BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024710
(264 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255539324|ref|XP_002510727.1| conserved hypothetical protein [Ricinus communis]
gi|223551428|gb|EEF52914.1| conserved hypothetical protein [Ricinus communis]
Length = 264
Score = 330 bits (845), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 165/253 (65%), Positives = 198/253 (78%), Gaps = 11/253 (4%)
Query: 15 SPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQEDDAR--TLNRFRIEEQDDD 72
+PLH +P+ +F + S + N +KQ + CC ++D RFR++E
Sbjct: 20 TPLHLL--KPN-LNFLSASPSFRFNSCRKQHLPCCTNSFPDEDQHQPLFCRFRLQEP--- 73
Query: 73 SRTKRREVMFQLAFT-ACSFPAIVSYALAANEDLRVYTDELNKFEISIPQDWQLGAGEPN 131
RRE +F +AFT +FP ++S A A +D R+YTD+ NKF+ISIPQDW++GAGEPN
Sbjct: 74 --YGRREALFSVAFTTGFTFPGLISNAFAEIDDFRLYTDDANKFQISIPQDWRVGAGEPN 131
Query: 132 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 191
GFKS+TAFYP+EAS SSVSVVITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+RPPGVA
Sbjct: 132 GFKSVTAFYPEEASGSSVSVVITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQRPPGVA 191
Query: 192 AKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYG 251
AKLIDCKA+KG YYIEYTLQNPGE RKHLFSA+GMA NGWYNRLYTVTGQFVEEESE YG
Sbjct: 192 AKLIDCKATKGIYYIEYTLQNPGEGRKHLFSALGMAFNGWYNRLYTVTGQFVEEESENYG 251
Query: 252 SNIEKAVASFRFI 264
S ++K V+SF+FI
Sbjct: 252 SKVQKVVSSFKFI 264
>gi|225457650|ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3, chloroplastic [Vitis
vinifera]
gi|297745601|emb|CBI40766.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/262 (61%), Positives = 198/262 (75%), Gaps = 17/262 (6%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQY-----KKQFVFCCKKQEQEDDARTLNRFR 65
MA PL R F+A+S+ KG KKQ V CK + +E++ + F
Sbjct: 1 MALYFPLPL---RSGSCDFSAYSSKKGYGSRTGKCGKKQRVVFCKNENKEEEKTS---FG 54
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELNKFEISIPQD 122
I+EQ R REV+ Q+ F+ S AIV ALA ED +VY+DE+NKF+I IPQD
Sbjct: 55 IKEQHGGGR---REVVLQMVFSTISLQAIVPNALADTEVPEDFKVYSDEVNKFKIQIPQD 111
Query: 123 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 182
WQ+G+GEP+GFKS+TAFYP+EAS S+VSVVITGLG DFTR+ESFGKV+AFA+ LV+GLDR
Sbjct: 112 WQVGSGEPSGFKSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDR 171
Query: 183 SWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 242
SW+RPPG+AAKLIDC+A+ GFYYIEY LQNPGESR+HLFSA+GMA+NGWYNRLYTVTGQ+
Sbjct: 172 SWQRPPGIAAKLIDCRAANGFYYIEYWLQNPGESRRHLFSAVGMANNGWYNRLYTVTGQY 231
Query: 243 VEEESEKYGSNIEKAVASFRFI 264
+EEESEK+ S IEK VASFRFI
Sbjct: 232 LEEESEKFSSKIEKVVASFRFI 253
>gi|449458059|ref|XP_004146765.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Cucumis sativus]
Length = 257
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/196 (73%), Positives = 164/196 (83%), Gaps = 4/196 (2%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAAN----EDLRVYTDELNKFEISIPQDWQLGAG 128
S RRE+M + FTA SF + S ALA + ED R YTDE NKF + IPQDWQ+G G
Sbjct: 62 SGVNRREIMLGIGFTAFSFQEVGSNALAESVVVAEDYRTYTDEANKFSLVIPQDWQVGNG 121
Query: 129 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 188
EPNGFKS+TAF+PQE S+S+VSVVI+GLGPD+TRMESFGKVE FADTLVSGLDRSW+RPP
Sbjct: 122 EPNGFKSVTAFFPQETSTSNVSVVISGLGPDYTRMESFGKVEEFADTLVSGLDRSWKRPP 181
Query: 189 GVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESE 248
GVAAKLIDC++SKG YYIEYTLQNPGESRKHL+SAIGM+SNGWYNRLYT+TGQ+ +EESE
Sbjct: 182 GVAAKLIDCRSSKGIYYIEYTLQNPGESRKHLYSAIGMSSNGWYNRLYTITGQYADEESE 241
Query: 249 KYGSNIEKAVASFRFI 264
Y S IEK V SF FI
Sbjct: 242 SYSSKIEKVVNSFAFI 257
>gi|188509930|gb|ACD56619.1| unknown predicted protein [Gossypioides kirkii]
Length = 274
Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 150/199 (75%), Positives = 169/199 (84%), Gaps = 9/199 (4%)
Query: 67 EEQDDD---SRTKRREVMFQLAFTACSFP-AIVSYALAANE-----DLRVYTDELNKFEI 117
E ++DD + T+RR+ + Q A SFP I+S A+A E D RVYTDE NKF+I
Sbjct: 46 EMKEDDGHATSTRRRQFILQAPLIAFSFPQLIMSTAIAVAEIDVPQDFRVYTDEQNKFKI 105
Query: 118 SIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLV 177
IPQDWQ+GAGEPN FKSITAFYP+E ++S+VSV ITGLGPDFTRMESFGKV+AFADTLV
Sbjct: 106 FIPQDWQVGAGEPNNFKSITAFYPEEEANSNVSVAITGLGPDFTRMESFGKVDAFADTLV 165
Query: 178 SGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYT 237
SGLDRSW+RPPGVAAKLIDCKA+ GFYYIEYTLQNPGESR+HLFSAIGMASNGWYNRLYT
Sbjct: 166 SGLDRSWQRPPGVAAKLIDCKAANGFYYIEYTLQNPGESRRHLFSAIGMASNGWYNRLYT 225
Query: 238 VTGQFVEEESEKYGSNIEK 256
VTGQFVEEE+EKYGS IEK
Sbjct: 226 VTGQFVEEEAEKYGSRIEK 244
>gi|147809819|emb|CAN64877.1| hypothetical protein VITISV_030793 [Vitis vinifera]
Length = 247
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/255 (60%), Positives = 191/255 (74%), Gaps = 17/255 (6%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQY-----KKQFVFCCKKQEQEDDARTLNRFR 65
MA PL R F+A+S+ KG KKQ V CK + +E++ + F
Sbjct: 1 MALYFPLPL---RSGSCDFSAYSSKKGCGSRTGKCGKKQRVVFCKNENKEEEKTS---FG 54
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELNKFEISIPQD 122
I+EQ R REV+ Q+ F+ S AIV ALA ED +VY+DE+NKF+I IPQD
Sbjct: 55 IKEQHGGGR---REVVLQIVFSTISLQAIVPNALADTEVPEDFKVYSDEVNKFKIQIPQD 111
Query: 123 WQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 182
WQ+G+GEP+GFKS+TAFYP+EAS S+VSVVITGLG DFTR+ESFGKV+AFA+ LV+GLDR
Sbjct: 112 WQVGSGEPSGFKSVTAFYPEEASGSNVSVVITGLGADFTRLESFGKVDAFAENLVNGLDR 171
Query: 183 SWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 242
SW+RPPG+AAKLIDC+A+ GFYYIEY LQNPGESR+HLFSA+GMA+NGWYNRLYTVTGQ+
Sbjct: 172 SWQRPPGIAAKLIDCRAANGFYYIEYWLQNPGESRRHLFSAVGMANNGWYNRLYTVTGQY 231
Query: 243 VEEESEKYGSNIEKA 257
+EEESEK+ S IEK
Sbjct: 232 LEEESEKFSSKIEKV 246
>gi|21537211|gb|AAM61552.1| thylakoid lumen protein, chloroplast precursor [Arabidopsis
thaliana]
Length = 247
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 159/259 (61%), Positives = 186/259 (71%), Gaps = 17/259 (6%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQED--DARTLNRFRIEE 68
MA+ISP W P +FSN + T ++ C D+ + RI
Sbjct: 1 MAAISP---WLSSPQ-----SFSNPRVTITDSRR---CSSISAAISVLDSSNEEQHRISS 49
Query: 69 QDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELNKFEISIPQDWQL 125
+D KRR+VM Q+A + P +S A A A+E RVYTDE NKFEISIPQDWQ+
Sbjct: 50 RDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQDWQV 108
Query: 126 GAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWR 185
G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+
Sbjct: 109 GQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQ 168
Query: 186 RPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEE 245
+P GV AKLID +ASKGFYYIEYTLQNPGE+RKHL+SAIGMA+NGWYNRLYTVTGQF +E
Sbjct: 169 KPVGVTAKLIDSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDE 228
Query: 246 ESEKYGSNIEKAVASFRFI 264
ES + S I+K V SFRFI
Sbjct: 229 ESSEQSSKIQKTVKSFRFI 247
>gi|18411110|ref|NP_565131.1| PsbP domain-containing protein 3 [Arabidopsis thaliana]
gi|18203439|sp|Q9S720.2|PPD3_ARATH RecName: Full=PsbP domain-containing protein 3, chloroplastic;
AltName: Full=OEC23-like protein 2; Flags: Precursor
gi|32815945|gb|AAP88357.1| At1g76450 [Arabidopsis thaliana]
gi|110742837|dbj|BAE99317.1| hypothetical protein [Arabidopsis thaliana]
gi|332197723|gb|AEE35844.1| PsbP domain-containing protein 3 [Arabidopsis thaliana]
Length = 247
Score = 303 bits (775), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 159/259 (61%), Positives = 186/259 (71%), Gaps = 17/259 (6%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQED--DARTLNRFRIEE 68
MA+ISP W P +FSN + T ++ C D+ + RI
Sbjct: 1 MAAISP---WLSSPQ-----SFSNPRVTITDSRR---CSSISAAISVLDSSNEEQHRISS 49
Query: 69 QDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELNKFEISIPQDWQL 125
+D KRR+VM Q+A + P +S A A A+E RVYTDE NKFEISIPQDWQ+
Sbjct: 50 RDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQDWQV 108
Query: 126 GAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWR 185
