Dehydrogenase; rossmann 24.2 1.3E+02 0.0045 26.3 6.1 83 20-126 65-150 (354)
376 1gvf_A Tagatose-bisphosphate a 24.2 1.5E+02 0.005 26.2 6.3 85 155-241 28-129 (286)
377 3q94_A Fructose-bisphosphate a 24.1 69 0.0023 28.4 4.1 100 6-114 80-189 (288)
378 1jw9_B Molybdopterin biosynthe 23.9 1.8E+02 0.0062 24.4 6.7 40 20-69 113-152 (249)
379 2pln_A HP1043, response regula 23.8 2E+02 0.0068 20.4 7.0 64 164-228 57-123 (137)
380 2xio_A Putative deoxyribonucle 23.8 79 0.0027 27.2 4.5 51 18-68 89-145 (301)
381 3gl9_A Response regulator; bet 23.7 1.9E+02 0.0066 20.2 8.0 68 161-229 38-113 (122)
382 4hs4_A Chromate reductase; tri 23.7 64 0.0022 26.4 3.6 50 16-70 61-116 (199)
383 1tmy_A CHEY protein, TMY; chem 23.7 1.8E+02 0.0062 19.9 7.4 63 165-228 43-111 (120)
384 3oa2_A WBPB; oxidoreductase, s 23.7 1.3E+02 0.0045 26.2 6.0 74 29-126 74-148 (318)
385 2an1_A Putative kinase; struct 23.6 46 0.0016 28.7 2.9 33 168-200 174-210 (292)
386 1zfj_A Inosine monophosphate d 23.6 69 0.0024 29.8 4.3 64 29-105 296-366 (491)
387 1u0t_A Inorganic polyphosphate 23.5 30 0.001 30.4 1.7 35 168-202 186-224 (307)
388 1knx_A Probable HPR(Ser) kinas 23.3 29 0.00099 31.2 1.5 87 5-112 51-161 (312)
389 1gvf_A Tagatose-bisphosphate a 23.3 95 0.0032 27.4 4.9 101 9-113 77-184 (286)
390 1rqb_A Transcarboxylase 5S sub 23.2 5E+02 0.017 24.9 10.4 110 50-180 144-255 (539)
391 1vr6_A Phospho-2-dehydro-3-deo 23.2 2.5E+02 0.0087 25.4 7.9 75 7-103 171-246 (350)
392 3kcn_A Adenylate cyclase homol 23.1 2.2E+02 0.0075 20.7 7.9 59 164-222 42-108 (151)
393 3n0r_A Response regulator; sig 23.0 2.4E+02 0.0082 24.0 7.5 68 160-230 196-269 (286)
394 1yt5_A Inorganic polyphosphate 23.0 30 0.001 29.7 1.5 35 168-202 146-184 (258)
395 2jg1_A Tagatose-6-phosphate ki 22.9 78 0.0027 27.5 4.3 62 23-104 142-205 (330)
396 3oa3_A Aldolase; structural ge 22.9 3.9E+02 0.013 23.5 11.3 145 38-197 63-239 (288)
397 2him_A L-asparaginase 1; hydro 22.9 55 0.0019 29.8 3.4 50 22-77 246-298 (358)
398 1twd_A Copper homeostasis prot 22.8 2.1E+02 0.0073 24.8 7.0 131 60-219 48-197 (256)
399 1f76_A Dihydroorotate dehydrog 22.8 1.6E+02 0.0054 25.8 6.3 51 49-107 187-248 (336)
400 3f6p_A Transcriptional regulat 22.7 2E+02 0.0068 20.0 7.8 66 161-228 38-109 (120)
401 2uva_G Fatty acid synthase bet 22.7 1.2E+02 0.0041 34.1 6.5 86 7-104 693-795 (2060)
402 3gx1_A LIN1832 protein; APC633 22.7 2.5E+02 0.0087 21.3 7.4 39 212-253 31-69 (130)
403 2y1h_A Putative deoxyribonucle 22.6 90 0.0031 26.1 4.5 52 17-68 84-144 (272)
404 3pm6_A Putative fructose-bisph 22.5 51 0.0017 29.6 2.9 81 29-113 114-200 (306)
405 2qjg_A Putative aldolase MJ040 22.5 1.6E+02 0.0056 24.7 6.2 60 59-126 198-259 (273)
406 1uj6_A Ribose 5-phosphate isom 22.5 31 0.001 29.4 1.4 39 174-213 25-70 (227)
407 1dbw_A Transcriptional regulat 22.4 2E+02 0.0069 20.0 8.5 73 163-237 41-119 (126)
408 4gm6_A PFKB family carbohydrat 22.4 54 0.0018 28.7 3.1 72 22-104 144-218 (351)
409 3db2_A Putative NADPH-dependen 22.4 2E+02 0.0067 25.1 6.9 83 20-126 56-141 (354)
410 1zq1_A Glutamyl-tRNA(Gln) amid 22.3 47 0.0016 31.2 2.8 50 22-77 321-371 (438)
411 2i2w_A Phosphoheptose isomeras 22.3 33 0.0011 28.1 1.6 33 169-202 131-168 (212)
412 3n53_A Response regulator rece 22.2 2.2E+02 0.0074 20.3 8.9 65 163-228 40-112 (140)
413 3vav_A 3-methyl-2-oxobutanoate 22.2 2.7E+02 0.0091 24.4 7.5 87 5-103 89-192 (275)
414 3ec7_A Putative dehydrogenase; 22.1 1.5E+02 0.005 26.2 6.0 84 19-126 76-163 (357)
415 1zh8_A Oxidoreductase; TM0312, 22.1 1.7E+02 0.0058 25.5 6.4 84 19-126 71-157 (340)
416 1ujp_A Tryptophan synthase alp 22.1 86 0.0029 27.2 4.3 79 17-104 31-126 (271)
417 3r2g_A Inosine 5'-monophosphat 22.0 2.2E+02 0.0075 25.9 7.2 69 15-106 98-171 (361)
418 3daq_A DHDPS, dihydrodipicolin 22.0 1.5E+02 0.005 25.8 5.9 62 4-69 69-134 (292)
419 1ka9_F Imidazole glycerol phos 21.9 1.8E+02 0.0062 23.9 6.3 194 22-241 37-247 (252)
420 3tbf_A Glucosamine--fructose-6 21.9 38 0.0013 30.7 2.0 33 170-202 102-139 (372)
421 3ajx_A 3-hexulose-6-phosphate 21.9 2.3E+02 0.0079 22.5 6.8 77 29-122 128-204 (207)
422 2f02_A Tagatose-6-phosphate ki 21.6 1.4E+02 0.0048 25.6 5.7 42 22-68 123-164 (323)
423 8abp_A L-arabinose-binding pro 21.5 85 0.0029 26.1 4.1 43 18-70 46-89 (306)
424 2vtf_A Endo-beta-N-acetylgluco 21.5 2.6E+02 0.0088 27.4 8.0 73 54-129 113-199 (626)
425 1em9_A GAG polyprotein capsid 21.4 48 0.0016 26.8 2.3 57 49-106 16-72 (154)
426 1lc0_A Biliverdin reductase A; 21.4 1.4E+02 0.0049 25.5 5.7 81 20-125 55-139 (294)
427 3l7n_A Putative uncharacterize 21.4 67 0.0023 26.8 3.4 42 28-69 45-90 (236)
428 3cnb_A DNA-binding response re 21.4 2.2E+02 0.0076 20.1 9.3 76 162-239 47-130 (143)
429 2ho3_A Oxidoreductase, GFO/IDH 21.3 1.9E+02 0.0065 24.8 6.5 84 19-126 52-137 (325)
430 3hdv_A Response regulator; PSI 21.3 2.2E+02 0.0076 20.0 7.2 67 170-238 53-126 (136)
431 1rvg_A Fructose-1,6-bisphospha 21.3 2.1E+02 0.0071 25.5 6.7 84 155-241 27-127 (305)
432 3vnd_A TSA, tryptophan synthas 21.3 1.5E+02 0.005 25.7 5.7 73 19-104 161-235 (267)
433 2oqr_A Sensory transduction pr 21.2 2.3E+02 0.0077 22.4 6.6 74 164-240 43-122 (230)
434 3nkl_A UDP-D-quinovosamine 4-d 21.2 2.3E+02 0.0079 20.7 6.3 42 19-68 54-97 (141)
435 3tqv_A Nicotinate-nucleotide p 21.1 1.8E+02 0.0061 25.7 6.2 56 29-105 169-226 (287)
436 3mm4_A Histidine kinase homolo 21.0 2.2E+02 0.0077 22.4 6.5 63 169-231 119-192 (206)
437 3ih1_A Methylisocitrate lyase; 21.0 1.9E+02 0.0064 25.7 6.4 79 5-104 158-243 (305)
438 2p2s_A Putative oxidoreductase 21.0 2E+02 0.0067 24.9 6.5 58 19-96 55-115 (336)
439 3cvj_A Putative phosphoheptose 20.9 36 0.0012 28.5 1.5 34 169-203 108-146 (243)
440 3h8v_A Ubiquitin-like modifier 20.8 2E+02 0.0067 25.3 6.5 56 4-69 102-168 (292)
441 3tho_B Exonuclease, putative; 20.8 1.2E+02 0.0041 27.2 5.2 51 16-68 29-83 (379)
442 3rot_A ABC sugar transporter, 20.8 1.5E+02 0.0053 24.5 5.7 43 19-71 51-94 (297)
443 1p4c_A L(+)-mandelate dehydrog 20.7 1.7E+02 0.0058 26.5 6.2 82 7-107 226-310 (380)
444 3bq9_A Predicted rossmann fold 20.7 1.7E+02 0.0059 27.7 6.3 96 18-132 235-338 (460)
445 4gmf_A Yersiniabactin biosynth 20.5 66 0.0023 29.2 3.4 59 20-95 58-116 (372)
446 1jub_A Dihydroorotate dehydrog 20.5 1.2E+02 0.004 26.3 4.9 49 49-105 143-193 (311)
447 2qsj_A DNA-binding response re 20.4 2.1E+02 0.0071 20.8 5.8 75 164-240 44-125 (154)
448 2zsj_A Threonine synthase; PLP 20.3 3.8E+02 0.013 23.5 8.4 9 245-253 181-189 (352)
449 3q58_A N-acetylmannosamine-6-p 20.2 90 0.0031 26.3 4.0 46 62-122 180-225 (229)
450 3mz2_A Glycerophosphoryl diest 20.2 1.3E+02 0.0045 26.1 5.2 57 50-121 215-276 (292)
451 2qxy_A Response regulator; reg 20.1 2.4E+02 0.0083 20.0 7.9 76 161-238 40-120 (142)
452 3snk_A Response regulator CHEY 20.0 99 0.0034 22.1 3.8 60 168-228 58-123 (135)
No 1
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=1.2e-84 Score=631.99 Aligned_cols=257 Identities=34% Similarity=0.516 Sum_probs=237.9
Q ss_pred CcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCCh
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTR 84 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptr 84 (264)
.++.||||||+++|++|||||++++|||||||||||+|+|.++||.+||+||++|+++|||||+||||||||+.||+|||
T Consensus 263 ~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTR 342 (526)
T 4drs_A 263 SSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTR 342 (526)
T ss_dssp CCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCH
T ss_pred ccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHHH
Q 024709 85 AEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAKI 164 (264)
Q Consensus 85 ae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~l 164 (264)
||++||||||+||+||||||+|||.|+||+|||++|++||+++|+...+...+..... ..+.+.+..+++|.+|+++
T Consensus 343 AEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~---~~~~~~~~~~aia~aa~~~ 419 (526)
T 4drs_A 343 AEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHS---SVPKPVAVPEAIACSAVES 419 (526)
T ss_dssp HHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH---HSCSSCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhh---ccCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999986544332221110 0122456889999999999
Q ss_pred HHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCCC
Q 024709 165 ANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESNLNQTFSLLKARGLIKS 244 (264)
Q Consensus 165 A~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~~g~~~~ 244 (264)
|++++|++||+||+||+||+++|||||.+||||+|++++++|||+|+|||+|+++++..+.+++++.++++++++|++++
T Consensus 420 A~~l~a~aIv~~T~sG~tA~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~~~~~d~~i~~a~~~~~~~g~~~~ 499 (526)
T 4drs_A 420 AHDVNAKLIITITETGNTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSIHHSEVVISNALALAKEESLIES 499 (526)
T ss_dssp HHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCCCCHHHHHHHHHHHHHHTTSCCT
T ss_pred HHhCCCCEEEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEec-------CCceEEEEECC
Q 024709 245 GDLIIVVSD-------MLQCIQVINVP 264 (264)
Q Consensus 245 GD~VVvvsG-------~~~~i~v~~v~ 264 (264)
||.||+++| +||++||++||
T Consensus 500 GD~vVi~~G~p~g~~G~TN~lrv~~VP 526 (526)
T 4drs_A 500 GDFAIAVHGVKESCPGSCNLMKIVRCP 526 (526)
T ss_dssp TCEEEEEC----------CCEEEEECC
T ss_pred cCEEEEEeccCCCCCCcceEEEEEECC
Confidence 999999998 49999999999
No 2
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.2e-82 Score=613.69 Aligned_cols=258 Identities=30% Similarity=0.490 Sum_probs=238.1
Q ss_pred CCCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCC
Q 024709 3 SLVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIP 82 (264)
Q Consensus 3 ~~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~p 82 (264)
.+.++.|||||||++|++|+|||++++|||||||||||+|+|.++||.+||+||++||++|||||+||||||||+.+|+|
T Consensus 255 ~g~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~P 334 (520)
T 3khd_A 255 RGRHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRP 334 (520)
T ss_dssp TTTTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSC
T ss_pred cCCCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCc
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHH
Q 024709 83 TRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAA 162 (264)
Q Consensus 83 trae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv 162 (264)
||||++||+|||+||+||+|||+|||.|+||+|||++|++||+++|+...+...+...... .+.+.+..+++|.+++
T Consensus 335 TRAEvsDVanAVldGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~---~~~~~~~~~aia~aa~ 411 (520)
T 3khd_A 335 TRAEVTDVANAVLDGTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNA---IETPISVQEAVARSAV 411 (520)
T ss_dssp CHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH---SCSCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhc---cCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999865432211110000 1123467899999999
Q ss_pred HHHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHHHHHHHHHHHHcCCC
Q 024709 163 KIANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESNLNQTFSLLKARGLI 242 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~~g~~ 242 (264)
++|++++|++||+||+||+||+++|||||.+||||+|++++++|||+|+|||+|++++...+.+++++.++++++++|++
T Consensus 412 ~~A~~l~a~aIv~~T~SG~TA~~vSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~ 491 (520)
T 3khd_A 412 ETAESIQASLIIALTETGYTARLIAKYKPSCTILALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMA 491 (520)
T ss_dssp HHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTSS
T ss_pred HHHHhcCCCEEEEECCCcHHHHHHHhcCCCCCEEEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred CCCCEEEEEec-------CCceEEEEEC
Q 024709 243 KSGDLIIVVSD-------MLQCIQVINV 263 (264)
Q Consensus 243 ~~GD~VVvvsG-------~~~~i~v~~v 263 (264)
++||.||+++| +||++||++|
T Consensus 492 ~~GD~vVv~~G~~~g~~G~TN~lrv~~v 519 (520)
T 3khd_A 492 KVGDSVIAIHGIKEEVSGGTNLMKVVQI 519 (520)
T ss_dssp CTTCEEEEEEC-CCSSTTCEEEEEEEEC
T ss_pred CCcCEEEEEeCccCCCCCCCeEEEEEEe
Confidence 99999999988 4999999986
No 3
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=8.6e-82 Score=612.89 Aligned_cols=259 Identities=35% Similarity=0.538 Sum_probs=237.5
Q ss_pred CCCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCC
Q 024709 3 SLVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIP 82 (264)
Q Consensus 3 ~~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~p 82 (264)
.+.++.|||||||++|++|+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||||||||+.+|+|
T Consensus 280 ~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~P 359 (550)
T 3gr4_A 280 KGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRP 359 (550)
T ss_dssp TTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSC
T ss_pred cCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCc
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHH
Q 024709 83 TRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAA 162 (264)
Q Consensus 83 trae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv 162 (264)
||||++||+|||+||+||+|||+|||.|+||+|||++|++||+++|+...+...+.... .. .+.+.+..+++|.+|+
T Consensus 360 TRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~--~~-~~~~~~~~~aia~aa~ 436 (550)
T 3gr4_A 360 TRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELR--RL-APITSDPTEATAVGAV 436 (550)
T ss_dssp CHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHH--HH-SCCCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhh--hc-cCCCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998644322221110 00 1124467899999999
Q ss_pred HHHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCC------CCHHHHHHHHHHHH
Q 024709 163 KIANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFS------DDMESNLNQTFSLL 236 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~------~~~e~~i~~al~~~ 236 (264)
++|++++|++||+||+||+||+++|||||.+||||+|++++++|||+|+|||+|++++.. .+.+++++.+++++
T Consensus 437 ~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a~~~~ 516 (550)
T 3gr4_A 437 EASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVG 516 (550)
T ss_dssp HHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecccccccccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998754 46788999999999
Q ss_pred HHcCCCCCCCEEEEEec------CCceEEEEECC
Q 024709 237 KARGLIKSGDLIIVVSD------MLQCIQVINVP 264 (264)
Q Consensus 237 ~~~g~~~~GD~VVvvsG------~~~~i~v~~v~ 264 (264)
+++|++++||.||+++| +||++||++||
T Consensus 517 ~~~g~~~~GD~vVv~~G~~~g~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 517 KARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 550 (550)
T ss_dssp HHTTSCCTTCEEEEEEESSSSTTCEEEEEEEECC
T ss_pred HHcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 99999999999999998 49999999997
No 4
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=7.4e-82 Score=609.54 Aligned_cols=258 Identities=31% Similarity=0.482 Sum_probs=236.9
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT 83 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt 83 (264)
+.++.|||||||++|++|+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||||||||+.||+||
T Consensus 247 ~~~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PT 326 (511)
T 3gg8_A 247 GRHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPT 326 (511)
T ss_dssp GTTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCC
T ss_pred CCCCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCcc
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHH
Q 024709 84 RAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAK 163 (264)
Q Consensus 84 rae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~ 163 (264)
|||++||+|||+||+||+|||+|||.|+||+|||++|++||.++|+...+...|+... . ....+.+..+++|.++++
T Consensus 327 RAEvsDVAnAV~dGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~-~--~~~~~~~~~~aia~aa~~ 403 (511)
T 3gg8_A 327 RAEAADVANAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMC-L--AVPPPISTQEAVARAAVE 403 (511)
T ss_dssp HHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHH-H--HSCSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhh-h--cccCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998643322121100 0 011234678999999999
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCC
Q 024709 164 IANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESNLNQTFSLLKARGLIK 243 (264)
Q Consensus 164 lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~~g~~~ 243 (264)
+|++++|++||+||.||+||+++|||||.+||||+|++++++|||+|+|||+|++++...+.++++..++++++++|+++
T Consensus 404 ~A~~l~a~aIv~~T~SG~tA~~iSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~ 483 (511)
T 3gg8_A 404 TAECVNAAIILALTETGQTARLIAKYRPMQPILALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVT 483 (511)
T ss_dssp HHHHHTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHHHHHHTTSCC
T ss_pred HHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred CCCEEEEEec-------CCceEEEEECC
Q 024709 244 SGDLIIVVSD-------MLQCIQVINVP 264 (264)
Q Consensus 244 ~GD~VVvvsG-------~~~~i~v~~v~ 264 (264)
+||.||+++| +||++||++||
T Consensus 484 ~GD~vVi~~G~~~g~~G~TN~lrv~~v~ 511 (511)
T 3gg8_A 484 EGESIVAVHGMKEEVAGSSNLLKVLTVE 511 (511)
T ss_dssp TTCEEEEEEEC------CCEEEEEEECC
T ss_pred CcCEEEEEeCccCCCCCCCeEEEEEEcC
Confidence 9999999998 49999999987
No 5
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=6.7e-82 Score=608.95 Aligned_cols=258 Identities=32% Similarity=0.529 Sum_probs=236.2
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT 83 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt 83 (264)
+.++.|||||||++|++|+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||||||||+.+|+||
T Consensus 231 ~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PT 310 (499)
T 3hqn_D 231 GRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPT 310 (499)
T ss_dssp GTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCC
T ss_pred CCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCcc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHH
Q 024709 84 RAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAK 163 (264)
Q Consensus 84 rae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~ 163 (264)
|||++||+|||+||+||+|||+|||.|+||+|||++|++||+++|+...+...|...... .+.+.+..+++|.+|++
T Consensus 311 RAEvsDVanaV~dG~DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~---~~~~~~~~~aia~aa~~ 387 (499)
T 3hqn_D 311 RAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKL---QHIPMSADEAVCSSAVN 387 (499)
T ss_dssp HHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHT---CCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhc---cCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999865433222111000 11234678999999999
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCC-----CCHHHHHHHHHHHHHH
Q 024709 164 IANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFS-----DDMESNLNQTFSLLKA 238 (264)
Q Consensus 164 lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~-----~~~e~~i~~al~~~~~ 238 (264)
+|++++|++||+||+||+||+++|||||.+||||+|++++++|||+|+|||+|++++.. .+.+++++.+++++++
T Consensus 388 ~A~~l~a~aIv~~T~SG~tA~~isr~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~d~~~~~a~~~~~~ 467 (499)
T 3hqn_D 388 SVYETKAKAMVVLSNTGRSARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKEHRVAAGVEFAKS 467 (499)
T ss_dssp HHHHHTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeccccccccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998753 3788999999999999
Q ss_pred cCCCCCCCEEEEEec------CCceEEEEECC
Q 024709 239 RGLIKSGDLIIVVSD------MLQCIQVINVP 264 (264)
Q Consensus 239 ~g~~~~GD~VVvvsG------~~~~i~v~~v~ 264 (264)
+|++++||.||+++| +||++||++|.
T Consensus 468 ~g~~~~GD~vVv~~G~~~~~G~TN~~rv~~v~ 499 (499)
T 3hqn_D 468 KGYVQTGDYCVVIHADHKVKGYANQTRILLVE 499 (499)
T ss_dssp TTSCCTTCEEEEEEECC-----CEEEEEEECC
T ss_pred cCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 999999999999998 49999999874
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=7.5e-81 Score=613.65 Aligned_cols=256 Identities=33% Similarity=0.535 Sum_probs=238.2
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT 83 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt 83 (264)
+.++.|||||||++|++|+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||||||||++||+||
T Consensus 232 ~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PT 311 (606)
T 3t05_A 232 KANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRAT 311 (606)
T ss_dssp TCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCC
T ss_pred CCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCcc
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHH
Q 024709 84 RAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAK 163 (264)
Q Consensus 84 rae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~ 163 (264)
|||++||+|||+||+||+|||+|||.|+||+|||++|++||+++|+..++...+.... ...+.+..+++|.++++
T Consensus 312 RAEvsDVanAv~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~-----~~~~~~~~~aia~aa~~ 386 (606)
T 3t05_A 312 RAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRT-----KLVETSLVNAIGISVAH 386 (606)
T ss_dssp HHHHHHHHHHHHHTCSEEEECHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHH-----HHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhc-----cccCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998654322211100 01134678999999999
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCC
Q 024709 164 IANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESNLNQTFSLLKARGLIK 243 (264)
Q Consensus 164 lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~~g~~~ 243 (264)
+|++++|++||+||+||+||+++|||||.+||||+|++++++|||+|+|||+|++++...+.+++++.++++++++|+++
T Consensus 387 ~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pIia~t~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~ 466 (606)
T 3t05_A 387 TALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVT 466 (606)
T ss_dssp HHHHHTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHHHTSSSEEEEECCCCSSHHHHHHHHHHHHHHTTSCC
T ss_pred HHHhcCCCEEEEEcCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred CCCEEEEEec-------CCceEEEEECC
Q 024709 244 SGDLIIVVSD-------MLQCIQVINVP 264 (264)
Q Consensus 244 ~GD~VVvvsG-------~~~~i~v~~v~ 264 (264)
+||.||+++| +||++||++|+
T Consensus 467 ~GD~vVi~~G~p~g~~g~tN~~~v~~v~ 494 (606)
T 3t05_A 467 NGDLIIITAGVPTGETGTTNMMKIHLVG 494 (606)
T ss_dssp TTCEEEEEECSSTTTCSSCCEEEEEECC
T ss_pred CCCEEEEEeCccCCCCCCccceEEEEec
Confidence 9999999987 49999999874
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=2.5e-80 Score=595.73 Aligned_cols=253 Identities=33% Similarity=0.497 Sum_probs=219.3
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT 83 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt 83 (264)
+.++.||+||||++|++|+|||++++|||||||||||+|+|.++|+.+||+|+++|+++|||||+||||||||+.||+||
T Consensus 212 ~~~i~IiakIEt~eav~nldeI~~~sDgImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PT 291 (470)
T 1e0t_A 212 GENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPT 291 (470)
T ss_dssp CTTCEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCC
T ss_pred CCCceEEEEECCHHHHHhHHHHHHHCCEEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCcc
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHH
Q 024709 84 RAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAK 163 (264)
Q Consensus 84 rae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~ 163 (264)
|||++||+|||+||+||+|||+|||.|+||+|||++|++||.++|+.+++...+. .... ..+..+++|.++++
T Consensus 292 RAEvsDVanAV~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~-----~~~~--~~~~~~aia~aa~~ 364 (470)
T 1e0t_A 292 DAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFN-----NDNR--KLRITEAVCRGAVE 364 (470)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCC------CHHHHHHHHHHHHHHHTTCCCCCC----------------CHHHHHHHHHH
T ss_pred HHHHhhhhHhhhcCccEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhhHHHh-----hhcc--ccchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998543221111 1111 23567999999999
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCC
Q 024709 164 IANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESNLNQTFSLLKARGLIK 243 (264)
Q Consensus 164 lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~~g~~~ 243 (264)
+|++++|++||+||+||+||+++|||||.+||||+|++++++|||+|+|||+|+++++..+.+++++.++++++++|+++
T Consensus 365 ~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~ 444 (470)
T 1e0t_A 365 TAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAH 444 (470)
T ss_dssp HHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEEEEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHTSSSC
T ss_pred HHHhcCCCEEEEECCChhHHHHHHhhCCCCCEEEECCCHHHHHHhhhhccceEEEecCCCCHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred CCCEEEEEec------CCceEEEEEC
Q 024709 244 SGDLIIVVSD------MLQCIQVINV 263 (264)
Q Consensus 244 ~GD~VVvvsG------~~~~i~v~~v 263 (264)
+||.||+++| +||+++|++|
T Consensus 445 ~GD~vvv~~g~~~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 445 KGDVVVMVSGALVPSGTTNTASVHVL 470 (470)
T ss_dssp TTCEEEEEECSSSCTTCCCEEEEEEC
T ss_pred CcCEEEEEeCCCCCCCccceEEEEEC
Confidence 9999999986 5999999875
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=1.1e-78 Score=598.88 Aligned_cols=254 Identities=34% Similarity=0.551 Sum_probs=235.0
Q ss_pred CcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCCh
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTR 84 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptr 84 (264)
+++.||+|||+++|++|+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||||||||+.||+|||
T Consensus 214 ~~~~iiakIE~~eav~nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTR 293 (587)
T 2e28_A 214 LHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTR 293 (587)
T ss_dssp TTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCH
T ss_pred CCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHHH
Q 024709 85 AEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAKI 164 (264)
Q Consensus 85 ae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~l 164 (264)
||++||+|||+||+||+|||+|||.|+||+|||++|++||.++|+.+++...+.... . ..+.+..+++|.+++++
T Consensus 294 AE~sDvanav~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~-~----~~~~~~~~aia~aa~~~ 368 (587)
T 2e28_A 294 AEASDVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRT-K----ESQTTITDAIGQSVAHT 368 (587)
T ss_dssp HHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHH-T----TCCCCHHHHHHHHHHHH
T ss_pred HHHhccchhhhhCcceeeecccccCCCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhh-c----ccccchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998543211111000 0 11235689999999999
Q ss_pred HHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCCC
Q 024709 165 ANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESNLNQTFSLLKARGLIKS 244 (264)
Q Consensus 165 A~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~~g~~~~ 244 (264)
|++++|++||+||+||+||+++|||||.+||||+|++++++|||+|+|||+|+++++..+.+++++.+++++++.|++++
T Consensus 369 a~~~~a~aIv~~T~sG~ta~~isr~Rp~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~G~~k~ 448 (587)
T 2e28_A 369 ALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKH 448 (587)
T ss_dssp HHHTTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESSHHHHHHGGGSTTEEEEECCCCCSHHHHHHHHHHHHHHHTCCCT
T ss_pred HHhCCCCEEEEECCCcHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCceEEeccccCCHHHHHHHHHHHHHhCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred CCEEEEEec-------CCceEEEEEC
Q 024709 245 GDLIIVVSD-------MLQCIQVINV 263 (264)
Q Consensus 245 GD~VVvvsG-------~~~~i~v~~v 263 (264)
||.|++++| .||++++..+
T Consensus 449 GD~VVItqG~P~g~~G~TN~LkI~~V 474 (587)
T 2e28_A 449 GDLVVITAGVPVGETGSTNLMKVHVI 474 (587)
T ss_dssp TCEEEEEECSSCSSCCCCCEEEEEEC
T ss_pred cceEEEecCcccCcCCCCceEEEEEE
Confidence 999999998 4899998765
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.3e-77 Score=573.37 Aligned_cols=236 Identities=30% Similarity=0.486 Sum_probs=223.4
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT 83 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt 83 (264)
+.++.|||||||++|++|+|||++++|||||||||||+|+|.++|+.+||+|+++|+++|||||+||||||||+.+|+||
T Consensus 222 g~~~~iiaKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PT 301 (461)
T 3qtg_A 222 GFQSQVAVKIETKGAVNNLEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPT 301 (461)
T ss_dssp TCCCEEEEEECSHHHHHTHHHHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCC
T ss_pred CCCceEEEEECCHHHHHhHHHHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCcc
Confidence 45699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHH
Q 024709 84 RAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAK 163 (264)
Q Consensus 84 rae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~ 163 (264)
|||++||+|||+||+||+|||+|||.|+||+|||++|++||+++|+...+ + +.+.+..+++|.++++
T Consensus 302 RAEvsDVanAV~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~------~-------~~~~~~~~aia~aa~~ 368 (461)
T 3qtg_A 302 RAEINDVFTTASMGVDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQ------S-------PLLQNSRDRFAKGLVE 368 (461)
T ss_dssp HHHHHHHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHHTCCCCCCC------C-------CCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEcccccCCCCHHHHHHHHHHHHHHHHhhhhh------c-------cCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999975321 0 1244678999999999
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHHHHHHHHHHHHcCCCC
Q 024709 164 IANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESNLNQTFSLLKARGLIK 243 (264)
Q Consensus 164 lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~~g~~~ 243 (264)
+|++++|+ ||+||+||+||+++|||||.+||||+|++++++|||+|+|||+|++++ ..+.|++++.++++++++|
T Consensus 369 ~a~~~~a~-Iv~~T~SG~tA~~vsr~RP~~pIia~T~~~~~~r~l~l~~GV~p~~~~-~~~~d~~~~~a~~~~~~~g--- 443 (461)
T 3qtg_A 369 LAQDLGAN-ILVFSMSGTLARRIAKFRPRGVVYVGTPNVRVARSLSIVWALEPLYIP-AENYEEGLEKLISLKGTTP--- 443 (461)
T ss_dssp HHHHHTCE-EEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHHTTSTTEEEEECC-CSSHHHHHHHHHHHHCCSS---
T ss_pred HHHhcCCC-EEEECCCcHHHHHHHhhCCCCCEEEeCCCHHHHhhceeccceEEEEeC-CCCHHHHHHHHHHHHHHCC---
Confidence 99999999 999999999999999999999999999999999999999999999998 7889999999999999987
Q ss_pred CCCEEEEEec---CCceEEEE
Q 024709 244 SGDLIIVVSD---MLQCIQVI 261 (264)
Q Consensus 244 ~GD~VVvvsG---~~~~i~v~ 261 (264)
||+++| +||+++|+
T Consensus 444 ----vvit~g~p~~TN~~~v~ 460 (461)
T 3qtg_A 444 ----FVATYGIRGGVHSVKVK 460 (461)
T ss_dssp ----EEEEECCTTSCCEEEEE
T ss_pred ----EEEEeccCCCCeEEEEE
Confidence 888888 59999986
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=7.8e-75 Score=561.61 Aligned_cols=257 Identities=32% Similarity=0.502 Sum_probs=234.9
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT 83 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt 83 (264)
+.++.||+||||++|++|+|||++++|||||||||||+|+|.++|+.+||+|+.+|+++|||+|+||||||||+.+|+||
T Consensus 232 ~~~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~pt 311 (500)
T 1a3w_A 232 GKDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPT 311 (500)
T ss_dssp HTTSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCC
T ss_pred CCCcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCch
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHH
Q 024709 84 RAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAK 163 (264)
Q Consensus 84 rae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~ 163 (264)
|||++|++|++.+|+|++|||+||+.|+||+|||++|++||.++|+.+++...+.... .. .+.+.+..+++|.++++
T Consensus 312 raEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~--~~-~~~~~~~~~aia~aa~~ 388 (500)
T 1a3w_A 312 RAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMR--NC-TPKPTSTTETVAASAVA 388 (500)
T ss_dssp HHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHT--TS-CCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhh--hc-cccccchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998543221111111 00 01123568999999999
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecC------CCCHHHHHHHHHHHHH
Q 024709 164 IANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNF------SDDMESNLNQTFSLLK 237 (264)
Q Consensus 164 lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~------~~~~e~~i~~al~~~~ 237 (264)
+|++++|++||+||+||+||+++|||||.+||||+|++++++|||+|+|||+|++++. ..+.+++++.++++++
T Consensus 389 ~a~~~~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~ 468 (500)
T 1a3w_A 389 AVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAK 468 (500)
T ss_dssp HHHHHTCSCEEEECSSSHHHHHHHHTCCSSCEEEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999875 5678999999999999
Q ss_pred HcCCCCCCCEEEEEec------CCceEEEEEC
Q 024709 238 ARGLIKSGDLIIVVSD------MLQCIQVINV 263 (264)
Q Consensus 238 ~~g~~~~GD~VVvvsG------~~~~i~v~~v 263 (264)
++|++++||.||+++| +||+++|++|
T Consensus 469 ~~g~~~~GD~vvv~~g~~~~~g~tn~~~v~~v 500 (500)
T 1a3w_A 469 EFGILKKGDTYVSIQGFKAGAGHSNTLQVSTV 500 (500)
T ss_dssp HTTCSCTTCEEEEEECCCTTTCCCCEEEEEEC
T ss_pred HCCCCCCcCEEEEEecccCCCCCCceEEEEEC
Confidence 9999999999999986 5999999875
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.55 E-value=7.1e-16 Score=143.22 Aligned_cols=112 Identities=17% Similarity=0.171 Sum_probs=98.0
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhh--cceeeecCCCcccC--------CCC---CChHHHHHHHHHHHHHhCCCEEEEh
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILA--SDGAMVARGDLGAQ--------VPL---EQVPSIQEKIVQLCRQLNKPVIVAS 70 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~--~Dgi~i~rgdL~~~--------~~~---~~v~~~qk~ii~~~~~~gkpv~~at 70 (264)
|.++.|++||||++|++|+|+|+++ +|++|||++||+.+ +|. ++|..++++++.+|+++|||++..+
T Consensus 175 ~~~i~vi~mIEt~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~ 254 (339)
T 1izc_A 175 NNHVCIIPQIESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA 254 (339)
T ss_dssp HHHCEEEEEECSHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcCceEEEEEChHHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec
Confidence 4568999999999999999999986 99999999999999 876 7899999999999999999998643
Q ss_pred hhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccC--CCChHHHHHHHHHHHHHHHhh
Q 024709 71 QLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAM--GQFPDKALAVLRSVSLRIEKW 130 (264)
Q Consensus 71 q~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~--G~yP~eav~~m~~i~~~~E~~ 130 (264)
..| .++.+++.+|+|+++++.++.. +.| .+.|+++++|+.++|+.
T Consensus 255 ---------~d~-----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~ 301 (339)
T 1izc_A 255 ---------LSV-----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQ 301 (339)
T ss_dssp ---------SSG-----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC-
T ss_pred ---------CCH-----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 344 4668999999999999998876 667 78999999998887764
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.44 E-value=2e-15 Score=135.70 Aligned_cols=88 Identities=22% Similarity=0.305 Sum_probs=74.8
Q ss_pred CcceEEEeccCHHHHhcHHHHHhh--cceeeecCCCcccCCCC------CChHHHHHHHHHHHHHhCCCEEEEhhhhhhh
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILA--SDGAMVARGDLGAQVPL------EQVPSIQEKIVQLCRQLNKPVIVASQLLESM 76 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~------~~v~~~qk~ii~~~~~~gkpv~~atq~leSM 76 (264)
+++.+++||||++|++|+|||+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+
T Consensus 144 ~~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~------ 217 (267)
T 2vws_A 144 DSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA------ 217 (267)
T ss_dssp HHCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC------
T ss_pred cccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec------
Confidence 458999999999999999999998 99999999999999986 5688999999999999999998732
Q ss_pred hhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 77 IEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 77 ~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
..|. +...++.+|++.+..+.+
T Consensus 218 ---~d~~-----~a~~~~~~G~~~~s~~~d 239 (267)
T 2vws_A 218 ---VAPD-----MAQQCLAWGANFVAVGVD 239 (267)
T ss_dssp ---SSHH-----HHHHHHHTTCCEEEEEEH
T ss_pred ---CCHH-----HHHHHHHCCCCEEEEchH
Confidence 2332 335677888888877755
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.39 E-value=5.5e-14 Score=127.74 Aligned_cols=89 Identities=20% Similarity=0.250 Sum_probs=74.6
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhh--cceeeecCCCcccCCCC------CChHHHHHHHHHHHHHhCCCEEEEhhhhhh
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILA--SDGAMVARGDLGAQVPL------EQVPSIQEKIVQLCRQLNKPVIVASQLLES 75 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~------~~v~~~qk~ii~~~~~~gkpv~~atq~leS 75 (264)
|+++.+++||||++|++|+|||+++ +|+++||++||+.++|. ++|..++++++.+|+++|||+++.
T Consensus 164 ~~~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~------ 237 (287)
T 2v5j_A 164 NDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL------ 237 (287)
T ss_dssp HHHCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE------
T ss_pred CCCcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe------
Confidence 3458999999999999999999986 99999999999999986 568899999999999999999872
Q ss_pred hhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 76 MIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 76 M~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
...|..+ ..++.+|++.+..+.+
T Consensus 238 ---~~d~~~a-----~~~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 238 ---IANEQLA-----KRYLELGALFVAVGVD 260 (287)
T ss_dssp ---CCCHHHH-----HHHHHTTCSEEEEEEH
T ss_pred ---cCCHHHH-----HHHHHhCCCEEEECcH
Confidence 2345433 4567778777777655
No 14
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.37 E-value=2.3e-13 Score=121.48 Aligned_cols=89 Identities=22% Similarity=0.342 Sum_probs=76.6
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhh--cceeeecCCCcccCCCC------CChHHHHHHHHHHHHHhCCCEEEEhhhhhh
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILA--SDGAMVARGDLGAQVPL------EQVPSIQEKIVQLCRQLNKPVIVASQLLES 75 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~------~~v~~~qk~ii~~~~~~gkpv~~atq~leS 75 (264)
|.++.+++||||++|++|+|+|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+
T Consensus 143 ~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~----- 217 (256)
T 1dxe_A 143 NKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA----- 217 (256)
T ss_dssp TTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC-----
T ss_pred CcccEEEEEECCHHHHHhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec-----
Confidence 5679999999999999999999985 99999999999999986 5689999999999999999998722
Q ss_pred hhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 76 MIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 76 M~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
..|. +...++..|++.+..+.+
T Consensus 218 ----~d~~-----~~~~~~~~G~~~~s~~~d 239 (256)
T 1dxe_A 218 ----PVEA-----DARRYLEWGATFVAVGSD 239 (256)
T ss_dssp ----CSHH-----HHHHHHHTTCCEEEEEEH
T ss_pred ----CCHH-----HHHHHHHcCCCEEEechH
Confidence 2333 346778899999888866
No 15
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.28 E-value=1.7e-12 Score=116.27 Aligned_cols=91 Identities=18% Similarity=0.241 Sum_probs=78.7
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhh--cceeeecCCCcccCCCC------CChHHHHHHHHHHHHHhCCCEEEEhhhhhh
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILA--SDGAMVARGDLGAQVPL------EQVPSIQEKIVQLCRQLNKPVIVASQLLES 75 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~------~~v~~~qk~ii~~~~~~gkpv~~atq~leS 75 (264)
|+++.+++||||++|+.|+|||+++ +|+++||++||+.++|. +++..++++++.+|+++|||+++.+
T Consensus 141 ~~~~~v~~mIEt~~av~~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~----- 215 (261)
T 3qz6_A 141 NDEIFIMAQIEHVKAVEDIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT----- 215 (261)
T ss_dssp HTTCEEEEEECCHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE-----
T ss_pred CCCeEEEEEECCHHHHHHHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe-----
Confidence 5678999999999999999999965 99999999999999986 4799999999999999999999853
Q ss_pred hhhCCCCChHHHHHHHHHHHhccccccccccc
Q 024709 76 MIEYPIPTRAEVADVSELVRQQADALMLSGES 107 (264)
Q Consensus 76 M~~~~~ptrae~~dv~~~v~~g~d~~~ls~et 107 (264)
..|..++ ...+..|+|.+.++.|+
T Consensus 216 ----~~~~~~~----~~~~~~G~~~~s~~~D~ 239 (261)
T 3qz6_A 216 ----AADAAKM----GWAVERGAQMLLWSGDV 239 (261)
T ss_dssp ----SSCGGGG----HHHHHTTCCEEEEEEHH
T ss_pred ----CCHHHHH----HHHHHCCCCEEEEhhHH
Confidence 3565552 35578999999998773
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=98.99 E-value=1.8e-10 Score=103.92 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=71.4
Q ss_pred cceEEEeccCHHHHhcHHHHHhh--cceeeecCCCcccCCCC------CChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA--SDGAMVARGDLGAQVPL------EQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~------~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
++.++++|||++|+.|+++|++. +|++++|++||+.++|. +.+..++++++.+|+++|||++-. +.
T Consensus 121 ~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~------v~ 194 (284)
T 1sgj_A 121 PLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDI------VV 194 (284)
T ss_dssp CCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC------CC
T ss_pred CeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC------Cc
Confidence 67899999999999999999974 99999999999999987 679999999999999999998521 11
Q ss_pred hCCCCChHH--HHHHHHHHHhccccccc
Q 024709 78 EYPIPTRAE--VADVSELVRQQADALML 103 (264)
Q Consensus 78 ~~~~ptrae--~~dv~~~v~~g~d~~~l 103 (264)
+...-.+ ..+...+...|+|+-+.
T Consensus 195 --~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 195 --TALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp --CCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 1111111 14567788999985443
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=98.91 E-value=5.8e-10 Score=102.82 Aligned_cols=92 Identities=12% Similarity=0.081 Sum_probs=76.2
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCccc-CCC---------------CCChHHHHHHHHHHHHHhCCCEE
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGA-QVP---------------LEQVPSIQEKIVQLCRQLNKPVI 67 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~-~~~---------------~~~v~~~qk~ii~~~~~~gkpv~ 67 (264)
|+++.+.+||||+.|+.|+|+|++++|+++||+.||+. .++ .+.|..+.++++.+|+++|||++
T Consensus 172 ~~~~~vg~mIEtp~av~~~d~Ia~~vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vg 251 (324)
T 2xz9_A 172 DKEIKVGIMVEIPSAAVTADILAKEVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAA 251 (324)
T ss_dssp CTTCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEEEECcHHHHHHHHHHHHhCcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCcee
Confidence 45799999999999999999999999999999999995 333 35688899999999999999999
Q ss_pred EEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 68 VASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 68 ~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
+++++- ..| ..+..++..|+|.+..+.+
T Consensus 252 vcge~~------~dp-----~~~~~l~~lG~~~~si~p~ 279 (324)
T 2xz9_A 252 MCGEMA------GDP-----LAAVILLGLGLDEFSMSAT 279 (324)
T ss_dssp ECSGGG------GCH-----HHHHHHHHHTCCEEEECGG
T ss_pred ecCccC------CCH-----HHHHHHHHCCCCEEEEChh
Confidence 988642 234 2336788999999766643
No 18
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=98.57 E-value=1.9e-08 Score=102.60 Aligned_cols=91 Identities=19% Similarity=0.206 Sum_probs=77.4
Q ss_pred cceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccC-CCC---------------CChHHHHHHHHHHHHHhCCCEEEE
Q 024709 6 NIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQ-VPL---------------EQVPSIQEKIVQLCRQLNKPVIVA 69 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~-~~~---------------~~v~~~qk~ii~~~~~~gkpv~~a 69 (264)
.+.+.+|||++.|+.|+|+|++++|+++||+.||+.. ++. +.|..+.++++++|+++|||++++
T Consensus 673 ~~~vg~MIEtp~a~~~ad~ia~~vD~~siGtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgic 752 (794)
T 2ols_A 673 GLRLIMMCELPSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGIC 752 (794)
T ss_dssp GCCEEEEECSHHHHHTHHHHHTTSSEEEEEHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCEEEEEECcHHHHHHHHHHHHhCCEEEECHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEe
Confidence 4899999999999999999999999999999999987 674 458899999999999999999999
Q ss_pred hhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 70 SQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 70 tq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
.|+--. .|.. +..++..|+|.+.++.+
T Consensus 753 Ge~~~~-----dp~~-----~~~~~~~G~~~~s~~p~ 779 (794)
T 2ols_A 753 GQGPSD-----HPDF-----AKWLVEEGIESVSLNPD 779 (794)
T ss_dssp SSHHHH-----CHHH-----HHHHHHHTCCEEEECGG
T ss_pred cccCCC-----CHHH-----HHHHHHCCCCEEEECHh
Confidence 876410 3333 36788999999988754
No 19
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=98.57 E-value=3.1e-08 Score=97.56 Aligned_cols=91 Identities=11% Similarity=0.029 Sum_probs=77.3
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccC-CC---------------CCChHHHHHHHHHHHHHhCCCEE
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQ-VP---------------LEQVPSIQEKIVQLCRQLNKPVI 67 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~-~~---------------~~~v~~~qk~ii~~~~~~gkpv~ 67 (264)
|+++.+.+|||++.|+.|+|+|++++|++.||..||+.- ++ .+.|..+.++++++|+++|||++
T Consensus 423 ~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vg 502 (572)
T 2wqd_A 423 SDDIELGIMVEIPATAALADVFAKEVDFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTG 502 (572)
T ss_dssp CSCCEEEEEECCHHHHHTHHHHHHHCSEEEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEE
Confidence 567899999999999999999999999999999999831 21 25688999999999999999999
Q ss_pred EEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccc
Q 024709 68 VASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 68 ~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
++.++- ..|..+ ..++..|+|.+..|.
T Consensus 503 iCGe~a------gdp~~~-----~~l~~lG~~~~S~~p 529 (572)
T 2wqd_A 503 MCGEMA------GDETAI-----PLLLGLGLDEFSMSA 529 (572)
T ss_dssp ECSGGG------GCTTTH-----HHHHHHTCCEEEECH
T ss_pred EeCCcc------CCHHHH-----HHHHHCCCCEEEecc
Confidence 988733 466666 578899999998773
No 20
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=98.56 E-value=4.7e-08 Score=96.30 Aligned_cols=92 Identities=12% Similarity=0.047 Sum_probs=77.9
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhhcceeeecCCCccc----------CCC------CCChHHHHHHHHHHHHHhCCCEE
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGA----------QVP------LEQVPSIQEKIVQLCRQLNKPVI 67 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~----------~~~------~~~v~~~qk~ii~~~~~~gkpv~ 67 (264)
|+++.+.+|||++.|+.++|+|++++|++.||..||+. .++ .+.|..+.++++++|+++|||++
T Consensus 421 ~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vg 500 (575)
T 2hwg_A 421 DESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTG 500 (575)
T ss_dssp CTTCEEEEEECSHHHHHTHHHHHTTCSEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEEEECcHHHHHHHHHHHHhCCEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEE
Confidence 45789999999999999999999999999999999998 544 26788899999999999999999
Q ss_pred EEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 68 VASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 68 ~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
++.++ ...|..+ ..++..|+|.+..+..
T Consensus 501 vCGe~------agdp~~~-----~~l~~lG~~~~S~~p~ 528 (575)
T 2hwg_A 501 MCGEL------AGDERAT-----LLLLGMGLDEFSMSAI 528 (575)
T ss_dssp ECSTT------TTCTTTH-----HHHHHTTCCEEEECGG
T ss_pred EeCCC------CCCHHHH-----HHHHHCCCCEEEECcc
Confidence 98862 2466554 5788999999777644
No 21
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=98.48 E-value=1.1e-07 Score=85.39 Aligned_cols=92 Identities=16% Similarity=0.111 Sum_probs=70.1
Q ss_pred cceEEEeccCHHHHhcHHHHHhh--cceeeecCCCcccCCCCC-----------ChHHHHHHHHHHHHHhCCCEEEEhhh
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA--SDGAMVARGDLGAQVPLE-----------QVPSIQEKIVQLCRQLNKPVIVASQL 72 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~-----------~v~~~qk~ii~~~~~~gkpv~~atq~ 72 (264)
++.++++|||++|+.|++||+.. +||+++|+.||+.++|.. .+..+..+++..|+++||+++- +
T Consensus 104 ~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid-~-- 180 (273)
T 1u5h_A 104 PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIATLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALD-A-- 180 (273)
T ss_dssp TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHHHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEE-C--
T ss_pred hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHHhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCccc-C--
Confidence 57899999999999999999976 899999999999999852 2666778999999999998852 1
Q ss_pred hhhhhhCCCCChHH-HHHHHHHHHhcccccccc
Q 024709 73 LESMIEYPIPTRAE-VADVSELVRQQADALMLS 104 (264)
Q Consensus 73 leSM~~~~~ptrae-~~dv~~~v~~g~d~~~ls 104 (264)
+ .....+..- ..+...+...|+|+-+.-
T Consensus 181 ---v-~~~~~d~~gl~~~~~~~~~~Gf~Gk~~I 209 (273)
T 1u5h_A 181 ---V-HLDILDVEGLQEEARDAAAVGFDVTVCI 209 (273)
T ss_dssp ---C-CSCTTCHHHHHHHHHHHHHHTCSEEEES
T ss_pred ---C-cCCCCCHHHHHHHHHHHHhCCCCceeec
Confidence 0 111111111 256778889999876653
No 22
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=98.36 E-value=2.2e-07 Score=85.26 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=69.9
Q ss_pred CCcceEEEeccCHHHHhcHHHHHhh---cceeeecCCCcccCCCC----CChHHHHHHHHHHHHHhCCCEEEEhhhhhhh
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIILA---SDGAMVARGDLGAQVPL----EQVPSIQEKIVQLCRQLNKPVIVASQLLESM 76 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~~---~Dgi~i~rgdL~~~~~~----~~v~~~qk~ii~~~~~~gkpv~~atq~leSM 76 (264)
+.++.++++|||++|+.|+++|++. .|++++|..||+.++|. +.+..+..+++..|+++|++++=
T Consensus 155 ~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id-------- 226 (316)
T 3qll_A 155 GSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAADMAADIGAASTWEPLALARARLVSACAMNGIPAID-------- 226 (316)
T ss_dssp --CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEE--------
T ss_pred CCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceee--------
Confidence 3468899999999999999999993 89999999999999986 34667778999999999999842
Q ss_pred hhCCCCChHH----HHHHHHHHHhccccccc
Q 024709 77 IEYPIPTRAE----VADVSELVRQQADALML 103 (264)
Q Consensus 77 ~~~~~ptrae----~~dv~~~v~~g~d~~~l 103 (264)
.+.+.... ..++..+...|+++-+.
T Consensus 227 --~v~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 227 --APFFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp --CCCSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred --ccccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 22222221 35677788899986443
No 23
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=98.27 E-value=5.6e-07 Score=83.04 Aligned_cols=89 Identities=10% Similarity=-0.074 Sum_probs=68.4
Q ss_pred CcceEEEeccCHHHHhcHHHHHhh--cceeeecCCCcccCCCCC---------------ChHHHHHHHHHHHHHhCCCEE
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILA--SDGAMVARGDLGAQVPLE---------------QVPSIQEKIVQLCRQLNKPVI 67 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~---------------~v~~~qk~ii~~~~~~gkpv~ 67 (264)
..+.++++|||++|+.|+++|++. .|++++|++||..+++.. .+..+..+++..|+.+|++++
T Consensus 144 ~~i~l~~~IET~~gv~~~~eIaa~~rv~~L~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~i 223 (332)
T 3qqw_A 144 KPVPVHVLIETHGALRDVFQIAELPNIEVLDFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPA 223 (332)
T ss_dssp SCCCEEEEECSHHHHHTHHHHTTSTTEEEEEECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEEecCHHHHHHHHHHhcCcCCCEEEEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcc
Confidence 468899999999999999999965 899999999999988751 155677899999999999984
Q ss_pred EEhhhhhhhhhCCCCChH--H--HHHHHHHH-Hhccccccc
Q 024709 68 VASQLLESMIEYPIPTRA--E--VADVSELV-RQQADALML 103 (264)
Q Consensus 68 ~atq~leSM~~~~~ptra--e--~~dv~~~v-~~g~d~~~l 103 (264)
= .+.+... | ..+...+. ..|+|+-+.
T Consensus 224 d----------~v~~d~~D~~gl~~~~~~~~~~lGf~Gk~~ 254 (332)
T 3qqw_A 224 H----------NVCLNLKDAEVIASDACRARNEFGFLRMWS 254 (332)
T ss_dssp E----------CCCSCSSCHHHHHHHHHHHHHHHCCCEEEE
T ss_pred c----------CCcccccCHHHHHHHHHHHHHhCCCCcccc
Confidence 2 2222221 2 24566777 789996444
No 24
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=98.20 E-value=9.6e-07 Score=81.74 Aligned_cols=89 Identities=10% Similarity=0.009 Sum_probs=67.0
Q ss_pred CcceEEEeccCHHHHhcHHHHHhh--cceeeecCCCcccCCCCC---------------ChHHHHHHHHHHHHHhCCCEE
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILA--SDGAMVARGDLGAQVPLE---------------QVPSIQEKIVQLCRQLNKPVI 67 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~---------------~v~~~qk~ii~~~~~~gkpv~ 67 (264)
..+.++++|||++|+.|+++|++. .|++++|.+||..+++.. .+..+..+++..|+.+|++++
T Consensus 143 ~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~i 222 (339)
T 3r4i_A 143 QPVPVQLLVETHGALTRVFDLAALPGVEALSFGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPS 222 (339)
T ss_dssp SCCCEEEEECSHHHHHTHHHHHTCTTEEEEEECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCcEEEEEeccHHHHHhHHHHHcCcCCCEEEECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCc
Confidence 468899999999999999999955 899999999999988741 155677899999999999985
Q ss_pred EEhhhhhhhhhCCCCCh---HH-HHHHHHHH-Hhccccccc
Q 024709 68 VASQLLESMIEYPIPTR---AE-VADVSELV-RQQADALML 103 (264)
Q Consensus 68 ~atq~leSM~~~~~ptr---ae-~~dv~~~v-~~g~d~~~l 103 (264)
= .+.+.. +- ..+...+. ..|+|+-+.
T Consensus 223 d----------~v~~d~~D~~gl~~~~~~~~~~lGf~Gk~~ 253 (339)
T 3r4i_A 223 H----------NVSTEVRDMSVVANDAARARNEFGYTRMWS 253 (339)
T ss_dssp E----------CCCCCSSCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred c----------CCCcCCCChHHHHHHHHHHHHhCCCCccee
Confidence 2 122222 11 23555665 689986443
No 25
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=97.90 E-value=7.4e-06 Score=84.20 Aligned_cols=90 Identities=16% Similarity=0.024 Sum_probs=76.0
Q ss_pred cceEEEeccCHHHHhcHHHHHhhcceeeecCCCcc-cCCCC----------------------------CChHHHHHHHH
Q 024709 6 NIAVIAKIESIDSLKNLNEIILASDGAMVARGDLG-AQVPL----------------------------EQVPSIQEKIV 56 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~-~~~~~----------------------------~~v~~~qk~ii 56 (264)
++.+.+|||++.|+.|+|+|++.+|++.||..||+ ..++. +.|....++++
T Consensus 742 ~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~ 821 (876)
T 1vbg_A 742 GYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFAT 821 (876)
T ss_dssp CCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHH
T ss_pred CcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHH
Confidence 57899999999999999999999999999999998 33332 56888889999
Q ss_pred HHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 57 QLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 57 ~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
++|+++ ||||+++.|+= ..|.-+ .-.+..|.|.+-.|..
T Consensus 822 ~~~~~~~~g~~vgiCGe~~------gdP~~~-----~~l~~~Gl~~vS~sp~ 862 (876)
T 1vbg_A 822 ERGRKARPNLKVGICGEHG------GEPSSV-----AFFAKAGLDYVSCSPF 862 (876)
T ss_dssp HHHHHHSTTCEEEEESGGG------GSHHHH-----HHHHHTTCSEEEECGG
T ss_pred HHHHHhCCCCEEEEcCCcC------CCHHHH-----HHHHHcCCCEEEECcc
Confidence 999998 99999998743 356555 5678999999988854
No 26
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=97.82 E-value=1.3e-05 Score=76.11 Aligned_cols=89 Identities=10% Similarity=0.013 Sum_probs=70.6
Q ss_pred cceEEEeccCHHH---HhcHHHHHhh-------cceeeecCCCcccCCCC-------CChHHHHHHHHHHHHHhCCCEEE
Q 024709 6 NIAVIAKIESIDS---LKNLNEIILA-------SDGAMVARGDLGAQVPL-------EQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 6 ~~~iiakIE~~~~---~~n~~eI~~~-------~Dgi~i~rgdL~~~~~~-------~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
.+.++++|||++| +.|+++|+.+ ++|+++|+.||+.++|. +.+..+-.+++..|+.+|++.+=
T Consensus 150 ~i~lialIETa~g~~~L~na~eIAaasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aID 229 (433)
T 3oyz_A 150 SLAMSVIIESGEAELAMGDLRDEMGKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVD 229 (433)
T ss_dssp CSEEEEEECSHHHHHHGGGHHHHHHCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEEEeChhHHHHHHHHHHHHhhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCccc
Confidence 6789999999999 9999999976 58999999999998875 24777788999999999998752
Q ss_pred EhhhhhhhhhCCCCCh--HH--HHHHHHHHHhcccccccc
Q 024709 69 ASQLLESMIEYPIPTR--AE--VADVSELVRQQADALMLS 104 (264)
Q Consensus 69 atq~leSM~~~~~ptr--ae--~~dv~~~v~~g~d~~~ls 104 (264)
.+.+.. .| ..+...+...|+|+-+.-
T Consensus 230 ----------gV~~di~D~egL~~ea~~ar~lGF~GK~~I 259 (433)
T 3oyz_A 230 ----------GPYDDIRDVEGYRERMTDNQAKGMLGIWSL 259 (433)
T ss_dssp ----------CCCCCTTCHHHHHHHHHHHHTTTCCEEEEC
T ss_pred ----------ccccCCCCHHHHHHHHHHHHhCCCCceEec
Confidence 122221 12 257788889999986653
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=97.62 E-value=3.3e-05 Score=79.38 Aligned_cols=90 Identities=13% Similarity=-0.009 Sum_probs=75.8
Q ss_pred cceEEEeccCHHHHhcHHHHHhhcceeeecCCCcc-cCCCC----------------------------CChHHHHHHHH
Q 024709 6 NIAVIAKIESIDSLKNLNEIILASDGAMVARGDLG-AQVPL----------------------------EQVPSIQEKIV 56 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~-~~~~~----------------------------~~v~~~qk~ii 56 (264)
++.+.+|||++.|+.+.|+|++.+|++.||..||+ ..++. +-|-...++++
T Consensus 736 ~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~ 815 (873)
T 1kbl_A 736 QYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAV 815 (873)
T ss_dssp CCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHH
T ss_pred CcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHH
Confidence 57899999999999999999999999999999998 33332 56788899999
Q ss_pred HHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 57 QLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 57 ~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
++|+++ ||||+++.|+= ..|.-+ .-.+..|.|.+-.|..
T Consensus 816 ~~~~~~~~g~~vgiCGe~~------gdP~~~-----~~l~~~Gl~~vS~sp~ 856 (873)
T 1kbl_A 816 KKGRQTRPGLKCGICGEHG------GDPSSV-----EFCHKVGLNYVSCSPF 856 (873)
T ss_dssp HHHHHHCTTCEEEECSGGG------GSHHHH-----HHHHHTTCSEEEECGG
T ss_pred HHHHHhCCCCeEEECCCCC------CCHHHH-----HHHHHcCCCEEEEChh
Confidence 999998 99999998743 356555 5678999999988844
No 28
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=96.58 E-value=0.016 Score=49.30 Aligned_cols=107 Identities=15% Similarity=0.084 Sum_probs=75.0
Q ss_pred chHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEc-------C-----ChhhhhhcccccccEEEEec
Q 024709 153 IPGEICNGAAKIANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFA-------P-----MSSVRRRLNLQWGLVPFCLN 220 (264)
Q Consensus 153 ~~~aIA~aAv~lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT-------~-----~~~~aR~L~L~~GV~P~~~~ 220 (264)
-++.....|.+.|.+++.+-||+.|.+|.||+.+...-....+++|| | ++++.+.| --.|+.-+-..
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L-~~~G~~V~t~t 105 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEEL-RKRGAKIVRQS 105 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHH-HHTTCEEEECC
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHH-HhCCCEEEEEe
Confidence 36788888999999999999999999999999998877778999999 3 34444444 22333332211
Q ss_pred ------------CC--CCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEec---CCceEEEE
Q 024709 221 ------------FS--DDMESNLNQTFS---------------LLKARGLIKSGDLIIVVSD---MLQCIQVI 261 (264)
Q Consensus 221 ------------~~--~~~e~~i~~al~---------------~~~~~g~~~~GD~VVvvsG---~~~~i~v~ 261 (264)
.+ -.+.+.+.+++. .+.+.|++.. +.||.+.| +.||--|.
T Consensus 106 H~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT~~GaDTAlVi 177 (201)
T 1vp8_A 106 HILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGRSRGADTAVVI 177 (201)
T ss_dssp CTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECSSSSCCEEEEE
T ss_pred ccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccccCCcceEEEE
Confidence 11 124444544444 5678999999 89999988 46665544
No 29
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=96.27 E-value=0.021 Score=48.70 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=71.4
Q ss_pred hHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcC------------ChhhhhhcccccccEEEEec-
Q 024709 154 PGEICNGAAKIANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAP------------MSSVRRRLNLQWGLVPFCLN- 220 (264)
Q Consensus 154 ~~aIA~aAv~lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~------------~~~~aR~L~L~~GV~P~~~~- 220 (264)
++.....|.+.|.+++.+-||+.|.+|.||+.+...-.+ .+++||. ++++.+.| --.|+.-+-..
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L-~~~G~~V~t~tH 113 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTHHAGFREKGQLELEDEARDAL-LERGVNVYAGSH 113 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCSSCHHHHHHH-HHHTCEEECCSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeCcCCCCCCCCCcCCHHHHHHH-HhCCCEEEEeec
Confidence 678888899999999999999999999999999886655 8999993 34444443 11222222110
Q ss_pred -----------CC--CCHHHHHHH--------------HHHHHHHcCCCCCCCEEEEEec---CCceEEEE
Q 024709 221 -----------FS--DDMESNLNQ--------------TFSLLKARGLIKSGDLIIVVSD---MLQCIQVI 261 (264)
Q Consensus 221 -----------~~--~~~e~~i~~--------------al~~~~~~g~~~~GD~VVvvsG---~~~~i~v~ 261 (264)
.+ -.+.+.+.+ ..-.+.+.|++..|+.||.+.| +.||--|.
T Consensus 114 ~lsG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGGT~~GaDTAlVi 184 (206)
T 1t57_A 114 ALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGTAWGADTALVL 184 (206)
T ss_dssp TTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECSSSSCCEEEEE
T ss_pred cccchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEccccCCcceEEEE
Confidence 00 112233322 2235678999999999999988 46665554
No 30
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=95.55 E-value=0.019 Score=59.29 Aligned_cols=90 Identities=14% Similarity=-0.004 Sum_probs=74.6
Q ss_pred cceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccC-CCC----------------------------CChHHHHHHHH
Q 024709 6 NIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQ-VPL----------------------------EQVPSIQEKIV 56 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~-~~~----------------------------~~v~~~qk~ii 56 (264)
++.+-.|||+|.+.-..|+|++.+|++=||-.||+-- ++. +-|-...+..+
T Consensus 762 ~~~vG~MiEvPsaal~ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai 841 (913)
T 1h6z_A 762 HYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAV 841 (913)
T ss_dssp CCEEEEEECSHHHHHTHHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHH
T ss_pred CceEEEEecchHHHHHHHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHH
Confidence 5789999999999999999999999999999998631 111 56778889999
Q ss_pred HHHHH--hCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 57 QLCRQ--LNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 57 ~~~~~--~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
++|++ .|+||+++.|+= ..|.-+ .-.+..|.|.+-.|..
T Consensus 842 ~~a~~~~~g~~vgICGE~~------gdP~~~-----~~l~~~Gid~vS~sp~ 882 (913)
T 1h6z_A 842 TKGRRVKPMLKMGICGEHG------GDPATI-----GFCHKVGLDYVSCSPF 882 (913)
T ss_dssp HHHHHHSTTCEEEECSGGG------GCHHHH-----HHHHHHTCSEEEECGG
T ss_pred HHHHhcCCCCEEEEcCCCC------CCHHHH-----HHHHHcCCCEEEECch
Confidence 99997 699999999864 356665 5678899999999844
No 31
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=95.34 E-value=0.018 Score=56.05 Aligned_cols=95 Identities=16% Similarity=0.098 Sum_probs=65.9
Q ss_pred CcceEEEeccCHHHHhcHHHHHhh----cceeeecCCCcccCCCC----------C----------ChHHHHHHHHHHHH
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILA----SDGAMVARGDLGAQVPL----------E----------QVPSIQEKIVQLCR 60 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~----~Dgi~i~rgdL~~~~~~----------~----------~v~~~qk~ii~~~~ 60 (264)
..+++.+.|||..|+-|++||+.. +.|+..|+.|+..++.. + -+...++.++..|+
T Consensus 240 gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~ 319 (532)
T 3cuz_A 240 GTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCH 319 (532)
T ss_dssp TCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeccHHHHHhHHHHHHhccCCceEEEcCHHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHH
Confidence 357899999999999999999975 66999999999876520 1 13444555559999
Q ss_pred HhCCCEEE--EhhhhhhhhhCCCCCh-----H-HHHHHHHHHHhcccccccc
Q 024709 61 QLNKPVIV--ASQLLESMIEYPIPTR-----A-EVADVSELVRQQADALMLS 104 (264)
Q Consensus 61 ~~gkpv~~--atq~leSM~~~~~ptr-----a-e~~dv~~~v~~g~d~~~ls 104 (264)
++|++.|= +-+ . .-..|.. + =..|......+|+|+-+.-
T Consensus 320 a~G~~aIdGm~a~-~----p~kD~e~~~~~~~~l~~dk~~~~~~GfdGkwvi 366 (532)
T 3cuz_A 320 KRGAFAMGGMAAF-I----PSKDEEHNNQVLNKVKADKSLEANNGHDGTWIA 366 (532)
T ss_dssp HTTCEEEEEEECB-C----CCSSGGGCHHHHHHHHHHHHHHHHHTCSEEEES
T ss_pred HcCCCCccCcccc-C----CCCChhHHHHHHHHHHHHHHHHHHCCCCccccC
Confidence 99998763 211 1 0011221 0 1257777889999998775
No 32
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=94.72 E-value=0.01 Score=57.74 Aligned_cols=94 Identities=22% Similarity=0.262 Sum_probs=67.5
Q ss_pred CcceEEEeccCHHHHhcHHHHHhh----cceeeecCCCcccCCCC--------------------CChHHHHHHHHHHHH
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILA----SDGAMVARGDLGAQVPL--------------------EQVPSIQEKIVQLCR 60 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~----~Dgi~i~rgdL~~~~~~--------------------~~v~~~qk~ii~~~~ 60 (264)
..+++.++|||..|+-|++||+.. +.|+..||.|+..++.. +-+..+.+.++..|+
T Consensus 237 gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~ 316 (528)
T 3cux_A 237 GTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFLKAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCH 316 (528)
T ss_dssp TCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHHHHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhhhhccCCccccchhhhhcccccHHHHHHHHHHHHHHH
Confidence 368999999999999999999965 56999999999876531 124566778889999
Q ss_pred HhCCCEEEEhhhhhhhhhCCCCCh----------HH-HHHHHHHHHhccccccccc
Q 024709 61 QLNKPVIVASQLLESMIEYPIPTR----------AE-VADVSELVRQQADALMLSG 105 (264)
Q Consensus 61 ~~gkpv~~atq~leSM~~~~~ptr----------ae-~~dv~~~v~~g~d~~~ls~ 105 (264)
++|++.|= -|-. -.|.+ +. ..|-.....+|+|+-+.-.
T Consensus 317 a~G~~aIg------Gm~a-~ip~~~D~~~n~~~~~~~~~dk~~~~~~GfdGkwviH 365 (528)
T 3cux_A 317 RRNAPAIG------GMAA-QIPIKNNPEANEAAFEKVRADKEREALDGHDGTWVAH 365 (528)
T ss_dssp HTTCCEEC--------------------------CHHHHHHHHHHHHTCSBEEESS
T ss_pred HcCCCCcc------cccc-cCcCcCChHHHHHHHHHHHHHHHHHHhCCCCcccccC
Confidence 99998763 1211 12322 12 2566788899999988863
No 33
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=93.61 E-value=0.025 Score=56.57 Aligned_cols=95 Identities=14% Similarity=0.057 Sum_probs=68.8
Q ss_pred CcceEEEeccCHHHHhcHHHHHhh----cceeeecCCCcccCC-CC----------------CChHHHHHHHHH---HHH
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILA----SDGAMVARGDLGAQV-PL----------------EQVPSIQEKIVQ---LCR 60 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~----~Dgi~i~rgdL~~~~-~~----------------~~v~~~qk~ii~---~~~ 60 (264)
..+++.++|||+.|+-|++||+.. +-|+..|+.|+..++ .. +-+..+++..+. .|+
T Consensus 418 gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcr 497 (731)
T 1p7t_A 418 NTLKMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCG 497 (731)
T ss_dssp TCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTT
T ss_pred CceEEEEEECCHHHHHhHHHHHHhhccceEEEEcCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHH
Confidence 368899999999999999999853 679999999998774 21 113345577776 899
Q ss_pred HhCCCEEEEhhhhhhhhhCCCCChHH--HHHHHHHHHhcccccccccc
Q 024709 61 QLNKPVIVASQLLESMIEYPIPTRAE--VADVSELVRQQADALMLSGE 106 (264)
Q Consensus 61 ~~gkpv~~atq~leSM~~~~~ptrae--~~dv~~~v~~g~d~~~ls~e 106 (264)
++|++.|=- .|- +.|..-+ ..|......+|+|+-++-.=
T Consensus 498 aaG~~aIgk-----Gm~--a~p~dmeg~~~dk~~~~~~GfdGkwViHP 538 (731)
T 1p7t_A 498 LRGKAQIGK-----GMW--AMPDLMADMYSQKGDQLRAGANTAWVPSP 538 (731)
T ss_dssp CTTTSEEEE-----CCC--CCTTCHHHHHHHTHHHHHTTCSEEEESSH
T ss_pred HcCCCCccc-----ccc--cChhhHHHHHHHHHHHHhCCCCCcccCCH
Confidence 999987631 122 2344433 35777788999999888643
No 34
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=91.41 E-value=0.68 Score=47.84 Aligned_cols=90 Identities=14% Similarity=0.022 Sum_probs=68.9
Q ss_pred cceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccC-CCC----------------------------CChHHHHHHHH
Q 024709 6 NIAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQ-VPL----------------------------EQVPSIQEKIV 56 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~-~~~----------------------------~~v~~~qk~ii 56 (264)
+..|-.|||.|.+.-..|+|++.+|++=||-.||.-= ++. +-|....+..+
T Consensus 762 ~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~ 841 (913)
T 2x0s_A 762 HYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAV 841 (913)
T ss_dssp CCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGGCHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHH
T ss_pred CCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCCchhhhhhhhhccccccCCCchhHHHHHHHHHHHHH
Confidence 5788899999999999999999999999999998431 111 24555566666
Q ss_pred HHHHHhC--CCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 57 QLCRQLN--KPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 57 ~~~~~~g--kpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
++|++.+ .||++|.||= ..|.-+ .-.+..|.|.+-+|..
T Consensus 842 ~~gr~~~~~i~vgICGE~~------gdP~~~-----~~L~~~Gid~~S~sP~ 882 (913)
T 2x0s_A 842 TKGRRVKPMLKMGICGEHG------GDPATI-----GFCHKVGLDYVSCSPF 882 (913)
T ss_dssp HHHHHHSTTCEEEECSGGG------GCHHHH-----HHHHHHTCSEEEECGG
T ss_pred HHhhhcCCCCeEEEeCCcc------cCHHHH-----HHHHHcCCCEEEEChH
Confidence 6676665 5899999864 356555 5788999999999844
No 35
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=85.00 E-value=2 Score=41.83 Aligned_cols=81 Identities=17% Similarity=0.269 Sum_probs=55.7
Q ss_pred EEEeccCHHHHhcHHHHHhh-cceeeecCCCcccC-------CCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC
Q 024709 9 VIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQ-------VPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP 80 (264)
Q Consensus 9 iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~-------~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~ 80 (264)
|.--+-|.++..++- .. +|+|-||-|-=++= +|.+. ..+.....+.|+++|+|+|- .-.
T Consensus 326 iaGNVaT~e~a~~Li---~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ-~tAi~~~a~~a~~~~vpvIA---------DGG 392 (556)
T 4af0_A 326 IAGNVVTREQAAQLI---AAGADGLRIGMGSGSICITQEVMAVGRPQ-GTAVYAVAEFASRFGIPCIA---------DGG 392 (556)
T ss_dssp EEEEECSHHHHHHHH---HHTCSEEEECSSCSTTBCCTTTCCSCCCH-HHHHHHHHHHHGGGTCCEEE---------ESC
T ss_pred EeccccCHHHHHHHH---HcCCCEEeecCCCCcccccccccCCCCcH-HHHHHHHHHHHHHcCCCEEe---------cCC
Confidence 344788888877653 34 99999887763321 12233 34556777888999999996 112
Q ss_pred CCChHHHHHHHHHHHhccccccccc
Q 024709 81 IPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 81 ~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
.- -.-|++-|+..|||+|||.+
T Consensus 393 I~---~sGDi~KAlaaGAd~VMlGs 414 (556)
T 4af0_A 393 IG---NIGHIAKALALGASAVMMGG 414 (556)
T ss_dssp CC---SHHHHHHHHHTTCSEEEEST
T ss_pred cC---cchHHHHHhhcCCCEEEEch
Confidence 21 24699999999999999963
No 36
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=82.95 E-value=3 Score=36.92 Aligned_cols=81 Identities=16% Similarity=0.234 Sum_probs=57.2
Q ss_pred cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccccc
Q 024709 29 SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESA 108 (264)
Q Consensus 29 ~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta 108 (264)
.|.||.-....|.-.|..+ +...+.+.+ ..+.|||+... .-|. +|++.++..|+|+|++++-..
