Query 024711
Match_columns 264
No_of_seqs 344 out of 1913
Neff 7.4
Searched_HMMs 13730
Date Mon Mar 25 13:06:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024711.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024711hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cqda1 d.58.7.1 (A:1-103) RNA 99.9 5.8E-24 4.2E-28 160.9 12.9 88 24-111 3-90 (103)
2 d2cqga1 d.58.7.1 (A:96-185) TA 99.9 5.9E-23 4.3E-27 151.7 11.2 84 28-112 5-88 (90)
3 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.9 7.5E-23 5.5E-27 149.1 10.9 81 28-108 3-83 (84)
4 d1uawa_ d.58.7.1 (A:) Musashi- 99.9 2.7E-23 2E-27 149.2 6.9 76 32-107 1-76 (77)
5 d1x0fa1 d.58.7.1 (A:183-257) N 99.9 4.4E-23 3.2E-27 147.3 8.0 75 33-107 1-75 (75)
6 d1whwa_ d.58.7.1 (A:) Probable 99.9 2.5E-22 1.8E-26 150.5 12.0 83 29-111 6-89 (99)
7 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 1.8E-22 1.3E-26 146.0 9.2 79 31-109 2-81 (82)
8 d1hd0a_ d.58.7.1 (A:) Heteroge 99.9 1.7E-22 1.2E-26 144.0 8.9 75 33-107 1-75 (75)
9 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 2.4E-22 1.7E-26 147.6 10.0 84 27-110 3-87 (88)
10 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 4.2E-22 3.1E-26 147.8 11.3 82 29-110 5-87 (93)
11 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 3.6E-22 2.6E-26 148.1 10.9 83 29-111 7-90 (93)
12 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 4.5E-22 3.3E-26 143.4 11.1 76 33-108 2-78 (80)
13 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 1.3E-21 9.7E-26 155.1 14.9 85 29-113 40-125 (139)
14 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 9.4E-23 6.8E-27 150.0 7.1 83 30-112 4-87 (89)
15 d2cpza1 d.58.7.1 (A:383-484) C 99.9 4.4E-22 3.2E-26 150.1 10.7 84 30-113 17-101 (102)
16 d2u2fa_ d.58.7.1 (A:) Splicing 99.9 4.4E-22 3.2E-26 145.3 10.1 79 32-110 2-81 (85)
17 d1x4ba1 d.58.7.1 (A:8-110) Het 99.9 2.7E-22 1.9E-26 151.7 8.8 83 29-111 18-100 (103)
18 d1l3ka2 d.58.7.1 (A:103-181) N 99.9 9.4E-22 6.8E-26 141.1 10.9 78 30-107 1-78 (79)
19 d1b7fa2 d.58.7.1 (A:205-289) S 99.9 1E-21 7.4E-26 143.1 10.9 80 28-107 3-85 (85)
20 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 8.8E-22 6.4E-26 145.0 10.2 82 29-110 6-88 (90)
21 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 1.4E-21 9.9E-26 141.2 10.1 78 32-109 3-81 (82)
22 d1p1ta_ d.58.7.1 (A:) Cleavage 99.9 3.4E-22 2.5E-26 151.0 6.9 87 25-111 2-89 (104)
23 d1fxla2 d.58.7.1 (A:119-203) H 99.9 1.9E-21 1.4E-25 141.8 10.5 78 30-107 5-85 (85)
24 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 1.2E-21 8.6E-26 144.1 9.1 83 30-112 4-87 (90)
25 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 2.6E-22 1.9E-26 151.3 4.7 81 29-109 16-96 (101)
26 d2cpha1 d.58.7.1 (A:454-547) P 99.8 2.4E-21 1.8E-25 143.9 9.9 83 29-111 6-91 (94)
27 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 1.9E-21 1.4E-25 140.9 8.7 79 34-112 1-81 (83)
28 d2cqca1 d.58.7.1 (A:109-191) A 99.8 2.8E-21 2E-25 140.0 9.0 76 29-104 7-83 (83)
29 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 9.6E-21 7E-25 142.8 12.2 83 29-112 13-96 (104)
30 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 5.8E-21 4.2E-25 140.6 10.2 83 27-111 4-87 (90)
31 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 6.1E-21 4.4E-25 140.2 10.3 80 31-112 8-88 (89)
32 d2msta_ d.58.7.1 (A:) Neural R 99.8 3.3E-21 2.4E-25 136.7 7.9 75 33-107 1-75 (75)