G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+
Sbjct: 109 GQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQ 168
Query: 186 RPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEE 245
+P GV AKLID +ASKGFYYIEYTLQNPGE+RKHL+SAIGMA+NGWYNRLYTVTGQF +E
Sbjct: 169 KPVGVTAKLIDSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDE 228
Query: 246 ESEKYGSNIEKAVASFRFI 264
ES + S I+K V SFRFI
Sbjct: 229 ESAEQSSKIQKTVKSFRFI 247
>gi|224083366|ref|XP_002306998.1| predicted protein [Populus trichocarpa]
gi|222856447|gb|EEE93994.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/185 (76%), Positives = 163/185 (88%), Gaps = 3/185 (1%)
Query: 75 TKRREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPN 131
TKRRE +F + FTA +FPAI S ALAA ED RVYTD+ NKF+ISIPQ WQ+GAGEP+
Sbjct: 2 TKRREALFNMVFTAFTFPAIASTALAATGVAEDSRVYTDDANKFKISIPQGWQVGAGEPS 61
Query: 132 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 191
G+KS+TAFYP+EAS+SSVSVVITGLGPDFTR+ESFGKV+AFA+TLV GLDRSW+RPPGVA
Sbjct: 62 GYKSVTAFYPEEASNSSVSVVITGLGPDFTRLESFGKVDAFAETLVGGLDRSWQRPPGVA 121
Query: 192 AKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYG 251
AKLID KA+ G YYIEYTLQNPGESR+HL SA+G+ NGWYNRLYTVTGQFV+EESEK+G
Sbjct: 122 AKLIDSKAANGLYYIEYTLQNPGESRRHLLSALGVTFNGWYNRLYTVTGQFVDEESEKFG 181
Query: 252 SNIEK 256
+ I K
Sbjct: 182 TEIRK 186
>gi|449522159|ref|XP_004168095.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Cucumis sativus]
Length = 188
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/188 (75%), Positives = 160/188 (85%), Gaps = 4/188 (2%)
Query: 81 MFQLAFTACSFPAIVSYALAAN----EDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSI 136
M + FTA SF +VS ALA + ED R YTDE NKF + IPQDWQ+G GEPNGFKS+
Sbjct: 1 MLGIGFTAFSFQEVVSNALAESVVVAEDYRTYTDEANKFSLVIPQDWQVGNGEPNGFKSV 60
Query: 137 TAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLID 196
TAF+PQE S+S+VSVVI+GLGPD+TRMESFGKVE FADTLVSGLDRSW+RPPGVAAKLID
Sbjct: 61 TAFFPQETSTSNVSVVISGLGPDYTRMESFGKVEEFADTLVSGLDRSWKRPPGVAAKLID 120
Query: 197 CKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEK 256
C++SKG YYIEYTLQNPGESRKHL+SAIGM+SNGWYNRLYT+TGQ+ +EESE Y S IEK
Sbjct: 121 CRSSKGIYYIEYTLQNPGESRKHLYSAIGMSSNGWYNRLYTITGQYADEESESYSSKIEK 180
Query: 257 AVASFRFI 264
V SF FI
Sbjct: 181 VVNSFAFI 188
>gi|297839519|ref|XP_002887641.1| hypothetical protein ARALYDRAFT_476802 [Arabidopsis lyrata subsp.
lyrata]
gi|297333482|gb|EFH63900.1| hypothetical protein ARALYDRAFT_476802 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/212 (69%), Positives = 168/212 (79%), Gaps = 5/212 (2%)
Query: 57 DARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELN 113
D+ + RI +D KRRE M Q+A + P VS A A A+E RVYTDE N
Sbjct: 15 DSSNEEQHRISSRDHVG-IKRREAMLQIASSVFFLPLAVSPAFAETNASEAFRVYTDEAN 73
Query: 114 KFEISIPQ-DWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAF 172
KFEISIPQ DWQ+G EPNGFKSITAFYPQE S+S+VS+ ITGLGPDFTRMESFGKVEAF
Sbjct: 74 KFEISIPQEDWQVGQAEPNGFKSITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAF 133
Query: 173 ADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWY 232
A+TLVSGLDRSW++P GV AKLID ++SKGFYYIEYTLQNPGE+RKHL+SAIGMA+NGWY
Sbjct: 134 AETLVSGLDRSWQKPAGVTAKLIDSRSSKGFYYIEYTLQNPGEARKHLYSAIGMATNGWY 193
Query: 233 NRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 264
NRLYTVTGQF +EES + S I+K V SFRFI
Sbjct: 194 NRLYTVTGQFTDEESAEQSSKIQKTVKSFRFI 225
>gi|388521577|gb|AFK48850.1| unknown [Lotus japonicus]
Length = 250
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/264 (56%), Positives = 187/264 (70%), Gaps = 24/264 (9%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKG------TNQYKKQFVFCCKKQEQEDDARTLNRF 64
MASIS RP + TA + +KG +KK + ++ +NR
Sbjct: 1 MASISWSCCLRWRPTISDRTASAADKGFSPPITLEHHKKTPCLLSARNSSIEEGHAVNR- 59
Query: 65 RIEEQDDDSRTKRREVMFQLAFTA-CSFPAIVSYALAAN---EDLRVYTDELNKFEISIP 120
R+++F + A + P+ V ALA N ED+R+Y D+ NKF+I IP
Sbjct: 60 -------------RQLVFYTSLAAFAAAPSTVLKALALNDVVEDVRIYIDDENKFKIEIP 106
Query: 121 QDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGL 180
QDW++G G+ +GFKS+TAFYP+EASSS+VSV ITGLGPDFT+MESFGKV+ FA+TLVSGL
Sbjct: 107 QDWEVGTGDSSGFKSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGL 166
Query: 181 DRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTG 240
DRSWR+PPGVAAKLI+ K SKG YYIEY+LQNPGESR+HL+SAIGMA+NGWYNRLYTVTG
Sbjct: 167 DRSWRKPPGVAAKLINSKPSKGIYYIEYSLQNPGESRRHLYSAIGMATNGWYNRLYTVTG 226
Query: 241 QFVEEESEKYGSNIEKAVASFRFI 264
Q+VEEE++KY S I+KAV SF+FI
Sbjct: 227 QYVEEETDKYASEIQKAVTSFKFI 250
>gi|357467179|ref|XP_003603874.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492922|gb|AES74125.1| PsbP domain-containing protein [Medicago truncatula]
Length = 241
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 132/191 (69%), Positives = 161/191 (84%), Gaps = 3/191 (1%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNGF 133
RR+++ + A + + S ALA N ED +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 193
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 194 LIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 253
LIDCK+SKGFY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ+ EEE++KY S
Sbjct: 171 LIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASK 230
Query: 254 IEKAVASFRFI 264
I+KAV SF+FI
Sbjct: 231 IQKAVRSFKFI 241
>gi|388507848|gb|AFK41990.1| unknown [Medicago truncatula]
Length = 241
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/191 (68%), Positives = 160/191 (83%), Gaps = 3/191 (1%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNGF 133
RR+++ + A + + S ALA N ED +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILHTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 193
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 194 LIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 253
LIDCK+SKGFY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ+ EEE++KY S
Sbjct: 171 LIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASK 230
Query: 254 IEKAVASFRFI 264
I+K V SF+FI
Sbjct: 231 IQKTVRSFKFI 241
>gi|356508481|ref|XP_003522985.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Glycine max]
Length = 244
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 137/193 (70%), Positives = 161/193 (83%), Gaps = 7/193 (3%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAG--EPN 131
RR+++ +F V ALA N ED+RVYTD+ NKF+I IPQ+WQ+G G E +
Sbjct: 54 RRQLILHTPVAVAAFA--VPNALALNDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGESS 111
Query: 132 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 191
GFKSITAFYP AS+S+VSVVITGLGPDFTRMESFGKV+ FA TLVSGLDRSWR+PPGVA
Sbjct: 112 GFKSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVA 171
Query: 192 AKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYG 251
AKLIDCK+S G YYIEY+LQNPGESR++L+SAIGMASNGWYNRLYTVTGQ+VEEE++KY
Sbjct: 172 AKLIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKYA 231
Query: 252 SNIEKAVASFRFI 264
S ++K VASFRFI
Sbjct: 232 SKVQKVVASFRFI 244
>gi|255646871|gb|ACU23906.1| unknown [Glycine max]
Length = 244
Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/193 (70%), Positives = 160/193 (82%), Gaps = 7/193 (3%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAG--EPN 131
RR+++ +F V ALA N ED+RVYTD+ NKF+I IPQ+WQ+G G E +
Sbjct: 54 RRQLILHTPVAVAAF--AVPNALALNDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGESS 111
Query: 132 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA 191
GFKSITAFYP AS+S+VSVVITG GPDFTRMESFGKV+ FA TLVSGLDRSWR+PPGVA
Sbjct: 112 GFKSITAFYPTVASNSNVSVVITGPGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGVA 171
Query: 192 AKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYG 251
AKLIDCK+S G YYIEY+LQNPGESR++L+SAIGMASNGWYNRLYTVTGQ+VEEE++KY
Sbjct: 172 AKLIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKYA 231
Query: 252 SNIEKAVASFRFI 264
S ++K VASFRFI