T Consensus 157 ~~aVmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~eGG---------I~TP---sDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 157 CIAVMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVDAG---------VGTA---SDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp CSEEEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEESC---------CCSH---HHHHHHHHHTCSEEEESHHHH
T ss_pred CCEEEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEeCC---------CCCH---HHHHHHHHcCCCEEEEChHHh
Confidence 7888774344555555555 555566665 46899998543 2222 466999999999999998878
Q ss_pred CCCChHHHHHHHHHHHH
Q 024709 109 MGQFPDKALAVLRSVSL 125 (264)
Q Consensus 109 ~G~yP~eav~~m~~i~~ 125 (264)
.++.|.+-.+.+..-+.
T Consensus 221 ~a~dP~~ma~af~~Av~ 237 (265)
T 1wv2_A 221 HAKDPVMMAEAMKHAIV 237 (265)
T ss_dssp TSSSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 89999877777766543
No 37
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=79.50 E-value=1.8 Score=39.17 Aligned_cols=88 Identities=15% Similarity=0.305 Sum_probs=63.4
Q ss_pred CCcceEEEeccCH--------HHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhh
Q 024709 4 LVNIAVIAKIESI--------DSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLE 74 (264)
Q Consensus 4 ~~~~~iiakIE~~--------~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~le 74 (264)
.+.+.++++.|+. +-.+.++.++.. .-+|+++|||+- -+.+++.|+++|.|+.. |
T Consensus 47 ~~RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~-T---- 110 (314)
T 1ko7_A 47 SDRIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLIT-S---- 110 (314)
T ss_dssp TTSEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEE-C----
T ss_pred cccEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEE-E----
Confidence 3477888877762 233556666654 789999999983 23589999999999985 2
Q ss_pred hhhhCCCCChHHHHHHHHHHHh---------------ccccccccccccCCCC
Q 024709 75 SMIEYPIPTRAEVADVSELVRQ---------------QADALMLSGESAMGQF 112 (264)
Q Consensus 75 SM~~~~~ptrae~~dv~~~v~~---------------g~d~~~ls~eta~G~y 112 (264)
+.+|-.=++.+.+++.. +--++++.|++..||-
T Consensus 111 -----~~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GKS 158 (314)
T 1ko7_A 111 -----KIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGKS 158 (314)
T ss_dssp -----CSCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSHH
T ss_pred -----CCchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCHH
Confidence 34555445677777775 2258999999999994
No 38
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=78.07 E-value=2.7 Score=35.97 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccc
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALML 103 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~l 103 (264)
..+++.|+++|+|++.-+ ..|+. +..+...|+|.+.+
T Consensus 100 ~~v~~~ar~~g~~~i~Gv---------~t~~e-----~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 PKIVKLCQDLNFPITPGV---------NNPMA-----IEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHHHHTTCCEECEE---------CSHHH-----HHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhCCCEEecc---------CCHHH-----HHHHHHCCCCEEEE
Confidence 467889999999997631 13433 36788999999988
No 39
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=77.74 E-value=2.2 Score=36.97 Aligned_cols=73 Identities=14% Similarity=0.246 Sum_probs=49.2
Q ss_pred cCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHH-------------HHHHHHHHHhCCCEEEEhhhhhhhhhCC
Q 024709 14 ESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQ-------------EKIVQLCRQLNKPVIVASQLLESMIEYP 80 (264)
Q Consensus 14 E~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~q-------------k~ii~~~~~~gkpv~~atq~leSM~~~~ 80 (264)
-++.+++.|.+|.+..+.+.||-|-. +..+.+..+. ..+++.|+++|.|++--. .
T Consensus 68 ~t~~a~e~I~~l~~~~~~~~iGaGTV---lt~~~a~~Ai~AGA~fIvsP~~~~~vi~~~~~~gi~~ipGv---------~ 135 (232)
T 4e38_A 68 RSDAAVEAIRLLRQAQPEMLIGAGTI---LNGEQALAAKEAGATFVVSPGFNPNTVRACQEIGIDIVPGV---------N 135 (232)
T ss_dssp TSTTHHHHHHHHHHHCTTCEEEEECC---CSHHHHHHHHHHTCSEEECSSCCHHHHHHHHHHTCEEECEE---------C
T ss_pred CCCCHHHHHHHHHHhCCCCEEeECCc---CCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCCEEcCC---------C
Confidence 36778888888888766677776632 2223332222 578999999999985311 1
Q ss_pred CCChHHHHHHHHHHHhccccccc
Q 024709 81 IPTRAEVADVSELVRQQADALML 103 (264)
Q Consensus 81 ~ptrae~~dv~~~v~~g~d~~~l 103 (264)
.| +++..|...|+|.+-+
T Consensus 136 Tp-----tEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 136 NP-----STVEAALEMGLTTLKF 153 (232)
T ss_dssp SH-----HHHHHHHHTTCCEEEE
T ss_pred CH-----HHHHHHHHcCCCEEEE
Confidence 23 4457899999999977
No 40
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=76.76 E-value=2.9 Score=35.13 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=27.4
Q ss_pred HHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccc
Q 024709 54 KIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALML 103 (264)
Q Consensus 54 ~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~l 103 (264)
.+++.|+++|.|.+.-+ ..|+ ++..+...|+|.+.+
T Consensus 95 ~v~~~~~~~g~~~i~G~---------~t~~-----e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 95 EVAALAQARGVPYLPGV---------LTPT-----EVERALALGLSALKF 130 (207)
T ss_dssp HHHHHHHHHTCCEEEEE---------CSHH-----HHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCEEecC---------CCHH-----HHHHHHHCCCCEEEE
Confidence 68899999999998632 1233 347788899999988
No 41
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=76.47 E-value=8.6 Score=35.31 Aligned_cols=81 Identities=15% Similarity=0.245 Sum_probs=54.6
Q ss_pred ceEEEeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChH
Q 024709 7 IAVIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRA 85 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptra 85 (264)
+.+++-.=..++ +|.+.+. +|.+=||.+|+ ..++ +++++-+.||||++.|.| -|..
T Consensus 92 i~~~st~fD~~s---vd~l~~~~v~~~KI~S~~~------~N~p-----LL~~va~~gKPviLstGm---------stl~ 148 (350)
T 3g8r_A 92 FKAICTPFDEES---VDLIEAHGIEIIKIASCSF------TDWP-----LLERIARSDKPVVASTAG---------ARRE 148 (350)
T ss_dssp CEEEEEECSHHH---HHHHHHTTCCEEEECSSST------TCHH-----HHHHHHTSCSCEEEECTT---------CCHH
T ss_pred CcEEeccCCHHH---HHHHHHcCCCEEEECcccc------cCHH-----HHHHHHhhCCcEEEECCC---------CCHH
Confidence 334443333444 4444556 89999998887 3444 566777899999998864 3788
Q ss_pred HHHHHHHHHHh-ccccccccccccCCCCh
Q 024709 86 EVADVSELVRQ-QADALMLSGESAMGQFP 113 (264)
Q Consensus 86 e~~dv~~~v~~-g~d~~~ls~eta~G~yP 113 (264)
|+...++.+.. |.+.++|-.++. ||
T Consensus 149 Ei~~Ave~i~~~g~~viLlhC~s~---YP 174 (350)
T 3g8r_A 149 DIDKVVSFMLHRGKDLTIMHCVAE---YP 174 (350)
T ss_dssp HHHHHHHHHHTTTCCEEEEECCCC---SS
T ss_pred HHHHHHHHHHHcCCCEEEEecCCC---CC
Confidence 99888887765 677666654543 66
No 42
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=76.47 E-value=4.2 Score=34.76 Aligned_cols=43 Identities=16% Similarity=0.233 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHH
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKAL 117 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav 117 (264)
..+++.|+++|.|.+.-+ ..|+ ++..|...|+|.+.+ ||.+.+
T Consensus 109 ~~v~~~~~~~g~~~i~G~---------~t~~-----e~~~A~~~Gad~vk~--------FPa~~~ 151 (225)
T 1mxs_A 109 EDILEAGVDSEIPLLPGI---------STPS-----EIMMGYALGYRRFKL--------FPAEIS 151 (225)
T ss_dssp HHHHHHHHHCSSCEECEE---------CSHH-----HHHHHHTTTCCEEEE--------TTHHHH
T ss_pred HHHHHHHHHhCCCEEEee---------CCHH-----HHHHHHHCCCCEEEE--------ccCccc
Confidence 478899999999988521 2333 347888999999988 885543
No 43
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=73.69 E-value=7.1 Score=37.26 Aligned_cols=82 Identities=16% Similarity=0.234 Sum_probs=53.2
Q ss_pred ceEEE-eccCHHHHhcHHHHHhh-cceeeecCCCcccC-------CCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 7 IAVIA-KIESIDSLKNLNEIILA-SDGAMVARGDLGAQ-------VPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 7 ~~iia-kIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~-------~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
+.|++ .+-+.+.... ..+. +|+|.++=|+=+.. .+.+ -..+..++.+.|++.++|+|.+.-+-
T Consensus 273 ~~Vi~g~v~t~e~a~~---l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~GGI~---- 344 (496)
T 4fxs_A 273 LEIIGGNVATAEGARA---LIEAGVSAVKVGIGPGSICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIADGGIR---- 344 (496)
T ss_dssp CCEEEEEECSHHHHHH---HHHHTCSEEEECSSCCTTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC----
T ss_pred ceEEEcccCcHHHHHH---HHHhCCCEEEECCCCCcCcccccccCCCcc-HHHHHHHHHHHhccCCCeEEEeCCCC----
Confidence 44555 3667665433 4445 99999863322111 1222 34555788888888999999865322
Q ss_pred hCCCCChHHHHHHHHHHHhcccccccc
Q 024709 78 EYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 78 ~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
-..|++.++..|+|+||+.
T Consensus 345 --------~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 345 --------FSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp --------SHHHHHHHHHTTCSEEEES
T ss_pred --------CHHHHHHHHHcCCCeEEec
Confidence 2357889999999999996
No 44
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=73.01 E-value=5.9 Score=38.00 Aligned_cols=83 Identities=20% Similarity=0.240 Sum_probs=52.5
Q ss_pred ceEEE-eccCHHHHhcHHHHHhh-cceeeecCCCccc-------CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 7 IAVIA-KIESIDSLKNLNEIILA-SDGAMVARGDLGA-------QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 7 ~~iia-kIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~-------~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
+.|++ .+-+.+.... ..+. +|+|.+|-|-=+. ..+.+. ..+...+.+.|++.+.|+|.+..+-
T Consensus 298 ~~vi~g~v~t~e~a~~---~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~GGI~---- 369 (511)
T 3usb_A 298 LNIIAGNVATAEATKA---LIEAGANVVKVGIGPGSICTTRVVAGVGVPQ-LTAVYDCATEARKHGIPVIADGGIK---- 369 (511)
T ss_dssp SEEEEEEECSHHHHHH---HHHHTCSEEEECSSCSTTCCHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCC----
T ss_pred ceEEeeeeccHHHHHH---HHHhCCCEEEECCCCccccccccccCCCCCc-HHHHHHHHHHHHhCCCcEEEeCCCC----
Confidence 34444 5555555333 3344 8999986543211 122222 3455677788898999999855322
Q ss_pred hCCCCChHHHHHHHHHHHhccccccccc
Q 024709 78 EYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 78 ~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
-..|++.|+..|||+||+..
T Consensus 370 --------~~~di~kala~GA~~V~vGs 389 (511)
T 3usb_A 370 --------YSGDMVKALAAGAHVVMLGS 389 (511)
T ss_dssp --------SHHHHHHHHHTTCSEEEEST
T ss_pred --------CHHHHHHHHHhCchhheecH
Confidence 24688999999999999963
No 45
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=69.77 E-value=25 Score=30.43 Aligned_cols=93 Identities=17% Similarity=0.140 Sum_probs=57.6
Q ss_pred cHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccc
Q 024709 21 NLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQAD 99 (264)
Q Consensus 21 n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d 99 (264)
.+..+.+. +|.|+.-.|+.|..-+... +...+++.+ ....|+++.. ..-+. .|+..++..|+|
T Consensus 139 ~a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~~---~~~iPviv~g---------GI~t~---eda~~~~~~GAd 202 (264)
T 1xm3_A 139 LARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFIIE---QAKVPVIVDA---------GIGSP---KDAAYAMELGAD 202 (264)
T ss_dssp HHHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEES---------CCCSH---HHHHHHHHTTCS
T ss_pred HHHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHHh---cCCCCEEEEe---------CCCCH---HHHHHHHHcCCC
Confidence 34455555 7777443444454433323 333333332 3478999843 22222 356788889999
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHHHh
Q 024709 100 ALMLSGESAMGQFPDKALAVLRSVSLRIEK 129 (264)
Q Consensus 100 ~~~ls~eta~G~yP~eav~~m~~i~~~~E~ 129 (264)
++...+--.....|.++++.+.+.+++...
T Consensus 203 gViVGSAi~~a~dp~~~~~~l~~~v~~~~~ 232 (264)
T 1xm3_A 203 GVLLNTAVSGADDPVKMARAMKLAVEAGRL 232 (264)
T ss_dssp EEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999987555556799999988887776554
No 46
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=68.90 E-value=10 Score=32.96 Aligned_cols=93 Identities=11% Similarity=0.102 Sum_probs=60.7
Q ss_pred HHhcHHHHHhhcceeeec---CCCcccCCCCCChHHHHHHHHHHHHHhC--CCEEEEhhhhhhhhhCCCCChHHHHHHHH
Q 024709 18 SLKNLNEIILASDGAMVA---RGDLGAQVPLEQVPSIQEKIVQLCRQLN--KPVIVASQLLESMIEYPIPTRAEVADVSE 92 (264)
Q Consensus 18 ~~~n~~eI~~~~Dgi~i~---rgdL~~~~~~~~v~~~qk~ii~~~~~~g--kpv~~atq~leSM~~~~~ptrae~~dv~~ 92 (264)
.++.+++++...|.|++- || +|..-=.+....-.+++-+.+.+.| .++-+.. .-.|..+ ..
T Consensus 146 p~e~l~~~l~~vD~VlvMsV~PG-fgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDG--------GI~~~ti-----~~ 211 (246)
T 3inp_A 146 GIDCLKYVESNIDRVLIMSVNPG-FGGQKFIPAMLDKAKEISKWISSTDRDILLEIDG--------GVNPYNI-----AE 211 (246)
T ss_dssp CSGGGTTTGGGCSEEEEECSCTT-C--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEES--------SCCTTTH-----HH
T ss_pred CHHHHHHHHhcCCEEEEeeecCC-CCCcccchHHHHHHHHHHHHHHhcCCCeeEEEEC--------CcCHHHH-----HH
Confidence 457788888889998863 34 2322122555555666766776666 4444432 2244444 67
Q ss_pred HHHhccccccccccccCCCChHHHHHHHHHHH
Q 024709 93 LVRQQADALMLSGESAMGQFPDKALAVLRSVS 124 (264)
Q Consensus 93 ~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~ 124 (264)
++..|+|.+...+--.....|.++++.+++.+
T Consensus 212 ~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i 243 (246)
T 3inp_A 212 IAVCGVNAFVAGSAIFNSDSYKQTIDKMRDEL 243 (246)
T ss_dssp HHTTTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEehHHhCCCCHHHHHHHHHHHH
Confidence 88999999999865555678999998887654
No 47
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=68.39 E-value=8.6 Score=33.75 Aligned_cols=111 Identities=16% Similarity=0.132 Sum_probs=68.9
Q ss_pred cceEEEeccCHHHHhcHHHHHhh-cceeeecCCCccc---------CCCCCChHHHHHHHHHHHHHhCCCEE--EEhhhh
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA-SDGAMVARGDLGA---------QVPLEQVPSIQEKIVQLCRQLNKPVI--VASQLL 73 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~---------~~~~~~v~~~qk~ii~~~~~~gkpv~--~atq~l 73 (264)
++.+.+-.-+ .+.++..++. .|.|+|. ++. ..+.++.....+++++.|+++|++|- +.+-.
T Consensus 72 ~~~v~~l~~n---~~~i~~a~~~G~~~V~i~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~- 144 (295)
T 1ydn_A 72 GVRYSVLVPN---MKGYEAAAAAHADEIAVF---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV- 144 (295)
T ss_dssp SSEEEEECSS---HHHHHHHHHTTCSEEEEE---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS-
T ss_pred CCEEEEEeCC---HHHHHHHHHCCCCEEEEE---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe-
Confidence 3445444433 3444455555 7888883 222 35667788888999999999999986 32210
Q ss_pred hhhhhCCCCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHHHHHHHH
Q 024709 74 ESMIEYPIPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAVLRSVSL 125 (264)
Q Consensus 74 eSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~ 125 (264)
+-....+-+..++.+++. +...|+|.+.|. +|.=...|.+.-+.++.+..
T Consensus 145 -~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~-Dt~G~~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 145 -ECPYDGPVTPQAVASVTEQLFSLGCHEVSLG-DTIGRGTPDTVAAMLDAVLA 195 (295)
T ss_dssp -EETTTEECCHHHHHHHHHHHHHHTCSEEEEE-ETTSCCCHHHHHHHHHHHHT
T ss_pred -cCCcCCCCCHHHHHHHHHHHHhcCCCEEEec-CCCCCcCHHHHHHHHHHHHH
Confidence 000011233445555554 456899999998 56655779888887777643
No 48
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=68.24 E-value=10 Score=33.82 Aligned_cols=88 Identities=17% Similarity=0.180 Sum_probs=48.2
Q ss_pred cceEEEeccCHHHHhcHHHHHh----h-cceeeecCCCcccC----------CC-C--CChHHHHHHHHHHHHH-h--CC
Q 024709 6 NIAVIAKIESIDSLKNLNEIIL----A-SDGAMVARGDLGAQ----------VP-L--EQVPSIQEKIVQLCRQ-L--NK 64 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~----~-~Dgi~i~rgdL~~~----------~~-~--~~v~~~qk~ii~~~~~-~--gk 64 (264)
+..|+.|+=.-...+++.++++ . +|+|.+.-+-.+.+ .+ + +.+....-..++..++ . +.
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~i 290 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRL 290 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSS
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCC
Confidence 5788889743211223333333 3 89999853211111 10 0 1122233344555444 4 78
Q ss_pred CEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccc
Q 024709 65 PVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 65 pv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
|||....+- ...|+..++..|+|+|++..
T Consensus 291 pVi~~GGI~------------~~~da~~~l~~GAd~V~igr 319 (336)
T 1f76_A 291 PIIGVGGID------------SVIAAREKIAAGASLVQIYS 319 (336)
T ss_dssp CEEEESSCC------------SHHHHHHHHHHTCSEEEESH
T ss_pred CEEEECCCC------------CHHHHHHHHHCCCCEEEeeH
Confidence 999865332 23466888899999999973
No 49
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=67.82 E-value=6.5 Score=37.44 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=53.5
Q ss_pred cceEEEe-ccCHHHHhcHHHHHhh-cceeeecCCCccc-------CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhh
Q 024709 6 NIAVIAK-IESIDSLKNLNEIILA-SDGAMVARGDLGA-------QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESM 76 (264)
Q Consensus 6 ~~~iiak-IE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~-------~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM 76 (264)
++.|++. +-+.+.. ....+. +|+|.++-|+=+. ..+.+ -..+.+++.+.|++.++|+|.+.-+-
T Consensus 270 ~~~Vi~g~v~t~e~a---~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~GGI~--- 342 (490)
T 4avf_A 270 DVQVIGGNIATAEAA---KALAEAGADAVKVGIGPGSICTTRIVAGVGVP-QISAIANVAAALEGTGVPLIADGGIR--- 342 (490)
T ss_dssp TSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCSTTCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC---
T ss_pred CceEEEeeeCcHHHH---HHHHHcCCCEEEECCCCCcCCCccccCCCCcc-HHHHHHHHHHHhccCCCcEEEeCCCC---
Confidence 3456665 6666554 334445 9999986333111 12222 23455677777878899999865332
Q ss_pred hhCCCCChHHHHHHHHHHHhccccccccc
Q 024709 77 IEYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 77 ~~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
-..|+..++..|+|+||+..
T Consensus 343 ---------~~~di~kal~~GAd~V~vGs 362 (490)
T 4avf_A 343 ---------FSGDLAKAMVAGAYCVMMGS 362 (490)
T ss_dssp ---------SHHHHHHHHHHTCSEEEECT
T ss_pred ---------CHHHHHHHHHcCCCeeeecH
Confidence 23578899999999999963
No 50
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=67.54 E-value=7.1 Score=32.98 Aligned_cols=37 Identities=8% Similarity=0.072 Sum_probs=28.5
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccc
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALML 103 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~l 103 (264)
..+++.|+++|.|.+.-+ ..|+. +..+...|+|.+.+
T Consensus 99 ~~v~~~~~~~g~~~i~G~---------~t~~e-----~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 EPLLKAATEGTIPLIPGI---------STVSE-----LMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHHHSSSCEEEEE---------SSHHH-----HHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhCCCEEEec---------CCHHH-----HHHHHHCCCCEEEE
Confidence 478899999999998632 13433 47888999999988
No 51
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=67.52 E-value=7.4 Score=34.47 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=60.3
Q ss_pred cCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhC-CCEEEEhhhhhhhhhCCCCChHHHHHHHH
Q 024709 14 ESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLN-KPVIVASQLLESMIEYPIPTRAEVADVSE 92 (264)
Q Consensus 14 E~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~g-kpv~~atq~leSM~~~~~ptrae~~dv~~ 92 (264)
.++.-.+.+++ .-.|.||--....|...|... +...+.+++. ... .|||++.. .-|. +|++.
T Consensus 133 ~D~~~ak~l~~--~G~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~GG---------I~tp---sDAa~ 195 (268)
T 2htm_A 133 PDLVLAKRLAA--LGTATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDAG---------LGLP---SHAAE 195 (268)
T ss_dssp SCHHHHHHHHH--HTCSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEESC---------CCSH---HHHHH
T ss_pred CCHHHHHHHHh--cCCCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeCC---------CCCH---HHHHH
Confidence 34433344444 127888775555566555544 4444444331 124 79998552 2222 47799
Q ss_pred HHHhccccccccccccCCCChHHHHHHHHHHHH
Q 024709 93 LVRQQADALMLSGESAMGQFPDKALAVLRSVSL 125 (264)
Q Consensus 93 ~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~ 125 (264)
++..|+|+|++.+-...++.|..-.+.|..-+.
T Consensus 196 AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 196 VMELGLDAVLVNTAIAEAQDPPAMAEAFRLAVE 228 (268)
T ss_dssp HHHTTCCEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999888899999877777766443
No 52
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=67.51 E-value=13 Score=35.46 Aligned_cols=81 Identities=15% Similarity=0.072 Sum_probs=54.0
Q ss_pred EEEeccCHHHHhcHHHHHhh-cceeeecCCCccc-------CCCCCChHHHHHHHHHHHHHh------CCCEEEEhhhhh
Q 024709 9 VIAKIESIDSLKNLNEIILA-SDGAMVARGDLGA-------QVPLEQVPSIQEKIVQLCRQL------NKPVIVASQLLE 74 (264)
Q Consensus 9 iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~-------~~~~~~v~~~qk~ii~~~~~~------gkpv~~atq~le 74 (264)
++..+.+.+..+.+. +. +|+|.+|.|-=+. ..+.+ -..+..++.+.|+++ +.|+|.+..+.
T Consensus 288 i~G~V~t~~~a~~l~---~aGad~I~Vg~~~g~~~~~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~- 362 (503)
T 1me8_A 288 GAGNIVDGEGFRYLA---DAGADFIKIGIGGGSICITREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV- 362 (503)
T ss_dssp EEEEECSHHHHHHHH---HHTCSEEEECSSCSTTCCSTTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC-
T ss_pred eeccccCHHHHHHHH---HhCCCeEEecccCCcCcccccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC-
Confidence 345677776665543 34 8999887643111 12233 345557788888887 89999866433
Q ss_pred hhhhCCCCChHHHHHHHHHHHhccccccccc
Q 024709 75 SMIEYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 75 SM~~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
--.|++.|+..|||+||+..
T Consensus 363 -----------~~~di~kAlalGA~~V~iG~ 382 (503)
T 1me8_A 363 -----------YDYHMTLALAMGADFIMLGR 382 (503)
T ss_dssp -----------SHHHHHHHHHTTCSEEEESH
T ss_pred -----------CHHHHHHHHHcCCCEEEECc
Confidence 23588999999999999973
No 53
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=67.27 E-value=9.2 Score=35.64 Aligned_cols=83 Identities=22% Similarity=0.342 Sum_probs=51.6
Q ss_pred cceEEE-eccCHHHHhcHHHHHhh-cceeeecC--CCcccC-----CCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhh
Q 024709 6 NIAVIA-KIESIDSLKNLNEIILA-SDGAMVAR--GDLGAQ-----VPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESM 76 (264)
Q Consensus 6 ~~~iia-kIE~~~~~~n~~eI~~~-~Dgi~i~r--gdL~~~-----~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM 76 (264)
.+.|++ .+-|.+.. ..+.+. +|+|.++- |..+.. .+.+ -..+.+++.+.|++.+.|||.+.-+-
T Consensus 184 ~i~Vi~g~V~t~e~A---~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~GGI~--- 256 (400)
T 3ffs_A 184 NIDVIVGNVVTEEAT---KELIENGADGIKVGIGPGSICTTRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIR--- 256 (400)
T ss_dssp CCEEEEEEECSHHHH---HHHHHTTCSEEEECC---------CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC---
T ss_pred CCeEEEeecCCHHHH---HHHHHcCCCEEEEeCCCCcCcccccccccchh-HHHHHHHHHHHHHhcCCCEEecCCCC---
Confidence 466775 56665544 344445 99999963 322110 1112 23455677777777899999865332
Q ss_pred hhCCCCChHHHHHHHHHHHhcccccccc
Q 024709 77 IEYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 77 ~~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
...|++.++..|+|+||+.
T Consensus 257 ---------~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 257 ---------YSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp ---------SHHHHHHHHTTTCSEEEEC
T ss_pred ---------CHHHHHHHHHcCCCEEEEC
Confidence 2458899999999999985
No 54
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=66.97 E-value=11 Score=32.76 Aligned_cols=73 Identities=15% Similarity=0.084 Sum_probs=47.9
Q ss_pred hcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCC---------ChHHHHH
Q 024709 20 KNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIP---------TRAEVAD 89 (264)
Q Consensus 20 ~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~p---------trae~~d 89 (264)
...++.++. +|+|-+ |-+++ +-...++....+++.+.|+++|.|+|+= ..| +..++..
T Consensus 96 ~~ve~Ai~~Ga~~v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~----------~~~~G~~~~~~~s~~~i~~ 163 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVE----------SFPRGGKVVNETAPEIVAY 163 (263)
T ss_dssp SCHHHHHHTTCSEEEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEE----------ECCCSTTCCCTTCHHHHHH
T ss_pred HHHHHHHHCCCCEEEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEE----------eeCCCCccccCCCHHHHHH
Confidence 345666666 787755 33333 2223556667788999999999999862 122 4445554
Q ss_pred H-HHHHHhcccccccc
Q 024709 90 V-SELVRQQADALMLS 104 (264)
Q Consensus 90 v-~~~v~~g~d~~~ls 104 (264)
. .-+...|+|.+=.+
T Consensus 164 a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 164 AARIALELGADAMKIK 179 (263)
T ss_dssp HHHHHHHHTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEc
Confidence 3 44778999998887
No 55
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=66.92 E-value=22 Score=31.34 Aligned_cols=101 Identities=13% Similarity=0.121 Sum_probs=58.7
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHH-HHH
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEV-ADV 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~-~dv 90 (264)
++++++ +-.++. +||+++. | -+.|. ..++-..+.+..++.++.+..||++-+ ...+-.|. .-.
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~-G-ttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ai~la 96 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPV-G-TTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHEAVGLA 96 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECS-S-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-c-cccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHHHHHHH
Confidence 344443 445555 8999884 2 12222 223333344444444433357998854 34444454 444
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 97 ~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 134 (301)
T 3m5v_A 97 KFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVD 134 (301)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 55777899999997554444445677778888876654
No 56
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=65.90 E-value=30 Score=29.39 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=53.6
Q ss_pred CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc---ccCCCChHHHHHHHHHHHHHHHhhhhccccccc
Q 024709 63 NKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE---SAMGQFPDKALAVLRSVSLRIEKWCREGKQHAT 139 (264)
Q Consensus 63 gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e---ta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~ 139 (264)
|.++.++|-. +--....++...+.++..|+.+|+|.+-.--- --.|+| -+..+-+..+...+..+.- ..
T Consensus 52 ~~~v~v~~vi--gFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~-~~v~~ei~~v~~a~~~~~l-----kv 123 (220)
T 1ub3_A 52 HAPFRLVTVV--GFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDL-DYLEAEVRAVREAVPQAVL-----KV 123 (220)
T ss_dssp TCSSEEEEEE--STTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCH-HHHHHHHHHHHHHSTTSEE-----EE
T ss_pred CCCceEEEEe--cCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCH-HHHHHHHHHHHHHHcCCCc-----eE
Confidence 4445555532 22122244555678999999999999844211 113454 3455566666555433210 00
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCch
Q 024709 140 FEPPPISSSVSAGIPGEICNGAAKIANKLKASALFVYTKTGQ 181 (264)
Q Consensus 140 ~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~aIVv~T~sG~ 181 (264)
+. . .. . ..+.--..++++|.+.+|+. +=|.||.
T Consensus 124 Il-e---t~-~--l~~e~i~~a~~ia~eaGADf--VKTsTGf 156 (220)
T 1ub3_A 124 IL-E---TG-Y--FSPEEIARLAEAAIRGGADF--LKTSTGF 156 (220)
T ss_dssp EC-C---GG-G--SCHHHHHHHHHHHHHHTCSE--EECCCSS
T ss_pred EE-e---cC-C--CCHHHHHHHHHHHHHhCCCE--EEeCCCC
Confidence 00 0 00 0 12334566788999999994 4455443
No 57
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=65.52 E-value=14 Score=33.82 Aligned_cols=83 Identities=23% Similarity=0.356 Sum_probs=52.3
Q ss_pred cceEEE-eccCHHHHhcHHHHHhh-cceeeec--CCCccc-----CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhh
Q 024709 6 NIAVIA-KIESIDSLKNLNEIILA-SDGAMVA--RGDLGA-----QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESM 76 (264)
Q Consensus 6 ~~~iia-kIE~~~~~~n~~eI~~~-~Dgi~i~--rgdL~~-----~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM 76 (264)
.+.|++ .+-|.+... ...+. +|+|.++ +|.... ..+.+ -....+++.+.+++.+.|+|.+.-+-
T Consensus 145 ~~~Vivg~v~t~e~A~---~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIA~GGI~--- 217 (361)
T 3khj_A 145 NIDVIVGNVVTEEATK---ELIENGADGIKVGIGPGSICTTRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIR--- 217 (361)
T ss_dssp CCEEEEEEECSHHHHH---HHHHTTCSEEEECSSCCTTCCHHHHTCBCCC-HHHHHHHHHHHHHHHTCCEEEESCCC---
T ss_pred CCcEEEccCCCHHHHH---HHHHcCcCEEEEecCCCcCCCcccccCCCCC-cHHHHHHHHHHHhhcCCeEEEECCCC---
Confidence 355665 666666543 34445 9999995 332210 01122 23455667777778899999855322
Q ss_pred hhCCCCChHHHHHHHHHHHhcccccccc
Q 024709 77 IEYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 77 ~~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
+ ..|++.++..|+|+||+.
T Consensus 218 ------~---~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 218 ------Y---SGDIGKALAVGASSVMIG 236 (361)
T ss_dssp ------S---HHHHHHHHHHTCSEEEES
T ss_pred ------C---HHHHHHHHHcCCCEEEEC
Confidence 2 257889999999999986
No 58
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=63.50 E-value=21 Score=31.78 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=48.0
Q ss_pred cceEEEeccCHHHHhcHHHHHhh-cceeee-cCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA-SDGAMV-ARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT 83 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~-~Dgi~i-~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt 83 (264)
.+.++.++.+.+-... +.+. +|+|.+ ++ +-|...+...-....+++.+ ..+.|++.+..+- +
T Consensus 110 g~~v~~~v~~~~~a~~---~~~~GaD~i~v~g~-~~GG~~g~~~~~~ll~~i~~---~~~iPViaaGGI~---------~ 173 (332)
T 2z6i_A 110 GIIVIPVVPSVALAKR---MEKIGADAVIAEGM-EAGGHIGKLTTMTLVRQVAT---AISIPVIAAGGIA---------D 173 (332)
T ss_dssp TCEEEEEESSHHHHHH---HHHTTCSCEEEECT-TSSEECCSSCHHHHHHHHHH---HCSSCEEEESSCC---------S
T ss_pred CCeEEEEeCCHHHHHH---HHHcCCCEEEEECC-CCCCCCCCccHHHHHHHHHH---hcCCCEEEECCCC---------C
Confidence 4678899988765443 3344 899999 43 22322232222222333322 3579999876432 1
Q ss_pred hHHHHHHHHHHHhcccccccc
Q 024709 84 RAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 84 rae~~dv~~~v~~g~d~~~ls 104 (264)
. .|+..++..|+|+|+++
T Consensus 174 ~---~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 174 G---EGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp H---HHHHHHHHTTCSEEEEC
T ss_pred H---HHHHHHHHcCCCEEEec
Confidence 2 36678888999999886
No 59
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=63.22 E-value=18 Score=32.91 Aligned_cols=83 Identities=22% Similarity=0.193 Sum_probs=50.8
Q ss_pred ceEEEe-ccCHHHHhcHHHHHhh-cceeeecCCCcccC-------CCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 7 IAVIAK-IESIDSLKNLNEIILA-SDGAMVARGDLGAQ-------VPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 7 ~~iiak-IE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~-------~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
+.|+++ +-|.+- .....+. +|+|.++-|-=+.+ .+.+ -...-..+.+.|+..+.|+|.+..+.
T Consensus 162 ~~vi~g~v~t~e~---A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~---- 233 (351)
T 2c6q_A 162 HTIMAGNVVTGEM---VEELILSGADIIKVGIGPGSVCTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGGCS---- 233 (351)
T ss_dssp SEEEEEEECSHHH---HHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESCCC----
T ss_pred CeEEEEeCCCHHH---HHHHHHhCCCEEEECCCCCcCcCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCCCC----
Confidence 455543 555432 3333445 89998864321011 1112 23344667777888899999866433
Q ss_pred hCCCCChHHHHHHHHHHHhccccccccc
Q 024709 78 EYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 78 ~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
.-.|++.|+..|||+|++..
T Consensus 234 --------~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 234 --------CPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp --------SHHHHHHHHHTTCSEEEEST
T ss_pred --------CHHHHHHHHHcCCCceeccH
Confidence 23688999999999998864
No 60
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=63.19 E-value=3.2 Score=38.36 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=30.5
Q ss_pred HhcCCcEEEEEcCCchHHHHHhh----cCCCCcEEEEcC
Q 024709 166 NKLKASALFVYTKTGQMASLLSR----SRPDCPIFAFAP 200 (264)
Q Consensus 166 ~~l~A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~ 200 (264)
.+..++.+||-|.||+||-.+|- ..|.++.+.+||
T Consensus 243 ~~~~aDGlIVSTPTGSTAYslSAGGPIv~P~~~~i~ltP 281 (365)
T 3pfn_A 243 TTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITP 281 (365)
T ss_dssp EEECSSEEEEECGGGGGTHHHHTTCCEECTTSCCEEEEE
T ss_pred EEEecCeEEEeCCccHHHHHHhCCCCccCCCCCeEEEEe
Confidence 45689999999999999999996 478888888886
No 61
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=61.70 E-value=11 Score=30.92 Aligned_cols=91 Identities=12% Similarity=0.064 Sum_probs=56.8
Q ss_pred HhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhc
Q 024709 19 LKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQ 97 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g 97 (264)
.+.++.+.+. +|.|.+.+|-=|...+... ....+++.+.+ -+.|+++...+ .| .++..+...|
T Consensus 117 ~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~-~~~i~~l~~~~--~~~~i~~~gGI--------~~-----~~~~~~~~~G 180 (211)
T 3f4w_A 117 PARVRLLEEAGADMLAVHTGTDQQAAGRKP-IDDLITMLKVR--RKARIAVAGGI--------SS-----QTVKDYALLG 180 (211)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHHTTCCS-HHHHHHHHHHC--SSCEEEEESSC--------CT-----TTHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEcCCCcccccCCCC-HHHHHHHHHHc--CCCcEEEECCC--------CH-----HHHHHHHHcC
Confidence 4567777777 8998887663333333222 22223332221 15787764321 22 3557788889
Q ss_pred cccccccccccCCCChHHHHHHHHHHHH
Q 024709 98 ADALMLSGESAMGQFPDKALAVLRSVSL 125 (264)
Q Consensus 98 ~d~~~ls~eta~G~yP~eav~~m~~i~~ 125 (264)
+|++....--..+..|.++++.+.+.++
T Consensus 181 ad~vvvGsai~~~~d~~~~~~~l~~~~~ 208 (211)
T 3f4w_A 181 PDVVIVGSAITHAADPAGEARKISQVLL 208 (211)
T ss_dssp CSEEEECHHHHTCSSHHHHHHHHHHHHH
T ss_pred CCEEEECHHHcCCCCHHHHHHHHHHHHh
Confidence 9999998776678889999988876543
No 62
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=61.51 E-value=83 Score=27.49 Aligned_cols=126 Identities=8% Similarity=0.036 Sum_probs=74.8
Q ss_pred HHHHHHHHHhccccccccccc-------cCCCChHHHHHHHHHHHHHHHhhhhccccc-c-cCCCCCCCCCCCCCchHHH
Q 024709 87 VADVSELVRQQADALMLSGES-------AMGQFPDKALAVLRSVSLRIEKWCREGKQH-A-TFEPPPISSSVSAGIPGEI 157 (264)
Q Consensus 87 ~~dv~~~v~~g~d~~~ls~et-------a~G~yP~eav~~m~~i~~~~E~~~~~~~~~-~-~~~~~~~~~~~~~~~~~aI 157 (264)
..|+-.++..|+|.|++..-+ ..+.-+.|.++.+.++++.+-+.-..-..+ . .+..+. ........
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~-----~~~~~~~~ 160 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPY-----DGDVDPRQ 160 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTT-----TBCCCHHH
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCc-----CCCCCHHH
Confidence 357888999999999984332 345667888888888888776531110000 0 011110 01122345
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCch-----HHHHHhhcC---CCCcEEEEcCChh---hhhhc-ccccccEEE
Q 024709 158 CNGAAKIANKLKASALFVYTKTGQ-----MASLLSRSR---PDCPIFAFAPMSS---VRRRL-NLQWGLVPF 217 (264)
Q Consensus 158 A~aAv~lA~~l~A~aIVv~T~sG~-----tA~~iSr~R---P~~PIiAvT~~~~---~aR~L-~L~~GV~P~ 217 (264)
+...++.+.+.+++.|.+.++.|. ...++...| |..|+-.-++|-. ++..+ .+..|+.=+
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~v 232 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVF 232 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEE
Confidence 566667777899999988888886 355666555 4567777765543 23222 344555544
No 63
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=61.07 E-value=46 Score=29.33 Aligned_cols=101 Identities=16% Similarity=0.089 Sum_probs=59.3
Q ss_pred HHHHhc-HHHHHhh-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHH-H
Q 024709 16 IDSLKN-LNEIILA-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVA-D 89 (264)
Q Consensus 16 ~~~~~n-~~eI~~~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~-d 89 (264)
.+++++ ++-.++. +|||++. |= +.|. ..++-..+.+..++.++. ..||++-+ ...+-.|.- -
T Consensus 31 ~~~l~~lv~~li~~Gv~Gl~v~-Gt-TGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~l 98 (303)
T 2wkj_A 31 KASLRRLVQFNIQQGIDGLYVG-GS-TGEAFVQSLSEREQVLEIVAEEAKG-KIKLIAHV---------GCVSTAESQQL 98 (303)
T ss_dssp HHHHHHHHHHHHHTTCSEEEES-ST-TTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEEEC---------CCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-ee-ccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHH
Confidence 345544 3555555 8999884 21 2233 234434444444444432 47888754 344444543 3
Q ss_pred HHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 90 VSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 90 v~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
...|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 99 a~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 99 AASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 444667799999997654444456677788888887765
No 64
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=60.77 E-value=73 Score=28.25 Aligned_cols=120 Identities=14% Similarity=0.195 Sum_probs=70.1
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|.......+...-..|++.+...+ .| -++.+...++.++ +.+
T Consensus 101 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~~~~~a~~l~~~-~~~-- 160 (342)
T 2gn0_A 101 QGVSLSCAMLGIDGKVV-----------MPKGAPKSKVAATCDYSAEVVLHGD-----NF-NDTIAKVSEIVET-EGR-- 160 (342)
T ss_dssp HHHHHHHHHHTCCEEEE-----------ECTTSCHHHHHHHHHHSCEEEECCS-----SH-HHHHHHHHHHHHH-HCC--
T ss_pred HHHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHh-cCC--
Confidence 35667888999999873 2222222344556668998775442 23 4565554444332 111
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCCh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK-ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMS 202 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~-A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~ 202 (264)
++..+... +. ....-..-+.++.++++ .+.||+.+-+|.+.--+++ ..|...|+++.+..
T Consensus 161 -------~~~~~~~n--~~-~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~ 225 (342)
T 2gn0_A 161 -------IFIPPYDD--PK-VIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAEN 225 (342)
T ss_dssp -------EECCSSSS--HH-HHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETT
T ss_pred -------EEeCCCCC--HH-HHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 11111110 11 11222334667777774 7899999999998765554 57999999998864
No 65
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=59.85 E-value=33 Score=31.29 Aligned_cols=82 Identities=16% Similarity=0.338 Sum_probs=55.1
Q ss_pred ceEEEeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChH
Q 024709 7 IAVIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRA 85 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptra 85 (264)
+.+++-+=+.++++-++ +. +|.+=||-+|+ ..++ +++++-+.||||++.|.| -|..
T Consensus 105 i~~~st~~d~~svd~l~---~~~v~~~KI~S~~~------~n~~-----LL~~va~~gkPviLstGm---------at~~ 161 (349)
T 2wqp_A 105 MIFISTLFSRAAALRLQ---RMDIPAYKIGSGEC------NNYP-----LIKLVASFGKPIILSTGM---------NSIE 161 (349)
T ss_dssp CEEEEEECSHHHHHHHH---HHTCSCEEECGGGT------TCHH-----HHHHHHTTCSCEEEECTT---------CCHH
T ss_pred CeEEEeeCCHHHHHHHH---hcCCCEEEECcccc------cCHH-----HHHHHHhcCCeEEEECCC---------CCHH
Confidence 44555444555554444 44 79999998887 3333 467777889999998854 3778
Q ss_pred HHHHHHHHHH-hccccccccccccCCCChH
Q 024709 86 EVADVSELVR-QQADALMLSGESAMGQFPD 114 (264)
Q Consensus 86 e~~dv~~~v~-~g~d~~~ls~eta~G~yP~ 114 (264)
|+...++.+. .|.+.++|- -+-.||.
T Consensus 162 Ei~~Ave~i~~~G~~iiLlh---c~s~Yp~ 188 (349)
T 2wqp_A 162 SIKKSVEIIREAGVPYALLH---CTNIYPT 188 (349)
T ss_dssp HHHHHHHHHHHHTCCEEEEE---CCCCSSC
T ss_pred HHHHHHHHHHHcCCCEEEEe---ccCCCCC
Confidence 9888888776 466777773 2445775
No 66
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=59.66 E-value=22 Score=32.56 Aligned_cols=84 Identities=18% Similarity=0.297 Sum_probs=51.5
Q ss_pred cceEEE-eccCHHHHhcHHHHHhh-cceeeec--CCCccc-----CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhh
Q 024709 6 NIAVIA-KIESIDSLKNLNEIILA-SDGAMVA--RGDLGA-----QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESM 76 (264)
Q Consensus 6 ~~~iia-kIE~~~~~~n~~eI~~~-~Dgi~i~--rgdL~~-----~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM 76 (264)
++.|++ .+-|.+....+ .+. +|+|.+| +|--.. ..+.+. ....+++.+.|+..++|+|.+.-+-
T Consensus 149 ~v~Vi~G~v~t~e~A~~a---~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~-~~~l~~v~~~~~~~~iPVIA~GGI~--- 221 (366)
T 4fo4_A 149 HLEIIGGNVATAEGARAL---IEAGVSAVKVGIGPGSICTTRIVTGVGVPQ-ITAIADAAGVANEYGIPVIADGGIR--- 221 (366)
T ss_dssp TCEEEEEEECSHHHHHHH---HHHTCSEEEECSSCSTTBCHHHHHCCCCCH-HHHHHHHHHHHGGGTCCEEEESCCC---
T ss_pred CCceEeeeeCCHHHHHHH---HHcCCCEEEEecCCCCCCCcccccCcccch-HHHHHHHHHHHhhcCCeEEEeCCCC---
Confidence 345554 46666655443 334 8999995 332110 112222 3344556777778899999855322
Q ss_pred hhCCCCChHHHHHHHHHHHhccccccccc
Q 024709 77 IEYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 77 ~~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
...|++.++..|+|+||+.+
T Consensus 222 ---------~~~di~kala~GAd~V~vGs 241 (366)
T 4fo4_A 222 ---------FSGDISKAIAAGASCVMVGS 241 (366)
T ss_dssp ---------SHHHHHHHHHTTCSEEEEST
T ss_pred ---------CHHHHHHHHHcCCCEEEECh
Confidence 23578899999999999863
No 67
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=59.13 E-value=50 Score=28.63 Aligned_cols=123 Identities=15% Similarity=0.134 Sum_probs=70.9
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|.......+...-..|++.+...++. .| -++.+...++..+ +.+
T Consensus 75 ~a~A~~a~~~G~~~~i~-----------~p~~~~~~k~~~~~~~Ga~V~~~~~~~---~~-~~~~~~a~~l~~~-~~~-- 136 (304)
T 1ve1_A 75 IGLAMIAASRGYRLILT-----------MPAQMSEERKRVLKAFGAELVLTDPER---RM-LAAREEALRLKEE-LGA-- 136 (304)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTCCHHHHHHHHHTTCEEEEECTTT---HH-HHHHHHHHHHHHH-HTC--
T ss_pred HHHHHHHHHcCCcEEEE-----------eCCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHhc-CCC--
Confidence 35677889999998873 122111233445566799987765431 13 3555554444333 111
Q ss_pred cccccccCCCCCCCCCCCCCchHH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGE-ICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~a-IA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
++..+. .. +. .... ....+.++.++++ .+.||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 137 -------~~~~~~-~n-~~-~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 204 (304)
T 1ve1_A 137 -------FMPDQF-KN-PA-NVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARS 204 (304)
T ss_dssp -------BCCCTT-TC-HH-HHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGG
T ss_pred -------EeCCCC-CC-hh-HHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 111111 10 11 1111 1233567777775 6899999999998766554 469999999988654
No 68
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=58.89 E-value=11 Score=32.72 Aligned_cols=45 Identities=22% Similarity=0.367 Sum_probs=34.7
Q ss_pred HhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 19 LKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 19 ~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
++.++++++-+|.+.|++|=+ .++.....+.+++.+++.|+|+++
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVl 91 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEE
Confidence 456778888899999987744 334445667788889999999997
No 69
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=58.74 E-value=33 Score=30.49 Aligned_cols=154 Identities=14% Similarity=0.113 Sum_probs=82.1
Q ss_pred HHhcHHHHHh----hcceeeecCCCcccCCCCCChHHHHHHHHHHHH--HhCCCEEEEhhhhhhhhhCCCCChHH-HHHH
Q 024709 18 SLKNLNEIIL----ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCR--QLNKPVIVASQLLESMIEYPIPTRAE-VADV 90 (264)
Q Consensus 18 ~~~n~~eI~~----~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~--~~gkpv~~atq~leSM~~~~~ptrae-~~dv 90 (264)
+++++++.+. -+|+|++-+|=+ +.+. ..++|.|+-..-=+|+. +.|.+.. ...+
T Consensus 71 gl~~~~~~i~~l~~g~dav~~~~G~~-----------------~~~~~~~~~~~lil~l~~~t~~~--~~~~~~~l~~~v 131 (295)
T 3glc_A 71 GLERIDINIAPLFEHADVLMCTRGIL-----------------RSVVPPATNRPVVLRASGANSIL--AELSNEAVALSM 131 (295)
T ss_dssp TCTTHHHHTGGGGGGCSEEEECHHHH-----------------HHHSCGGGCCCEEEECEECCCTT--SCTTCCEECSCH
T ss_pred chhhhHHHHHHhhcCCCEEEECHhHH-----------------hhhccccCCccEEEEEcCCCcCC--CCCccchhHHHH
Confidence 4555554443 278888765533 2222 23688887433222221 2233322 3578
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcCC
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLKA 170 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A 170 (264)
..|+..|+|+|-+..-.. ..+..+.++.+.++..+++++-. .--.+. . ....... ...+...++++|.+++|
T Consensus 132 e~Av~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~Gl-pvIie~---~-~G~~~~~--d~e~i~~aariA~elGA 203 (295)
T 3glc_A 132 DDAVRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVGM-PTMAVT---G-VGKDMVR--DQRYFSLATRIAAEMGA 203 (295)
T ss_dssp HHHHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTTC-CEEEEE---C-C----CC--SHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcCC-EEEEEC---C-CCCccCC--CHHHHHHHHHHHHHhCC
Confidence 889999999988753322 33455677778888888776410 000000 0 0000111 12334457789999999
Q ss_pred cEEEEEcCCchHHHHHhhcCCCCcEEEEcC
Q 024709 171 SALFVYTKTGQMASLLSRSRPDCPIFAFAP 200 (264)
Q Consensus 171 ~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~ 200 (264)
+.|-+ +-+|.+-+.+...- .+||++.--
T Consensus 204 D~VKt-~~t~e~~~~vv~~~-~vPVv~~GG 231 (295)
T 3glc_A 204 QIIKT-YYVEKGFERIVAGC-PVPIVIAGG 231 (295)
T ss_dssp SEEEE-ECCTTTHHHHHHTC-SSCEEEECC
T ss_pred CEEEe-CCCHHHHHHHHHhC-CCcEEEEEC
Confidence 95444 44454444444322 378887654
No 70
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=58.72 E-value=26 Score=32.08 Aligned_cols=79 Identities=11% Similarity=0.207 Sum_probs=48.6
Q ss_pred cceEEEe-ccCHHHHhcHHHHHhh-cceeeecCCC--ccc-----CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhh
Q 024709 6 NIAVIAK-IESIDSLKNLNEIILA-SDGAMVARGD--LGA-----QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESM 76 (264)
Q Consensus 6 ~~~iiak-IE~~~~~~n~~eI~~~-~Dgi~i~rgd--L~~-----~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM 76 (264)
.+.|+++ +-|.+... ...+. +|+|.++-|- -.. ..+.+ |-..+..|.+..+|||....+-
T Consensus 141 ~~~Vi~G~V~T~e~A~---~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p-----~l~aI~~~~~~~~PVIAdGGI~--- 209 (361)
T 3r2g_A 141 SRCIMAGNVATYAGAD---YLASCGADIIKAGIGGGSVCSTRIKTGFGVP-----MLTCIQDCSRADRSIVADGGIK--- 209 (361)
T ss_dssp TCEEEEEEECSHHHHH---HHHHTTCSEEEECCSSSSCHHHHHHHCCCCC-----HHHHHHHHTTSSSEEEEESCCC---
T ss_pred CCeEEEcCcCCHHHHH---HHHHcCCCEEEEcCCCCcCccccccCCccHH-----HHHHHHHHHHhCCCEEEECCCC---
Confidence 4678885 77776543 33445 9999995321 100 01222 4455555655555988744321
Q ss_pred hhCCCCChHHHHHHHHHHHhcccccccc
Q 024709 77 IEYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 77 ~~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
.-.|+..++..|+|+||+.
T Consensus 210 ---------~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 210 ---------TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp ---------SHHHHHHHHHTTCSEEEES
T ss_pred ---------CHHHHHHHHHcCCCEEEEC
Confidence 2357899999999999986
No 71
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=58.53 E-value=33 Score=30.40 Aligned_cols=127 Identities=14% Similarity=0.108 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHh
Q 024709 50 SIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEK 129 (264)
Q Consensus 50 ~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~ 129 (264)
..=.-+...|++.|.|+.+- .|..+....+...-..|++.+...++ +.| -++.+...++..+-..
T Consensus 83 N~g~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~---~~~-~~~~~~a~~l~~~~~~ 147 (325)
T 3dwg_A 83 NTGISLAMAARLKGYRLICV-----------MPENTSVERRQLLELYGAQIIFSAAE---GGS-NTAVATAKELAATNPS 147 (325)
T ss_dssp HHHHHHHHHHHHHTCEEEEE-----------EESSSCHHHHHHHHHHTCEEEEECST---TTH-HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCC---CCH-HHHHHHHHHHHHhCCC
Confidence 44567788899999999873 12222223344556789998777532 222 4555544443221110
Q ss_pred hhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCCh
Q 024709 130 WCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK-ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMS 202 (264)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~-A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~ 202 (264)
.++..+. .. +..+..-....+.++.++++ .+.||+.+-+|.+.--+++ ..|...|+++.+..
T Consensus 148 ---------~~~~~~~-~n-p~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (325)
T 3dwg_A 148 ---------WVMLYQY-GN-PANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRY 214 (325)
T ss_dssp ---------SBCCCTT-TC-HHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEEC
T ss_pred ---------eEeCCCC-CC-HHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 1111221 10 11111122344557777764 7899999999998765554 47999999998754
No 72
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=58.13 E-value=69 Score=28.56 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=70.8
Q ss_pred HHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhh
Q 024709 52 QEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWC 131 (264)
Q Consensus 52 qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~ 131 (264)
=.-+...|++.|.|+.+- .|..+....+...-..|++.+...+. .-++.+...+++++-..
T Consensus 88 g~a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~v~~~------~~~~~~~a~~l~~~~~~-- 148 (346)
T 3l6b_A 88 GQALTYAAKLEGIPAYIV-----------VPQTAPDCKKLAIQAYGASIVYCEPS------DESRENVAKRVTEETEG-- 148 (346)
T ss_dssp HHHHHHHHHHTTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECSS------HHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCC------HHHHHHHHHHHHHhcCC--
Confidence 345677899999999873 12222122344556789997766432 34666655555433211
Q ss_pred hcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 132 REGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKL-KASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l-~A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
.| ..+... +. ....-...+.++.+++ +.+.||+.+-+|.+.--+++ .+|.+.|+++-+...
T Consensus 149 ----~~----i~~~~n--p~-~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~ 214 (346)
T 3l6b_A 149 ----IM----VHPNQE--PA-VIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNA 214 (346)
T ss_dssp ----EE----CCSSSC--HH-HHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred ----EE----ECCCCC--hH-HHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 11 111100 11 1122233345666666 46899999999998765543 579999999987653
No 73
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=57.95 E-value=39 Score=31.93 Aligned_cols=84 Identities=21% Similarity=0.290 Sum_probs=53.0
Q ss_pred cceEEEe-ccCHHHHhcHHHHHhh-cceeeecC--CCcccC-----CCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhh
Q 024709 6 NIAVIAK-IESIDSLKNLNEIILA-SDGAMVAR--GDLGAQ-----VPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESM 76 (264)
Q Consensus 6 ~~~iiak-IE~~~~~~n~~eI~~~-~Dgi~i~r--gdL~~~-----~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM 76 (264)
++.|+++ +.+.+....+. +. +|+|.++. |--... .+.+ .+.....+-+.++..+.|+|.+..+-
T Consensus 296 ~~pvi~~~v~t~~~a~~l~---~aGad~I~vg~~~G~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI~--- 368 (514)
T 1jcn_A 296 HLQVIGGNVVTAAQAKNLI---DAGVDGLRVGMGCGSICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGIQ--- 368 (514)
T ss_dssp TCEEEEEEECSHHHHHHHH---HHTCSEEEECSSCSCCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC---
T ss_pred CCceEecccchHHHHHHHH---HcCCCEEEECCCCCcccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCCC---
Confidence 4667774 77766644443 34 99999954 311100 1211 23445566666777899999855322
Q ss_pred hhCCCCChHHHHHHHHHHHhccccccccc
Q 024709 77 IEYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 77 ~~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
...|+..++..|+|+|++..
T Consensus 369 ---------~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 369 ---------TVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp ---------SHHHHHHHHHTTCSEEEEST
T ss_pred ---------CHHHHHHHHHcCCCeeeECH
Confidence 23577899999999999974
No 74
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=57.69 E-value=48 Score=27.60 Aligned_cols=101 Identities=9% Similarity=0.078 Sum_probs=59.3
Q ss_pred eEEEeccCHHHHhcHHHHHh---hcceeeecCCCc---ccCCCCCChHHHHHHHHHHHHHh-CCCEEEEhhhhhhhhhCC
Q 024709 8 AVIAKIESIDSLKNLNEIIL---ASDGAMVARGDL---GAQVPLEQVPSIQEKIVQLCRQL-NKPVIVASQLLESMIEYP 80 (264)
Q Consensus 8 ~iiakIE~~~~~~n~~eI~~---~~Dgi~i~rgdL---~~~~~~~~v~~~qk~ii~~~~~~-gkpv~~atq~leSM~~~~ 80 (264)
.++.-+....-++.+++++. .+|.+.+..-.- |..++.. ...-.+++ .+.. +.|+.++.. -
T Consensus 115 ~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~-~l~~i~~~---~~~~~~~pi~v~GG--------I 182 (228)
T 1h1y_A 115 RPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPE-MMEKVRAL---RKKYPSLDIEVDGG--------L 182 (228)
T ss_dssp EEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGG-GHHHHHHH---HHHCTTSEEEEESS--------C
T ss_pred CEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHH-HHHHHHHH---HHhcCCCCEEEECC--------c
Confidence 34444533334577888888 799998854332 2222222 22222222 2222 788887542 2
Q ss_pred CCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHH
Q 024709 81 IPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSL 125 (264)
Q Consensus 81 ~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~ 125 (264)
.|.. +..++..|+|++...+---....|.++++.+++.+.
T Consensus 183 ~~~n-----i~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~~~~ 222 (228)
T 1h1y_A 183 GPST-----IDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVE 222 (228)
T ss_dssp STTT-----HHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred CHHH-----HHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHHHH
Confidence 3333 245556699999998766566679999999887544
No 75
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=57.47 E-value=67 Score=29.00 Aligned_cols=121 Identities=16% Similarity=0.254 Sum_probs=68.0
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|..+....+...-..|++.+...+ .| -++.+...++..+.+.+
T Consensus 106 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~a~~~a~~l~~~~~~~-- 166 (372)
T 1p5j_A 106 MAAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATCKVVGE-----LL-DEAFELAKALAKNNPGW-- 166 (372)
T ss_dssp HHHHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----CH-HHHHHHHHHHHHHSTTE--
T ss_pred HHHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHhcCCc--
Confidence 34567788899998872 2222222334455567988775432 23 45555444443221111
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cC-CCCcEEEEcCCh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SR-PDCPIFAFAPMS 202 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~R-P~~PIiAvT~~~ 202 (264)
++..+.. . + .....-...+.++.++++ .+.||+.+-+|.++--+++ +. |...|+++.+..
T Consensus 167 -------~~v~~~~-n-~-~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~ 233 (372)
T 1p5j_A 167 -------VYIPPFD-D-P-LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFG 233 (372)
T ss_dssp -------EECCSSC-C-H-HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred -------EEeCCCC-C-H-HHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 1111111 0 1 112222334567777775 5899999999998766553 33 889999998854
No 76
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=57.14 E-value=7.3 Score=33.60 Aligned_cols=168 Identities=8% Similarity=0.100 Sum_probs=82.5
Q ss_pred hcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcc
Q 024709 20 KNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQA 98 (264)
Q Consensus 20 ~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~ 98 (264)
+.++.+++. .|+|||| |-.|+. ..--.++++++++...|++. .|...+ .+..|+
T Consensus 22 ~~~~~~~~~GtD~i~vG-Gs~gvt------~~~~~~~v~~ik~~~~Pvvl------------fp~~~~------~v~~ga 76 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIG-GSDGVT------EDNVLRMMSKVRRFLVPCVL------------EVSAIE------AIVPGF 76 (228)
T ss_dssp THHHHHHTSSCSEEEEC-CCSCCC------HHHHHHHHHHHTTSSSCEEE------------ECSCGG------GCCSCC
T ss_pred HHHHHHHHcCCCEEEEC-CcCCCC------HHHHHHHHHHhhccCCCEEE------------eCCCHH------HccccC
Confidence 456666766 8999998 433332 23344566677778999998 333321 234799
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHHHH------hhhhcccccccCCCCC-----CCC-CCCCCchHHHHHHHHHHHH
Q 024709 99 DALMLSGESAMGQFPDKALAVLRSVSLRIE------KWCREGKQHATFEPPP-----ISS-SVSAGIPGEICNGAAKIAN 166 (264)
Q Consensus 99 d~~~ls~eta~G~yP~eav~~m~~i~~~~E------~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~aIA~aAv~lA~ 166 (264)
|+++.- .--.|..|---+....+-+++.- .... .-|-... +. ... ....+ ...+.+-+..|+
T Consensus 77 D~~l~p-slln~~~~~~i~g~~~~a~~~~g~~~~~~e~i~--~gYivv~-p~s~~~~~~~a~~~~~--~e~~~~~a~~a~ 150 (228)
T 3vzx_A 77 DLYFIP-SVLNSKNADWIVGMHQKAMKEYGELMSMEEIVA--EGYCIAN-PDCKAAALTEADADLN--MDDIVAYARVSE 150 (228)
T ss_dssp SEEEEE-EETTBSSGGGTTHHHHHHHHHHHHHHHHSCEEE--EEEEECC-SSSHHHHHTTBCCCCC--HHHHHHHHHHHH
T ss_pred CEEEEe-eecCCCCcchhhhHHHHHHHHcCCCCcccceee--eEEEEEC-CCCcceeeecccCCCC--HHHHHHHHHHHH
Confidence 998764 22233333222121111122111 1000 0010000 00 000 00112 223355556677
Q ss_pred hcCCcEEEEEcCCchH--HHHHh---hcCCCCcEEEE--cCChhhhhhcccccccEEEEecC
Q 024709 167 KLKASALFVYTKTGQM--ASLLS---RSRPDCPIFAF--APMSSVRRRLNLQWGLVPFCLNF 221 (264)
Q Consensus 167 ~l~A~aIVv~T~sG~t--A~~iS---r~RP~~PIiAv--T~~~~~aR~L~L~~GV~P~~~~~ 221 (264)
-++-+.+-+-. +|.+ ...+. +.-+..|+++- -+++..++++. .|.--+.+..
T Consensus 151 ~~g~~~VYld~-sG~~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~--~gAD~VVVGS 209 (228)
T 3vzx_A 151 LLQLPIFYLEY-SGVLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA--EHADVIVVGN 209 (228)
T ss_dssp HTTCSEEEEEC-TTSCCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH--TTCSEEEECT
T ss_pred HcCCCEEEecC-CCCcCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH--hCCCEEEECh
Confidence 77777665555 6653 33333 33335677764 35666677664 4777777653
No 77
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=56.99 E-value=54 Score=28.71 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=57.3
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHH-HHH
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEV-ADV 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~-~dv 90 (264)
++++++ +-.++. +||+++. | -+.|. ..++-..+.+..++.++ -..||++-+ ...+-.|. .-.
T Consensus 28 ~~l~~lv~~li~~Gv~gl~~~-G-ttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la 95 (297)
T 3flu_A 28 EQLRDLIDWHIENGTDGIVAV-G-TTGESATLSVEEHTAVIEAVVKHVA-KRVPVIAGT---------GANNTVEAIALS 95 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEES-S-TTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeC-c-cccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CCcCHHHHHHHH
Confidence 444443 445555 8999984 2 12232 22333333444444443 236998854 34445554 444
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 96 ~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 133 (297)
T 3flu_A 96 QAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATS 133 (297)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 55777899999997554444445667777777776653
No 78
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=56.78 E-value=19 Score=26.85 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHhhcCCCCcEEEE
Q 024709 157 ICNGAAKIANKLKASALFVYTKT---------GQMASLLSRSRPDCPIFAF 198 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~s---------G~tA~~iSr~RP~~PIiAv 198 (264)
.+....+.|.+.+++.||+-++. |+++..+.+.-| ||++.+
T Consensus 98 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 98 PSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 34556677889999988887753 678888888766 999864
No 79
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=56.68 E-value=46 Score=29.56 Aligned_cols=100 Identities=17% Similarity=0.199 Sum_probs=58.6
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCCC---CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHH-HHH
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQVP---LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEV-ADV 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~---~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~-~dv 90 (264)
++++++ +-.++. +||+++. | -+.|.+ .++-..+.+..++.++. ..||++-+ ...+-.|. .-.
T Consensus 44 ~~l~~lv~~li~~Gv~Gl~v~-G-tTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~eai~la 111 (314)
T 3qze_A 44 DSLAKLVDFHLQEGTNAIVAV-G-TTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGT---------GANSTREAVALT 111 (314)
T ss_dssp HHHHHHHHHHHHHTCCEEEES-S-GGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-c-cccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHH
Confidence 444443 445555 9999984 2 222333 34434444444444432 36999854 34444554 444
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 112 ~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 112 EAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 55777899999997554444445677788888876654
No 80
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=55.79 E-value=66 Score=26.32 Aligned_cols=83 Identities=11% Similarity=0.007 Sum_probs=47.7
Q ss_pred cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccccc
Q 024709 29 SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESA 108 (264)
Q Consensus 29 ~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta 108 (264)
+|.|++++.--+...+-.. +.--+.+-+.++..+.|++.+..+ +. .++..++..|+|++.+++-.-
T Consensus 131 aD~i~~~~~f~~~~~~g~~-~~~~~~l~~~~~~~~~pvia~GGI----------~~---~nv~~~~~~Ga~gv~vgs~i~ 196 (221)
T 1yad_A 131 ADYVLFGHVFETDCKKGLE-GRGVSLLSDIKQRISIPVIAIGGM----------TP---DRLRDVKQAGADGIAVMSGIF 196 (221)
T ss_dssp CSEEEEECCC-----------CHHHHHHHHHHHCCSCEEEESSC----------CG---GGHHHHHHTTCSEEEESHHHH
T ss_pred CCEEEECCccccCCCCCCC-CCCHHHHHHHHHhCCCCEEEECCC----------CH---HHHHHHHHcCCCEEEEhHHhh
Confidence 8999998741111111000 111122333344458999986532 22 355677788999999987655
Q ss_pred CCCChHHHHHHHHHHHH
Q 024709 109 MGQFPDKALAVLRSVSL 125 (264)
Q Consensus 109 ~G~yP~eav~~m~~i~~ 125 (264)
..+.|.++++.+.+.++
T Consensus 197 ~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 197 SSAEPLEAARRYSRKLK 213 (221)
T ss_dssp TSSSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 55668888887766543
No 81
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=55.46 E-value=36 Score=28.83 Aligned_cols=92 Identities=18% Similarity=0.155 Sum_probs=55.6
Q ss_pred HHhcHHHHHhhcceeeec---CCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHH
Q 024709 18 SLKNLNEIILASDGAMVA---RGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSE 92 (264)
Q Consensus 18 ~~~n~~eI~~~~Dgi~i~---rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~ 92 (264)
.++.+++++...|.|++- +|==|..+. +....- +++.++. +.|+.+... -.|..+ ..
T Consensus 124 ~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~-~~~l~k----i~~lr~~~~~~~I~VdGG--------I~~~t~-----~~ 185 (228)
T 3ovp_A 124 SVEYLAPWANQIDMALVMTVEPGFGGQKFM-EDMMPK----VHWLRTQFPSLDIEVDGG--------VGPDTV-----HK 185 (228)
T ss_dssp CGGGTGGGGGGCSEEEEESSCTTTCSCCCC-GGGHHH----HHHHHHHCTTCEEEEESS--------CSTTTH-----HH
T ss_pred CHHHHHHHhccCCeEEEeeecCCCCCcccC-HHHHHH----HHHHHHhcCCCCEEEeCC--------cCHHHH-----HH
Confidence 467788888889988863 221111111 222222 2223333 345555432 234444 67
Q ss_pred HHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 024709 93 LVRQQADALMLSGESAMGQFPDKALAVLRSVSLRI 127 (264)
Q Consensus 93 ~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~ 127 (264)
++..|+|.+...+--.....|.++++.+++.+.++
T Consensus 186 ~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~~ 220 (228)
T 3ovp_A 186 CAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEA 220 (228)
T ss_dssp HHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHHH
Confidence 88899999999866556678999999988766554
No 82
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=55.41 E-value=8.4 Score=33.38 Aligned_cols=60 Identities=18% Similarity=0.249 Sum_probs=0.0
Q ss_pred HhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhc
Q 024709 19 LKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQ 97 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g 97 (264)
.++++++++. .|+|||| |..|+ -..--.++++++++...|++. |..++ +.+..|
T Consensus 26 ~~~l~~~~~~GtDaI~vG-gs~gv------t~~~~~~~v~~ik~~~~Piil-------~p~~~-----------~~~~~g 80 (235)
T 3w01_A 26 DDDLDAICMSQTDAIMIG-GTDDV------TEDNVIHLMSKIRRYPLPLVL-------EISNI-----------ESVMPG 80 (235)
T ss_dssp HHHHHHHHTSSCSEEEEC-CSSCC------CHHHHHHHHHHHTTSCSCEEE-------ECCCS-----------TTCCTT
T ss_pred HHHHHHHHHcCCCEEEEC-CcCCc------CHHHHHHHHHHhcCcCCCEEE-------ecCCH-----------HHhhcC
Q ss_pred cccccc
Q 024709 98 ADALML 103 (264)
Q Consensus 98 ~d~~~l 103 (264)
+|++++
T Consensus 81 aD~il~ 86 (235)
T 3w01_A 81 FDFYFV 86 (235)
T ss_dssp CSEEEE
T ss_pred CCEEEE
No 83
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=55.00 E-value=33 Score=30.51 Aligned_cols=128 Identities=13% Similarity=0.104 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHh
Q 024709 50 SIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEK 129 (264)
Q Consensus 50 ~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~ 129 (264)
..=.-+...|++.|.|+.+- .|..+....+...-..|++.+...++. .| -++++...++..+-+.
T Consensus 82 N~g~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~ 146 (334)
T 3tbh_A 82 NTGVSLAHLGAIRGYKVIIT-----------MPESMSLERRCLLRIFGAEVILTPAAL---GM-KGAVAMAKKIVAANPN 146 (334)
T ss_dssp HHHHHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---Cc-hHHHHHHHHHHHhCCC
Confidence 44566788899999999873 232222233455667899988776441 12 3444443333221101
Q ss_pred hhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 130 WCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKL--KASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l--~A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
. ++..+... +.+...--...+.++.+++ +.+.||+.+-+|.+.--+++ .+|...|+++.+...
T Consensus 147 ------~---~~i~~~~n--p~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~ 215 (334)
T 3tbh_A 147 ------A---VLADQFAT--KYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTES 215 (334)
T ss_dssp ------E---EECCTTTC--HHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTS
T ss_pred ------E---EECCccCC--hhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCc
Confidence 1 11111110 1101111123455777776 46899999999998765553 579999999976543
No 84
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=54.96 E-value=56 Score=28.55 Aligned_cols=101 Identities=12% Similarity=-0.022 Sum_probs=59.1
Q ss_pred HHHHhc-HHHHHh-h-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHH-
Q 024709 16 IDSLKN-LNEIIL-A-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVA- 88 (264)
Q Consensus 16 ~~~~~n-~~eI~~-~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~- 88 (264)
.+++++ ++-.++ . +||+++. | =+.|. ..++-..+.+..++.++. ..||++-+ ...+-.|.-
T Consensus 23 ~~~l~~lv~~li~~~Gv~gl~~~-G-ttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~ 90 (293)
T 1f6k_A 23 EKGLRQIIRHNIDKMKVDGLYVG-G-STGENFMLSTEEKKEIFRIAKDEAKD-QIALIAQV---------GSVNLKEAVE 90 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEES-S-GGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCcEEEeC-c-cccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEec---------CCCCHHHHHH
Confidence 345544 466677 5 8999884 2 22233 334433444444444432 47888754 344444543
Q ss_pred HHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 89 DVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 89 dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
-...|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 91 la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 91 LGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 3444667799999997554444446677777888876654
No 85
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=54.95 E-value=8.5 Score=39.96 Aligned_cols=65 Identities=18% Similarity=0.232 Sum_probs=57.1
Q ss_pred CcceEEEeccCHHHHhcHHHHHhh---cc----------eeeecCCCcccCCCC----CChHHHHHHHHHHHHHhCCCEE
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILA---SD----------GAMVARGDLGAQVPL----EQVPSIQEKIVQLCRQLNKPVI 67 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~---~D----------gi~i~rgdL~~~~~~----~~v~~~qk~ii~~~~~~gkpv~ 67 (264)
..+.|+.=.||.+.++|.++|++. .+ -||+|..|=+-+-|. =.+..+|.++.+.|+++|.++.
T Consensus 557 ~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~ 636 (970)
T 1jqo_A 557 QPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLT 636 (970)
T ss_dssp SCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 357899999999999999999987 22 499999999999886 5789999999999999999987
Q ss_pred EE
Q 024709 68 VA 69 (264)
Q Consensus 68 ~a 69 (264)
.-
T Consensus 637 lF 638 (970)
T 1jqo_A 637 LF 638 (970)
T ss_dssp EE
T ss_pred Ee
Confidence 63
No 86
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=54.93 E-value=62 Score=28.95 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=57.0
Q ss_pred HHHHhc-HHHHHhh-cceeeecCCCc--ccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-H
Q 024709 16 IDSLKN-LNEIILA-SDGAMVARGDL--GAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD-V 90 (264)
Q Consensus 16 ~~~~~n-~~eI~~~-~Dgi~i~rgdL--~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d-v 90 (264)
.+++++ ++-.++. +|||++. |-- +..+..++-..+.+.+++.++. ..||++-+ ...+-.|.-+ .
T Consensus 54 ~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~st~eai~la 122 (332)
T 2r8w_A 54 IEAFSALIARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILRG-RRTLMAGI---------GALRTDEAVALA 122 (332)
T ss_dssp HHHHHHHHHHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEE---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHH
Confidence 344544 3555555 9999884 211 1222233433444444444432 47888754 3444455444 3
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 123 ~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 123 KDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp HHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 44666799999997554444445666777777766543
No 87
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=54.77 E-value=3.9 Score=39.81 Aligned_cols=64 Identities=17% Similarity=0.202 Sum_probs=54.8
Q ss_pred CcceEEEeccCHHHHhcHHHHHhh--c-----------ceeeecCCCcccCCCC----CChHHHHHHHHHHHHHhCCCEE
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILA--S-----------DGAMVARGDLGAQVPL----EQVPSIQEKIVQLCRQLNKPVI 67 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~--~-----------Dgi~i~rgdL~~~~~~----~~v~~~qk~ii~~~~~~gkpv~ 67 (264)
..+.||.=+||.+.+.|.++|+.. . =-||+|+.|=+.+-|. -.+..+|.++.+.|+++|.++-
T Consensus 179 ~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~QeVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~ 258 (560)
T 3odm_A 179 NSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTIS 258 (560)
T ss_dssp TSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEEEEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeEEEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 357899999999999999999887 2 2489999888888776 5788999999999999999876
Q ss_pred E
Q 024709 68 V 68 (264)
Q Consensus 68 ~ 68 (264)
.