33 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 4.3E-21 3.2E-25 137.6 8.6 75 33-108 2-77 (78)
34 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 6.7E-21 4.9E-25 141.8 9.5 85 26-110 3-94 (98)
35 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 6.7E-21 4.9E-25 138.5 9.2 76 34-109 1-80 (85)
36 d2cpea1 d.58.7.1 (A:353-453) R 99.8 7.2E-21 5.2E-25 142.5 9.5 89 24-112 1-98 (101)
37 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 3E-20 2.2E-24 140.3 13.0 85 28-112 12-96 (104)
38 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 3E-20 2.2E-24 137.5 11.9 82 27-110 7-89 (93)
39 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 5.4E-21 3.9E-25 137.8 7.4 79 31-109 1-80 (81)
40 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 1.3E-20 9.5E-25 137.6 7.8 80 30-109 3-84 (86)
41 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 3.1E-20 2.2E-24 139.5 9.1 90 18-108 5-95 (101)
42 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 7.7E-20 5.6E-24 133.2 10.9 78 30-108 5-82 (85)
43 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 7.4E-20 5.4E-24 136.8 10.8 76 27-110 11-88 (98)
44 d1weza_ d.58.7.1 (A:) Heteroge 99.8 9.4E-20 6.8E-24 137.1 11.0 83 27-111 11-93 (102)
45 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 1.1E-19 8E-24 135.1 10.9 83 31-113 1-88 (96)
46 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 3.3E-21 2.4E-25 142.4 2.4 82 27-109 9-90 (91)
47 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 6.2E-20 4.5E-24 134.4 7.8 77 29-111 3-79 (88)
48 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 2.5E-20 1.8E-24 139.9 5.3 84 29-112 16-100 (102)
49 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 2.7E-19 2E-23 132.7 10.3 79 29-110 12-91 (95)
50 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 2.9E-19 2.1E-23 127.1 9.5 74 32-107 1-74 (75)
51 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 3.4E-19 2.5E-23 136.3 10.4 78 29-109 5-83 (114)
52 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 2.8E-19 2E-23 132.9 8.9 81 27-112 12-93 (96)
53 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 4.7E-19 3.4E-23 131.9 9.2 74 30-109 17-91 (96)
54 d2cpja1 d.58.7.1 (A:65-150) No 99.8 8E-19 5.8E-23 128.0 9.2 75 30-110 7-82 (86)
55 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 3.5E-19 2.6E-23 129.6 7.2 78 30-107 8-86 (86)
56 d2cpya1 d.58.7.1 (A:536-638) R 99.8 1.4E-19 1E-23 136.2 4.7 83 28-110 5-87 (103)
57 d2adca1 d.58.7.1 (A:335-443) P 99.8 1.5E-18 1.1E-22 131.5 10.4 75 31-110 2-78 (109)
58 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 2E-18 1.5E-22 124.8 10.4 77 27-108 4-82 (83)
59 d2cpda1 d.58.7.1 (A:223-308) A 99.8 7.9E-19 5.8E-23 127.7 8.2 79 27-111 4-83 (86)
60 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 1.8E-19 1.3E-23 126.8 4.5 70 34-103 1-71 (72)
61 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 3.1E-19 2.2E-23 128.4 5.8 75 32-112 2-78 (80)
62 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 1.5E-18 1.1E-22 129.6 9.4 78 27-111 11-89 (98)
63 d2cpia1 d.58.7.1 (A:101-189) E 99.8 4.7E-19 3.4E-23 130.0 6.3 77 29-105 6-89 (89)
64 d1wexa_ d.58.7.1 (A:) Heteroge 99.7 1.2E-17 8.6E-22 125.8 13.5 79 28-112 12-93 (104)
65 d1whya_ d.58.7.1 (A:) Putative 99.7 7E-18 5.1E-22 125.5 11.7 75 29-109 15-92 (97)