Sbjct: 232 SKVQKVVASFRFI 244
>gi|388515155|gb|AFK45639.1| unknown [Medicago truncatula]
Length = 241
Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 130/191 (68%), Positives = 159/191 (83%), Gaps = 3/191 (1%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNGF 133
RR+++ + A + + S ALA N ED +Y D+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYADDENKFKIDIPQEWQIGTGESAGF 110
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 193
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 194 LIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 253
LIDCK+SKGFY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ+ EEE++KY S
Sbjct: 171 LIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASK 230
Query: 254 IEKAVASFRFI 264
I+KAV SF+ I
Sbjct: 231 IQKAVRSFKLI 241
>gi|356517170|ref|XP_003527262.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Glycine max]
Length = 248
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/202 (66%), Positives = 167/202 (82%), Gaps = 3/202 (1%)
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALA-ANEDLRVYTDELNKFEISIPQDWQ 124
IEE++ + +R+ ++ A +F + AL +ED+RVYTD+ NKF+I IP++WQ
Sbjct: 47 IEEEEGRAVNRRQLILHTPVAAAAAFAVPNALALNDVSEDVRVYTDDENKFKIEIPEEWQ 106
Query: 125 LGAG--EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 182
+G G E +GFKSITAFYP +AS+S+VSVVITGLGPDFTRMESFGKV+ FA TLVSGLDR
Sbjct: 107 VGTGDGESSGFKSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDR 166
Query: 183 SWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQF 242
SWR+PPGVAAKLIDCK+S G YYIEY LQNPGESR++L+SAIGMASNGWYNRLYTVTGQ+
Sbjct: 167 SWRKPPGVAAKLIDCKSSNGIYYIEYLLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQY 226
Query: 243 VEEESEKYGSNIEKAVASFRFI 264
VEE+++KY S ++K VASFRFI
Sbjct: 227 VEEDTDKYASKVQKVVASFRFI 248
>gi|357467177|ref|XP_003603873.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492921|gb|AES74124.1| PsbP domain-containing protein [Medicago truncatula]
Length = 253
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 161/203 (79%), Gaps = 15/203 (7%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNGF 133
RR+++ + A + + S ALA N ED +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAK 193
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLVSGLDRSW++PPGVAAK
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAK 170
Query: 194 LIDCKASK------------GFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQ 241
LIDCK+SK GFY+IEYTLQ+PGE RKHL+SAIGM +NGWYNRLYTVTGQ
Sbjct: 171 LIDCKSSKVLTASLPRKNGSGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQ 230
Query: 242 FVEEESEKYGSNIEKAVASFRFI 264
+ EEE++KY S I+KAV SF+FI
Sbjct: 231 YGEEETDKYASKIQKAVRSFKFI 253
>gi|115477246|ref|NP_001062219.1| Os08g0512500 [Oryza sativa Japonica Group]
gi|42408803|dbj|BAD10064.1| thylakoid lumen protein, chloroplast precursor-like [Oryza sativa
Japonica Group]
gi|113624188|dbj|BAF24133.1| Os08g0512500 [Oryza sativa Japonica Group]
gi|215686998|dbj|BAG90812.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201441|gb|EEC83868.1| hypothetical protein OsI_29855 [Oryza sativa Indica Group]
gi|222640852|gb|EEE68984.1| hypothetical protein OsJ_27910 [Oryza sativa Japonica Group]
Length = 242
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/163 (68%), Positives = 137/163 (84%), Gaps = 2/163 (1%)
Query: 103 EDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTR 162
E R Y DE NKF I+IPQDW +GAGE +GFKS+TAFYP + + S+VSV ITG+GPDFT
Sbjct: 79 EGFRTYEDEANKFSIAIPQDWLIGAGEVSGFKSVTAFYPDQVADSNVSVAITGIGPDFTS 138
Query: 163 MESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFS 222
++SFG V+AFA+TLV+GLDRSW+RPPGVAAKLI+ +A+ GFYYIEYTLQNPGE R+H+ S
Sbjct: 139 LKSFGDVDAFAETLVNGLDRSWKRPPGVAAKLINSRAANGFYYIEYTLQNPGEQRRHIVS 198
Query: 223 AIGMASNGWYNRLYTVTGQFVEEES--EKYGSNIEKAVASFRF 263
AIGMA NGWYNRLYTVTGQ+++E+ +KY + IEK V SFRF
Sbjct: 199 AIGMAFNGWYNRLYTVTGQYIDEDGDVDKYRAQIEKCVQSFRF 241
>gi|25373339|pir||C96792 unknown protein F14G6.5 [imported] - Arabidopsis thaliana
gi|6554474|gb|AAF16656.1|AC012394_5 unknown protein; 20843-19352 [Arabidopsis thaliana]
gi|12323974|gb|AAG51945.1|AC015450_6 unknown protein; 20920-22411 [Arabidopsis thaliana]
Length = 220
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/259 (53%), Positives = 162/259 (62%), Gaps = 44/259 (16%)
Query: 11 MASISPLHTWSQRPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQED--DARTLNRFRIEE 68
MA+ISP W P +FSN + T ++ C D+ + RI
Sbjct: 1 MAAISP---WLSSPQ-----SFSNPRVTITDSRR---CSSISAAISVLDSSNEEQHRISS 49
Query: 69 QDDDSRTKRREVMFQLAFTACSFPAIVSYALA---ANEDLRVYTDELNKFEISIPQDWQL 125
+D KRR+VM Q+A + P +S A A A+E RVYTDE NKFEISIPQ
Sbjct: 50 RDHVG-MKRRDVMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQ---- 104
Query: 126 GAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWR 185
VS+ ITGLGPDFTRMESFGKVEAFA+TLVSGLDRSW+
Sbjct: 105 -----------------------VSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQ 141
Query: 186 RPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEE 245
+P GV AKLID +ASKGFYYIEYTLQNPGE+RKHL+SAIGMA+NGWYNRLYTVTGQF +E
Sbjct: 142 KPVGVTAKLIDSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDE 201
Query: 246 ESEKYGSNIEKAVASFRFI 264
ES + S I+K V SFRFI
Sbjct: 202 ESAEQSSKIQKTVKSFRFI 220
>gi|226496587|ref|NP_001147730.1| LOC100281340 [Zea mays]
gi|195613364|gb|ACG28512.1| thylakoid lumen protein [Zea mays]
gi|224034069|gb|ACN36110.1| unknown [Zea mays]
gi|414869459|tpg|DAA48016.1| TPA: Thylakoid lumen protein isoform 1 [Zea mays]
gi|414869460|tpg|DAA48017.1| TPA: Thylakoid lumen protein isoform 2 [Zea mays]
Length = 256
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 160/222 (72%), Gaps = 9/222 (4%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIV-SYALA------ANE 103
++ Q+ A T+ R ++ +R ++ + F+A + P + + ALA + E
Sbjct: 34 RRLQQAAATTVCHCRSARVEEGLLGRRDALLLGIVFSAATPPLLAPAGALADEATAESQE 93
Query: 104 DLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTR 162
Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT
Sbjct: 94 GFTTYEDEANKFSIQVPQGWLVGAGEASGIKSVTAFYPEQAATDSNVSVAITGIGPDFTS 153
Query: 163 MESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFS 222
++SFG V+AFA+ LV+GLDRSW+RPPG+AAKLID +A+ G YY+EYTLQNPGE R+H+ S
Sbjct: 154 LKSFGDVDAFAEGLVNGLDRSWQRPPGLAAKLIDSRAANGLYYLEYTLQNPGERRRHIVS 213
Query: 223 AIGMASNGWYNRLYTVTGQFV-EEESEKYGSNIEKAVASFRF 263
AIGMA NGWYNRLYTVTGQ++ +++SEKY IEKAV SFR
Sbjct: 214 AIGMAFNGWYNRLYTVTGQYIDDDDSEKYRPQIEKAVGSFRL 255
>gi|357141874|ref|XP_003572377.1| PREDICTED: psbP domain-containing protein 3, chloroplastic-like
[Brachypodium distachyon]
Length = 352
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 146/197 (74%), Gaps = 9/197 (4%)
Query: 76 KRREVMFQLAFTACSFPAIVS-------YALAANEDLRVYTDELNKFEISIPQDWQLGAG 128
+RR+ + + F+A + + S A E Y DE NKF I +PQ WQ+GAG
Sbjct: 155 RRRDALLGVVFSAGTATLLASPAGALAEAAAEVQEGFSEYQDEANKFSIVVPQGWQMGAG 214
Query: 129 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 188
E +GFK++TAF+P +A+ SSVSVVITG+GPDFT ++SFG V+AFA+ LV+GLDRSW+RP
Sbjct: 215 EGSGFKNVTAFFPDKAADSSVSVVITGIGPDFTSLKSFGDVDAFAENLVTGLDRSWQRPA 274
Query: 189 GVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVE--EE 246
GV AKLID +AS G YYIEYTLQNPG+ R+H+ SAIGMA NGWYNRLYTVTGQ++E EE
Sbjct: 275 GVTAKLIDSRASNGMYYIEYTLQNPGDKRRHIVSAIGMAFNGWYNRLYTVTGQYIEDDEE 334
Query: 247 SEKYGSNIEKAVASFRF 263
S K+ IEK+V SF+F
Sbjct: 335 SVKFKPQIEKSVKSFKF 351
>gi|116784465|gb|ABK23352.1| unknown [Picea sitchensis]
Length = 256
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 147/196 (75%), Gaps = 4/196 (2%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAA----NEDLRVYTDELNKFEISIPQDWQLGAG 128
SR RR+ + Q+A + P VS A AA ED +Y DE +KF + +P+DW G G
Sbjct: 61 SRNGRRQAICQIAALFSAIPCTVSAARAAETELQEDYELYKDETDKFSLLVPRDWIKGEG 120
Query: 129 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 188