T Consensus 259 l 259 (560)
T 3odm_A 259 P 259 (560)
T ss_dssp E
T ss_pred E
Confidence 5
No 88
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=54.75 E-value=29 Score=25.63 Aligned_cols=41 Identities=17% Similarity=0.279 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHhhcCCCCcEEEE
Q 024709 157 ICNGAAKIANKLKASALFVYTKT---------GQMASLLSRSRPDCPIFAF 198 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~s---------G~tA~~iSr~RP~~PIiAv 198 (264)
.+....+.|.+.+++.||+-++. |+++..+.+.- +||++.+
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~-~~pVlvv 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEA-PCPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcC-CCCEEEe
Confidence 44566778899999988888763 66788887775 4999875
No 89
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=54.55 E-value=89 Score=27.20 Aligned_cols=100 Identities=15% Similarity=0.142 Sum_probs=56.6
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-H
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD-V 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d-v 90 (264)
++++++ +-.++. +||+++. |- +.|. ..++-..+.+..++.++. ..||++-+ ...+-.|.-+ .
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~-Gt-tGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la 88 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVC-GT-TGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGT---------GGNATHEAVHLT 88 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEES-ST-TTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEC-cc-ccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHH
Confidence 445443 445555 8999884 21 2232 223333333444444332 47888754 3444555544 4
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 89 ~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 89 AHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 44667899999997554444445666777777766543
No 90
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=54.51 E-value=21 Score=30.79 Aligned_cols=65 Identities=18% Similarity=0.184 Sum_probs=45.5
Q ss_pred ChHHHHHHHHHHHHHhCCCE--EEEhhhhhhhhhCCCCChHHHHHHHH-HHHhccccccccccccCCCCh-----HHHHH
Q 024709 47 QVPSIQEKIVQLCRQLNKPV--IVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGESAMGQFP-----DKALA 118 (264)
Q Consensus 47 ~v~~~qk~ii~~~~~~gkpv--~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP-----~eav~ 118 (264)
.+..-.+.+.+.|+.+|+|+ |+-|- .++..|+...+. +...|+|+|=-| .|..| ++.|+
T Consensus 117 ~v~~ei~~v~~a~~~~g~~lKvIlEt~---------~L~~e~i~~a~ria~eaGADfVKTs----TG~~~~~gAt~~dv~ 183 (234)
T 1n7k_A 117 AVYREVSGIVKLAKSYGAVVKVILEAP---------LWDDKTLSLLVDSSRRAGADIVKTS----TGVYTKGGDPVTVFR 183 (234)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCGG---------GSCHHHHHHHHHHHHHTTCSEEESC----CSSSCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEecc---------CCCHHHHHHHHHHHHHhCCCEEEeC----CCCCCCCCCCHHHHH
Confidence 66667788899999999997 65443 235566655554 667899998655 45554 78888
Q ss_pred H--HHHHH
Q 024709 119 V--LRSVS 124 (264)
Q Consensus 119 ~--m~~i~ 124 (264)
. |++++
T Consensus 184 l~~m~~~v 191 (234)
T 1n7k_A 184 LASLAKPL 191 (234)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHH
Confidence 8 87654
No 91
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=54.43 E-value=22 Score=26.63 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC--------chHHHHHhhcCCCCcEEEEcCCh
Q 024709 157 ICNGAAKIANKLKASALFVYTKT--------GQMASLLSRSRPDCPIFAFAPMS 202 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~s--------G~tA~~iSr~RP~~PIiAvT~~~ 202 (264)
.+....+.|.+.+++.||+-++. |+++..+.+.-| ||++.+-+++
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv~~~~ 149 (150)
T 3tnj_A 97 PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAVRLRD 149 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEEeCCC
Confidence 34566678899999988887753 566777777655 9999886543
No 92
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=54.10 E-value=24 Score=32.67 Aligned_cols=76 Identities=14% Similarity=0.267 Sum_probs=51.0
Q ss_pred ceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHH
Q 024709 7 IAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAE 86 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae 86 (264)
+.+++-+-..+.++-+ .+.+|.+-||-+++. . ..+++.+-+.||||++.|.| ..|..|
T Consensus 207 l~~~te~~d~~~~~~l---~~~vd~lkIgs~~~~------n-----~~LL~~~a~~gkPVilk~G~--------~~t~~e 264 (385)
T 3nvt_A 207 LGVISEIVTPADIEVA---LDYVDVIQIGARNMQ------N-----FELLKAAGRVDKPILLKRGL--------SATIEE 264 (385)
T ss_dssp CEEEEECCSGGGHHHH---TTTCSEEEECGGGTT------C-----HHHHHHHHTSSSCEEEECCT--------TCCHHH
T ss_pred CEEEEecCCHHHHHHH---HhhCCEEEECccccc------C-----HHHHHHHHccCCcEEEecCC--------CCCHHH
Confidence 4455555555444433 445888888877762 2 25677788899999996643 277888
Q ss_pred HHHHHHHHHh-cccccccc
Q 024709 87 VADVSELVRQ-QADALMLS 104 (264)
Q Consensus 87 ~~dv~~~v~~-g~d~~~ls 104 (264)
+...+..+.. |.+=++|.
T Consensus 265 ~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 265 FIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp HHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHHHHcCCCeEEEE
Confidence 8888887764 77656665
No 93
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=53.36 E-value=1.2e+02 Score=29.01 Aligned_cols=119 Identities=15% Similarity=0.130 Sum_probs=69.4
Q ss_pred HHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhc
Q 024709 54 KIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCRE 133 (264)
Q Consensus 54 ~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~ 133 (264)
-+...|++.|.|+.+- -|.-+. ...+...-..|++.+... ...-++.+...+++.+-. +
T Consensus 93 avA~aa~~lGi~~~Iv---------mP~~~p--~~Kv~~~r~~GAeVvlv~------~~~dda~~~a~ela~e~g-~--- 151 (514)
T 1tdj_A 93 GVAFSSARLGVKALIV---------MPTATA--DIKVDAVRGFGGEVLLHG------ANFDEAKAKAIELSQQQG-F--- 151 (514)
T ss_dssp HHHHHHHHTTCCEEEE---------CCSSCC--HHHHHHHHHHSCEEECCC------SSHHHHHHHHHHHHHHHC-C---
T ss_pred HHHHHHHHcCCcEEEE---------ECCCCC--HHHHHHHHHCCCEEEEEC------CCHHHHHHHHHHHHHhcC-C---
Confidence 4667888999999872 122221 234455566899876643 234566655554433211 0
Q ss_pred ccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCCh
Q 024709 134 GKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK-ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMS 202 (264)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~-A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~ 202 (264)
.+..+... +. ....-..-+.++.++++ .++||+.+-+|.++--+++ .+|...||++.+..
T Consensus 152 ------~~v~pfdn--p~-~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~ 216 (514)
T 1tdj_A 152 ------TWVPPFDH--PM-VIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAED 216 (514)
T ss_dssp ------EECCSSCC--HH-HHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred ------EeeCCCCC--HH-HHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence 11111110 11 11222233567777775 6899999999998766654 57999999999853
No 94
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=53.35 E-value=18 Score=31.83 Aligned_cols=45 Identities=16% Similarity=0.253 Sum_probs=35.9
Q ss_pred HhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 19 LKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 19 ~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
.+.++|+++.+|++.|+.|=|. ++-.......++.++++++|+++
T Consensus 49 ~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVl 93 (273)
T 3dzv_A 49 PREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVV 93 (273)
T ss_dssp GGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEE
Confidence 4667888899999999988652 34455667777889999999997
No 95
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=53.05 E-value=83 Score=27.60 Aligned_cols=100 Identities=15% Similarity=0.187 Sum_probs=56.4
Q ss_pred HHHHhcH-HHHHhh-cceeeecCCCcccCCC---CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHH-H
Q 024709 16 IDSLKNL-NEIILA-SDGAMVARGDLGAQVP---LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVA-D 89 (264)
Q Consensus 16 ~~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~---~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~-d 89 (264)
.++++++ +-.++. +|||++. |= +.|.+ .++-..+.+.+++.++. ..||++-+ ...+-.|.- -
T Consensus 32 ~~~l~~lv~~li~~Gv~gl~v~-Gt-TGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~l 99 (301)
T 1xky_A 32 FAKTTKLVNYLIDNGTTAIVVG-GT-TGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGT---------GSNNTHASIDL 99 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEEES-ST-TTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-cc-ccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCC---------CCCCHHHHHHH
Confidence 3455443 555565 8999884 21 22332 23333344444444432 47998755 344445544 3
Q ss_pred HHHHHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 024709 90 VSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRI 127 (264)
Q Consensus 90 v~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~ 127 (264)
...|-..|+|++|+..=--...-+-+.++..+.|+..+
T Consensus 100 a~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (301)
T 1xky_A 100 TKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST 137 (301)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 44466789999999765444444566667777776544
No 96
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=52.97 E-value=31 Score=26.24 Aligned_cols=44 Identities=11% Similarity=0.176 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHhhcCCCCcEEEEcCC
Q 024709 157 ICNGAAKIANKLKASALFVYTK---------TGQMASLLSRSRPDCPIFAFAPM 201 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~---------sG~tA~~iSr~RP~~PIiAvT~~ 201 (264)
.+....+.|.+.+++.||+-++ -|+++..+.+.- +||++.+-+.
T Consensus 108 ~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~-~~pVlvv~~~ 160 (162)
T 1mjh_A 108 PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKS-NKPVLVVKRK 160 (162)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHC-CSCEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhC-CCCEEEEeCC
Confidence 4455667888999998888876 367888888775 4999998654
No 97
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=52.96 E-value=18 Score=28.44 Aligned_cols=55 Identities=15% Similarity=0.115 Sum_probs=41.7
Q ss_pred HHHHhcHHHHHhh--cceeee--cCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEh
Q 024709 16 IDSLKNLNEIILA--SDGAMV--ARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVAS 70 (264)
Q Consensus 16 ~~~~~n~~eI~~~--~Dgi~i--~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~at 70 (264)
...+..+++.+.. .|.|+| |-.|+.-..+.+++....+++++.+++.|.++++.|
T Consensus 48 ~~~~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 48 QQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 3566777776653 787665 455887767778888889999999999998888754
No 98
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=52.89 E-value=82 Score=27.67 Aligned_cols=100 Identities=11% Similarity=0.113 Sum_probs=56.2
Q ss_pred HHHHhcH-HHHHhh-cceeeecCCCcccCCCC---CChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-
Q 024709 16 IDSLKNL-NEIILA-SDGAMVARGDLGAQVPL---EQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD- 89 (264)
Q Consensus 16 ~~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~~---~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d- 89 (264)
.++++++ +-.++. +||+++. |- +.|.+. ++-..+.+.+++.++ -..||++-+ ...+-.|.-+
T Consensus 36 ~~~l~~lv~~li~~Gv~gl~v~-Gt-tGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~st~~ai~l 103 (304)
T 3cpr_A 36 IAAGREVAAYLVDKGLDSLVLA-GT-TGESPTTTAAEKLELLKAVREEVG-DRAKLIAGV---------GTNNTRTSVEL 103 (304)
T ss_dssp HHHHHHHHHHHHHTTCCEEEES-ST-TTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-cc-ccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecC---------CCCCHHHHHHH
Confidence 3455443 555555 8999884 21 223332 333333344444432 247888754 3445555544
Q ss_pred HHHHHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 024709 90 VSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRI 127 (264)
Q Consensus 90 v~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~ 127 (264)
...|-..|+|++|+..=--...-+-+.++..+.|+..+
T Consensus 104 a~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 141 (304)
T 3cpr_A 104 AEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT 141 (304)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 44466789999999755433333556677777776654
No 99
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=52.59 E-value=48 Score=31.15 Aligned_cols=109 Identities=14% Similarity=0.125 Sum_probs=60.5
Q ss_pred cce-EEEeccCHHHHhcHHHHHhh-----cceeeecCCCcc--------cCCCC---CChHHHHHHHHHHHHHh---CCC
Q 024709 6 NIA-VIAKIESIDSLKNLNEIILA-----SDGAMVARGDLG--------AQVPL---EQVPSIQEKIVQLCRQL---NKP 65 (264)
Q Consensus 6 ~~~-iiakIE~~~~~~n~~eI~~~-----~Dgi~i~rgdL~--------~~~~~---~~v~~~qk~ii~~~~~~---gkp 65 (264)
+.. |+.||=--...+++.+|++. +|||.+.-+-.. -+.+- +-+....-++++..+++ ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 456 89998432222355555554 899987644221 01110 11122334555555554 789
Q ss_pred EEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccC-CCChHHHHHHHHHHHHHHHhhhh
Q 024709 66 VIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAM-GQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 66 v~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~-G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
+|....+- ...|+..++..|||+|++..--.. | | .+..+|.++-+.++.
T Consensus 376 VIg~GGI~------------s~~DA~e~l~aGAd~Vqigrall~~g--P----~l~~~i~~~l~~~l~ 425 (443)
T 1tv5_A 376 IIASGGIF------------SGLDALEKIEAGASVCQLYSCLVFNG--M----KSAVQIKRELNHLLY 425 (443)
T ss_dssp EEEESSCC------------SHHHHHHHHHTTEEEEEESHHHHHHG--G----GHHHHHHHHHHHHHH
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEcHHHHhcC--h----HHHHHHHHHHHHHHH
Confidence 99865432 234678899999999999744222 2 3 245555555555543
No 100
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=52.50 E-value=5.4 Score=37.06 Aligned_cols=35 Identities=29% Similarity=0.381 Sum_probs=30.2
Q ss_pred hcCCcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCC
Q 024709 167 KLKASALFVYTKTGQMASLLSR----SRPDCPIFAFAPM 201 (264)
Q Consensus 167 ~l~A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~ 201 (264)
...++.+|+-|.||+||-.+|. ..|.++.+.+||=
T Consensus 226 ~~~~DGliVsTPTGSTAYslSAGGpIv~P~~~~~~ltPI 264 (388)
T 3afo_A 226 RTTADGVALATPTGSTAYSLSAGGSIVSPLVPAILMTPI 264 (388)
T ss_dssp EEEEEEEEEECTGGGGTHHHHTTCCEECTTSCEEEEEEE
T ss_pred eecCCeEEEeCCCcHHHHHHhccCCcccCCCCceEEeee
Confidence 3578999999999999999995 6788888888874
No 101
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=52.35 E-value=24 Score=30.15 Aligned_cols=81 Identities=19% Similarity=0.078 Sum_probs=50.1
Q ss_pred HhcHHHHHhh-ccee--eecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHH-HHHH
Q 024709 19 LKNLNEIILA-SDGA--MVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADV-SELV 94 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi--~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv-~~~v 94 (264)
++.+++.++. +|.| .+--|.+ +.+++...-+++.+.|+++|.|+++-+-.-.-... ..-+..++.+. ..+.
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~----~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~-~~~~~~~~~~~a~~a~ 176 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSD----EDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQ-NERDPELVAHAARLGA 176 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETST----THHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCS-CTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEecCCC----CHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccC-CCCCHhHHHHHHHHHH
Confidence 4567777777 8888 4433433 44556667789999999999999983200000000 00122345555 5677
Q ss_pred Hhcccccccc
Q 024709 95 RQQADALMLS 104 (264)
Q Consensus 95 ~~g~d~~~ls 104 (264)
..|+|.+-++
T Consensus 177 ~~Gad~i~~~ 186 (273)
T 2qjg_A 177 ELGADIVKTS 186 (273)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEC
Confidence 8999998887
No 102
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=52.35 E-value=39 Score=29.68 Aligned_cols=112 Identities=13% Similarity=0.087 Sum_probs=68.3
Q ss_pred ceEEEeccCHHHHhcHHHHHhh-cceeee-cCC-Cc----ccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhC
Q 024709 7 IAVIAKIESIDSLKNLNEIILA-SDGAMV-ARG-DL----GAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEY 79 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~-~Dgi~i-~rg-dL----~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~ 79 (264)
+.+.+-..+. ++++.-++. .|.|++ ... |+ -+..+.++.....+++++.|+++|+.|-..=-+ ...+
T Consensus 77 ~~~~~l~~~~---~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~---~~~~ 150 (302)
T 2ftp_A 77 VTYAALAPNL---KGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISC---VLGC 150 (302)
T ss_dssp SEEEEECCSH---HHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC---TTCB
T ss_pred CEEEEEeCCH---HHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEE---EeeC
Confidence 3444444343 334444444 788886 222 32 123566788888899999999999998421000 0011
Q ss_pred C---CCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHHHHHHHH
Q 024709 80 P---IPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAVLRSVSL 125 (264)
Q Consensus 80 ~---~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~ 125 (264)
+ +-+..++-+++. +...|+|.+.|. +|.=...|.+.-+.+..+.+
T Consensus 151 e~~~~~~~~~~~~~~~~~~~~G~d~i~l~-DT~G~~~P~~~~~lv~~l~~ 199 (302)
T 2ftp_A 151 PYDGDVDPRQVAWVARELQQMGCYEVSLG-DTIGVGTAGATRRLIEAVAS 199 (302)
T ss_dssp TTTBCCCHHHHHHHHHHHHHTTCSEEEEE-ESSSCCCHHHHHHHHHHHTT
T ss_pred CcCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCCCCcCHHHHHHHHHHHHH
Confidence 2 223344555444 447899999999 77777789888888777643
No 103
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=52.34 E-value=36 Score=32.28 Aligned_cols=128 Identities=19% Similarity=0.229 Sum_probs=70.4
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.|+.+- .|..+....+...-..|++.+....+... ..+..+++...+++.+...
T Consensus 126 ~a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~~~~~~~~--- 190 (527)
T 3pc3_A 126 IGLAMACAVKGYKCIIV-----------MPEKMSNEKVSALRTLGAKIIRTPTEAAY-DSPEGLIYVAQQLQRETPN--- 190 (527)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTTSCT-TSTTSHHHHHHHHHHHSSS---
T ss_pred HHHHHHHHHhCCeEEEE-----------EcCCCCHHHHHHHHHCCCEEEEeCCCCCc-ccHHHHHHHHHHHHHhCCC---
Confidence 44566788888888762 23332233445556789988776543211 1122344443333322111
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
.++..+... +.++..--...+.++.++++ .++||+.+-+|.+.--+++ ..|.+.|+++.+...
T Consensus 191 ------~~~~~~~~n--~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~ 259 (527)
T 3pc3_A 191 ------SIVLDQYRN--AGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGS 259 (527)
T ss_dssp ------EECCCTTTC--THHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTC
T ss_pred ------cEecCCCCC--cchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 111122111 11111222334567777774 6899999999998766654 479999999987654
No 104
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=52.23 E-value=42 Score=29.38 Aligned_cols=99 Identities=14% Similarity=0.127 Sum_probs=56.9
Q ss_pred HHHhc-HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHh---CCCEEEEhhhhhhhhhCCCCChHHHHH-H
Q 024709 17 DSLKN-LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQL---NKPVIVASQLLESMIEYPIPTRAEVAD-V 90 (264)
Q Consensus 17 ~~~~n-~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~---gkpv~~atq~leSM~~~~~ptrae~~d-v 90 (264)
+++++ ++-.++. +||+++. | -+.|.+.-.. +-.+++++.+.+. ..||++-+ ...+-.|.-+ .
T Consensus 24 ~~l~~lv~~li~~Gv~gl~~~-G-ttGE~~~Ls~-~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ai~la 91 (294)
T 3b4u_A 24 DAMIAHARRCLSNGCDSVTLF-G-TTGEGCSVGS-RERQAILSSFIAAGIAPSRIVTGV---------LVDSIEDAADQS 91 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEES-S-TTTTGGGSCH-HHHHHHHHHHHHTTCCGGGEEEEE---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-c-cccChhhCCH-HHHHHHHHHHHHHhCCCCcEEEeC---------CCccHHHHHHHH
Confidence 44544 3555555 8999884 2 1223222111 1234445544442 36888754 3444455443 4
Q ss_pred HHHHHhccccccccccccCC-CChHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMG-QFPDKALAVLRSVSLRI 127 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G-~yP~eav~~m~~i~~~~ 127 (264)
..|-..|+|++|+..=--.. .-+-+.++..+.|+..+
T Consensus 92 ~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 92 AEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp HHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 44667899999998654444 45567788888888776
No 105
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=52.04 E-value=42 Score=23.96 Aligned_cols=77 Identities=10% Similarity=0.162 Sum_probs=45.3
Q ss_pred HHHHHHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhhh-cccccccEEEEecCCCCHHHHHHHHHH
Q 024709 161 AAKIANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRRR-LNLQWGLVPFCLNFSDDMESNLNQTFS 234 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~-L~L~~GV~P~~~~~~~~~e~~i~~al~ 234 (264)
+.+...+.+.+.|++-.. +|. ..+.+.+..|.+||+.+|........ -.+..|+.-++.++..+.+. +..+++
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~-l~~~i~ 121 (130)
T 3eod_A 43 ALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNR-LREMVF 121 (130)
T ss_dssp HHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CH-HHHHHH
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHH-HHHHHH
Confidence 344445667786666432 333 45566667789999999987655432 24567888887776534433 344454
Q ss_pred HHHH
Q 024709 235 LLKA 238 (264)
Q Consensus 235 ~~~~ 238 (264)
.+..
T Consensus 122 ~~l~ 125 (130)
T 3eod_A 122 ACLY 125 (130)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 4444
No 106
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=51.97 E-value=78 Score=27.51 Aligned_cols=101 Identities=19% Similarity=0.162 Sum_probs=56.6
Q ss_pred HHHHhcH-HHHHhh-cceeeecCCCcccCCC---CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-
Q 024709 16 IDSLKNL-NEIILA-SDGAMVARGDLGAQVP---LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD- 89 (264)
Q Consensus 16 ~~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~---~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d- 89 (264)
.++++++ +-.++. +||+++. | =+.|.+ .++-..+.+..++.++. ..||++-+ ...+-.|.-+
T Consensus 20 ~~~l~~lv~~li~~Gv~gl~~~-G-ttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~l 87 (289)
T 2yxg_A 20 FDGLEENINFLIENGVSGIVAV-G-TTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGA---------GSNCTEEAIEL 87 (289)
T ss_dssp HHHHHHHHHHHHHTTCSEEEES-S-TTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEC-c-cccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHH
Confidence 3455443 445555 8999884 2 122333 23333333444444332 47888754 3444455444
Q ss_pred HHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 90 VSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 90 v~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
...|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 88 a~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 88 SVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 444667799999997554444445666777777766543
No 107
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=51.91 E-value=79 Score=28.42 Aligned_cols=101 Identities=14% Similarity=0.171 Sum_probs=57.3
Q ss_pred HHHHhc-HHHHHhh-cceeeecCCCc--ccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHH-
Q 024709 16 IDSLKN-LNEIILA-SDGAMVARGDL--GAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADV- 90 (264)
Q Consensus 16 ~~~~~n-~~eI~~~-~Dgi~i~rgdL--~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv- 90 (264)
.+++++ ++-.++. +|||++. |=- +..+..++-..+.+.+++.++. ..||++-+ ...+-.|.-+.
T Consensus 51 ~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~st~eai~la 119 (343)
T 2v9d_A 51 KPGTAALIDDLIKAGVDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVDR-RVPVLIGT---------GGTNARETIELS 119 (343)
T ss_dssp HHHHHHHHHHHHHTTCSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHH
Confidence 345544 3555555 8999884 211 1222334434444444444432 47998754 34555565444
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRI 127 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~ 127 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+
T Consensus 120 ~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~ 156 (343)
T 2v9d_A 120 QHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSV 156 (343)
T ss_dssp HHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 4466779999999755444444566677777776544
No 108
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=51.76 E-value=14 Score=31.43 Aligned_cols=57 Identities=16% Similarity=0.129 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHH
Q 024709 52 QEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVS 124 (264)
Q Consensus 52 qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~ 124 (264)
-+..++.++++|++|.+-|- .+ .+ -+..+...+...|+|+++- +||..+.+.+.+.|
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv------~~-~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~ 257 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMP------WI-FD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNIS 257 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECC------TT-CC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC--
T ss_pred CHHHHHHHHHCCCEEEEeeC------CC-CC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhc
Confidence 36889999999999999771 00 11 1123445677889999875 58988888877665
No 109
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=51.67 E-value=47 Score=28.95 Aligned_cols=72 Identities=13% Similarity=0.101 Sum_probs=48.1
Q ss_pred CChHHHHHHHHHHHHHhCCCE--EEEhhhhhhhhhCCCCChHH-HHHHH-HHHHhccccccccccccCCCChHHHHHHHH
Q 024709 46 EQVPSIQEKIVQLCRQLNKPV--IVASQLLESMIEYPIPTRAE-VADVS-ELVRQQADALMLSGESAMGQFPDKALAVLR 121 (264)
Q Consensus 46 ~~v~~~qk~ii~~~~~~gkpv--~~atq~leSM~~~~~ptrae-~~dv~-~~v~~g~d~~~ls~eta~G~yP~eav~~m~ 121 (264)
+.+..-.+.+.+.|..+|+|+ |+.|-.| +..| +.... -++..|+|+|=-|.-=..|.--+|.|+.|+
T Consensus 117 ~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~ 187 (260)
T 1p1x_A 117 QVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMM 187 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHH
Confidence 667777788999998888885 7766555 4445 32223 367899999866521111222569999999
Q ss_pred HHHHH
Q 024709 122 SVSLR 126 (264)
Q Consensus 122 ~i~~~ 126 (264)
+.+++
T Consensus 188 ~~I~~ 192 (260)
T 1p1x_A 188 EVIRD 192 (260)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 110
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=51.52 E-value=61 Score=28.64 Aligned_cols=98 Identities=15% Similarity=0.205 Sum_probs=56.1
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCCC---CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-H
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQVP---LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD-V 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~---~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d-v 90 (264)
++++++ +-.++. +||+++. | -+.|.+ .++-..+.+.+++.+ -..||++-| ...+-.|.-+ .
T Consensus 29 ~~l~~lv~~li~~Gv~Gl~v~-G-tTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGv---------g~~~t~~ai~la 95 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGVTVL-G-ILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGV---------SAPGFAAMRRLA 95 (313)
T ss_dssp HHHHHHHHHHHHTTCSEEEES-T-GGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEeC-c-cCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEec---------CCCCHHHHHHHH
Confidence 444443 445555 8999984 2 222332 233333344444444 357888754 3445555444 4
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=- .-.-+-+.++..+.|+..+.
T Consensus 96 ~~A~~~Gadavlv~~P~-~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 96 RLSMDAGAAGVMIAPPP-SLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp HHHHHHTCSEEEECCCT-TCCSHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCEEEECCCC-CCCCHHHHHHHHHHHHHhCC
Confidence 45667899999996443 11234566777888877765
No 111
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=51.29 E-value=54 Score=30.60 Aligned_cols=127 Identities=10% Similarity=0.108 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHh
Q 024709 50 SIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEK 129 (264)
Q Consensus 50 ~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~ 129 (264)
..=.-+...|++.|.|+.+- .|..+....+...-..|++.+....+. .| -++++...++..+-+.
T Consensus 185 NhG~AlA~aAa~~Gl~~~Iv-----------mP~~~s~~k~~~~r~~GAeVv~v~~~~---~~-~~a~~~a~el~~~~~~ 249 (430)
T 4aec_A 185 NTGIGLAFIAASRGYRLILT-----------MPASMSMERRVLLKAFGAELVLTDPAK---GM-TGAVQKAEEILKNTPD 249 (430)
T ss_dssp HHHHHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhCCEEEEE-----------EcCCCCHHHHHHHHHCCCEEEEECCCC---Ch-HHHHHHHHHHHHhcCC
Confidence 34456677899999999872 233333344456667899988765321 12 2444443333222111
Q ss_pred hhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCCh
Q 024709 130 WCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKL--KASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMS 202 (264)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l--~A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~ 202 (264)
.++..+... +.....--...+.++.+++ +.+.||+..-+|.+.--+++ ..|.+.||++-+..
T Consensus 250 ---------~~~i~~~~n--p~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~ 317 (430)
T 4aec_A 250 ---------AYMLQQFDN--PANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTE 317 (430)
T ss_dssp ---------EEECCTTTC--THHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred ---------cEEecCCCC--ccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 111122111 1111122233456777776 36899999999998766554 47999999997654
No 112
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=50.89 E-value=39 Score=32.32 Aligned_cols=84 Identities=12% Similarity=0.156 Sum_probs=49.1
Q ss_pred cceEEEe-ccCHHHHhcHHHHHhh-cceeeec-CCCcccCCCCCChHHHHHHHHHHHHH----hCCCEEEEhhhhhhhhh
Q 024709 6 NIAVIAK-IESIDSLKNLNEIILA-SDGAMVA-RGDLGAQVPLEQVPSIQEKIVQLCRQ----LNKPVIVASQLLESMIE 78 (264)
Q Consensus 6 ~~~iiak-IE~~~~~~n~~eI~~~-~Dgi~i~-rgdL~~~~~~~~v~~~qk~ii~~~~~----~gkpv~~atq~leSM~~ 78 (264)
...|+.| +-+ .+......+. +|+|.|+ .|--.++.+... ..+..++.+.++. ...|||....+-
T Consensus 343 ~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~-~~~l~~v~~~v~~~~~~~~ipVia~GGI~----- 413 (511)
T 1kbi_A 343 KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAP-IEVLAETMPILEQRNLKDKLEVFVDGGVR----- 413 (511)
T ss_dssp SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCH-HHHHHHHHHHHHTTTCBTTBEEEEESSCC-----
T ss_pred CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCch-HHHHHHHHHHHHhhccCCCcEEEEECCCC-----
Confidence 4567777 333 2333333344 9999994 221112322222 3445566666653 367888755322
Q ss_pred CCCCChHHHHHHHHHHHhccccccccc
Q 024709 79 YPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 79 ~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
--.|+..++..|||+|++..
T Consensus 414 -------~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 414 -------RGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp -------SHHHHHHHHHHTCSEEEECH
T ss_pred -------CHHHHHHHHHcCCCEEEECH
Confidence 23688999999999999875
No 113
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=50.69 E-value=1.2e+02 Score=26.41 Aligned_cols=120 Identities=17% Similarity=0.194 Sum_probs=67.0
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|....-..+...-..|++.+...+ .| -++.+...++..+
T Consensus 67 ~alA~~a~~~G~~~~i~-----------~p~~~~~~k~~~~~~~Ga~V~~~~~-----~~-~~~~~~a~~~~~~------ 123 (318)
T 2rkb_A 67 IAAAYAARKLGIPATIV-----------LPESTSLQVVQRLQGEGAEVQLTGK-----VW-DEANLRAQELAKR------ 123 (318)
T ss_dssp HHHHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----SH-HHHHHHHHHHHHS------
T ss_pred HHHHHHHHHcCCCEEEE-----------ECCCCcHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHh------
Confidence 34677788999998872 1211111233445567988776532 23 4454444333221
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cC-CCCcEEEEcCCh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SR-PDCPIFAFAPMS 202 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~R-P~~PIiAvT~~~ 202 (264)
.. .++..+. .. + .....-...+.++.++++ .+.||+.+-+|.++--+++ +. |...|+++.+..
T Consensus 124 -~~---~~~~~~~-~n-~-~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~ 193 (318)
T 2rkb_A 124 -DG---WENVPPF-DH-P-LIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHG 193 (318)
T ss_dssp -TT---EEECCSS-CS-H-HHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETT
T ss_pred -cC---CEEeCCC-CC-h-hhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 11 1111111 10 1 112223344567777775 5899999999998776654 23 889999998864
No 114
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=50.49 E-value=76 Score=27.50 Aligned_cols=120 Identities=11% Similarity=0.088 Sum_probs=68.5
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.|+.+- .|.......+...-..|++.+...+. | -++.+...++..+- .+
T Consensus 78 ~alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~-~~-- 137 (311)
T 1ve5_A 78 QGVAYAAQVLGVKALVV-----------MPEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEET-GY-- 137 (311)
T ss_dssp HHHHHHHHHHTCCEEEE-----------CCCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHH-CC--
T ss_pred HHHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhc-Cc--
Confidence 35677899999999873 22222222345666789997755432 3 24555544443321 11
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHh----hcCCCCcEEEEcCCh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKL-----KASALFVYTKTGQMASLLS----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l-----~A~aIVv~T~sG~tA~~iS----r~RP~~PIiAvT~~~ 202 (264)
++..+... + .....-...+.++.+++ +.+.||+.+-+|.++--++ ...|...|+++.+..
T Consensus 138 -------~~~~~~~n--~-~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~ 206 (311)
T 1ve5_A 138 -------ALIHPFDD--P-LVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEA 206 (311)
T ss_dssp -------EECCSSSS--H-HHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred -------EecCCCCC--c-chhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 11111110 1 11122233345566555 4689999999999877655 346999999999864
No 115
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=50.44 E-value=16 Score=37.82 Aligned_cols=86 Identities=17% Similarity=0.261 Sum_probs=48.9
Q ss_pred cceEEEeccCHHHHhcHHHHHhh-----cceeeec-----------------------CCCcccCCCCCChHHHHHHHHH
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA-----SDGAMVA-----------------------RGDLGAQVPLEQVPSIQEKIVQ 57 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~-----~Dgi~i~-----------------------rgdL~~~~~~~~v~~~qk~ii~ 57 (264)
++.|+.|+ ++ .+.++.+++.. +|+|.+. |...+.--+....+..-. ++.
T Consensus 703 ~~Pv~vK~-~~-~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~-~v~ 779 (1025)
T 1gte_A 703 QIPFFAKL-TP-NVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALR-AVT 779 (1025)
T ss_dssp SSCEEEEE-CS-CSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHH-HHH
T ss_pred CCceEEEe-CC-ChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHH-HHH
Confidence 46788887 22 33455555554 8999982 111111112223333333 444
Q ss_pred HHH-Hh-CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 58 LCR-QL-NKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 58 ~~~-~~-gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
..+ .. +.|+|....+ -+ ..|+..++..|+|+||+..-
T Consensus 780 ~v~~~~~~ipvi~~GGI---------~s---~~da~~~l~~Ga~~v~vg~~ 818 (1025)
T 1gte_A 780 TIARALPGFPILATGGI---------DS---AESGLQFLHSGASVLQVCSA 818 (1025)
T ss_dssp HHHHHSTTCCEEEESSC---------CS---HHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHcCCCCEEEecCc---------CC---HHHHHHHHHcCCCEEEEeec
Confidence 443 44 7899985532 22 35778888899999999753
No 116
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=50.30 E-value=21 Score=32.51 Aligned_cols=84 Identities=15% Similarity=0.253 Sum_probs=46.6
Q ss_pred ceEEEe-ccCHHHHhcHHHHHhh-cceeeecCCCccc----CCCCCChHHHHHHHHHHH----HHhC---CCEEEEhhhh
Q 024709 7 IAVIAK-IESIDSLKNLNEIILA-SDGAMVARGDLGA----QVPLEQVPSIQEKIVQLC----RQLN---KPVIVASQLL 73 (264)
Q Consensus 7 ~~iiak-IE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~----~~~~~~v~~~qk~ii~~~----~~~g---kpv~~atq~l 73 (264)
+.|++| +-|++- .....+. +|+|++++|--+. ..+.+ ......++.+.| .+.+ .|+|.+..+-
T Consensus 212 ~pvi~ggi~t~e~---a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~ 287 (393)
T 2qr6_A 212 VPVIAGGVNDYTT---ALHMMRTGAVGIIVGGGENTNSLALGMEVS-MATAIADVAAARRDYLDETGGRYVHIIADGSIE 287 (393)
T ss_dssp SCEEEECCCSHHH---HHHHHTTTCSEEEESCCSCCHHHHTSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC
T ss_pred CCEEECCcCCHHH---HHHHHHcCCCEEEECCCcccccccCCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEECCCC
Confidence 445553 444433 2333334 9999998754211 11222 223333344443 2245 8898754322
Q ss_pred hhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 74 ESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 74 eSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
.-.|+..++..|+|+|++..-
T Consensus 288 ------------~~~dv~kalalGA~~V~iG~~ 308 (393)
T 2qr6_A 288 ------------NSGDVVKAIACGADAVVLGSP 308 (393)
T ss_dssp ------------SHHHHHHHHHHTCSEEEECGG
T ss_pred ------------CHHHHHHHHHcCCCEEEECHH
Confidence 235889999999999998643
No 117
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=49.92 E-value=69 Score=28.05 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=56.9
Q ss_pred HHHhc-HHHHHhh-cceeeecCCCcccCCC---CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-H
Q 024709 17 DSLKN-LNEIILA-SDGAMVARGDLGAQVP---LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD-V 90 (264)
Q Consensus 17 ~~~~n-~~eI~~~-~Dgi~i~rgdL~~~~~---~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d-v 90 (264)
+++++ ++-.++. +||+++. |= +.|.+ .++-..+.+..++.++. ..||++-+ ...+-.|.-+ .
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~-Gt-tGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la 88 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPV-GT-TGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGA---------GSNNPVEAVRYA 88 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECS-SG-GGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-cc-ccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcc---------CCCCHHHHHHHH
Confidence 44544 3445555 8999874 21 22333 34433444444444432 47898754 3444455544 4
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 89 ~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 89 QHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp HHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 44667799999997554444445666777777766543
No 118
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=49.63 E-value=1.1e+02 Score=26.67 Aligned_cols=100 Identities=17% Similarity=0.205 Sum_probs=58.5
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCCCC---CChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-H
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQVPL---EQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD-V 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~~---~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d-v 90 (264)
++++++ +-.++. +||+++. | -+.|.+. ++-..+.+..++.++ -..||++-+ ...+-.|.-+ .
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~-G-ttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la 90 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVN-G-TTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGT---------GTNDTEKSIQAS 90 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEES-S-GGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-c-cccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CcccHHHHHHHH
Confidence 445443 455555 8999984 2 2223332 333333344444442 246998854 3444555443 4
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 91 ~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~ 128 (292)
T 3daq_A 91 IQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVK 128 (292)
T ss_dssp HHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 45666899999997654444456677888888877764
No 119
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=49.61 E-value=69 Score=27.89 Aligned_cols=124 Identities=11% Similarity=0.090 Sum_probs=71.0
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|.......+...-..|++.+...++. .| .++.+...++..+-.
T Consensus 75 ~a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~---- 135 (316)
T 1y7l_A 75 IALAYVAAARGYKITLT-----------MPETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDP---- 135 (316)
T ss_dssp HHHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCT----
T ss_pred HHHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCC----
Confidence 45777899999999873 222222233455666899977765431 12 345444433322110
Q ss_pred cccccccCCCCCCCCCCCCCc-hHH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cC-CCCcEEEEcCChh
Q 024709 133 EGKQHATFEPPPISSSVSAGI-PGE-ICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SR-PDCPIFAFAPMSS 203 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~-~~a-IA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~R-P~~PIiAvT~~~~ 203 (264)
..| ++.++. .+.. ..+ -...+.++.++++ .+.||+.+-+|.+..-+++ ++ |...|+++.+...
T Consensus 136 --~~~--~~~~~~----~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~ 207 (316)
T 1y7l_A 136 --SRY--VMLKQF----ENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVES 207 (316)
T ss_dssp --TTE--ECCCTT----TCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTS
T ss_pred --CCE--EECCCC----CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 010 111221 1111 121 2334567888875 5899999999998776654 35 9999999988654
No 120
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=49.44 E-value=43 Score=30.57 Aligned_cols=69 Identities=17% Similarity=0.216 Sum_probs=43.4
Q ss_pred HHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHHH
Q 024709 17 DSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSEL 93 (264)
Q Consensus 17 ~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~~ 93 (264)
+..+.++..++. +|+|.+..+ .+. +....++++.+++. ++|+++.+ ..+ ..+...+
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~-----~g~---~~~~~e~i~~ir~~~~~~pviv~~----------v~~---~~~a~~a 211 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSA-----HGH---STRIIELIKKIKTKYPNLDLIAGN----------IVT---KEAALDL 211 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCS-----CCS---SHHHHHHHHHHHHHCTTCEEEEEE----------ECS---HHHHHHH
T ss_pred hHHHHHHHHHHCCCCEEEEeCC-----CCC---hHHHHHHHHHHHHHCCCCeEEEcC----------CCc---HHHHHHH
Confidence 345566666666 899887211 111 24445667777777 89998621 112 2455678
Q ss_pred HHhcccccccccc
Q 024709 94 VRQQADALMLSGE 106 (264)
Q Consensus 94 v~~g~d~~~ls~e 106 (264)
...|+|++.++.+
T Consensus 212 ~~~Gad~I~vg~~ 224 (404)
T 1eep_A 212 ISVGADCLKVGIG 224 (404)
T ss_dssp HTTTCSEEEECSS
T ss_pred HhcCCCEEEECCC
Confidence 8899999999543
No 121
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=49.35 E-value=64 Score=28.25 Aligned_cols=127 Identities=9% Similarity=0.086 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhh
Q 024709 51 IQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKW 130 (264)
Q Consensus 51 ~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~ 130 (264)
.=.-+...|++.|.|+.+- .|.......+...-..|++.+...++. .| .++.+...++..+-.
T Consensus 78 ~g~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~-- 140 (322)
T 1z7w_A 78 TGVGLAFTAAAKGYKLIIT-----------MPASMSTERRIILLAFGVELVLTDPAK---GM-KGAIAKAEEILAKTP-- 140 (322)
T ss_dssp HHHHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCT--
T ss_pred HHHHHHHHHHHcCCCEEEE-----------eCCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCC--
Confidence 3345677899999999872 222222233455666899977654321 12 244444444322210
Q ss_pred hhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 131 CREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
.. ++..+... +..+..--..-+.++.++++ .+.||+.+-+|.+.--+++ ..|...|+++.+...
T Consensus 141 ----~~---~~i~~~~n--~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 210 (322)
T 1z7w_A 141 ----NG---YMLQQFEN--PANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 210 (322)
T ss_dssp ----TE---EECCTTTC--THHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred ----Ce---EeCCCCCC--hhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 11 11112111 11111112234567777773 6899999999998766654 469999999988653
No 122
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=49.13 E-value=1.1e+02 Score=25.16 Aligned_cols=42 Identities=14% Similarity=0.306 Sum_probs=30.3
Q ss_pred HhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEh
Q 024709 19 LKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVAS 70 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~at 70 (264)
.+.++.++.- +|||++.+.|- ......++.+++.|+|+++..
T Consensus 51 ~~~~~~l~~~~vdgiIi~~~~~----------~~~~~~~~~~~~~~iPvV~~~ 93 (291)
T 3l49_A 51 VSQIQTLIAQKPDAIIEQLGNL----------DVLNPWLQKINDAGIPLFTVD 93 (291)
T ss_dssp HHHHHHHHHHCCSEEEEESSCH----------HHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHcCCCEEEEeCCCh----------hhhHHHHHHHHHCCCcEEEec
Confidence 4556666665 99999986542 234556888999999999854
No 123
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=48.90 E-value=62 Score=28.56 Aligned_cols=60 Identities=12% Similarity=0.158 Sum_probs=38.8
Q ss_pred HHHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhh-------cccccccEEEEecCCC
Q 024709 163 KIANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRR-------LNLQWGLVPFCLNFSD 223 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~-------L~L~~GV~P~~~~~~~ 223 (264)
..-.+.+|.+|++--..-..++.+++-= ++|++.+-.-..+=-| |.++.|-.|-+.+...
T Consensus 168 ~a~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igIGaG~~~dgQvLV~~D~lG~~~~~~pkf~k~y~ 234 (275)
T 1o66_A 168 KAHDDAGAAVVLMECVLAELAKKVTETV-SCPTIGIGAGADCDGQVLVMHDMLGIFPGKTAKFVKNFM 234 (275)
T ss_dssp HHHHHTTCSEEEEESCCHHHHHHHHHHC-SSCEEEESSCSCSSEEEECHHHHTTCSSSSCCTTCCCSS
T ss_pred HHHHHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEECCCCCCCcceeeHHhhcCCCCCCCCCchhhhh
Confidence 3455679999988766556777777654 4899998766654433 4455565665444333
No 124
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=48.76 E-value=90 Score=25.01 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=35.4
Q ss_pred HhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHH
Q 024709 61 QLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSL 125 (264)
Q Consensus 61 ~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~ 125 (264)
...+|++++..+ .|. ++..+...|+|++.+++-.-..+.|.+.++.+.+.++
T Consensus 160 ~~~~pvia~GGI--------~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 160 SVKIPVVAIGGI--------NKD-----NAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVE 211 (215)
T ss_dssp HCSSCEEEESSC--------CTT-----THHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred hCCCCEEEECCc--------CHH-----HHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHh
Confidence 348899986521 232 4466777899999998765556678777777766554
No 125
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=48.48 E-value=26 Score=29.97 Aligned_cols=73 Identities=14% Similarity=-0.015 Sum_probs=47.3
Q ss_pred CChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH-HHHhcccccccccccc----------CCCChH
Q 024709 46 EQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGESA----------MGQFPD 114 (264)
Q Consensus 46 ~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~eta----------~G~yP~ 114 (264)
+.+..-.+.+.+.|...+.|||+.|-.| |..|+..... +...|+|+|=-|.-=. .|.--+
T Consensus 98 ~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~ 168 (226)
T 1vcv_A 98 AEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTP 168 (226)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCH
T ss_pred HHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCH
Confidence 4555666677777766677888866444 5666654444 6678999986652111 133346
Q ss_pred HHHHHHHHHHHHH
Q 024709 115 KALAVLRSVSLRI 127 (264)
Q Consensus 115 eav~~m~~i~~~~ 127 (264)
+.|+.|++.++++
T Consensus 169 ~dv~lm~~~i~~~ 181 (226)
T 1vcv_A 169 ERAAAIARYIKEK 181 (226)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8899999876654
No 126
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=48.41 E-value=69 Score=27.92 Aligned_cols=100 Identities=15% Similarity=0.161 Sum_probs=57.0
Q ss_pred HHHhc-HHHHHhh-cceeeecCCCcccCCC---CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-H
Q 024709 17 DSLKN-LNEIILA-SDGAMVARGDLGAQVP---LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD-V 90 (264)
Q Consensus 17 ~~~~n-~~eI~~~-~Dgi~i~rgdL~~~~~---~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d-v 90 (264)
+++++ ++-.++. +||+++. | =+.|.+ .++-..+.+.+++.++. ..||++-+ ...+-.|.-+ .
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~-G-ttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la 88 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPC-G-TTGESPTLSKSEHEQVVEITIKTANG-RVPVIAGA---------GSNSTAEAIAFV 88 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETT-S-GGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-c-cccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHH
Confidence 44544 3555555 8999874 2 122332 33433444444444432 47998754 3444455444 4
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 89 ~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 89 RHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 44667899999997654444445667777777766543
No 127
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=48.33 E-value=77 Score=27.60 Aligned_cols=101 Identities=12% Similarity=0.127 Sum_probs=55.4
Q ss_pred HHHHhcH-HHHHhh-cceeeecCCCc--ccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHH
Q 024709 16 IDSLKNL-NEIILA-SDGAMVARGDL--GAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVS 91 (264)
Q Consensus 16 ~~~~~n~-~eI~~~-~Dgi~i~rgdL--~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~ 91 (264)
.++++++ +-.++. +||+++. |-- +..+..++-..+.+..++.++. ..||++-+ ...+-.|.-+.+
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la 89 (292)
T 2ojp_A 21 RASLKKLIDYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGT---------GANATAEAISLT 89 (292)
T ss_dssp HHHHHHHHHHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHH
Confidence 3455443 555555 9999884 211 1222234433444444444432 47998754 344445554444
Q ss_pred -HHHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 024709 92 -ELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRI 127 (264)
Q Consensus 92 -~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~ 127 (264)
.|-..|+|++|+..=--...-+-+.++..+.|+..+
T Consensus 90 ~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 90 QRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT 126 (292)
T ss_dssp HHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 455679999999755443334455666666665433
No 128
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=48.20 E-value=58 Score=28.99 Aligned_cols=125 Identities=12% Similarity=0.113 Sum_probs=70.8
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|.......+...-..|++.+...++. .| -++.+...++..+-..
T Consensus 91 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~--- 152 (343)
T 2pqm_A 91 IALCQAGAVFGYRVNIA-----------MPSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPG--- 152 (343)
T ss_dssp HHHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTT---
T ss_pred HHHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCC---
Confidence 35777899999999873 222222233455666799987765431 12 3454444433222110
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
.| +...+. .. +.++..-....+ ++.++++ .+.||+.+-+|.++.-+++ .+|...|+++.+...
T Consensus 153 ---~y--~~~~~~-~n-~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~ 221 (343)
T 2pqm_A 153 ---KY--FVANQF-GN-PDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEES 221 (343)
T ss_dssp ---TE--EECCTT-TC-HHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred ---cE--EECCCC-CC-hhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 00 111111 10 111111133444 8888875 5899999999998766553 569999999988654
No 129
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=48.04 E-value=54 Score=29.09 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=47.6
Q ss_pred cceEEEeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCCh
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTR 84 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptr 84 (264)
.+.++.++-+.+-... ..+. +|+|.+--.+.|...|...-....+++ .+..+.|++.+.-+-
T Consensus 124 g~~v~~~v~s~~~a~~---a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i---~~~~~iPviaaGGI~----------- 186 (326)
T 3bo9_A 124 GTKVIPVVASDSLARM---VERAGADAVIAEGMESGGHIGEVTTFVLVNKV---SRSVNIPVIAAGGIA----------- 186 (326)
T ss_dssp TCEEEEEESSHHHHHH---HHHTTCSCEEEECTTSSEECCSSCHHHHHHHH---HHHCSSCEEEESSCC-----------
T ss_pred CCcEEEEcCCHHHHHH---HHHcCCCEEEEECCCCCccCCCccHHHHHHHH---HHHcCCCEEEECCCC-----------
Confidence 4678888877655443 3344 899999432333333311122222233 234589999876322
Q ss_pred HHHHHHHHHHHhcccccccc
Q 024709 85 AEVADVSELVRQQADALMLS 104 (264)
Q Consensus 85 ae~~dv~~~v~~g~d~~~ls 104 (264)
...|+..++..|+|+|+++
T Consensus 187 -~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 187 -DGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp -SHHHHHHHHHHTCSEEEES
T ss_pred -CHHHHHHHHHhCCCEEEec
Confidence 2346788888999999886
No 130
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=47.70 E-value=93 Score=27.05 Aligned_cols=100 Identities=15% Similarity=0.206 Sum_probs=57.0
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHH-HHH
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEV-ADV 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~-~dv 90 (264)
++++++ +-.++. +||+++. | -+.|. ..++-..+.+..++.++. ..||++-+ ...+-.|. .-.
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~-G-ttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la 89 (291)
T 3tak_A 22 KSLEKLVEWHIEQGTNSIVAV-G-TTGEASTLSMEEHTQVIKEIIRVANK-RIPIIAGT---------GANSTREAIELT 89 (291)
T ss_dssp HHHHHHHHHHHHHTCCEEEES-S-TTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEC-c-cccccccCCHHHHHHHHHHHHHHhCC-CCeEEEeC---------CCCCHHHHHHHH
Confidence 444443 445555 9999874 2 12232 223433344444444432 37998854 34444554 344
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..+-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 90 ~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 90 KAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp HHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 45677899999997554444445667777777776653
No 131
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=47.59 E-value=40 Score=25.85 Aligned_cols=45 Identities=13% Similarity=0.225 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHhhcCCCCcEEEEcCCh
Q 024709 157 ICNGAAKIANKLKASALFVYTK---------TGQMASLLSRSRPDCPIFAFAPMS 202 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~---------sG~tA~~iSr~RP~~PIiAvT~~~ 202 (264)
.+....+.|.+.+++.||+-++ -|+++..+.+.-| ||++.+-+..
T Consensus 105 ~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~-~PVlvv~~~~ 158 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTK-KPVLIIKEVD 158 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCS-SCEEEECCCC
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCC-CCEEEEccCC
Confidence 4556677889999998888776 2557777777655 9999987554
No 132
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=47.22 E-value=40 Score=26.12 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHhhcCCCCcEEEEcCCh
Q 024709 157 ICNGAAKIANKLKASALFVYTK---------TGQMASLLSRSRPDCPIFAFAPMS 202 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~---------sG~tA~~iSr~RP~~PIiAvT~~~ 202 (264)
.+...++.|.+.+++.||+-++ -|+++..+.+.-| ||++.+-+..
T Consensus 107 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~-~PVlvV~~~~ 160 (163)
T 1tq8_A 107 PVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAK-VDVLIVHTTE 160 (163)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTT-CEEEEECCC-
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCC-CCEEEEeCCC
Confidence 3455667888999998888876 2456777777654 9999986543
No 133
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=47.17 E-value=64 Score=29.04 Aligned_cols=121 Identities=16% Similarity=0.247 Sum_probs=68.0
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|..+....+...-..|++.+...+ .| -++.+...+++.+-..+
T Consensus 106 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~-- 166 (364)
T 4h27_A 106 MAAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGW-- 166 (364)
T ss_dssp HHHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTE--
T ss_pred HHHHHHHHHhCCceEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCe--
Confidence 45677789999998873 2222222234455567998766642 33 35655555543321011
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cC-CCCcEEEEcCCh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SR-PDCPIFAFAPMS 202 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~R-P~~PIiAvT~~~ 202 (264)
.| ..+. .. + .....-...+.++.++++ .+.||+.+-+|.+.--+++ .. |+++|+++-++.
T Consensus 167 ---~~----~~~~-~n-p-~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~ 233 (364)
T 4h27_A 167 ---VY----IPPF-DD-P-LIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFG 233 (364)
T ss_dssp ---EE----ECSS-CS-H-HHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred ---EE----eCCC-CC-H-HHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 11 1111 00 1 111222234567777775 5899999999998665543 33 889999997643
No 134
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=46.62 E-value=67 Score=22.72 Aligned_cols=67 Identities=12% Similarity=0.003 Sum_probs=40.8
Q ss_pred HHHHHHhcCCcEEEEEcC----Cch-HHHHHhhc--CCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHH
Q 024709 161 AAKIANKLKASALFVYTK----TGQ-MASLLSRS--RPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESN 228 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T~----sG~-tA~~iSr~--RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~ 228 (264)
+.....+.+.+.|++-.. +|. ..+.+.+. .|.+||+++|........-.+..|+.-++.++. +.++.
T Consensus 39 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~-~~~~L 112 (127)
T 3i42_A 39 ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAKNDLGKEACELFDFYLEKPI-DIASL 112 (127)
T ss_dssp HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-CTTCCHHHHHHCSEEEESSC-CHHHH
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcchhHHHHHHHhhHHheeCCC-CHHHH
Confidence 334445567787776532 343 34455555 688999999987766544456778777766543 34443
No 135
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=46.59 E-value=93 Score=27.33 Aligned_cols=100 Identities=11% Similarity=0.151 Sum_probs=55.5
Q ss_pred HHHHhc-HHHHHhh-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-
Q 024709 16 IDSLKN-LNEIILA-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD- 89 (264)
Q Consensus 16 ~~~~~n-~~eI~~~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d- 89 (264)
.+++++ ++-.++. +||+++. | =+.|. ..++-..+.+..++.++ -..||++-+ ...+-.|.-+
T Consensus 32 ~~~l~~lv~~li~~Gv~gl~v~-G-tTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGv---------g~~st~~ai~l 99 (306)
T 1o5k_A 32 LESYERLVRYQLENGVNALIVL-G-TTGESPTVNEDEREKLVSRTLEIVD-GKIPVIVGA---------GTNSTEKTLKL 99 (306)
T ss_dssp HHHHHHHHHHHHHTTCCEEEES-S-GGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeC-c-cccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEcC---------CCccHHHHHHH
Confidence 345544 3555555 8999884 2 12233 33343344444444443 247998755 3444455544
Q ss_pred HHHHHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 024709 90 VSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRI 127 (264)
Q Consensus 90 v~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~ 127 (264)
...|-..|+|++|+..=--...-+-+.++..+.|+..+
T Consensus 100 a~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (306)
T 1o5k_A 100 VKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT 137 (306)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 34466779999999755443334455666666665433
No 136
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=46.51 E-value=47 Score=27.02 Aligned_cols=91 Identities=9% Similarity=0.019 Sum_probs=52.1
Q ss_pred HhcHHHHHhhcceeee-c--CCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHHH
Q 024709 19 LKNLNEIILASDGAMV-A--RGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSEL 93 (264)
Q Consensus 19 ~~n~~eI~~~~Dgi~i-~--rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~~ 93 (264)
.+.++++...+|.|++ + +|-=|...+ +....-.+++-+.+.+. +.|++++.. -.| .++..+
T Consensus 122 ~e~~~~~~~~~d~vl~~~~~~g~~g~~~~-~~~~~~i~~~~~~~~~~~~~~~i~v~GG--------I~~-----~~~~~~ 187 (220)
T 2fli_A 122 ATALEPLLDLVDQVLIMTVNPGFGGQAFI-PECLEKVATVAKWRDEKGLSFDIEVDGG--------VDN-----KTIRAC 187 (220)
T ss_dssp GGGGGGGTTTCSEEEEESSCTTCSSCCCC-GGGHHHHHHHHHHHHHTTCCCEEEEESS--------CCT-----TTHHHH
T ss_pred HHHHHHHHhhCCEEEEEEECCCCcccccC-HHHHHHHHHHHHHHHhcCCCceEEEECc--------CCH-----HHHHHH
Confidence 3444455556887754 2 221122233 22222234444444433 577776432 234 244566
Q ss_pred HHhccccccccccccCCCChHHHHHHHHHH
Q 024709 94 VRQQADALMLSGESAMGQFPDKALAVLRSV 123 (264)
Q Consensus 94 v~~g~d~~~ls~eta~G~yP~eav~~m~~i 123 (264)
...|+|++..++---.+..|.++++.+.+.
T Consensus 188 ~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 188 YEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp HHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 667999999987777778899999888653
No 137
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=45.76 E-value=89 Score=27.47 Aligned_cols=99 Identities=13% Similarity=0.087 Sum_probs=55.2
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH-H
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD-V 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d-v 90 (264)
++++++ +-.++. +||+++. | -+.|. ..++-..+.+..++.++ -..||++-+ ...+-.|.-+ .
T Consensus 36 ~~l~~lv~~li~~Gv~gi~v~-G-ttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la 103 (304)
T 3l21_A 36 ATAARLANHLVDQGCDGLVVS-G-TTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGA---------GTYDTAHSIRLA 103 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEES-S-TTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeC-c-cccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeC---------CCCCHHHHHHHH
Confidence 444443 445555 8999984 1 12222 22333333344444443 246888754 3445555544 4
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRI 127 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~ 127 (264)
..+-..|+|++|+..=--...-+-+.++..+.|+..+
T Consensus 104 ~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 140 (304)
T 3l21_A 104 KACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADAT 140 (304)
T ss_dssp HHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSC
T ss_pred HHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 4566789999999755444434566667777766554
No 138
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=45.64 E-value=54 Score=30.56 Aligned_cols=128 Identities=15% Similarity=0.176 Sum_probs=67.0
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|.......+...-..|++.+....+...+ .+...++...++..+...
T Consensus 174 ~AlA~aaa~~Gi~~~Iv-----------mP~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~--- 238 (435)
T 1jbq_A 174 IGLALAAAVRGYRCIIV-----------MPEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPN--- 238 (435)
T ss_dssp HHHHHHHHHHTCEEEEE-----------ECSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTT---
T ss_pred HHHHHHHHHcCCeEEEE-----------eCCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCC---
Confidence 45667788888888872 222222223445556799877665331111 111123333332221110
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
.++..+... +.++..-....+.++.++++ .+.||+.+-+|.++--+++ ..|.+.||++.+...
T Consensus 239 ------~~~i~q~~n--~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs 307 (435)
T 1jbq_A 239 ------SHILDQYRN--ASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 307 (435)
T ss_dssp ------EECCCTTTC--THHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTC
T ss_pred ------eEEeCccCC--cccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 111122111 11111112233567777774 6899999999998766654 469999999988554
No 139
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=45.53 E-value=7.3 Score=34.55 Aligned_cols=35 Identities=20% Similarity=0.409 Sum_probs=28.0
Q ss_pred HhcCCcEEEEEcCCchHHHHHhh----cCCCCcEEEEcC
Q 024709 166 NKLKASALFVYTKTGQMASLLSR----SRPDCPIFAFAP 200 (264)
Q Consensus 166 ~~l~A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~ 200 (264)
.+..++.++|-|.||+||-.+|. ..|..+.+.+||
T Consensus 169 ~~~~~DGlIVsTPTGSTAY~lSAGGpIv~P~~~~l~ltP 207 (278)
T 1z0s_A 169 DRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIP 207 (278)
T ss_dssp EEEEESEEEEEESGGGGTHHHHTTCCEECTTSCCEEEEE
T ss_pred EEEecCeEEEecCCchhHHHhhCCCceeCCCCCeEEEEE
Confidence 34578999999999999999995 346667777765
No 140
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=45.42 E-value=58 Score=28.44 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=54.8
Q ss_pred CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC---CCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHH
Q 024709 44 PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP---IPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAV 119 (264)
Q Consensus 44 ~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~---~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~ 119 (264)
+.++.....++.++.++++|++|-+..-+- ..++ +-+..++.+++. +...|+|.+.|. +|.=...|.+.-+.
T Consensus 115 ~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G~~~P~~~~~l 190 (298)
T 2cw6_A 115 SIEESFQRFDAILKAAQSANISVRGYVSCA---LGCPYEGKISPAKVAEVTKKFYSMGCYEISLG-DTIGVGTPGIMKDM 190 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEETT---TCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-ETTSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEEEEE---eeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec-CCCCCcCHHHHHHH
Confidence 345666777889999999999986532111 1122 223445555554 567899999998 78778899998888
Q ss_pred HHHHHHHH
Q 024709 120 LRSVSLRI 127 (264)
Q Consensus 120 m~~i~~~~ 127 (264)
++.+.++.
T Consensus 191 v~~l~~~~ 198 (298)
T 2cw6_A 191 LSAVMQEV 198 (298)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhC
Confidence 88776543
No 141
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=44.88 E-value=88 Score=25.43 Aligned_cols=77 Identities=9% Similarity=0.034 Sum_probs=42.0
Q ss_pred cceeeecCCCcccC-CCCC-ChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 29 SDGAMVARGDLGAQ-VPLE-QVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 29 ~Dgi~i~rgdL~~~-~~~~-~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
+|.|+++....+-. .+.. ..+. ...+-+.++..+.|++.... .-+. .|+..+...|+|++++..
T Consensus 140 ~d~i~~~~~g~t~~~~~~~~~~~~-~~~~~~~~~~~~ipvia~GG---------I~~~---~~~~~~~~~Gad~v~vG~- 205 (223)
T 1y0e_A 140 FDYIGTTLHGYTSYTQGQLLYQND-FQFLKDVLQSVDAKVIAEGN---------VITP---DMYKRVMDLGVHCSVVGG- 205 (223)
T ss_dssp CSEEECTTTTSSTTSTTCCTTHHH-HHHHHHHHHHCCSEEEEESS---------CCSH---HHHHHHHHTTCSEEEECH-
T ss_pred CCEEEeCCCcCcCCCCCCCCCccc-HHHHHHHHhhCCCCEEEecC---------CCCH---HHHHHHHHcCCCEEEECh-
Confidence 89998865433211 1111 2222 22233333446899998542 2233 355677778999999973
Q ss_pred ccCCCChHHHHHHHH
Q 024709 107 SAMGQFPDKALAVLR 121 (264)
Q Consensus 107 ta~G~yP~eav~~m~ 121 (264)
+.-+ |.++.+.+.
T Consensus 206 -al~~-p~~~~~~~~ 218 (223)
T 1y0e_A 206 -AITR-PKEITKRFV 218 (223)
T ss_dssp -HHHC-HHHHHHHHH
T ss_pred -HHcC-cHHHHHHHH
Confidence 3323 666665554
No 142
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=44.73 E-value=75 Score=27.57 Aligned_cols=125 Identities=9% Similarity=0.090 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhh
Q 024709 52 QEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWC 131 (264)
Q Consensus 52 qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~ 131 (264)
=.-+...|++.|.|+.+- .|.......+...-..|++.+....+ |.| -++.+...++..
T Consensus 73 g~a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~---~~~-~~~~~~a~~~~~------ 131 (303)
T 2v03_A 73 GIALAMIAALKGYRMKLL-----------MPDNMSQERRAAMRAYGAELILVTKE---QGM-EGARDLALEMAN------ 131 (303)
T ss_dssp HHHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTT---THH-HHHHHHHHHHHH------
T ss_pred HHHHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHH------
Confidence 345778889999998872 22222222344566689998776542 222 234333332221
Q ss_pred hcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 132 REGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
+...+ + ..+. .. +..+..--...+.++.++++ .+.||+.+-+|.+..-+++ ..|...|+++.+...
T Consensus 132 -~~~~~--~-~~~~-~n-~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 203 (303)
T 2v03_A 132 -RGEGK--L-LDQF-NN-PDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEG 203 (303)
T ss_dssp -TTSCE--E-CCTT-TC-THHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTT
T ss_pred -hCCCc--c-cCCc-CC-hhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCC
Confidence 10111 1 1111 10 11111112334567777775 6899999999998766553 469999999998654
No 143
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=44.64 E-value=55 Score=28.98 Aligned_cols=100 Identities=10% Similarity=0.119 Sum_probs=57.6
Q ss_pred HHHHhc-HHHHHhh-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHH-H
Q 024709 16 IDSLKN-LNEIILA-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVA-D 89 (264)
Q Consensus 16 ~~~~~n-~~eI~~~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~-d 89 (264)
.+++++ ++-.++. +|||++. | =+.|. ..++-..+.+.+++.++ -..||++-+ .. +-.|.- -
T Consensus 32 ~~~l~~lv~~li~~Gv~gl~v~-G-tTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGv---------g~-st~~ai~l 98 (314)
T 3d0c_A 32 WKGLDDNVEFLLQNGIEVIVPN-G-NTGEFYALTIEEAKQVATRVTELVN-GRATVVAGI---------GY-SVDTAIEL 98 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEECTT-S-GGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEE---------CS-SHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-c-ccCChhhCCHHHHHHHHHHHHHHhC-CCCeEEecC---------Cc-CHHHHHHH
Confidence 344544 3555555 8999874 2 12233 33443444444444443 246888755 23 444543 3
Q ss_pred HHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 90 VSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 90 v~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
...|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 99 a~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (314)
T 3d0c_A 99 GKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALD 137 (314)
T ss_dssp HHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSS
T ss_pred HHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 444667899999997654444446667777888876554
No 144
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=44.58 E-value=40 Score=30.04 Aligned_cols=79 Identities=20% Similarity=0.205 Sum_probs=50.8
Q ss_pred HHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHH-hCCCEEEEhhhhhhhhhCC-CCChHHHHHHHH
Q 024709 16 IDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQ-LNKPVIVASQLLESMIEYP-IPTRAEVADVSE 92 (264)
Q Consensus 16 ~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~-~gkpv~~atq~leSM~~~~-~ptrae~~dv~~ 92 (264)
.+..+.++.+++. .|+|||| +.+...+..--..+++++++ ...|++. +-| .+... +
T Consensus 53 ~~~~~~~~~~~~sGtDai~VG------S~~vt~~~~~~~~~v~~ik~~~~lPvil---------~fPP~~g~~------~ 111 (286)
T 3vk5_A 53 TEAVEKAAELTRLGFAAVLLA------STDYESFESHMEPYVAAVKAATPLPVVL---------HFPPRPGAG------F 111 (286)
T ss_dssp HHHHHHHHHHHHTTCSCEEEE------CSCCSSHHHHHHHHHHHHHHHCSSCEEE---------ECCCBTTTB------S
T ss_pred HHHHHHHHHHHhcCCCEEEEc------cCCCCcchHHHHHHHHHHHHhCCCCEEE---------ECCCCCCCc------c
Confidence 3445567778877 9999998 23334556667788888998 7999995 111 11222 3
Q ss_pred HHHhccccccccccccCCCChHHH
Q 024709 93 LVRQQADALMLSGESAMGQFPDKA 116 (264)
Q Consensus 93 ~v~~g~d~~~ls~eta~G~yP~ea 116 (264)
.+..|+|+++.-. --+|..|-=.
T Consensus 112 ~i~~~aDa~l~ps-vlNs~n~~~i 134 (286)
T 3vk5_A 112 PVVRGADALLLPA-LLGSGDDYFV 134 (286)
T ss_dssp CCCTTCSEEEEEE-ETTBSSHHHH
T ss_pred ccccCCCEEEEEE-EecCCCcccc
Confidence 3467999988753 3455556433
No 145
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=44.50 E-value=82 Score=22.36 Aligned_cols=68 Identities=7% Similarity=-0.052 Sum_probs=38.6
Q ss_pred HHHHHhcCCcEEEEEcC----Cch-HHHHHhhc--CCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHHHH
Q 024709 162 AKIANKLKASALFVYTK----TGQ-MASLLSRS--RPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESNLN 230 (264)
Q Consensus 162 v~lA~~l~A~aIVv~T~----sG~-tA~~iSr~--RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~ 230 (264)
.....+.+.+.|++-.. +|. ..+.+.+. .|..||+.+|........-.+..|+.-++.++ -+.++...
T Consensus 40 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP-~~~~~l~~ 114 (133)
T 3nhm_A 40 LQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKP-VKPPVLIA 114 (133)
T ss_dssp HHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESS-CCHHHHHH
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEecc-CCHHHHHH
Confidence 34455567787666432 343 23444443 46899999998755444556778888777654 34444433
No 146
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=44.47 E-value=67 Score=27.53 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=46.6
Q ss_pred HHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHH----------------HHHHHHHHh--CCCEEEEhhhhhhhh
Q 024709 17 DSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQE----------------KIVQLCRQL--NKPVIVASQLLESMI 77 (264)
Q Consensus 17 ~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk----------------~ii~~~~~~--gkpv~~atq~leSM~ 77 (264)
+.++-+..+.+. +|+|.+| .-+ .=|..+=|.+|+ .++++.++. ++|+++-|-
T Consensus 32 ~~~~~~~~l~~~G~D~IElG-~P~--sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y------ 102 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEIG-FPF--SDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTY------ 102 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEEE-CCC--SCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECC------
T ss_pred HHHHHHHHHHHcCCCEEEEC-CCC--CCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEec------
Confidence 345566677777 9999995 111 224445566664 456777766 899998321
Q ss_pred hCCCCChHHHHHHHHHHHhcccccccc
Q 024709 78 EYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 78 ~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
.||.-...--..+..+...|+|++++.
T Consensus 103 ~n~v~~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 103 YNPIFRIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HHHHHHHCHHHHHHHHHHTTCCEEECT
T ss_pred CcHHHHhhHHHHHHHHHHcCCCEEEEC
Confidence 111100111234455777899999886
No 147
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=43.89 E-value=50 Score=24.28 Aligned_cols=41 Identities=17% Similarity=0.305 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC--------CchHHHHHhhcCCCCcEEEE
Q 024709 157 ICNGAAKIANKLKASALFVYTK--------TGQMASLLSRSRPDCPIFAF 198 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~--------sG~tA~~iSr~RP~~PIiAv 198 (264)
.+....+.|++.+++.||+-++ -|+++..+.+.-| ||++.+
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~-~pVlvv 142 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAE-CSVLVV 142 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCS-SEEEEE
T ss_pred hHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhCC-CCEEEe
Confidence 4556667889999999888876 3567777777544 999875
No 148
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=43.49 E-value=70 Score=26.61 Aligned_cols=83 Identities=19% Similarity=0.281 Sum_probs=45.9
Q ss_pred hcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcc
Q 024709 20 KNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQA 98 (264)
Q Consensus 20 ~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~ 98 (264)
+.++..++. +|+|.++ |+.. ++ -+++++.|+++|..++++- ++. |..| ...++..++
T Consensus 99 ~~~~~~~~~Gad~v~~~--~~~~----~~----~~~~~~~~~~~g~~~~~~i--------~~~-t~~e---~~~~~~~~~ 156 (248)
T 1geq_A 99 NFLAEAKASGVDGILVV--DLPV----FH----AKEFTEIAREEGIKTVFLA--------APN-TPDE---RLKVIDDMT 156 (248)
T ss_dssp HHHHHHHHHTCCEEEET--TCCG----GG----HHHHHHHHHHHTCEEEEEE--------CTT-CCHH---HHHHHHHHC
T ss_pred HHHHHHHHCCCCEEEEC--CCCh----hh----HHHHHHHHHHhCCCeEEEE--------CCC-CHHH---HHHHHHhcC
Confidence 445555566 9999994 6543 22 3578999999999888732 121 2222 245556667
Q ss_pred ccccccccc--cCCC---ChHHHHHHHHHHH
Q 024709 99 DALMLSGES--AMGQ---FPDKALAVLRSVS 124 (264)
Q Consensus 99 d~~~ls~et--a~G~---yP~eav~~m~~i~ 124 (264)
|.+++...+ ..|. ++....+.++++.
T Consensus 157 d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~ 187 (248)
T 1geq_A 157 TGFVYLVSLYGTTGAREEIPKTAYDLLRRAK 187 (248)
T ss_dssp SSEEEEECCC-------CCCHHHHHHHHHHH
T ss_pred CCeEEEEECCccCCCCCCCChhHHHHHHHHH
Confidence 733211111 0122 5556666666654
No 149
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=43.45 E-value=89 Score=22.46 Aligned_cols=76 Identities=12% Similarity=0.032 Sum_probs=45.7
Q ss_pred HHHHHHhcCCcEEEEEcC----Cch-HHHHHhh--cCCCCcEEEEcCChhhhhh--cccccccEEEEecCCCCHHHHHHH
Q 024709 161 AAKIANKLKASALFVYTK----TGQ-MASLLSR--SRPDCPIFAFAPMSSVRRR--LNLQWGLVPFCLNFSDDMESNLNQ 231 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T~----sG~-tA~~iSr--~RP~~PIiAvT~~~~~aR~--L~L~~GV~P~~~~~~~~~e~~i~~ 231 (264)
+.....+.+.+.|++-.. +|. ..+.+.+ ..|.+||+.+|........ ..+..|+.-++.++. +.++.. .
T Consensus 42 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~-~~~~l~-~ 119 (140)
T 3grc_A 42 ALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPI-DENLLI-L 119 (140)
T ss_dssp HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSC-CHHHHH-H
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCC-CHHHHH-H
Confidence 344455667787776432 343 3445555 5689999999998765432 456778888877653 444443 3
Q ss_pred HHHHHHH
Q 024709 232 TFSLLKA 238 (264)
Q Consensus 232 al~~~~~ 238 (264)
+++.+.+
T Consensus 120 ~i~~~l~ 126 (140)
T 3grc_A 120 SLHRAID 126 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4443433
No 150
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=43.29 E-value=95 Score=27.49 Aligned_cols=100 Identities=17% Similarity=0.161 Sum_probs=57.2
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCCC---CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHH-HHH
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQVP---LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEV-ADV 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~---~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~-~dv 90 (264)
++++++ +-.++. +||+++. | =+.|.+ .++-..+.+..++.++. ..||++-+ ...+-.|. .-.