66 d1whxa_ d.58.7.1 (A:) Probable 99.7 2.6E-18 1.9E-22 130.4 9.4 76 30-111 9-85 (111)
67 d1wela1 d.58.7.1 (A:412-523) R 99.7 2.4E-18 1.7E-22 131.4 8.2 83 28-110 15-97 (112)
68 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.7 3.3E-18 2.4E-22 122.6 8.2 72 30-109 4-76 (79)
69 d3begb1 d.58.7.1 (B:121-207) S 99.7 1.2E-18 8.5E-23 127.3 5.6 72 32-110 1-73 (87)
70 d1u1qa_ d.58.7.1 (A:) Nuclear 99.7 8.5E-18 6.2E-22 137.6 11.1 84 27-110 93-176 (183)
71 d2adba1 d.58.7.1 (A:177-284) P 99.7 5.4E-18 4E-22 128.5 9.1 80 28-111 4-86 (108)
72 d1wg1a_ d.58.7.1 (A:) Probable 99.7 3.2E-18 2.4E-22 125.2 7.2 73 31-110 5-78 (88)
73 d1nu4a_ d.58.7.1 (A:) Spliceso 99.7 3.9E-18 2.8E-22 125.4 7.3 78 30-110 2-84 (91)
74 d2adca2 d.58.7.1 (A:444-531) P 99.7 1.3E-17 9.2E-22 121.7 10.0 76 30-109 9-86 (88)
75 d2cq1a1 d.58.7.1 (A:51-138) Po 99.7 2.2E-17 1.6E-21 120.4 10.2 79 27-111 4-85 (88)
76 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.7 1.8E-17 1.3E-21 117.6 8.4 70 34-110 1-71 (75)
77 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 3.2E-17 2.3E-21 122.4 8.7 77 28-110 15-95 (99)
78 d1u2fa_ d.58.7.1 (A:) Splicing 99.7 7.5E-19 5.5E-23 128.9 -0.7 77 31-107 1-82 (90)
79 d1weya_ d.58.7.1 (A:) Calcipre 99.7 9.9E-17 7.2E-21 120.9 8.6 78 29-112 3-86 (104)
80 d1x4da1 d.58.7.1 (A:8-96) Matr 99.6 2E-16 1.4E-20 115.8 7.6 76 28-109 5-84 (89)
81 d1u1qa_ d.58.7.1 (A:) Nuclear 99.6 6.6E-16 4.8E-20 126.1 9.6 81 30-110 5-85 (183)
82 d1jmta_ d.58.7.3 (A:) d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=5.8e-24 Score=160.86 Aligned_cols=88 Identities=60% Similarity=1.043 Sum_probs=81.8
Q ss_pred CCCCCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeE
Q 024711 24 SPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRAN 103 (264)
Q Consensus 24 ~~~~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~ 103 (264)
.+..+.+.++|||+|||++++|++|+++|++||+|++|+|++|+.|+++||||||+|.+.++|++||+.++++|+|++|+
T Consensus 3 ~~~~d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~~l~Gr~l~ 82 (103)
T d2cqda1 3 GSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKAN 82 (103)
T ss_dssp CCCCSCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCEETTEECE
T ss_pred CCCCCCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCCcCCCEEEE
Confidence 34566778899999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred EEeccCCC
Q 024711 104 CNLASLGR 111 (264)
Q Consensus 104 V~~a~~~~ 111 (264)
|++|..+.
T Consensus 83 V~~a~~~~ 90 (103)
T d2cqda1 83 VNLAYLGA 90 (103)
T ss_dssp EEESTTTC
T ss_pred EEEcCCCC
Confidence 99997543
No 2
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=5.9e-23 Score=151.67 Aligned_cols=84 Identities=36% Similarity=0.678 Sum_probs=77.2
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
....++|||+|||+++||++|+++|++||.|++|+|++|+.||++||||||+|.+.++|++||+.++ .|+|+.|.|++|
T Consensus 5 ~~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~~-~l~Gr~i~v~~a 83 (90)
T d2cqga1 5 VQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRH-MIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSCE-EETTEEEEEECC
T ss_pred CcCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcCC-ccCCEEeEEEeC
Confidence 3456799999999999999999999999999999999999999999999999999999999999654 799999999999
Q ss_pred cCCCC
Q 024711 108 SLGRP 112 (264)
Q Consensus 108 ~~~~~ 112 (264)
..++.