+ +G +++TAFYP+ S+V+V+ITGL D+T+MESFG V+AFA+TLV+ LDRSW+RPP
Sbjct: 121 KTDGQRAVTAFYPESGIVSNVNVIITGLSADYTKMESFGTVDAFAETLVNSLDRSWKRPP 180
Query: 189 GVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESE 248
G AAKL++ K+ G YYIEY+LQ PGES+ HL SAIGMA NGWYNRLYTVTGQ++E+++
Sbjct: 181 GQAAKLLNAKSKNGLYYIEYSLQKPGESKIHLLSAIGMAMNGWYNRLYTVTGQYLEDDAG 240
Query: 249 KYGSNIEKAVASFRFI 264
KYGS IEK+++SFR +
Sbjct: 241 KYGSKIEKSISSFRLV 256
>gi|326518660|dbj|BAJ88359.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 147/198 (74%), Gaps = 10/198 (5%)
Query: 76 KRREVMFQL---AFTACSFPAIV-----SYALAANEDLRVYTDELNKFEISIPQDWQLGA 127
KRR+ + + A A S P +V + A A E Y DE NKF ++IPQ WQ+GA
Sbjct: 89 KRRDALLGVLLSATAASSAPLLVPAEAFAEAAEAQEGFTAYEDEANKFTLAIPQGWQVGA 148
Query: 128 GEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRP 187
GE +GFK++TAF+P++ +SSVSVVITG+GPDFT ++SFG V+ FA+ LV+GLDRSW+RP
Sbjct: 149 GERSGFKNVTAFFPEQNPNSSVSVVITGIGPDFTSLKSFGNVDEFAENLVTGLDRSWQRP 208
Query: 188 PGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFV--EE 245
G+ AKLID KA+ G YYIEYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ++ +E
Sbjct: 209 AGLTAKLIDSKAANGLYYIEYTLQNPGEKRRHIVSAIGMAFNGWYNRLYTVTGQYIDDDE 268
Query: 246 ESEKYGSNIEKAVASFRF 263
+S Y IEK+V SF+F
Sbjct: 269 DSAIYKPEIEKSVKSFKF 286
>gi|242082241|ref|XP_002445889.1| hypothetical protein SORBIDRAFT_07g027500 [Sorghum bicolor]
gi|241942239|gb|EES15384.1| hypothetical protein SORBIDRAFT_07g027500 [Sorghum bicolor]
Length = 253
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 135/166 (81%), Gaps = 3/166 (1%)
Query: 101 ANEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPD 159
+ E Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPD
Sbjct: 87 SQEGFTTYEDEANKFSIQVPQGWLVGAGEASGIKSVTAFYPEQAAADSNVSVAITGIGPD 146
Query: 160 FTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKH 219
FT ++SFG V++FA+ LV+GLDRSW+RPPG+AAKLID +A+ G YY+EYTLQNPGE R+H
Sbjct: 147 FTSLKSFGDVDSFAEGLVNGLDRSWQRPPGLAAKLIDSRAANGLYYLEYTLQNPGERRRH 206
Query: 220 LFSAIGMASNGWYNRLYTVTGQFV--EEESEKYGSNIEKAVASFRF 263
+ SAIGMA NGWYNRLYTVTGQ++ +++SEKY IEKAV SFR
Sbjct: 207 IVSAIGMAFNGWYNRLYTVTGQYIDDDDDSEKYRPQIEKAVRSFRL 252
>gi|326501564|dbj|BAK02571.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 167
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/165 (64%), Positives = 133/165 (80%), Gaps = 2/165 (1%)
Query: 101 ANEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDF 160
A E Y DE NKF ++IPQ WQ+GAGE +GFK++TAF+P++ +SSVSVVITG+GPDF
Sbjct: 2 AQEGFTAYEDEANKFTLAIPQGWQVGAGERSGFKNVTAFFPEQNPNSSVSVVITGIGPDF 61
Query: 161 TRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHL 220
T ++SFG V+ FA+ LV+GLDRSW+RP G+ AKLID KA+ G YYIEYTLQNPGE R+H+
Sbjct: 62 TSLKSFGNVDEFAENLVTGLDRSWQRPAGLTAKLIDSKAANGLYYIEYTLQNPGEKRRHI 121
Query: 221 FSAIGMASNGWYNRLYTVTGQFV--EEESEKYGSNIEKAVASFRF 263
SAIGMA NGWYNRLYTVTGQ++ +E+S Y IEK+V SF+F
Sbjct: 122 VSAIGMAFNGWYNRLYTVTGQYIDDDEDSAIYKPEIEKSVKSFKF 166
>gi|326512572|dbj|BAJ99641.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 147/199 (73%), Gaps = 10/199 (5%)
Query: 75 TKRREVMFQL---AFTACSFPAIV-----SYALAANEDLRVYTDELNKFEISIPQDWQLG 126
KRR+ + + A A S P +V + A A E Y DE NKF ++IPQ WQ+G
Sbjct: 45 VKRRDALLGVLLSATAASSAPLLVPAEAFAEAAEAQEGFTAYEDEANKFTLAIPQGWQVG 104
Query: 127 AGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRR 186
AGE +GFK++TAF+P++ +SSVSVVITG+GPDFT ++SFG V+ FA+ LV+GLDRSW+R
Sbjct: 105 AGERSGFKNVTAFFPEQNPNSSVSVVITGIGPDFTSLKSFGNVDEFAENLVTGLDRSWQR 164
Query: 187 PPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFV--E 244
P G+ AKLID KA+ G YYIEYTLQNPGE R+H+ SAIGMA NGWYNRLYTVTGQ++ +
Sbjct: 165 PAGLTAKLIDSKAANGLYYIEYTLQNPGEKRRHIVSAIGMAFNGWYNRLYTVTGQYIDDD 224
Query: 245 EESEKYGSNIEKAVASFRF 263
E+S Y IEK+V SF+F
Sbjct: 225 EDSAIYKPEIEKSVKSFKF 243
>gi|215274041|gb|ACJ64918.1| unknown [Arachis diogoi]
Length = 110
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 105/110 (95%)
Query: 155 GLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPG 214
G+GPDFT+MESFGKVE FA+TL+ GLDRSW+RPPGVAAKLIDCK+SKGFYYIEY+LQNPG
Sbjct: 1 GVGPDFTKMESFGKVEEFAETLIGGLDRSWQRPPGVAAKLIDCKSSKGFYYIEYSLQNPG 60
Query: 215 ESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 264
ESR+ L+SAIGMASNGWYNRLYTVTGQFVEEE++KY S ++KAVASFRFI
Sbjct: 61 ESRRTLYSAIGMASNGWYNRLYTVTGQFVEEETDKYASKVKKAVASFRFI 110
>gi|168003549|ref|XP_001754475.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694577|gb|EDQ80925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 129/192 (67%), Gaps = 3/192 (1%)
Query: 76 KRREVMFQ-LAFTACSF--PAIVSYALAANEDLRVYTDELNKFEISIPQDWQLGAGEPNG 132
+RREV+ Q L + SF PA + A + Y D +KF + +PQ W G G+ +G
Sbjct: 64 QRREVIGQALLAMSMSFAPPARSATDTDAATEFTTYEDAADKFTLLVPQAWNRGEGKTSG 123
Query: 133 FKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAA 192
+ +TAFYP + ++V++VITGLG DFT + SFG + FA+ LV+ LDRSW++PPG A
Sbjct: 124 QRKVTAFYPADGGLTNVNIVITGLGADFTSLGSFGTADNFAENLVNSLDRSWQKPPGQKA 183
Query: 193 KLIDCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGS 252
+L+DCK+ YY+EYT+Q GE ++HL S +G+ +NGW NRLYTVTGQ+ EE+S KY
Sbjct: 184 RLVDCKSRADKYYVEYTIQRLGEQQRHLVSVVGIGNNGWVNRLYTVTGQYFEEDSAKYKQ 243
Query: 253 NIEKAVASFRFI 264
+I K ++SF+ +
Sbjct: 244 DINKIISSFKIL 255
>gi|116782591|gb|ABK22563.1| unknown [Picea sitchensis]
Length = 208
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 100/143 (69%), Gaps = 4/143 (2%)
Query: 73 SRTKRREVMFQLAFTACSFPAIVSYALAA----NEDLRVYTDELNKFEISIPQDWQLGAG 128
SR RR+ + Q+A + P VS A AA ED +Y DE +KF + +P+DW G G
Sbjct: 61 SRNGRRQAICQIAALFSAIPCTVSAARAAETELQEDYELYKDETDKFSLLVPRDWIKGEG 120
Query: 129 EPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP 188
+ +G +++TAFYP+ S+V+V+ITGL D+T+MES G V+AFA+TLV+ LDRSW+RPP
Sbjct: 121 KTDGQRAVTAFYPESGIVSNVNVIITGLSADYTKMESLGTVDAFAETLVNSLDRSWKRPP 180
Query: 189 GVAAKLIDCKASKGFYYIEYTLQ 211
G AAKL++ K+ G YYIEY+LQ
Sbjct: 181 GQAAKLLNAKSKNGLYYIEYSLQ 203
>gi|302818180|ref|XP_002990764.1| hypothetical protein SELMODRAFT_448162 [Selaginella moellendorffii]
gi|300141502|gb|EFJ08213.1| hypothetical protein SELMODRAFT_448162 [Selaginella moellendorffii]
Length = 221
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 114/164 (69%), Gaps = 2/164 (1%)
Query: 101 ANEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDF 160
A ++ +VY +E +KF +++P+DW G G+ G + + AF+P +A+ +V+V+IT LG DF
Sbjct: 58 AADEYQVY-EEQDKFSLTVPKDWIKGEGK-AGSRRVVAFHPSKATFPNVNVIITNLGADF 115
Query: 161 TRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHL 220
T + S G V+AFA ++V +DRS++RPPG AA+L++ + G YY++YT+Q PGE+++H
Sbjct: 116 TGIGSLGSVDAFAASVVGSMDRSYKRPPGTAARLVNAVSRNGMYYLDYTVQTPGEAQRHF 175
Query: 221 FSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 264
FS G+ +Y +LYT TGQ+ E + ++ +++A+ SFR +
Sbjct: 176 FSVAGVGETQFYKQLYTATGQYWEADGDRDRKALQEAIESFRIV 219
>gi|356577616|ref|XP_003556920.1| PREDICTED: LOW QUALITY PROTEIN: psbP domain-containing protein 3,
chloroplastic-like [Glycine max]
Length = 113
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/102 (70%), Positives = 84/102 (82%), Gaps = 2/102 (1%)
Query: 99 LAANEDLRVYTDELNKFEISIPQDWQLGA--GEPNGFKSITAFYPQEASSSSVSVVITGL 156
+ +ED+RVYT+ NKF+I IPQ+WQ+G GE +GFKSITAFYP AS+S+VSVVITGL
Sbjct: 12 IDVSEDVRVYTENENKFKIEIPQEWQVGTRDGESSGFKSITAFYPTVASNSNVSVVITGL 71
Query: 157 GPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCK 198
GP+FTRMESFGKV FA TLVSGLD S R+P GVAAKLI CK
Sbjct: 72 GPNFTRMESFGKVGEFAQTLVSGLDGSXRKPSGVAAKLIHCK 113
>gi|413953068|gb|AFW85717.1| hypothetical protein ZEAMMB73_055926 [Zea mays]
Length = 277
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 89/141 (63%), Gaps = 25/141 (17%)
Query: 102 NEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDF 160
+E Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV I +GPDF
Sbjct: 124 DEGFTTYEDEANKFNIQVPQGWLVGAGEASGIKSVTAFYPEQAATDSNVSVAIIEIGPDF 183