T Consensus 43 ~~l~~li~~li~~Gv~Gl~v~-G-tTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~~ai~la 110 (315)
T 3si9_A 43 KAFCNFVEWQITQGINGVSPV-G-TTGESPTLTHEEHKRIIELCVEQVAK-RVPVVAGA---------GSNSTSEAVELA 110 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECS-S-TTTTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeC-c-cccCccccCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHH
Confidence 444443 445555 8999874 2 222322 23333333444444432 47999855 34445554 344
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 111 ~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 148 (315)
T 3si9_A 111 KHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAIS 148 (315)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 45777899999997554444445667777777776653
No 151
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=43.23 E-value=91 Score=27.24 Aligned_cols=120 Identities=19% Similarity=0.249 Sum_probs=69.6
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|.......+...-..|++.+...+. | -++.+...++..+- .
T Consensus 87 ~alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~-~--- 145 (323)
T 1v71_A 87 QAIALSAKILGIPAKII-----------MPLDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISERE-G--- 145 (323)
T ss_dssp HHHHHHHHHTTCCEEEE-----------EETTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHH-T---
T ss_pred HHHHHHHHHcCCCEEEE-----------CCCCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhc-C---
Confidence 45677899999999873 11111122345666789998765532 2 13444444432221 1
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCCh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK-ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMS 202 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~-A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~ 202 (264)
.++.++. .. +. ....-...+.++.++++ .+.||+.+-+|.|+--+++ ++|...|+++.+..
T Consensus 146 ------~~~i~~~-~n-~~-~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~ 211 (323)
T 1v71_A 146 ------LTIIPPY-DH-PH-VLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEA 211 (323)
T ss_dssp ------CBCCCSS-SS-HH-HHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred ------CEecCCC-CC-cc-hhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 1112221 10 11 11223334566777664 6899999999998776654 56999999998864
No 152
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=43.19 E-value=46 Score=24.56 Aligned_cols=41 Identities=10% Similarity=0.208 Sum_probs=30.9
Q ss_pred HHHHHHH-HHHhcCCcEEEEEcC---------CchHHHHHhhcCCCCcEEEE
Q 024709 157 ICNGAAK-IANKLKASALFVYTK---------TGQMASLLSRSRPDCPIFAF 198 (264)
Q Consensus 157 IA~aAv~-lA~~l~A~aIVv~T~---------sG~tA~~iSr~RP~~PIiAv 198 (264)
.+....+ .|++.+++.||+-++ -|+++..+.+.-| ||++.+
T Consensus 95 ~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 95 PKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp HHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred hHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 4556667 788899998888764 3667888877766 999875
No 153
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=43.11 E-value=57 Score=30.21 Aligned_cols=70 Identities=13% Similarity=0.344 Sum_probs=46.6
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHh-cc-
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQ-QA- 98 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~-g~- 98 (264)
+|.+.+. +|.+=||-+|+ ..++ +++++-+.||||++.|.| -|..|+...++.+.. |.
T Consensus 127 vd~l~~~~vd~~KIgS~~~------~N~p-----LL~~va~~gKPViLStGm---------aTl~Ei~~Ave~i~~~Gn~ 186 (385)
T 1vli_A 127 ADLLQSTSPSAFKIASYEI------NHLP-----LLKYVARLNRPMIFSTAG---------AEISDVHEAWRTIRAEGNN 186 (385)
T ss_dssp HHHHHTTCCSCEEECGGGT------TCHH-----HHHHHHTTCSCEEEECTT---------CCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHhcCCCEEEECcccc------cCHH-----HHHHHHhcCCeEEEECCC---------CCHHHHHHHHHHHHHCCCC
Confidence 3344444 68888887777 2333 467777889999998854 377899888887764 66
Q ss_pred ccccccccccCCCChH
Q 024709 99 DALMLSGESAMGQFPD 114 (264)
Q Consensus 99 d~~~ls~eta~G~yP~ 114 (264)
+.++|= -+-.||.
T Consensus 187 ~iiLlh---c~s~YPt 199 (385)
T 1vli_A 187 QIAIMH---CVAKYPA 199 (385)
T ss_dssp CEEEEE---ECSSSSC
T ss_pred cEEEEe---ccCCCCC
Confidence 555552 2344763
No 154
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=42.50 E-value=12 Score=32.10 Aligned_cols=74 Identities=12% Similarity=0.140 Sum_probs=50.3
Q ss_pred cCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHH-------------HHHHHHHHHhCC------CEEEEhhhhh
Q 024709 14 ESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQ-------------EKIVQLCRQLNK------PVIVASQLLE 74 (264)
Q Consensus 14 E~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~q-------------k~ii~~~~~~gk------pv~~atq~le 74 (264)
-|+.+++.|.+|.+..+.++||=| .-+..+.+..+. .++++.|+++|. |++=-
T Consensus 47 ~t~~a~~~I~~l~~~~p~~~IGAG---TVlt~~~a~~ai~AGA~fivsP~~~~evi~~~~~~~v~~~~~~~~~PG----- 118 (217)
T 3lab_A 47 RTEAGLAAISAIKKAVPEAIVGAG---TVCTADDFQKAIDAGAQFIVSPGLTPELIEKAKQVKLDGQWQGVFLPG----- 118 (217)
T ss_dssp TSTTHHHHHHHHHHHCTTSEEEEE---CCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHCSCCCEEEEE-----
T ss_pred CCccHHHHHHHHHHHCCCCeEeec---cccCHHHHHHHHHcCCCEEEeCCCcHHHHHHHHHcCCCccCCCeEeCC-----
Confidence 367888999998887666777765 222333333333 589999999999 87631
Q ss_pred hhhhCCCCChHHHHHHHHHHHhcccccccc
Q 024709 75 SMIEYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 75 SM~~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
...| +++..|...|+|.+-+-
T Consensus 119 ----~~Tp-----tE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 119 ----VATA-----SEVMIAAQAGITQLKCF 139 (217)
T ss_dssp ----ECSH-----HHHHHHHHTTCCEEEET
T ss_pred ----CCCH-----HHHHHHHHcCCCEEEEC
Confidence 1133 34578999999999664
No 155
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=42.43 E-value=62 Score=28.43 Aligned_cols=84 Identities=21% Similarity=0.263 Sum_probs=54.4
Q ss_pred HhcHHHHHhh---cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHH
Q 024709 19 LKNLNEIILA---SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELV 94 (264)
Q Consensus 19 ~~n~~eI~~~---~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v 94 (264)
..+++++++. .|.|+|+ .| +..-..++.+|-++||+|++ +.| ..+.+|..++..+.
T Consensus 69 ~~~~~~ll~~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~---------EKP~a~~~~e~~~l~~~a 128 (330)
T 4ew6_A 69 YTTIEAMLDAEPSIDAVSLC-------MP----PQYRYEAAYKALVAGKHVFL---------EKPPGATLSEVADLEALA 128 (330)
T ss_dssp ESSHHHHHHHCTTCCEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHH
T ss_pred cCCHHHHHhCCCCCCEEEEe-------CC----cHHHHHHHHHHHHcCCcEEE---------eCCCCCCHHHHHHHHHHH
Confidence 4678999876 8999996 22 45667889999999999997 555 56788877776655
Q ss_pred HhccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 95 RQQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 95 ~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
... ...+.-+....- +| +++.+++++.+
T Consensus 129 ~~~-g~~~~v~~~~r~-~p--~~~~~k~~i~~ 156 (330)
T 4ew6_A 129 NKQ-GASLFASWHSRY-AP--AVEAAKAFLAS 156 (330)
T ss_dssp HHH-TCCEEECCGGGG-ST--THHHHHHHHHS
T ss_pred Hhc-CCeEEEEehhhc-cH--HHHHHHHHHhc
Confidence 442 222222222221 23 55666666554
No 156
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=42.35 E-value=56 Score=29.10 Aligned_cols=125 Identities=12% Similarity=0.177 Sum_probs=67.3
Q ss_pred HHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChH-HHHHHHHHHHhc--cccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 52 QEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRA-EVADVSELVRQQ--ADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 52 qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptra-e~~dv~~~v~~g--~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
.+..++++++.|.|+++. .+.+. +...+..++..| +|++-+. ++.| +|....+.++.+.+...
T Consensus 83 ~~~~i~~~~~~g~~v~v~-----------~g~~~~~~~~a~~~~~~g~~~~~i~i~--~~~G-~~~~~~~~i~~lr~~~~ 148 (336)
T 1ypf_A 83 RISFIRDMQSRGLIASIS-----------VGVKEDEYEFVQQLAAEHLTPEYITID--IAHG-HSNAVINMIQHIKKHLP 148 (336)
T ss_dssp HHHHHHHHHHTTCCCEEE-----------ECCSHHHHHHHHHHHHTTCCCSEEEEE--CSSC-CSHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCCeEEEe-----------CCCCHHHHHHHHHHHhcCCCCCEEEEE--CCCC-CcHHHHHHHHHHHHhCC
Confidence 456688888889998873 12222 233444566678 8887653 3456 66666666655543221
Q ss_pred hhhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCch---------------HHHHHhhc--CC
Q 024709 129 KWCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLKASALFVYTKTGQ---------------MASLLSRS--RP 191 (264)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~aIVv~T~sG~---------------tA~~iSr~--RP 191 (264)
. +.+. ..+.. ....+..+.+.++++|++....|+ +...+... .-
T Consensus 149 ~-------------~~vi---~G~v~---s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~ 209 (336)
T 1ypf_A 149 E-------------SFVI---AGNVG---TPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA 209 (336)
T ss_dssp T-------------SEEE---EEEEC---SHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC
T ss_pred C-------------CEEE---ECCcC---CHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc
Confidence 0 0000 00010 113456677889999988555443 33333322 12
Q ss_pred CCcEEE---EcCChhhhhhcc
Q 024709 192 DCPIFA---FAPMSSVRRRLN 209 (264)
Q Consensus 192 ~~PIiA---vT~~~~~aR~L~ 209 (264)
++|||+ +..-..+++-|.
T Consensus 210 ~ipVIa~GGI~~g~Dv~kala 230 (336)
T 1ypf_A 210 SKPIIADGGIRTNGDVAKSIR 230 (336)
T ss_dssp SSCEEEESCCCSTHHHHHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHH
Confidence 789998 334445555443
No 157
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=42.31 E-value=9.8 Score=33.35 Aligned_cols=78 Identities=10% Similarity=0.148 Sum_probs=45.9
Q ss_pred ChHHHHHHHHHHHHHhCCCEEEEh-hhhhhhhh---------CC--CCChHHHHH------HHHHHHhcccccccccccc
Q 024709 47 QVPSIQEKIVQLCRQLNKPVIVAS-QLLESMIE---------YP--IPTRAEVAD------VSELVRQQADALMLSGESA 108 (264)
Q Consensus 47 ~v~~~qk~ii~~~~~~gkpv~~at-q~leSM~~---------~~--~ptrae~~d------v~~~v~~g~d~~~ls~eta 108 (264)
.+...-.++.+.+++.|.--+|+. +-+..+.. .| +|.-+...| ...++..|+|.+....-..
T Consensus 141 ~~~e~v~~~A~~a~~~G~dGvV~s~~e~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~ 220 (259)
T 3tfx_A 141 PMAEQVLSLAKMAKHSGADGVICSPLEVKKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPIT 220 (259)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEECCGGGHHHHHHHHCSSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCEEEECHHHHHHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHh
Confidence 344444556666666675533333 32222211 23 555445555 6778999999999987777
Q ss_pred CCCChHHHHHHHHHHH
Q 024709 109 MGQFPDKALAVLRSVS 124 (264)
Q Consensus 109 ~G~yP~eav~~m~~i~ 124 (264)
....|.++++.+++..
T Consensus 221 ~a~dp~~a~~~i~~~~ 236 (259)
T 3tfx_A 221 LASDPKAAYEAIKKEF 236 (259)
T ss_dssp TSSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 7889999998877643
No 158
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=42.30 E-value=41 Score=27.58 Aligned_cols=52 Identities=17% Similarity=0.278 Sum_probs=37.4
Q ss_pred cCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHH-------HhCCCEEEEh
Q 024709 14 ESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCR-------QLNKPVIVAS 70 (264)
Q Consensus 14 E~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~-------~~gkpv~~at 70 (264)
+.++.+..+-+-++.+||++|+--..--. ++-+-|..++-+- -.|||+++.+
T Consensus 53 ~~p~~~~~l~~~i~~aD~~ii~tPeYn~s-----~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~ 111 (190)
T 3u7r_A 53 DAPESVLRLKDRIEHSDAVLAITPEYNRS-----YPGMIKNAIDWATRPYGQNSWKGKPAAVIG 111 (190)
T ss_dssp GCCHHHHHHHHHHHTSSEEEEECCCBTTB-----CCHHHHHHHHHHHCSTTCCTTTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHhCCcEEEechhhccc-----CCHHHHHHHHHhcccccCCccCCCEEEEEE
Confidence 35678888888899999999985555444 4456677776653 3689998753
No 159
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=42.21 E-value=1.1e+02 Score=28.88 Aligned_cols=66 Identities=23% Similarity=0.260 Sum_probs=43.6
Q ss_pred HHHhcHHHHHhh-cceeee--cCCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHH
Q 024709 17 DSLKNLNEIILA-SDGAMV--ARGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVS 91 (264)
Q Consensus 17 ~~~~n~~eI~~~-~Dgi~i--~rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~ 91 (264)
+..+.++..++. +|+|.+ +-|+. ....++++.+++. +.|++.-+ ..+. .+..
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~----------~~~~~~i~~i~~~~~~~pvi~~~----------v~t~---~~a~ 311 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNS----------VYQIAMVHYIKQKYPHLQVIGGN----------VVTA---AQAK 311 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCS----------HHHHHHHHHHHHHCTTCEEEEEE----------ECSH---HHHH
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcc----------hhHHHHHHHHHHhCCCCceEecc----------cchH---HHHH
Confidence 346666777777 999998 43332 3445677777777 89998632 1222 2346
Q ss_pred HHHHhccccccccc
Q 024709 92 ELVRQQADALMLSG 105 (264)
Q Consensus 92 ~~v~~g~d~~~ls~ 105 (264)
.+...|+|++.++.
T Consensus 312 ~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 312 NLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHHTCSEEEECS
T ss_pred HHHHcCCCEEEECC
Confidence 77889999998854
No 160
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=42.09 E-value=48 Score=28.07 Aligned_cols=53 Identities=8% Similarity=0.040 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHH
Q 024709 51 IQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSV 123 (264)
Q Consensus 51 ~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i 123 (264)
.-+..++.|+++|++|.+=| .-+ ..+...+...|+|+++- +||..+.+.+.++
T Consensus 192 ~~~~~v~~~~~~G~~V~~WT----------vn~---~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~ 244 (250)
T 3ks6_A 192 ADAGLMAQVQAAGLDFGCWA----------AHT---PSQITKALDLGVKVFTT-------DRPTLAIALRTEH 244 (250)
T ss_dssp CCHHHHHHHHHTTCEEEEEC----------CCS---HHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEe----------CCC---HHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHh
Confidence 34688999999999999866 111 23456788899999885 4898887777654
No 161
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=42.05 E-value=42 Score=29.89 Aligned_cols=85 Identities=14% Similarity=0.119 Sum_probs=44.8
Q ss_pred cceEEEec-cCHHHHhcHHHHHhh-cceeeec-CCCc--------------c--cCCCCCChHHHHHHHHHHHHHhCCCE
Q 024709 6 NIAVIAKI-ESIDSLKNLNEIILA-SDGAMVA-RGDL--------------G--AQVPLEQVPSIQEKIVQLCRQLNKPV 66 (264)
Q Consensus 6 ~~~iiakI-E~~~~~~n~~eI~~~-~Dgi~i~-rgdL--------------~--~~~~~~~v~~~qk~ii~~~~~~gkpv 66 (264)
++.|+.|+ -.-...+......+. +|+|.+. .|.- . ...+.. -+...+++.+.+ .+.|+
T Consensus 178 ~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~-~~~~l~~v~~~~--~~ipv 254 (349)
T 1p0k_A 178 SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGIS-TAASLAEIRSEF--PASTM 254 (349)
T ss_dssp SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCC-HHHHHHHHHHHC--TTSEE
T ss_pred CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCcc-HHHHHHHHHHhc--CCCeE
Confidence 46788886 111112334444445 9999994 2210 0 112222 223333333321 26888
Q ss_pred EEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccc
Q 024709 67 IVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 67 ~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
|.... .-+ -.|+..++..|+|+|++..
T Consensus 255 ia~GG---------I~~---~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 255 IASGG---------LQD---ALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp EEESS---------CCS---HHHHHHHHHTTCSEEEECH
T ss_pred EEECC---------CCC---HHHHHHHHHcCCCEEEEcH
Confidence 87442 222 3577899999999999974
No 162
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=41.87 E-value=93 Score=22.22 Aligned_cols=74 Identities=14% Similarity=0.192 Sum_probs=43.0
Q ss_pred HHHHhcCCcEEEEEcC---------Cch-HHHHHhhcCCCCcEEEEcCChhhhhh-cccccccEEEEecCCCCHHHHHHH
Q 024709 163 KIANKLKASALFVYTK---------TGQ-MASLLSRSRPDCPIFAFAPMSSVRRR-LNLQWGLVPFCLNFSDDMESNLNQ 231 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T~---------sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~-L~L~~GV~P~~~~~~~~~e~~i~~ 231 (264)
....+.+.+.|++-.. +|. ..+.+.+..|.+||+.+|........ -.+..|+.-++..+. +.++ +..
T Consensus 41 ~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~-~~~~-l~~ 118 (140)
T 2qr3_A 41 TVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVVKPW-DNQK-LLE 118 (140)
T ss_dssp HHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEEESC-CHHH-HHH
T ss_pred HHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheeeCCC-CHHH-HHH
Confidence 3444556776666432 232 34556666799999999987654322 235568887776543 3444 344
Q ss_pred HHHHHHH
Q 024709 232 TFSLLKA 238 (264)
Q Consensus 232 al~~~~~ 238 (264)
+++.+.+
T Consensus 119 ~l~~~~~ 125 (140)
T 2qr3_A 119 TLLNAAS 125 (140)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 4554444
No 163
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=41.74 E-value=49 Score=28.84 Aligned_cols=62 Identities=15% Similarity=0.194 Sum_probs=41.2
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccc
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADA 100 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~ 100 (264)
+++-.+. +|||+++-.||. +.-.+++++.|++.|..+++.+ -|..| +..+...|+|.
T Consensus 128 v~~A~~~GAD~VlLi~a~l~--------~~~l~~l~~~a~~lGl~~lvev-----------~t~ee---~~~A~~~Gad~ 185 (272)
T 3qja_A 128 IHEARAHGADMLLLIVAALE--------QSVLVSMLDRTESLGMTALVEV-----------HTEQE---ADRALKAGAKV 185 (272)
T ss_dssp HHHHHHTTCSEEEEEGGGSC--------HHHHHHHHHHHHHTTCEEEEEE-----------SSHHH---HHHHHHHTCSE
T ss_pred HHHHHHcCCCEEEEecccCC--------HHHHHHHHHHHHHCCCcEEEEc-----------CCHHH---HHHHHHCCCCE
Confidence 3444444 788887656663 3345678899999999988743 12233 34566789999
Q ss_pred ccccc
Q 024709 101 LMLSG 105 (264)
Q Consensus 101 ~~ls~ 105 (264)
+-.++
T Consensus 186 IGv~~ 190 (272)
T 3qja_A 186 IGVNA 190 (272)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 88874
No 164
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=41.59 E-value=98 Score=22.40 Aligned_cols=54 Identities=6% Similarity=0.044 Sum_probs=34.0
Q ss_pred cCCcEEEEEcC-----Cch-HHHHHhhcCCCCcEEEEcCChhhhhh-cccccccEEEEecCC
Q 024709 168 LKASALFVYTK-----TGQ-MASLLSRSRPDCPIFAFAPMSSVRRR-LNLQWGLVPFCLNFS 222 (264)
Q Consensus 168 l~A~aIVv~T~-----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~-L~L~~GV~P~~~~~~ 222 (264)
...+.|++-.. +|. ..+.+.++ |.+|||++|........ -.+..|+.-++.++.
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~ 109 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQI-SELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSA 109 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHH-CCCCEEEEESSSSCCCCGGGGGSCEEEEEETTC
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhC-CCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCC
Confidence 56787777533 332 34445444 89999999987664322 234568888877653
No 165
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=41.42 E-value=93 Score=22.09 Aligned_cols=74 Identities=12% Similarity=0.085 Sum_probs=43.1
Q ss_pred HHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHHHHHH
Q 024709 165 ANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFSLLKA 238 (264)
Q Consensus 165 A~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~ 238 (264)
..+.+.+.|++-.. +|. ..+.+.+..|..||+.+|....... .-.+..|+.-++.++. +.++ +..+++.+.+
T Consensus 42 ~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~-~~~~-l~~~i~~~~~ 119 (134)
T 3f6c_A 42 VETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKE-GMNN-IIAAIEAAKN 119 (134)
T ss_dssp HHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGGG-CTHH-HHHHHHHHHT
T ss_pred HHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCC-CHHH-HHHHHHHHHC
Confidence 34456787777543 343 4556666779999999998776422 2235678888777653 3333 4445555554
Q ss_pred cC
Q 024709 239 RG 240 (264)
Q Consensus 239 ~g 240 (264)
.+
T Consensus 120 ~~ 121 (134)
T 3f6c_A 120 GY 121 (134)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 166
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=41.29 E-value=17 Score=28.81 Aligned_cols=34 Identities=6% Similarity=0.245 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCChh
Q 024709 169 KASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMSS 203 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~~ 203 (264)
.-+.+|++|.||+|...+ +|- -.+|++++|.+..
T Consensus 96 ~~d~vI~iS~sG~t~~~~~~~~~ak~-~g~~vi~IT~~~~ 134 (183)
T 2xhz_A 96 PQDVVIAISNSGESSEITALIPVLKR-LHVPLICITGRPE 134 (183)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHT-TTCCEEEEESCTT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 347899999999987655 333 3689999998763
No 167
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=41.28 E-value=25 Score=28.49 Aligned_cols=54 Identities=15% Similarity=0.181 Sum_probs=37.1
Q ss_pred HHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccc
Q 024709 23 NEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADAL 101 (264)
Q Consensus 23 ~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~ 101 (264)
++-.+. +|.| ++++- + ..+++.|+++|+|++.- ..|. +++..+...|+|.+
T Consensus 77 ~~a~~~Gad~i-v~~~~-----~--------~~~~~~~~~~g~~vi~g-----------~~t~---~e~~~a~~~Gad~v 128 (205)
T 1wa3_A 77 RKAVESGAEFI-VSPHL-----D--------EEISQFCKEKGVFYMPG-----------VMTP---TELVKAMKLGHTIL 128 (205)
T ss_dssp HHHHHHTCSEE-ECSSC-----C--------HHHHHHHHHHTCEEECE-----------ECSH---HHHHHHHHTTCCEE
T ss_pred HHHHHcCCCEE-EcCCC-----C--------HHHHHHHHHcCCcEECC-----------cCCH---HHHHHHHHcCCCEE
Confidence 333334 8988 77662 1 46889999999999852 1232 24578899999998
Q ss_pred ccc
Q 024709 102 MLS 104 (264)
Q Consensus 102 ~ls 104 (264)
-+.
T Consensus 129 k~~ 131 (205)
T 1wa3_A 129 KLF 131 (205)
T ss_dssp EET
T ss_pred EEc
Confidence 764
No 168
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=41.27 E-value=17 Score=31.80 Aligned_cols=37 Identities=16% Similarity=0.268 Sum_probs=27.8
Q ss_pred CCcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCChhhhh
Q 024709 169 KASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMSSVRR 206 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~~~aR 206 (264)
.-+.+|++|.||.|...+. |-+ .++++++|++..++|
T Consensus 79 ~~dlvI~iS~SG~T~e~~~a~~~ak~~-g~~~iaIT~~~~La~ 120 (302)
T 1tzb_A 79 RDGLLIAVSYSGNTIETLYTVEYAKRR-RIPAVAITTGGRLAQ 120 (302)
T ss_dssp SSSEEEEECSSSCCHHHHHHHHHHHHT-TCCEEEEESSTTGGG
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCeEEEECCCchHHH
Confidence 4568999999999876553 433 689999999984444
No 169
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=41.17 E-value=56 Score=29.20 Aligned_cols=88 Identities=13% Similarity=0.106 Sum_probs=59.5
Q ss_pred eeecCCCccc----CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHH-Hhcccccccccc
Q 024709 32 AMVARGDLGA----QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELV-RQQADALMLSGE 106 (264)
Q Consensus 32 i~i~rgdL~~----~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v-~~g~d~~~ls~e 106 (264)
++++=.|+-. ....++.....+.+++.|+++|+.|.+... ...+-+...+-+++..+ ..|+|.+.|. +
T Consensus 100 i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-D 172 (325)
T 3eeg_A 100 TGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVNIP-D 172 (325)
T ss_dssp EEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEECC-B
T ss_pred EEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHHHHhcCCCEEEec-C
Confidence 4555555422 334577777788999999999999876432 11223334455666654 4599999997 8
Q ss_pred ccCCCChHHHHHHHHHHHHH
Q 024709 107 SAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 107 ta~G~yP~eav~~m~~i~~~ 126 (264)
|.=...|.+.-+.+..+.++
T Consensus 173 T~G~~~P~~v~~lv~~l~~~ 192 (325)
T 3eeg_A 173 TTGYMLPWQYGERIKYLMDN 192 (325)
T ss_dssp SSSCCCHHHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHHHh
Confidence 98899999888877776543
No 170
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=41.10 E-value=1.5e+02 Score=25.61 Aligned_cols=124 Identities=15% Similarity=0.244 Sum_probs=68.7
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.|+.+- .|.......+...-..|++.+....+. .| -++.+...++..+
T Consensus 80 ~alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~l~~~------ 138 (313)
T 2q3b_A 80 IALAMVCAARGYRCVLT-----------MPETMSLERRMLLRAYGAELILTPGAD---GM-SGAIAKAEELAKT------ 138 (313)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHH------
T ss_pred HHHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEeCCCC---CH-HHHHHHHHHHHHh------
Confidence 34677788899998872 122111223345556799987765431 12 2444443333221
Q ss_pred cccccccCCCCCCCCCCCCCchHH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGE-ICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~a-IA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
... .++..+. .. +.. ... -...+.++.++++ .+.||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 139 -~~~--~~~~~~~-~n-~~~-~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 210 (313)
T 2q3b_A 139 -DQR--YFVPQQF-EN-PAN-PAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAAS 210 (313)
T ss_dssp -CTT--EECCCTT-TC-THH-HHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTS
T ss_pred -CCC--EEeCCCC-CC-hhh-HHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCC
Confidence 110 0111221 10 111 111 2233667777774 6899999999998766554 469999999987653
No 171
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=41.04 E-value=61 Score=28.86 Aligned_cols=85 Identities=15% Similarity=0.114 Sum_probs=54.9
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- .|+|+|+ .| ......++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 77 ~~~~~~ll~~~~vD~V~I~-------tp----~~~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~ 136 (361)
T 3u3x_A 77 IATAEEILEDENIGLIVSA-------AV----SSERAELAIRAMQHGKDVLV---------DKPGMTSFDQLAKLRRVQA 136 (361)
T ss_dssp ESCHHHHHTCTTCCEEEEC-------CC----HHHHHHHHHHHHHTTCEEEE---------ESCSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEe-------CC----hHHHHHHHHHHHHCCCeEEE---------eCCCCCCHHHHHHHHHHHH
Confidence 4678999986 8999996 22 34567888899999999997 666 678888877777655
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
. ....+.-+..-.-.+| .++.+++++.+
T Consensus 137 ~-~g~~l~v~~~~R~~~p--~~~~~k~~i~~ 164 (361)
T 3u3x_A 137 E-TGRIFSILYSEHFESP--ATVKAGELVAA 164 (361)
T ss_dssp T-TCCCEEEECHHHHTCH--HHHHHHHHHHT
T ss_pred H-cCCEEEEechHhhCCH--HHHHHHHHHHc
Confidence 4 2222222221111124 56666666543
No 172
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=40.82 E-value=35 Score=29.86 Aligned_cols=44 Identities=23% Similarity=0.427 Sum_probs=34.3
Q ss_pred hcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 20 KNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 20 ~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
+-.+|+.+.+|++.|..|-|. ++-........+.++++|||+++
T Consensus 48 ~E~~e~~~~a~al~iNiGtl~-----~~~~~~m~~A~~~A~~~~~PvVL 91 (265)
T 3hpd_A 48 EELEEMIRLADAVVINIGTLD-----SGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp TTHHHHHHHCSEEEEECTTCC-----HHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHCCeEEEECCCCC-----hHHHHHHHHHHHHHHHcCCCEEE
Confidence 567889999999999877652 33444556677899999999997
No 173
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=40.78 E-value=1.2e+02 Score=25.50 Aligned_cols=74 Identities=12% Similarity=0.018 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecC--CCC-
Q 024709 157 ICNGAAKIANKLKASALFVYTKT---------GQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNF--SDD- 224 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~s---------G~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~--~~~- 224 (264)
.+....+.|.+.+++.||+-++. |+++..+.+.-| ||++.+-+... .....+++.. +.+
T Consensus 99 ~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv~~~~~--------~~~~~Ilva~D~s~~~ 169 (319)
T 3olq_A 99 PYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCP-APVWMVKDKEW--------PEYGTIVVAANLSNEE 169 (319)
T ss_dssp HHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCS-SCEEEEESSCC--------CTTCEEEEECCCSCCS
T ss_pred hHHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCC-CCEEEecCccc--------ccCCeEEEEECCCCcc
Confidence 34455667778899988887753 677887776654 99999876541 1233455543 221
Q ss_pred ------HHHHHHHHHHHHHHc
Q 024709 225 ------MESNLNQTFSLLKAR 239 (264)
Q Consensus 225 ------~e~~i~~al~~~~~~ 239 (264)
....+..+..++...
T Consensus 170 ~~~~~~s~~al~~a~~la~~~ 190 (319)
T 3olq_A 170 SYHDALNLKLIELTNDLSHRI 190 (319)
T ss_dssp THHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhc
Confidence 245567777777664
No 174
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=40.56 E-value=90 Score=27.62 Aligned_cols=100 Identities=15% Similarity=0.073 Sum_probs=58.3
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCCCC---CChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHH-HH
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQVPL---EQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVA-DV 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~~---~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~-dv 90 (264)
++++++ +-.++. +||+++. | -+.|.+. ++-..+.+..++.++. ..||++-+ ...+-.|.- -.
T Consensus 45 ~~l~~lv~~li~~Gv~Gi~v~-G-tTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~~t~~ai~la 112 (315)
T 3na8_A 45 PALGRSIERLIDGGVHAIAPL-G-STGEGAYLSDPEWDEVVDFTLKTVAH-RVPTIVSV---------SDLTTAKTVRRA 112 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECS-S-GGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-c-cccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHH
Confidence 444443 445555 8999984 2 2223332 3333333444444332 47998854 344445543 44
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 113 ~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 150 (315)
T 3na8_A 113 QFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIG 150 (315)
T ss_dssp HHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 45667899999997655555456777788888876654
No 175
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=40.56 E-value=60 Score=28.73 Aligned_cols=69 Identities=9% Similarity=0.068 Sum_probs=45.2
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhh-------cccccccEEEEecCCCCHHHHHHHHH
Q 024709 164 IANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRR-------LNLQWGLVPFCLNFSDDMESNLNQTF 233 (264)
Q Consensus 164 lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~-------L~L~~GV~P~~~~~~~~~e~~i~~al 233 (264)
.-.+.+|.+|++--..-..++.+++-= ++|+|.+-.-..+=-| |.++.|-.|-+.+...+..+.+..++
T Consensus 187 a~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igIGaG~~~dgQvLV~~D~lG~~~~~~pkf~k~y~~~~~~~~~a~ 262 (281)
T 1oy0_A 187 AVAEAGAFAVVMEMVPAELATQITGKL-TIPTVGIGAGPNCDGQVLVWQDMAGFSGAKTARFVKRYADVGGELRRAA 262 (281)
T ss_dssp HHHHHTCSEEEEESCCHHHHHHHHHHC-SSCEEEESSCSCSSEEEECHHHHTTCSCSCCCTTCCCCCCHHHHHHHHH
T ss_pred HHHHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEeCCCCCCCcceeeHhhhcCCCCCCCCCchhhhhhhHHHHHHHH
Confidence 445568999888765556777777654 4899998766655444 44555656655555566666666665
No 176
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=40.33 E-value=50 Score=30.10 Aligned_cols=110 Identities=19% Similarity=0.214 Sum_probs=60.9
Q ss_pred CcceEEEeccCHHHHhcHHHHHhh-----cceeeec-----CCCc-----ccCCCC---CChHHHHHHHHHHHH-Hh--C
Q 024709 5 VNIAVIAKIESIDSLKNLNEIILA-----SDGAMVA-----RGDL-----GAQVPL---EQVPSIQEKIVQLCR-QL--N 63 (264)
Q Consensus 5 ~~~~iiakIE~~~~~~n~~eI~~~-----~Dgi~i~-----rgdL-----~~~~~~---~~v~~~qk~ii~~~~-~~--g 63 (264)
.+..|+.||=--...+++.+|++. +|||.+. |-++ +.+.+- +.+...--++++..+ .. .
T Consensus 219 ~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ 298 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGR 298 (367)
T ss_dssp GCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTC
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCC
Confidence 457889998532222355556554 8999874 2111 111111 223322334444444 44 6
Q ss_pred CCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccC-CCChHHHHHHHHHHHHHHHhhhh
Q 024709 64 KPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAM-GQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 64 kpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~-G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.|+|....+- | ..|+..++..|+|+|++..--.. | | .+..+|.++-+.++.
T Consensus 299 ipvI~~GGI~---------s---~~da~~~l~~GAd~V~vgra~l~~g--P----~~~~~i~~~l~~~m~ 350 (367)
T 3zwt_A 299 VPIIGVGGVS---------S---GQDALEKIRAGASLVQLYTALTFWG--P----PVVGKVKRELEALLK 350 (367)
T ss_dssp SCEEEESSCC---------S---HHHHHHHHHHTCSEEEESHHHHHHC--T----HHHHHHHHHHHHHHH
T ss_pred ceEEEECCCC---------C---HHHHHHHHHcCCCEEEECHHHHhcC--c----HHHHHHHHHHHHHHH
Confidence 8999855322 2 35678888899999999744311 2 3 355666666666554
No 177
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=40.31 E-value=38 Score=28.71 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHH
Q 024709 52 QEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLR 121 (264)
Q Consensus 52 qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~ 121 (264)
-+..++.|+++|++|.+=| .- +..+...++..|+|+++- +||-.+.+.+.
T Consensus 199 ~~~~v~~~~~~G~~v~~WT----------vn---~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 248 (252)
T 3qvq_A 199 DVQQVSDIKAAGYKVLAFT----------IN---DESLALKLYNQGLDAVFS-------DYPQKIQSAID 248 (252)
T ss_dssp CHHHHHHHHHTTCEEEEEC----------CC---CHHHHHHHHHTTCCEEEE-------SSHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEc----------CC---CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 4688999999999999866 11 223456788899999886 47877766654
No 178
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=40.28 E-value=1.3e+02 Score=26.45 Aligned_cols=100 Identities=18% Similarity=0.069 Sum_probs=55.5
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCCC---CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHH-HHH
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQVP---LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEV-ADV 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~---~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~-~dv 90 (264)
++++++ +-.++. +||+++. | =+.|.+ .++-..+.+..++.++ -..||++.| ...+-.|. .-.
T Consensus 29 ~~l~~lv~~li~~Gv~gl~v~-G-tTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la 96 (309)
T 3fkr_A 29 ASQKRAVDFMIDAGSDGLCIL-A-NFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTT---------SHYSTQVCAARS 96 (309)
T ss_dssp HHHHHHHHHHHHTTCSCEEES-S-GGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-c-cccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCchHHHHHHHH
Confidence 444443 445555 9999994 2 222332 2333333333333332 247999855 34444454 444
Q ss_pred HHHHHhcccccccccccc---CCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESA---MGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta---~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=-- ...-+-+.++..+.|+..+.
T Consensus 97 ~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~ 137 (309)
T 3fkr_A 97 LRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIA 137 (309)
T ss_dssp HHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 557778999999975311 12235677777788776654
No 179
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=40.08 E-value=42 Score=31.43 Aligned_cols=63 Identities=17% Similarity=0.267 Sum_probs=41.0
Q ss_pred cceeeecCCCccc-------CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccc
Q 024709 29 SDGAMVARGDLGA-------QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADAL 101 (264)
Q Consensus 29 ~Dgi~i~rgdL~~-------~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~ 101 (264)
+|+|.++-|-=+. ..+.+. ......+.+.++..+.|+|.+..+- .-.|+..++..|+|+|
T Consensus 300 ~d~I~v~~~~G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~GGI~------------~~~di~kala~GAd~V 366 (494)
T 1vrd_A 300 ADAVKVGVGPGSICTTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIADGGIR------------YSGDIVKALAAGAESV 366 (494)
T ss_dssp CSEEEECSSCSTTCHHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEE
T ss_pred CCEEEEcCCCCccccccccCCCCccH-HHHHHHHHHHHhhcCCCEEEECCcC------------CHHHHHHHHHcCCCEE
Confidence 8999995432110 012222 3445566666777799999865432 2357899999999999
Q ss_pred ccc
Q 024709 102 MLS 104 (264)
Q Consensus 102 ~ls 104 (264)
++.
T Consensus 367 ~iG 369 (494)
T 1vrd_A 367 MVG 369 (494)
T ss_dssp EES
T ss_pred EEC
Confidence 986
No 180
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=40.01 E-value=1e+02 Score=22.19 Aligned_cols=77 Identities=13% Similarity=0.102 Sum_probs=43.5
Q ss_pred HHHHhcCCcEEEEEc----CCch-HHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCCC--CHHHHHHHHHHH
Q 024709 163 KIANKLKASALFVYT----KTGQ-MASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSD--DMESNLNQTFSL 235 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T----~sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~--~~e~~i~~al~~ 235 (264)
....+...+.|++-- .+|. ..+.+.+..|..||+.+|.......+ .+..|+.-++.++.. .....+..+++.
T Consensus 49 ~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~-~~~~g~~~~l~KP~~~~~l~~~i~~~~~~ 127 (143)
T 2qv0_A 49 KFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVE-AFELEAFDYILKPYQESRIINMLQKLTTA 127 (143)
T ss_dssp HHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCTTHHH-HHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHHHHHH-HHhCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 334455677666643 2343 34556666677889999987554433 356788887776432 222334445544
Q ss_pred HHHcC
Q 024709 236 LKARG 240 (264)
Q Consensus 236 ~~~~g 240 (264)
..+.+
T Consensus 128 ~~~~~ 132 (143)
T 2qv0_A 128 WEQQN 132 (143)
T ss_dssp HHHC-
T ss_pred HHhcc
Confidence 44433
No 181
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=39.98 E-value=53 Score=27.78 Aligned_cols=50 Identities=18% Similarity=0.103 Sum_probs=34.4
Q ss_pred hCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 62 LNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 62 ~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.+.|++... ..-|. .|+..+...|+|+++.. ++..+ |-+..+.+.+.+++
T Consensus 180 ~~ipvIA~G---------GI~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~~~i~~ 229 (232)
T 3igs_A 180 AGCRVIAEG---------RYNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWYNDALKK 229 (232)
T ss_dssp TTCCEEEES---------CCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHHHHHH
T ss_pred cCCcEEEEC---------CCCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHHHHHHH
Confidence 389998744 33333 46677788899999997 45554 87777777665543
No 182
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=39.94 E-value=1.8e+02 Score=24.95 Aligned_cols=140 Identities=16% Similarity=0.064 Sum_probs=0.0
Q ss_pred CcccCCCCCChHHHHHHHHHHHHHhCCC-EEEEhhhhhhhhh-----------------CCCCChHHHHHHHHHHHhccc
Q 024709 38 DLGAQVPLEQVPSIQEKIVQLCRQLNKP-VIVASQLLESMIE-----------------YPIPTRAEVADVSELVRQQAD 99 (264)
Q Consensus 38 dL~~~~~~~~v~~~qk~ii~~~~~~gkp-v~~atq~leSM~~-----------------~~~ptrae~~dv~~~v~~g~d 99 (264)
|+++ +....-..-.+++++.++++|-. |.+--.++.--.. .+.|+...+..+..|+.+|+|
T Consensus 32 DhTl-L~p~~t~~~i~~lc~eA~~~~~~aVcV~p~~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAd 110 (239)
T 3ngj_A 32 DHTL-LKADATEEQIRKLCSEAAEYKFASVCVNPTWVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAE 110 (239)
T ss_dssp EEEE-CCTTCCHHHHHHHHHHHHHHTCSEEEECGGGHHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCS
T ss_pred Cccc-CCCCCCHHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCC
Q ss_pred cccccccccC---CCChHHHHHHHHHHHHHHH----hhhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcE
Q 024709 100 ALMLSGESAM---GQFPDKALAVLRSVSLRIE----KWCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLKASA 172 (264)
Q Consensus 100 ~~~ls~eta~---G~yP~eav~~m~~i~~~~E----~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~a 172 (264)
.+=.---... |+|.. ..+-+..+...+. +...+.. .+.+.-...++++|.+.+|+
T Consensus 111 EIDmViNig~lk~g~~~~-v~~eI~~v~~a~~~~~lKVIlEt~----------------~Lt~eei~~a~~ia~~aGAD- 172 (239)
T 3ngj_A 111 EVDMVINIGMVKAKKYDD-VEKDVKAVVDASGKALTKVIIECC----------------YLTNEEKVEVCKRCVAAGAE- 172 (239)
T ss_dssp EEEEECCHHHHHTTCHHH-HHHHHHHHHHHHTTSEEEEECCGG----------------GSCHHHHHHHHHHHHHHTCS-
T ss_pred EEEEEeehHHhccccHHH-HHHHHHHHHHHhcCCceEEEEecC----------------CCCHHHHHHHHHHHHHHCcC-
Q ss_pred EEEEcCCchH---------HHHHhhcCCCCcEEE
Q 024709 173 LFVYTKTGQM---------ASLLSRSRPDCPIFA 197 (264)
Q Consensus 173 IVv~T~sG~t---------A~~iSr~RP~~PIiA 197 (264)
++=|.||.+ ..+-....++++|.|
T Consensus 173 -fVKTSTGf~~ggAt~~dv~lmr~~vg~~v~VKa 205 (239)
T 3ngj_A 173 -YVKTSTGFGTHGATPEDVKLMKDTVGDKALVKA 205 (239)
T ss_dssp -EEECCCSSSSCCCCHHHHHHHHHHHGGGSEEEE
T ss_pred -EEECCCCCCCCCCCHHHHHHHHHhhCCCceEEE
No 183
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=39.45 E-value=90 Score=27.02 Aligned_cols=126 Identities=14% Similarity=0.191 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhh
Q 024709 51 IQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKW 130 (264)
Q Consensus 51 ~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~ 130 (264)
.=.-+...|++.|.++.+- .|.......+...-..|++.+...++. .| -++.+...++..+-. +
T Consensus 76 ~g~a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~l~~~~~-~ 139 (308)
T 2egu_A 76 TGIGLAMVAAAKGYKAVLV-----------MPDTMSLERRNLLRAYGAELVLTPGAQ---GM-RGAIAKAEELVREHG-Y 139 (308)
T ss_dssp HHHHHHHHHHHHTCEEEEE-----------EESCSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHHC-C
T ss_pred HHHHHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHHCc-C
Confidence 3345778889999998872 121111223345566899987765431 12 355555444433211 1
Q ss_pred hhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCChh
Q 024709 131 CREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMSS 203 (264)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~~ 203 (264)
++..+... +..+..-....+.++.++++ .+.||+.+-+|.++--+++ ..|...|+++.+...
T Consensus 140 ---------~~~~~~~n--~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~ 207 (308)
T 2egu_A 140 ---------FMPQQFKN--EANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADS 207 (308)
T ss_dssp ---------BCC----------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-
T ss_pred ---------CcCCcCCC--hhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 11111110 11110112223455666664 6899999999998766553 569999999987654
No 184
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=39.32 E-value=57 Score=25.13 Aligned_cols=45 Identities=11% Similarity=0.294 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHhhcCCCCcEEEEcCCh
Q 024709 157 ICNGAAKIANKLKASALFVYTKT---------GQMASLLSRSRPDCPIFAFAPMS 202 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~s---------G~tA~~iSr~RP~~PIiAvT~~~ 202 (264)
.+....+.|.+.+++.||+-++. |+++..+.+.-| ||++.+-++.
T Consensus 112 ~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv~~~~ 165 (175)
T 2gm3_A 112 PKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTIKRNA 165 (175)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEEECCG
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEEcCCc
Confidence 34556677889999988888752 456777777655 9999987654
No 185
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=39.24 E-value=64 Score=27.75 Aligned_cols=64 Identities=9% Similarity=0.008 Sum_probs=41.3
Q ss_pred HHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccc
Q 024709 22 LNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADAL 101 (264)
Q Consensus 22 ~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~ 101 (264)
+++.++-+|.+++. |.|. ...-.....++++.+++.|+|+++ .|.... +...+...+|.+
T Consensus 127 ~~~~~~~~~~v~~~-g~~~----~~~~~~~~~~~~~~a~~~g~~v~~------------D~~~~~---l~~~l~~~~dil 186 (320)
T 3ie7_A 127 IAKKVKKEDMVVIA-GSPP----PHYTLSDFKELLRTVKATGAFLGC------------DNSGEY---LNLAVEMGVDFI 186 (320)
T ss_dssp HHHHCCTTCEEEEE-SCCC----TTCCHHHHHHHHHHHHHHTCEEEE------------ECCHHH---HHHHHHHCCSEE
T ss_pred HHHHhcCCCEEEEe-CCCC----CCCCHHHHHHHHHHHHhcCCEEEE------------ECChHH---HHHHHhcCCeEE
Confidence 34555668999984 4342 222346788999999999999997 444322 233344478877
Q ss_pred cccc
Q 024709 102 MLSG 105 (264)
Q Consensus 102 ~ls~ 105 (264)
..+.
T Consensus 187 ~~N~ 190 (320)
T 3ie7_A 187 KPNE 190 (320)
T ss_dssp CCBT
T ss_pred eeCH
Confidence 7763
No 186
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=39.22 E-value=17 Score=28.86 Aligned_cols=34 Identities=12% Similarity=0.136 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCChh
Q 024709 169 KASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMSS 203 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~~ 203 (264)
.-+.+|++|.||.|...+ +|-| .+|++++|.+..
T Consensus 87 ~~d~~i~iS~sG~t~~~~~~~~~ak~~-g~~vi~IT~~~~ 125 (187)
T 3sho_A 87 PTDLMIGVSVWRYLRDTVAALAGAAER-GVPTMALTDSSV 125 (187)
T ss_dssp TTEEEEEECCSSCCHHHHHHHHHHHHT-TCCEEEEESCTT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 347899999999986644 3333 699999998643
No 187
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=39.19 E-value=54 Score=28.86 Aligned_cols=60 Identities=22% Similarity=0.152 Sum_probs=38.7
Q ss_pred hcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcc
Q 024709 20 KNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQA 98 (264)
Q Consensus 20 ~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~ 98 (264)
+.++.+++. +|+|.++-|+ | ..+++.+++.|.|++... .+. .+...+...|+
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~-----p--------~~~~~~l~~~gi~vi~~v-----------~t~---~~a~~~~~~Ga 139 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGND-----P--------GEHIAEFRRHGVKVIHKC-----------TAV---RHALKAERLGV 139 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESC-----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTC
T ss_pred HHHHHHHhcCCCEEEEcCCC-----c--------HHHHHHHHHcCCCEEeeC-----------CCH---HHHHHHHHcCC
Confidence 344555555 7888776332 2 356778888899998521 122 23456788999
Q ss_pred cccccccc
Q 024709 99 DALMLSGE 106 (264)
Q Consensus 99 d~~~ls~e 106 (264)
|++.+.+=
T Consensus 140 D~i~v~g~ 147 (328)
T 2gjl_A 140 DAVSIDGF 147 (328)
T ss_dssp SEEEEECT
T ss_pred CEEEEECC
Confidence 99999653
No 188
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=39.14 E-value=32 Score=25.33 Aligned_cols=41 Identities=2% Similarity=-0.102 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEE
Q 024709 157 ICNGAAKIANKLKASALFVYTKTGQMASLLSRSRPDCPIFAF 198 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAv 198 (264)
.+....+.|.+.+++.||+-++.-+++..+.+.-| ||++.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 34455678889999977776663356666666555 888764
No 189
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=39.07 E-value=72 Score=26.86 Aligned_cols=38 Identities=13% Similarity=0.192 Sum_probs=28.2
Q ss_pred HHHhcCCcEEEEEcCC---------chHHHHHhhcCCCCcEEEEcCCh
Q 024709 164 IANKLKASALFVYTKT---------GQMASLLSRSRPDCPIFAFAPMS 202 (264)
Q Consensus 164 lA~~l~A~aIVv~T~s---------G~tA~~iSr~RP~~PIiAvT~~~ 202 (264)
.+.+.+++.||+-++. |+++..+.+.-| ||++.+-+..
T Consensus 118 ~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv~~~~ 164 (294)
T 3loq_A 118 IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK-VPVYIFKHDM 164 (294)
T ss_dssp HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS-SCEEEECCCT
T ss_pred eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC-CCEEEecCcc
Confidence 7888999988877653 445666666666 9999987765
No 190
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=39.03 E-value=52 Score=23.41 Aligned_cols=67 Identities=10% Similarity=0.088 Sum_probs=38.6
Q ss_pred CcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhh------hhhcccccccEEEEecCCCCHHHHHHHHHHHHHH
Q 024709 170 ASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSV------RRRLNLQWGLVPFCLNFSDDMESNLNQTFSLLKA 238 (264)
Q Consensus 170 A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~------aR~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~ 238 (264)
.+.|++-.. +|. ..+.+.+..|..||+.+|..... .....+-.|+.-++.++. +.++ +..+++.+..
T Consensus 47 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~KP~-~~~~-l~~~l~~~~~ 124 (135)
T 3eqz_A 47 QDIIILDLMMPDMDGIEVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINTFTKPI-NTEV-LTCFLTSLSN 124 (135)
T ss_dssp TEEEEEECCTTTTHHHHHHHHHHHTTCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEESSC-CHHH-HHHHHHHHSC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhCCCCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeCCCC-CHHH-HHHHHHHHHh
Confidence 455555432 222 34556667799999999988752 222245678888777643 3333 3344444443
No 191
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=38.77 E-value=11 Score=33.86 Aligned_cols=38 Identities=21% Similarity=0.313 Sum_probs=27.1
Q ss_pred HHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 57 QLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 57 ~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
+.++..+.|||.+.-+- --.|+..++..|+|+|++..-
T Consensus 204 ~v~~~~~ipVIa~GGI~------------~g~Dv~kalalGAdaV~iGr~ 241 (336)
T 1ypf_A 204 WCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIGSL 241 (336)
T ss_dssp HHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEESGG
T ss_pred HHHHHcCCcEEEeCCCC------------CHHHHHHHHHcCCCEEEeChh
Confidence 33444589999865332 236889999999999998643
No 192
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=38.66 E-value=79 Score=27.61 Aligned_cols=85 Identities=13% Similarity=0.153 Sum_probs=54.6
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- .|+|+|+ .| +.....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 56 ~~~~~~ll~~~~vD~V~I~-------tp----~~~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~ 115 (337)
T 3ip3_A 56 YNNWWEMLEKEKPDILVIN-------TV----FSLNGKILLEALERKIHAFV---------EKPIATTFEDLEKIRSVYQ 115 (337)
T ss_dssp CSSHHHHHHHHCCSEEEEC-------SS----HHHHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEe-------CC----cchHHHHHHHHHHCCCcEEE---------eCCCCCCHHHHHHHHHHHH
Confidence 4678999986 8999996 22 34567889999999999997 555 567778776666544
Q ss_pred h-ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 Q-QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~-g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
. |.-.++..+.. .--+| .++.+++++.+
T Consensus 116 ~~g~~~~~~v~~~-~R~~p--~~~~~k~~i~~ 144 (337)
T 3ip3_A 116 KVRNEVFFTAMFG-IRYRP--HFLTAKKLVSE 144 (337)
T ss_dssp HHTTTCCEEECCG-GGGSH--HHHHHHHHHHH
T ss_pred HhCCceEEEeccc-ccCCH--HHHHHHHHHhc
Confidence 3 43211222221 12234 56677777654
No 193
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=38.64 E-value=77 Score=28.08 Aligned_cols=58 Identities=24% Similarity=0.343 Sum_probs=43.3
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- .|.|+|+ .| +.....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 57 ~~~~~~ll~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~---------EKPla~~~~e~~~l~~~a~ 116 (359)
T 3m2t_A 57 LDNVPAMLNQVPLDAVVMA-------GP----PQLHFEMGLLAMSKGVNVFV---------EKPPCATLEELETLIDAAR 116 (359)
T ss_dssp ESSHHHHHHHSCCSEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEc-------CC----cHHHHHHHHHHHHCCCeEEE---------ECCCcCCHHHHHHHHHHHH
Confidence 4678999985 6999996 23 44566788899999999997 556 567778777766554
Q ss_pred h
Q 024709 96 Q 96 (264)
Q Consensus 96 ~ 96 (264)
.
T Consensus 117 ~ 117 (359)
T 3m2t_A 117 R 117 (359)
T ss_dssp H
T ss_pred H
Confidence 3
No 194
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=38.26 E-value=1.8e+02 Score=26.98 Aligned_cols=80 Identities=14% Similarity=0.239 Sum_probs=48.5
Q ss_pred ceEEEeccC-HHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCC
Q 024709 7 IAVIAKIES-IDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIP 82 (264)
Q Consensus 7 ~~iiakIE~-~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~p 82 (264)
..+.+-+.+ .+..+.++.+++. +|++.+.-+ .+. +..+.++++..++. ++|+++.+ .-
T Consensus 226 l~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~-----~G~---~~~~~e~i~~i~~~~p~~pvi~g~----------~~ 287 (494)
T 1vrd_A 226 LLVGAAVGTSPETMERVEKLVKAGVDVIVIDTA-----HGH---SRRVIETLEMIKADYPDLPVVAGN----------VA 287 (494)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCS-----CCS---SHHHHHHHHHHHHHCTTSCEEEEE----------EC
T ss_pred hccccccCcCHhHHHHHHHHHHhCCCEEEEEec-----CCc---hHHHHHHHHHHHHHCCCceEEeCC----------cC
Confidence 344445543 4456677777777 899998432 121 12344555666655 79998632 22
Q ss_pred ChHHHHHHHHHHHhccccccccccc
Q 024709 83 TRAEVADVSELVRQQADALMLSGES 107 (264)
Q Consensus 83 trae~~dv~~~v~~g~d~~~ls~et 107 (264)
+.. +...+...|+|++.++++.
T Consensus 288 t~e---~a~~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 288 TPE---GTEALIKAGADAVKVGVGP 309 (494)
T ss_dssp SHH---HHHHHHHTTCSEEEECSSC
T ss_pred CHH---HHHHHHHcCCCEEEEcCCC
Confidence 233 3356778999999998763
No 195
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=38.02 E-value=56 Score=30.53 Aligned_cols=111 Identities=13% Similarity=0.089 Sum_probs=60.7
Q ss_pred cce-EEEeccCHHHHhcHHHHHhh-----cceeeecCC-----Cc---ccCCCC---CCh-HHHHHHHHHHHHHh--CCC
Q 024709 6 NIA-VIAKIESIDSLKNLNEIILA-----SDGAMVARG-----DL---GAQVPL---EQV-PSIQEKIVQLCRQL--NKP 65 (264)
Q Consensus 6 ~~~-iiakIE~~~~~~n~~eI~~~-----~Dgi~i~rg-----dL---~~~~~~---~~v-~~~qk~ii~~~~~~--gkp 65 (264)
+.. |+.||=--..-+++.+|++. +|||.+.-. |+ ..+.+- +.+ +...+.+-+..+.. ..|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 456 89999532222355666555 899987621 11 111111 223 33333333333444 489
Q ss_pred EEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhhc
Q 024709 66 VIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCRE 133 (264)
Q Consensus 66 v~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~~ 133 (264)
+|....+ - -..|+..++..|+|+|++..--.. +=| .+..+|.++-+.++..
T Consensus 348 IIg~GGI---------~---s~eDa~e~l~aGAd~VqIgra~l~-~GP----~~~~~i~~~L~~~l~~ 398 (415)
T 3i65_A 348 IIASGGI---------F---SGLDALEKIEAGASVCQLYSCLVF-NGM----KSAVQIKRELNHLLYQ 398 (415)
T ss_dssp EEECSSC---------C---SHHHHHHHHHHTEEEEEESHHHHH-HGG----GHHHHHHHHHHHHHHH
T ss_pred EEEECCC---------C---CHHHHHHHHHcCCCEEEEcHHHHh-cCH----HHHHHHHHHHHHHHHH
Confidence 9974422 2 235778999999999999733111 102 3566677776666543
No 196
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=37.81 E-value=44 Score=29.96 Aligned_cols=78 Identities=9% Similarity=0.039 Sum_probs=53.1
Q ss_pred CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHHHHHH
Q 024709 45 LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAVLRSV 123 (264)
Q Consensus 45 ~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~m~~i 123 (264)
.++.....+.+++.++++|+.|.+.... .-...+-+...+.+++. +...|+|.+.|. +|.=...|.+.-+.++.+
T Consensus 132 ~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G~~~P~~v~~lv~~l 207 (337)
T 3ble_A 132 PKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFLP-DTLGVLSPEETFQGVDSL 207 (337)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEEE-CTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEEe-cCCCCcCHHHHHHHHHHH
Confidence 3556677788999999999998875321 00011222334445555 456699999997 888888999888888776
Q ss_pred HHH
Q 024709 124 SLR 126 (264)
Q Consensus 124 ~~~ 126 (264)
..+
T Consensus 208 ~~~ 210 (337)
T 3ble_A 208 IQK 210 (337)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 197
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=37.71 E-value=43 Score=25.23 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=30.4
Q ss_pred HHHHHHHH-HHhcCCcEEEEEcCC--------chHHHHHhhcCCCCcEEEE
Q 024709 157 ICNGAAKI-ANKLKASALFVYTKT--------GQMASLLSRSRPDCPIFAF 198 (264)
Q Consensus 157 IA~aAv~l-A~~l~A~aIVv~T~s--------G~tA~~iSr~RP~~PIiAv 198 (264)
.+....+. |++.+++.||+-++. |+++..+.+.-| ||++.+
T Consensus 106 ~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~-~PVlvV 155 (156)
T 3fg9_A 106 VDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAP-ISVIVV 155 (156)
T ss_dssp HHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCC-CCEEEe
Confidence 44555666 788999988888762 677888877654 998875
No 198
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=37.54 E-value=28 Score=31.39 Aligned_cols=50 Identities=16% Similarity=0.156 Sum_probs=36.3
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
++.+++. .+||.+. .+|.-.++......++++.+.|+||+.+||..+-.+
T Consensus 235 l~~~~~~g~~GiVle------~~G~Gn~p~~~~~~l~~a~~~Gi~VV~~Sr~~~G~v 285 (332)
T 2wlt_A 235 FQASLNSHAKGVVIA------GVGNGNVSAGFLKAMQEASQMGVVIVRSSRVGSGGV 285 (332)
T ss_dssp HHHHHHTTCSEEEEE------EBTTTBCCHHHHHHHHHHHHTTCEEEEEESSSSSCC
T ss_pred HHHHHhCCCCEEEEe------eECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCc
Confidence 5566655 8999996 444444445666677888899999999999875544
No 199
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=37.52 E-value=28 Score=31.35 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=36.3
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
++.+++. .+||.+. .+|.-.+|......++++.+.|+||+.+||..+-.+
T Consensus 232 l~~~~~~g~~GiVle------~~G~Gn~p~~~~~~l~~a~~~gi~VV~~Sr~~~G~v 282 (330)
T 1wsa_A 232 VNAALQAGAKGIIHA------GMGNGNPFPLTQNALEKAAKSGVVVARSSRVGSGST 282 (330)
T ss_dssp HHHHHHTTCSEEEEE------EBTTTBCCHHHHHHHHHHHHTTCEEEEEESSSSSCB
T ss_pred HHHHHhCCCCEEEEe------eECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCc
Confidence 5566655 8999996 444444445666677888899999999999775544
No 200
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=37.50 E-value=1.1e+02 Score=26.58 Aligned_cols=124 Identities=17% Similarity=0.149 Sum_probs=69.2
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.|+.+- .|.......+...-..|++.+...++ +.| -++++...++..+-
T Consensus 78 ~a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~---~~~-~~~~~~a~~~~~~~----- 137 (303)
T 1o58_A 78 IAIAMIGAKRGHRVILT-----------MPETMSVERRKVLKMLGAELVLTPGE---LGM-KGAVEKALEISRET----- 137 (303)
T ss_dssp HHHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGG---GHH-HHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC---CCH-HHHHHHHHHHHHhc-----
Confidence 35677888999998873 22222223344566689987775432 112 34544433332211
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHhh----cCCC-CcEEEEcCChh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLK--ASALFVYTKTGQMASLLSR----SRPD-CPIFAFAPMSS 203 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~--A~aIVv~T~sG~tA~~iSr----~RP~-~PIiAvT~~~~ 203 (264)
. .++..+. .. +..+..--...+.++.++++ .+.||+.+-+|.++.-+++ .+|. ..|+++.+...
T Consensus 138 --~---~~~~~~~-~n-~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~ 208 (303)
T 1o58_A 138 --G---AHMLNQF-EN-PYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKS 208 (303)
T ss_dssp --C---CBCCCTT-TC-HHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTS
T ss_pred --C---eEeCCCC-CC-HHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 1 1111111 10 11111011233567777775 6899999999998776654 4588 89999988654
No 201
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=37.47 E-value=1.2e+02 Score=22.21 Aligned_cols=76 Identities=11% Similarity=0.150 Sum_probs=45.3
Q ss_pred HHHHHHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHH
Q 024709 161 AAKIANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFS 234 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~ 234 (264)
+.....+.+.+.|++-.. +|. ..+.+.+..|.+||+++|....... .-.+..|+.-++.++. +.++. ..+++
T Consensus 58 al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~-~~~~l-~~~i~ 135 (150)
T 4e7p_A 58 AIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKER-SIADL-MQTLH 135 (150)
T ss_dssp HHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTS-CHHHH-HHHHH
T ss_pred HHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCC-CHHHH-HHHHH
Confidence 334455667786666533 333 3556666679999999998765322 2245678888777643 44443 34454
Q ss_pred HHHH
Q 024709 235 LLKA 238 (264)
Q Consensus 235 ~~~~ 238 (264)
.+.+
T Consensus 136 ~~~~ 139 (150)
T 4e7p_A 136 TVLE 139 (150)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 4444
No 202
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=37.46 E-value=23 Score=27.94 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=25.2
Q ss_pred CcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCChh
Q 024709 170 ASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMSS 203 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~~ 203 (264)
-+.+|++|.||.|...+ +|- -.+|++++|.+..
T Consensus 83 ~d~vi~iS~sG~t~~~~~~~~~ak~-~g~~vi~IT~~~~ 120 (180)
T 1jeo_A 83 DDLLILISGSGRTESVLTVAKKAKN-INNNIIAIVCECG 120 (180)
T ss_dssp TCEEEEEESSSCCHHHHHHHHHHHT-TCSCEEEEESSCC
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHH-CCCcEEEEeCCCC
Confidence 46899999999986544 333 4699999999754
No 203
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=37.41 E-value=13 Score=34.26 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=26.3
Q ss_pred CcEEEEEcCCchHHHHH-----hhcC-CCCcEEEEcCChh
Q 024709 170 ASALFVYTKTGQMASLL-----SRSR-PDCPIFAFAPMSS 203 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~i-----Sr~R-P~~PIiAvT~~~~ 203 (264)
-+.+|++|.||.|...+ +|-+ +.++++++|++..
T Consensus 109 ~dlvI~iS~SGeT~e~l~al~~ak~~~~Ga~~iaIT~~~~ 148 (393)
T 3odp_A 109 PTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSE 148 (393)
T ss_dssp CEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTT
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCC
Confidence 46899999999987755 4544 5899999998643
No 204
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=37.33 E-value=28 Score=31.28 Aligned_cols=50 Identities=10% Similarity=0.037 Sum_probs=36.0
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
++.+++. .+||.+. -+|.-.++......++++.+.|+||+.+||..+-.+
T Consensus 234 l~~~~~~g~~GiVle------~~G~Gn~p~~~~~~l~~a~~~Gi~VV~~Sr~~~G~v 284 (327)
T 1o7j_A 234 YDAAIQHGVKGIVYA------GMGAGSVSVRGIAGMRKALEKGVVVMRSTRTGNGIV 284 (327)
T ss_dssp HHHHHHTTCSEEEEE------EBTTTBCCHHHHHHHHHHHHTTCEEEEEESSSBSCB
T ss_pred HHHHHhCCCCEEEEe------eECCCCCCHHHHHHHHHHHHCCceEEEECCCCCCCc
Confidence 5556655 8999996 444444445666677888899999999999775544
No 205
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=37.31 E-value=37 Score=31.88 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 50 SIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 50 ~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
.....+-+.+.+.+.|||.+..+- --.|++.|+..|||+|++..-
T Consensus 315 ~~l~~~~~~~~~~~vpVia~GGi~------------~~~di~kalalGA~~v~~g~~ 359 (486)
T 2cu0_A 315 TAVAMVADRAQEYGLYVIADGGIR------------YSGDIVKAIAAGADAVMLGNL 359 (486)
T ss_dssp HHHHHHHHHHHHHTCEEEEESCCC------------SHHHHHHHHHTTCSEEEESTT
T ss_pred HHHHHHHHHHHHcCCcEEecCCCC------------CHHHHHHHHHcCCCceeeChh
Confidence 344455556666789999865332 235889999999999998743
No 206
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=37.29 E-value=71 Score=33.45 Aligned_cols=87 Identities=23% Similarity=0.334 Sum_probs=59.4
Q ss_pred cceEEEeccCHHHHhcHHHHHhh--------------------cceeeecCCCcccCCCC--------------------
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA--------------------SDGAMVARGDLGAQVPL-------------------- 45 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~--------------------~Dgi~i~rgdL~~~~~~-------------------- 45 (264)
|+.++|| +.+|..||-.++.. .+|++++.|-+..+++.
T Consensus 206 hlvlLAk--N~~Gy~nL~kLvS~a~~~~~~~~pri~~~~L~~~~egLi~~s~c~~Gev~~~l~~~~~~~a~~~~~~y~yl 283 (1041)
T 3f2b_A 206 HVTLLAQ--NETGLKNLFKLVSLSHIQYFHRVPRIPRSVLVKHRDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFL 283 (1041)
T ss_dssp EEEEEEC--SHHHHHHHHHHHHHHHTTTCSSSCCEEHHHHHHTCTTEEEECCSSSSSSTTC--------CCTTGGGCSBE
T ss_pred eEEEEeC--CHHHHHHHHHHHHHHHHhcccCCCCcCHHHHHhccCCeEEEcCccccHHHHHHhcCCHHHHHHHHHHhhHH
Confidence 4556665 89999999777763 47888887766544321
Q ss_pred --------------------CChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccc
Q 024709 46 --------------------EQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQAD 99 (264)
Q Consensus 46 --------------------~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d 99 (264)
++...+.+.+++.+++.|+|++.... ++...|.+++..|+-.+...|.|
T Consensus 284 ei~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~la~~~~~p~VAT~d-----vhy~~~ed~~~~dvL~~~~~~~~ 352 (1041)
T 3f2b_A 284 EVHPPDVYKPLIEMDYVKDEEMIKNIIRSIVALGEKLDIPVVATGN-----VHYLNPEDKIYRKILIHSQGGAN 352 (1041)
T ss_dssp EECCGGGGCCC----CCSCHHHHHHHHHHHHHHHHHTTCCEEECCC-----BSBSSGGGHHHHHHHHHTTGGGS
T ss_pred HhcCccccHHHHhccCCCcHHHHHHHHHHHHHHHHHcCCCEEEeCC-----ceecCHhhHHHHHHHHhhcccCC
Confidence 01123457889999999999985332 23458889998888877554443
No 207
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=37.26 E-value=60 Score=23.80 Aligned_cols=44 Identities=2% Similarity=-0.056 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC------chHHHHHhhcCCCCcEEEEcCC
Q 024709 157 ICNGAAKIANKLKASALFVYTKT------GQMASLLSRSRPDCPIFAFAPM 201 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~s------G~tA~~iSr~RP~~PIiAvT~~ 201 (264)
.+....+.|.+.+++.||+-++. |+++..+.+.-| ||++.+-+.
T Consensus 90 ~~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~~-~pVlvv~~~ 139 (141)
T 1jmv_A 90 LGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIK-IDMLVVPLR 139 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTCC-SEEEEEECC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcCC-CCEEEeeCC
Confidence 44556678899999999988762 345666665544 999988654
No 208
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=37.01 E-value=53 Score=28.21 Aligned_cols=79 Identities=19% Similarity=0.231 Sum_probs=47.7
Q ss_pred HHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHH----------------HHHHHHHHh--CCCEEEEhhhhhhhh
Q 024709 17 DSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQE----------------KIVQLCRQL--NKPVIVASQLLESMI 77 (264)
Q Consensus 17 ~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk----------------~ii~~~~~~--gkpv~~atq~leSM~ 77 (264)
..++.++.+.+. +|+|.++ .-..=|..+=+.+|+ .+++..++. .+|+++-+.
T Consensus 32 ~~~~~~~~l~~~GaD~ieig---~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y------ 102 (268)
T 1qop_A 32 QSLKIIDTLIDAGADALELG---VPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMY------ 102 (268)
T ss_dssp HHHHHHHHHHHTTCSSEEEE---CCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEEC------
T ss_pred HHHHHHHHHHHCCCCEEEEC---CCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEc------
Confidence 345556666666 9999995 111223345566664 678888876 789887210
Q ss_pred hCC---CCChHHHHHHHHHHHhccccccccccc
Q 024709 78 EYP---IPTRAEVADVSELVRQQADALMLSGES 107 (264)
Q Consensus 78 ~~~---~ptrae~~dv~~~v~~g~d~~~ls~et 107 (264)
.|| .++. ..+..+...|+|++.+..++
T Consensus 103 ~n~v~~~g~~---~~~~~~~~aGadgii~~d~~ 132 (268)
T 1qop_A 103 ANLVFNNGID---AFYARCEQVGVDSVLVADVP 132 (268)
T ss_dssp HHHHHTTCHH---HHHHHHHHHTCCEEEETTCC
T ss_pred ccHHHHhhHH---HHHHHHHHcCCCEEEEcCCC
Confidence 122 1222 33455666799999987665
No 209
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=36.95 E-value=93 Score=26.20 Aligned_cols=62 Identities=11% Similarity=0.048 Sum_probs=37.9
Q ss_pred hcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcc
Q 024709 20 KNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQA 98 (264)
Q Consensus 20 ~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~ 98 (264)
+.+++.++. +|.|.+.-..+ .. |...+++++.|+++|.++++- ..|..| ...+...|+
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~---~~----p~~l~~~i~~~~~~g~~v~~~-----------v~t~ee---a~~a~~~Ga 150 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTAR---QR----PVAVEALLARIHHHHLLTMAD-----------CSSVDD---GLACQRLGA 150 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSS---CC----SSCHHHHHHHHHHTTCEEEEE-----------CCSHHH---HHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECcccc---CC----HHHHHHHHHHHHHCCCEEEEe-----------CCCHHH---HHHHHhCCC
Confidence 345555555 67766643221 01 134567888888889988873 223333 356788999
Q ss_pred cccc
Q 024709 99 DALM 102 (264)
Q Consensus 99 d~~~ 102 (264)
|.+-
T Consensus 151 d~Ig 154 (232)
T 3igs_A 151 DIIG 154 (232)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 9994
No 210
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=36.88 E-value=2.1e+02 Score=24.94 Aligned_cols=87 Identities=11% Similarity=0.078 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHHHhcCC----cEEEEEcCCchHHHHHhhc--CCCCcEEEEcCChh--hhhhcccccccEEEEecCCCC
Q 024709 153 IPGEICNGAAKIANKLKA----SALFVYTKTGQMASLLSRS--RPDCPIFAFAPMSS--VRRRLNLQWGLVPFCLNFSDD 224 (264)
Q Consensus 153 ~~~aIA~aAv~lA~~l~A----~aIVv~T~sG~tA~~iSr~--RP~~PIiAvT~~~~--~aR~L~L~~GV~P~~~~~~~~ 224 (264)
..+.-+...+..|.+.+. +.||.. .+|++++.+|.+ +-..|.+.+.|... .-+++.-.+|-.-+.++...+
T Consensus 52 fK~R~a~~~l~~a~~~g~l~~~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 130 (325)
T 3dwg_A 52 IKDRPAVRMIEQAEADGLLRPGATILEP-TSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGG 130 (325)
T ss_dssp TTHHHHHHHHHHHHHTTCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTT
T ss_pred hHHHHHHHHHHHHHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCC
Confidence 445455555555555554 555554 467776655421 12455555544321 111222235655555543333
Q ss_pred HHHHHHHHHHHHHHcC
Q 024709 225 MESNLNQTFSLLKARG 240 (264)
Q Consensus 225 ~e~~i~~al~~~~~~g 240 (264)
.++....+.+.+.+.+
T Consensus 131 ~~~~~~~a~~l~~~~~ 146 (325)
T 3dwg_A 131 SNTAVATAKELAATNP 146 (325)
T ss_dssp HHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhCC
Confidence 4444444545555443
No 211
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=36.83 E-value=58 Score=28.41 Aligned_cols=80 Identities=16% Similarity=0.157 Sum_probs=44.5
Q ss_pred HHHHhcH-HHHHhh-cceeeecCCCcccCC---CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHH-H
Q 024709 16 IDSLKNL-NEIILA-SDGAMVARGDLGAQV---PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVA-D 89 (264)
Q Consensus 16 ~~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~---~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~-d 89 (264)
.++++++ +-.++. +||+++. |- +.|. ..++-..+.+..++.++. ..||++-+ ...+-.|.- -
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~-Gt-tGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvi~Gv---------g~~~t~~ai~l 88 (291)
T 3a5f_A 21 FDKLSELIEWHIKSKTDAIIVC-GT-TGEATTMTETERKETIKFVIDKVNK-RIPVIAGT---------GSNNTAASIAM 88 (291)
T ss_dssp HHHHHHHHHHHHHTTCCEEEES-SG-GGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-cc-ccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CcccHHHHHHH
Confidence 3455443 445555 8999884 21 2233 334434444444444432 47998755 344444543 4
Q ss_pred HHHHHHhccccccccccc
Q 024709 90 VSELVRQQADALMLSGES 107 (264)
Q Consensus 90 v~~~v~~g~d~~~ls~et 107 (264)
...|-..|+|++|+..=-
T Consensus 89 a~~a~~~Gadavlv~~P~ 106 (291)
T 3a5f_A 89 SKWAESIGVDGLLVITPY 106 (291)
T ss_dssp HHHHHHTTCSEEEEECCC
T ss_pred HHHHHhcCCCEEEEcCCC
Confidence 445667899999997543
No 212
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=36.73 E-value=20 Score=28.48 Aligned_cols=32 Identities=16% Similarity=0.218 Sum_probs=24.5
Q ss_pred CcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCCh
Q 024709 170 ASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMS 202 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~ 202 (264)
-+.+|+++.||.|...+ +|- -.+|++++|.+.