T Consensus 84 ~~k~~ 88 (90)
T d2cqga1 84 NSKQS 88 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 76543
No 3
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=7.5e-23 Score=149.11 Aligned_cols=81 Identities=38% Similarity=0.643 Sum_probs=76.7
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
.+..++|||+|||+++|+++|+++|++||.|.+++|++|+.+|++||||||+|.+.++|++||+.+++.|+|+.|+|+.|
T Consensus 3 pe~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 3 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRA 82 (84)
T ss_dssp CGGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEECEEEEC
T ss_pred CCCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHHhCCCEECCEEEEEEee
Confidence 34568999999999999999999999999999999999999999999999999999999999998888899999999988
Q ss_pred c
Q 024711 108 S 108 (264)
Q Consensus 108 ~ 108 (264)
.
T Consensus 83 ~ 83 (84)
T d1l3ka1 83 V 83 (84)
T ss_dssp C
T ss_pred e
Confidence 4
No 4
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=2.7e-23 Score=149.15 Aligned_cols=76 Identities=39% Similarity=0.759 Sum_probs=73.4
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
|+|||+|||+++||++|+++|++||.|++++|++|+.|+++||||||+|.+.++|++||+.+++.|+||.|+|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHHcCCCEECCeEEEEEEC
Confidence 6899999999999999999999999999999999999999999999999999999999998778899999999987
No 5
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=4.4e-23 Score=147.31 Aligned_cols=75 Identities=31% Similarity=0.581 Sum_probs=72.5
Q ss_pred EEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 33 KVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 33 ~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
+|||+|||+++||++|+++|++||.|++|+|++|+.|+++||||||+|.+.++|++||+.++++|+|+.|+|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTCSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhhCCCEECCEEeEEEEC
Confidence 699999999999999999999999999999999999999999999999999999999998888999999999876
No 6
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=2.5e-22 Score=150.54 Aligned_cols=83 Identities=27% Similarity=0.463 Sum_probs=77.0
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEec
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLA 107 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a 107 (264)
...++|||+||++++++++|+++|++||.|++|+|++|+.+++++|||||+|.+.++|++||+.++ ..|+|+.|+|++|
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 346789999999999999999999999999999999999999999999999999999999999865 6699999999999
Q ss_pred cCCC
Q 024711 108 SLGR 111 (264)
Q Consensus 108 ~~~~ 111 (264)
..++
T Consensus 86 ~~~~ 89 (99)
T d1whwa_ 86 TIKK 89 (99)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 7654
No 7
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.87 E-value=1.8e-22 Score=145.97 Aligned_cols=79 Identities=24% Similarity=0.326 Sum_probs=74.5
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCCceeEEEeccC
Q 024711 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDGRRANCNLASL 109 (264)
Q Consensus 31 ~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~Gr~l~V~~a~~ 109 (264)
+++|||+|||.++|+++|+++|++||.|++|+|++|+.+++++|||||+|.+.++|++||+.+ +..|+|++|+|++|++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 578999999999999999999999999999999999999999999999999999999999885 4669999999999954
No 8
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.7e-22 Score=144.04 Aligned_cols=75 Identities=35% Similarity=0.773 Sum_probs=71.7
Q ss_pred EEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 33 KVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 33 ~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
+|||+|||+++||++|+++|++||+|++|+|++|+.|+++||||||+|.+.++|++||+.++..|+|+.|+|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHHTCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHhcCCCEECCCEEEeeEC
Confidence 599999999999999999999999999999999999999999999999999999999998778899999999754
No 9
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.87 E-value=2.4e-22 Score=147.56 Aligned_cols=84 Identities=24% Similarity=0.295 Sum_probs=76.9
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCCceeEEE
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDGRRANCN 105 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~Gr~l~V~ 105 (264)
...+.++|||+||+.++|+++|+++|++||+|++|+|++|+.+|++||||||+|.+.++|++||+.+ +..|+|+.|+|+
T Consensus 3 ~s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~ 82 (88)
T d1rk8a_ 3 RSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVD 82 (88)
T ss_dssp CCC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 3456789999999999999999999999999999999999999999999999999999999999884 466999999999
Q ss_pred eccCC
Q 024711 106 LASLG 110 (264)
Q Consensus 106 ~a~~~ 110 (264)
+|..+
T Consensus 83 ~a~~k 87 (88)
T d1rk8a_ 83 WCFVK 87 (88)
T ss_dssp ESEEC
T ss_pred EecCC
Confidence 99654
No 10
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=4.2e-22 Score=147.76 Aligned_cols=82 Identities=21% Similarity=0.277 Sum_probs=76.5
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEec
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLA 107 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a 107 (264)
..+++|||+|||+++||++|+++|++||.|++|+|++|+.++++||||||+|.+.++|++||+.++ ..|+|+.|+|+||
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 467899999999999999999999999999999999999999999999999999999999998855 6699999999998
Q ss_pred cCC
Q 024711 108 SLG 110 (264)
Q Consensus 108 ~~~ 110 (264)
...