Query: 161 TRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHL 220
T ++SFG V AFA+ LV YY+EYT QNPGE R+H+
Sbjct: 184 TSLKSFGDVAAFAEGLVR------------------------LYYLEYTSQNPGERRRHI 219
Query: 221 FSAIGMASNGWYNRLYTVTGQ 241
SAIGMA NGWYNRLY TGQ
Sbjct: 220 VSAIGMAFNGWYNRLYIATGQ 240
>gi|357467181|ref|XP_003603875.1| PsbP domain-containing protein [Medicago truncatula]
gi|355492923|gb|AES74126.1| PsbP domain-containing protein [Medicago truncatula]
Length = 174
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 84/110 (76%), Gaps = 3/110 (2%)
Query: 77 RREVMFQLAFTACSFPAIVSYALAAN---EDLRVYTDELNKFEISIPQDWQLGAGEPNGF 133
RR+++ + A + + S ALA N ED +YTD+ NKF+I IPQ+WQ+G GE GF
Sbjct: 51 RRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGF 110
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRS 183
KS+TAFYP+E S+S+VSVVITG+GPDFT+MESFGKVE FADTLV LD++
Sbjct: 111 KSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVLFLDQN 160
>gi|255083562|ref|XP_002504767.1| oxygen-evolving enhancer PsbP [Micromonas sp. RCC299]
gi|226520035|gb|ACO66025.1| oxygen-evolving enhancer PsbP [Micromonas sp. RCC299]
Length = 248
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 112/213 (52%), Gaps = 16/213 (7%)
Query: 61 LNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANED------LRVYTDELNK 114
++R R E D S +RRE+ LA A S +I ++ A D +VY DE +K
Sbjct: 32 VSRTRAEASADGS-LERREL---LAGAATSLVSIAAFPRVARADEPATTLTQVYNDEEDK 87
Query: 115 FEISIPQDWQLGAGE----PNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVE 170
+ +++P DW+ G+ P + + AFYP +V+VV T LG D+ +M SFG +
Sbjct: 88 YSLAVPSDWERALGDTSPNPQSTRKVIAFYPPGQPEINVNVVATALGADYPKMGSFGSPD 147
Query: 171 AFADTLVSGLDRS-WRRPPGVAAKLIDCKASKGFYYIEYTLQNPGES-RKHLFSAIGMAS 228
FA + +G+ R R+ P + ++D K + Y IEYT++ P E+ +HL SA+G+
Sbjct: 148 EFAYGVAAGMTRPKPRQGPKQFSYVVDAKNAGDRYVIEYTVERPEENFYQHLLSAVGIGY 207
Query: 229 NGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 261
NG NRL+T+T E+ + K A+F
Sbjct: 208 NGRVNRLFTLTAVCPEDRYAEMEPMFRKIFATF 240
>gi|307103403|gb|EFN51663.1| hypothetical protein CHLNCDRAFT_139877 [Chlorella variabilis]
Length = 295
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 27/183 (14%)
Query: 107 VYTDELNKFEISIPQDWQLGAG----------------EPNGFKSITAFYPQEASSSSVS 150
VYTD +KF I +P W L G G + + AF P++ SV+
Sbjct: 107 VYTDPEDKFSIEVPSGWALATGAFGEEGTLTTNQARFSNAAGLRRVVAFLPEDKPEVSVA 166
Query: 151 VVITGLGPDFTRMESFGKVEAFADTLVSGLDRS-------WRR---PPGVAAKLIDCK-A 199
V I LG D+T + SFG + FA +V+ +D S WRR PP AKL+D K
Sbjct: 167 VTIQFLGADYTGLGSFGTAQDFATGVVNKMDNSYILKLPEWRRAKEPPVQVAKLLDVKDV 226
Query: 200 SKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVA 259
K Y YTL GE+++ ++ A+ + +NG NR YTV + E+YG ++K V
Sbjct: 227 DKRQYMFAYTLAKEGEAQRTVYQAVAVGNNGRTNRFYTVNASCAGADVEQYGPVLQKIVE 286
Query: 260 SFR 262
SFR
Sbjct: 287 SFR 289
>gi|159480798|ref|XP_001698469.1| hypothetical protein CHLREDRAFT_205923 [Chlamydomonas reinhardtii]
gi|158282209|gb|EDP07962.1| predicted protein [Chlamydomonas reinhardtii]
Length = 258
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 93/175 (53%), Gaps = 21/175 (12%)
Query: 108 YTDELNKFEISIPQDWQLGAGEPNGFKSIT---------AFYPQEASSSSVSVVIT--GL 156
YTD + F + IP +W G G+ +G S + A++P+ S V+V IT +
Sbjct: 77 YTDPQDAFTLKIPANWGFGEGQLSGNSSFSGASGARRTLAWFPENVSPRDVNVTITVTNV 136
Query: 157 GPDFTRMESFGKVEAFADTLVSGLDRSW---------RRPPGVAAKLIDCKASKGFYYIE 207
+FT++ SFG FA LV+ DRS+ R P + AKLID Y++E
Sbjct: 137 SVEFTKLGSFGTPLQFASNLVNSQDRSYMLRGPEWARRNEPIMVAKLIDAGEISNKYFLE 196
Query: 208 YTLQN-PGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 261
YTLQ P E ++HL++A+ + NG YNRLY+VT Q +EE +Y + + V S
Sbjct: 197 YTLQKVPDEPKRHLYTAVALGYNGTYNRLYSVTAQSLEELKPQYEATLLAMVKSL 251
>gi|414869461|tpg|DAA48018.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
gi|414869462|tpg|DAA48019.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
Length = 178
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 85/135 (62%), Gaps = 8/135 (5%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIV-SYALA------ANE 103
++ Q+ A T+ R ++ +R ++ + F+A + P + + ALA + E
Sbjct: 34 RRLQQAAATTVCHCRSARVEEGLLGRRDALLLGIVFSAATPPLLAPAGALADEATAESQE 93
Query: 104 DLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS-SSVSVVITGLGPDFTR 162
Y DE NKF I +PQ W +GAGE +G KS+TAFYP++A++ S+VSV ITG+GPDFT
Sbjct: 94 GFTTYEDEANKFSIQVPQGWLVGAGEASGIKSVTAFYPEQAATDSNVSVAITGIGPDFTS 153
Query: 163 MESFGKVEAFADTLV 177
++SFG V+AFA+ LV
Sbjct: 154 LKSFGDVDAFAEGLV 168
>gi|384245846|gb|EIE19338.1| hypothetical protein COCSUDRAFT_58632 [Coccomyxa subellipsoidea
C-169]
Length = 191
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 83/137 (60%), Gaps = 6/137 (4%)
Query: 132 GFKSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGV- 190
G + A+YP+ + ++V+V++T +G D+T + SFG ++F + L++ LDRS+ G+
Sbjct: 49 GTRRALAWYPEGGTDTNVTVLVTNVGADYTALGSFGSADSFGENLIASLDRSFLLRGGMN 108
Query: 191 ----AAKLIDCKASKGFYYIEYTLQNPGE-SRKHLFSAIGMASNGWYNRLYTVTGQFVEE 245
AKL+D K+ G Y++EYT+Q P E +H SA+ + NG YNR YT+T Q E
Sbjct: 109 RPQSRAKLLDAKSRSGMYFLEYTVQKPEEIEPRHFLSAVALGFNGRYNRFYTLTAQCPEA 168
Query: 246 ESEKYGSNIEKAVASFR 262
+ Y + +E V SFR
Sbjct: 169 DLSTYRATLEGVVNSFR 185
>gi|303283586|ref|XP_003061084.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457435|gb|EEH54734.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 265
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 100 AANEDLRVYTDELNKFEISIPQDWQLGAG----EPNGFKSITAFYPQEASSSSVSVVITG 155
A + + Y D +K+ S+P DW+ G P + +TA++P +V+VV T
Sbjct: 90 AEGAETKRYVDAEDKYSFSVPADWEQAIGTTDDNPQSSRRVTAYFPPGDPDINVNVVCTA 149
Query: 156 LGPDFTRMESFGKVEAFADTLVSGLDRSWRRP-PGVAAKLIDCKASKGFYYIEYTLQNPG 214
LG D+ +M SFG + FA + +G+ R + P + +++ K+ Y+IEYT++ P
Sbjct: 150 LGADYPKMGSFGSPDEFAFGVAAGMTRPKPKSGPKQFSYVLNAKSKGDKYFIEYTVERPS 209
Query: 215 ES-RKHLFSAIGMASNGWYNRLYTVTGQFVEEE 246
E +HL S +G+ NG +RL T T E++
Sbjct: 210 EDFYQHLMSVVGVGYNGRVSRLITATAVCPEDK 242
>gi|412985511|emb|CCO18957.1| predicted protein [Bathycoccus prasinos]
Length = 319
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 42/226 (18%)
Query: 76 KRREVMFQLAFTACSFPAIV----------SYALAANED--------------LRVYTDE 111
+R+ +M TA +F ++V YA AA ED YTDE
Sbjct: 88 RRKAMMVSATTTAFAFASMVLSMDDTNKNNYYAFAAEEDESSTKMMNTNTNKNTTTYTDE 147
Query: 112 LNKFEISIPQD-WQL------GAGEPNGFKSITAFYPQEASSSSV--SVVITGLGPDFTR 162
+ KF +S P D WQL G+G+ +G + + AF P+ A+ V S+V T +G D+ +
Sbjct: 148 VLKFSLSYPTDSWQLLVGETGGSGDRSGSRQVIAFAPKNANPKDVNISLVATPVGADYPK 207
Query: 163 MESFGKVEAFADTLVSGLDR----SWRRPPGVAAKLIDCKASKGF-YYIEYTLQNP--GE 215
M SFG F +V+ +++ R ++LI+ SKG Y++EY L P G
Sbjct: 208 MGSFGSPFEFGYNMVNPMNKPKAKKGREDEVQYSELIEA-GSKGLNYFVEYELTRPSTGI 266
Query: 216 SRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 261
K L A G+ +G + LY+ T Q + E EK+ IEK + S
Sbjct: 267 DSKQLVVA-GIGYDGRVSHLYSTTAQMPKGEEEKWRPEIEKILESL 311
>gi|308799735|ref|XP_003074648.1| thylakoid lumen protein, chloroplast prec (ISS) [Ostreococcus
tauri]
gi|116000819|emb|CAL50499.1| thylakoid lumen protein, chloroplast prec (ISS) [Ostreococcus
tauri]
Length = 195
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Query: 101 ANEDLRVYTDELNKFEISIPQDWQLGAGE--------PNGFKSI-TAFYPQEASSSSVSV 151
A+E LR Y D+ +F + P DW + G G + + T P +V+V
Sbjct: 13 ADESLRTYADDELRFTLEYPSDWVVATGSLERSENPMGGGARDVWTISPPGRTRDVNVTV 72
Query: 152 VITGLGPDFTRMESFGKVEAFADTLVSGLDR----SWRRPPGVAAKLIDCKASKGFYYIE 207
V T G DFT+M S G F LV+ L R R A+L+D +Y +E
Sbjct: 73 VATPAGADFTKMGSLGDAYGFGMGLVAPLHRPKLKKGREDRVQRAELVDAYGKGDYYKVE 132
Query: 208 YTLQNPGESRKHLFSAI-GMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 263
YT + P +F + G+ +G LYT T QF E K+ + IE V S ++
Sbjct: 133 YTFERPAADIDSVFLVLAGLGYDGRVGHLYTTTAQFPRAEESKWRAQIEAIVDSVKY 189
>gi|302849364|ref|XP_002956212.1| hypothetical protein VOLCADRAFT_97118 [Volvox carteri f.