T Consensus 80 ~d~vI~iS~sG~t~~~~~~~~~ak~-~g~~vi~IT~~~ 116 (186)
T 1m3s_A 80 GDLVIIGSGSGETKSLIHTAAKAKS-LHGIVAALTINP 116 (186)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHH-TTCEEEEEESCT
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 46899999999986544 333 359999999975
No 213
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=36.29 E-value=71 Score=28.40 Aligned_cols=70 Identities=16% Similarity=0.293 Sum_probs=48.3
Q ss_pred HHhh-cceeeecCC-----CcccCCC--CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhC-CCCChHHHHHHHHHHH
Q 024709 25 IILA-SDGAMVARG-----DLGAQVP--LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEY-PIPTRAEVADVSELVR 95 (264)
Q Consensus 25 I~~~-~Dgi~i~rg-----dL~~~~~--~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~-~~ptrae~~dv~~~v~ 95 (264)
+.++ .|.|.+-+| ..|...+ .++-++...++.+++++.++-+++ |+.- |.- +-.|+..++.
T Consensus 179 mA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdviv-------Lc~gGpIs---tpeDv~~~l~ 248 (286)
T 2p10_A 179 MAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIII-------LSHGGPIA---NPEDARFILD 248 (286)
T ss_dssp HHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEE-------EEESTTCC---SHHHHHHHHH
T ss_pred HHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEE-------EecCCCCC---CHHHHHHHHh
Confidence 4444 899999887 4555544 355578999999999999998887 3344 333 3457788888
Q ss_pred h--cccccccc
Q 024709 96 Q--QADALMLS 104 (264)
Q Consensus 96 ~--g~d~~~ls 104 (264)
. |+|++...
T Consensus 249 ~t~G~~G~~gA 259 (286)
T 2p10_A 249 SCQGCHGFYGA 259 (286)
T ss_dssp HCTTCCEEEES
T ss_pred cCCCccEEEee
Confidence 8 99999886
No 214
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=36.13 E-value=30 Score=31.06 Aligned_cols=50 Identities=14% Similarity=0.094 Sum_probs=36.2
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
++.+++. .+||.+. -+|.-.+|......++++.+.|+||+.+||..+-.+
T Consensus 228 l~~~~~~g~~GiVl~------~~G~Gn~p~~~~~~l~~a~~~gi~VV~~Sr~~~G~v 278 (326)
T 1nns_A 228 AKALVDAGYDGIVSA------GVGNGNLYKSVFDTLATAAKTGTAVVRSSRVPTGAT 278 (326)
T ss_dssp HHHHHHTTCSEEEEE------EBTTTBCCHHHHHHHHHHHHTTCEEEEEESSSSSCB
T ss_pred HHHHHhCCCCEEEEe------eECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCc
Confidence 5566655 8999996 444444445666677888899999999999875544
No 215
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=36.12 E-value=14 Score=37.99 Aligned_cols=63 Identities=17% Similarity=0.317 Sum_probs=55.4
Q ss_pred cceEEEeccCHHHHhcHHHHHhh---cc----------eeeecCCCcccCCCC----CChHHHHHHHHHHHHHhCCCEEE
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA---SD----------GAMVARGDLGAQVPL----EQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~---~D----------gi~i~rgdL~~~~~~----~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
.+.|+.=.||.+.++|.++|++. .+ -||+|..|=+-+-|. =.+..+|.++.+.|+++|.++..
T Consensus 498 ~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~l 577 (883)
T 1jqn_A 498 AMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTL 577 (883)
T ss_dssp CCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeeccccccccHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 57899999999999999999987 22 499999998888886 57889999999999999999986
No 216
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=35.82 E-value=75 Score=28.11 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=46.6
Q ss_pred eEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHH
Q 024709 8 AVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEV 87 (264)
Q Consensus 8 ~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~ 87 (264)
.+++-+-.++.+ +.+.+++|.+-||-+++ ...+ +++++-+.||||++.|-|- -|..|+
T Consensus 93 p~~Tev~d~~~v---~~l~~~vd~lqIgA~~~------~n~~-----LLr~va~~gkPVilK~G~~--------~t~~ei 150 (285)
T 3sz8_A 93 PVITDVHEAEQA---APVAEIADVLQVPAFLA------RQTD-----LVVAIAKAGKPVNVKKPQF--------MSPTQL 150 (285)
T ss_dssp CEEEECCSGGGH---HHHHTTCSEEEECGGGT------TCHH-----HHHHHHHTSSCEEEECCTT--------SCGGGT
T ss_pred eEEEEeCCHHHH---HHHHHhCCEEEECcccc------CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHH
Confidence 344444444333 44445588888886655 3333 6666668999999966432 355666
Q ss_pred HHHHHHHH-hccccccccc
Q 024709 88 ADVSELVR-QQADALMLSG 105 (264)
Q Consensus 88 ~dv~~~v~-~g~d~~~ls~ 105 (264)
...+..+. .|.+=++|..
T Consensus 151 ~~ave~i~~~Gn~~i~L~e 169 (285)
T 3sz8_A 151 KHVVSKCGEVGNDRVMLCE 169 (285)
T ss_dssp HHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEe
Confidence 66666554 4887777753
No 217
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=35.59 E-value=55 Score=28.65 Aligned_cols=84 Identities=14% Similarity=0.173 Sum_probs=53.3
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++|+++- .|+|+|+ .|. ..-..++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 75 y~d~~ell~~~~iDaV~I~-------tP~----~~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~ 134 (350)
T 4had_A 75 FGSYEEMLASDVIDAVYIP-------LPT----SQHIEWSIKAADAGKHVVC---------EKPLALKAGDIDAVIAARD 134 (350)
T ss_dssp ESSHHHHHHCSSCSEEEEC-------SCG----GGHHHHHHHHHHTTCEEEE---------CSCCCSSGGGGHHHHHHHH
T ss_pred eCCHHHHhcCCCCCEEEEe-------CCC----chhHHHHHHHHhcCCEEEE---------eCCcccchhhHHHHHHHHH
Confidence 4678999976 8999995 332 2345678889999999998 666 567778777766544
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.. ..++.-+-.-. -+| .++.+++++.+
T Consensus 135 ~~-~~~l~v~~~~R-~~p--~~~~~k~~i~~ 161 (350)
T 4had_A 135 RN-KVVVTEAYMIT-YSP--VWQKVRSLIDE 161 (350)
T ss_dssp HH-TCCEEECCGGG-GSH--HHHHHHHHHHT
T ss_pred Hc-CCceeEeeeee-cCH--HHHHhhHhhhc
Confidence 32 22222222111 134 66777777654
No 218
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=35.56 E-value=78 Score=27.72 Aligned_cols=44 Identities=18% Similarity=0.117 Sum_probs=34.8
Q ss_pred HHHHHHHHhcC--CcEEEEEcCCchHHHHHh----hcCCCCcEEEEcCCh
Q 024709 159 NGAAKIANKLK--ASALFVYTKTGQMASLLS----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 159 ~aAv~lA~~l~--A~aIVv~T~sG~tA~~iS----r~RP~~PIiAvT~~~ 202 (264)
..+.++.++++ .+.||+..-+|.|+.-++ ..+|...|+++-+..
T Consensus 169 t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~ 218 (325)
T 1j0a_A 169 RAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGR 218 (325)
T ss_dssp HHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSS
T ss_pred HHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecC
Confidence 44667787774 699999999999876655 457999999998854
No 219
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=35.56 E-value=79 Score=26.59 Aligned_cols=56 Identities=18% Similarity=0.172 Sum_probs=40.6
Q ss_pred ChHHH-HHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHHHHH
Q 024709 47 QVPSI-QEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAVLRS 122 (264)
Q Consensus 47 ~v~~~-qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~m~~ 122 (264)
....+ -+..++.++++|++|.+-| ++ .| .+... +...|+|+++- +||..+.+.+++
T Consensus 177 ~~~~~~~~~~v~~~~~~G~~v~~wT------vn--~~-----~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~ 234 (248)
T 1zcc_A 177 TPAQMRRPGIIEASRKAGLEIMVYY------GG--DD-----MAVHREIATSDVDYINL-------DRPDLFAAVRSG 234 (248)
T ss_dssp CHHHHHSHHHHHHHHHHTCEEEEEC------CC--CC-----HHHHHHHHHSSCSEEEE-------SCHHHHHHHHHH
T ss_pred cHHHhCCHHHHHHHHHCCCEEEEEC------CC--CH-----HHHHHHHHHcCCCEEEE-------CCHHHHHHHHHH
Confidence 34455 5789999999999999977 11 22 34466 77889999875 389877776654
No 220
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=35.32 E-value=54 Score=27.82 Aligned_cols=47 Identities=21% Similarity=0.283 Sum_probs=32.3
Q ss_pred HHHHHhhcceeeecCCC-----cccCCCC-------CChHHHHHHHHHHHHHhCCCEEE
Q 024709 22 LNEIILASDGAMVARGD-----LGAQVPL-------EQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 22 ~~eI~~~~Dgi~i~rgd-----L~~~~~~-------~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
+++.++..||+++.=|. +=-+-+. +.-......+++.+.+.|||+.-
T Consensus 55 ~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLG 113 (254)
T 3fij_A 55 AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFA 113 (254)
T ss_dssp HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEE
Confidence 67788889999998873 1111111 22234567899999999999875
No 221
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=35.23 E-value=80 Score=27.66 Aligned_cols=118 Identities=12% Similarity=0.046 Sum_probs=71.7
Q ss_pred CCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHHHHH
Q 024709 44 PLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAVLRS 122 (264)
Q Consensus 44 ~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~m~~ 122 (264)
..++.....+++++.++++|..|.+... ..++-+...+-+++. +...|+|.+.|. +|.=.-.|.+.-+.+..
T Consensus 115 s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~G~~~P~~v~~lv~~ 187 (293)
T 3ewb_X 115 SRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVINIP-DTVGYTNPTEFGQLFQD 187 (293)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEEEE-CSSSCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEEec-CCCCCCCHHHHHHHHHH
Confidence 3466677788999999999999987442 112233344555555 556899999997 88888999888887777
Q ss_pred HHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCch
Q 024709 123 VSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLKASALFVYTKTGQ 181 (264)
Q Consensus 123 i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~aIVv~T~sG~ 181 (264)
+..+.-.. . .... .++.+. + .-+|.+-...|-+.+++ .|=-|-.|-
T Consensus 188 l~~~~~~~-~-~~~l-~~H~Hn-------d--~Gla~AN~laA~~aGa~-~vd~sv~Gl 233 (293)
T 3ewb_X 188 LRREIKQF-D-DIIF-ASHCHD-------D--LGMATANALAAIENGAR-RVEGTINGI 233 (293)
T ss_dssp HHHHCTTG-G-GSEE-EEECBC-------T--TSCHHHHHHHHHHTTCC-EEEEBGGGC
T ss_pred HHHhcCCc-c-CceE-EEEeCC-------C--cChHHHHHHHHHHhCCC-EEEeecccc
Confidence 65432110 0 0000 011111 1 12445555677778887 555555553
No 222
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=35.20 E-value=30 Score=26.69 Aligned_cols=55 Identities=11% Similarity=0.178 Sum_probs=42.5
Q ss_pred HHHHhcHHHHHhh--cceeeec--CCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEh
Q 024709 16 IDSLKNLNEIILA--SDGAMVA--RGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVAS 70 (264)
Q Consensus 16 ~~~~~n~~eI~~~--~Dgi~i~--rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~at 70 (264)
.+.+++++..+.. .|.|+|. -.|+.-..+.+++....+++++.+++.|.++++.+
T Consensus 52 ~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~ 110 (185)
T 3hp4_A 52 GGALRRLDALLEQYEPTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALME 110 (185)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 4567788877663 7877765 44776677778888889999999999998888754
No 223
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=35.16 E-value=36 Score=32.86 Aligned_cols=43 Identities=9% Similarity=0.394 Sum_probs=35.9
Q ss_pred HhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 19 LKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
.+.++|+++. +|++.|+.|=|.- ....+.+++.++++++|+++
T Consensus 296 ~~E~~e~~~~~~~alvin~G~l~~-------~~~~~~a~~~a~~~~~PvVl 339 (540)
T 3nl6_A 296 QSEVNDLAAIPHATLLLNTGSVAP-------PEMLKAAIRAYNDVKRPIVF 339 (540)
T ss_dssp HHHHHHHTTSTTCEEEEESSCSCC-------HHHHHHHHHHHHTTTCCEEE
T ss_pred HHHHHHHHhccCCeEEEeCCCCCH-------HHHHHHHHHHHHHcCCCEEE
Confidence 4567888888 9999999997632 77778888999999999987
No 224
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=35.15 E-value=1.1e+02 Score=24.87 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=35.0
Q ss_pred hC-CCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 62 LN-KPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 62 ~g-kpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.+ +|++.+..+ .|. ++..+...|+|++.+++---..+.|.+.++.+.+.+++
T Consensus 170 ~~~~pvia~GGI--------~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 222 (227)
T 2tps_A 170 GISIPIVGIGGI--------TID-----NAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQT 222 (227)
T ss_dssp TCCCCEEEESSC--------CTT-----TSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCC--------CHH-----HHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHHHHHh
Confidence 45 899886531 233 33566678999999987665567787887777665543
No 225
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=34.89 E-value=47 Score=29.12 Aligned_cols=49 Identities=14% Similarity=0.325 Sum_probs=37.3
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHH
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLR 121 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~ 121 (264)
+..++.|+++|++|.+=| .-+ ..+.......|+|+++- +||-.+.+.+.
T Consensus 258 ~~~v~~~~~~Gl~V~~WT----------Vn~---~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~ 306 (313)
T 3l12_A 258 PELVAEAHDLGLIVLTWT----------VNE---PEDIRRMATTGVDGIVT-------DYPGRTQRILI 306 (313)
T ss_dssp HHHHHHHHHTTCEEEEBC----------CCS---HHHHHHHHHHTCSEEEE-------SCHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEc----------CCC---HHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 688999999999999866 111 23556778899999985 58987777664
No 226
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=34.71 E-value=86 Score=23.88 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHhhcCCCCcEEEE
Q 024709 157 ICNGAAKIANKLKASALFVYTK---------TGQMASLLSRSRPDCPIFAF 198 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~---------sG~tA~~iSr~RP~~PIiAv 198 (264)
.+....+.|++.+++.||+-++ -|+++..+.+.- +||++.+
T Consensus 105 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a-~~PVLvV 154 (155)
T 3dlo_A 105 PPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKA-NKPVICI 154 (155)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhC-CCCEEEe
Confidence 4456677888999998888764 367888888754 4999876
No 227
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=34.69 E-value=1.1e+02 Score=21.00 Aligned_cols=59 Identities=14% Similarity=0.141 Sum_probs=37.7
Q ss_pred HHHHhcCCcEEEEEc----CCch-HHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCC
Q 024709 163 KIANKLKASALFVYT----KTGQ-MASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFS 222 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T----~sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~ 222 (264)
....+.+.+.+++-. .+|. ..+.+.+..|..||+.+|...... .-.+..|+.-++.++.
T Consensus 39 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~-~~~~~~g~~~~l~Kp~ 102 (116)
T 3a10_A 39 KKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYR-SDMSSWAADEYVVKSF 102 (116)
T ss_dssp HHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCGGGG-GCGGGGGSSEEEECCS
T ss_pred HHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCcchH-HHHHhccccceEECCC
Confidence 344455677666543 2443 345666667899999999876654 3345678877776544
No 228
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=34.68 E-value=96 Score=27.11 Aligned_cols=77 Identities=14% Similarity=0.161 Sum_probs=50.4
Q ss_pred ceEEEeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChH
Q 024709 7 IAVIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRA 85 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptra 85 (264)
+.+++.+.+++-++. .... .|.+++..-|- | .+...+.. .++.+...|+|++|=+ +.++.
T Consensus 41 ~gl~~~~~~p~~~e~---a~~~GaD~v~lDlEh~----~-~~~~~~~~-~l~a~~~~~~~~~VRv---------~~~d~- 101 (287)
T 2v5j_A 41 IGLWLGLSSSYSAEL---LAGAGFDWLLIDGEHA----P-NNVQTVLT-QLQAIAPYPSQPVVRP---------SWNDP- 101 (287)
T ss_dssp EEEEECSCCHHHHHH---HHTSCCSEEEEESSSS----S-CCHHHHHH-HHHHHTTSSSEEEEEC---------SSSCH-
T ss_pred EEEEEECCCHHHHHH---HHhCCCCEEEEeCCCc----c-chHHHHHH-HHHHHHhcCCCEEEEE---------CCCCH-
Confidence 556777877766543 2333 89999998875 2 22233332 3455666789998832 23332
Q ss_pred HHHHHHHHHHhcccccccc
Q 024709 86 EVADVSELVRQQADALMLS 104 (264)
Q Consensus 86 e~~dv~~~v~~g~d~~~ls 104 (264)
.|+..++..|+|+||+.
T Consensus 102 --~di~~~ld~ga~~ImlP 118 (287)
T 2v5j_A 102 --VQIKQLLDVGTQTLLVP 118 (287)
T ss_dssp --HHHHHHHHTTCCEEEES
T ss_pred --HHHHHHHhCCCCEEEeC
Confidence 38888889999999996
No 229
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=34.39 E-value=1e+02 Score=27.26 Aligned_cols=101 Identities=14% Similarity=0.065 Sum_probs=56.0
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCCCC---CChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHH
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQVPL---EQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVS 91 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~~---~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~ 91 (264)
++++++ +-.++. +||+++. | -+.|.+. ++-..+.+.+++.++ -..||++-+- .-|+.-+.-..
T Consensus 33 ~~l~~lv~~li~~Gv~Gl~v~-G-tTGE~~~Ls~eEr~~v~~~~v~~~~-grvpViaGvg---------~~t~~ai~la~ 100 (316)
T 3e96_A 33 HHYKETVDRIVDNGIDVIVPC-G-NTSEFYALSLEEAKEEVRRTVEYVH-GRALVVAGIG---------YATSTAIELGN 100 (316)
T ss_dssp HHHHHHHHHHHTTTCCEECTT-S-GGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEEC---------SSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeC-c-cccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEEeC---------cCHHHHHHHHH
Confidence 455443 445555 8999884 2 2223332 333333333344332 2468887651 22333334445
Q ss_pred HHHHhccccccccccccCCCChHHHHHHHHHHHHHHHh
Q 024709 92 ELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEK 129 (264)
Q Consensus 92 ~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~ 129 (264)
.|-..|+|++|+..=--...-+-+.++..+.|+..+..
T Consensus 101 ~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~l 138 (316)
T 3e96_A 101 AAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDF 138 (316)
T ss_dssp HHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTS
T ss_pred HHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 56678999999864333333456777888888877753
No 230
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=34.38 E-value=69 Score=29.17 Aligned_cols=85 Identities=15% Similarity=0.264 Sum_probs=55.5
Q ss_pred HHhcHHHHHhh-------cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHH
Q 024709 18 SLKNLNEIILA-------SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVAD 89 (264)
Q Consensus 18 ~~~n~~eI~~~-------~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~d 89 (264)
...+++++++. .|+|+|+ .|.. ....++.+|-++||+|++ +.| ..+.+|...
T Consensus 93 ~~~~~~~ll~~~~~~~~~vD~V~I~-------tp~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~ 152 (417)
T 3v5n_A 93 VYSDFKEMAIREAKLKNGIEAVAIV-------TPNH----VHYAAAKEFLKRGIHVIC---------DKPLTSTLADAKK 152 (417)
T ss_dssp BCSCHHHHHHHHHHCTTCCSEEEEC-------SCTT----SHHHHHHHHHTTTCEEEE---------ESSSCSSHHHHHH
T ss_pred ccCCHHHHHhcccccCCCCcEEEEC-------CCcH----HHHHHHHHHHhCCCeEEE---------ECCCcCCHHHHHH
Confidence 34678999986 8999996 3322 235678889999999997 666 667888877
Q ss_pred HHHHHHhccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 90 VSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 90 v~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
+..+.... ...+.-+..... +| .++.+++++.+
T Consensus 153 l~~~a~~~-g~~~~v~~~~R~-~p--~~~~~k~~i~~ 185 (417)
T 3v5n_A 153 LKKAADES-DALFVLTHNYTG-YP--MVRQAREMIEN 185 (417)
T ss_dssp HHHHHHHC-SSCEEEECGGGG-SH--HHHHHHHHHHT
T ss_pred HHHHHHHc-CCEEEEEecccC-CH--HHHHHHHHHhc
Confidence 77765442 233333332222 34 67777777654
No 231
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=34.30 E-value=78 Score=27.60 Aligned_cols=84 Identities=14% Similarity=0.198 Sum_probs=52.9
Q ss_pred HhcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++ -+|.|+|+ .|.. ....++..|-++||+|++ +.| ..+.+|...+..+..
T Consensus 56 ~~~~~~ll~~~~~D~V~i~-------tp~~----~h~~~~~~al~~gk~vl~---------EKP~~~~~~e~~~l~~~a~ 115 (330)
T 3e9m_A 56 YGSYEELCKDETIDIIYIP-------TYNQ----GHYSAAKLALSQGKPVLL---------EKPFTLNAAEAEELFAIAQ 115 (330)
T ss_dssp BSSHHHHHHCTTCSEEEEC-------CCGG----GHHHHHHHHHHTTCCEEE---------CSSCCSSHHHHHHHHHHHH
T ss_pred eCCHHHHhcCCCCCEEEEc-------CCCH----HHHHHHHHHHHCCCeEEE---------eCCCCCCHHHHHHHHHHHH
Confidence 457889988 58999996 3322 234566788999999997 555 667888777776654
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.. ..++.-+- ..--+| +++.+++++.+
T Consensus 116 ~~-g~~~~v~~-~~r~~p--~~~~~k~~i~~ 142 (330)
T 3e9m_A 116 EQ-GVFLMEAQ-KSVFLP--ITQKVKATIQE 142 (330)
T ss_dssp HT-TCCEEECC-SGGGCH--HHHHHHHHHHT
T ss_pred Hc-CCeEEEEE-hhhhCH--HHHHHHHHHhC
Confidence 42 22222222 122234 66777776653
No 232
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=34.30 E-value=1.1e+02 Score=26.98 Aligned_cols=85 Identities=13% Similarity=0.173 Sum_probs=52.4
Q ss_pred hcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccc
Q 024709 20 KNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQAD 99 (264)
Q Consensus 20 ~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d 99 (264)
++++++++-+|.++ ++. .|..-...+..|.++|+|+++.|= --+..+...+..+... -
T Consensus 80 ~dl~~ll~~aDVvI--------DFT---~p~a~~~~~~~~l~~Gv~vViGTT---------G~~~e~~~~L~~aa~~--~ 137 (288)
T 3ijp_A 80 DDPESAFSNTEGIL--------DFS---QPQASVLYANYAAQKSLIHIIGTT---------GFSKTEEAQIADFAKY--T 137 (288)
T ss_dssp SCHHHHTTSCSEEE--------ECS---CHHHHHHHHHHHHHHTCEEEECCC---------CCCHHHHHHHHHHHTT--S
T ss_pred CCHHHHhcCCCEEE--------EcC---CHHHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHHhCc--C
Confidence 46788777677654 232 366677889999999999999762 2234444455555443 2
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 100 ALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 100 ~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.++.+ .+|-+-++ .|-++++++-+++.
T Consensus 138 ~~~~a-----~N~SiGv~-ll~~l~~~aa~~l~ 164 (288)
T 3ijp_A 138 TIVKS-----GNMSLGVN-LLANLVKRAAKALD 164 (288)
T ss_dssp EEEEC-----SCCCHHHH-HHHHHHHHHHHHSC
T ss_pred CEEEE-----CCCcHHHH-HHHHHHHHHHHhcC
Confidence 24444 45555444 45566777666553
No 233
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=34.18 E-value=1.3e+02 Score=21.52 Aligned_cols=72 Identities=7% Similarity=0.119 Sum_probs=41.4
Q ss_pred HHHhcCCcEEEEEc----CCch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHHHHH
Q 024709 164 IANKLKASALFVYT----KTGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFSLLK 237 (264)
Q Consensus 164 lA~~l~A~aIVv~T----~sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~ 237 (264)
...+.+.+.+++-- .+|. ..+.+.+..|..||+.+|....... .-.+..|+.-++.++ .+.++. ...++.+.
T Consensus 44 ~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp-~~~~~L-~~~i~~~~ 121 (133)
T 3b2n_A 44 LIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYVLKE-RSIEEL-VETINKVN 121 (133)
T ss_dssp HHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETT-SCHHHH-HHHHHHHH
T ss_pred HHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEEEECC-CCHHHH-HHHHHHHH
Confidence 33445677666543 3443 3556666678999999997654322 223457888877764 334443 33444443
No 234
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=34.08 E-value=1.4e+02 Score=25.49 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=81.4
Q ss_pred HHHhCCCEEEEhhhhhhhhhCCCC-----ChHHH----HHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHh
Q 024709 59 CRQLNKPVIVASQLLESMIEYPIP-----TRAEV----ADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEK 129 (264)
Q Consensus 59 ~~~~gkpv~~atq~leSM~~~~~p-----trae~----~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~ 129 (264)
|+....||.+ |+. |+. +..|+ .|+..+...|+|++.+..=|..|.--.++.+.+-+.+. .
T Consensus 50 ~~~~~ipV~v-------MIR-PR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~---~ 118 (224)
T 2bdq_A 50 LHEKGISVAV-------MIR-PRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ---G 118 (224)
T ss_dssp HHHTTCEEEE-------ECC-SSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT---T
T ss_pred hhhcCCceEE-------EEC-CCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC---C
Confidence 7888999998 654 422 44554 79999999999999999999999988877776655432 2
Q ss_pred hhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchH-----------HHHHhhcCCCCcEEEE
Q 024709 130 WCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLKASALFVYTKTGQM-----------ASLLSRSRPDCPIFAF 198 (264)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~aIVv~T~sG~t-----------A~~iSr~RP~~PIiAv 198 (264)
. . --+|+.|... ...+. ..+.+...+++.+-|. |..|.. .+++.+..+..-|++-
T Consensus 119 ~-~-vTFHRAFD~~-----~~~d~-----~~ale~L~~lGv~rIL--TSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~G 184 (224)
T 2bdq_A 119 L-P-LVFHMAFDVI-----PKSDQ-----KKSIDQLVALGFTRIL--LHGSSNGEPIIENIKHIKALVEYANNRIEIMVG 184 (224)
T ss_dssp C-C-EEECGGGGGS-----CTTTH-----HHHHHHHHHTTCCEEE--ECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEEC
T ss_pred C-e-EEEECchhcc-----CCcCH-----HHHHHHHHHcCCCEEE--CCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeC
Confidence 1 0 0112222100 01122 2346666777898776 443332 2455666666677763
Q ss_pred cC-ChhhhhhcccccccEEEEec
Q 024709 199 AP-MSSVRRRLNLQWGLVPFCLN 220 (264)
Q Consensus 199 T~-~~~~aR~L~L~~GV~P~~~~ 220 (264)
.- +..-..++.=..|+.-++..
T Consensus 185 gGV~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 185 GGVTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp SSCCTTTHHHHHHHHTCCEEEET
T ss_pred CCCCHHHHHHHHHhhCCCEEccc
Confidence 31 22223333323577666653
No 235
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=34.05 E-value=46 Score=28.63 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=32.6
Q ss_pred hcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 20 KNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 20 ~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
+..+++++.+|.+.|+.|=+ .+.-.....++++.+++.|+|+++
T Consensus 50 ~e~~~~~~~a~~lvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVl 93 (272)
T 1ekq_A 50 EEVADMAKIAGALVLNIGTL-----SKESVEAMIIAGKSANEHGVPVIL 93 (272)
T ss_dssp TTHHHHHHHSSEEEEECTTC-----CHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCEEEEECCCC-----CHHHHHHHHHHHHHHHhcCCeEEE
Confidence 34466777799999976543 234456677888999999999997
No 236
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=33.89 E-value=91 Score=26.24 Aligned_cols=63 Identities=10% Similarity=-0.021 Sum_probs=39.3
Q ss_pred HhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhc
Q 024709 19 LKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQ 97 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g 97 (264)
++.+++..+. +|.|.+.-..+ ... ...+++++.+++.|.++++- ..|..| ...+...|
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~-----------v~t~ee---a~~a~~~G 149 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFR---SRP----VDIDSLLTRIRLHGLLAMAD-----------CSTVNE---GISCHQKG 149 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSS---CCS----SCHHHHHHHHHHTTCEEEEE-----------CSSHHH---HHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECcccc---CCh----HHHHHHHHHHHHCCCEEEEe-----------cCCHHH---HHHHHhCC
Confidence 3445666666 78777653321 111 24567888888889988873 223333 35678899
Q ss_pred ccccc
Q 024709 98 ADALM 102 (264)
Q Consensus 98 ~d~~~ 102 (264)
+|.+-
T Consensus 150 ad~Ig 154 (229)
T 3q58_A 150 IEFIG 154 (229)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 99994
No 237
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=33.89 E-value=29 Score=30.67 Aligned_cols=29 Identities=7% Similarity=0.161 Sum_probs=24.0
Q ss_pred cEEEEEcCCchHHHHHh---hcCCCCcEEEEcCC
Q 024709 171 SALFVYTKTGQMASLLS---RSRPDCPIFAFAPM 201 (264)
Q Consensus 171 ~aIVv~T~sG~tA~~iS---r~RP~~PIiAvT~~ 201 (264)
+.+|++|.||.|...+. ..| ++++++|++
T Consensus 81 dlvI~iS~SG~T~e~l~a~~~ak--a~viaIT~~ 112 (325)
T 2e5f_A 81 ELAVGISRSGETTEILLALEKIN--VKKLGITTR 112 (325)
T ss_dssp SEEEEECSSSCCHHHHHHHHTCC--SCEEEEESS
T ss_pred eEEEEEeCCCCCHHHHHHHHHhC--CCEEEEECC
Confidence 68999999999877654 334 999999996
No 238
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=33.88 E-value=1e+02 Score=27.03 Aligned_cols=84 Identities=13% Similarity=0.104 Sum_probs=54.0
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- .|.|+|+ .|... -..++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 56 ~~~~~~ll~~~~vD~V~i~-------tp~~~----H~~~~~~al~aGkhV~~---------EKPla~~~~e~~~l~~~a~ 115 (352)
T 3kux_A 56 VSDPQMLFNDPSIDLIVIP-------TPNDT----HFPLAQSALAAGKHVVV---------DKPFTVTLSQANALKEHAD 115 (352)
T ss_dssp ESCHHHHHHCSSCCEEEEC-------SCTTT----HHHHHHHHHHTTCEEEE---------CSSCCSCHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEe-------CChHH----HHHHHHHHHHCCCcEEE---------ECCCcCCHHHHHHHHHHHH
Confidence 4688999987 8999996 23222 24567789999999997 667 778888877777655
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
..--.+|. +- ..--+| .++.+++++.+
T Consensus 116 ~~g~~~~v-~~-~~r~~p--~~~~~~~~i~~ 142 (352)
T 3kux_A 116 DAGLLLSV-FH-NRRWDS--DFLTLKTLLAE 142 (352)
T ss_dssp HTTCCEEE-CC-GGGGCH--HHHHHHHHHHH
T ss_pred HcCCeEEE-Ee-ecccCH--HHHHHHHHHhc
Confidence 43112222 11 111234 56777777654
No 239
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=33.80 E-value=23 Score=28.34 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCChh
Q 024709 169 KASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMSS 203 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~~ 203 (264)
.-+.+|++|.||+|...+. |- -.++++++|.+..
T Consensus 109 ~~DvvI~iS~SG~t~~~i~~~~~ak~-~g~~vI~IT~~~~ 147 (196)
T 2yva_A 109 AGDVLLAISTRGNSRDIVKAVEAAVT-RDMTIVALTGYDG 147 (196)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHH-TTCEEEEEECTTC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHH-CCCEEEEEeCCCC
Confidence 3478999999999876543 33 3689999999753
No 240
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=33.65 E-value=32 Score=31.18 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=36.5
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
++.+++. .+||.+. -+|.-.+|......++++.+.|+||+.+||...-.+
T Consensus 238 l~a~~~~g~~GiVle------~~G~Gn~p~~~~~~l~~a~~~Gi~VV~~Src~~G~V 288 (334)
T 3nxk_A 238 AKALFEHGTKGIVVA------GSGAGSIHKNQKDVLKELLKKGLKVVVSSRVVAGCV 288 (334)
T ss_dssp HHHHHHTTCCEEEEE------EBTTTBCCHHHHHHHHHHHTTTCEEEEEESSSBSCC
T ss_pred HHHHHhCCCCEEEEe------eECCCCCcHHHHHHHHHHHHCCCEEEEeCCCCCCcc
Confidence 4555555 8999996 344444445666777888899999999999886654
No 241
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=33.57 E-value=41 Score=31.16 Aligned_cols=58 Identities=22% Similarity=0.355 Sum_probs=41.7
Q ss_pred EEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEE
Q 024709 9 VIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVA 69 (264)
Q Consensus 9 iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~a 69 (264)
+.+-||-..-.-++|+.++-+|-|+-|=|=+=...-.-++|. .+.+.|+++|||||.-
T Consensus 268 l~~Gi~~v~~~~~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~---gVa~~A~~~~vPviai 325 (383)
T 3cwc_A 268 LRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPI---GVANIAKRYNKPVIGI 325 (383)
T ss_dssp EECHHHHHHHHTTHHHHHHHCSEEEECCEESCC----CHHHH---HHHHHHHHTTCCEEEE
T ss_pred EccHHHHHHHHhChHhhhcCCCEEEECCCCCcCcCCCCcHHH---HHHHHHHHhCCCEEEE
Confidence 444455555667899999999999999887755555567664 5667899999999963
No 242
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=33.51 E-value=1.7e+02 Score=24.64 Aligned_cols=94 Identities=13% Similarity=0.098 Sum_probs=58.8
Q ss_pred HHhcHHHHHhhcceeee---cCCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHH
Q 024709 18 SLKNLNEIILASDGAMV---ARGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSE 92 (264)
Q Consensus 18 ~~~n~~eI~~~~Dgi~i---~rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~ 92 (264)
.++.++++++.+|-|++ .||==|-.+ .+....-.+++-+.+.+. +.++.+.. .-.|..+ ..
T Consensus 118 p~~~~~~~l~~~D~VlvmsV~pGfggQ~f-~~~~l~kI~~lr~~~~~~~~~~~I~VdG--------GI~~~~~-----~~ 183 (231)
T 3ctl_A 118 PVEAMKYYIHKADKITVMTVDPGFAGQPF-IPEMLDKLAELKAWREREGLEYEIEVDG--------SCNQATY-----EK 183 (231)
T ss_dssp CGGGGTTTGGGCSEEEEESSCTTCSSCCC-CTTHHHHHHHHHHHHHHHTCCCEEEEES--------CCSTTTH-----HH
T ss_pred cHHHHHHHHhcCCEEEEeeeccCcCCccc-cHHHHHHHHHHHHHHhccCCCceEEEEC--------CcCHHHH-----HH
Confidence 36778888888998884 443223333 245555555666666554 45555532 1234444 56
Q ss_pred HHHhcccccccc-ccccCCCC-hHHHHHHHHHHHH
Q 024709 93 LVRQQADALMLS-GESAMGQF-PDKALAVLRSVSL 125 (264)
Q Consensus 93 ~v~~g~d~~~ls-~eta~G~y-P~eav~~m~~i~~ 125 (264)
++..|+|.+... +--..... |.++++.+++...
T Consensus 184 ~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 184 LMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQIL 218 (231)
T ss_dssp HHHHTCCEEEECTTTTGGGCSSHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEccHHHhCCCCcHHHHHHHHHHHHH
Confidence 778899999987 55444445 9999999877443
No 243
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=33.41 E-value=1.2e+02 Score=27.00 Aligned_cols=48 Identities=13% Similarity=0.151 Sum_probs=33.5
Q ss_pred cEEEEcCChhhhhhcccccccEEEEecCCCC--HHHHHHHHHHHHHHcCC
Q 024709 194 PIFAFAPMSSVRRRLNLQWGLVPFCLNFSDD--MESNLNQTFSLLKARGL 241 (264)
Q Consensus 194 PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~--~e~~i~~al~~~~~~g~ 241 (264)
..+-+.++++....|.-.|.=.++++.+..+ .+..++.|.+.+.+.|.
T Consensus 205 l~L~L~~~PdIL~~l~~~~~p~~~lVGFkaET~~~~l~~~A~~kL~~k~~ 254 (313)
T 1p9o_A 205 LQITMKMVPKLLSPLVKDWAPKAFIISFKLETDPAIVINRARKALEIYQH 254 (313)
T ss_dssp EEEECEECGGGGSCCGGGTCTTSEEEEEECCCCHHHHHHHHHHHHHHHCC
T ss_pred ceEEeecCchHHHHHHhhcCCCcEEEEEEecCCChHHHHHHHHHHHHcCC
Confidence 6899999999999886566323355554433 33478889888887664
No 244
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=33.38 E-value=1.6e+02 Score=24.83 Aligned_cols=91 Identities=11% Similarity=0.067 Sum_probs=54.2
Q ss_pred HHhcHHHHHh--hcceeeecCCCccc---CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH
Q 024709 18 SLKNLNEIIL--ASDGAMVARGDLGA---QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE 92 (264)
Q Consensus 18 ~~~n~~eI~~--~~Dgi~i~rgdL~~---~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~ 92 (264)
.++.+++++. ..|.|++-.-+-|. .+. +....-.+++-+... +.++.+...+ .|. .+..
T Consensus 126 p~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~-~~~l~ki~~lr~~~~--~~~I~VdGGI--------~~~-----ti~~ 189 (227)
T 1tqx_A 126 DVQKLVPILDTNLINTVLVMTVEPGFGGQSFM-HDMMGKVSFLRKKYK--NLNIQVDGGL--------NIE-----TTEI 189 (227)
T ss_dssp CGGGGHHHHTTTCCSEEEEESSCTTCSSCCCC-GGGHHHHHHHHHHCT--TCEEEEESSC--------CHH-----HHHH
T ss_pred cHHHHHHHhhcCCcCEEEEeeeccCCCCcccc-hHHHHHHHHHHHhcc--CCeEEEECCC--------CHH-----HHHH
Confidence 4788899999 79999775433332 222 222222222222221 5566553321 222 3456
Q ss_pred HHHhccccccccccccCCCChHHHHHHHHHHH
Q 024709 93 LVRQQADALMLSGESAMGQFPDKALAVLRSVS 124 (264)
Q Consensus 93 ~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~ 124 (264)
++..|+|.+...+-......|.++++.+++.+
T Consensus 190 ~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~ 221 (227)
T 1tqx_A 190 SASHGANIIVAGTSIFNAEDPKYVIDTMRVSV 221 (227)
T ss_dssp HHHHTCCEEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 77889999998865555567999999987643
No 245
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=33.32 E-value=76 Score=28.01 Aligned_cols=111 Identities=15% Similarity=0.134 Sum_probs=67.3
Q ss_pred ceEEEeccCHHHHhcHHHHHhh-cceeee--cCCCc----ccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhh-hh
Q 024709 7 IAVIAKIESIDSLKNLNEIILA-SDGAMV--ARGDL----GAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESM-IE 78 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~-~Dgi~i--~rgdL----~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM-~~ 78 (264)
+.+.+-..+..+ ++..++. .|.|.| +-.|+ -+....++.....+++++.++++|+.|-..= ++ ..
T Consensus 75 ~~~~~l~~~~~~---i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i----~~~~~ 147 (307)
T 1ydo_A 75 VTYAALVPNQRG---LENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYL----STVFG 147 (307)
T ss_dssp CEEEEECCSHHH---HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEE----ECTTC
T ss_pred CeEEEEeCCHHh---HHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEE----EEEec
Confidence 334343444433 4444444 665544 33332 1223346667778899999999999985321 11 11
Q ss_pred CC---CCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHHHHHHHH
Q 024709 79 YP---IPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAVLRSVSL 125 (264)
Q Consensus 79 ~~---~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~ 125 (264)
++ +-+...+-+++. +...|+|.+.|. +|.=...|.+.-+.++.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G~~~P~~v~~lv~~l~~ 197 (307)
T 1ydo_A 148 CPYEKDVPIEQVIRLSEALFEFGISELSLG-DTIGAANPAQVETVLEALLA 197 (307)
T ss_dssp BTTTBCCCHHHHHHHHHHHHHHTCSCEEEE-CSSCCCCHHHHHHHHHHHHT
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCEEEEc-CCCCCcCHHHHHHHHHHHHH
Confidence 22 234445555555 467899999998 88888899888888777643
No 246
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=33.29 E-value=68 Score=28.10 Aligned_cols=84 Identities=15% Similarity=0.197 Sum_probs=53.8
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++|+++- .|+|+|+ .|. .....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 83 y~d~~ell~~~~iDaV~Ia-------tP~----~~H~~~a~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~ 142 (393)
T 4fb5_A 83 TADWRALIADPEVDVVSVT-------TPN----QFHAEMAIAALEAGKHVWC---------EKPMAPAYADAERMLATAE 142 (393)
T ss_dssp ESCHHHHHHCTTCCEEEEC-------SCG----GGHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCcEEEEC-------CCh----HHHHHHHHHHHhcCCeEEE---------ccCCcccHHHHHHhhhhHH
Confidence 3578999975 8999996 332 2456678888899999998 666 678888877776654
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.- ..++.-+..-.- +| .++.+++++.+
T Consensus 143 ~~-g~~l~vg~~~R~-~p--~~~~~k~~i~~ 169 (393)
T 4fb5_A 143 RS-GKVAALGYNYIQ-NP--VMRHIRKLVGD 169 (393)
T ss_dssp HS-SSCEEECCGGGG-CH--HHHHHHHHHHT
T ss_pred hc-CCcccccccccc-Ch--HHHHHHHHHHc
Confidence 32 222222222111 23 56677776654
No 247
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=33.27 E-value=2.6e+02 Score=24.84 Aligned_cols=121 Identities=16% Similarity=0.233 Sum_probs=69.9
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|.......+...-..|++.+... |.| -++.+...++..+- .+
T Consensus 121 ~a~A~aa~~~G~~~~iv-----------~P~~~~~~k~~~~~~~GA~V~~v~-----~~~-~~~~~~a~~~~~~~-~~-- 180 (366)
T 3iau_A 121 QGVALAGQRLNCVAKIV-----------MPTTTPQIKIDAVRALGGDVVLYG-----KTF-DEAQTHALELSEKD-GL-- 180 (366)
T ss_dssp HHHHHHHHHTTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECC-----SSH-HHHHHHHHHHHHHH-TC--
T ss_pred HHHHHHHHHhCCceEEE-----------eCCCCCHHHHHHHHHCCCeEEEEC-----cCH-HHHHHHHHHHHHhc-CC--
Confidence 34667799999999872 233322334456677899876654 333 45655554443321 11
Q ss_pred cccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHh----hcCCCCcEEEEcCChh
Q 024709 133 EGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKL-KASALFVYTKTGQMASLLS----RSRPDCPIFAFAPMSS 203 (264)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l-~A~aIVv~T~sG~tA~~iS----r~RP~~PIiAvT~~~~ 203 (264)
++..+... +. ........+.++.+++ ..+.|++.+-+|.+.--++ ...|...|+++-++..
T Consensus 181 -------~~i~~~~n--~~-~i~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~ 246 (366)
T 3iau_A 181 -------KYIPPFDD--PG-VIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGA 246 (366)
T ss_dssp -------EECCSSSS--HH-HHHHHHHHHHHHHHHCCSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGG
T ss_pred -------EecCCCCC--hH-HHHHHHHHHHHHHHhcCCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCC
Confidence 11111110 11 1122333355666666 4588999999999866544 4569999999987654
No 248
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=33.24 E-value=1.4e+02 Score=24.17 Aligned_cols=86 Identities=13% Similarity=0.079 Sum_probs=46.3
Q ss_pred HhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhc
Q 024709 19 LKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQ 97 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g 97 (264)
++.+..+.+. +|.|.+..-+.+-...-.. ....+++.+ ..+.|++... ..-+. .|+..+...|
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~-~~~i~~l~~---~~~~pvia~G---------Gi~~~---~~~~~~~~~G 220 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYD-VELIRRVAD---SVRIPVIASG---------GAGRV---EHFYEAAAAG 220 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCC-HHHHHHHHH---HCSSCEEEES---------CCCSH---HHHHHHHHTT
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCC-HHHHHHHHH---hcCCCEEEeC---------CCCCH---HHHHHHHHcC
Confidence 4445566666 8999875433311111112 222333333 3478999854 22222 4566677789
Q ss_pred cccccccccccCCCCh-HHHHHHH
Q 024709 98 ADALMLSGESAMGQFP-DKALAVL 120 (264)
Q Consensus 98 ~d~~~ls~eta~G~yP-~eav~~m 120 (264)
+|++++..---.+..+ .+..++|
T Consensus 221 a~~v~vgsal~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 221 ADAVLAASLFHFRVLSIAQVKRYL 244 (253)
T ss_dssp CSEEEESHHHHTTSSCHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCHHHHHHHH
Confidence 9999997654444443 3444444
No 249
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=33.16 E-value=1.4e+02 Score=21.77 Aligned_cols=76 Identities=9% Similarity=0.017 Sum_probs=45.3
Q ss_pred HHHHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhhh-cccccccEEEEecCCCCHHHHHHHHHHHH
Q 024709 163 KIANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRRR-LNLQWGLVPFCLNFSDDMESNLNQTFSLL 236 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~-L~L~~GV~P~~~~~~~~~e~~i~~al~~~ 236 (264)
....+.+.+.|++-.. +|. ..+.+.+..|..||+.+|........ -.+..|+.-++..+ .+.++. ..++..+
T Consensus 55 ~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp-~~~~~l-~~~i~~~ 132 (152)
T 3eul_A 55 ELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKD-STRTEI-VKAVLDC 132 (152)
T ss_dssp HHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETT-CCHHHH-HHHHHHH
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecC-CCHHHH-HHHHHHH
Confidence 3444556787776533 332 45566677799999999987654322 23567888877754 344444 3445444
Q ss_pred HHcC
Q 024709 237 KARG 240 (264)
Q Consensus 237 ~~~g 240 (264)
.+.+
T Consensus 133 ~~~~ 136 (152)
T 3eul_A 133 AKGR 136 (152)
T ss_dssp HHCC
T ss_pred HcCC
Confidence 4443
No 250
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=33.16 E-value=1.2e+02 Score=26.58 Aligned_cols=81 Identities=14% Similarity=0.223 Sum_probs=44.9
Q ss_pred cceEEEeccCHHHHhcHHHHHhh-cceeee-cCCCcccCCCCCChHHHHHHHHHHHH-HhCCCEEEEhhhhhhhhhCCCC
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA-SDGAMV-ARGDLGAQVPLEQVPSIQEKIVQLCR-QLNKPVIVASQLLESMIEYPIP 82 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~-~Dgi~i-~rgdL~~~~~~~~v~~~qk~ii~~~~-~~gkpv~~atq~leSM~~~~~p 82 (264)
.+.++.++-+.+-.. ...+. +|+|.+ ++ +-|...+....+.. ..+...+ ..+.|++.+..+-
T Consensus 118 gi~vi~~v~t~~~a~---~~~~~GaD~i~v~g~-~~GG~~G~~~~~~~--~~l~~v~~~~~iPviaaGGI~--------- 182 (328)
T 2gjl_A 118 GVKVIHKCTAVRHAL---KAERLGVDAVSIDGF-ECAGHPGEDDIPGL--VLLPAAANRLRVPIIASGGFA--------- 182 (328)
T ss_dssp TCEEEEEESSHHHHH---HHHHTTCSEEEEECT-TCSBCCCSSCCCHH--HHHHHHHTTCCSCEEEESSCC---------
T ss_pred CCCEEeeCCCHHHHH---HHHHcCCCEEEEECC-CCCcCCCCccccHH--HHHHHHHHhcCCCEEEECCCC---------
Confidence 467777777654333 22223 899999 43 22222221111111 2233333 3479999876432
Q ss_pred ChHHHHHHHHHHHhcccccccc
Q 024709 83 TRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 83 trae~~dv~~~v~~g~d~~~ls 104 (264)
+ -.|+..++..|+|+|+++
T Consensus 183 ~---~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 183 D---GRGLVAALALGADAINMG 201 (328)
T ss_dssp S---HHHHHHHHHHTCSEEEES
T ss_pred C---HHHHHHHHHcCCCEEEEC
Confidence 1 236677888899999986
No 251
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=32.97 E-value=19 Score=29.36 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=25.0
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCChh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMSS 203 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~~ 203 (264)
-+.+|++|.||+|...+. |- -.+|+|++|.+..
T Consensus 90 ~DvvI~iS~SG~t~~~i~~~~~ak~-~g~~vI~IT~~~~ 127 (200)
T 1vim_A 90 QDVLVGISGSGETTSVVNISKKAKD-IGSKLVAVTGKRD 127 (200)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHH-HTCEEEEEESCTT
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHH-CCCeEEEEECCCC
Confidence 468999999999866542 33 3689999998763
No 252
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=32.93 E-value=30 Score=28.10 Aligned_cols=72 Identities=11% Similarity=0.102 Sum_probs=42.7
Q ss_pred HHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHH
Q 024709 17 DSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSELV 94 (264)
Q Consensus 17 ~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~~v 94 (264)
++++-+++.....|.|++|- .+....| -.+++..++. ++|+.+ .-|+ . .|.+ ..+..+.
T Consensus 14 ~~~~~~~~~~~~~diie~G~-p~~~~~g--------~~~i~~ir~~~~~~~i~~-~~~~----~--~~~~---~~~~~~~ 74 (211)
T 3f4w_A 14 EAMVFMDKVVDDVDIIEVGT-PFLIREG--------VNAIKAIKEKYPHKEVLA-DAKI----M--DGGH---FESQLLF 74 (211)
T ss_dssp HHHHHHHHHGGGCSEEEECH-HHHHHHT--------THHHHHHHHHCTTSEEEE-EEEE----C--SCHH---HHHHHHH
T ss_pred HHHHHHHHhhcCccEEEeCc-HHHHhcc--------HHHHHHHHHhCCCCEEEE-EEEe----c--cchH---HHHHHHH
Confidence 45566666544588888874 2222223 2456666665 788854 3222 2 2222 2256788
Q ss_pred Hhccccccccccc
Q 024709 95 RQQADALMLSGES 107 (264)
Q Consensus 95 ~~g~d~~~ls~et 107 (264)
..|+|++.+..+.
T Consensus 75 ~~Gad~v~v~~~~ 87 (211)
T 3f4w_A 75 DAGADYVTVLGVT 87 (211)
T ss_dssp HTTCSEEEEETTS
T ss_pred hcCCCEEEEeCCC
Confidence 8999999997663
No 253
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=32.65 E-value=44 Score=28.14 Aligned_cols=91 Identities=15% Similarity=0.160 Sum_probs=54.9
Q ss_pred HhcHHHHHhhcceeeecCCCcccC--CCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHH
Q 024709 19 LKNLNEIILASDGAMVARGDLGAQ--VPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSELV 94 (264)
Q Consensus 19 ~~n~~eI~~~~Dgi~i~rgdL~~~--~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~~v 94 (264)
.+.++++++.+|-|.+..-.-|.. --.+....-.+++-+.+.+. +.|+.+... -.+..+ ....
T Consensus 125 ~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GG--------I~~~~~-----~~~~ 191 (230)
T 1tqj_A 125 LDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGG--------LKPNNT-----WQVL 191 (230)
T ss_dssp GGGGTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESS--------CCTTTT-----HHHH
T ss_pred HHHHHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECC--------cCHHHH-----HHHH
Confidence 556777778899887665444322 11234444455555555443 577776331 233333 4556
Q ss_pred HhccccccccccccCCCChHHHHHHHHH
Q 024709 95 RQQADALMLSGESAMGQFPDKALAVLRS 122 (264)
Q Consensus 95 ~~g~d~~~ls~eta~G~yP~eav~~m~~ 122 (264)
..|+|++...+---....|.++++.+++
T Consensus 192 ~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 192 EAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp HHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred HcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 6799999998766666679888888764
No 254
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=32.34 E-value=31 Score=31.27 Aligned_cols=99 Identities=16% Similarity=0.256 Sum_probs=62.3
Q ss_pred ceEEEeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCE----EEEhhhhh-hhh-hC
Q 024709 7 IAVIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPV----IVASQLLE-SMI-EY 79 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv----~~atq~le-SM~-~~ 79 (264)
+.|.-...+-...+.+.+-++. -+.+|+.-. ++|+++-...-|++++.|+++|..| +.-.. .| ... ..
T Consensus 76 VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS----~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg-~Ed~v~~~~ 150 (323)
T 2isw_A 76 IPICIHLDHGDTLESVKMAIDLGFSSVMIDAS----HHPFDENVRITKEVVAYAHARSVSVEAELGTLGG-IEEDVQNTV 150 (323)
T ss_dssp SCEEEEEEEECSHHHHHHHHHTTCSEEEECCT----TSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC-----------C
T ss_pred CcEEEECCCCCCHHHHHHHHHcCCCeEEecCC----CCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccC-CccCccccc
Confidence 3444444444344444444444 788999744 5688899999999999999999887 22111 11 100 11
Q ss_pred CCCChHHHHHHHHHH-HhccccccccccccCCCCh
Q 024709 80 PIPTRAEVADVSELV-RQQADALMLSGESAMGQFP 113 (264)
Q Consensus 80 ~~ptrae~~dv~~~v-~~g~d~~~ls~eta~G~yP 113 (264)
..-+. .|+..++ .-|+|++-.+--|+-|.|+
T Consensus 151 ~yTdP---eea~~Fv~~TgvD~LAvaiGt~HG~Yk 182 (323)
T 2isw_A 151 QLTEP---QDAKKFVELTGVDALAVAIGTSHGAYK 182 (323)
T ss_dssp CCCCH---HHHHHHHHHHCCSEEEECSSCCSSSBC
T ss_pred ccCCH---HHHHHHHHHHCCCEEEEecCccccccC
Confidence 11222 2335555 4799999999999999997
No 255
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=32.24 E-value=61 Score=28.69 Aligned_cols=58 Identities=10% Similarity=0.043 Sum_probs=35.1
Q ss_pred CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCC--ChHHHHHHHHHHHHHHHhhhh
Q 024709 63 NKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQ--FPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 63 gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~--yP~eav~~m~~i~~~~E~~~~ 132 (264)
+.|+|....+- .-.|+..++..|||+|++..--..+. =+...-+.+..+..+.+.++.
T Consensus 256 ~ipvia~GGI~------------~~~d~~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m~ 315 (332)
T 1vcf_A 256 HLPLVASGGVY------------TGTDGAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALF 315 (332)
T ss_dssp SSCEEEESSCC------------SHHHHHHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 68999865332 23578899999999999976433111 011222455566666665443
No 256
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=32.22 E-value=22 Score=31.62 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=24.4
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCChh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMSS 203 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~~ 203 (264)
-+.+|++|.||.|...+. |-+ .++++++|++..
T Consensus 75 ~dlvI~iS~SG~T~e~l~a~~~ak~~-Ga~~iaIT~~~~ 112 (329)
T 3eua_A 75 KSLVILCSHSGNTPETVKAAAFARGK-GALTIAMTFKPE 112 (329)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 368899999999876553 444 699999997543
No 257
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=32.21 E-value=26 Score=28.22 Aligned_cols=33 Identities=12% Similarity=0.285 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCCh
Q 024709 169 KASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~ 202 (264)
.-+.+|++|.||+|...+. |- -.+|++++|.+.
T Consensus 113 ~~DvvI~iS~SG~t~~~i~~~~~ak~-~g~~vI~IT~~~ 150 (199)
T 1x92_A 113 PGDVLLAISTSGNSANVIQAIQAAHD-REMLVVALTGRD 150 (199)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 3478999999999866442 33 368999999965
No 258
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=32.15 E-value=2e+02 Score=23.68 Aligned_cols=85 Identities=13% Similarity=0.104 Sum_probs=48.0
Q ss_pred HhcHHHHHhh-cceeeecCCCc-ccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHh
Q 024709 19 LKNLNEIILA-SDGAMVARGDL-GAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQ 96 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgdL-~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~ 96 (264)
++.++++.+. ++++++..-+= +...+. + ....+++ ++..+.|++... ..-+.. |+......
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~-~~~i~~l---~~~~~ipvia~G---------GI~~~~---d~~~~~~~ 217 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGY-D-LRLTRMV---AEAVGVPVIASG---------GAGRME---HFLEAFQA 217 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCC-C-HHHHHHH---HHHCSSCEEEES---------CCCSHH---HHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCC-C-HHHHHHH---HHHcCCCEEEeC---------CCCCHH---HHHHHHHC
Confidence 4555666666 89888852111 122222 2 2222333 344589999844 333343 45555567
Q ss_pred ccccccccccccCCC-ChHHHHHHH
Q 024709 97 QADALMLSGESAMGQ-FPDKALAVL 120 (264)
Q Consensus 97 g~d~~~ls~eta~G~-yP~eav~~m 120 (264)
|+|+++...--..+. .|.++.+.+
T Consensus 218 Gadgv~vgsal~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 218 GAEAALAASVFHFGEIPIPKLKRYL 242 (252)
T ss_dssp TCSEEEESHHHHTTSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHH
Confidence 999999987666676 455555543
No 259
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=32.12 E-value=70 Score=27.87 Aligned_cols=84 Identities=17% Similarity=0.228 Sum_probs=53.5
Q ss_pred HHhcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHH
Q 024709 18 SLKNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELV 94 (264)
Q Consensus 18 ~~~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v 94 (264)
...+++++++ -+|.|+|+ .|.. ....++.+|-++||+|++ +.| ..+.+|...+..+.
T Consensus 55 ~~~~~~~ll~~~~~D~V~i~-------tp~~----~h~~~~~~al~aGk~Vl~---------EKP~a~~~~e~~~l~~~a 114 (329)
T 3evn_A 55 AYDKLEDMLADESIDVIYVA-------TINQ----DHYKVAKAALLAGKHVLV---------EKPFTLTYDQANELFALA 114 (329)
T ss_dssp EESCHHHHHTCTTCCEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEC-------CCcH----HHHHHHHHHHHCCCeEEE---------ccCCcCCHHHHHHHHHHH
Confidence 4568899998 58999996 2322 234567788999999997 556 66788877776655
Q ss_pred HhccccccccccccCCC-ChHHHHHHHHHHHHH
Q 024709 95 RQQADALMLSGESAMGQ-FPDKALAVLRSVSLR 126 (264)
Q Consensus 95 ~~g~d~~~ls~eta~G~-yP~eav~~m~~i~~~ 126 (264)
... ...+.-+ -.-. +| +++.+++++.+
T Consensus 115 ~~~-~~~~~v~--~~~r~~p--~~~~~~~~i~~ 142 (329)
T 3evn_A 115 ESC-NLFLMEA--QKSVFIP--MTQVIKKLLAS 142 (329)
T ss_dssp HHT-TCCEEEE--CSSCSSH--HHHHHHHHHHT
T ss_pred HHc-CCEEEEE--EcccCCH--HHHHHHHHHhC
Confidence 442 2222222 1222 35 66777776653
No 260
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=32.12 E-value=47 Score=28.99 Aligned_cols=85 Identities=9% Similarity=0.037 Sum_probs=55.0
Q ss_pred hcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccc
Q 024709 20 KNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQAD 99 (264)
Q Consensus 20 ~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d 99 (264)
++++++++-+|.++-. . .|..-...+..|.++|||+++.| .-.+..+...+..+....
T Consensus 65 ~dl~~ll~~~DVVIDf--------T---~p~a~~~~~~~al~~G~~vVigT---------TG~s~~~~~~L~~aa~~~-- 122 (272)
T 4f3y_A 65 DDIERVCAEADYLIDF--------T---LPEGTLVHLDAALRHDVKLVIGT---------TGFSEPQKAQLRAAGEKI-- 122 (272)
T ss_dssp CCHHHHHHHCSEEEEC--------S---CHHHHHHHHHHHHHHTCEEEECC---------CCCCHHHHHHHHHHTTTS--
T ss_pred CCHHHHhcCCCEEEEc--------C---CHHHHHHHHHHHHHcCCCEEEEC---------CCCCHHHHHHHHHHhccC--
Confidence 6788888878877653 2 36677789999999999999976 234555555555554432
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 100 ALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 100 ~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.++.+ .+|-+-++ .|-++++.+-+++.
T Consensus 123 ~vv~a-----~N~s~Gv~-l~~~~~~~aa~~l~ 149 (272)
T 4f3y_A 123 ALVFS-----ANMSVGVN-VTMKLLEFAAKQFA 149 (272)
T ss_dssp EEEEC-----SCCCHHHH-HHHHHHHHHHHHTS
T ss_pred CEEEE-----CCCCHHHH-HHHHHHHHHHHhcC
Confidence 24444 45555444 45566667666653
No 261
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=31.93 E-value=1.5e+02 Score=21.68 Aligned_cols=62 Identities=13% Similarity=0.212 Sum_probs=37.5
Q ss_pred HHHHHHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhhhcc-cccc-cEEEEecCC
Q 024709 161 AAKIANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRRRLN-LQWG-LVPFCLNFS 222 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~L~-L~~G-V~P~~~~~~ 222 (264)
+.....+.+.+.|++-.. +|. ..+.+.+..|.+||+.+|.......... +..| +.-++..+.
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~ 111 (154)
T 2rjn_A 43 ALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKPW 111 (154)
T ss_dssp HHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEESSC
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeeeCCC
Confidence 334445556787776532 333 3556666679999999998776433322 3344 777766543
No 262
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=31.89 E-value=23 Score=32.14 Aligned_cols=34 Identities=12% Similarity=0.292 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCchHHHHHh-----hcC-CCCcEEEEcCCh
Q 024709 169 KASALFVYTKTGQMASLLS-----RSR-PDCPIFAFAPMS 202 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~iS-----r~R-P~~PIiAvT~~~ 202 (264)
.-+.+|++|.||.|...+. |-+ +.++++++|++.
T Consensus 103 ~~dlvI~iS~SG~T~e~l~a~~~ak~~~~ga~~iaIT~~~ 142 (384)
T 3c3j_A 103 HPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNE 142 (384)
T ss_dssp SCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCT
T ss_pred CCeEEEEEeCCcCCHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3468999999999876553 333 578999999865
No 263
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=31.70 E-value=2.5e+02 Score=24.11 Aligned_cols=110 Identities=10% Similarity=0.013 Sum_probs=66.0
Q ss_pred HHHHHHHHHhcccccccccccc-------CCCChHHHHHHHHHHHHHHHhhhhccccc--ccCCCCCCCCCCCCCchHHH
Q 024709 87 VADVSELVRQQADALMLSGESA-------MGQFPDKALAVLRSVSLRIEKWCREGKQH--ATFEPPPISSSVSAGIPGEI 157 (264)
Q Consensus 87 ~~dv~~~v~~g~d~~~ls~eta-------~G~yP~eav~~m~~i~~~~E~~~~~~~~~--~~~~~~~~~~~~~~~~~~aI 157 (264)
..|+..++..|+|.|++..-++ .+.-+.|.++.+.++++.+-+.-..-..+ ..+..+. ........
T Consensus 82 ~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~-----~~~~~~~~ 156 (295)
T 1ydn_A 82 MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPY-----DGPVTPQA 156 (295)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETT-----TEECCHHH
T ss_pred HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCc-----CCCCCHHH
Confidence 3577889999999999975444 36667788988888887765431110000 0010000 01112334
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCchH-----HHHHhhcC---CCCcEEEEcCC
Q 024709 158 CNGAAKIANKLKASALFVYTKTGQM-----ASLLSRSR---PDCPIFAFAPM 201 (264)
Q Consensus 158 A~aAv~lA~~l~A~aIVv~T~sG~t-----A~~iSr~R---P~~PIiAvT~~ 201 (264)
+...++.+.+.+++.|.+.++.|.. ..++...| |..|+-.-++|
T Consensus 157 ~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn 208 (295)
T 1ydn_A 157 VASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHD 208 (295)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBC
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5566677778899999999888862 33444444 34566666655
No 264
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=31.70 E-value=57 Score=29.67 Aligned_cols=83 Identities=17% Similarity=0.210 Sum_probs=44.8
Q ss_pred cceEEEe-ccCHHHHhcHHHHHhh-cceeeecC-CCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCC
Q 024709 6 NIAVIAK-IESIDSLKNLNEIILA-SDGAMVAR-GDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIP 82 (264)
Q Consensus 6 ~~~iiak-IE~~~~~~n~~eI~~~-~Dgi~i~r-gdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~p 82 (264)
+..|+.| +-+ .+......+. +|+|.|.- |-=....+...+ ....++.+.+. ...|||....+ -
T Consensus 229 ~~PvivK~v~~---~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v~-~~ipVia~GGI---------~ 294 (368)
T 2nli_A 229 GLPVFVKGIQH---PEDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERVN-KRVPIVFDSGV---------R 294 (368)
T ss_dssp SSCEEEEEECS---HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHHT-TSSCEEECSSC---------C
T ss_pred CCCEEEEcCCC---HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHhC-CCCeEEEECCC---------C
Confidence 3567777 323 2333333444 89999941 110112222222 23333333321 25899974422 2
Q ss_pred ChHHHHHHHHHHHhccccccccc
Q 024709 83 TRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 83 trae~~dv~~~v~~g~d~~~ls~ 105 (264)
--.|+..++..|+|+|++..
T Consensus 295 ---~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 295 ---RGEHVAKALASGADVVALGR 314 (368)
T ss_dssp ---SHHHHHHHHHTTCSEEEECH
T ss_pred ---CHHHHHHHHHcCCCEEEECH
Confidence 23588999999999999974
No 265
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=31.65 E-value=1.4e+02 Score=25.49 Aligned_cols=51 Identities=16% Similarity=0.162 Sum_probs=37.1
Q ss_pred hCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHH
Q 024709 62 LNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSL 125 (264)
Q Consensus 62 ~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~ 125 (264)
.++|++....+ .| .++......|+|++.+.+.-..-..|.++++.+.+.+.
T Consensus 190 ~~iPvvAiGGI--------~~-----~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~~~ 240 (243)
T 3o63_A 190 DDKPWFAIGGI--------NA-----QRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALT 240 (243)
T ss_dssp -CCCEEEESSC--------CT-----TTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred CCCCEEEecCC--------CH-----HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 37898874421 22 24567788999999998776677889999998887654
No 266
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=31.63 E-value=25 Score=28.11 Aligned_cols=33 Identities=15% Similarity=0.401 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCCh
Q 024709 169 KASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMS 202 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~ 202 (264)
+-+.+|++|.||+|...+ +|-| .+|++++|.+.
T Consensus 116 ~~d~vI~iS~SG~t~~~~~~~~~ak~~-g~~vI~IT~~~ 153 (198)
T 2xbl_A 116 EGDVLIGYSTSGKSPNILAAFREAKAK-GMTCVGFTGNR 153 (198)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEECSC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 447899999999976544 3433 68999999864
No 267
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=31.55 E-value=1.1e+02 Score=22.24 Aligned_cols=70 Identities=11% Similarity=0.008 Sum_probs=41.6
Q ss_pred cCCcEEEEEcC-Cch----HHHHHhhcCCCCcEEEEcCChhhhhh-cccccccEEEEecCCCCHHHHHHHHHHHHHHc
Q 024709 168 LKASALFVYTK-TGQ----MASLLSRSRPDCPIFAFAPMSSVRRR-LNLQWGLVPFCLNFSDDMESNLNQTFSLLKAR 239 (264)
Q Consensus 168 l~A~aIVv~T~-sG~----tA~~iSr~RP~~PIiAvT~~~~~aR~-L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~~ 239 (264)
...+.|++-.. .|. ..+.+.+..|.+|||.+|........ -.+..|+.-++.++. +.+++ ..++..+.+.
T Consensus 66 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~-~~~~L-~~~i~~~~~~ 141 (146)
T 4dad_A 66 DAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPL-EPRAL-DDALKRAAAQ 141 (146)
T ss_dssp TTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSC-CHHHH-HHHHHHHHHT
T ss_pred CCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCC-CHHHH-HHHHHHHHhh
Confidence 45676666443 222 34455666799999999986543222 245678888877643 44443 4455555543
No 268
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=31.51 E-value=75 Score=25.29 Aligned_cols=77 Identities=5% Similarity=-0.017 Sum_probs=44.2
Q ss_pred HHHHHHhcCCcEEEEEcCCch-HHHHHhhcCC-CCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHHHHH
Q 024709 161 AAKIANKLKASALFVYTKTGQ-MASLLSRSRP-DCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFSLLK 237 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T~sG~-tA~~iSr~RP-~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~ 237 (264)
+.....+...+.++....+|. ..+.+.+. | .+||+.+|....... .-.+..|+.-++.++..+.++. ..++..+.
T Consensus 36 al~~l~~~~~dlvilp~~~g~~~~~~lr~~-~~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~~L-~~~i~~~~ 113 (223)
T 2hqr_A 36 GEYLMDIRNYDLVMVSDKNALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKAL-VARIEARL 113 (223)
T ss_dssp HHHHHTTSCCSEEEECCTTHHHHHHHHHHH-CTTSEEEEEESSCCHHHHHHHHHHTCSEEEETTCSCTHHH-HHHHHHHT
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCCCcEEEEECCCCHHHHHHHHHcCCCEEEECCCCCHHHH-HHHHHHHh
Confidence 334445567787773334554 24444444 7 899999998754322 2346678888877654144443 34454444
Q ss_pred Hc
Q 024709 238 AR 239 (264)
Q Consensus 238 ~~ 239 (264)
..
T Consensus 114 ~~ 115 (223)
T 2hqr_A 114 RF 115 (223)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 269
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=31.39 E-value=1.2e+02 Score=21.23 Aligned_cols=63 Identities=6% Similarity=0.096 Sum_probs=37.3
Q ss_pred HHhcCCcEEEEEc----CCch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHH
Q 024709 165 ANKLKASALFVYT----KTGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESN 228 (264)
Q Consensus 165 A~~l~A~aIVv~T----~sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~ 228 (264)
..+...+.+++-- .+|. ..+.+.+..|.+||+.+|....... .-.+..|+..++.++. +.++.
T Consensus 43 ~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~-~~~~l 111 (124)
T 1srr_A 43 VTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPF-DIDEI 111 (124)
T ss_dssp HHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEEESSC-CHHHH
T ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhccCCC-CHHHH
Confidence 3445677666643 2443 3556666679999999997654321 2235568777776543 34443
No 270
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=31.33 E-value=49 Score=30.23 Aligned_cols=110 Identities=13% Similarity=0.059 Sum_probs=0.0
Q ss_pred cceEEEe-ccCHHHHhcHHHHHhh-cceeeec-CCCccc---------------CCCCCChHHHHHHHHHHHHHh--CCC
Q 024709 6 NIAVIAK-IESIDSLKNLNEIILA-SDGAMVA-RGDLGA---------------QVPLEQVPSIQEKIVQLCRQL--NKP 65 (264)
Q Consensus 6 ~~~iiak-IE~~~~~~n~~eI~~~-~Dgi~i~-rgdL~~---------------~~~~~~v~~~qk~ii~~~~~~--gkp 65 (264)
.+.|+.| +-.-...+......+. +|+|.|+ +|--+. +.+.+....+. .++.. ..|
T Consensus 206 ~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~-----~v~~~~~~ip 280 (365)
T 3sr7_A 206 QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLL-----NAQPLMDKVE 280 (365)
T ss_dssp CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHH-----HHGGGTTTSE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHH-----HHHHhcCCCe
Q ss_pred EEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCC---hHHHHHHHHHHHHHHHhhhh
Q 024709 66 VIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQF---PDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 66 v~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~y---P~eav~~m~~i~~~~E~~~~ 132 (264)
++....+- --.|++.++..|||+|++..--..+.. +....+.+..+.++.+.++.
T Consensus 281 via~GGI~------------~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~ 338 (365)
T 3sr7_A 281 ILASGGIR------------HPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMC 338 (365)
T ss_dssp EEECSSCC------------SHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCC------------CHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
No 271
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=30.85 E-value=87 Score=28.02 Aligned_cols=84 Identities=21% Similarity=0.324 Sum_probs=53.0
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++|+++- +|.|+|+ .|.. .-..++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 53 ~~~~~ell~~~~vD~V~i~-------tp~~----~H~~~~~~al~aGk~Vl~---------EKP~a~~~~e~~~l~~~a~ 112 (387)
T 3moi_A 53 FATLAEMMQHVQMDAVYIA-------SPHQ----FHCEHVVQASEQGLHIIV---------EKPLTLSRDEADRMIEAVE 112 (387)
T ss_dssp ESSHHHHHHHSCCSEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------CSCCCSCHHHHHHHHHHHH
T ss_pred ECCHHHHHcCCCCCEEEEc-------CCcH----HHHHHHHHHHHCCCceee---------eCCccCCHHHHHHHHHHHH
Confidence 3578999986 8999996 3322 235677789999999997 556 667788776666544
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.- ...+..+- ..--+| .++.+++++.+
T Consensus 113 ~~-g~~~~v~~-~~R~~p--~~~~~k~~i~~ 139 (387)
T 3moi_A 113 RA-GVHLVVGT-SRSHDP--VVRTLRAIVQE 139 (387)
T ss_dssp HH-TCCEEECC-CGGGSH--HHHHHHHHHHH
T ss_pred Hh-CCeEEEEe-ccccCH--HHHHHHHHHhc
Confidence 32 11222211 122234 67777777765
No 272
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=30.74 E-value=21 Score=28.86 Aligned_cols=33 Identities=15% Similarity=0.366 Sum_probs=25.3
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCChh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMSS 203 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~~ 203 (264)
-+.+|++|.||.|...+. |-| .++|+++|.+..
T Consensus 93 ~dvvI~iS~sG~t~~~~~~~~~ak~~-g~~vi~IT~~~~ 130 (201)
T 3fxa_A 93 EDILILISKGGNTGELLNLIPACKTK-GSTLIGVTENPD 130 (201)
T ss_dssp TCEEEEECSSSCCHHHHTTHHHHHHH-TCEEEEEESCTT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHc-CCeEEEEECCCC
Confidence 478999999999876553 333 699999998654
No 273
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=30.49 E-value=1e+02 Score=27.66 Aligned_cols=84 Identities=12% Similarity=0.108 Sum_probs=54.5
Q ss_pred HhcHHHHHhh-------cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHH
Q 024709 19 LKNLNEIILA-------SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADV 90 (264)
Q Consensus 19 ~~n~~eI~~~-------~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv 90 (264)
..+++|+++. +|+|+|+- |.. ....++.+|-++||+|++ +.| ..+.+|...+
T Consensus 69 ~~~~~~ll~~~~~~~~~vD~V~i~t-------p~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l 128 (398)
T 3dty_A 69 YADYLSMFEQEARRADGIQAVSIAT-------PNG----THYSITKAALEAGLHVVC---------EKPLCFTVEQAENL 128 (398)
T ss_dssp CSSHHHHHHHHTTCTTCCSEEEEES-------CGG----GHHHHHHHHHHTTCEEEE---------CSCSCSCHHHHHHH
T ss_pred eCCHHHHHhcccccCCCCCEEEECC-------CcH----HHHHHHHHHHHCCCeEEE---------eCCCcCCHHHHHHH
Confidence 4578999986 89999962 221 345778889999999997 555 5677777777
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
..+.... ...+.-+.... -+| .++.+++++.+
T Consensus 129 ~~~a~~~-g~~~~v~~~~r-~~p--~~~~~k~~i~~ 160 (398)
T 3dty_A 129 RELSHKH-NRIVGVTYGYA-GHQ--LIEQAREMIAA 160 (398)
T ss_dssp HHHHHHT-TCCEEECCGGG-GSH--HHHHHHHHHHT
T ss_pred HHHHHHc-CCeEEEEeccc-CCH--HHHHHHHHHhc
Confidence 7765442 22333333222 234 67777777654
No 274
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=30.45 E-value=24 Score=27.91 Aligned_cols=34 Identities=9% Similarity=0.219 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCChh
Q 024709 169 KASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMSS 203 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~~ 203 (264)
+-+.+|++|.||+|...+ +|- -.+|++++|.+..
T Consensus 110 ~~Dvvi~iS~sG~t~~~~~~~~~ak~-~g~~vi~iT~~~~ 148 (188)
T 1tk9_A 110 EKDVLIGISTSGKSPNVLEALKKAKE-LNMLCLGLSGKGG 148 (188)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHH-TTCEEEEEEEGGG
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHH-CCCEEEEEeCCCC
Confidence 457899999999986644 343 3689999998653
No 275
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=30.22 E-value=73 Score=27.43 Aligned_cols=43 Identities=26% Similarity=0.338 Sum_probs=31.3
Q ss_pred HHHhcHH--HHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 17 DSLKNLN--EIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 17 ~~~~n~~--eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
+-++.++ +++..+|.+++. |. ++ ....+++++.+++.|+|+++
T Consensus 121 ~~~~~~~~~~~~~~~~~v~~~-~~----~~----~~~~~~~~~~a~~~g~~v~~ 165 (317)
T 2nwh_A 121 RRLKVRAVREAIIASDFLLCD-AN----LP----EDTLTALGLIARACEKPLAA 165 (317)
T ss_dssp HHHTSHHHHHHHHHCSEEEEE-TT----SC----HHHHHHHHHHHHHTTCCEEE
T ss_pred HHhhhhhhhhHhccCCEEEEe-CC----CC----HHHHHHHHHHHHhcCCeEEE
Confidence 3344455 677779999885 22 22 45678899999999999987
No 276
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=30.02 E-value=3e+02 Score=25.80 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 024709 51 IQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAVLRSVSLRI 127 (264)
Q Consensus 51 ~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~ 127 (264)
-.+..++.++++|+.|.++- |+...+.=+...+-+++. +...|+|.+.|. +|+=+..|-++-+.+..+..+.
T Consensus 128 ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~-DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 128 NMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAELGVDSIALK-DMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp HHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHTTCSEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHCCCCEEEEc-CCCCCcCHHHHHHHHHHHHHhc
Confidence 45788999999999886432 222333335566666665 667899999997 8999999998888877775543
No 277
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=29.81 E-value=31 Score=28.89 Aligned_cols=79 Identities=9% Similarity=0.114 Sum_probs=50.0
Q ss_pred ceEEEeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChH
Q 024709 7 IAVIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRA 85 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptra 85 (264)
-.||+-|=+.+. +++.++. ++.+|+.-||++ -.++++++++++||++++=-.+. ....+++.
T Consensus 10 ~piI~Avr~~~~---l~~al~s~~~~ifll~g~i~----------~l~~~v~~lk~~~K~v~Vh~Dli----~Gls~d~~ 72 (192)
T 3kts_A 10 QSIIPAAHNQKD---MEKILELDLTYMVMLETHVA----------QLKALVKYAQAGGKKVLLHADLV----NGLKNDDY 72 (192)
T ss_dssp CCEEEEESSSHH---HHHHTTSSCCEEEECSEETT----------THHHHHHHHHHTTCEEEEEGGGE----ETCCCSHH
T ss_pred CCEEEEecCHHH---HHHHHcCCCCEEEEecCcHH----------HHHHHHHHHHHcCCeEEEecCch----hccCCcHH
Confidence 357776655443 5555555 899999888772 24678999999999999844333 33344444
Q ss_pred HHHHHHHHHHhcccccccc
Q 024709 86 EVADVSELVRQQADALMLS 104 (264)
Q Consensus 86 e~~dv~~~v~~g~d~~~ls 104 (264)
-+.=+.+ ..++|++.=+
T Consensus 73 ai~fL~~--~~~pdGIIsT 89 (192)
T 3kts_A 73 AIDFLCT--EICPDGIIST 89 (192)
T ss_dssp HHHHHHH--TTCCSEEEES
T ss_pred HHHHHHh--CCCCCEEEeC
Confidence 3322222 3478887765
No 278
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=29.78 E-value=92 Score=28.32 Aligned_cols=82 Identities=23% Similarity=0.324 Sum_probs=47.9
Q ss_pred cceEEE-eccCHHHHhcHHHHHhh-cceeeecCCCccc--------CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhh
Q 024709 6 NIAVIA-KIESIDSLKNLNEIILA-SDGAMVARGDLGA--------QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLES 75 (264)
Q Consensus 6 ~~~iia-kIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~--------~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leS 75 (264)
++.|+. .+-+.+-. ....+. +|+|.++-+- |. ..+.+. ....+.+.+.+...+.|++.+..+-
T Consensus 194 ~~pviv~~v~~~~~a---~~a~~~Gad~I~vg~~~-G~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~-- 266 (404)
T 1eep_A 194 NLDLIAGNIVTKEAA---LDLISVGADCLKVGIGP-GSICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIR-- 266 (404)
T ss_dssp TCEEEEEEECSHHHH---HHHHTTTCSEEEECSSC-STTSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCC--
T ss_pred CCeEEEcCCCcHHHH---HHHHhcCCCEEEECCCC-CcCcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCC--
Confidence 345554 45554333 333344 8999994211 11 112222 3344555555556789999755322
Q ss_pred hhhCCCCChHHHHHHHHHHHhcccccccc
Q 024709 76 MIEYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 76 M~~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
.-.|+..++..|+|+|++.
T Consensus 267 ----------~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 267 ----------FSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp ----------SHHHHHHHHHHTCSEEEEC
T ss_pred ----------CHHHHHHHHHcCCCHHhhC
Confidence 2357789999999999985
No 279
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=29.65 E-value=50 Score=24.17 Aligned_cols=38 Identities=11% Similarity=0.151 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCcEEEEEcCC--------chHHHHHhhcCCCCcEEEE
Q 024709 158 CNGAAKIANKLKASALFVYTKT--------GQMASLLSRSRPDCPIFAF 198 (264)
Q Consensus 158 A~aAv~lA~~l~A~aIVv~T~s--------G~tA~~iSr~RP~~PIiAv 198 (264)
+....+.|+ +++.||+-++. |+++..+.+.-| ||++.+
T Consensus 92 ~~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 137 (138)
T 3idf_A 92 VEMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAP-IPVLIV 137 (138)
T ss_dssp HHHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCS-SCEEEE
T ss_pred HHHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCC-CCEEEe
Confidence 334445555 99988887753 667777776655 888865
No 280
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=29.47 E-value=1.6e+02 Score=21.13 Aligned_cols=61 Identities=8% Similarity=0.107 Sum_probs=38.3
Q ss_pred hcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHH
Q 024709 167 KLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESN 228 (264)
Q Consensus 167 ~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~ 228 (264)
+.+.+.|++-.. +|. ..+.+.+..|.+||+.+|....... .-.+..|+.-++..+ .+.++.
T Consensus 47 ~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp-~~~~~l 113 (143)
T 3jte_A 47 CNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKP-VTAQDL 113 (143)
T ss_dssp TTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESS-CCHHHH
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCC-CCHHHH
Confidence 456777776543 342 3556666779999999998765422 224667888877764 333443
No 281
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=29.44 E-value=94 Score=27.15 Aligned_cols=84 Identities=14% Similarity=0.022 Sum_probs=51.8
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++. +|.|+|+ .|.. ....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 55 ~~~~~~ll~~~~~D~V~i~-------tp~~----~h~~~~~~al~~Gk~vl~---------EKP~a~~~~e~~~l~~~a~ 114 (344)
T 3mz0_A 55 YPNDDSLLADENVDAVLVT-------SWGP----AHESSVLKAIKAQKYVFC---------EKPLATTAEGCMRIVEEEI 114 (344)
T ss_dssp ESSHHHHHHCTTCCEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred eCCHHHHhcCCCCCEEEEC-------CCch----hHHHHHHHHHHCCCcEEE---------cCCCCCCHHHHHHHHHHHH
Confidence 4578899886 8999996 2322 234566688899999997 555 667788776666543
Q ss_pred h-ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 Q-QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~-g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
. |.-.+|..-- .--+| .++.+++++.+
T Consensus 115 ~~g~~~~~v~~~--~r~~p--~~~~~k~~i~~ 142 (344)
T 3mz0_A 115 KVGKRLVQVGFM--RRYDS--GYVQLKEALDN 142 (344)
T ss_dssp HHSSCCEEECCG--GGGSH--HHHHHHHHHHT
T ss_pred HHCCEEEEEecc--cccCH--HHHHHHHHHHc
Confidence 3 3333233211 11234 56677776654
No 282
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=29.34 E-value=92 Score=26.69 Aligned_cols=58 Identities=17% Similarity=0.273 Sum_probs=39.6
Q ss_pred HhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHHh
Q 024709 19 LKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVRQ 96 (264)
Q Consensus 19 ~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~~ 96 (264)
..+++++++-+|.|+|+ .|... ...++..|-++||+|++ +.| ..+.+|...+..+...
T Consensus 57 ~~~~~~ll~~~D~V~i~-------tp~~~----h~~~~~~al~~gk~vl~---------EKP~~~~~~~~~~l~~~a~~ 115 (308)
T 3uuw_A 57 FDSIESLAKKCDCIFLH-------SSTET----HYEIIKILLNLGVHVYV---------DKPLASTVSQGEELIELSTK 115 (308)
T ss_dssp CSCHHHHHTTCSEEEEC-------CCGGG----HHHHHHHHHHTTCEEEE---------CSSSSSSHHHHHHHHHHHHH
T ss_pred cCCHHHHHhcCCEEEEe-------CCcHh----HHHHHHHHHHCCCcEEE---------cCCCCCCHHHHHHHHHHHHH
Confidence 35688888889999996 33332 34556678899999987 434 4566777666665444
No 283
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=29.31 E-value=1.4e+02 Score=22.05 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=33.5
Q ss_pred CCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecC
Q 024709 169 KASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNF 221 (264)
Q Consensus 169 ~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~ 221 (264)
+.+.|++-.. +|. ..+.+.+..|.+|||++|....... .-.+..|+.-++.+.
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP 141 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKP 141 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESS
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCC
Confidence 5676666432 343 3556667779999999998643322 224567888777654
No 284
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=29.30 E-value=31 Score=28.67 Aligned_cols=34 Identities=9% Similarity=0.304 Sum_probs=25.7
Q ss_pred CcEEEEEcCCchHHHHH-----hhc-CCCCcEEEEcCChh
Q 024709 170 ASALFVYTKTGQMASLL-----SRS-RPDCPIFAFAPMSS 203 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~i-----Sr~-RP~~PIiAvT~~~~ 203 (264)
-+.+|++|.||.|...+ +|- +..++++++|.+..
T Consensus 107 ~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~ 146 (220)
T 3etn_A 107 NDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPD 146 (220)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTT
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCC
Confidence 46899999999986644 333 25799999998643
No 285
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=29.26 E-value=1.6e+02 Score=21.05 Aligned_cols=61 Identities=10% Similarity=0.027 Sum_probs=37.3
Q ss_pred HHHHHhcCCcEEEEEcC----Cch-HHHHHhh--cCCCCcEEEEcCChhhhh-hcccccccEEEEecCC
Q 024709 162 AKIANKLKASALFVYTK----TGQ-MASLLSR--SRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFS 222 (264)
Q Consensus 162 v~lA~~l~A~aIVv~T~----sG~-tA~~iSr--~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~ 222 (264)
.....+...+.|++-.. +|. ..+.+.+ ..|.+|||++|....... .-.+..|+.-++..+.
T Consensus 44 ~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~ 112 (142)
T 3cg4_A 44 IDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPF 112 (142)
T ss_dssp HHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSC
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCC
Confidence 34445556776666432 343 3455555 568899999998754322 2245678888776643
No 286
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=29.25 E-value=58 Score=22.91 Aligned_cols=19 Identities=16% Similarity=0.249 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhCCCEEE
Q 024709 50 SIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 50 ~~qk~ii~~~~~~gkpv~~ 68 (264)
...+.+...|+++|.|++.
T Consensus 40 ~~~~~i~~lc~~~~Ip~~~ 58 (82)
T 3v7e_A 40 ILTSSVVSLAEDQGISVSM 58 (82)
T ss_dssp HHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHcCCCEEE
Confidence 6889999999999999997
No 287
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=29.25 E-value=53 Score=27.62 Aligned_cols=50 Identities=18% Similarity=0.294 Sum_probs=37.2
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHH
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRS 122 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~ 122 (264)
+..++.|+++|++|.+=| .-+ ..+.......|+|+++- +||..+.+.+.+
T Consensus 186 ~~~v~~~~~~G~~v~~WT----------Vn~---~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 235 (238)
T 3no3_A 186 PDWVKDCKVLGMTSNVWT----------VDD---PKLMEEMIDMGVDFITT-------DLPEETQKILHS 235 (238)
T ss_dssp TTHHHHHHHTTCEEEEEC----------CCS---HHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEC----------CCC---HHHHHHHHHcCCCEEEC-------CCHHHHHHHHHh
Confidence 578999999999999866 111 23456778899999875 489877776643
No 288
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=29.25 E-value=2e+02 Score=23.47 Aligned_cols=75 Identities=11% Similarity=0.083 Sum_probs=44.5
Q ss_pred HHHHHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHHH
Q 024709 162 AKIANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFSL 235 (264)
Q Consensus 162 v~lA~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~~ 235 (264)
.........+.|++--. +|. ..+.+.+ .|.+|||.+|....... .-.+..|+.-++.++. +.+++ ..+++.
T Consensus 74 l~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~-~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~Kp~-~~~~L-~~~i~~ 150 (249)
T 3q9s_A 74 LIKAREDHPDLILLDLGLPDFDGGDVVQRLRK-NSALPIIVLTARDTVEEKVRLLGLGADDYLIKPF-HPDEL-LARVKV 150 (249)
T ss_dssp HHHHHHSCCSEEEEECCSCHHHHHHHHHHHHT-TCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSC-CHHHH-HHHHHH
T ss_pred HHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHc-CCCCCEEEEECCCCHHHHHHHHHCCCcEEEECCC-CHHHH-HHHHHH
Confidence 34445567787776543 333 2344444 68999999998764322 2346678888877643 44444 345555
Q ss_pred HHHc
Q 024709 236 LKAR 239 (264)
Q Consensus 236 ~~~~ 239 (264)
+...
T Consensus 151 ~l~~ 154 (249)
T 3q9s_A 151 QLRQ 154 (249)
T ss_dssp HHCC
T ss_pred HHhh
Confidence 5543
No 289
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=29.17 E-value=1.6e+02 Score=21.16 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=44.9
Q ss_pred HHHHHHhcCCcEEEEEcC----Cch-HHHHHhh--cCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHH---H
Q 024709 161 AAKIANKLKASALFVYTK----TGQ-MASLLSR--SRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESN---L 229 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T~----sG~-tA~~iSr--~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~---i 229 (264)
+.....+.+.+.|++-.. +|. ..+.+.+ ..|.+||+++|....... .-.+..|+.-++.++..+.++. +
T Consensus 43 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i 122 (144)
T 3kht_A 43 ALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRI 122 (144)
T ss_dssp HHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHH
T ss_pred HHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHH
Confidence 344455667787776543 232 3445555 568999999997643322 2245678888877655244443 4
Q ss_pred HHHHHHHHH
Q 024709 230 NQTFSLLKA 238 (264)
Q Consensus 230 ~~al~~~~~ 238 (264)
..+++....
T Consensus 123 ~~~l~~~~~ 131 (144)
T 3kht_A 123 YAIFSYWLT 131 (144)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 444444433
No 290
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=29.08 E-value=68 Score=28.42 Aligned_cols=84 Identities=14% Similarity=0.208 Sum_probs=52.8
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- +|.|+|+ .|. .....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 54 ~~~~~~ll~~~~vD~V~i~-------tp~----~~H~~~~~~al~aGkhVl~---------EKP~a~~~~ea~~l~~~a~ 113 (362)
T 3fhl_A 54 VRSFKELTEDPEIDLIVVN-------TPD----NTHYEYAGMALEAGKNVVV---------EKPFTSTTKQGEELIALAK 113 (362)
T ss_dssp ESCSHHHHTCTTCCEEEEC-------SCG----GGHHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEe-------CCh----HHHHHHHHHHHHCCCeEEE---------ecCCCCCHHHHHHHHHHHH
Confidence 4678899987 8999996 232 2235667789999999997 556 678888877777655
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.. ...+.-+..-. -+| .++.+++++.+
T Consensus 114 ~~-g~~~~v~~~~R-~~p--~~~~~k~~i~~ 140 (362)
T 3fhl_A 114 KK-GLMLSVYQNRR-WDA--DFLTVRDILAK 140 (362)
T ss_dssp HH-TCCEEEECGGG-GSH--HHHHHHHHHHT
T ss_pred Hc-CCEEEEEecce-eCH--HHHHHHHHHHc
Confidence 42 22222111111 123 66777776654
No 291
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=28.96 E-value=36 Score=27.29 Aligned_cols=56 Identities=25% Similarity=0.223 Sum_probs=41.6
Q ss_pred CHHHHhcHHHHHhh---ccee--eecCCCc----ccCCCCCChHHHHHHHHHHHHHhCCCEEEEh
Q 024709 15 SIDSLKNLNEIILA---SDGA--MVARGDL----GAQVPLEQVPSIQEKIVQLCRQLNKPVIVAS 70 (264)
Q Consensus 15 ~~~~~~n~~eI~~~---~Dgi--~i~rgdL----~~~~~~~~v~~~qk~ii~~~~~~gkpv~~at 70 (264)
+...+.+++++++. .|-| ++|-.|+ .-..+.+++..-.+++++.+++.|.++++.|
T Consensus 56 ~~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~ 120 (240)
T 3mil_A 56 SRWALKILPEILKHESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIG 120 (240)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHhcccCCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 35677788887763 6655 4566688 4455667788888999999999998888855
No 292
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=28.95 E-value=67 Score=26.60 Aligned_cols=52 Identities=23% Similarity=0.350 Sum_probs=30.2
Q ss_pred HHHhcHHHHHhhcceeeecCCCcccCCCCC-ChHHHHH----HHHHHHHHhCCCEEE
Q 024709 17 DSLKNLNEIILASDGAMVARGDLGAQVPLE-QVPSIQE----KIVQLCRQLNKPVIV 68 (264)
Q Consensus 17 ~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~-~v~~~qk----~ii~~~~~~gkpv~~ 68 (264)
+.++.+++.+...+.-.+|=|..|++.... .-...|+ ..++.|.+.|+||++
T Consensus 76 ~~~~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~i 132 (259)
T 1zzm_A 76 VSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVIL 132 (259)
T ss_dssp HHHHHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 455666665543112234446777665332 1235554 456679999999998
No 293
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=28.94 E-value=1e+02 Score=22.12 Aligned_cols=70 Identities=7% Similarity=0.085 Sum_probs=39.8
Q ss_pred cCCcEEEEEcCC--ch----HHHHHhh--cCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHHHHHH
Q 024709 168 LKASALFVYTKT--GQ----MASLLSR--SRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFSLLKA 238 (264)
Q Consensus 168 l~A~aIVv~T~s--G~----tA~~iSr--~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~ 238 (264)
.+.+.|++--.- |. ..+.+.+ ..|.+||+.+|....... .-.+..|+.-++.++.. .++ +..+++.+.+
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~-~~~-l~~~i~~~~~ 126 (140)
T 3lua_A 49 DSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYP-TKR-LENSVRSVLK 126 (140)
T ss_dssp CCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCC-TTH-HHHHHHHHHC
T ss_pred CCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCC-HHH-HHHHHHHHHH
Confidence 556766664332 22 2445555 678999999997654322 22356788888776543 233 3344544444
Q ss_pred c
Q 024709 239 R 239 (264)
Q Consensus 239 ~ 239 (264)
.
T Consensus 127 ~ 127 (140)
T 3lua_A 127 I 127 (140)
T ss_dssp C
T ss_pred h
Confidence 3
No 294
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=28.89 E-value=1.4e+02 Score=25.81 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=31.3
Q ss_pred hhhhcccc-cccEE--EEe-cCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEec
Q 024709 204 VRRRLNLQ-WGLVP--FCL-NFSDDMESNLNQTFSLLKARGLIKSGDLIIVVSD 253 (264)
Q Consensus 204 ~aR~L~L~-~GV~P--~~~-~~~~~~e~~i~~al~~~~~~g~~~~GD~VVvvsG 253 (264)
..++.... +||-+ ++. +.+.+..++..++.+.+.++|+ .++.+++|+.
T Consensus 101 ~m~~~l~~~~GVp~~~IllE~~S~nT~ENa~~s~~ll~~~g~--~~~~iiLVTs 152 (266)
T 3ca8_A 101 ILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVE--RVHTAIVVQD 152 (266)
T ss_dssp HHHHHHHHTTCCCGGGEEEECCCCSHHHHHHHHHHHHHTCSS--CCSCEEEECC
T ss_pred HHHHHHHHhcCCCHHHEEeCCCCccHHHHHHHHHHHHHhcCC--CCCeEEEECC
Confidence 34444444 48854 344 4456788888888899998886 4455666665
No 295
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=28.73 E-value=1.6e+02 Score=20.93 Aligned_cols=64 Identities=8% Similarity=0.052 Sum_probs=38.6
Q ss_pred HHHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhh-hhcccccccEEEEecCCCCHHHH
Q 024709 164 IANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVR-RRLNLQWGLVPFCLNFSDDMESN 228 (264)
Q Consensus 164 lA~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~a-R~L~L~~GV~P~~~~~~~~~e~~ 228 (264)
...+.+.+.|++-.. +|. ..+.+.+..|..||+++|...... ..-.+..|+.-++.++ .+.++.
T Consensus 46 ~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP-~~~~~l 115 (137)
T 3hdg_A 46 LFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKP-IEPGRL 115 (137)
T ss_dssp HHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSS-CCHHHH
T ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeEcCC-CCHHHH
Confidence 334456776666543 332 355666677999999999876532 2224667888776654 334443
No 296
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=28.51 E-value=73 Score=26.70 Aligned_cols=94 Identities=17% Similarity=0.128 Sum_probs=53.6
Q ss_pred EeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHH
Q 024709 11 AKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVA 88 (264)
Q Consensus 11 akIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~ 88 (264)
-|+++++ +-++..+++ +||+.+.-.-. -+ +. -.+.+++++++|+-++++. +| .|...
T Consensus 69 lmv~dp~--~~i~~~~~aGadgv~vh~e~~---~~-~~----~~~~~~~i~~~g~~~gv~~--------~p~t~~e~--- 127 (230)
T 1tqj_A 69 LMIVEPE--KYVEDFAKAGADIISVHVEHN---AS-PH----LHRTLCQIRELGKKAGAVL--------NPSTPLDF--- 127 (230)
T ss_dssp EESSSGG--GTHHHHHHHTCSEEEEECSTT---TC-TT----HHHHHHHHHHTTCEEEEEE--------CTTCCGGG---
T ss_pred EEccCHH--HHHHHHHHcCCCEEEECcccc---cc-hh----HHHHHHHHHHcCCcEEEEE--------eCCCcHHH---
Confidence 5677763 245666666 89998862200 11 22 3477888999999999964 22 33111
Q ss_pred HHHHHHHhcccccccc-cc--ccCCCChHHHHHHHHHHHHHH
Q 024709 89 DVSELVRQQADALMLS-GE--SAMGQFPDKALAVLRSVSLRI 127 (264)
Q Consensus 89 dv~~~v~~g~d~~~ls-~e--ta~G~yP~eav~~m~~i~~~~ 127 (264)
...+.+|+|.+.+. -+ +..-+|+-...+.++++.+..
T Consensus 128 --~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~ 167 (230)
T 1tqj_A 128 --LEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMC 167 (230)
T ss_dssp --GTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHH
T ss_pred --HHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHH
Confidence 34566799977442 12 222356656666666655444
No 297
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=28.48 E-value=60 Score=30.29 Aligned_cols=62 Identities=16% Similarity=0.274 Sum_probs=43.4
Q ss_pred cceEEEecc--CHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEh
Q 024709 6 NIAVIAKIE--SIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVAS 70 (264)
Q Consensus 6 ~~~iiakIE--~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~at 70 (264)
++.++|-|= -+.++..+++..+..|.+=|.||.+|- ..+-.+--+.+++.|+++|+|+=+-+
T Consensus 81 ~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~---~~k~~e~~~~vv~~ak~~~~pIRIGV 144 (406)
T 4g9p_A 81 EVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGR---GRHKDEHFAEMIRIAMDLGKPVRIGA 144 (406)
T ss_dssp CCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCS---THHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCc---cccHHHHHHHHHHHHHHccCCceecc
Confidence 445555542 244666677777778999999998762 12234455789999999999976654
No 298
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=28.46 E-value=75 Score=28.14 Aligned_cols=63 Identities=19% Similarity=0.317 Sum_probs=44.9
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCC-CChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPI-PTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~-ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
+++.+.| ..||+++.- +. +++.=...+..++..|++++......-....|...++.+..++.+
T Consensus 216 ~~vv~~~---~vPVv~~GG--------~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~~ivh~ 279 (295)
T 3glc_A 216 ERIVAGC---PVPIVIAGG--------KKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHH 279 (295)
T ss_dssp HHHHHTC---SSCEEEECC--------SCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhC---CCcEEEEEC--------CCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHHHHHhC
Confidence 4444444 578887542 11 222224677889999999999988777778999999999988765
No 299
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=28.43 E-value=2.1e+02 Score=22.98 Aligned_cols=67 Identities=18% Similarity=0.186 Sum_probs=45.5
Q ss_pred HHhcHHHHHhh-cceeeecCCCcccCCCCCCh---HHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHH
Q 024709 18 SLKNLNEIILA-SDGAMVARGDLGAQVPLEQV---PSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSEL 93 (264)
Q Consensus 18 ~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v---~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~ 93 (264)
.++.++..++. +|.|.+.-.|. +...+ ...-+.+-+.|+..|.|+++- . ++..+
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~----~~~~~~~~~~~~~~l~~~~~~~~v~v~v~-------------~-----~~~~a 90 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGG----DALTGEARIKFAEKAQAACREAGVPFIVN-------------D-----DVELA 90 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCST----TCCCHHHHHHHHHHHHHHHHHHTCCEEEE-------------S-----CHHHH
T ss_pred HHHHHHHHHHCCCCEEEEecCCC----CHhHHHHHHHHHHHHHHHHHHcCCeEEEc-------------C-----HHHHH
Confidence 44556666666 89988864332 23555 666677778888899999872 1 12356
Q ss_pred HHhcccccccccc
Q 024709 94 VRQQADALMLSGE 106 (264)
Q Consensus 94 v~~g~d~~~ls~e 106 (264)
...|+|++.|..+
T Consensus 91 ~~~gad~v~l~~~ 103 (227)
T 2tps_A 91 LNLKADGIHIGQE 103 (227)
T ss_dssp HHHTCSEEEECTT
T ss_pred HHcCCCEEEECCC
Confidence 6789999998544
No 300
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=28.36 E-value=37 Score=30.53 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=24.7
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCCh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~ 202 (264)
-+.+|++|.||.|...+. |-+-+++++++|++.
T Consensus 100 ~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~ 137 (368)
T 1moq_A 100 NSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVP 137 (368)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESST
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 368999999999877554 333128999999865
No 301
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=28.24 E-value=90 Score=27.69 Aligned_cols=84 Identities=15% Similarity=0.167 Sum_probs=52.8
Q ss_pred HhcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++ -.|.|+|+ .|.. .-..++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 56 ~~~~~~ll~~~~~D~V~i~-------tp~~----~H~~~~~~al~aGk~Vl~---------EKPla~~~~e~~~l~~~a~ 115 (364)
T 3e82_A 56 IASPEAAVQHPDVDLVVIA-------SPNA----THAPLARLALNAGKHVVV---------DKPFTLDMQEARELIALAE 115 (364)
T ss_dssp ESCHHHHHTCTTCSEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEe-------CChH----HHHHHHHHHHHCCCcEEE---------eCCCcCCHHHHHHHHHHHH
Confidence 367899998 48999996 2322 234566788999999997 556 667888777777655
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.. ..++.-+.. .--+| .++.+++++.+
T Consensus 116 ~~-g~~~~v~~~-~r~~p--~~~~~~~~i~~ 142 (364)
T 3e82_A 116 EK-QRLLSVFHN-RRWDS--DYLGIRQVIEQ 142 (364)
T ss_dssp HT-TCCEEECCC-CTTCH--HHHHHHHHHHH
T ss_pred Hh-CCeEEEEee-cccCH--HHHHHHHHHHc
Confidence 42 222221111 11234 56777777664
No 302
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=28.06 E-value=1.3e+02 Score=26.69 Aligned_cols=83 Identities=13% Similarity=0.099 Sum_probs=52.7
Q ss_pred hcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHHh
Q 024709 20 KNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVRQ 96 (264)
Q Consensus 20 ~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~~ 96 (264)
.+++++++- .|.|+|+-.. .. -..++.+|-++||+|++ +.| ..+.+|...+..+...
T Consensus 73 ~~~~~ll~~~~iD~V~i~tp~-------~~----h~~~~~~al~~Gk~V~~---------EKP~a~~~~~~~~l~~~a~~ 132 (383)
T 3oqb_A 73 TDLDAALADKNDTMFFDAATT-------QA----RPGLLTQAINAGKHVYC---------EKPIATNFEEALEVVKLANS 132 (383)
T ss_dssp SCHHHHHHCSSCCEEEECSCS-------SS----SHHHHHHHHTTTCEEEE---------CSCSCSSHHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCCCEEEECCCc-------hH----HHHHHHHHHHCCCeEEE---------cCCCCCCHHHHHHHHHHHHH
Confidence 678999986 8999986332 11 25678899999999997 555 4777887777665443
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 97 QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 97 g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
- ...+.-+.. ..-+| .++.+++++.+
T Consensus 133 ~-~~~~~v~~~-~r~~p--~~~~~~~~i~~ 158 (383)
T 3oqb_A 133 K-GVKHGTVQD-KLFLP--GLKKIAFLRDS 158 (383)
T ss_dssp T-TCCEEECCG-GGGSH--HHHHHHHHHHT
T ss_pred c-CCeEEEEec-cccCH--HHHHHHHHHHc
Confidence 2 222222222 22334 56777776654
No 303
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=28.05 E-value=1.2e+02 Score=26.01 Aligned_cols=44 Identities=11% Similarity=0.034 Sum_probs=34.7
Q ss_pred ChHHH-HHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 83 TRAEV-ADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 83 trae~-~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
|..+. ..+..++..|+|++......-....|.++++.+.++..+
T Consensus 209 ~~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp~~~~~~l~~~v~~ 253 (263)
T 1w8s_A 209 TEEDFLKQVEGVLEAGALGIAVGRNVWQRRDALKFARALAELVYG 253 (263)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEESHHHHTSTTHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHcCCeEEEEehhhcCCcCHHHHHHHHHHHHhc
Confidence 44443 467778889999999888888889999999998887643
No 304
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=28.00 E-value=92 Score=27.07 Aligned_cols=84 Identities=25% Similarity=0.294 Sum_probs=52.6
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- +|.|+|+ .|.. ....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 55 ~~~~~~ll~~~~vD~V~i~-------tp~~----~H~~~~~~al~~GkhVl~---------EKP~a~~~~e~~~l~~~a~ 114 (334)
T 3ohs_X 55 YGSYEELAKDPNVEVAYVG-------TQHP----QHKAAVMLCLAAGKAVLC---------EKPMGVNAAEVREMVTEAR 114 (334)
T ss_dssp ESSHHHHHHCTTCCEEEEC-------CCGG----GHHHHHHHHHHTTCEEEE---------ESSSSSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEC-------CCcH----HHHHHHHHHHhcCCEEEE---------ECCCCCCHHHHHHHHHHHH
Confidence 4578899984 9999996 2322 235667788999999997 555 567788777777654
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.. ..++.-+-.. --+| .++.+++++.+
T Consensus 115 ~~-~~~~~v~~~~-r~~p--~~~~~k~~i~~ 141 (334)
T 3ohs_X 115 SR-GLFLMEAIWT-RFFP--ASEALRSVLAQ 141 (334)
T ss_dssp HT-TCCEEEECGG-GGSH--HHHHHHHHHHH
T ss_pred Hh-CCEEEEEEhH-hcCH--HHHHHHHHHhc
Confidence 42 2222222111 1124 56777776654
No 305
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=27.95 E-value=28 Score=31.30 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=25.3
Q ss_pred CcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCChh
Q 024709 170 ASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMSS 203 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~~ 203 (264)
-+.+|++|.||.|...+ +|-+ .++++++|++..
T Consensus 83 ~dlvI~iS~SG~T~e~l~a~~~ak~~-ga~~iaIT~~~~ 120 (352)
T 3g68_A 83 NTLVVGVSQGGSSYSTYNAMKLAEDK-GCKIASMAGCKN 120 (352)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHT-TCEEEEEESSTT
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 46899999999987655 3444 699999997543
No 306
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=27.90 E-value=1.1e+02 Score=26.90 Aligned_cols=58 Identities=19% Similarity=0.213 Sum_probs=37.1
Q ss_pred cHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccc
Q 024709 21 NLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQAD 99 (264)
Q Consensus 21 n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d 99 (264)
.++.+++. +|.|.++-|+ | ..+++.+++.|.|++... .+. .+...+...|+|
T Consensus 94 ~~~~~~~~g~d~V~l~~g~-----p--------~~~~~~l~~~g~~v~~~v-----------~s~---~~a~~a~~~GaD 146 (326)
T 3bo9_A 94 LVKVCIEEKVPVVTFGAGN-----P--------TKYIRELKENGTKVIPVV-----------ASD---SLARMVERAGAD 146 (326)
T ss_dssp HHHHHHHTTCSEEEEESSC-----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCS
T ss_pred HHHHHHHCCCCEEEECCCC-----c--------HHHHHHHHHcCCcEEEEc-----------CCH---HHHHHHHHcCCC
Confidence 34444444 7888876542 2 245677888899988721 222 234567789999
Q ss_pred cccccc
Q 024709 100 ALMLSG 105 (264)
Q Consensus 100 ~~~ls~ 105 (264)
++.+.+
T Consensus 147 ~i~v~g 152 (326)
T 3bo9_A 147 AVIAEG 152 (326)
T ss_dssp CEEEEC
T ss_pred EEEEEC
Confidence 999965
No 307
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=27.81 E-value=29 Score=31.11 Aligned_cols=33 Identities=6% Similarity=0.160 Sum_probs=24.9
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCChh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMSS 203 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~~ 203 (264)
-+.+|++|.||.|...+. |-+ .++++++|++..
T Consensus 92 ~dlvI~iS~SG~T~e~l~a~~~ak~~-Ga~~iaIT~~~~ 129 (344)
T 3fj1_A 92 RALCLAVSQSGKSPDIVAMTRNAGRD-GALCVALTNDAA 129 (344)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHC-CCcEEEEECCCC
Confidence 368999999999876553 444 699999997543
No 308
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=27.78 E-value=1.8e+02 Score=26.22 Aligned_cols=123 Identities=11% Similarity=0.159 Sum_probs=67.3
Q ss_pred HHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 53 EKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 53 k~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
.-+...|++.|.++.+- .|..+...-+...-..|++.+...+ .| -++++...+++.+- .+
T Consensus 125 ~a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~~~~~~-g~-- 184 (398)
T 4d9i_A 125 RGVAWAAQQLGQNAVIY-----------MPKGSAQERVDAILNLGAECIVTDM-----NY-DDTVRLTMQHAQQH-GW-- 184 (398)
T ss_dssp HHHHHHHHHHTCEEEEE-----------ECTTCCHHHHHHHHTTTCEEEECSS-----CH-HHHHHHHHHHHHHH-TC--
T ss_pred HHHHHHHHHcCCCEEEE-----------EeCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHHc-CC--
Confidence 45677899999999873 2222222334455678999876653 23 46666555543321 11
Q ss_pred cccccccCCCCCC-CCCCC---CCchHHHHHHHHHHHHhcC-----CcEEEEEcCCchHHHHHhhc------CCCCcEEE
Q 024709 133 EGKQHATFEPPPI-SSSVS---AGIPGEICNGAAKIANKLK-----ASALFVYTKTGQMASLLSRS------RPDCPIFA 197 (264)
Q Consensus 133 ~~~~~~~~~~~~~-~~~~~---~~~~~aIA~aAv~lA~~l~-----A~aIVv~T~sG~tA~~iSr~------RP~~PIiA 197 (264)
++..+. ..... .....--...+.++.++++ .+.||+.+-+|.++--++++ .|...|++
T Consensus 185 -------~~v~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vig 257 (398)
T 4d9i_A 185 -------EVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSII 257 (398)
T ss_dssp -------EECCSSCBTTBCHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred -------EEecCcccCCcCCCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 111110 00000 0111112223335555553 68999999999987766543 36788999
Q ss_pred EcCCh
Q 024709 198 FAPMS 202 (264)
Q Consensus 198 vT~~~ 202 (264)
+-++.
T Consensus 258 Vep~~ 262 (398)
T 4d9i_A 258 VEPDK 262 (398)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 87644
No 309
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=27.67 E-value=35 Score=30.84 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=25.4
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCCh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~ 202 (264)
-+.+|++|.||.|...+. |-+..++++++|++.
T Consensus 98 ~dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~ 135 (373)
T 2aml_A 98 LDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDV 135 (373)
T ss_dssp CCEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCT
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999999999876553 333268999999976
No 310
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=27.67 E-value=2.1e+02 Score=25.52 Aligned_cols=141 Identities=11% Similarity=0.057 Sum_probs=76.3
Q ss_pred HHHHHHHhccccccccccccCC-CChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCC-CCCchHHHHHHHHHHHH
Q 024709 89 DVSELVRQQADALMLSGESAMG-QFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSV-SAGIPGEICNGAAKIAN 166 (264)
Q Consensus 89 dv~~~v~~g~d~~~ls~eta~G-~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~-~~~~~~aIA~aAv~lA~ 166 (264)
+|..++..|+|++-+.--...| .+-.+.++.+.+++.++++|=.-.- -+.+..+...... ...-.+.++.+ +.+|.
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~-~ep~~y~r~gg~v~~~~dp~~Va~a-aRiAa 210 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIM-LEPFMSNWVNGKVVNDLSTDAVIQS-VAIAA 210 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEE-EEEEEEEEETTEEEECCSHHHHHHH-HHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEE-EEeeccccCCCCcCCCCCHHHHHHH-HHHHH
Confidence 8889999999996522111222 3556777888888888877511000 0000000000000 11224555554 67799
Q ss_pred hcCCc----EEEEEcCCchHHHHHhhcCCCCcEEEEcCC-----hhhhhhc--ccc-cccEEEEec---C---CCCHHHH
Q 024709 167 KLKAS----ALFVYTKTGQMASLLSRSRPDCPIFAFAPM-----SSVRRRL--NLQ-WGLVPFCLN---F---SDDMESN 228 (264)
Q Consensus 167 ~l~A~----aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~-----~~~aR~L--~L~-~GV~P~~~~---~---~~~~e~~ 228 (264)
.++|+ .|=+.=. ....+-++.. | +|++...-. +.+.+++ .+- -|..-+.+. | ..++..+
T Consensus 211 ELGADs~~tivK~~y~-e~f~~Vv~a~-~-vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~~ 287 (307)
T 3fok_A 211 GLGNDSSYTWMKLPVV-EEMERVMEST-T-MPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAA 287 (307)
T ss_dssp TCSSCCSSEEEEEECC-TTHHHHGGGC-S-SCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHHH
T ss_pred HhCCCcCCCEEEeCCc-HHHHHHHHhC-C-CCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHHH
Confidence 99999 6644322 3345555544 3 788876533 3444444 355 588887764 2 3567666
Q ss_pred HHHHHH
Q 024709 229 LNQTFS 234 (264)
Q Consensus 229 i~~al~ 234 (264)
+.....
T Consensus 288 v~al~~ 293 (307)
T 3fok_A 288 VDTAAR 293 (307)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 654433
No 311
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=27.56 E-value=78 Score=29.50 Aligned_cols=38 Identities=18% Similarity=0.412 Sum_probs=28.0
Q ss_pred CCC-EEEEhhhhhhhhhCCCCChHHHHHHHHHH-Hhcccccccccccc
Q 024709 63 NKP-VIVASQLLESMIEYPIPTRAEVADVSELV-RQQADALMLSGESA 108 (264)
Q Consensus 63 gkp-v~~atq~leSM~~~~~ptrae~~dv~~~v-~~g~d~~~ls~eta 108 (264)
.+| |++ ...|.-+..++.+++.++ ..|+|++.+++=|.
T Consensus 268 ~~P~V~V--------Ki~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 268 KKPLVFV--------KLAPDLNQEQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp SCCEEEE--------EECSCCCHHHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred CCCeEEE--------EecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 689 776 234555666788888855 56999999998664
No 312
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=27.53 E-value=89 Score=28.03 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=23.4
Q ss_pred cceeeecCCCcccCCCCCChHHHHHHH---HHHHHHhCCCEEEE
Q 024709 29 SDGAMVARGDLGAQVPLEQVPSIQEKI---VQLCRQLNKPVIVA 69 (264)
Q Consensus 29 ~Dgi~i~rgdL~~~~~~~~v~~~qk~i---i~~~~~~gkpv~~a 69 (264)
.|.|+++ ||| .+-+.+. +..++.. +++....|.||++.
T Consensus 61 ~D~Vlia-GDl-~d~~~p~-~~~~~~~~~~l~~L~~~~~pv~~v 101 (386)
T 3av0_A 61 PDVVLHS-GDL-FNDLRPP-VKALRIAMQAFKKLHENNIKVYIV 101 (386)
T ss_dssp CSEEEEC-SCS-BSSSSCC-HHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEC-CCC-CCCCCCC-HHHHHHHHHHHHHHHhcCCcEEEE
Confidence 8999998 999 4444333 2333333 44444558998763
No 313
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=27.51 E-value=1e+02 Score=27.22 Aligned_cols=84 Identities=10% Similarity=0.219 Sum_probs=51.7
Q ss_pred HhcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++ -+|.|+|+ .|. .....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 54 ~~~~~~ll~~~~~D~V~i~-------tp~----~~h~~~~~~al~aGkhVl~---------EKP~a~~~~ea~~l~~~a~ 113 (359)
T 3e18_A 54 YESYEAVLADEKVDAVLIA-------TPN----DSHKELAISALEAGKHVVC---------EKPVTMTSEDLLAIMDVAK 113 (359)
T ss_dssp CSCHHHHHHCTTCCEEEEC-------SCG----GGHHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHHH
T ss_pred eCCHHHHhcCCCCCEEEEc-------CCc----HHHHHHHHHHHHCCCCEEe---------eCCCcCCHHHHHHHHHHHH
Confidence 357899998 48999996 232 2245567788899999997 555 567777776666544
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.. ..++.-+.. .--+| .++.+++++.+
T Consensus 114 ~~-g~~~~v~~~-~r~~p--~~~~~k~~i~~ 140 (359)
T 3e18_A 114 RV-NKHFMVHQN-RRWDE--DFLIIKEMFEQ 140 (359)
T ss_dssp HH-TCCEEEECG-GGGCH--HHHHHHHHHHH
T ss_pred Hh-CCeEEEEee-eccCH--HHHHHHHHHHc
Confidence 32 122222111 11224 56777777654
No 314
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=27.46 E-value=74 Score=27.68 Aligned_cols=53 Identities=13% Similarity=0.308 Sum_probs=35.0
Q ss_pred cceEEEecc-CH---HHHhcH-HHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 6 NIAVIAKIE-SI---DSLKNL-NEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 6 ~~~iiakIE-~~---~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
++.++.|.- ++ -|++++ ++..+. +||+++. || |.++ ..+.++.|+++|...+.
T Consensus 95 ~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~--Dl----p~ee----~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 95 DMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIA--DV----PVEE----SAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp TCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEEC
T ss_pred CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeC--CC----CHhh----HHHHHHHHHHcCCeEEE
Confidence 455666654 43 366665 555555 9999994 55 4444 56788999999987663
No 315
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=27.44 E-value=23 Score=31.88 Aligned_cols=32 Identities=13% Similarity=0.273 Sum_probs=22.8
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCCh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~ 202 (264)
-+.+|++|.||.|...+. |-+ .++++++|++.
T Consensus 90 ~dlvI~iS~SG~T~e~l~a~~~ak~~-Ga~~iaIT~~~ 126 (347)
T 3fkj_A 90 NSVVILASQQGNTAETVAAARVAREK-GAATIGLVYQP 126 (347)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHH-TCEEEEEESST
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 357888899998866553 333 68899988654
No 316
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=27.42 E-value=28 Score=28.54 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCChh
Q 024709 169 KASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMSS 203 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~~ 203 (264)
+-+.+|++|.||+|...+ +|-| .+|++++|.+..
T Consensus 114 ~~Dvvi~iS~SG~t~~~~~~~~~ak~~-g~~vi~iT~~~~ 152 (201)
T 3trj_A 114 EDDILLVITTSGDSENILSAVEEAHDL-EMKVIALTGGSG 152 (201)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEEETTC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHC-CCcEEEEECCCC
Confidence 347899999999987654 3433 799999997643
No 317
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=27.41 E-value=33 Score=30.75 Aligned_cols=32 Identities=13% Similarity=0.287 Sum_probs=22.5
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCCh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~ 202 (264)
-+.+|++|.||.|...+. |-+ .++++++|++.
T Consensus 103 ~dlvI~iS~SG~t~e~~~a~~~ak~~-Ga~vi~IT~~~ 139 (355)
T 2a3n_A 103 DSVVITLSKSGDTKESVAIAEWCKAQ-GIRVVAITKNA 139 (355)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHT-TCEEEEEESCT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 357888888888766543 333 57888888764
No 318
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=27.40 E-value=1e+02 Score=26.68 Aligned_cols=83 Identities=14% Similarity=0.232 Sum_probs=50.1
Q ss_pred hcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHHh
Q 024709 20 KNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVRQ 96 (264)
Q Consensus 20 ~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~~ 96 (264)
.+++++++ -+|.|+|+ .|.. ....++..|-++||+|++ ..| ..+.+|...+..+...
T Consensus 53 ~~~~~~l~~~~~D~V~i~-------tp~~----~h~~~~~~al~~gk~v~~---------EKP~~~~~~~~~~l~~~a~~ 112 (331)
T 4hkt_A 53 RTIDAIEAAADIDAVVIC-------TPTD----THADLIERFARAGKAIFC---------EKPIDLDAERVRACLKVVSD 112 (331)
T ss_dssp CCHHHHHHCTTCCEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCCCEEEEe-------CCch----hHHHHHHHHHHcCCcEEE---------ecCCCCCHHHHHHHHHHHHH
Confidence 57889988 58999996 2322 234566678889999997 555 6677777776665443
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 97 QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 97 g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
. ...+.-+-. .--+| .++.+++++.+
T Consensus 113 ~-g~~~~v~~~-~r~~p--~~~~~~~~i~~ 138 (331)
T 4hkt_A 113 T-KAKLMVGFN-RRFDP--HFMAVRKAIDD 138 (331)
T ss_dssp T-TCCEEECCG-GGGCH--HHHHHHHHHHT
T ss_pred c-CCeEEEccc-ccCCH--HHHHHHHHHHc
Confidence 2 122222211 11224 56666666554
No 319
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=27.31 E-value=93 Score=27.95 Aligned_cols=84 Identities=14% Similarity=0.211 Sum_probs=54.1
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++|+++- .|+|+|+ .|. .....++.+|-++||+|++ +.| ..|.+|...+..+..
T Consensus 85 y~d~~~ll~~~~vD~V~I~-------tp~----~~H~~~~~~al~aGkhVl~---------EKP~a~~~~ea~~l~~~a~ 144 (412)
T 4gqa_A 85 YGDWRELVNDPQVDVVDIT-------SPN----HLHYTMAMAAIAAGKHVYC---------EKPLAVNEQQAQEMAQAAR 144 (412)
T ss_dssp ESSHHHHHHCTTCCEEEEC-------SCG----GGHHHHHHHHHHTTCEEEE---------ESCSCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEC-------CCc----HHHHHHHHHHHHcCCCeEe---------ecCCcCCHHHHHHHHHHHH
Confidence 3578999975 8999996 332 2356788889999999998 555 678888877777654
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
. ...++.-+.... -+| +++.+++++.+
T Consensus 145 ~-~g~~~~v~~~~R-~~p--~~~~~k~~i~~ 171 (412)
T 4gqa_A 145 R-AGVKTMVAFNNI-KTP--AALLAKQIIAR 171 (412)
T ss_dssp H-HTCCEEEECGGG-TSH--HHHHHHHHHHH
T ss_pred H-hCCeeeecccee-cCH--HHHHHHHHHhc
Confidence 3 222222222211 223 66777777665
No 320
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=27.26 E-value=37 Score=29.32 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=27.6
Q ss_pred cCCcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCC
Q 024709 168 LKASALFVYTKTGQMASLLSR----SRPDCPIFAFAPM 201 (264)
Q Consensus 168 l~A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~ 201 (264)
..++++++.|.+|+||-.+|- .-|..+.+.+||-
T Consensus 147 ~~~DGlivsTptGSTaY~~SaGGpiv~P~~~~~~ltpi 184 (272)
T 2i2c_A 147 FRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEM 184 (272)
T ss_dssp EEESEEEEECTGGGGTHHHHTTCCCCCTTSCEEEEEEE
T ss_pred EECCEEEEEccccHHHHHHcCCCCeeCCCCCceEEeCC
Confidence 357999999999999998884 4577888888863
No 321
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=27.23 E-value=2.4e+02 Score=22.63 Aligned_cols=65 Identities=17% Similarity=0.204 Sum_probs=39.1
Q ss_pred hcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHh
Q 024709 20 KNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSELVRQ 96 (264)
Q Consensus 20 ~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~ 96 (264)
+.+++.++. +|.|.++-.++. -|.+.+ .++++.+++. |+++++-. .|.. +...+...
T Consensus 79 ~~i~~~~~~Gad~v~l~~~~~~--~p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~---e~~~~~~~ 138 (223)
T 1y0e_A 79 KEVDELIESQCEVIALDATLQQ--RPKETL----DELVSYIRTHAPNVEIMADI-----------ATVE---EAKNAARL 138 (223)
T ss_dssp HHHHHHHHHTCSEEEEECSCSC--CSSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHH---HHHHHHHT
T ss_pred HHHHHHHhCCCCEEEEeeeccc--CcccCH----HHHHHHHHHhCCCceEEecC-----------CCHH---HHHHHHHc
Confidence 345555555 787777643321 111222 5678888887 88887621 2333 34567889
Q ss_pred cccccccc
Q 024709 97 QADALMLS 104 (264)
Q Consensus 97 g~d~~~ls 104 (264)
|+|.++.+
T Consensus 139 G~d~i~~~ 146 (223)
T 1y0e_A 139 GFDYIGTT 146 (223)
T ss_dssp TCSEEECT
T ss_pred CCCEEEeC
Confidence 99999875
No 322
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=27.23 E-value=1.2e+02 Score=26.12 Aligned_cols=43 Identities=23% Similarity=0.257 Sum_probs=29.6
Q ss_pred HHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEh
Q 024709 22 LNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVAS 70 (264)
Q Consensus 22 ~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~at 70 (264)
+++.++-.|||++..| . +.+... -...+++.+.+.+||+.--.
T Consensus 61 ~~~~~~~~dgiil~GG-~----~~~~~~-~~~~~i~~~~~~~~PilGIC 103 (273)
T 2w7t_A 61 ARKALLGCDGIFVPGG-F----GNRGVD-GKCAAAQVARMNNIPYFGVX 103 (273)
T ss_dssp HHHHHHTCSEEEECCC-C----TTTTHH-HHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHhhCCEEEecCC-C----CCcCch-hHHHHHHHHHHCCCcEEEEC
Confidence 5456667999999887 2 223333 34567888889999987543
No 323
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=27.13 E-value=2.1e+02 Score=24.95 Aligned_cols=60 Identities=10% Similarity=0.085 Sum_probs=38.7
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHhhcCCCCcEEEEcCChhhhhh-------cccccccEEEEecCCCC
Q 024709 164 IANKLKASALFVYTKTGQMASLLSRSRPDCPIFAFAPMSSVRRR-------LNLQWGLVPFCLNFSDD 224 (264)
Q Consensus 164 lA~~l~A~aIVv~T~sG~tA~~iSr~RP~~PIiAvT~~~~~aR~-------L~L~~GV~P~~~~~~~~ 224 (264)
.-.+.+|.+|++--..-..++.+++-= ++|+|.+-.-..+=-| |.++.|-.|-+.+...+
T Consensus 169 a~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igIGag~~~dgQvLV~~D~lG~~~~~~pkf~k~y~~ 235 (264)
T 1m3u_A 169 ALEAAGAQLLVLECVPVELAKRITEAL-AIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLA 235 (264)
T ss_dssp HHHHHTCCEEEEESCCHHHHHHHHHHC-SSCEEEESSCTTSSEEEECHHHHTTCSCSSCCTTCCCSST
T ss_pred HHHHCCCcEEEEecCCHHHHHHHHHhC-CCCEEEeCCCCCCCcceeeHHhhcCCCCCCCCCcchhhhh
Confidence 445568999888766556777777654 4899998776665444 34555555644443333
No 324
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=27.08 E-value=1.8e+02 Score=21.18 Aligned_cols=60 Identities=5% Similarity=0.089 Sum_probs=37.3
Q ss_pred HHHHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhhhc-ccccc-cEEEEecCC
Q 024709 163 KIANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRRRL-NLQWG-LVPFCLNFS 222 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~L-~L~~G-V~P~~~~~~ 222 (264)
....+.+.+.|++-.. +|. ..+.+.+..|.+|||++|......... .+..| +.-++.++.
T Consensus 52 ~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~ 118 (153)
T 3hv2_A 52 QLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPW 118 (153)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSC
T ss_pred HHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCC
Confidence 3445567787776543 333 345566667999999999876543322 35566 777776643
No 325
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=27.04 E-value=87 Score=27.35 Aligned_cols=54 Identities=19% Similarity=0.178 Sum_probs=39.6
Q ss_pred hcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHH
Q 024709 20 KNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSEL 93 (264)
Q Consensus 20 ~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~ 93 (264)
.+++++++- .|+|+|+ .|. .....++.+|-++||+|++ +.| ..|.+|...+...
T Consensus 65 ~d~~~ll~~~~iDaV~I~-------tP~----~~H~~~~~~al~aGkhVl~---------EKPla~t~~ea~~l~~~ 121 (390)
T 4h3v_A 65 TDWRTLLERDDVQLVDVC-------TPG----DSHAEIAIAALEAGKHVLC---------EKPLANTVAEAEAMAAA 121 (390)
T ss_dssp SCHHHHTTCTTCSEEEEC-------SCG----GGHHHHHHHHHHTTCEEEE---------ESSSCSSHHHHHHHHHH
T ss_pred CCHHHHhcCCCCCEEEEe-------CCh----HHHHHHHHHHHHcCCCcee---------ecCcccchhHHHHHHHH
Confidence 568888875 8999996 232 3456788899999999998 555 6677777666443
No 326
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=27.00 E-value=1e+02 Score=26.46 Aligned_cols=76 Identities=14% Similarity=0.252 Sum_probs=46.9
Q ss_pred EeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHH
Q 024709 11 AKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVAD 89 (264)
Q Consensus 11 akIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~d 89 (264)
-|+++++.. ++...+. +|.|-+. .|-+ +. -.+.++.++++|+-++++. +-..|-..
T Consensus 93 Lmv~~p~~~--i~~~~~aGAd~itvH-----~Ea~-~~----~~~~i~~ir~~G~k~Gval-------np~Tp~e~---- 149 (246)
T 3inp_A 93 LMVKPVDAL--IESFAKAGATSIVFH-----PEAS-EH----IDRSLQLIKSFGIQAGLAL-------NPATGIDC---- 149 (246)
T ss_dssp EECSSCHHH--HHHHHHHTCSEEEEC-----GGGC-SC----HHHHHHHHHTTTSEEEEEE-------CTTCCSGG----
T ss_pred EeeCCHHHH--HHHHHHcCCCEEEEc-----cccc-hh----HHHHHHHHHHcCCeEEEEe-------cCCCCHHH----
Confidence 467887653 6666676 8998885 1222 22 3678888899999999974 22233321
Q ss_pred HHHHHHhccccccc-cccccCC
Q 024709 90 VSELVRQQADALML-SGESAMG 110 (264)
Q Consensus 90 v~~~v~~g~d~~~l-s~eta~G 110 (264)
...+.++.|.|++ |-+...|
T Consensus 150 -l~~~l~~vD~VlvMsV~PGfg 170 (246)
T 3inp_A 150 -LKYVESNIDRVLIMSVNPGFG 170 (246)
T ss_dssp -GTTTGGGCSEEEEECSCTTC-
T ss_pred -HHHHHhcCCEEEEeeecCCCC
Confidence 2345667898866 4344443
No 327
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=26.98 E-value=1.9e+02 Score=25.69 Aligned_cols=79 Identities=14% Similarity=0.236 Sum_probs=44.3
Q ss_pred ceEEEeccCHHHHhcHHHHHhh-cceeee-cCCCcccCCCC-----------CChHHHHHHHHHHHHHhCCCEEEEhhhh
Q 024709 7 IAVIAKIESIDSLKNLNEIILA-SDGAMV-ARGDLGAQVPL-----------EQVPSIQEKIVQLCRQLNKPVIVASQLL 73 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~-~Dgi~i-~rgdL~~~~~~-----------~~v~~~qk~ii~~~~~~gkpv~~atq~l 73 (264)
+.++.++-|.+-. ....+. +|+|.+ +++ .|...+. ......-+++. ...++||+.+..+-
T Consensus 146 ~~v~~~v~t~~~a---~~a~~~GaD~i~v~g~~-~GGh~g~~~~~~~~~~~~~~~~~~l~~i~---~~~~iPViaaGGI~ 218 (369)
T 3bw2_A 146 TLTLVTATTPEEA---RAVEAAGADAVIAQGVE-AGGHQGTHRDSSEDDGAGIGLLSLLAQVR---EAVDIPVVAAGGIM 218 (369)
T ss_dssp CEEEEEESSHHHH---HHHHHTTCSEEEEECTT-CSEECCCSSCCGGGTTCCCCHHHHHHHHH---HHCSSCEEEESSCC
T ss_pred CeEEEECCCHHHH---HHHHHcCCCEEEEeCCC-cCCcCCCcccccccccccccHHHHHHHHH---HhcCceEEEECCCC
Confidence 5677777665432 223333 899999 542 2222111 11122223332 23589999876432
Q ss_pred hhhhhCCCCChHHHHHHHHHHHhcccccccc
Q 024709 74 ESMIEYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 74 eSM~~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
+. .|+..++..|+|+|+++
T Consensus 219 ---------~~---~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 219 ---------RG---GQIAAVLAAGADAAQLG 237 (369)
T ss_dssp ---------SH---HHHHHHHHTTCSEEEES
T ss_pred ---------CH---HHHHHHHHcCCCEEEEC
Confidence 22 45678888999999986
No 328
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=26.90 E-value=33 Score=30.64 Aligned_cols=33 Identities=12% Similarity=0.266 Sum_probs=25.2
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCChh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMSS 203 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~~ 203 (264)
-+.+|++|.||.|...+. |-+ .++++++|++..
T Consensus 91 ~dl~i~iS~SG~T~e~~~a~~~ak~~-g~~~i~IT~~~~ 128 (334)
T 3hba_A 91 GGLVIVISQSGRSPDILAQARMAKNA-GAFCVALVNDET 128 (334)
T ss_dssp TCEEEEEESSSCCHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHc-CCcEEEEeCCCC
Confidence 358999999999876553 444 699999998643
No 329
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=26.79 E-value=1.2e+02 Score=26.37 Aligned_cols=84 Identities=14% Similarity=0.205 Sum_probs=51.1
Q ss_pred HhcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++ -+|.|+|+- |.. ....++..|-++||+|++ ..| ..+.+|...+..+..
T Consensus 54 ~~~~~~~l~~~~~D~V~i~t-------p~~----~h~~~~~~al~~gk~v~~---------EKP~~~~~~~~~~l~~~a~ 113 (344)
T 3euw_A 54 VASPDEVFARDDIDGIVIGS-------PTS----THVDLITRAVERGIPALC---------EKPIDLDIEMVRACKEKIG 113 (344)
T ss_dssp ESSHHHHTTCSCCCEEEECS-------CGG----GHHHHHHHHHHTTCCEEE---------CSCSCSCHHHHHHHHHHHG
T ss_pred eCCHHHHhcCCCCCEEEEeC-------Cch----hhHHHHHHHHHcCCcEEE---------ECCCCCCHHHHHHHHHHHH
Confidence 357888888 589999962 322 234566778899999997 555 667777777766554
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.- ...+.-+-. .--+| .++.+++++.+
T Consensus 114 ~~-g~~~~v~~~-~r~~p--~~~~~k~~i~~ 140 (344)
T 3euw_A 114 DG-ASKVMLGFN-RRFDP--SFAAINARVAN 140 (344)
T ss_dssp GG-GGGEEECCG-GGGCH--HHHHHHHHHHT
T ss_pred hc-CCeEEecch-hhcCH--HHHHHHHHHhc
Confidence 32 222222221 11124 56666666554
No 330
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=26.70 E-value=2.7e+02 Score=24.34 Aligned_cols=135 Identities=14% Similarity=0.086 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCC-Ch--HH----HHHHHHHHHhccccccccccccCCCChHHHHHHHHHH
Q 024709 51 IQEKIVQLCRQLNKPVIVASQLLESMIEYPIP-TR--AE----VADVSELVRQQADALMLSGESAMGQFPDKALAVLRSV 123 (264)
Q Consensus 51 ~qk~ii~~~~~~gkpv~~atq~leSM~~~~~p-tr--ae----~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i 123 (264)
.=.-+...|++.|.++.+-. -. ..| .. .+ ..-+...-..|++.+...++... ..+.++.+...++
T Consensus 80 ~g~alA~~a~~~G~~~~iv~------p~-~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l 151 (341)
T 1f2d_A 80 QTRMVAALAAKLGKKCVLIQ------ED-WVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDI-GMRKSFANALQEL 151 (341)
T ss_dssp HHHHHHHHHHHHTCEEEEEE------EC-CSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCceEEEe------cc-CCCccccccccccccccHHHHHhCCCEEEEeCCccch-hHHHHHHHHHHHH
Confidence 33456778999999988731 11 112 00 11 12335566789998776643211 1122344444443
Q ss_pred HHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHh----hcCCCCc
Q 024709 124 SLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKL-----KASALFVYTKTGQMASLLS----RSRPDCP 194 (264)
Q Consensus 124 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l-----~A~aIVv~T~sG~tA~~iS----r~RP~~P 194 (264)
..+-... | +...+.+.. +..+ ......+.++.+++ +.+.||+..-+|.|+--++ ..+|...
T Consensus 152 ~~~~~~~------~--~i~~~~~~n-p~~~-~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~ 221 (341)
T 1f2d_A 152 EDAGHKP------Y--PIPAGCSEH-KYGG-LGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDD 221 (341)
T ss_dssp HHTTCCE------E--EECGGGTTS-TTTT-THHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGG
T ss_pred HhcCCcE------E--EeCCCcCCC-CccH-HHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCce
Confidence 2221100 1 011110111 1111 23344556666665 4699999999999877665 4568999
Q ss_pred EEEEcCChh
Q 024709 195 IFAFAPMSS 203 (264)
Q Consensus 195 IiAvT~~~~ 203 (264)
|+++-+...
T Consensus 222 vigVe~~~~ 230 (341)
T 1f2d_A 222 VIAIDASFT 230 (341)
T ss_dssp EEEEECSSC
T ss_pred EEEEEecCc
Confidence 999988643
No 331
>2v4x_A JSRV capsid, capsid protein P27; virion, zinc-finger, metal-binding, CAPS protein, structural protein, viral nucleoprotein; HET: MSE; 1.5A {Jaagsiekte sheep retrovirus}
Probab=26.67 E-value=32 Score=27.41 Aligned_cols=67 Identities=10% Similarity=0.063 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHH
Q 024709 49 PSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRS 122 (264)
Q Consensus 49 ~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~ 122 (264)
+...|++-+.|+.+|--.=..-++|||.-... -|..+..-++.+++-|.|.+.=..| -.+.++.+.+
T Consensus 16 ~K~IkeLk~Av~~YGp~APyT~a~le~La~~~-LtP~DW~~lara~Ls~gqyllWkse------~~d~~q~~a~ 82 (140)
T 2v4x_A 16 FKQLKELKIACSQYGPTAPFTIAMIENLGTQA-LPPNDWKQTARACLSGGDYLLWKSE------FFEQCARIAD 82 (140)
T ss_dssp HHHHHHHHHHHHHTCTTSHHHHHHHHHHHTSC-CCHHHHHHHHHHHSCHHHHHHHHHH------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCchHHHHHHHHHhCC-CChHHHHHHHHHHcCcchhHHHHHH------HHHHHHHHHH
Confidence 46779999999999988888889999998875 6778888999999999999887766 3455555544
No 332
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=26.67 E-value=78 Score=27.84 Aligned_cols=84 Identities=15% Similarity=0.189 Sum_probs=52.2
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- .|.|+|+- |.. ....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 54 ~~~~~~ll~~~~~D~V~i~t-------p~~----~h~~~~~~al~aGk~Vl~---------EKP~a~~~~e~~~l~~~a~ 113 (349)
T 3i23_A 54 TADLNELLTDPEIELITICT-------PAH----THYDLAKQAILAGKSVIV---------EKPFCDTLEHAEELFALGQ 113 (349)
T ss_dssp ESCTHHHHSCTTCCEEEECS-------CGG----GHHHHHHHHHHTTCEEEE---------CSCSCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEeC-------CcH----HHHHHHHHHHHcCCEEEE---------ECCCcCCHHHHHHHHHHHH
Confidence 3578899886 89999962 321 235667788999999997 556 667888777776654
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.. ...+.-+-. .--.| .++.+++++.+
T Consensus 114 ~~-g~~~~v~~~-~r~~p--~~~~~~~~i~~ 140 (349)
T 3i23_A 114 EK-GVVVMPYQN-RRFDG--DYLAMKQVVEQ 140 (349)
T ss_dssp HT-TCCEEECCG-GGGCH--HHHHHHHHHHH
T ss_pred Hc-CCeEEEEec-ccCCH--HHHHHHHHHhc
Confidence 42 122221111 11224 56777776654
No 333
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=26.62 E-value=1.2e+02 Score=26.37 Aligned_cols=65 Identities=14% Similarity=0.260 Sum_probs=38.7
Q ss_pred HHhcH-HHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHH
Q 024709 18 SLKNL-NEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVR 95 (264)
Q Consensus 18 ~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~ 95 (264)
|++++ ++..+. +||+++. || |.++ ..+..+.|+++|...+.- -.|..+.. .+.....
T Consensus 113 g~~~f~~~~~~aGvdGvIip--Dl----p~ee----~~~~~~~~~~~gl~~I~l--------vap~t~~e---ri~~i~~ 171 (271)
T 3nav_A 113 GIDDFYQRCQKAGVDSVLIA--DV----PTNE----SQPFVAAAEKFGIQPIFI--------APPTASDE---TLRAVAQ 171 (271)
T ss_dssp CHHHHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEEEE--------ECTTCCHH---HHHHHHH
T ss_pred hHHHHHHHHHHCCCCEEEEC--CC----CHHH----HHHHHHHHHHcCCeEEEE--------ECCCCCHH---HHHHHHH
Confidence 56665 444444 9999993 55 4444 567889999999875531 12333332 2344445
Q ss_pred hccccccc
Q 024709 96 QQADALML 103 (264)
Q Consensus 96 ~g~d~~~l 103 (264)
.+.+++.+
T Consensus 172 ~~~gfiY~ 179 (271)
T 3nav_A 172 LGKGYTYL 179 (271)
T ss_dssp HCCSCEEE
T ss_pred HCCCeEEE
Confidence 56666665
No 334
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=26.56 E-value=1.5e+02 Score=24.00 Aligned_cols=191 Identities=15% Similarity=0.103 Sum_probs=88.3
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccc
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADA 100 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~ 100 (264)
++.+.+. +|++.+. |+.... +........+-+.++..+.|+++...+ -+. .++..+...|+|+
T Consensus 39 a~~~~~~G~d~i~v~--~~~~~~--~~~~~~~~~i~~i~~~~~ipvi~~g~i---------~~~---~~~~~~~~~Gad~ 102 (253)
T 1h5y_A 39 AVRYEEEGADEIAIL--DITAAP--EGRATFIDSVKRVAEAVSIPVLVGGGV---------RSL---EDATTLFRAGADK 102 (253)
T ss_dssp HHHHHHTTCSCEEEE--ECCCCT--TTHHHHHHHHHHHHHHCSSCEEEESSC---------CSH---HHHHHHHHHTCSE
T ss_pred HHHHHHcCCCEEEEE--eCCccc--cCCcccHHHHHHHHHhcCCCEEEECCC---------CCH---HHHHHHHHcCCCE
Confidence 3344444 8988886 222221 233333334444455668999985421 111 2446677789999
Q ss_pred ccccccccCCCChHHHHHHHHHHHHHHHhh-hhcc-cccc-----cCCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcEE
Q 024709 101 LMLSGESAMGQFPDKALAVLRSVSLRIEKW-CREG-KQHA-----TFEPPPISSSVSAGIPGEICNGAAKIANKLKASAL 173 (264)
Q Consensus 101 ~~ls~eta~G~yP~eav~~m~~i~~~~E~~-~~~~-~~~~-----~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~aI 173 (264)
+++..+.. ..| ..+.++++..... .... .... ....+. .......+. ...+..+.+.+++.|
T Consensus 103 V~i~~~~~--~~~----~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~---~~~~~~~~~--~e~~~~~~~~G~d~i 171 (253)
T 1h5y_A 103 VSVNTAAV--RNP----QLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKG---GREATGLDA--VKWAKEVEELGAGEI 171 (253)
T ss_dssp EEESHHHH--HCT----HHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETT---TTEEEEEEH--HHHHHHHHHHTCSEE
T ss_pred EEEChHHh--hCc----HHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeC---CeecCCCCH--HHHHHHHHhCCCCEE
Confidence 99985532 122 2333333332110 0000 0000 000000 000000011 122345566789988
Q ss_pred EEEcCC------ch---HHHHHhhcCCCCcEEEEc--CChhhhhhcccccccEEEEecCC-CCHHHHHHHHHHHHHHcCC
Q 024709 174 FVYTKT------GQ---MASLLSRSRPDCPIFAFA--PMSSVRRRLNLQWGLVPFCLNFS-DDMESNLNQTFSLLKARGL 241 (264)
Q Consensus 174 Vv~T~s------G~---tA~~iSr~RP~~PIiAvT--~~~~~aR~L~L~~GV~P~~~~~~-~~~e~~i~~al~~~~~~g~ 241 (264)
++.+.+ |. ..+.+.+. .+.||++-. .+..-++++. ..|+--+.+... ......+....+++.++|+
T Consensus 172 ~~~~~~~~g~~~~~~~~~i~~l~~~-~~~pvia~GGi~~~~~~~~~~-~~Ga~~v~vgsal~~~~~~~~~~~~~l~~~g~ 249 (253)
T 1h5y_A 172 LLTSIDRDGTGLGYDVELIRRVADS-VRIPVIASGGAGRVEHFYEAA-AAGADAVLAASLFHFRVLSIAQVKRYLKERGV 249 (253)
T ss_dssp EEEETTTTTTCSCCCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHH-HTTCSEEEESHHHHTTSSCHHHHHHHHHHTTC
T ss_pred EEecccCCCCcCcCCHHHHHHHHHh-cCCCEEEeCCCCCHHHHHHHH-HcCCcHHHHHHHHHcCCCCHHHHHHHHHHcCC
Confidence 876543 21 23444444 378999855 2323333332 357777665421 0001114556677888886
No 335
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=26.48 E-value=77 Score=28.87 Aligned_cols=88 Identities=14% Similarity=0.203 Sum_probs=60.3
Q ss_pred eeecCCCccc----CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH-HHHhcccccccccc
Q 024709 32 AMVARGDLGA----QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGE 106 (264)
Q Consensus 32 i~i~rgdL~~----~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~e 106 (264)
++++-.|+-. ....+++......+++.++.+|..|.+... ...+-+...+-+++. +...|+|.+.|. +
T Consensus 106 if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~l~-D 178 (370)
T 3rmj_A 106 TFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTINIP-D 178 (370)
T ss_dssp EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEEEE-C
T ss_pred EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEEec-C
Confidence 4666566532 334466777778899999999999876432 112222333445555 567899999997 9
Q ss_pred ccCCCChHHHHHHHHHHHHH
Q 024709 107 SAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 107 ta~G~yP~eav~~m~~i~~~ 126 (264)
|.=+..|.+.-+.+..+..+
T Consensus 179 T~G~~~P~~~~~lv~~l~~~ 198 (370)
T 3rmj_A 179 TVGYSIPYKTEEFFRELIAK 198 (370)
T ss_dssp SSSCCCHHHHHHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHHHHHh
Confidence 99999999888888777654
No 336
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=26.43 E-value=86 Score=27.19 Aligned_cols=41 Identities=22% Similarity=0.318 Sum_probs=28.1
Q ss_pred HHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 23 NEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 23 ~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
++.++-+|.+++. |.+..+.+ .....++++.|++.|+|+++
T Consensus 141 ~~~~~~~~~v~~~-g~~~~~~~----~~~~~~~~~~a~~~g~~v~~ 181 (331)
T 2ajr_A 141 KMTLSKVDCVVIS-GSIPPGVN----EGICNELVRLARERGVFVFV 181 (331)
T ss_dssp HHHHTTCSEEEEE-SCCCTTSC----TTHHHHHHHHHHHTTCEEEE
T ss_pred HHhcccCCEEEEE-CCCCCCCC----HHHHHHHHHHHHHcCCEEEE
Confidence 4456668988886 33322222 25567888999999999987
No 337
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=26.42 E-value=1.2e+02 Score=26.62 Aligned_cols=100 Identities=16% Similarity=0.211 Sum_probs=57.5
Q ss_pred HHHhcH-HHHHhh-cceeeecCCCcccCCC---CCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHH-HHH
Q 024709 17 DSLKNL-NEIILA-SDGAMVARGDLGAQVP---LEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEV-ADV 90 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~rgdL~~~~~---~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~-~dv 90 (264)
++++++ +-.++. +||+++. | -+.|.+ .++-..+.+.+++.++ -..||++-+ ...+-.|. .-.
T Consensus 25 ~~l~~lv~~li~~Gv~gl~v~-G-ttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la 92 (300)
T 3eb2_A 25 DVMGRLCDDLIQAGVHGLTPL-G-STGEFAYLGTAQREAVVRATIEAAQ-RRVPVVAGV---------ASTSVADAVAQA 92 (300)
T ss_dssp HHHHHHHHHHHHTTCSCBBTT-S-GGGTGGGCCHHHHHHHHHHHHHHHT-TSSCBEEEE---------EESSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEC-c-cccCccccCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CCCCHHHHHHHH
Confidence 444443 445555 8999875 2 222333 2333333344444432 236888754 23334444 344
Q ss_pred HHHHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 91 SELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 91 ~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
..|-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 93 ~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (300)
T 3eb2_A 93 KLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVE 130 (300)
T ss_dssp HHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCC
Confidence 45667899999997665555556777788888876654
No 338
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=26.33 E-value=1.2e+02 Score=26.49 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=50.3
Q ss_pred HhcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++ -+|.|+|+ .|.. .-..++..|-++||+|++ ..| ..+.+|...+..+..