nagariensis]
gi|300258515|gb|EFJ42751.1| hypothetical protein VOLCADRAFT_97118 [Volvox carteri f.
nagariensis]
Length = 205
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 43/173 (24%)
Query: 100 AANEDLRVYTDELNKFEISIPQDWQLGAGE---------PNGFKSITAFYPQEASSSSVS 150
A L YTD + F +++P W G GE +G + + P+ A+ V+
Sbjct: 20 GATSVLSRYTDPQDGFTLAVPPGWVFGEGELPGNSSFSGASGARRTLVWIPEGANPRDVN 79
Query: 151 V--VITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEY 208
V VIT + V AKL+D G Y++EY
Sbjct: 80 VTLVITNVS--------------------------------VVAKLVDATELSGRYFVEY 107
Query: 209 TLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 261
T+Q E ++HL+S + + NG YNRLYT+T Q +E + +Y + + V S
Sbjct: 108 TVQKLPEPQRHLYSLLALGYNGMYNRLYTITAQTLEGDRPQYEAALLSMVKSL 160
>gi|145341129|ref|XP_001415667.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575890|gb|ABO93959.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 192
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 105 LRVYTDELNKFEISIPQDWQLGAGEP--------NGFKSITAFYPQEASSSSVSVVI--T 154
L Y D+ KF++ P DW GE G + + P A++ V+V I T
Sbjct: 13 LTTYEDDKLKFKVQYPSDWTTSTGETPASEEILGGGARDLFTISPPGANARDVNVTIVAT 72
Query: 155 GLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA-----AKLIDCKASKGFYYIEYT 209
G DFT+M S G F LV L++ R G A+LID +Y +EY
Sbjct: 73 PAGADFTKMGSLGDAYGFGYGLVVPLNKP-RAKKGQEDRIQFAELIDSVGKGDYYKVEYK 131
Query: 210 LQNPGESRKHLFSAI-GMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 263
P +F + G+ +G + LYT T Q+ E +K+ + +E + S +
Sbjct: 132 FAKPSTGINSIFFVLAGLGYDGRVSHLYTATAQYPRAEEDKWRAQVEAIIDSVVY 186
>gi|414869463|tpg|DAA48020.1| TPA: hypothetical protein ZEAMMB73_646546 [Zea mays]
Length = 40
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Query: 226 MASNGWYNRLYTVTGQFV-EEESEKYGSNIEKAVASFRF 263
MA NGWYNRLYTVTGQ++ +++SEKY IEKAV SFR
Sbjct: 1 MAFNGWYNRLYTVTGQYIDDDDSEKYRPQIEKAVGSFRL 39
>gi|298709150|emb|CBJ31094.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 230
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 106 RVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPDFTRMES 165
+ +TD+ F +P W+ E +G + I + ++ V T DFT + S
Sbjct: 80 QTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPTTPGANAFVAYTPARGDFTTLGS 139
Query: 166 FGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLFSA-I 224
FG ++ + T++ GV++++++ K Y +Y + G KH+ + +
Sbjct: 140 FGTLDEVSKTVLP-------EASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIKTMWV 192
Query: 225 GMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVAS 260
G +L T+T Q E + K G I+ +AS
Sbjct: 193 LFPEQG---QLATITAQCNESDYAKVGKTIDSLIAS 225
>gi|255542694|ref|XP_002512410.1| conserved hypothetical protein [Ricinus communis]
gi|223548371|gb|EEF49862.1| conserved hypothetical protein [Ricinus communis]
Length = 268
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 136 ITAFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKL 194
+ AF P +S +VSV+++ + PDF+ +E+FG E + +V + S RR P V L
Sbjct: 139 VVAFGPPGSSGELNVSVIVSPVPPDFS-IEAFGGPEEVGEAVVKTITASGRR-PDVKGSL 196
Query: 195 I------DCKASKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESE 248
+ D + +Y +E+ +++P R ++ A+ +G RLYT+ Q E +
Sbjct: 197 VQSRLREDSLRNVNYYELEFRVESPSFQRHNV--AVCCTRDG---RLYTLNAQAPESAWQ 251
Query: 249 KYGSNIEKAVASFRFI 264
K + + SF +
Sbjct: 252 KVSPDFSRIAESFTLL 267
>gi|335046123|ref|ZP_08539146.1| putative membrane protein [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333759909|gb|EGL37466.1| putative membrane protein [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 343
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLRV--- 107
K E++ R + + QDD SR K+RE +F + F CSF A++ +A N + +
Sbjct: 4 KDSTEENRRMPENYHL--QDDASRKKKRERIFTVLFLFCSFCALMIFAFYVNRHIHIKAL 61
Query: 108 YTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPD 159
Y D+L F QD+ P G + F P + S + +V G P+
Sbjct: 62 YMDDLYLFSFFREQDF-FTFSFPIG--NAVRFRPVYWAISYIEMVFVGNDPN 110
>gi|363896506|ref|ZP_09323057.1| hypothetical protein HMPREF9624_01801 [Oribacterium sp. ACB7]
gi|361960792|gb|EHL14025.1| hypothetical protein HMPREF9624_01801 [Oribacterium sp. ACB7]
Length = 613
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 51 KQEQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLRV--- 107
K E++ R + + QDD SR K+RE +F + F CSF A++ +A N + +
Sbjct: 4 KDSTEENRRMPENYHL--QDDASRKKKRERIFTVLFLFCSFCALMIFAFYVNRHIHIKAL 61
Query: 108 YTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPD 159
Y D+L F QD+ P G + F P + S + +V G P+
Sbjct: 62 YMDDLYLFSFFREQDF-FTFSFPIG--NAVRFRPVYWALSYIEMVFVGNDPN 110
>gi|226531512|ref|NP_001142529.1| uncharacterized protein LOC100274771 [Zea mays]
gi|195605962|gb|ACG24811.1| hypothetical protein [Zea mays]
Length = 282
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 74 RTKRREVMFQLA-FTAC-----SFPAIVSYALAANEDLRVYTDELNKFEISIPQDWQLGA 127
R+ R +V++++ FT C F I + ++ L + + + S+
Sbjct: 80 RSLRLDVLYRVGGFTRCLDSDNGFEFIYPSSWVGDQTLLYREAKKAELQRSLDPPPLPNG 139
Query: 128 GEPNGFKSIT----AFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDR 182
G P+G ++I+ AF P ++ +VSV+++ + DF+ +E+FG + + ++ + R
Sbjct: 140 GSPSGPRNISEPVAAFGPPGSNGELNVSVIVSTVPRDFS-IETFGSPKDVGEVVLRRIAR 198
Query: 183 SWRRPPGVAAKLIDCKASKG-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYT 237
+ RR PG+ A LID + +Y +E+ +++P R ++ A+ +G RLYT
Sbjct: 199 T-RRSPGINATLIDAAVREDAGRVKYYKLEFRVESPSFRRHNV--AVCCVRDG---RLYT 252
Query: 238 VTGQFVE 244
+ Q E
Sbjct: 253 MNAQAPE 259
>gi|428171810|gb|EKX40724.1| hypothetical protein GUITHDRAFT_113254 [Guillardia theta CCMP2712]
Length = 222
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 108 YTDELNKFEISIPQDWQLGAGE-PNGFKS-----ITAFYPQEASSSSVSVVITGLGPDFT 161
Y D+ FE +PQ W G E P G ++ I +F + ++++V + PD++
Sbjct: 64 YADDARGFEFQVPQGWIQGEAEFPGGNRNPARPKIISFRSPTSDDFNIALVSYSIQPDYS 123
Query: 162 RMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYIEYTLQNPGESRKHLF 221
++ SFG +E A ++ +++ ++ K + G Y Y + + + +F
Sbjct: 124 KLGSFGTIEDVAKNIIGTNEKASTIGEILSQKQTNLGGGPG-YIFNYRIND--KRLATIF 180
Query: 222 -SAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 263
+++G + W L T+T Q E + + ++E+ + SF+
Sbjct: 181 TTSVGSSGACW---LVTLTMQCPEAQWDDNQKSVEEVLKSFKL 220
>gi|110289199|gb|AAP54144.2| PsbP family protein, expressed [Oryza sativa Japonica Group]
Length = 352
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 102/270 (37%), Gaps = 52/270 (19%)
Query: 12 ASISPLHTWSQ------RPHHASFTAFSNNKGTNQYKKQFVFCCKKQEQEDDARTLNRFR 65
A +SP+ + + P H +F A + N + + E++ R L
Sbjct: 97 AMLSPMQSLRRELSSGVHPLHGNFVALVHVFAKNDLATRCMEILATMERQSIKRELES-- 154
Query: 66 IEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLRVYTDELNKFEISIPQDWQ- 124
++RR ++ A S+P + + A A + TD+ + + P WQ
Sbjct: 155 ---------SRRRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLYPFGWQE 205
Query: 125 -LGAGEPNGFKSITAFYPQEASSSSVSVVITG------LGPDFTRMESFGKVEAFADTLV 177
+ G+ +K + P E S SV+ + T LGP D +
Sbjct: 206 VVVQGQDKVYKDV--IEPLE--SVSVNTIPTSKQDIRELGPP--------------DQVA 247
Query: 178 SGLDRSWRRPPGVAAKLIDCKAS----KGFYYIEYTLQNPGESRKHLFSAIGMASNGWYN 233
L R P KLI+ K + + +Y E+T Q P +R H AI +A NG
Sbjct: 248 EALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTR-HALGAIAIA-NG--- 302
Query: 234 RLYTVTGQFVEEESEKYGSNIEKAVASFRF 263
+ YT+T E EK + V SF+
Sbjct: 303 KFYTLTTGANERRWEKIKDRLHTVVDSFKI 332
>gi|115482366|ref|NP_001064776.1| Os10g0461100 [Oryza sativa Japonica Group]
gi|110289195|gb|ABG66116.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
gi|113639385|dbj|BAF26690.1| Os10g0461100 [Oryza sativa Japonica Group]
Length = 537
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 60 TLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLRVYTDELNKFEISI 119
T+ R I+ + + SR RR ++ A S+P + + A A + TD+ + +
Sbjct: 329 TMERQSIKRELESSR--RRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLY 386
Query: 120 PQDWQ--LGAGEPNGFKSITAFYPQEASSSSVSVV------ITGLGPDFTRMESFGKVEA 171
P WQ + G+ +K + P E S SV+ + I LGP
Sbjct: 387 PFGWQEVVVQGQDKVYKDV--IEPLE--SVSVNTIPTSKQDIRELGP------------- 429