T Consensus 53 ~~~~~~ll~~~~~D~V~i~-------tp~~----~h~~~~~~al~~gk~v~~---------EKP~~~~~~e~~~l~~~a~ 112 (344)
T 3ezy_A 53 YKDPHELIEDPNVDAVLVC-------SSTN----THSELVIACAKAKKHVFC---------EKPLSLNLADVDRMIEETK 112 (344)
T ss_dssp ESSHHHHHHCTTCCEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------ESCSCSCHHHHHHHHHHHH
T ss_pred eCCHHHHhcCCCCCEEEEc-------CCCc----chHHHHHHHHhcCCeEEE---------ECCCCCCHHHHHHHHHHHH
Confidence 357888888 58999996 3322 234556678889999997 555 677777777666544
Q ss_pred h-ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 Q-QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~-g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
. |. .+.-+.. .--+| .++.+++++.+
T Consensus 113 ~~g~--~~~v~~~-~R~~p--~~~~~k~~i~~ 139 (344)
T 3ezy_A 113 KADV--ILFTGFN-RRFDR--NFKKLKEAVEN 139 (344)
T ss_dssp HHTC--CEEEECG-GGGCH--HHHHHHHHHHT
T ss_pred HhCC--cEEEeec-ccCCH--HHHHHHHHHHc
Confidence 3 32 2222121 11223 56666666543
No 339
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=26.32 E-value=2.4e+02 Score=24.48 Aligned_cols=91 Identities=13% Similarity=0.193 Sum_probs=54.1
Q ss_pred ceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHH
Q 024709 7 IAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAE 86 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae 86 (264)
+.+++-+-.++.++-+++ ++|.+-||-+++ .. ..+++.+-+.||||++.|.| ..|..|
T Consensus 103 l~~~te~~d~~~~~~l~~---~vd~~kIgs~~~------~n-----~~ll~~~a~~~kPV~lk~G~--------~~t~~e 160 (276)
T 1vs1_A 103 LPVVTEVLDPRHVETVSR---YADMLQIGARNM------QN-----FPLLREVGRSGKPVLLKRGF--------GNTVEE 160 (276)
T ss_dssp CCEEEECCCGGGHHHHHH---HCSEEEECGGGT------TC-----HHHHHHHHHHTCCEEEECCT--------TCCHHH
T ss_pred CcEEEecCCHHHHHHHHH---hCCeEEECcccc------cC-----HHHHHHHHccCCeEEEcCCC--------CCCHHH
Confidence 445555555555555554 479999987766 22 33455666889999995532 247788
Q ss_pred HHHHHHHHH-hcccccccc--ccccCCCChHHHHHH
Q 024709 87 VADVSELVR-QQADALMLS--GESAMGQFPDKALAV 119 (264)
Q Consensus 87 ~~dv~~~v~-~g~d~~~ls--~eta~G~yP~eav~~ 119 (264)
+....+++. .|.+-++|- +=+..-.||.+.+.+
T Consensus 161 i~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl 196 (276)
T 1vs1_A 161 LLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDV 196 (276)
T ss_dssp HHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBH
T ss_pred HHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCH
Confidence 877777654 466444443 222332456554443
No 340
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=26.29 E-value=80 Score=27.92 Aligned_cols=84 Identities=18% Similarity=0.188 Sum_probs=52.0
Q ss_pred HhcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++ -.|.|+|+- |... -..++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 54 ~~~~~~ll~~~~vD~V~i~t-------p~~~----H~~~~~~al~aGkhVl~---------EKPla~~~~e~~~l~~~a~ 113 (358)
T 3gdo_A 54 VHELEEITNDPAIELVIVTT-------PSGL----HYEHTMACIQAGKHVVM---------EKPMTATAEEGETLKRAAD 113 (358)
T ss_dssp ESSTHHHHTCTTCCEEEECS-------CTTT----HHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHHH
T ss_pred ECCHHHHhcCCCCCEEEEcC-------CcHH----HHHHHHHHHHcCCeEEE---------ecCCcCCHHHHHHHHHHHH
Confidence 357789988 489999962 3222 35667789999999997 666 677888777766554
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.. ...+.-+-. .--+| +++.+++++.+
T Consensus 114 ~~-g~~~~v~~~-~r~~p--~~~~~k~~i~~ 140 (358)
T 3gdo_A 114 EK-GVLLSVYHN-RRWDN--DFLTIKKLISE 140 (358)
T ss_dssp HH-TCCEEEECG-GGGSH--HHHHHHHHHHT
T ss_pred Hc-CCeEEEeee-cccCH--HHHHHHHHHhc
Confidence 42 222221111 11134 56677776653
No 341
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=26.05 E-value=1.2e+02 Score=25.97 Aligned_cols=58 Identities=22% Similarity=0.305 Sum_probs=39.2
Q ss_pred cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccc
Q 024709 29 SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 29 ~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
.|.|++.= |=+......+. ..+..+...|++++| .-+.++. .|+..++..|+|+||+.
T Consensus 38 ~D~vilDl-----Ehav~~~~k~~-~~l~a~~~~~~~~~V---------RVn~~~~---~di~~~ld~G~~gI~lP 95 (261)
T 3qz6_A 38 LDYFIVDC-----EHAAYTFREIN-HLVSVAKNAGVSVLV---------RIPQVDR---AHVQRLLDIGAEGFMIP 95 (261)
T ss_dssp CSEEEEES-----SSSCCCHHHHH-HHHHHHHHHTCEEEE---------ECSSCCH---HHHHHHHHHTCCEEEET
T ss_pred cCEEEEec-----cCCCCCHHHHH-HHHHHHhhcCCeEEE---------EeCCCCH---HHHHHHHhcCCCEEEEC
Confidence 89999953 33333333333 345666778888887 3233333 48999999999999996
No 342
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=25.98 E-value=1.2e+02 Score=24.97 Aligned_cols=89 Identities=17% Similarity=0.153 Sum_probs=50.9
Q ss_pred hcHHHHHhhcceee---ecCCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHH
Q 024709 20 KNLNEIILASDGAM---VARGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSELV 94 (264)
Q Consensus 20 ~n~~eI~~~~Dgi~---i~rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~~v 94 (264)
+.+.++...+|.|+ +.+|--|..+. +....-.+++-+.+.+. +.|+++... -.|..+ ..++
T Consensus 132 e~~~~~~~~~d~vl~~~~~pg~~g~~~~-~~~~~~i~~l~~~~~~~~~~~pi~v~GG--------I~~~n~-----~~~~ 197 (230)
T 1rpx_A 132 TAIEYVLDAVDLVLIMSVNPGFGGQSFI-ESQVKKISDLRKICAERGLNPWIEVDGG--------VGPKNA-----YKVI 197 (230)
T ss_dssp GGGTTTTTTCSEEEEESSCTTCSSCCCC-TTHHHHHHHHHHHHHHHTCCCEEEEESS--------CCTTTH-----HHHH
T ss_pred HHHHHHHhhCCEEEEEEEcCCCCCcccc-HHHHHHHHHHHHHHHhcCCCceEEEECC--------CCHHHH-----HHHH
Confidence 34445555678663 23443333333 23333334444444333 577776432 234333 5566
Q ss_pred HhccccccccccccCCCChHHHHHHHHH
Q 024709 95 RQQADALMLSGESAMGQFPDKALAVLRS 122 (264)
Q Consensus 95 ~~g~d~~~ls~eta~G~yP~eav~~m~~ 122 (264)
..|+|++..++---....|.++++.+.+
T Consensus 198 ~aGad~vvvgSaI~~a~dp~~a~~~l~~ 225 (230)
T 1rpx_A 198 EAGANALVAGSAVFGAPDYAEAIKGIKT 225 (230)
T ss_dssp HHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred HcCCCEEEEChhhhCCCCHHHHHHHHHH
Confidence 7799999998776666789888887753
No 343
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=25.90 E-value=34 Score=31.00 Aligned_cols=49 Identities=16% Similarity=0.146 Sum_probs=31.8
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhh-hhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQL-LESM 76 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~-leSM 76 (264)
++.+++. .+||.+.---.| .+| ......++++.+.|+||+.+||. .+-.
T Consensus 238 l~~~~~~g~~GiVle~~G~G-n~p-----~~~~~~l~~a~~~Gi~VV~~Sr~~~~G~ 288 (337)
T 4pga_A 238 YKALAQNGAKALIHAGTGNG-SVS-----SRVVPALQQLRKNGTQIIRSSHVNQGGF 288 (337)
T ss_dssp HHHHHHTTCSEEEEEEBTTT-BCC-----TTTHHHHHHHHHTTCEEEEEESCCSBCC
T ss_pred HHHHHhcCCCEEEEEEeCCC-CCC-----HHHHHHHHHHHHCCCEEEEeccCCCCCc
Confidence 4555655 899998622221 233 23345666777899999999998 6544
No 344
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=25.88 E-value=78 Score=27.04 Aligned_cols=70 Identities=14% Similarity=0.088 Sum_probs=45.6
Q ss_pred HhcHHHHHhh-cceeeecCCCcc-----cCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH
Q 024709 19 LKNLNEIILA-SDGAMVARGDLG-----AQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE 92 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgdL~-----~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~ 92 (264)
++.+++.++. ++.|.+=--+.. -.++..++...-+++.+.|+++|.|+++- ++. |+
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liIn-------------d~~---~l-- 107 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVN-------------DRA---DI-- 107 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEE-------------SCH---HH--
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEe-------------CHH---HH--
Confidence 3444555555 677766444421 12444566666789999999999999982 122 22
Q ss_pred HHHhcccccccccc
Q 024709 93 LVRQQADALMLSGE 106 (264)
Q Consensus 93 ~v~~g~d~~~ls~e 106 (264)
|...|+|+|-|..+
T Consensus 108 A~~~gAdGVHLg~~ 121 (243)
T 3o63_A 108 ARAAGADVLHLGQR 121 (243)
T ss_dssp HHHHTCSEEEECTT
T ss_pred HHHhCCCEEEecCC
Confidence 55689999999855
No 345
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=25.87 E-value=2.9e+02 Score=22.96 Aligned_cols=74 Identities=5% Similarity=-0.001 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEec--CCCC-
Q 024709 157 ICNGAAKIANKLKASALFVYTKT---------GQMASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLN--FSDD- 224 (264)
Q Consensus 157 IA~aAv~lA~~l~A~aIVv~T~s---------G~tA~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~--~~~~- 224 (264)
.+....+.+...+++.||+-++. |+++..+.+.- +||++.+-+.... ....++++ .+..
T Consensus 77 ~~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~-~~PVlvv~~~~~~--------~~~~Ilva~D~s~~~ 147 (290)
T 3mt0_A 77 LHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFA-PCPVLMTKTARPW--------TGGKILAAVDVGNND 147 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHC-SSCEEEECCCSCS--------TTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcC-CCCEEEecCCCCC--------CCCeEEEEECCCCcc
Confidence 34455667788899988887652 56777777654 4999999754321 23344443 3443
Q ss_pred ------HHHHHHHHHHHHHHc
Q 024709 225 ------MESNLNQTFSLLKAR 239 (264)
Q Consensus 225 ------~e~~i~~al~~~~~~ 239 (264)
.+..+..+...++..
T Consensus 148 ~~~~~~s~~al~~a~~la~~~ 168 (290)
T 3mt0_A 148 GEHRSLHAGIISHAYDIAGLA 168 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHHHHHHHc
Confidence 456677777777764
No 346
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=25.86 E-value=54 Score=27.82 Aligned_cols=43 Identities=12% Similarity=0.150 Sum_probs=30.5
Q ss_pred HHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEh
Q 024709 18 SLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVAS 70 (264)
Q Consensus 18 ~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~at 70 (264)
-.+.++.++.- .|||++.+.|- ......++++++.|.|+++..
T Consensus 48 ~~~~i~~~~~~~vdgiIi~~~~~----------~~~~~~~~~~~~~giPvV~~~ 91 (330)
T 3uug_A 48 QLSQIENMVTKGVKVLVIASIDG----------TTLSDVLKQAGEQGIKVIAYD 91 (330)
T ss_dssp HHHHHHHHHHHTCSEEEECCSSG----------GGGHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHcCCCEEEEEcCCc----------hhHHHHHHHHHHCCCCEEEEC
Confidence 34566776666 99999986551 123456778899999999854
No 347
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=25.75 E-value=1.9e+02 Score=20.99 Aligned_cols=61 Identities=8% Similarity=0.044 Sum_probs=37.6
Q ss_pred HHHHHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCC
Q 024709 162 AKIANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFS 222 (264)
Q Consensus 162 v~lA~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~ 222 (264)
.....+...+.|++-.. +|. ..+.+.+..|.+||+++|....... .-.+..|+.-++..+.
T Consensus 44 ~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~ 110 (153)
T 3cz5_A 44 YRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSS 110 (153)
T ss_dssp HHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTS
T ss_pred HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEecCC
Confidence 34445556787766432 333 3556666679999999997654322 2245678887776543
No 348
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=25.63 E-value=1.7e+02 Score=25.71 Aligned_cols=76 Identities=11% Similarity=0.138 Sum_probs=43.0
Q ss_pred hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHH-hcccccccccc
Q 024709 28 ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVR-QQADALMLSGE 106 (264)
Q Consensus 28 ~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~-~g~d~~~ls~e 106 (264)
.+|.+-||-+++ ...+ +++.+-+.||||++.|-|- -|..|+.+.+..+. .|.+-++|---
T Consensus 108 ~vd~~kIgA~~~------~n~~-----Ll~~~a~~~kPV~lk~G~~--------~t~~ei~~Av~~i~~~Gn~~i~L~~r 168 (292)
T 1o60_A 108 VVDIIQLPAFLA------RQTD-----LVEAMAKTGAVINVKKPQF--------LSPSQMGNIVEKIEECGNDKIILCDR 168 (292)
T ss_dssp TCSEEEECGGGT------TCHH-----HHHHHHHTTCEEEEECCTT--------SCGGGHHHHHHHHHHTTCCCEEEEEC
T ss_pred cCCEEEECcccc------cCHH-----HHHHHHcCCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 467777765554 2222 6666668999999966442 24557766666554 57654554322
Q ss_pred ccCCCChH-----HHHHHHHH
Q 024709 107 SAMGQFPD-----KALAVLRS 122 (264)
Q Consensus 107 ta~G~yP~-----eav~~m~~ 122 (264)
+..-.|+- .++..|++
T Consensus 169 g~~~~y~~~~~dl~~i~~lk~ 189 (292)
T 1o60_A 169 GTNFGYDNLIVDMLGFSVMKK 189 (292)
T ss_dssp CEECSTTCEECCTTHHHHHHH
T ss_pred CCCCCCCccccCHHHHHHHHh
Confidence 22225542 45555543
No 349
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=25.60 E-value=2.4e+02 Score=25.55 Aligned_cols=65 Identities=12% Similarity=0.193 Sum_probs=40.2
Q ss_pred HHHhcHHHHHhh-cceeee--cCCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHH
Q 024709 17 DSLKNLNEIILA-SDGAMV--ARGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVS 91 (264)
Q Consensus 17 ~~~~n~~eI~~~-~Dgi~i--~rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~ 91 (264)
+..+.++.+++. +|.|.| +.|+ +..+...++.+++. +.|++..+ ..|..+ ..
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~----------~~~~~~~I~~ik~~~p~v~Vi~G~----------v~t~e~---A~ 164 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGH----------SEGVLQRIRETRAAYPHLEIIGGN----------VATAEG---AR 164 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTT----------SHHHHHHHHHHHHHCTTCEEEEEE----------ECSHHH---HH
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCC----------CHHHHHHHHHHHHhcCCCceEeee----------eCCHHH---HH
Confidence 345667777777 888887 3221 12344456666665 67877532 233333 34
Q ss_pred HHHHhcccccccc
Q 024709 92 ELVRQQADALMLS 104 (264)
Q Consensus 92 ~~v~~g~d~~~ls 104 (264)
.+...|+|++.++
T Consensus 165 ~a~~aGAD~I~vG 177 (366)
T 4fo4_A 165 ALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHTCSEEEEC
T ss_pred HHHHcCCCEEEEe
Confidence 6777899999984
No 350
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=25.57 E-value=70 Score=26.99 Aligned_cols=69 Identities=20% Similarity=0.138 Sum_probs=42.7
Q ss_pred CChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHHHHHH
Q 024709 46 EQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAVLRSV 123 (264)
Q Consensus 46 ~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~m~~i 123 (264)
+.+..-.+.+.+.|+..+.|||+-|- .+|..|+...+. +...|+|+|=-|.-=..|.--++.|+.|++.
T Consensus 103 ~~v~~ei~~v~~a~~~~~lkvIlet~---------~l~~e~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~ 172 (220)
T 1ub3_A 103 DYLEAEVRAVREAVPQAVLKVILETG---------YFSPEEIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRV 172 (220)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEECCGG---------GSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCceEEEecC---------CCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHh
Confidence 34555556667777666677787553 346667655555 6678999986652111122345899999875
No 351
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=25.53 E-value=30 Score=31.37 Aligned_cols=34 Identities=15% Similarity=0.083 Sum_probs=26.3
Q ss_pred cCCcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCCh
Q 024709 168 LKASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMS 202 (264)
Q Consensus 168 l~A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~ 202 (264)
..-+.+|++|.||.|...+ +|-+ .++++++|++.
T Consensus 96 ~~~dlvI~iS~SGeT~e~l~a~~~ak~~-Ga~~IaIT~~~ 134 (366)
T 3knz_A 96 SGKALVVGISQGGGSLSTLAAMERARNV-GHITASMAGVA 134 (366)
T ss_dssp SCSEEEEEEESSSCCHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHc-CCCEEEEECCC
Confidence 3457899999999987655 3444 69999999754
No 352
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=25.41 E-value=33 Score=30.89 Aligned_cols=31 Identities=10% Similarity=0.123 Sum_probs=23.5
Q ss_pred cEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCCh
Q 024709 171 SALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 171 ~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~ 202 (264)
+.+|++|.||.|...+. |-+ .++++++|++.
T Consensus 99 dlvI~iS~SG~T~e~l~a~~~Ak~~-Ga~~iaIT~~~ 134 (367)
T 2poc_A 99 DTCVFVSQSGETADSILALQYCLER-GALTVGIVNSV 134 (367)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHT-TCEEEEEESST
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 58899999999866553 444 68999999864
No 353
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=25.36 E-value=36 Score=30.65 Aligned_cols=50 Identities=8% Similarity=0.062 Sum_probs=32.8
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHH-HhCCCEEEEhhhhhhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCR-QLNKPVIVASQLLESMI 77 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~-~~gkpv~~atq~leSM~ 77 (264)
++.+++. .+||.+. -+|.-.+|......++++. +.|+||+.+||..+-.+
T Consensus 232 l~~~~~~g~~GiVle------~~G~Gn~p~~~~~~l~~a~~~~gi~VV~~Sr~~~G~v 283 (331)
T 1agx_A 232 YQAFAKAGVKAIIHA------GTGNGSMANYLVPEVRKLHDEQGLQIVRSSRVAQGFV 283 (331)
T ss_dssp HHHHHTTTCSEEEEE------EBTTTBCCTTHHHHHHHHHHTTCCEEEEEESSCSSCB
T ss_pred HHHHHhCCCCEEEEe------eECCCCCCHHHHHHHHHHHHcCCCEEEEECCCCCCCc
Confidence 5556654 8999996 2232222234455566666 88999999999775544
No 354
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=25.34 E-value=1e+02 Score=27.15 Aligned_cols=78 Identities=12% Similarity=0.105 Sum_probs=46.6
Q ss_pred HHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEE----EEhhh---hhhhhhCCCCChHH-
Q 024709 16 IDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVI----VASQL---LESMIEYPIPTRAE- 86 (264)
Q Consensus 16 ~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~----~atq~---leSM~~~~~ptrae- 86 (264)
.++++|...+++. ++||-+-=|+ .+...|+++.++|.||. +.-|= +.......+..+++
T Consensus 95 ~~a~~na~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~ 162 (275)
T 1o66_A 95 EQAFAAAAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA 162 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHH
T ss_pred HHHHHHHHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHH
Confidence 4678888888887 8888886441 34556677788999986 11111 11111112222333
Q ss_pred -HHHHHHHHHhccccccccc
Q 024709 87 -VADVSELVRQQADALMLSG 105 (264)
Q Consensus 87 -~~dv~~~v~~g~d~~~ls~ 105 (264)
+.|..-....|+|+++|-+
T Consensus 163 ~i~rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 163 LLNDAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp HHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHHHcCCcEEEEec
Confidence 4677778889999999953
No 355
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=25.27 E-value=1.9e+02 Score=25.10 Aligned_cols=44 Identities=16% Similarity=0.170 Sum_probs=33.0
Q ss_pred HHHHHHHHHhc-----CCcEEEEEcCCchHHHHHhh----c-CCCCcEEEEcCCh
Q 024709 158 CNGAAKIANKL-----KASALFVYTKTGQMASLLSR----S-RPDCPIFAFAPMS 202 (264)
Q Consensus 158 A~aAv~lA~~l-----~A~aIVv~T~sG~tA~~iSr----~-RP~~PIiAvT~~~ 202 (264)
...+.++.+++ +.+.||+.+-+|.|+--+++ . .|. .|+++.+..
T Consensus 173 ~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~ 226 (338)
T 1tzj_A 173 VGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASA 226 (338)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSS
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccC
Confidence 34455666555 46899999999999877664 3 688 999999854
No 356
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=25.23 E-value=13 Score=28.13 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=30.5
Q ss_pred cHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 21 NLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 21 n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
.+++.+.-.|.|++| |.|....+++-+.|..+|+||.+
T Consensus 46 ~~~~~~~~~DvvLLg----------PQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 46 AHYDIMGVYDLIILA----------PQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp SCTTTGGGCSEEEEC----------GGGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHhhccCCCEEEEC----------hHHHHHHHHHHHHhhhcCCcEEE
Confidence 455556667888887 67777788888899999999997
No 357
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=25.15 E-value=47 Score=31.22 Aligned_cols=50 Identities=16% Similarity=0.248 Sum_probs=34.0
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
++.+++. .+||.+. -+|.-.+|......++++.+.|+||+.+||...-.+
T Consensus 318 l~a~~~~g~~GiVle------g~G~Gn~p~~~~~~l~~a~~~Gi~VV~~Sqc~~G~V 368 (435)
T 2d6f_A 318 IKWHLDEGYRGIVIE------GTGLGHCPDTLIPVIGEAHDMGVPVAMTSQCLNGRV 368 (435)
T ss_dssp HHHHHHTTCSEEEEE------EBTTTBCCGGGHHHHHHHHHTTCCEEEEETTCBSCC
T ss_pred HHHHHhCCCCEEEEe------cCCCCCcCHHHHHHHHHHHhCCCEEEEeCCCCCCcc
Confidence 4556655 8999996 333333334444556777889999999999875443
No 358
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=25.14 E-value=1.6e+02 Score=26.82 Aligned_cols=98 Identities=14% Similarity=0.067 Sum_probs=49.3
Q ss_pred HHHhcH-HHHHhh-cceeeec-CCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHH-HHHHH
Q 024709 17 DSLKNL-NEIILA-SDGAMVA-RGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEV-ADVSE 92 (264)
Q Consensus 17 ~~~~n~-~eI~~~-~Dgi~i~-rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~-~dv~~ 92 (264)
++++++ +-.++. +||+++. ---=+..+..++=..+.+..++.++ -..||++-+ ...+-.|. .-...
T Consensus 80 ~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGv---------g~~st~eai~la~~ 149 (360)
T 4dpp_A 80 EAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-GSIKVIGNT---------GSNSTREAIHATEQ 149 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC-CCCeEEEec---------CCCCHHHHHHHHHH
Confidence 455444 444455 9999994 1111122222333333333333332 235888754 34444554 34445
Q ss_pred HHHhccccccccccccCCCChHHHHHHHHHHH
Q 024709 93 LVRQQADALMLSGESAMGQFPDKALAVLRSVS 124 (264)
Q Consensus 93 ~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~ 124 (264)
|-..|+|++|+..=--...-+-+.++..+.|+
T Consensus 150 A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA 181 (360)
T 4dpp_A 150 GFAVGMHAALHINPYYGKTSIEGLIAHFQSVL 181 (360)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHHHHTTG
T ss_pred HHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHH
Confidence 77789999999754322222334445555544
No 359
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=25.04 E-value=1.6e+02 Score=26.25 Aligned_cols=77 Identities=9% Similarity=0.070 Sum_probs=47.6
Q ss_pred ceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHH
Q 024709 7 IAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAE 86 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae 86 (264)
+.+++-+-+++.++ .+.+.+|.+-||-+++ ...+ +++++-+.||||++.|-|- -|..|
T Consensus 113 Lpv~Tev~D~~~v~---~l~~~vd~lkIgA~~~------~n~~-----LLr~va~~gkPVilK~Gms--------~t~~e 170 (298)
T 3fs2_A 113 FPVLTDIHTEEQCA---AVAPVVDVLQIPAFLC------RQTD-----LLIAAARTGRVVNVKKGQF--------LAPWD 170 (298)
T ss_dssp CCEEEECCSHHHHH---HHTTTCSEEEECGGGT------TCHH-----HHHHHHHTTSEEEEECCTT--------CCGGG
T ss_pred CeEEEEeCCHHHHH---HHHhhCCEEEECcccc------CCHH-----HHHHHHccCCcEEEeCCCC--------CCHHH
Confidence 34455455554444 3444588888886655 3444 4555668899999966431 35667
Q ss_pred HHHHHHHHH-hccccccccc
Q 024709 87 VADVSELVR-QQADALMLSG 105 (264)
Q Consensus 87 ~~dv~~~v~-~g~d~~~ls~ 105 (264)
+...+..+. .|.+=++|..
T Consensus 171 i~~ave~i~~~Gn~~iiL~e 190 (298)
T 3fs2_A 171 MKNVLAKITESGNPNVLATE 190 (298)
T ss_dssp HHHHHHHHHTTTCCCEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 766666554 4777777753
No 360
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=25.00 E-value=30 Score=30.87 Aligned_cols=31 Identities=16% Similarity=0.382 Sum_probs=23.7
Q ss_pred cEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCCh
Q 024709 171 SALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 171 ~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~ 202 (264)
+.+|++|.||.|...+. |-+ .++++++|++.
T Consensus 102 dlvI~iS~SG~T~e~l~a~~~ak~~-Ga~vIaIT~~~ 137 (342)
T 1j5x_A 102 GLAFLFSRTGNTTEVLLANDVLKKR-NHRTIGITIEE 137 (342)
T ss_dssp EEEEEECSSSCCHHHHHHHHHHHHT-TEEEEEEESCT
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 58899999999876553 433 68999999865
No 361
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=24.94 E-value=1e+02 Score=28.17 Aligned_cols=84 Identities=15% Similarity=0.162 Sum_probs=44.9
Q ss_pred cceEEEeccCHHHHhcHHHHHhh-cceeeec-CCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA-SDGAMVA-RGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT 83 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~-rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt 83 (264)
...|+.|.= ...+......+. +|+|.|. +|-=....+.+.+ ....++.+... ...|||....+-
T Consensus 252 ~~PvivKgv--~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~-~~l~~v~~av~-~~ipVia~GGI~---------- 317 (392)
T 2nzl_A 252 SLPIVAKGI--LRGDDAREAVKHGLNGILVSNHGARQLDGVPATI-DVLPEIVEAVE-GKVEVFLDGGVR---------- 317 (392)
T ss_dssp CSCEEEEEE--CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHH-HHHHHHHHHHT-TSSEEEECSSCC----------
T ss_pred CCCEEEEec--CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChH-HHHHHHHHHcC-CCCEEEEECCCC----------
Confidence 456777721 123333444444 9999993 1110012232222 22233333221 248888744222
Q ss_pred hHHHHHHHHHHHhccccccccc
Q 024709 84 RAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 84 rae~~dv~~~v~~g~d~~~ls~ 105 (264)
--.|+..++..|+|+|++..
T Consensus 318 --~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 318 --KGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp --SHHHHHHHHHTTCSEEEECH
T ss_pred --CHHHHHHHHHhCCCeeEECH
Confidence 23688999999999999975
No 362
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=24.93 E-value=96 Score=22.32 Aligned_cols=46 Identities=11% Similarity=-0.027 Sum_probs=29.5
Q ss_pred HHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHH
Q 024709 183 ASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNL 229 (264)
Q Consensus 183 A~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i 229 (264)
.+.+.+..|.+||+.+|....... .-.+..|+.-++.++ -+.++..
T Consensus 71 ~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP-~~~~~l~ 117 (136)
T 3kto_A 71 LETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFIEKP-FIEHVLV 117 (136)
T ss_dssp HHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEEESS-BCHHHHH
T ss_pred HHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHheeCC-CCHHHHH
Confidence 445556669999999998665422 224567888887764 3444443
No 363
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=24.93 E-value=37 Score=31.15 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=28.5
Q ss_pred CCcEEEEEcCCchHHHHH-----hhcC-CCCcEEEEcCChh--hhhhc
Q 024709 169 KASALFVYTKTGQMASLL-----SRSR-PDCPIFAFAPMSS--VRRRL 208 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~i-----Sr~R-P~~PIiAvT~~~~--~aR~L 208 (264)
.-+.+|++|.||.|+..+ +|-+ +.++++++|++.. ++|..
T Consensus 109 ~~dl~i~iS~SG~T~e~~~al~~ak~~~~g~~~i~IT~~~~s~la~~a 156 (389)
T 3i0z_A 109 VATVLVSFARSGNSPESLATVDLAKSLVDELYQVTITCAADGKLALQA 156 (389)
T ss_dssp SEEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHTS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHc
Confidence 346899999999987754 3444 5799999998653 44433
No 364
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=24.84 E-value=1e+02 Score=27.18 Aligned_cols=83 Identities=13% Similarity=0.214 Sum_probs=51.2
Q ss_pred hcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHHh
Q 024709 20 KNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVRQ 96 (264)
Q Consensus 20 ~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~~ 96 (264)
.+++|+++- +|.|+|+ .|... ...++.+|-++||+|++ +.| ..+.+|...+..+...
T Consensus 79 ~~~~~ll~~~~~D~V~i~-------tp~~~----h~~~~~~al~aGk~Vl~---------EKP~a~~~~ea~~l~~~a~~ 138 (350)
T 3rc1_A 79 EGYPALLERDDVDAVYVP-------LPAVL----HAEWIDRALRAGKHVLA---------EKPLTTDRPQAERLFAVARE 138 (350)
T ss_dssp ESHHHHHTCTTCSEEEEC-------CCGGG----HHHHHHHHHHTTCEEEE---------ESSSCSSHHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCCCEEEEC-------CCcHH----HHHHHHHHHHCCCcEEE---------eCCCCCCHHHHHHHHHHHHH
Confidence 567888874 8999996 33222 34566788899999997 555 6688888777776544
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 97 QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 97 g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
. ...+.-+- ..--+| .++.+++++.+
T Consensus 139 ~-g~~~~v~~-~~R~~p--~~~~~k~~i~~ 164 (350)
T 3rc1_A 139 R-GLLLMENF-MFLHHP--QHRQVADMLDE 164 (350)
T ss_dssp T-TCCEEEEC-GGGGCT--HHHHHHHHHHT
T ss_pred h-CCEEEEEe-cccCCH--HHHHHHHHHhc
Confidence 3 22222111 111224 56667776653
No 365
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=24.78 E-value=35 Score=30.85 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=23.9
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCCh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~ 202 (264)
-+.+|++|.||.|...+. |-+ .++++++|++.
T Consensus 108 ~dlvI~iS~SG~T~e~l~a~~~Ak~~-Ga~~iaIT~~~ 144 (375)
T 2zj3_A 108 DDVCFFLSQSGETADTLMGLRYCKER-GALTVGITNTV 144 (375)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHT-TCEEEEEESCT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHc-CCcEEEEECCC
Confidence 358899999999876553 444 68999999865
No 366
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=24.74 E-value=1.1e+02 Score=26.46 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=52.2
Q ss_pred HhcHHHHH----------hhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHH
Q 024709 19 LKNLNEII----------LASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEV 87 (264)
Q Consensus 19 ~~n~~eI~----------~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~ 87 (264)
..++++++ .-.|.|+|+ .|. .....++.+|-++||+|++ +.| ..+.+|.
T Consensus 53 ~~~~~~ll~~~~~l~~~~~~vD~V~I~-------tP~----~~H~~~~~~al~aGkhVl~---------EKPla~~~~ea 112 (312)
T 3o9z_A 53 FTEPEAFEAYLEDLRDRGEGVDYLSIA-------SPN----HLHYPQIRMALRLGANALS---------EKPLVLWPEEI 112 (312)
T ss_dssp ESCHHHHHHHHHHHHHTTCCCSEEEEC-------SCG----GGHHHHHHHHHHTTCEEEE---------CSSSCSCHHHH
T ss_pred eCCHHHHHHHhhhhcccCCCCcEEEEC-------CCc----hhhHHHHHHHHHCCCeEEE---------ECCCCCCHHHH
Confidence 34566766 238999995 332 2357788899999999997 556 6788888
Q ss_pred HHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 88 ADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 88 ~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
..+..+...- ...+..+.... -+| +++.+++++.+
T Consensus 113 ~~l~~~a~~~-g~~~~v~~~~R-~~p--~~~~~k~~i~~ 147 (312)
T 3o9z_A 113 ARLKELEART-GRRVYTVLQLR-VHP--SLLALKERLGQ 147 (312)
T ss_dssp HHHHHHHHHH-CCCEEECCGGG-GCH--HHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCEEEEEeehh-cCH--HHHHHHHHHHc
Confidence 7776655432 22333333222 234 66677776654
No 367
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=24.70 E-value=2e+02 Score=20.75 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=35.0
Q ss_pred HHHHHhcCCcEEEEEc----CCch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCC
Q 024709 162 AKIANKLKASALFVYT----KTGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFS 222 (264)
Q Consensus 162 v~lA~~l~A~aIVv~T----~sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~ 222 (264)
.....+...+.|++-. .+|. ..+.+.+..|..||+.+|....... .-.+-.|+.-++.++.
T Consensus 42 l~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~ 108 (141)
T 3cu5_A 42 IQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPI 108 (141)
T ss_dssp HHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCC
Confidence 3444555677666543 2443 3556666679999999998765322 2245678888776543
No 368
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.69 E-value=85 Score=24.50 Aligned_cols=52 Identities=15% Similarity=0.010 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCchH----HHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecC
Q 024709 169 KASALFVYTKTGQM----ASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNF 221 (264)
Q Consensus 169 ~A~aIVv~T~sG~t----A~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~ 221 (264)
+++.+|+.|.+... ...+.+..|...|++.+.+....+.|.- .|+..+..+.
T Consensus 105 ~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~-~G~~~vi~p~ 160 (183)
T 3c85_A 105 HVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIAEYPDQLEGLLE-SGVDAAFNIY 160 (183)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHH-HTCSEEEEHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-cCCCEEEchH
Confidence 57777777766543 2344566788999999999888877654 4777666653
No 369
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=24.63 E-value=2.2e+02 Score=23.33 Aligned_cols=86 Identities=12% Similarity=0.043 Sum_probs=47.7
Q ss_pred HhcHHHHHhh-cceeeecCCC-cccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHh
Q 024709 19 LKNLNEIILA-SDGAMVARGD-LGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQ 96 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgd-L~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~ 96 (264)
++.++++.+. +|.|++..-+ =+...+. + ....+++. +..+.|++... ..-+.. |+..+...
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~-~~~~~~l~---~~~~ipvia~G---------GI~~~~---d~~~~~~~ 216 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSGY-D-TEMIRFVR---PLTTLPIIASG---------GAGKME---HFLEAFLA 216 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSCC-C-HHHHHHHG---GGCCSCEEEES---------CCCSHH---HHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCCC-C-HHHHHHHH---HhcCCCEEEEC---------CCCCHH---HHHHHHHc
Confidence 4445666666 7988884211 0111222 2 22233333 34589999844 333333 45555668
Q ss_pred ccccccccccccCCC-ChHHHHHHHH
Q 024709 97 QADALMLSGESAMGQ-FPDKALAVLR 121 (264)
Q Consensus 97 g~d~~~ls~eta~G~-yP~eav~~m~ 121 (264)
|+|+++...---.+. .|.++++.+.
T Consensus 217 Gadgv~vGsal~~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 217 GADAALAASVFHFREIDVRELKEYLK 242 (253)
T ss_dssp TCSEEEESHHHHTTCSCHHHHHHHHH
T ss_pred CChHHHHHHHHHcCCCCHHHHHHHHH
Confidence 999999875555555 5666666553
No 370
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=24.54 E-value=53 Score=27.38 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=42.0
Q ss_pred HHHhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHH
Q 024709 17 DSLKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELV 94 (264)
Q Consensus 17 ~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v 94 (264)
.++++.-+.++. -|.+=+=|| -+|.+.+++ +++.+.|+|... + .- ...||.+|+
T Consensus 114 ~al~~~~~~i~~~~PD~iEiLPG---------i~p~iI~~i---~~~~~~PiIaGG-l--------I~---~~edv~~al 169 (192)
T 3kts_A 114 SAYNKGVALIQKVQPDCIELLPG---------IIPEQVQKM---TQKLHIPVIAGG-L--------IE---TSEQVNQVI 169 (192)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECT---------TCHHHHHHH---HHHHCCCEEEES-S--------CC---SHHHHHHHH
T ss_pred chHHHHHHHHhhcCCCEEEECCc---------hhHHHHHHH---HHhcCCCEEEEC-C--------cC---CHHHHHHHH
Confidence 455555555554 577644444 234433333 556899999754 2 22 346889999
Q ss_pred Hhcccccccccc
Q 024709 95 RQQADALMLSGE 106 (264)
Q Consensus 95 ~~g~d~~~ls~e 106 (264)
..|||+|.-|..
T Consensus 170 ~aGA~aVsTs~~ 181 (192)
T 3kts_A 170 ASGAIAVTTSNK 181 (192)
T ss_dssp TTTEEEEEECCG
T ss_pred HcCCeEEEeCCH
Confidence 999999998865
No 371
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=24.50 E-value=3.1e+02 Score=24.05 Aligned_cols=48 Identities=8% Similarity=-0.159 Sum_probs=29.5
Q ss_pred chHHHHHHHHHHHHhcCCcEEEEEc-CCchHHHHHhhc--CCCCcEEEEcC
Q 024709 153 IPGEICNGAAKIANKLKASALFVYT-KTGQMASLLSRS--RPDCPIFAFAP 200 (264)
Q Consensus 153 ~~~aIA~aAv~lA~~l~A~aIVv~T-~sG~tA~~iSr~--RP~~PIiAvT~ 200 (264)
..+.-+...+..|.+.+.+.||.++ .+|++++.+|.+ +-..|.+.+.|
T Consensus 64 ~K~R~~~~~l~~a~~~G~~~vv~~s~tsGN~g~alA~aa~~~G~~~~iv~p 114 (342)
T 4d9b_A 64 NKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLE 114 (342)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEE
T ss_pred hHHHhHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHHHHHHhCCcEEEEEe
Confidence 3444555556667777788888887 688887766531 22344444444
No 372
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=24.40 E-value=1.2e+02 Score=27.14 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=36.9
Q ss_pred HHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccc
Q 024709 23 NEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADAL 101 (264)
Q Consensus 23 ~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~ 101 (264)
+.+++. +|.|.+.-|+. . .++++.+++.|+|++... .|.. +...+...|+|++
T Consensus 116 ~~~~~~g~~~V~~~~g~~-------~-----~~~i~~~~~~g~~v~~~v-----------~t~~---~a~~a~~~GaD~i 169 (369)
T 3bw2_A 116 AVLLDDPVPVVSFHFGVP-------D-----REVIARLRRAGTLTLVTA-----------TTPE---EARAVEAAGADAV 169 (369)
T ss_dssp HHHHHSCCSEEEEESSCC-------C-----HHHHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSEE
T ss_pred HHHHhcCCCEEEEeCCCC-------c-----HHHHHHHHHCCCeEEEEC-----------CCHH---HHHHHHHcCCCEE
Confidence 333344 78887754432 1 456777888899988732 2322 3457778999999
Q ss_pred cccc
Q 024709 102 MLSG 105 (264)
Q Consensus 102 ~ls~ 105 (264)
.+++
T Consensus 170 ~v~g 173 (369)
T 3bw2_A 170 IAQG 173 (369)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9954
No 373
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=24.29 E-value=1.1e+02 Score=26.33 Aligned_cols=77 Identities=6% Similarity=0.054 Sum_probs=48.0
Q ss_pred ceEEEeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChH
Q 024709 7 IAVIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRA 85 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptra 85 (264)
+..+..+.+++.++ ..... .|.+++..-|-. .+...+.. .+..+...|+|++|=+ +..+
T Consensus 20 ~g~~~~~~~p~~~e---~a~~~GaD~v~lDlE~~~-----~~~~~~~~-~~~a~~~~~~~~~VRv---------~~~~-- 79 (267)
T 2vws_A 20 IGLWLSSTTAYMAE---IAATSGYDWLLIDGEHAP-----NTIQDLYH-QLQAVAPYASQPVIRP---------VEGS-- 79 (267)
T ss_dssp EEEEECSCCHHHHH---HHHTTCCSEEEEETTTSC-----CCHHHHHH-HHHHHTTSSSEEEEEC---------SSCC--
T ss_pred EEEEEeCCCHHHHH---HHHhCCCCEEEEcCCCCC-----CCHHHHHH-HHHHHHhCCCcEEEEe---------CCCC--
Confidence 45666676665543 23333 899999887752 22233333 3345556789898822 2222
Q ss_pred HHHHHHHHHHhcccccccc
Q 024709 86 EVADVSELVRQQADALMLS 104 (264)
Q Consensus 86 e~~dv~~~v~~g~d~~~ls 104 (264)
-.|+..++..|+|+||+.
T Consensus 80 -~~~i~~~l~~g~~~I~~P 97 (267)
T 2vws_A 80 -KPLIKQVLDIGAQTLLIP 97 (267)
T ss_dssp -HHHHHHHHHTTCCEEEEC
T ss_pred -HHHHHHHHHhCCCEEEeC
Confidence 357778888899999996
No 374
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=24.25 E-value=2e+02 Score=25.09 Aligned_cols=76 Identities=11% Similarity=0.117 Sum_probs=43.7
Q ss_pred hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHH-hcccccccccc
Q 024709 28 ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVR-QQADALMLSGE 106 (264)
Q Consensus 28 ~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~-~g~d~~~ls~e 106 (264)
++|.+-||-+++ ...+ +++.+-+.||||++.|-|- -|..|+.+.+..+. .|.+-++|---
T Consensus 105 ~~d~~kIga~~~------~n~~-----ll~~~a~~~kPV~lk~G~~--------~t~~e~~~A~~~i~~~Gn~~i~L~~r 165 (280)
T 2qkf_A 105 VCDVIQLPAFLA------RQTD-----LVVAMAKTGNVVNIKKPQF--------LSPSQMKNIVEKFHEAGNGKLILCER 165 (280)
T ss_dssp HCSEEEECGGGT------TBHH-----HHHHHHHTCCEEEEECCTT--------SCGGGHHHHHHHHHHTTCCCEEEEEC
T ss_pred hCCEEEECcccc------cCHH-----HHHHHHcCCCcEEEECCCC--------CCHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 368888875554 3333 5666668899999966442 24557766666554 57654555432
Q ss_pred ccCCCChH-----HHHHHHHH
Q 024709 107 SAMGQFPD-----KALAVLRS 122 (264)
Q Consensus 107 ta~G~yP~-----eav~~m~~ 122 (264)
+..-.|+- .++..|++
T Consensus 166 g~~~~~~~~~~dl~~i~~lk~ 186 (280)
T 2qkf_A 166 GSSFGYDNLVVDMLGFGVMKQ 186 (280)
T ss_dssp CEECSTTCEECCTTHHHHHHH
T ss_pred CCCCCCCccccCHHHHHHHHH
Confidence 22224432 35665554
No 375
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=24.23 E-value=1.3e+02 Score=26.31 Aligned_cols=83 Identities=11% Similarity=0.192 Sum_probs=51.2
Q ss_pred hcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHHh
Q 024709 20 KNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVRQ 96 (264)
Q Consensus 20 ~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~~ 96 (264)
.+++++++ -+|.|+|+ .|.. ....++.+|-++||+|++ +.| ..+.+|...+..+...
T Consensus 65 ~~~~~ll~~~~~D~V~i~-------tp~~----~h~~~~~~al~~gk~v~~---------EKP~a~~~~~~~~l~~~a~~ 124 (354)
T 3q2i_A 65 ASLTDMLAQTDADIVILT-------TPSG----LHPTQSIECSEAGFHVMT---------EKPMATRWEDGLEMVKAADK 124 (354)
T ss_dssp SCHHHHHHHCCCSEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCCCEEEEC-------CCcH----HHHHHHHHHHHCCCCEEE---------eCCCcCCHHHHHHHHHHHHH
Confidence 57889987 48999995 3322 234566778889999997 555 5677777776665544
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 97 QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 97 g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
- ...+.-+.. .--+| .++.+++++.+
T Consensus 125 ~-g~~~~v~~~-~r~~p--~~~~~k~~i~~ 150 (354)
T 3q2i_A 125 A-KKHLFVVKQ-NRRNA--TLQLLKRAMQE 150 (354)
T ss_dssp H-TCCEEECCG-GGGSH--HHHHHHHHHHT
T ss_pred h-CCeEEEEEc-ccCCH--HHHHHHHHHhc
Confidence 2 222222221 12234 66777776654
No 376
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=24.21 E-value=1.5e+02 Score=26.19 Aligned_cols=85 Identities=12% Similarity=0.150 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEcCCch----------HHHHHhhcCCCCcEEEEcCCh---hhhhhcccccccEEEEecC
Q 024709 155 GEICNGAAKIANKLKASALFVYTKTGQ----------MASLLSRSRPDCPIFAFAPMS---SVRRRLNLQWGLVPFCLNF 221 (264)
Q Consensus 155 ~aIA~aAv~lA~~l~A~aIVv~T~sG~----------tA~~iSr~RP~~PIiAvT~~~---~~aR~L~L~~GV~P~~~~~ 221 (264)
-..+.++++.|++.++..|+-++.++. .++.+++ +..+||..-..+- ..+++ .+--|..++.++.
T Consensus 28 ~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~-~~~VPValHlDHg~~~e~i~~-ai~~GFtSVMiDg 105 (286)
T 1gvf_A 28 AETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYST-TYNMPLALHLDHHESLDDIRR-KVHAGVRSAMIDG 105 (286)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHH-HTTSCBEEEEEEECCHHHHHH-HHHTTCCEEEECC
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHH-hCCCcEEEEcCCCCCHHHHHH-HHHcCCCeEEECC
Confidence 458889999999999999999988763 2233344 4569988877544 33332 3556999999986
Q ss_pred C-CCHHHHHH---HHHHHHHHcCC
Q 024709 222 S-DDMESNLN---QTFSLLKARGL 241 (264)
Q Consensus 222 ~-~~~e~~i~---~al~~~~~~g~ 241 (264)
+ .+.|+++. +.++++.+.|.
T Consensus 106 S~lp~eeNi~~Tk~vv~~ah~~gv 129 (286)
T 1gvf_A 106 SHFPFAENVKLVKSVVDFCHSQDC 129 (286)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCC
Confidence 6 45677664 45677777664
No 377
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=24.07 E-value=69 Score=28.38 Aligned_cols=100 Identities=22% Similarity=0.277 Sum_probs=62.8
Q ss_pred cceEEEeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhh---hhhh----
Q 024709 6 NIAVIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLL---ESMI---- 77 (264)
Q Consensus 6 ~~~iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~l---eSM~---- 77 (264)
.+.|.-....-..++.+.+=++. -+-+|+.-. ++|+++-...-|++++.|++.|..|=.==..+ |.-+
T Consensus 80 ~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS----~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~ 155 (288)
T 3q94_A 80 TVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDAS----HHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEG 155 (288)
T ss_dssp CSCEEEEEEEECSHHHHHHHHHHTCSEEEECCT----TSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGG
T ss_pred CCcEEEECCCCCCHHHHHHHHHcCCCeEEEeCC----CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCcc
Confidence 34444444444333434333443 788999644 45888889999999999999998774210000 0000
Q ss_pred -hCCCCChHHHHHHHHHH-HhccccccccccccCCCChH
Q 024709 78 -EYPIPTRAEVADVSELV-RQQADALMLSGESAMGQFPD 114 (264)
Q Consensus 78 -~~~~ptrae~~dv~~~v-~~g~d~~~ls~eta~G~yP~ 114 (264)
....| .|...++ .-|+|++-.+--|+-|.||-
T Consensus 156 ~~yT~P-----eea~~Fv~~TgvD~LAvaiGt~HG~Y~~ 189 (288)
T 3q94_A 156 VIYADP-----AECKHLVEATGIDCLAPALGSVHGPYKG 189 (288)
T ss_dssp CBCCCH-----HHHHHHHHHHCCSEEEECSSCBSSCCSS
T ss_pred ccCCCH-----HHHHHHHHHHCCCEEEEEcCcccCCcCC
Confidence 01222 3445666 58999999999999999973
No 378
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=23.89 E-value=1.8e+02 Score=24.38 Aligned_cols=40 Identities=13% Similarity=0.275 Sum_probs=31.0
Q ss_pred hcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEE
Q 024709 20 KNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVA 69 (264)
Q Consensus 20 ~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~a 69 (264)
+|++++++-.|.|+.+-++ +.....+.+.|++.|+|++.+
T Consensus 113 ~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 113 AELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEe
Confidence 4677888888988887433 346678889999999999975
No 379
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=23.80 E-value=2e+02 Score=20.41 Aligned_cols=64 Identities=6% Similarity=0.043 Sum_probs=37.1
Q ss_pred HHHhcCCcEEEEEcCCch-HHHHHhhcCC-CCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHH
Q 024709 164 IANKLKASALFVYTKTGQ-MASLLSRSRP-DCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESN 228 (264)
Q Consensus 164 lA~~l~A~aIVv~T~sG~-tA~~iSr~RP-~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~ 228 (264)
...+...+.|+....+|. ..+.+.+. | .+||+.+|....... .-.+-.|+.-++.....+.++.
T Consensus 57 ~l~~~~~dlvi~~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l 123 (137)
T 2pln_A 57 LMDIRNYDLVMVSDKNALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKAL 123 (137)
T ss_dssp HHHHSCCSEEEECSTTHHHHHHHHHHH-STTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHH
T ss_pred HHHcCCCCEEEEcCccHHHHHHHHHhc-CCCccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHH
Confidence 334556787772223443 34444445 7 899999998654322 2245678888777644144444
No 380
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=23.78 E-value=79 Score=27.24 Aligned_cols=51 Identities=25% Similarity=0.274 Sum_probs=32.2
Q ss_pred HHhcHHHHHhhcceeeecCCCcccCCCC--CChHHHHH----HHHHHHHHhCCCEEE
Q 024709 18 SLKNLNEIILASDGAMVARGDLGAQVPL--EQVPSIQE----KIVQLCRQLNKPVIV 68 (264)
Q Consensus 18 ~~~n~~eI~~~~Dgi~i~rgdL~~~~~~--~~v~~~qk----~ii~~~~~~gkpv~~ 68 (264)
.++.+++.+...+.-.+|=|+.|++... ..-...|+ ..++.|++.|+|+++
T Consensus 89 ~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~i 145 (301)
T 2xio_A 89 YLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFL 145 (301)
T ss_dssp HHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEE
T ss_pred HHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 4555555555322244555778887643 12245664 556889999999998
No 381
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=23.72 E-value=1.9e+02 Score=20.23 Aligned_cols=68 Identities=10% Similarity=0.096 Sum_probs=38.4
Q ss_pred HHHHHHhcCCcEEEEEc----CCchH-HHHHhhc--CCCCcEEEEcCChhhh-hhcccccccEEEEecCCCCHHHHH
Q 024709 161 AAKIANKLKASALFVYT----KTGQM-ASLLSRS--RPDCPIFAFAPMSSVR-RRLNLQWGLVPFCLNFSDDMESNL 229 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T----~sG~t-A~~iSr~--RP~~PIiAvT~~~~~a-R~L~L~~GV~P~~~~~~~~~e~~i 229 (264)
+.+...+.+.+.|++-- .+|.. .+.+.+. .|..||+++|...... ..-.+..|+.-++.++. +.++..
T Consensus 38 al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~-~~~~L~ 113 (122)
T 3gl9_A 38 ALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPF-SPSQFI 113 (122)
T ss_dssp HHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSC-CHHHHH
T ss_pred HHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCC-CHHHHH
Confidence 34444566778666643 24432 3344322 3789999999754332 22356778888777643 344443
No 382
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=23.71 E-value=64 Score=26.40 Aligned_cols=50 Identities=14% Similarity=0.312 Sum_probs=35.1
Q ss_pred HHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHH------hCCCEEEEh
Q 024709 16 IDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQ------LNKPVIVAS 70 (264)
Q Consensus 16 ~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~------~gkpv~~at 70 (264)
++.++.+-+-+..+|+++++--..- -.++...|..++.+-. .|||+.+.+
T Consensus 61 ~~~~~~~~~~i~~AD~iVi~tP~Y~-----~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~ 116 (199)
T 4hs4_A 61 PAPVLTMAQQIATADAVVIVTPEYN-----YSVPGVLKNAIDWLSRVSPQPLAGKPVALVT 116 (199)
T ss_dssp CHHHHHHHHHHHHSSEEEEEECCBT-----TBCCHHHHHHHHHHTTSSSCTTTTCEEEEEE
T ss_pred CHHHHHHHHHHHhCCEEEEEcCccC-----CCcCHHHHHHHHHhcccCCcccCCCEEEEEE
Confidence 4456667777777999999743333 4555677888887754 789998754
No 383
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=23.69 E-value=1.8e+02 Score=19.94 Aligned_cols=63 Identities=13% Similarity=0.104 Sum_probs=38.0
Q ss_pred HHhcCCcEEEEEc----CCch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHH
Q 024709 165 ANKLKASALFVYT----KTGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESN 228 (264)
Q Consensus 165 A~~l~A~aIVv~T----~sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~ 228 (264)
..+.+.+.|++-- .+|. ..+.+.+..|..||+.+|....... .-.+-.|+.-++.++. +.++.
T Consensus 43 ~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~-~~~~l 111 (120)
T 1tmy_A 43 YKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPF-QPSRV 111 (120)
T ss_dssp HHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSC-CHHHH
T ss_pred HHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcceeEeCCC-CHHHH
Confidence 3444677666543 2443 3556666679999999998655432 2245678888777543 34433
No 384
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=23.68 E-value=1.3e+02 Score=26.16 Aligned_cols=74 Identities=19% Similarity=0.217 Sum_probs=47.3
Q ss_pred cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHHhccccccccccc
Q 024709 29 SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVRQQADALMLSGES 107 (264)
Q Consensus 29 ~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~~g~d~~~ls~et 107 (264)
.|.|+|+ .|. .....++.+|-++||+|++ +.| ..+.+|...+..+...- ...+..+-.
T Consensus 74 vD~V~I~-------tP~----~~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~~~-g~~~~v~~~ 132 (318)
T 3oa2_A 74 LDYVSIC-------SPN----YLHYPHIAAGLRLGCDVIC---------EKPLVPTPEMLDQLAVIERET-DKRLYNILQ 132 (318)
T ss_dssp CCEEEEC-------SCG----GGHHHHHHHHHHTTCEEEE---------CSSCCSCHHHHHHHHHHHHHH-TCCEEECCG
T ss_pred CcEEEEC-------CCc----HHHHHHHHHHHHCCCeEEE---------ECCCcCCHHHHHHHHHHHHHh-CCEEEEEEh
Confidence 8999996 232 2356788899999999997 666 67888877777655442 222223222
Q ss_pred cCCCChHHHHHHHHHHHHH
Q 024709 108 AMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 108 a~G~yP~eav~~m~~i~~~ 126 (264)
.. -+| +++.+++++.+
T Consensus 133 ~R-~~p--~~~~~k~~i~~ 148 (318)
T 3oa2_A 133 LR-HHQ--AIIALKDKVAR 148 (318)
T ss_dssp GG-GCH--HHHHHHHHHHH
T ss_pred hh-cCH--HHHHHHHHHhc
Confidence 21 234 56777776655
No 385
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=23.63 E-value=46 Score=28.70 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=28.3
Q ss_pred cCCcEEEEEcCCchHHHHHhh----cCCCCcEEEEcC
Q 024709 168 LKASALFVYTKTGQMASLLSR----SRPDCPIFAFAP 200 (264)
Q Consensus 168 l~A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~ 200 (264)
..++++++.|.+|+||-.+|- .-|.++++.++|
T Consensus 174 ~~~dglivstptGSTay~~SaGG~iv~P~~~~~~l~p 210 (292)
T 2an1_A 174 QRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVP 210 (292)
T ss_dssp EEESEEEEECTGGGGTHHHHTTCCEECTTCSEEEEEE
T ss_pred EEeCEEEECCCCchHHHHHhCCCCCCCCCCCeEEEEe
Confidence 358999999999999998884 668888888887
No 386
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=23.62 E-value=69 Score=29.81 Aligned_cols=64 Identities=17% Similarity=0.217 Sum_probs=43.2
Q ss_pred cceeeecCCC--ccc-----CCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccc
Q 024709 29 SDGAMVARGD--LGA-----QVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADAL 101 (264)
Q Consensus 29 ~Dgi~i~rgd--L~~-----~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~ 101 (264)
+|+|.++-|. .+. ..+.+ -....+++...|+..+.|+|....+- -..|+..++..|+|++
T Consensus 296 ad~I~vg~g~g~~~~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~GGi~------------~~~di~kal~~GA~~v 362 (491)
T 1zfj_A 296 VDVVKVGIGPGSICTTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIADGGIK------------YSGDIVKALAAGGNAV 362 (491)
T ss_dssp CSEEEECSSCCTTBCHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEE
T ss_pred CCEEEECccCCcceEEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEeeCCCC------------CHHHHHHHHHcCCcce
Confidence 8999887431 000 11222 35556788888888999999855322 2358899999999999
Q ss_pred cccc
Q 024709 102 MLSG 105 (264)
Q Consensus 102 ~ls~ 105 (264)
++..
T Consensus 363 ~vG~ 366 (491)
T 1zfj_A 363 MLGS 366 (491)
T ss_dssp EEST
T ss_pred eeCH
Confidence 9953
No 387
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=23.48 E-value=30 Score=30.43 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=28.0
Q ss_pred cCCcEEEEEcCCchHHHHHhh----cCCCCcEEEEcCCh
Q 024709 168 LKASALFVYTKTGQMASLLSR----SRPDCPIFAFAPMS 202 (264)
Q Consensus 168 l~A~aIVv~T~sG~tA~~iSr----~RP~~PIiAvT~~~ 202 (264)
..++.+++.|.+|+||..+|- ..|.++.+.+||-.
T Consensus 186 ~~~dGlivsTptGSTaY~lSaGGpiv~P~~~~~~l~pi~ 224 (307)
T 1u0t_A 186 FGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNN 224 (307)
T ss_dssp EEESEEEEECTGGGGTHHHHTTCCEECTTCCCEEEEEES
T ss_pred EcCCEEEEccchhhHHHHhcCCCCccCCCCCeEEEEeec
Confidence 468999999999999998885 45777777877633
No 388
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=23.31 E-value=29 Score=31.16 Aligned_cols=87 Identities=15% Similarity=0.283 Sum_probs=58.0
Q ss_pred CcceEEEecc--------CHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhh
Q 024709 5 VNIAVIAKIE--------SIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLES 75 (264)
Q Consensus 5 ~~~~iiakIE--------~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leS 75 (264)
+.+.++.+-| ..+-.+.+++++.. .-+|+++||- +.| +.+++.|+++|.|+..+.
T Consensus 51 ~RVQi~G~~E~~yL~~L~~~~r~~~~~~l~~~~iP~IIvtrg~---~pp--------~elie~A~e~~ipLl~T~----- 114 (312)
T 1knx_A 51 GSVAILGKREFGFLSQKTLVEQQQILHNLLKLNPPAIILTKSF---TDP--------TVLLQVNQTYQVPILKTD----- 114 (312)
T ss_dssp CBCEEECHHHHHHHTTSCHHHHTTTHHHHHTTCCSCEEEETTT---CCC--------HHHHHHGGGTCCCEEEES-----
T ss_pred ceEEEEehHHHHHHHhcCHHHHHHHHHHHhCCCCCEEEEECCC---CCC--------HHHHHHHHHcCCEEEEeC-----
Confidence 4566666444 44555678888876 8899999983 222 578999999999999732
Q ss_pred hhhCCCCChHHHHHHHH---------------HHHhccccccccccccCCCC
Q 024709 76 MIEYPIPTRAEVADVSE---------------LVRQQADALMLSGESAMGQF 112 (264)
Q Consensus 76 M~~~~~ptrae~~dv~~---------------~v~~g~d~~~ls~eta~G~y 112 (264)
.+|-.=++.+.+ +|.-+--+++++|++..||-
T Consensus 115 -----~~t~~~~~~L~~~l~~~la~~~~~H~~~v~~~g~gvli~G~sG~GKS 161 (312)
T 1knx_A 115 -----FFSTELSFTVETYINEQFATVAQIHGVLLEVFGVGVLLTGRSGIGKS 161 (312)
T ss_dssp -----SCGGGGTTTHHHHHHHHTCCCEEEEEEEEEETTEEEEEEESSSSSHH
T ss_pred -----ccHHHHHHHHHHHHHHHhhhcceeEEEEEEECCEEEEEEcCCCCCHH
Confidence 222211222222 33344568999999999994
No 389
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=23.28 E-value=95 Score=27.42 Aligned_cols=101 Identities=16% Similarity=0.261 Sum_probs=59.5
Q ss_pred EEEeccCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhh---hh-hhhhCCC-C
Q 024709 9 VIAKIESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQL---LE-SMIEYPI-P 82 (264)
Q Consensus 9 iiakIE~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~---le-SM~~~~~-p 82 (264)
|.--...-..++.+.+=++. -+.+|+.-. ++|+++-...-|++++.|++.|..|=.==.- .| ....... -
T Consensus 77 ValHlDHg~~~e~i~~ai~~GFtSVMiDgS----~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~ 152 (286)
T 1gvf_A 77 LALHLDHHESLDDIRRKVHAGVRSAMIDGS----HFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESA 152 (286)
T ss_dssp BEEEEEEECCHHHHHHHHHTTCCEEEECCT----TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CC
T ss_pred EEEEcCCCCCHHHHHHHHHcCCCeEEECCC----CCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccc
Confidence 33333333333333333444 688999744 5688899999999999999999887320000 11 1100000 0
Q ss_pred ChHHHHHHHHHH-HhccccccccccccCCCCh
Q 024709 83 TRAEVADVSELV-RQQADALMLSGESAMGQFP 113 (264)
Q Consensus 83 trae~~dv~~~v-~~g~d~~~ls~eta~G~yP 113 (264)
....-.|...++ .-|+|++-.+--|+-|.||
T Consensus 153 ~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~ 184 (286)
T 1gvf_A 153 FLTDPQEAKRFVELTGVDSLAVAIGTAHGLYS 184 (286)
T ss_dssp SSCCHHHHHHHHHHHCCSEEEECSSCCSSCCS
T ss_pred cCCCHHHHHHHHHHHCCCEEEeecCccccCcC
Confidence 011123445666 5899999999999999997
No 390
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=23.23 E-value=5e+02 Score=24.85 Aligned_cols=110 Identities=11% Similarity=0.049 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHH-HHHhccccccccccccCCCChHHHHHHHHHHHHHHH
Q 024709 50 SIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIE 128 (264)
Q Consensus 50 ~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E 128 (264)
.-.+..++.++++|+.+-++= |+...+.=+...+-+++. +...|+|.+.|. +|+=+..|-++-+.+..+..+.-
T Consensus 144 ~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p 218 (539)
T 1rqb_A 144 RNMAHAMAAVKKAGKHAQGTI----CYTISPVHTVEGYVKLAGQLLDMGADSIALK-DMAALLKPQPAYDIIKAIKDTYG 218 (539)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE----ECCCSTTCCHHHHHHHHHHHHHTTCSEEEEE-ETTCCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCeEEEEE----EeeeCCCCCHHHHHHHHHHHHHcCCCEEEeC-CCCCCcCHHHHHHHHHHHHHhcC
Confidence 335788999999999883211 112333335555666666 566799999997 89989999988888877765541
Q ss_pred -hhhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCc
Q 024709 129 -KWCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLKASALFVYTKTG 180 (264)
Q Consensus 129 -~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~aIVv~T~sG 180 (264)
.. .- .++.+. + .-+|.+....|-..+|+ +|=-|-.|
T Consensus 219 ~~i---~I---~~H~Hn-------d--~GlAvAN~laAveAGa~-~VD~ti~g 255 (539)
T 1rqb_A 219 QKT---QI---NLHCHS-------T--TGVTEVSLMKAIEAGVD-VVDTAISS 255 (539)
T ss_dssp TTC---CE---EEEEBC-------T--TSCHHHHHHHHHHTTCS-EEEEBCGG
T ss_pred CCc---eE---EEEeCC-------C--CChHHHHHHHHHHhCCC-EEEEeccc
Confidence 10 00 011111 1 12455566677778887 45555444
No 391
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=23.23 E-value=2.5e+02 Score=25.35 Aligned_cols=75 Identities=17% Similarity=0.261 Sum_probs=48.2
Q ss_pred ceEEEeccCHHHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHH
Q 024709 7 IAVIAKIESIDSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAE 86 (264)
Q Consensus 7 ~~iiakIE~~~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae 86 (264)
+.+++-+-..+.++-+.+ .+|.+-||-+++ .. -.+++++-+.||||++.|-| ..|..|
T Consensus 171 l~~~te~~d~~~~~~l~~---~vd~lkIgAr~~------~n-----~~LL~~va~~~kPVilk~G~--------~~tl~e 228 (350)
T 1vr6_A 171 MYVVTEALGEDDLPKVAE---YADIIQIGARNA------QN-----FRLLSKAGSYNKPVLLKRGF--------MNTIEE 228 (350)
T ss_dssp CEEEEECSSGGGHHHHHH---HCSEEEECGGGT------TC-----HHHHHHHHTTCSCEEEECCT--------TCCHHH
T ss_pred CcEEEEeCCHHHHHHHHH---hCCEEEECcccc------cC-----HHHHHHHHccCCcEEEcCCC--------CCCHHH
Confidence 455665666666555544 479999987665 22 23455556889999995532 247788
Q ss_pred HHHHHHHHH-hccccccc
Q 024709 87 VADVSELVR-QQADALML 103 (264)
Q Consensus 87 ~~dv~~~v~-~g~d~~~l 103 (264)
+...++++. .|.+-++|
T Consensus 229 i~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 229 FLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp HHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHCCCCeEEE
Confidence 877777654 46655555
No 392
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=23.12 E-value=2.2e+02 Score=20.68 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=35.9
Q ss_pred HHHhcC-CcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhhhc-ccccc-cEEEEecCC
Q 024709 164 IANKLK-ASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRRRL-NLQWG-LVPFCLNFS 222 (264)
Q Consensus 164 lA~~l~-A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~L-~L~~G-V~P~~~~~~ 222 (264)
...+.+ .+.|++-.. +|. ..+.+.+..|..||+.+|......... .+..| +.-++.++.
T Consensus 42 ~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~ 108 (151)
T 3kcn_A 42 CIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPC 108 (151)
T ss_dssp HHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEESSC
T ss_pred HHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCC
Confidence 334444 487776432 343 355666677999999999877643322 34456 777766543
No 393
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=23.05 E-value=2.4e+02 Score=24.00 Aligned_cols=68 Identities=7% Similarity=-0.053 Sum_probs=41.5
Q ss_pred HHHHHHHhcCCcEEEEE-----cCCchH-HHHHhhcCCCCcEEEEcCChhhhhhcccccccEEEEecCCCCHHHHHH
Q 024709 160 GAAKIANKLKASALFVY-----TKTGQM-ASLLSRSRPDCPIFAFAPMSSVRRRLNLQWGLVPFCLNFSDDMESNLN 230 (264)
Q Consensus 160 aAv~lA~~l~A~aIVv~-----T~sG~t-A~~iSr~RP~~PIiAvT~~~~~aR~L~L~~GV~P~~~~~~~~~e~~i~ 230 (264)
.|.....+.+.+.|++- -.+|.. ++.+-+. +.+|||++|.+..... -.+.-|..-++.++. +.+++..
T Consensus 196 eAl~~~~~~~~dlvl~D~~MPd~mdG~e~~~~ir~~-~~~piI~lT~~~~~~~-~~~~~G~~~~l~KP~-~~~~L~~ 269 (286)
T 3n0r_A 196 EALEAVTRRTPGLVLADIQLADGSSGIDAVKDILGR-MDVPVIFITAFPERLL-TGERPEPTFLITKPF-QPETVKA 269 (286)
T ss_dssp HHHHHHHHCCCSEEEEESCCTTSCCTTTTTHHHHHH-TTCCEEEEESCGGGGC-CSSSCCCSSEEESSC-CHHHHHH
T ss_pred HHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHhc-CCCCEEEEeCCHHHHH-HHHhCCCcEEEeCCC-CHHHHHH
Confidence 34445556677866664 346653 3344333 3999999999876433 356778888777653 3444444
No 394
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=23.00 E-value=30 Score=29.68 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=28.9
Q ss_pred cCCcEEEEEcCCchHHHHHh----hcCCCCcEEEEcCCh
Q 024709 168 LKASALFVYTKTGQMASLLS----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 168 l~A~aIVv~T~sG~tA~~iS----r~RP~~PIiAvT~~~ 202 (264)
..++++++.|.+|+||-.+| -..|.++.+.+||-.
T Consensus 146 ~~~dGlivsTptGSTaY~~SaGGpiv~P~~~~~~i~pi~ 184 (258)
T 1yt5_A 146 FFADGVVISTPTGSTAYSLSIGGPIIFPECEVLEISPIA 184 (258)
T ss_dssp EEESEEEEECTGGGGTTTTTTTCCCCCTTCCEEEEEEES
T ss_pred EEccEEEEEcCCCcHHHHhhCCCcccCCCCCEEEEEEec
Confidence 35899999999999999887 466888888888654
No 395
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=22.95 E-value=78 Score=27.50 Aligned_cols=62 Identities=13% Similarity=0.293 Sum_probs=38.7
Q ss_pred HHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHH--hcccc
Q 024709 23 NEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVR--QQADA 100 (264)
Q Consensus 23 ~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~--~g~d~ 100 (264)
++.++-+|.+++. |.+..+.+ .....++++.|+++|+|+++ .|.... ....+. ..+|.
T Consensus 142 ~~~~~~~~~v~~~-g~~~~~~~----~~~~~~~~~~a~~~g~~v~~------------D~~~~~---l~~~l~~~~~~di 201 (330)
T 2jg1_A 142 EQMMEKVEAVAIS-GSLPKGLN----QDYYAQIIERCQNKGVPVIL------------DCSGAT---LQTVLENPYKPTV 201 (330)
T ss_dssp HHHGGGCSEEEEE-SCCCBTSC----TTHHHHHHHHHHTTTCCEEE------------ECCHHH---HHHHHTSSSCCSE
T ss_pred HHhcCCCCEEEEE-CCCCCCCC----HHHHHHHHHHHHHCCCEEEE------------ECCcHH---HHHHHhccCCceE
Confidence 3445668988885 43332222 24567889999999999987 444322 223333 27888
Q ss_pred cccc
Q 024709 101 LMLS 104 (264)
Q Consensus 101 ~~ls 104 (264)
+..+
T Consensus 202 l~~N 205 (330)
T 2jg1_A 202 IKPN 205 (330)
T ss_dssp ECCB
T ss_pred EEeC
Confidence 7777
No 396
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=22.93 E-value=3.9e+02 Score=23.50 Aligned_cols=145 Identities=17% Similarity=0.154 Sum_probs=0.0
Q ss_pred CcccCCCCCChHHHHHHHHHHHHHhCCC-EEEEhhhhhhhhhCC-----------------CCChHHHHHHHHHHHhccc
Q 024709 38 DLGAQVPLEQVPSIQEKIVQLCRQLNKP-VIVASQLLESMIEYP-----------------IPTRAEVADVSELVRQQAD 99 (264)
Q Consensus 38 dL~~~~~~~~v~~~qk~ii~~~~~~gkp-v~~atq~leSM~~~~-----------------~ptrae~~dv~~~v~~g~d 99 (264)
|+++ +....-..-.+++++.++++|-- |.+--.++.--.... .|+...+..+..|+.+|+|
T Consensus 63 DhTl-L~p~~T~~dI~~lc~eA~~~g~aaVCV~P~~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAd 141 (288)
T 3oa3_A 63 DHTQ-LSLSATGSQIDVLCAEAKEYGFATVCVRPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGAS 141 (288)
T ss_dssp EEEC-CCTTCCHHHHHHHHHHHHHHTCSEEEECGGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCS
T ss_pred Cccc-CCCCCCHHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCC
Q ss_pred ccc--ccccccCCCChHHHHHHHHHHHHHHHhhhhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcEEEEEc
Q 024709 100 ALM--LSGESAMGQFPDKALAVLRSVSLRIEKWCREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLKASALFVYT 177 (264)
Q Consensus 100 ~~~--ls~eta~G~yP~eav~~m~~i~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~aIVv~T 177 (264)
-|= +.---.....--...+-+..+...+... ...--++.-...+ +.+.. ++++|.+.+|+ +|=|
T Consensus 142 EIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~----------eei~~-A~~ia~eaGAD--fVKT 207 (288)
T 3oa3_A 142 ELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTA----------DEIIA-GCVLSSLAGAD--YVKT 207 (288)
T ss_dssp EEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCH----------HHHHH-HHHHHHHTTCS--EEEC
T ss_pred EEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCH----------HHHHH-HHHHHHHcCCC--EEEc
Q ss_pred CCch--------HHHHHhhc----CCCCcEEE
Q 024709 178 KTGQ--------MASLLSRS----RPDCPIFA 197 (264)
Q Consensus 178 ~sG~--------tA~~iSr~----RP~~PIiA 197 (264)
.||. ..+++.+. .+++||.+
T Consensus 208 STGf~~~GAT~edv~lmr~~v~~~g~~v~VKA 239 (288)
T 3oa3_A 208 STGFNGPGASIENVSLMSAVCDSLQSETRVKA 239 (288)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCceEEE
No 397
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=22.92 E-value=55 Score=29.79 Aligned_cols=50 Identities=8% Similarity=0.100 Sum_probs=32.8
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChH--HHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVP--SIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~--~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
++.+++. .+||++. -+|.-.+| ......++++.+.|+||+.+||...-.+
T Consensus 246 l~a~~~~g~~GiVle------~~G~Gn~p~~~~~~~~l~~a~~~Gi~VV~~Src~~G~v 298 (358)
T 2him_A 246 VRNFLRQPVKALILR------SYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKV 298 (358)
T ss_dssp HHHHTSSSCSEEEEE------EBTTTBCCCCHHHHHHHHHHHHTTCEEEEEESSSBCCC
T ss_pred HHHHHhCCCCEEEEe------cCCCCCCCCcHHHHHHHHHHHHCCCEEEEEcCCCCCCC
Confidence 4555544 8999995 23332333 2344556777889999999999775443
No 398
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=22.83 E-value=2.1e+02 Score=24.81 Aligned_cols=131 Identities=15% Similarity=0.094 Sum_probs=76.1
Q ss_pred HHhCCCEEEEhhhhhhhhhCCCC-----ChHHH----HHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHhh
Q 024709 60 RQLNKPVIVASQLLESMIEYPIP-----TRAEV----ADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLRIEKW 130 (264)
Q Consensus 60 ~~~gkpv~~atq~leSM~~~~~p-----trae~----~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~ 130 (264)
+....||.+ |+. |+. +..|+ .|+..+...|+|++.+..=|..|.--.++.+.+-..+. ..