Query: 172 FADTLVSGLDRSWRRPPGVAAKLIDCKAS----KGFYYIEYTLQNPGESRKHLFSAIGMA 227
D + L R P KLI+ K + + +Y E+T Q P +R H AI +A
Sbjct: 430 -PDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTR-HALGAIAIA 487
Query: 228 SNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 263
NG + YT+T E EK + V SF+
Sbjct: 488 -NG---KFYTLTTGANERRWEKIKDRLHTVVDSFKI 519
>gi|110289198|gb|ABG66119.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
Length = 536
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 60 TLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLRVYTDELNKFEISI 119
T+ R I+ + + SR RR ++ A S+P + + A A + TD+ + +
Sbjct: 328 TMERQSIKRELESSR--RRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLY 385
Query: 120 PQDWQ--LGAGEPNGFKSITAFYPQEASSSSVSVVITG------LGPDFTRMESFGKVEA 171
P WQ + G+ +K + P E S SV+ + T LGP
Sbjct: 386 PFGWQEVVVQGQDKVYKDV--IEPLE--SVSVNTIPTSKQDIRELGP------------- 428
Query: 172 FADTLVSGLDRSWRRPPGVAAKLIDCKAS----KGFYYIEYTLQNPGESRKHLFSAIGMA 227
D + L R P KLI+ K + + +Y E+T Q P +R H AI +A
Sbjct: 429 -PDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTR-HALGAIAIA 486
Query: 228 SNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 263
NG + YT+T E EK + V SF+
Sbjct: 487 -NG---KFYTLTTGANERRWEKIKDRLHTVVDSFKI 518
>gi|110289196|gb|ABG66117.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
gi|215701443|dbj|BAG92867.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215769320|dbj|BAH01549.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 523
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 60 TLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLRVYTDELNKFEISI 119
T+ R I+ + + SR RR ++ A S+P + + A A + TD+ + +
Sbjct: 329 TMERQSIKRELESSR--RRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLY 386
Query: 120 PQDWQ--LGAGEPNGFKSITAFYPQEASSSSVSVVITG------LGPDFTRMESFGKVEA 171
P WQ + G+ +K + P E S SV+ + T LGP
Sbjct: 387 PFGWQEVVVQGQDKVYKDV--IEPLE--SVSVNTIPTSKQDIRELGP------------- 429
Query: 172 FADTLVSGLDRSWRRPPGVAAKLIDCKAS----KGFYYIEYTLQNPGESRKHLFSAIGMA 227
D + L R P KLI+ K + + +Y E+T Q P +R H AI +A
Sbjct: 430 -PDQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTR-HALGAIAIA 487
Query: 228 SNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 263
NG + YT+T E EK + V SF+
Sbjct: 488 -NG---KFYTLTTGANERRWEKIKDRLHTVVDSFKI 519
>gi|110289197|gb|ABG66118.1| PsbP family protein, expressed [Oryza sativa Japonica Group]
Length = 323
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 60 TLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLRVYTDELNKFEISI 119
T+ R I+ + + SR RR ++ A S+P + + A A + TD+ + +
Sbjct: 129 TMERQSIKRELESSR--RRMLLAAGAAVFLSWPNLAANAAEAKKGFLPVTDKKDGYSFLY 186
Query: 120 PQDWQ--LGAGEPNGFKSITAFYPQEASSSSVSVVITG------LGPDFTRMESFGKVEA 171
P WQ + G+ +K + P E S SV+ + T LGP
Sbjct: 187 PFGWQEVVVQGQDKVYKDV--IEPLE--SVSVNTIPTSKQDIRELGPP------------ 230
Query: 172 FADTLVSGLDRSWRRPPGVAAKLIDCKAS----KGFYYIEYTLQNPGESRKHLFSAIGMA 227
D + L R P KLI+ K + + +Y E+T Q P +R H AI +A
Sbjct: 231 --DQVAEALIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTR-HALGAIAIA 287
Query: 228 SNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRF 263
NG + YT+T E EK + V SF+
Sbjct: 288 -NG---KFYTLTTGANERRWEKIKDRLHTVVDSFKI 319
>gi|363899965|ref|ZP_09326471.1| hypothetical protein HMPREF9625_01131 [Oribacterium sp. ACB1]
gi|395207515|ref|ZP_10397039.1| putative membrane protein [Oribacterium sp. ACB8]
gi|361956819|gb|EHL10131.1| hypothetical protein HMPREF9625_01131 [Oribacterium sp. ACB1]
gi|394706592|gb|EJF14099.1| putative membrane protein [Oribacterium sp. ACB8]
Length = 618
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 49 CKKQ--EQEDDARTLNRFRIEEQDDDSRTKRREVMFQLAFTACSFPAIVSYALAANEDLR 106
KKQ + ED N ++EE+ + R KR+ +F+L F CSF ++ +A N +
Sbjct: 29 VKKQSLQDEDYVEKKNSLQVEEKRE-KRQKRQGNIFRLLFFLCSFCLLMLFAFYVNRHIH 87
Query: 107 V---YTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGPD 159
+ Y D+L F QD+ L P G F P + S + +V G P+
Sbjct: 88 IKALYMDDLYLFSFFREQDF-LTFSFPIG--EAVRFRPVYWALSYIEMVFVGNDPN 140
>gi|242055511|ref|XP_002456901.1| hypothetical protein SORBIDRAFT_03g045040 [Sorghum bicolor]
gi|241928876|gb|EES02021.1| hypothetical protein SORBIDRAFT_03g045040 [Sorghum bicolor]
Length = 279
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
Query: 120 PQDWQLGAGEPNGFKSITAFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVS 178
P G N + + AF P +S +VSV+++ + DF+ +E+FG + + ++
Sbjct: 133 PPPLPNGKSPRNISEPVAAFGPPGSSGELNVSVIVSPVPRDFS-IEAFGSPKDVGEVVLR 191
Query: 179 GLDRSWRRPPGVAAKLIDCKA-----SKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYN 233
+ R+ RR P + A LID S +Y +E+ +++P R ++ A+ A +G
Sbjct: 192 RIART-RRSPDINATLIDAALREDADSVKYYKLEFRVESPSFQRHNV--AVCCARDG--- 245
Query: 234 RLYTVTGQFVE 244
+LYT+ Q E
Sbjct: 246 KLYTMNAQAPE 256
>gi|414878822|tpg|DAA55953.1| TPA: hypothetical protein ZEAMMB73_857058 [Zea mays]
Length = 283
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 17/128 (13%)
Query: 127 AGEPNGFKSIT----AFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 181
G P+G ++I+ AF P ++ +VSV+++ + DF+ +E+FG + + ++ +
Sbjct: 140 GGSPSGPRNISEPVAAFGPPGSNGELNVSVIVSTVPRDFS-IETFGSPKDVGEVVLRRIA 198
Query: 182 RSWRRPPGVAAKLIDCKASKG-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLY 236
R+ RR P + A LID + +Y +E+ +++P R ++ A+ +G RLY
Sbjct: 199 RT-RRSPDINATLIDAAVREDAGRVKYYKLEFRVESPSFRRHNV--AVCCVRDG---RLY 252
Query: 237 TVTGQFVE 244
T+ Q E
Sbjct: 253 TMNAQAPE 260
>gi|38636895|dbj|BAD03159.1| oxygen evolving complex protein-like [Oryza sativa Japonica Group]
Length = 257
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 73/186 (39%), Gaps = 35/186 (18%)
Query: 90 SFPAIVSYALAANEDLRVYTDELNKFEISIPQDWQ--LGAGEPNGFKSITAFYPQEASSS 147
S+P +YA A + TD+ + + P WQ + G+ +K + + S
Sbjct: 78 SWPNPAAYAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVYKDVI----EPLESV 133
Query: 148 SVSVVITG------LGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKAS- 200
SV+ + T LGP D + L R P KLI+ K +
Sbjct: 134 SVNTIPTSKQDIRELGP--------------PDQVAEALIRKVLAAPTQKTKLIEAKEND 179
Query: 201 ---KGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKA 257
+ +Y E+T Q P +R H AI +A NG + YT+T E EK +
Sbjct: 180 VDGRTYYTFEFTAQAPNFTR-HALGAIAIA-NG---KFYTLTTGANERRWEKIKDRLHTV 234
Query: 258 VASFRF 263
V SF+
Sbjct: 235 VDSFKI 240
>gi|259490126|ref|NP_001159068.1| uncharacterized protein LOC100304114 [Zea mays]
gi|195650741|gb|ACG44838.1| hypothetical protein [Zea mays]
Length = 282
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 17/128 (13%)
Query: 127 AGEPNGFKSIT----AFYPQEASSS-SVSVVITGLGPDFTRMESFGKVEAFADTLVSGLD 181
G P+G ++I+ AF P ++ +VSV+++ + DF+ +E+FG + + ++ +
Sbjct: 139 GGSPSGPRNISEPVAAFGPPGSNGELNVSVIVSTVPRDFS-IETFGSPKDVGEVVLRRIA 197
Query: 182 RSWRRPPGVAAKLIDCKASKG-----FYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLY 236
R+ RR P + A LID + +Y +E+ +++P R ++ A+ +G RLY
Sbjct: 198 RT-RRSPDINATLIDAXVREDAGRVKYYKLEFRVESPSFRRHNV--AVCCVRDG---RLY 251
Query: 237 TVTGQFVE 244
+ Q E
Sbjct: 252 XMNAQAPE 259
>gi|222640410|gb|EEE68542.1| hypothetical protein OsJ_27001 [Oryza sativa Japonica Group]
Length = 244
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 73/187 (39%), Gaps = 35/187 (18%)
Query: 89 CSFPAIVSYALAANEDLRVYTDELNKFEISIPQDWQ--LGAGEPNGFKSITAFYPQEASS 146
S+P +YA A + TD+ + + P WQ + G+ +K + + S
Sbjct: 77 LSWPNPAAYAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVYKDVI----EPLES 132
Query: 147 SSVSVVITG------LGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKAS 200
SV+ + T LGP D + L R P KLI+ K +
Sbjct: 133 VSVNTIPTSKQDIRELGP--------------PDQVAEALIRKVLAAPTQKTKLIEAKEN 178
Query: 201 ----KGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEK 256
+ +Y E+T Q P +R H AI +A NG + YT+T E EK +
Sbjct: 179 DVDGRTYYTFEFTAQAPNFTR-HALGAIAIA-NG---KFYTLTTGANERRWEKIKDRLHT 233
Query: 257 AVASFRF 263
V SF+
Sbjct: 234 VVDSFKI 240
>gi|434392011|ref|YP_007126958.1| photosystem II oxygen evolving complex protein PsbP [Gloeocapsa sp.
PCC 7428]
gi|428263852|gb|AFZ29798.1| photosystem II oxygen evolving complex protein PsbP [Gloeocapsa sp.
PCC 7428]
Length = 180
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 27/188 (14%)
Query: 80 VMFQLAFTACSFPAIVSYALAANEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAF 139
+ F ++ T+CS +A L+ Y D + +E P W + NG +
Sbjct: 11 ITFSVSLTSCS---------SAVSGLKSYVDSTDGYEFLYPNGW-VPVNVSNGPDVV--L 58
Query: 140 YPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPP--GVAAKLIDC 197
+ ++ +VSVVI+ + P + G L +S PP G A+L++
Sbjct: 59 HDLIETTENVSVVISDV-PQGKTLADLGSPSEVG----YKLGKSAIAPPESGREAELVNA 113
Query: 198 KA----SKGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSN 253
+ +K +Y +EYT++ P + ++H +++ ++ +L+T E K
Sbjct: 114 EELATDAKTYYLLEYTVKLPNQQQRHNIASVAVSR----GKLFTFNASTPERRWTKVKPT 169
Query: 254 IEKAVASF 261
++ V SF
Sbjct: 170 LDAVVKSF 177
>gi|443312253|ref|ZP_21041872.1| PsbP [Synechocystis sp. PCC 7509]
gi|442777723|gb|ELR87997.1| PsbP [Synechocystis sp. PCC 7509]
Length = 181
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 18/169 (10%)
Query: 99 LAANEDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASSSSVSVVITGLGP 158
+ A L+ Y D ++ +E P WQ NG + F+ S +VSVV++ +
Sbjct: 22 VTAGAGLKSYVDAISGYEFLYPNGWQ-PVKVANGADVV--FHDLIEISENVSVVVSPVAN 78
Query: 159 DFTRMESFGKVEAFADTLVSGLDRSWRRPP--GVAAKLIDCKA----SKGFYYIEYTLQN 212
T E E L +S PP G A+L++ + K +Y +EY ++
Sbjct: 79 GKTLAELGTPTEVGYK-----LSKSAIAPPDSGREAELVNAASREVKGKKYYLLEYAVKL 133
Query: 213 PGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASF 261
P + +H +++ ++ +LYT E +K E V SF
Sbjct: 134 PNQQERHNLASVAVSR----GKLYTFNASTPERRWQKVQKQFESVVDSF 178
>gi|219115451|ref|XP_002178521.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410256|gb|EEC50186.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 223
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 88 ACSFPAIVSYALAAN-EDLRVYTDELNKFEISIPQDWQLGAGEPNGFKSITAFYPQEASS 146
A FP S A+A + L + D + F + +P W + + ++I + +
Sbjct: 45 AVGFP---STAVAVSVPTLTPFLDSRHGFTVDVPSQWSRTEQQLSDRRTIVVWTDPADAR 101
Query: 147 SSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKASKGFYYI 206
+SV V T + DFT + SFG V+ A + L ++ V A ++ + K Y+
Sbjct: 102 ASVFVAYTPVRDDFTSLGSFGSVDQVAAQTI--LPKAQIAGVDVEATMLAAVSQKQAYFF 159
Query: 207 EY-----TLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEE-SEKYGSNIEKAVAS 260
+Y +Q P R +F+ A+ G L T+T Q EE + KY S + + S
Sbjct: 160 DYRQAVPNVQPPTHFRT-IFTLQQGATGGAGAVLVTLTAQCPEELYATKYQSLFDSILDS 218
Query: 261 F 261
+
Sbjct: 219 Y 219
>gi|218201012|gb|EEC83439.1| hypothetical protein OsI_28915 [Oryza sativa Indica Group]
Length = 244
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 35/187 (18%)
Query: 89 CSFPAIVSYALAANEDLRVYTDELNKFEISIPQDWQ--LGAGEPNGFKSITAFYPQEASS 146
S+P +YA A + TD+ + + P WQ + G+ +K + + S
Sbjct: 77 LSWPNPAAYAAEAKKGFLPVTDKKDGYSFLYPFGWQEVVVQGQDKVYKDVI----EPLES 132
Query: 147 SSVSVVITG------LGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVAAKLIDCKAS 200
SV+ + T LGP D + L R P KL++ K +
Sbjct: 133 VSVNTIPTSKQDIRELGP--------------PDQVAEALIRKVLAAPTQKTKLMEAKEN 178
Query: 201 ----KGFYYIEYTLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEK 256
+ +Y E+T Q P +R H AI +A NG + YT+T E EK +
Sbjct: 179 DVDGRTYYTFEFTAQAPNFTR-HALGAIAIA-NG---KFYTLTTGANERRWEKIKDRLHT 233
Query: 257 AVASFRF 263
V SF+
Sbjct: 234 VVDSFKI 240
>gi|412988572|emb|CCO17908.1| predicted protein [Bathycoccus prasinos]
Length = 279
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 24/176 (13%)
Query: 98 ALAANEDLRVYTDELNKFEISIPQDWQL--GAGEPNGFKSITAFYPQEASSSSVSVVITG 155
A A L Y DE N F +S P +W L AG FK+ + Y +S+ V +T
Sbjct: 111 AFADEMTLTEYVDETNNFHLSYPTEWVLEKKAGATALFKNPSVKY------ASIGVTVTP 164
Query: 156 LGPDFTRMESFGKVEAFADTLVSGLDRSWRRPPGVA-------AKLIDCKASKGFYYIEY 208
+ D ++ FG +E LV + PG + +D K + FY EY
Sbjct: 165 VRID--SLKEFGSLEDIGAKLVEAESKKQTTVPGGTFMERQSERESVDTKTT--FYEYEY 220
Query: 209 TLQNPGESRKHLFSAIGMASNGWYNRLYTVTGQFVEEESEKYGSNIEKAVASFRFI 264
L K +++ +G+ L+ V Q E E EK A +R +
Sbjct: 221 RLITT-HGNKRVYNYVGVRDRT----LFIVNAQAYEIEEGGESEADEKTRALYREV 271
>gi|22299618|ref|NP_682865.1| photosystem II oxygen-evolving complex 23K protein PsbP-like
protein [Thermosynechococcus elongatus BP-1]
gi|22295802|dbj|BAC09627.1| psbP [Thermosynechococcus elongatus BP-1]
Length = 183
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
Query: 81 MFQLAF-TACSFPAIVSYALAANEDLRVYTDELNKFEISIPQDW-QLGAGEPNGFKSITA 138
M Q F TA + ++ +A L+ Y D + +E P+ W Q+ +P
Sbjct: 1 MLQRFFATALAIFVVLLGGCSATSGLQAYVDSYDGYEFLYPRGWVQVQVEDPVD----VV 56
Query: 139 FYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADTLVSGLDRSWRRP--PGVAAKLID 196
F+ ++ +VSVV+ + +E G E D L+ R+ P G ++ LI
Sbjct: 57 FHDIIETTENVSVVVNTVAST-KSLEELGSPEEVGDRLL----RNIIAPSESGRSSALIA 111
Query: 197 CKASKG----FYYIEYTLQNPGES----RKHLFSAIGMASNGWYNRLYTVTGQFVEEESE 248
+ K +Y +EY + PG+ ++H S+I ++ ++YT++ EE
Sbjct: 112 ATSQKADDKTYYILEYAVTLPGDGNTAQQRHNLSSIAVSR----GKVYTLSVSAPEERWP 167
Query: 249 KYGSNIEKAVASF 261
K + V+SF
Sbjct: 168 KVEDQFKTIVSSF 180
>gi|443716926|gb|ELU08219.1| hypothetical protein CAPTEDRAFT_197539 [Capitella teleta]
Length = 457
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 134 KSITAFYPQEASSSSVSVVITGLGPDFTRMESFGKVEAFADT 175
K + + P AS S + ++T +GPD TR S G+ AF+DT
Sbjct: 198 KLVLGYLPSPASDSGAASILTLVGPDSTRRMSRGRYSAFSDT 239
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.130 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,082,785,791
Number of Sequences: 23463169
Number of extensions: 166953146
Number of successful extensions: 378411
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 378306
Number of HSP's gapped (non-prelim): 75
length of query: 264
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 124
effective length of database: 9,074,351,707
effective search space: 1125219611668
effective search space used: 1125219611668
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)