T Consensus 48 ~~~~ipv~v-------MIR-PR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~---~~ 116 (256)
T 1twd_A 48 QRVTIPVHP-------IIR-PRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG---PL 116 (256)
T ss_dssp HHCCSCEEE-------BCC-SSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT---TS
T ss_pred HHcCCceEE-------EEC-CCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC---CC
Confidence 345899998 654 422 44554 79999999999999999999999988877776655433 21
Q ss_pred hhcccccccCCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcEEEEEcCCchH---------HHHHhhcCCCCcEEEEcC-
Q 024709 131 CREGKQHATFEPPPISSSVSAGIPGEICNGAAKIANKLKASALFVYTKTGQM---------ASLLSRSRPDCPIFAFAP- 200 (264)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~aIVv~T~sG~t---------A~~iSr~RP~~PIiAvT~- 200 (264)
. --+|+.|. .. .+. ..+.+...+++.+-|. |..|.. .+++.+.. ..-|++-.-
T Consensus 117 -~-vTFHRAfD------~~-~d~-----~~ale~L~~lG~~rIL--TSG~~~~a~~g~~~L~~Lv~~a~-~i~Im~GgGv 179 (256)
T 1twd_A 117 -A-VTFHRAFD------MC-ANP-----LYTLNNLAELGIARVL--TSGQKSDALQGLSKIMELIAHRD-APIIMAGAGV 179 (256)
T ss_dssp -E-EEECGGGG------GC-SCH-----HHHHHHHHHHTCCEEE--ECTTSSSTTTTHHHHHHHHTSSS-CCEEEEESSC
T ss_pred -c-EEEECchh------cc-CCH-----HHHHHHHHHcCCCEEE--CCCCCCCHHHHHHHHHHHHHhhC-CcEEEecCCc
Confidence 1 01122221 11 122 2345666677888766 443331 23444444 556665432
Q ss_pred ChhhhhhcccccccEEEEe
Q 024709 201 MSSVRRRLNLQWGLVPFCL 219 (264)
Q Consensus 201 ~~~~aR~L~L~~GV~P~~~ 219 (264)
+..-..++. ..|+.-++.
T Consensus 180 ~~~Ni~~l~-~tGv~e~H~ 197 (256)
T 1twd_A 180 RAENLHHFL-DAGVLEVHS 197 (256)
T ss_dssp CTTTHHHHH-HHTCSEEEE
T ss_pred CHHHHHHHH-HcCCCeEeE
Confidence 233333444 566666653
No 399
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=22.77 E-value=1.6e+02 Score=25.81 Aligned_cols=51 Identities=18% Similarity=0.320 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHh----------CCCEEEEhhhhhhhhhCCCCChHHHHHHHH-HHHhccccccccccc
Q 024709 49 PSIQEKIVQLCRQL----------NKPVIVASQLLESMIEYPIPTRAEVADVSE-LVRQQADALMLSGES 107 (264)
Q Consensus 49 ~~~qk~ii~~~~~~----------gkpv~~atq~leSM~~~~~ptrae~~dv~~-~v~~g~d~~~ls~et 107 (264)
+..-.++++..++. ++|+++= .++.-+..|..+++. +...|+|++.+++-|
T Consensus 187 ~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vK--------i~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~ 248 (336)
T 1f76_A 187 GEALDDLLTAIKNKQNDLQAMHHKYVPIAVK--------IAPDLSEEELIQVADSLVRHNIDGVIATNTT 248 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCCEEEE--------CCSCCCHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred HHHHHHHHHHHHHHHHhhhhcccccCceEEE--------ecCCCCHHHHHHHHHHHHHcCCcEEEEeCCc
Confidence 34445566665553 7899982 234445556555555 456799999998744
No 400
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=22.75 E-value=2e+02 Score=20.02 Aligned_cols=66 Identities=14% Similarity=0.193 Sum_probs=38.2
Q ss_pred HHHHHHhcCCcEEEEEcC----CchH-HHHHhhcCCCCcEEEEcCChhhh-hhcccccccEEEEecCCCCHHHH
Q 024709 161 AAKIANKLKASALFVYTK----TGQM-ASLLSRSRPDCPIFAFAPMSSVR-RRLNLQWGLVPFCLNFSDDMESN 228 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T~----sG~t-A~~iSr~RP~~PIiAvT~~~~~a-R~L~L~~GV~P~~~~~~~~~e~~ 228 (264)
+.+...+.+.+.|++--. +|.. .+.+. .++..||+.+|...... ..-.+..|+.-++.++. +.++.
T Consensus 38 al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr-~~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~-~~~~l 109 (120)
T 3f6p_A 38 AVEMVEELQPDLILLDIMLPNKDGVEVCREVR-KKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPF-STREL 109 (120)
T ss_dssp HHHHHHTTCCSEEEEETTSTTTHHHHHHHHHH-TTCCSCEEEEEESSCHHHHHHHHHTTCCEEEEESC-CHHHH
T ss_pred HHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHH-hcCCCCEEEEECCCChHHHHHHHhCCcceeEcCCC-CHHHH
Confidence 344455667787666542 3332 33333 35679999999765432 22346778888877654 34443
No 401
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=22.66 E-value=1.2e+02 Score=34.12 Aligned_cols=86 Identities=16% Similarity=0.130 Sum_probs=53.8
Q ss_pred ceEEEeccC-HHHHhcHHHHHhh-cceee---ecCCCcccCCCCCChHHHHHHHHHHHHH-hCCCEEEEhhhhhhhhhCC
Q 024709 7 IAVIAKIES-IDSLKNLNEIILA-SDGAM---VARGDLGAQVPLEQVPSIQEKIVQLCRQ-LNKPVIVASQLLESMIEYP 80 (264)
Q Consensus 7 ~~iiakIE~-~~~~~n~~eI~~~-~Dgi~---i~rgdL~~~~~~~~v~~~qk~ii~~~~~-~gkpv~~atq~leSM~~~~ 80 (264)
+.++..+-+ .+|.+....+.+. +|+|+ +-=+|=|-+.+.+++..-.-.++...++ .+.|+|.|..+-
T Consensus 693 i~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~------- 765 (2060)
T 2uva_G 693 IRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG------- 765 (2060)
T ss_dssp CSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCC-------
T ss_pred CeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCC-------
Confidence 334443333 3445444555666 99998 6656666776655543334455555555 478999877433
Q ss_pred CCChHHHHHHHHHH-----------Hhcccccccc
Q 024709 81 IPTRAEVADVSELV-----------RQQADALMLS 104 (264)
Q Consensus 81 ~ptrae~~dv~~~v-----------~~g~d~~~ls 104 (264)
.-.|++-++ ..|||+|++.
T Consensus 766 -----~g~~i~aaltg~ws~~~g~palGAdgV~~G 795 (2060)
T 2uva_G 766 -----GSEDTYPYLTGSWSTKFGYPPMPFDGCMFG 795 (2060)
T ss_dssp -----SHHHHHHHHHTCGGGTTTSCCCCCSCEEES
T ss_pred -----CHHHHHHHhcCcchhhcCCCCCCCCEEEEc
Confidence 335778898 8999998863
No 402
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=22.65 E-value=2.5e+02 Score=21.26 Aligned_cols=39 Identities=5% Similarity=0.102 Sum_probs=27.0
Q ss_pred cccEEEEecCCCCHHHHHHHHHHHHHHcCCCCCCCEEEEEec
Q 024709 212 WGLVPFCLNFSDDMESNLNQTFSLLKARGLIKSGDLIIVVSD 253 (264)
Q Consensus 212 ~GV~P~~~~~~~~~e~~i~~al~~~~~~g~~~~GD~VVvvsG 253 (264)
..+..+-++...++++..++..+..++ +..||-|++.+-
T Consensus 31 ~~~~aid~~~~~~~~~~~~~i~~~i~~---~d~~~GVLiL~D 69 (130)
T 3gx1_A 31 ESGIALDMPLTVEVKAMYEKLKQTVVK---LNPVKGVLILSD 69 (130)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHT---SCCTTCEEEEEC
T ss_pred cCEEEEEecCCCCHHHHHHHHHHHHHh---hCCCCCEEEEEe
Confidence 556666677777888887777676665 346777777654
No 403
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=22.56 E-value=90 Score=26.06 Aligned_cols=52 Identities=27% Similarity=0.351 Sum_probs=31.3
Q ss_pred HHHhcHHHHHhhcceeeecCCCcccCCCC--C---ChHHHHH----HHHHHHHHhCCCEEE
Q 024709 17 DSLKNLNEIILASDGAMVARGDLGAQVPL--E---QVPSIQE----KIVQLCRQLNKPVIV 68 (264)
Q Consensus 17 ~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~--~---~v~~~qk----~ii~~~~~~gkpv~~ 68 (264)
+.++.+++.+.....-.+|=|..|++... . .....|+ ..++.|++.|+||++
T Consensus 84 ~~~~~l~~~~~~~~~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~i 144 (272)
T 2y1h_A 84 KDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNV 144 (272)
T ss_dssp HHHHHHHHHHHHHGGGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 44555555554321223455788888631 1 1245564 667889999999998
No 404
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=22.52 E-value=51 Score=29.58 Aligned_cols=81 Identities=14% Similarity=0.158 Sum_probs=52.4
Q ss_pred cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhh---hhhhhCCC---CChHHHHHHHHHHHhcccccc
Q 024709 29 SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLL---ESMIEYPI---PTRAEVADVSELVRQQADALM 102 (264)
Q Consensus 29 ~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~l---eSM~~~~~---ptrae~~dv~~~v~~g~d~~~ 102 (264)
-+-+|+.-. ++|+++-...-|++++.|+..|..|=.=-..+ |.=+.+.. -....-.|+..++.-|+|++-
T Consensus 114 FtSVMiDgS----~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~LA 189 (306)
T 3pm6_A 114 FDSIMVDMS----HFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWLA 189 (306)
T ss_dssp CSEEEECCT----TSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEEC
T ss_pred CCEEEEeCC----CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcCCCEEE
Confidence 567899633 55788889999999999999998774210000 00000000 001112344667789999999
Q ss_pred ccccccCCCCh
Q 024709 103 LSGESAMGQFP 113 (264)
Q Consensus 103 ls~eta~G~yP 113 (264)
.+--|+-|.|+
T Consensus 190 vaiGt~HG~Yk 200 (306)
T 3pm6_A 190 PAFGNVHGNYG 200 (306)
T ss_dssp CCSSCCSSCCC
T ss_pred EEcCccccCcC
Confidence 99999999995
No 405
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=22.50 E-value=1.6e+02 Score=24.66 Aligned_cols=60 Identities=13% Similarity=0.111 Sum_probs=40.8
Q ss_pred HHHhCCCEEEEhhhhhhhhhCCCC-ChHHH-HHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 59 CRQLNKPVIVASQLLESMIEYPIP-TRAEV-ADVSELVRQQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 59 ~~~~gkpv~~atq~leSM~~~~~p-trae~-~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
+...+.|++.... ..+ +..+. ..+..++..|+|++.....-.....|.++++.+.+++.+
T Consensus 198 ~~~~~ipvva~GG--------i~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 198 VKGCPAPVVVAGG--------PKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHHCSSCEEEECC--------SCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEeC--------CCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHHHHHHHhc
Confidence 3345788887442 122 23332 226677789999999988777778899998888877654
No 406
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A*
Probab=22.47 E-value=31 Score=29.44 Aligned_cols=39 Identities=13% Similarity=0.047 Sum_probs=20.2
Q ss_pred EEEcCCchHHHHHhhcCCC------Cc-EEEEcCChhhhhhcccccc
Q 024709 174 FVYTKTGQMASLLSRSRPD------CP-IFAFAPMSSVRRRLNLQWG 213 (264)
Q Consensus 174 Vv~T~sG~tA~~iSr~RP~------~P-IiAvT~~~~~aR~L~L~~G 213 (264)
+++--+|+|+..++++=+. .+ +-++|++..++..|. ..|
T Consensus 25 ~I~LgsGST~~~~~~~L~~~~~~~~l~~itvVTnS~~~a~~l~-~~g 70 (227)
T 1uj6_A 25 VVGLGTGSTARYAVLELARRLREGELKGVVGVPTSRATEELAK-REG 70 (227)
T ss_dssp EEEECCSHHHHHHHHHHHHHHHTTSSCSCEEEESSHHHHHHHH-HTT
T ss_pred EEEEcCCHHHHHHHHHHhhhhhhcCCCCEEEECCcHHHHHHHH-hCC
Confidence 4455666665555443221 13 555666666666654 444
No 407
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=22.39 E-value=2e+02 Score=20.00 Aligned_cols=73 Identities=12% Similarity=0.074 Sum_probs=41.7
Q ss_pred HHHHhcCCcEEEEEc----CCch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHHHH
Q 024709 163 KIANKLKASALFVYT----KTGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFSLL 236 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T----~sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~~~ 236 (264)
....+.+.+.+++-- .+|. ..+.+.+..|..||+.+|....... .-.+-.|+.-++.++. +.++. ..+++.+
T Consensus 41 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~-~~~~l-~~~i~~~ 118 (126)
T 1dbw_A 41 AFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPF-EDTVI-IEAIERA 118 (126)
T ss_dssp HHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSC-CHHHH-HHHHHHH
T ss_pred HHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCC-CHHHH-HHHHHHH
Confidence 334455566555532 3443 3456666679999999998765322 2245578888777643 34443 3344433
Q ss_pred H
Q 024709 237 K 237 (264)
Q Consensus 237 ~ 237 (264)
.
T Consensus 119 ~ 119 (126)
T 1dbw_A 119 S 119 (126)
T ss_dssp H
T ss_pred H
Confidence 3
No 408
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=22.37 E-value=54 Score=28.66 Aligned_cols=72 Identities=8% Similarity=-0.022 Sum_probs=47.4
Q ss_pred HHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC---hHHHHHHHHHHHhcc
Q 024709 22 LNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT---RAEVADVSELVRQQA 98 (264)
Q Consensus 22 ~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt---rae~~dv~~~v~~g~ 98 (264)
++++++-+|.+.++-..|. ++ +.-.....++++.|+++|+|+++=. |.+|. ..+..+....+...+
T Consensus 144 ~~~~~~~~~~~~~~g~~l~--~~-~~~~~~~~~~~~~ak~~g~~v~~D~--------n~r~~lw~~~~~~~~~~~~l~~~ 212 (351)
T 4gm6_A 144 LSELLKGIRVLHVSGITIA--LS-TFWLEMVVKIIREAKRNGIKISFDM--------NYRAKLWELEAAKRAYQQLLPLV 212 (351)
T ss_dssp HHHHHTTEEEEEEEHHHHH--HC-HHHHHHHHHHHHHHHHTTCEEEEEC--------CCCTTTSCHHHHHHHHHHHGGGC
T ss_pred HHHHHhhcccceecccchh--hc-hhHHHHHHHHHHHHHHcCCCcccCC--------CcCchhhhhhhHHHHHHHHHHhC
Confidence 5677877888877522221 11 2334567789999999999999721 33442 334455566678899
Q ss_pred cccccc
Q 024709 99 DALMLS 104 (264)
Q Consensus 99 d~~~ls 104 (264)
|.+..+
T Consensus 213 dil~~N 218 (351)
T 4gm6_A 213 DYCSAG 218 (351)
T ss_dssp SEEECC
T ss_pred CccccC
Confidence 998887
No 409
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=22.36 E-value=2e+02 Score=25.14 Aligned_cols=83 Identities=14% Similarity=0.357 Sum_probs=50.2
Q ss_pred hcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHHh
Q 024709 20 KNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVRQ 96 (264)
Q Consensus 20 ~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~~ 96 (264)
.+++++++- +|.|+|+ .|... ...++.+|-++||+|++ ..| ..+.+|...+..+...
T Consensus 56 ~~~~~~l~~~~~D~V~i~-------tp~~~----h~~~~~~al~~gk~vl~---------EKP~~~~~~~~~~l~~~a~~ 115 (354)
T 3db2_A 56 ATMEALLAREDVEMVIIT-------VPNDK----HAEVIEQCARSGKHIYV---------EKPISVSLDHAQRIDQVIKE 115 (354)
T ss_dssp SSHHHHHHCSSCCEEEEC-------SCTTS----HHHHHHHHHHTTCEEEE---------ESSSCSSHHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCCCEEEEe-------CChHH----HHHHHHHHHHcCCEEEE---------ccCCCCCHHHHHHHHHHHHH
Confidence 578899854 8999996 33322 24456678899999997 555 6777887777665543
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 97 QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 97 g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
- ...+.-+.. .--+| .++.+++++.+
T Consensus 116 ~-~~~~~v~~~-~R~~p--~~~~~k~~i~~ 141 (354)
T 3db2_A 116 T-GVKFLCGHS-SRRLG--ALRKMKEMIDT 141 (354)
T ss_dssp H-CCCEEEECG-GGGSH--HHHHHHHHHHT
T ss_pred c-CCeEEEeec-hhcCH--HHHHHHHHHhc
Confidence 2 122222221 11224 66667776654
No 410
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=22.33 E-value=47 Score=31.25 Aligned_cols=50 Identities=12% Similarity=0.135 Sum_probs=34.0
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
++.+++. .+||.+. -+|.-.+|......++++.+.|+||+.+||...-.+
T Consensus 321 l~a~~~~g~~GiVle------g~G~Gn~p~~~~~~l~~a~~~Gi~VV~~Sqc~~G~V 371 (438)
T 1zq1_A 321 IDFLVDKGYKGIVIE------GTGLGHTPNDIIPSIERAVEEGVAVCMTSQCIYGRV 371 (438)
T ss_dssp HHHHHHTTCSEEEEE------EBTTTBCCGGGHHHHHHHHHTTCEEEEEESSSBSCC
T ss_pred HHHHHhCCCCEEEEe------eECCCCCCHHHHHHHHHHHHCCCEEEEeCCCCCCcc
Confidence 5566665 8999996 333333334444556777889999999999875543
No 411
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=22.33 E-value=33 Score=28.10 Aligned_cols=33 Identities=12% Similarity=0.338 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCchHHHHH-----hhcCCCCcEEEEcCCh
Q 024709 169 KASALFVYTKTGQMASLL-----SRSRPDCPIFAFAPMS 202 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~i-----Sr~RP~~PIiAvT~~~ 202 (264)
+-+.+|+++.||+|...+ +|-| .+|++++|.+.
T Consensus 131 ~~DvvI~iS~SG~t~~~i~~~~~ak~~-G~~vIaIT~~~ 168 (212)
T 2i2w_A 131 EGDVLLGISTSGNSANVIKAIAAAREK-GMKVITLTGKD 168 (212)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHH-TCEEEEEEETT
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHC-CCeEEEEECCC
Confidence 457899999999986544 3333 69999999875
No 412
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=22.24 E-value=2.2e+02 Score=20.28 Aligned_cols=65 Identities=9% Similarity=0.092 Sum_probs=36.4
Q ss_pred HHHHhcCCcEEEEEcC----Cch-HHHHHhhcC--CCCcEEEEcCChhhhhh-cccccccEEEEecCCCCHHHH
Q 024709 163 KIANKLKASALFVYTK----TGQ-MASLLSRSR--PDCPIFAFAPMSSVRRR-LNLQWGLVPFCLNFSDDMESN 228 (264)
Q Consensus 163 ~lA~~l~A~aIVv~T~----sG~-tA~~iSr~R--P~~PIiAvT~~~~~aR~-L~L~~GV~P~~~~~~~~~e~~ 228 (264)
....+.+.+.|++-.. +|. ..+.+.+.. |.+||+.+|........ -.+..|+.-++.++. +.++.
T Consensus 40 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~-~~~~l 112 (140)
T 3n53_A 40 EQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPF-NRNDL 112 (140)
T ss_dssp HHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSC-CHHHH
T ss_pred HHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCC-CHHHH
Confidence 3444556787776543 232 345555555 89999999987654322 246678888777643 44443
No 413
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=22.17 E-value=2.7e+02 Score=24.40 Aligned_cols=87 Identities=14% Similarity=0.200 Sum_probs=0.0
Q ss_pred CcceEEEeccC------HHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEE----EEhhhh
Q 024709 5 VNIAVIAKIES------IDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVI----VASQLL 73 (264)
Q Consensus 5 ~~~~iiakIE~------~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~----~atq~l 73 (264)
.++.|++=+++ .++++|.-.+++. +|||-+-=| ..+...|++..+.|.||. .--|-.
T Consensus 89 ~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg------------~~~~~~i~~l~~~GIpv~gHlgltPq~~ 156 (275)
T 3vav_A 89 PRALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGG------------EWLAETVRFLVERAVPVCAHVGLTPQSV 156 (275)
T ss_dssp CSSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECC------------GGGHHHHHHHHHTTCCEEEEEESCGGGH
T ss_pred CCCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCc------------hhHHHHHHHHHHCCCCEEEecCCCceEE
Q ss_pred hhh----hhCCCCChHH--HHHHHHHHHhccccccc
Q 024709 74 ESM----IEYPIPTRAE--VADVSELVRQQADALML 103 (264)
Q Consensus 74 eSM----~~~~~ptrae--~~dv~~~v~~g~d~~~l 103 (264)
..+ +..-...+++ +.|..-....|+|+++|
T Consensus 157 ~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivl 192 (275)
T 3vav_A 157 HAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVL 192 (275)
T ss_dssp HHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred eccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEe
No 414
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=22.14 E-value=1.5e+02 Score=26.20 Aligned_cols=84 Identities=14% Similarity=0.123 Sum_probs=51.7
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- +|.|+|+ .|.. ....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 76 ~~~~~~ll~~~~~D~V~i~-------tp~~----~h~~~~~~al~aGk~Vl~---------EKPla~~~~e~~~l~~~a~ 135 (357)
T 3ec7_A 76 YNDYHDLINDKDVEVVIIT-------ASNE----AHADVAVAALNANKYVFC---------EKPLAVTAADCQRVIEAEQ 135 (357)
T ss_dssp ESSHHHHHHCTTCCEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------ESSSCSSHHHHHHHHHHHH
T ss_pred eCCHHHHhcCCCCCEEEEc-------CCcH----HHHHHHHHHHHCCCCEEe---------ecCccCCHHHHHHHHHHHH
Confidence 3578888885 8999996 2322 235667788899999997 555 567777776666543
Q ss_pred h-ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 Q-QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~-g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
. |.-.+|..-- .--+| .++.+++++.+
T Consensus 136 ~~g~~~~~v~~~--~R~~p--~~~~~k~~i~~ 163 (357)
T 3ec7_A 136 KNGKRMVQIGFM--RRYDK--GYVQLKNIIDS 163 (357)
T ss_dssp HHTSCCEEEECG--GGGSH--HHHHHHHHHHH
T ss_pred HhCCeEEEEeec--ccCCH--HHHHHHHHHhc
Confidence 3 3322233211 11234 66777776654
No 415
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=22.12 E-value=1.7e+02 Score=25.50 Aligned_cols=84 Identities=17% Similarity=0.255 Sum_probs=52.0
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- .|.|+|+ .|.. .-..++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 71 ~~~~~~ll~~~~vD~V~i~-------tp~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~ 130 (340)
T 1zh8_A 71 FDSYEELLESGLVDAVDLT-------LPVE----LNLPFIEKALRKGVHVIC---------EKPISTDVETGKKVVELSE 130 (340)
T ss_dssp ESCHHHHHHSSCCSEEEEC-------CCGG----GHHHHHHHHHHTTCEEEE---------ESSSSSSHHHHHHHHHHHH
T ss_pred cCCHHHHhcCCCCCEEEEe-------CCch----HHHHHHHHHHHCCCcEEE---------eCCCCCCHHHHHHHHHHHH
Confidence 3578899874 8999996 2322 235677788999999997 555 468888777777654
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 96 QQADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 96 ~g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
.. ..++.-+.. .--+| +++.+++++++
T Consensus 131 ~~-g~~~~v~~~-~R~~p--~~~~~k~~i~~ 157 (340)
T 1zh8_A 131 KS-EKTVYIAEN-FRHVP--AFWKAKELVES 157 (340)
T ss_dssp HC-SSCEEEECG-GGGCH--HHHHHHHHHHT
T ss_pred Hc-CCeEEEEec-ccCCH--HHHHHHHHHhc
Confidence 42 222222111 11233 56666666654
No 416
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=22.06 E-value=86 Score=27.20 Aligned_cols=79 Identities=20% Similarity=0.291 Sum_probs=42.4
Q ss_pred HHHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHH----------------HHHHHHHHh-CCCEEEEhhhhhhhhhC
Q 024709 17 DSLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQE----------------KIVQLCRQL-NKPVIVASQLLESMIEY 79 (264)
Q Consensus 17 ~~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk----------------~ii~~~~~~-gkpv~~atq~leSM~~~ 79 (264)
..++.++.+.+.+|+|.|| .-+ +=|..+=|.+|+ +++++.++. ..|+++-+- .+-+-.
T Consensus 31 ~~~~~~~~l~~~aD~IElG-~Pf--sdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y-~n~v~~- 105 (271)
T 1ujp_A 31 GFLQAVEEVLPYADLLEIG-LPY--SDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTY-LNPVLA- 105 (271)
T ss_dssp HHHHHHHHHGGGCSSEEEE-CCC--CC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECC-HHHHHH-
T ss_pred HHHHHHHHHHhcCCEEEEC-CCC--CCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEec-CcHHHH-
Confidence 3455566666669999995 111 224456667764 556666665 789998320 000000
Q ss_pred CCCChHHHHHHHHHHHhcccccccc
Q 024709 80 PIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 80 ~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
.+...+ +..+...|+|++++.
T Consensus 106 -~g~~~f---~~~~~~aG~dGviv~ 126 (271)
T 1ujp_A 106 -WGPERF---FGLFKQAGATGVILP 126 (271)
T ss_dssp -HCHHHH---HHHHHHHTCCEEECT
T ss_pred -hhHHHH---HHHHHHcCCCEEEec
Confidence 122222 344566799988875
No 417
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=22.02 E-value=2.2e+02 Score=25.86 Aligned_cols=69 Identities=19% Similarity=0.160 Sum_probs=44.3
Q ss_pred CHHHHhcHHHHHhh-cceeeec--CCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHH
Q 024709 15 SIDSLKNLNEIILA-SDGAMVA--RGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVAD 89 (264)
Q Consensus 15 ~~~~~~n~~eI~~~-~Dgi~i~--rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~d 89 (264)
+....+.++.+++. +|.|.+. -|. +..+.++++..++. +.|++.-+ ..|. .|
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~G~----------~~~~~e~I~~ir~~~~~~~Vi~G~----------V~T~---e~ 154 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAHAH----------AKYVGKTLKSLRQLLGSRCIMAGN----------VATY---AG 154 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSCCS----------SHHHHHHHHHHHHHHTTCEEEEEE----------ECSH---HH
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCCCC----------cHhHHHHHHHHHHhcCCCeEEEcC----------cCCH---HH
Confidence 45566777777777 8877773 332 12345567777775 78888621 2233 24
Q ss_pred HHHHHHhcccccccccc
Q 024709 90 VSELVRQQADALMLSGE 106 (264)
Q Consensus 90 v~~~v~~g~d~~~ls~e 106 (264)
...++..|+|++.++..
T Consensus 155 A~~a~~aGaD~I~Vg~g 171 (361)
T 3r2g_A 155 ADYLASCGADIIKAGIG 171 (361)
T ss_dssp HHHHHHTTCSEEEECCS
T ss_pred HHHHHHcCCCEEEEcCC
Confidence 46788899999999644
No 418
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=22.00 E-value=1.5e+02 Score=25.78 Aligned_cols=62 Identities=16% Similarity=0.129 Sum_probs=41.8
Q ss_pred CCcceEEEec---cCHHHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEE
Q 024709 4 LVNIAVIAKI---ESIDSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVA 69 (264)
Q Consensus 4 ~~~~~iiakI---E~~~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~a 69 (264)
+.++.||+-+ -+.++++....--+. +||+|+-+-...- .+.+.+...-+.|.+++ +.|+++-
T Consensus 69 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~-~~~~~l~~~f~~ia~a~---~lPiilY 134 (292)
T 3daq_A 69 DKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNK-TNQRGLVKHFEAIADAV---KLPVVLY 134 (292)
T ss_dssp TTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC-CCHHHHHHHHHHHHHHH---CSCEEEE
T ss_pred CCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 3456777776 467778777777776 9999998665432 23355555556665554 8999974
No 419
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=21.93 E-value=1.8e+02 Score=23.93 Aligned_cols=194 Identities=13% Similarity=0.089 Sum_probs=90.0
Q ss_pred HHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccc
Q 024709 22 LNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADA 100 (264)
Q Consensus 22 ~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~ 100 (264)
.....+. +|.|.+- |+.... ......-..+-+.|+..+.|+++...+ -+ ..|+..+...|+|+
T Consensus 37 a~~~~~~Gad~i~v~--d~~~~~--~~~~~~~~~i~~i~~~~~iPvi~~Ggi---------~~---~~~~~~~~~~Gad~ 100 (252)
T 1ka9_F 37 ARAYDEAGADELVFL--DISATH--EERAILLDVVARVAERVFIPLTVGGGV---------RS---LEDARKLLLSGADK 100 (252)
T ss_dssp HHHHHHHTCSCEEEE--ECCSST--TCHHHHHHHHHHHHTTCCSCEEEESSC---------CS---HHHHHHHHHHTCSE
T ss_pred HHHHHHcCCCEEEEE--cCCccc--cCccccHHHHHHHHHhCCCCEEEECCc---------CC---HHHHHHHHHcCCCE
Confidence 3333333 7888775 443221 122223334445566679999986543 12 23567788889999
Q ss_pred ccccccccCCCChHHHHHHHHHHHHHHH--hh-hhccccc--ccCCCCCCCCCCCCCchHHHHHHHHHHHHhcCCcEEEE
Q 024709 101 LMLSGESAMGQFPDKALAVLRSVSLRIE--KW-CREGKQH--ATFEPPPISSSVSAGIPGEICNGAAKIANKLKASALFV 175 (264)
Q Consensus 101 ~~ls~eta~G~yP~eav~~m~~i~~~~E--~~-~~~~~~~--~~~~~~~~~~~~~~~~~~aIA~aAv~lA~~l~A~aIVv 175 (264)
+++....... | ..+.+++.... .. ..-.-+. ..+. -........+..+ ....+..+.+.+++.|++
T Consensus 101 V~lg~~~l~~--p----~~~~~~~~~~~~~~i~~~~~~~~~~g~~~-v~~~g~~~~~~~~--~~e~~~~~~~~G~~~i~~ 171 (252)
T 1ka9_F 101 VSVNSAAVRR--P----ELIRELADHFGAQAVVLAIDARWRGDFPE-VHVAGGRVPTGLH--AVEWAVKGVELGAGEILL 171 (252)
T ss_dssp EEECHHHHHC--T----HHHHHHHHHHCGGGEEEEEEEEEETTEEE-EEETTTTEEEEEE--HHHHHHHHHHHTCCEEEE
T ss_pred EEEChHHHhC--c----HHHHHHHHHcCCCcEEEEEEEecCCCCEE-EEECCCccccCCc--HHHHHHHHHHcCCCEEEE
Confidence 9997553222 2 23444443331 11 0000000 0000 0000000000001 112234455678887666
Q ss_pred Ec--CCch----HHHHHhhcCC--CCcEEEEc--CChhhhhhcccccccEEEEecCC-CCHHHHHHHHHHHHHHcCC
Q 024709 176 YT--KTGQ----MASLLSRSRP--DCPIFAFA--PMSSVRRRLNLQWGLVPFCLNFS-DDMESNLNQTFSLLKARGL 241 (264)
Q Consensus 176 ~T--~sG~----tA~~iSr~RP--~~PIiAvT--~~~~~aR~L~L~~GV~P~~~~~~-~~~e~~i~~al~~~~~~g~ 241 (264)
.+ ++|. .-..+.+.++ +.|+++-. .+..-++++. ..|+.-+.+... ...+..+.++++++.+.|+
T Consensus 172 ~~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~-~~Gadgv~vgsal~~~~~~~~~~~~~l~~~~~ 247 (252)
T 1ka9_F 172 TSMDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAF-QAGAEAALAASVFHFGEIPIPKLKRYLAEKGV 247 (252)
T ss_dssp EETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEESHHHHTTSSCHHHHHHHHHHTTC
T ss_pred ecccCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH-HCCCHHHHHHHHHHcCCCCHHHHHHHHHHCCC
Confidence 42 3333 1334444333 68999954 3433344443 357777666421 1111124556677788776
No 420
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=21.92 E-value=38 Score=30.72 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=24.2
Q ss_pred CcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCCh
Q 024709 170 ASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMS 202 (264)
Q Consensus 170 A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~ 202 (264)
-+.+|++|.||.|...+. |-+-.++++++|++.
T Consensus 102 ~dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~ 139 (372)
T 3tbf_A 102 GSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVP 139 (372)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSS
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCC
Confidence 368999999999876553 333228999999754
No 421
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=21.86 E-value=2.3e+02 Score=22.47 Aligned_cols=77 Identities=14% Similarity=0.060 Sum_probs=44.4
Q ss_pred cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccccc
Q 024709 29 SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESA 108 (264)
Q Consensus 29 ~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta 108 (264)
.|.+-+.++-.+...+..-. . +++-+.+.. ..|+.+... -.|. .+..++..|+|++...+---
T Consensus 128 ~d~v~~~~~~~~~~~g~~~~-~--~~i~~~~~~-~~pi~v~GG--------I~~~-----~~~~~~~aGad~vvvGsaI~ 190 (207)
T 3ajx_A 128 AKFVEMHAGLDEQAKPGFDL-N--GLLAAGEKA-RVPFSVAGG--------VKVA-----TIPAVQKAGAEVAVAGGAIY 190 (207)
T ss_dssp CSEEEEECCHHHHTSTTCCT-H--HHHHHHHHH-TSCEEEESS--------CCGG-----GHHHHHHTTCSEEEESHHHH
T ss_pred CCEEEEEecccccccCCCch-H--HHHHHhhCC-CCCEEEECC--------cCHH-----HHHHHHHcCCCEEEEeeecc
Confidence 78773433332222232211 1 444444443 678876332 1232 44677899999999876665
Q ss_pred CCCChHHHHHHHHH
Q 024709 109 MGQFPDKALAVLRS 122 (264)
Q Consensus 109 ~G~yP~eav~~m~~ 122 (264)
....|.++++.+.+
T Consensus 191 ~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 191 GAADPAAAAKELRA 204 (207)
T ss_dssp TSSSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 56679888887754
No 422
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=21.64 E-value=1.4e+02 Score=25.60 Aligned_cols=42 Identities=17% Similarity=0.389 Sum_probs=28.3
Q ss_pred HHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 22 LNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 22 ~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
++++++-+|.+++. |.+....+ .....++++.|++.|+|+++
T Consensus 123 ~~~~~~~~~~v~~~-g~~~~~~~----~~~~~~~~~~a~~~g~~v~~ 164 (323)
T 2f02_A 123 FDQLIKQAEIVTIS-GSLAKGLP----SDFYQELVQKAHAQEVKVLL 164 (323)
T ss_dssp HHHHHTTCSEEEEE-SCCCBTSC----TTHHHHHHHHHHHTTCEEEE
T ss_pred HHHhccCCCEEEEE-CCCCCCCC----hHHHHHHHHHHHHCCCEEEE
Confidence 34456668988875 33332222 24667889999999999987
No 423
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=21.52 E-value=85 Score=26.12 Aligned_cols=43 Identities=19% Similarity=0.334 Sum_probs=30.3
Q ss_pred HHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEh
Q 024709 18 SLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVAS 70 (264)
Q Consensus 18 ~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~at 70 (264)
-.+.++.++.- +|||++.+.|.. .....++.+++.|.|+++..
T Consensus 46 ~~~~i~~l~~~~vdgiii~~~~~~----------~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 46 TLNAIDSLAASGAKGFVICTPDPK----------LGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCGG----------GHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHcCCCEEEEeCCCch----------hhHHHHHHHHHCCCcEEEeC
Confidence 34566776665 999999875531 23456677889999999743
No 424
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A*
Probab=21.48 E-value=2.6e+02 Score=27.43 Aligned_cols=73 Identities=8% Similarity=0.124 Sum_probs=46.3
Q ss_pred HHHHHHHHhCCCEEEEh------------hhhhhhhh-CCCCChHHHH-HHHHHHHhccccccccccccCCCChHHHHHH
Q 024709 54 KIVQLCRQLNKPVIVAS------------QLLESMIE-YPIPTRAEVA-DVSELVRQQADALMLSGESAMGQFPDKALAV 119 (264)
Q Consensus 54 ~ii~~~~~~gkpv~~at------------q~leSM~~-~~~ptrae~~-dv~~~v~~g~d~~~ls~eta~G~yP~eav~~ 119 (264)
.-+..++++|.||. +| .+++.+.. +..-.+.=+. -+.-|-..|+|+..+.-|+.. ++.+.+..
T Consensus 113 ~widaAHrnGV~Vl-Gt~~fe~~~~gg~~~~~~~lL~~~~~~~~~~a~kLv~~a~~yGFDGw~IN~E~~~--~~~~~~~~ 189 (626)
T 2vtf_A 113 DVIDASHRNGVPIL-GNVFFPPTVYGGQLEWLEQMLEQEEDGSFPLADKLLEVADYYGFDGWFINQQTEG--ADEGTAEA 189 (626)
T ss_dssp HHHHHHHHTTCCEE-EEEEECCGGGTCCHHHHHHHTCCCTTCCCHHHHHHHHHHHHHTCCEEEEEECCTT--CCHHHHHH
T ss_pred HHHHHHHHcCCEEE-EEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHHHHHHhCCCceEEeecccc--CCHHHHHH
Confidence 46889999999998 44 34555552 2222211111 223355799999999999863 24567777
Q ss_pred HHHHHHHHHh
Q 024709 120 LRSVSLRIEK 129 (264)
Q Consensus 120 m~~i~~~~E~ 129 (264)
|...+++..+
T Consensus 190 l~~F~~~L~~ 199 (626)
T 2vtf_A 190 MQAFLVYLQE 199 (626)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776544
No 425
>1em9_A GAG polyprotein capsid protein P27; virus/viral protein; 2.05A {Rous sarcoma virus - prague C} SCOP: a.73.1.1
Probab=21.43 E-value=48 Score=26.77 Aligned_cols=57 Identities=11% Similarity=0.219 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhcccccccccc
Q 024709 49 PSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGE 106 (264)
Q Consensus 49 ~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~e 106 (264)
+...|++..+|.++|--.=.+-++||....++. +.-+..-++.+++-|.|.++=-+|
T Consensus 16 ~K~ikeLk~A~~~yG~~aP~T~a~lEaL~~~~L-~P~Dwk~laRa~Lsgg~y~LWksE 72 (154)
T 1em9_A 16 PKLITRLADTVRTKGLRSPITMAEVEALMSSPL-LPHDVTNLMRVILGPAPYALWMDA 72 (154)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHTSSCC-CHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHcCCC-ChHHHHHHHHHHhcccchhhHHHH
Confidence 567899999999999888888899999875554 455788889999999998776655
No 426
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=21.42 E-value=1.4e+02 Score=25.51 Aligned_cols=81 Identities=23% Similarity=0.224 Sum_probs=50.4
Q ss_pred hcHHHHHh--hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHHh
Q 024709 20 KNLNEIIL--ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVRQ 96 (264)
Q Consensus 20 ~n~~eI~~--~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~~ 96 (264)
.+++|+++ -.|.|+|+ .|.. ....++.+|-++||+|++ +.| ..+.+|...+..+...
T Consensus 55 ~~~~ell~~~~vD~V~i~-------tp~~----~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~~ 114 (294)
T 1lc0_A 55 ISLEDALRSQEIDVAYIC-------SESS----SHEDYIRQFLQAGKHVLV---------EYPMTLSFAAAQELWELAAQ 114 (294)
T ss_dssp CCHHHHHHCSSEEEEEEC-------SCGG----GHHHHHHHHHHTTCEEEE---------ESCSCSCHHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCCCEEEEe-------CCcH----hHHHHHHHHHHCCCcEEE---------eCCCCCCHHHHHHHHHHHHH
Confidence 57899987 48999996 2321 235677789999999997 445 4577777777766543
Q ss_pred -ccccccccccccCCCChHHHHHHHHHHHH
Q 024709 97 -QADALMLSGESAMGQFPDKALAVLRSVSL 125 (264)
Q Consensus 97 -g~d~~~ls~eta~G~yP~eav~~m~~i~~ 125 (264)
|.- ++.. -.. --+| .++.+++.+.
T Consensus 115 ~g~~-~~~~-~~~-r~~p--~~~~~~~~i~ 139 (294)
T 1lc0_A 115 KGRV-LHEE-HVE-LLME--EFEFLRREVL 139 (294)
T ss_dssp TTCC-EEEE-CGG-GGSH--HHHHHHHHHT
T ss_pred hCCE-EEEE-EhH-hccH--HHHHHHHHHh
Confidence 332 2222 222 2234 5666666543
No 427
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=21.41 E-value=67 Score=26.82 Aligned_cols=42 Identities=12% Similarity=0.085 Sum_probs=28.5
Q ss_pred hcceeeecCCCcccCCCC---CChH-HHHHHHHHHHHHhCCCEEEE
Q 024709 28 ASDGAMVARGDLGAQVPL---EQVP-SIQEKIVQLCRQLNKPVIVA 69 (264)
Q Consensus 28 ~~Dgi~i~rgdL~~~~~~---~~v~-~~qk~ii~~~~~~gkpv~~a 69 (264)
-.|||+|..|-.+..... +.+. ...+.+++.+.+.|||+.--
T Consensus 45 ~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~PvLGI 90 (236)
T 3l7n_A 45 DFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGV 90 (236)
T ss_dssp GCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCEEEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCEEEE
Confidence 479999999888743211 2221 23567888888999998653
No 428
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=21.40 E-value=2.2e+02 Score=20.07 Aligned_cols=76 Identities=8% Similarity=0.057 Sum_probs=43.9
Q ss_pred HHHHHhcCCcEEEEEcC----Cch-HHHHHhh--cCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHH
Q 024709 162 AKIANKLKASALFVYTK----TGQ-MASLLSR--SRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTF 233 (264)
Q Consensus 162 v~lA~~l~A~aIVv~T~----sG~-tA~~iSr--~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al 233 (264)
.....+.+.+.|++-.. +|. ..+.+.+ ..|.+||+++|....... .-.+..|+.-++..+ .+.++. ..++
T Consensus 47 ~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP-~~~~~l-~~~i 124 (143)
T 3cnb_A 47 GDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKP-LNFTLL-EKTI 124 (143)
T ss_dssp HHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESS-CCHHHH-HHHH
T ss_pred HHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCC-CCHHHH-HHHH
Confidence 34445556787776543 333 3455555 468899999997655432 224567888877654 334443 4445
Q ss_pred HHHHHc
Q 024709 234 SLLKAR 239 (264)
Q Consensus 234 ~~~~~~ 239 (264)
+.+.++
T Consensus 125 ~~~~~~ 130 (143)
T 3cnb_A 125 KQLVEQ 130 (143)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 545443
No 429
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=21.33 E-value=1.9e+02 Score=24.83 Aligned_cols=84 Identities=14% Similarity=0.195 Sum_probs=50.5
Q ss_pred HhcHHHHH-hhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHHh
Q 024709 19 LKNLNEII-LASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVRQ 96 (264)
Q Consensus 19 ~~n~~eI~-~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~~ 96 (264)
..++++++ .-+|.|+|+- |.. ....++.+|-++||+|++ ..| ..+.+|...+..+...
T Consensus 52 ~~~~~~~l~~~~D~V~i~t-------p~~----~h~~~~~~al~~gk~V~~---------EKP~~~~~~~~~~l~~~a~~ 111 (325)
T 2ho3_A 52 FDQLEVFFKSSFDLVYIAS-------PNS----LHFAQAKAALSAGKHVIL---------EKPAVSQPQEWFDLIQTAEK 111 (325)
T ss_dssp ESCHHHHHTSSCSEEEECS-------CGG----GHHHHHHHHHHTTCEEEE---------ESSCCSSHHHHHHHHHHHHH
T ss_pred eCCHHHHhCCCCCEEEEeC-------ChH----HHHHHHHHHHHcCCcEEE---------ecCCcCCHHHHHHHHHHHHH
Confidence 35678888 4589999962 322 245666788899999997 444 4567777777665543
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHH
Q 024709 97 QADALMLSGESAMGQFPDKALAVLRSVSLR 126 (264)
Q Consensus 97 g~d~~~ls~eta~G~yP~eav~~m~~i~~~ 126 (264)
. ...+..+ ....-+| +++.+++++.+
T Consensus 112 ~-g~~~~~~-~~~r~~p--~~~~~~~~i~~ 137 (325)
T 2ho3_A 112 N-NCFIFEA-ARNYHEK--AFTTIKNFLAD 137 (325)
T ss_dssp T-TCCEEEE-CTTTTCH--HHHHHHHHHTT
T ss_pred c-CCEEEEE-EhhhcCh--HHHHHHHHhhh
Confidence 2 2222221 1223335 56667766654
No 430
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=21.32 E-value=2.2e+02 Score=20.04 Aligned_cols=67 Identities=15% Similarity=0.141 Sum_probs=38.1
Q ss_pred CcEEEEEc----CCch-HHHHHhhc-CCCCcEEEEcCChhhhhh-cccccccEEEEecCCCCHHHHHHHHHHHHHH
Q 024709 170 ASALFVYT----KTGQ-MASLLSRS-RPDCPIFAFAPMSSVRRR-LNLQWGLVPFCLNFSDDMESNLNQTFSLLKA 238 (264)
Q Consensus 170 A~aIVv~T----~sG~-tA~~iSr~-RP~~PIiAvT~~~~~aR~-L~L~~GV~P~~~~~~~~~e~~i~~al~~~~~ 238 (264)
.+.|++-. .+|. ..+.+.+. .|.+||+.+|........ -.+..|+.-++.++ -+.++. ..+++.+..
T Consensus 53 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP-~~~~~l-~~~i~~~~~ 126 (136)
T 3hdv_A 53 IGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKP-VDLGKL-LELVNKELK 126 (136)
T ss_dssp EEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESS-CCHHHH-HHHHHHHHC
T ss_pred CcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCC-CCHHHH-HHHHHHHhc
Confidence 66555543 2343 34455555 688999999987654222 23567888877764 334443 334444443
No 431
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=21.31 E-value=2.1e+02 Score=25.50 Aligned_cols=84 Identities=15% Similarity=0.256 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEcCCch----------HHHHHhhcCCCCcEEEEcCCh---hhhhhcccccccEEEEecC
Q 024709 155 GEICNGAAKIANKLKASALFVYTKTGQ----------MASLLSRSRPDCPIFAFAPMS---SVRRRLNLQWGLVPFCLNF 221 (264)
Q Consensus 155 ~aIA~aAv~lA~~l~A~aIVv~T~sG~----------tA~~iSr~RP~~PIiAvT~~~---~~aR~L~L~~GV~P~~~~~ 221 (264)
-....++++.|++.++..|+-++..+. ..+..++ +.+||..-..+- ..+++ .+--|..++.++.
T Consensus 27 ~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~--~~VPValHlDHg~~~e~~~~-ai~~GFtSVMiDg 103 (305)
T 1rvg_A 27 MEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE--ARVPVAVHLDHGSSYESVLR-ALRAGFTSVMIDK 103 (305)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH--CSSCEEEEEEEECSHHHHHH-HHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh--CCCcEEEECCCCCCHHHHHH-HHHcCCCeeeeCC
Confidence 458899999999999999998887653 2334455 889998877644 33333 3567999999986
Q ss_pred C-CCHHHHHH---HHHHHHHHcCC
Q 024709 222 S-DDMESNLN---QTFSLLKARGL 241 (264)
Q Consensus 222 ~-~~~e~~i~---~al~~~~~~g~ 241 (264)
+ .+.|+++. +.++++.+.|.
T Consensus 104 S~~p~eENi~~Tk~vv~~ah~~gv 127 (305)
T 1rvg_A 104 SHEDFETNVRETRRVVEAAHAVGV 127 (305)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCC
Confidence 6 45677664 55677777664
No 432
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=21.31 E-value=1.5e+02 Score=25.73 Aligned_cols=73 Identities=12% Similarity=0.135 Sum_probs=41.2
Q ss_pred HhcHHHHHhhcceeeecCCCcccCCCC-CChHHHHHHHHHHHHHh-CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHh
Q 024709 19 LKNLNEIILASDGAMVARGDLGAQVPL-EQVPSIQEKIVQLCRQL-NKPVIVASQLLESMIEYPIPTRAEVADVSELVRQ 96 (264)
Q Consensus 19 ~~n~~eI~~~~Dgi~i~rgdL~~~~~~-~~v~~~qk~ii~~~~~~-gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~ 96 (264)
.+.+..|++.++|.+-.-.=.| -.|. ..++.-....+++++++ ..|+++.. ..-|.. ++..++..
T Consensus 161 ~eri~~i~~~~~gfvY~vS~~G-vTG~~~~~~~~~~~~v~~vr~~~~~pv~vGf---------GI~~~e---~~~~~~~~ 227 (267)
T 3vnd_A 161 ADTLKMVSEQGEGYTYLLSRAG-VTGTESKAGEPIENILTQLAEFNAPPPLLGF---------GIAEPE---QVRAAIKA 227 (267)
T ss_dssp HHHHHHHHHHCCSCEEESCCCC-CC--------CHHHHHHHHHTTTCCCEEECS---------SCCSHH---HHHHHHHT
T ss_pred HHHHHHHHHhCCCcEEEEecCC-CCCCccCCcHHHHHHHHHHHHhcCCCEEEEC---------CcCCHH---HHHHHHHc
Confidence 5789999999876543311111 1121 12333345666666664 67999843 222222 34568889
Q ss_pred cccccccc
Q 024709 97 QADALMLS 104 (264)
Q Consensus 97 g~d~~~ls 104 (264)
|+|++...
T Consensus 228 gADgvVVG 235 (267)
T 3vnd_A 228 GAAGAISG 235 (267)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99999986
No 433
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=21.24 E-value=2.3e+02 Score=22.36 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=42.4
Q ss_pred HHHhcCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHHHHH
Q 024709 164 IANKLKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFSLLK 237 (264)
Q Consensus 164 lA~~l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~~~~ 237 (264)
.......+.+++--. +|. ..+.+.+ +|.+||+.+|....... .-.+..|+.-++.++ .+.++ +..+++.+.
T Consensus 43 ~~~~~~~dlvllD~~l~~~~g~~~~~~l~~-~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp-~~~~~-l~~~i~~~~ 119 (230)
T 2oqr_A 43 EFDRAGADIVLLDLMLPGMSGTDVCKQLRA-RSSVPVIMVTARDSEIDKVVGLELGADDYVTKP-YSARE-LIARIRAVL 119 (230)
T ss_dssp HHHHHCCSEEEEESSCSSSCHHHHHHHHHH-HCSCSEEEEECCHHHHHHHHHHHHCCSCCCCSS-CCHHH-HHHHHHHHH
T ss_pred HHhccCCCEEEEECCCCCCCHHHHHHHHHc-CCCCCEEEEeCCCcHHHHHHHHHcCCCEEEeCC-CCHHH-HHHHHHHHH
Confidence 334456776666432 443 2344444 48999999998876533 234567777766553 34444 344555555
Q ss_pred HcC
Q 024709 238 ARG 240 (264)
Q Consensus 238 ~~g 240 (264)
..+
T Consensus 120 ~~~ 122 (230)
T 2oqr_A 120 RRG 122 (230)
T ss_dssp TTT
T ss_pred hhc
Confidence 443
No 434
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=21.18 E-value=2.3e+02 Score=20.73 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=31.7
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEE
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
++++.++++. .|.++|+- |... ....+++++.|.++|..+.+
T Consensus 54 ~~~l~~~~~~~~id~viia~-------~~~~-~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 54 PKYLERLIKKHCISTVLLAV-------PSAS-QVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp GGGHHHHHHHHTCCEEEECC-------TTSC-HHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEeC-------CCCC-HHHHHHHHHHHHHcCCeEEE
Confidence 5677777765 88999863 3222 35678899999999999987
No 435
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=21.10 E-value=1.8e+02 Score=25.67 Aligned_cols=56 Identities=23% Similarity=0.341 Sum_probs=30.8
Q ss_pred cceeeecCCCcccCCCCCChHHHHHHHHHHHHHh--CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccc
Q 024709 29 SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQL--NKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSG 105 (264)
Q Consensus 29 ~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~--gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~ 105 (264)
+|++||--..+.. .| .+ +.-++++++. .+|+.+-. -|..| +-.|+..|+|.+||.+
T Consensus 169 ~d~vlikdNHi~~-~G--~i----~~Av~~ar~~~~~~~IeVEv-----------~tl~e---a~eAl~aGaD~I~LDn 226 (287)
T 3tqv_A 169 FDAYLIKENHIRS-AG--GI----AKAVTKAKKLDSNKVVEVEV-----------TNLDE---LNQAIAAKADIVMLDN 226 (287)
T ss_dssp SSSEEECTTTC-------CH----HHHHHHHHHHCTTSCEEEEE-----------SSHHH---HHHHHHTTCSEEEEES
T ss_pred ccEEEEeHHHHHH-hC--CH----HHHHHHHHhhCCCCcEEEEe-----------CCHHH---HHHHHHcCCCEEEEcC
Confidence 5777775443322 11 22 3344444543 48888732 22333 3467778999999964
No 436
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=20.99 E-value=2.2e+02 Score=22.39 Aligned_cols=63 Identities=14% Similarity=0.180 Sum_probs=38.0
Q ss_pred CCcEEEEEc----CCch-HHHHHhh----cCCCCcEEEEcCCh-h-hhhhcccccccEEEEecCCCCHHHHHHH
Q 024709 169 KASALFVYT----KTGQ-MASLLSR----SRPDCPIFAFAPMS-S-VRRRLNLQWGLVPFCLNFSDDMESNLNQ 231 (264)
Q Consensus 169 ~A~aIVv~T----~sG~-tA~~iSr----~RP~~PIiAvT~~~-~-~aR~L~L~~GV~P~~~~~~~~~e~~i~~ 231 (264)
..+.|++-- .+|. .++.+.+ +.|.+|||++|... . -...-.+..|+.-++.++.......+..
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~~L~~~i~~ 192 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLNQLANVIRE 192 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCTTHHHHHHH
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHHHHHHHHHH
Confidence 667776643 3454 3344444 26999999999864 2 2222346678888888765544333433
No 437
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=20.98 E-value=1.9e+02 Score=25.69 Aligned_cols=79 Identities=13% Similarity=0.264 Sum_probs=46.5
Q ss_pred CcceEEEeccCH------HHHhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhh
Q 024709 5 VNIAVIAKIESI------DSLKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMI 77 (264)
Q Consensus 5 ~~~~iiakIE~~------~~~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~ 77 (264)
....|+++.|.. +++++.....+. +|+||+- .. +. -..+-+-|++..+|+++ .|++- -
T Consensus 158 ~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e-------~~-~~----~~~~~~i~~~~~~P~~~--n~~~~-g 222 (305)
T 3ih1_A 158 PSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE-------AL-QS----EEEFRLFNSKVNAPLLA--NMTEF-G 222 (305)
T ss_dssp TTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET-------TC-CS----HHHHHHHHHHSCSCBEE--ECCTT-S
T ss_pred CCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc-------CC-CC----HHHHHHHHHHcCCCEEE--eecCC-C
Confidence 456889999886 566666666666 8999982 22 11 13344556667789864 23321 1
Q ss_pred hCCCCChHHHHHHHHHHHhcccccccc
Q 024709 78 EYPIPTRAEVADVSELVRQQADALMLS 104 (264)
Q Consensus 78 ~~~~ptrae~~dv~~~v~~g~d~~~ls 104 (264)
..|.++..| .-..|+..+...
T Consensus 223 ~tp~~~~~e------L~~lGv~~v~~~ 243 (305)
T 3ih1_A 223 KTPYYSAEE------FANMGFQMVIYP 243 (305)
T ss_dssp SSCCCCHHH------HHHTTCSEEEEC
T ss_pred CCCCCCHHH------HHHcCCCEEEEc
Confidence 124455554 334677776654
No 438
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=20.97 E-value=2e+02 Score=24.87 Aligned_cols=58 Identities=14% Similarity=0.073 Sum_probs=40.1
Q ss_pred HhcHHHHHhh--cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCC-CCChHHHHHHHHHHH
Q 024709 19 LKNLNEIILA--SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYP-IPTRAEVADVSELVR 95 (264)
Q Consensus 19 ~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~-~ptrae~~dv~~~v~ 95 (264)
..+++++++- +|.|+|+- |.. ....++.+|-++||+|++ +.| ..+.+|...+..+..
T Consensus 55 ~~~~~~ll~~~~~D~V~i~t-------p~~----~h~~~~~~al~aGkhVl~---------EKP~a~~~~e~~~l~~~a~ 114 (336)
T 2p2s_A 55 AASAEQLITDASIDLIACAV-------IPC----DRAELALRTLDAGKDFFT---------AKPPLTTLEQLDAVQRRVA 114 (336)
T ss_dssp CSCHHHHHTCTTCCEEEECS-------CGG----GHHHHHHHHHHTTCEEEE---------CSSCCSCHHHHHHHHHHHH
T ss_pred cCCHHHHhhCCCCCEEEEeC-------Chh----hHHHHHHHHHHCCCcEEE---------eCCCCCCHHHHHHHHHHHH
Confidence 4678899873 89999963 221 235667788899999997 444 456777777666554
Q ss_pred h
Q 024709 96 Q 96 (264)
Q Consensus 96 ~ 96 (264)
.
T Consensus 115 ~ 115 (336)
T 2p2s_A 115 E 115 (336)
T ss_dssp H
T ss_pred H
Confidence 3
No 439
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=20.89 E-value=36 Score=28.48 Aligned_cols=34 Identities=12% Similarity=0.326 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCchHHHHHh-----hcCCCCcEEEEcCChh
Q 024709 169 KASALFVYTKTGQMASLLS-----RSRPDCPIFAFAPMSS 203 (264)
Q Consensus 169 ~A~aIVv~T~sG~tA~~iS-----r~RP~~PIiAvT~~~~ 203 (264)
+-+.+|++|.||+|...+. |- -.+|+|++|.+..
T Consensus 108 ~~Dv~I~iS~SG~t~~~i~~~~~Ak~-~G~~vI~IT~~~~ 146 (243)
T 3cvj_A 108 NKDVIMIISNSGRNTVPVEMAIESRN-IGAKVIAMTSMKH 146 (243)
T ss_dssp TTCEEEEECSSCCSHHHHHHHHHHHH-HTCEEEEEECHHH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 3479999999999866543 33 3589999999864
No 440
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=20.85 E-value=2e+02 Score=25.26 Aligned_cols=56 Identities=11% Similarity=0.127 Sum_probs=34.5
Q ss_pred CCcceEEEeccCHHHHhcHHHHHh-----------hcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEE
Q 024709 4 LVNIAVIAKIESIDSLKNLNEIIL-----------ASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVA 69 (264)
Q Consensus 4 ~~~~~iiakIE~~~~~~n~~eI~~-----------~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~a 69 (264)
|-++.|.+--+.....+|+++++. -.|.|+-+ -+-+.....+-+.|.++|||.+.+
T Consensus 102 NP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~----------~Dn~~~R~~in~~c~~~~~Pli~~ 168 (292)
T 3h8v_A 102 NPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSC----------VDNFEARMTINTACNELGQTWMES 168 (292)
T ss_dssp CTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEEC----------CSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEEC----------CcchhhhhHHHHHHHHhCCCEEEe
Confidence 344555554444444567777653 34555433 233455677899999999999853
No 441
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=20.80 E-value=1.2e+02 Score=27.17 Aligned_cols=51 Identities=18% Similarity=0.083 Sum_probs=30.4
Q ss_pred HHHHhcHHHHHhh--cceeeecCCCcccCCCCC--ChHHHHHHHHHHHHHhCCCEEE
Q 024709 16 IDSLKNLNEIILA--SDGAMVARGDLGAQVPLE--QVPSIQEKIVQLCRQLNKPVIV 68 (264)
Q Consensus 16 ~~~~~n~~eI~~~--~Dgi~i~rgdL~~~~~~~--~v~~~qk~ii~~~~~~gkpv~~ 68 (264)
..+++++-+++.. .|.|+++ |||--+-+.+ +-...-.+.+.+.... .|+++
T Consensus 29 ~~~l~~l~~~~~~~~~D~vlia-GDl~hd~~~~~~~~~~~~~~~l~~l~~~-~~v~~ 83 (379)
T 3tho_B 29 KKALDKVVEEAEKREVDLILLT-GDLLHSRNNPSVVALHDLLDYLKRMMRT-APVVV 83 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEC-SCCBSCSSSCCHHHHHHHHHHHHHHHHH-SCEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEC-CCccccCCCCCHHHHHHHHHHHHHHHhC-CCEEE
Confidence 3455666555543 8999997 9996233322 2223334555566666 88887
No 442
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=20.76 E-value=1.5e+02 Score=24.53 Aligned_cols=43 Identities=19% Similarity=0.250 Sum_probs=30.0
Q ss_pred HhcHHHHHhh-cceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhh
Q 024709 19 LKNLNEIILA-SDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQ 71 (264)
Q Consensus 19 ~~n~~eI~~~-~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq 71 (264)
.+.++.++.- .|||++.+.|. ..+ ...++++++.|.|+++...
T Consensus 51 ~~~i~~l~~~~vdgiii~~~~~------~~~----~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 51 VQFIESALATYPSGIATTIPSD------TAF----SKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHHHHHHTCCSEEEECCCCS------STT----HHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHHHcCCCEEEEeCCCH------HHH----HHHHHHHHHCCCCEEEEcC
Confidence 4556666666 99999976553 222 3457788999999998543
No 443
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=20.73 E-value=1.7e+02 Score=26.49 Aligned_cols=82 Identities=18% Similarity=0.349 Sum_probs=43.4
Q ss_pred ceEEEe-ccCHHHHhcHHHHHhh-cceeeecC-CCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCC
Q 024709 7 IAVIAK-IESIDSLKNLNEIILA-SDGAMVAR-GDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPT 83 (264)
Q Consensus 7 ~~iiak-IE~~~~~~n~~eI~~~-~Dgi~i~r-gdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~pt 83 (264)
+.|+.| +-+ .+......+. +|+|.|+- |.-..+.+.+.+ ...+++. ...+.|+|.... .-
T Consensus 226 ~Pv~vkgv~t---~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~-~~l~~v~---~~~~~pVia~GG---------I~- 288 (380)
T 1p4c_A 226 HKLLVKGLLS---AEDADRCIAEGADGVILSNHGGRQLDCAISPM-EVLAQSV---AKTGKPVLIDSG---------FR- 288 (380)
T ss_dssp SEEEEEEECC---HHHHHHHHHTTCSEEEECCGGGTSCTTCCCGG-GTHHHHH---HHHCSCEEECSS---------CC-
T ss_pred CCEEEEecCc---HHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHH-HHHHHHH---HHcCCeEEEECC---------CC-
Confidence 456666 222 2333444444 89999931 111112222221 1222222 234669987432 11
Q ss_pred hHHHHHHHHHHHhccccccccccc
Q 024709 84 RAEVADVSELVRQQADALMLSGES 107 (264)
Q Consensus 84 rae~~dv~~~v~~g~d~~~ls~et 107 (264)
-..|+..++..|+|+|++..--
T Consensus 289 --~~~dv~kal~~GAdaV~iGr~~ 310 (380)
T 1p4c_A 289 --RGSDIVKALALGAEAVLLGRAT 310 (380)
T ss_dssp --SHHHHHHHHHTTCSCEEESHHH
T ss_pred --CHHHHHHHHHhCCcHhhehHHH
Confidence 2358899999999999997543
No 444
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=20.70 E-value=1.7e+02 Score=27.66 Aligned_cols=96 Identities=14% Similarity=0.238 Sum_probs=55.1
Q ss_pred HHhcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHH-HHHHHhCCCEEEEhhhhhhhhhCCCCChHHH-HHHHHHHH
Q 024709 18 SLKNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIV-QLCRQLNKPVIVASQLLESMIEYPIPTRAEV-ADVSELVR 95 (264)
Q Consensus 18 ~~~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii-~~~~~~gkpv~~atq~leSM~~~~~ptrae~-~dv~~~v~ 95 (264)
--++-.-.++.+||+++=||-+|. +++++++-.+.- ..-+.++||+++-. + |.-..- ....+++.
T Consensus 235 m~eRK~~mv~~SDAfIaLPGG~GT---LeELfEaLT~~QLg~~k~~~kPVVLlg---------~-~n~~gywd~Ll~~l~ 301 (460)
T 3bq9_A 235 IEKRLEAFVRCAHGIVIFPGGAGT---AEELLYLLGILMHPDNQRQSLPVILTG---------P-ASSRDYFEALDEFIG 301 (460)
T ss_dssp HHHHHHHHHHHCSEEEECSCSHHH---HHHHHHHHHHHTSGGGTTCCCCEEEEE---------C-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEEcCCCcch---HHHHHHHHHHHhhccccCCCCCEEEEe---------c-CCccchhhHHHHHHH
Confidence 344556677889999999998875 466766665432 22234799999842 1 110110 11111211
Q ss_pred h------ccccccccccccCCCChHHHHHHHHHHHHHHHhhhh
Q 024709 96 Q------QADALMLSGESAMGQFPDKALAVLRSVSLRIEKWCR 132 (264)
Q Consensus 96 ~------g~d~~~ls~eta~G~yP~eav~~m~~i~~~~E~~~~ 132 (264)
. -.+.+.. -.-|.|+++.|.+.+..+..+++
T Consensus 302 ~~l~~~~~~~~iiv------~ddpeEal~~l~~~~~~v~~~y~ 338 (460)
T 3bq9_A 302 ATIGDEARQLYKII------IDDPAAVAQHMHAGMAAVKQYRR 338 (460)
T ss_dssp HHTCTTGGGGCEEE------ESCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcchhhcCcEEE------eCCHHHHHHHHHHHHHHHHHHhc
Confidence 1 1111112 23499999999998888777554
No 445
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=20.53 E-value=66 Score=29.18 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=37.0
Q ss_pred hcHHHHHhhcceeeecCCCcccCCCCCChHHHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHH
Q 024709 20 KNLNEIILASDGAMVARGDLGAQVPLEQVPSIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRAEVADVSELVR 95 (264)
Q Consensus 20 ~n~~eI~~~~Dgi~i~rgdL~~~~~~~~v~~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~ 95 (264)
.+++++++-.|.+.|+ +|..--...--++..+|-++||+|++ +.|. +..|..++..+..
T Consensus 58 ~~~~~l~~~~D~v~i~-------~p~~~h~~~~~~~a~~al~aGkhVl~---------EKPl-~~~ea~~l~~~A~ 116 (372)
T 4gmf_A 58 TSPEQITGMPDIACIV-------VRSTVAGGAGTQLARHFLARGVHVIQ---------EHPL-HPDDISSLQTLAQ 116 (372)
T ss_dssp SSGGGCCSCCSEEEEC-------CC--CTTSHHHHHHHHHHHTTCEEEE---------ESCC-CHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCEEEEE-------CCCcccchhHHHHHHHHHHcCCcEEE---------ecCC-CHHHHHHHHHHHH
Confidence 4556666667777774 22221111224678889999999997 7785 7778766665433
No 446
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=20.49 E-value=1.2e+02 Score=26.25 Aligned_cols=49 Identities=16% Similarity=0.091 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHh-CCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHh-ccccccccc
Q 024709 49 PSIQEKIVQLCRQL-NKPVIVASQLLESMIEYPIPTRAEVADVSELVRQ-QADALMLSG 105 (264)
Q Consensus 49 ~~~qk~ii~~~~~~-gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~-g~d~~~ls~ 105 (264)
++.-.++++..++. ++|+++ ...+..+..+..+++....+ |+|++.+++
T Consensus 143 ~e~~~~iv~~vr~~~~~Pv~v--------Ki~~~~~~~~~~~~a~~~~~~G~d~i~v~~ 193 (311)
T 1jub_A 143 FEATEKLLKEVFTFFTKPLGV--------KLPPYFDLVHFDIMAEILNQFPLTYVNSVN 193 (311)
T ss_dssp HHHHHHHHHHHTTTCCSCEEE--------EECCCCSHHHHHHHHHHHTTSCCCEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCEEE--------EECCCCCHHHHHHHHHHHHHcCCcEEEecC
No 447
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=20.42 E-value=2.1e+02 Score=20.79 Aligned_cols=75 Identities=15% Similarity=0.088 Sum_probs=38.4
Q ss_pred HHHh-cCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHHHH
Q 024709 164 IANK-LKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFSLL 236 (264)
Q Consensus 164 lA~~-l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~~~ 236 (264)
...+ ...+.|++-.. +|. ..+.+.+..|.+||+.+|....... .-.+..|+.-++..+ .+.++ +..++..+
T Consensus 44 ~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp-~~~~~-L~~~l~~~ 121 (154)
T 2qsj_A 44 FLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFIPKS-ADPQV-LIHAVSLI 121 (154)
T ss_dssp HHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBBCCTT-SCHHH-HHHHHHHH
T ss_pred HHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEEEeCC-CCHHH-HHHHHHHH
Confidence 3344 56776666432 333 3556666679999999998754222 123456777666543 34444 34455555
Q ss_pred HHcC
Q 024709 237 KARG 240 (264)
Q Consensus 237 ~~~g 240 (264)
...+
T Consensus 122 ~~~~ 125 (154)
T 2qsj_A 122 LEGE 125 (154)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 5443
No 448
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=20.27 E-value=3.8e+02 Score=23.48 Aligned_cols=9 Identities=11% Similarity=0.088 Sum_probs=6.0
Q ss_pred CCEEEEEec
Q 024709 245 GDLIIVVSD 253 (264)
Q Consensus 245 GD~VVvvsG 253 (264)
-|.|++-.|
T Consensus 181 ~d~vvvpvG 189 (352)
T 2zsj_A 181 PDYHFIPVG 189 (352)
T ss_dssp CSEEEEECS
T ss_pred CCEEEEeCC
Confidence 377777666
No 449
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=20.25 E-value=90 Score=26.28 Aligned_cols=46 Identities=17% Similarity=0.098 Sum_probs=30.0
Q ss_pred hCCCEEEEhhhhhhhhhCCCCChHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHH
Q 024709 62 LNKPVIVASQLLESMIEYPIPTRAEVADVSELVRQQADALMLSGESAMGQFPDKALAVLRS 122 (264)
Q Consensus 62 ~gkpv~~atq~leSM~~~~~ptrae~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~~ 122 (264)
.+.|++... ..-|. .|+..+...|+|+++.. ++..+ |-...+.+.+
T Consensus 180 ~~ipvIA~G---------GI~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~f~~ 225 (229)
T 3q58_A 180 AGCRVIAEG---------RYNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQWFSH 225 (229)
T ss_dssp TTCCEEEES---------SCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred cCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHHHHH
Confidence 389999744 33333 35677788899999997 44444 6555555443
No 450
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=20.25 E-value=1.3e+02 Score=26.10 Aligned_cols=57 Identities=7% Similarity=0.147 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEhhhhhhhhhCCCCChH-----HHHHHHHHHHhccccccccccccCCCChHHHHHHHH
Q 024709 50 SIQEKIVQLCRQLNKPVIVASQLLESMIEYPIPTRA-----EVADVSELVRQQADALMLSGESAMGQFPDKALAVLR 121 (264)
Q Consensus 50 ~~qk~ii~~~~~~gkpv~~atq~leSM~~~~~ptra-----e~~dv~~~v~~g~d~~~ls~eta~G~yP~eav~~m~ 121 (264)
..-+.++++|+++|+.|.+=| +. .|... ...+....+..|+|++.- +||..+.+.++
T Consensus 215 ~~~~~~V~~ah~~G~~V~vWT------v~--t~d~~~~~~~~~~~~~~L~~~GVDgIiT-------D~P~~l~~~L~ 276 (292)
T 3mz2_A 215 PEVREVIDMLHERGVMCMIST------AP--SDDKLSTPESRAEAYRMIIRQGVDIIES-------DRPIEVAEAIS 276 (292)
T ss_dssp HHHHHHHHHHHHTTBCEEEEC------TT--TGGGSSSHHHHHHHHHHHHHTTCCEEEE-------SCHHHHHHHHG
T ss_pred ccCHHHHHHHHHCCCEEEEEe------CC--CcchhhhccccHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 345789999999999999855 11 22111 123556778899999876 48988777765
No 451
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.08 E-value=2.4e+02 Score=20.00 Aligned_cols=76 Identities=14% Similarity=0.167 Sum_probs=43.0
Q ss_pred HHHHHHhcCCcEEEEEcCCch----HHHHHhhcCCCCcEEEEcCChhhhh-hcccccccEEEEecCCCCHHHHHHHHHHH
Q 024709 161 AAKIANKLKASALFVYTKTGQ----MASLLSRSRPDCPIFAFAPMSSVRR-RLNLQWGLVPFCLNFSDDMESNLNQTFSL 235 (264)
Q Consensus 161 Av~lA~~l~A~aIVv~T~sG~----tA~~iSr~RP~~PIiAvT~~~~~aR-~L~L~~GV~P~~~~~~~~~e~~i~~al~~ 235 (264)
+.....+.+.+.|++-...|. ..+.+.+..|.+||+.+|....... .-.+-.|+.-++..+. +.++ +..+++.
T Consensus 40 a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~-~~~~-l~~~i~~ 117 (142)
T 2qxy_A 40 AFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKPF-RLDY-LLERVKK 117 (142)
T ss_dssp HHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESSC-CHHH-HHHHHHH
T ss_pred HHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCCC-CHHH-HHHHHHH
Confidence 334445567787776542222 2445555678999999998754322 2245567777766543 3444 3344444
Q ss_pred HHH
Q 024709 236 LKA 238 (264)
Q Consensus 236 ~~~ 238 (264)
+..
T Consensus 118 ~~~ 120 (142)
T 2qxy_A 118 IIS 120 (142)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 452
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=20.03 E-value=99 Score=22.15 Aligned_cols=60 Identities=7% Similarity=0.001 Sum_probs=37.0
Q ss_pred cCCcEEEEEcC----Cch-HHHHHhhcCCCCcEEEEcCChhhhhh-cccccccEEEEecCCCCHHHH
Q 024709 168 LKASALFVYTK----TGQ-MASLLSRSRPDCPIFAFAPMSSVRRR-LNLQWGLVPFCLNFSDDMESN 228 (264)
Q Consensus 168 l~A~aIVv~T~----sG~-tA~~iSr~RP~~PIiAvT~~~~~aR~-L~L~~GV~P~~~~~~~~~e~~ 228 (264)
.+.+.|++-.. +|. ..+.+.+..|.+||+.+|........ -.+..|+.-++.++. +.++.
T Consensus 58 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~-~~~~L 123 (135)
T 3snk_A 58 TRPGIVILDLGGGDLLGKPGIVEARALWATVPLIAVSDELTSEQTRVLVRMNASDWLHKPL-DGKEL 123 (135)
T ss_dssp CCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSC-CHHHH
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHHcCcHhhccCCC-CHHHH
Confidence 34566665432 232 46677777789999999986653322 246678888877643 44443
Done!