T Consensus 85 ~~~ 87 (93)
T d1h2vz_ 85 AGF 87 (93)
T ss_dssp SCC
T ss_pred CCC
Confidence 643
No 11
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=3.6e-22 Score=148.13 Aligned_cols=83 Identities=29% Similarity=0.386 Sum_probs=76.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEec
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLA 107 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a 107 (264)
...++|||+|||.++|+++|+++|++||.|++|+|++|+.|+++||||||+|.+.++|++||+.++ ..|+|+.|+|++|
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 345799999999999999999999999999999999999999999999999999999999998865 6699999999999
Q ss_pred cCCC
Q 024711 108 SLGR 111 (264)
Q Consensus 108 ~~~~ 111 (264)
..++
T Consensus 87 ~~~~ 90 (93)
T d1x5ua1 87 SAHN 90 (93)
T ss_dssp TTTS
T ss_pred CCCC
Confidence 6543
No 12
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=4.5e-22 Score=143.45 Aligned_cols=76 Identities=29% Similarity=0.438 Sum_probs=72.8
Q ss_pred EEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEecc
Q 024711 33 KVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLAS 108 (264)
Q Consensus 33 ~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~ 108 (264)
+|||+||+.++||++|+++|++||+|.+|+|++|+.|++++|||||+|.+.++|++||+.++ ..|+|++|+|++|+
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 79999999999999999999999999999999999999999999999999999999999865 56999999999985
No 13
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.87 E-value=1.3e-21 Score=155.08 Aligned_cols=85 Identities=28% Similarity=0.476 Sum_probs=77.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEec
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLA 107 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a 107 (264)
...++|||+||++++||++|+++|++||+|++|+|++|+.|+++||||||+|.+.++|++||+.++ .+|+|++|+|++|
T Consensus 40 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a 119 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALA 119 (139)
T ss_dssp TTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 345789999999999999999999999999999999999999999999999999999999999855 6699999999999
Q ss_pred cCCCCC
Q 024711 108 SLGRPR 113 (264)
Q Consensus 108 ~~~~~~ 113 (264)
..+..+
T Consensus 120 ~~~~~~ 125 (139)
T d1u6fa1 120 ASGHQR 125 (139)
T ss_dssp SCCCCC
T ss_pred CCCCCC
Confidence 765443
No 14
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=9.4e-23 Score=150.02 Aligned_cols=83 Identities=31% Similarity=0.437 Sum_probs=76.8
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCCceeEEEecc
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDGRRANCNLAS 108 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~Gr~l~V~~a~ 108 (264)
+.++|||+|||+++|+++|+++|++||+|++|+|++|+.++++||||||+|.+.++|++||+.+ +..|+|+.|+|++|.
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 4579999999999999999999999999999999999999999999999999999999999885 466999999999997
Q ss_pred CCCC
Q 024711 109 LGRP 112 (264)
Q Consensus 109 ~~~~ 112 (264)
+++.
T Consensus 84 p~~~ 87 (89)
T d2cqba1 84 PMRI 87 (89)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 5543
No 15
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=4.4e-22 Score=150.10 Aligned_cols=84 Identities=26% Similarity=0.367 Sum_probs=77.3
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEecc
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLAS 108 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~ 108 (264)
..++|||+|||++++|++|+++|++||.|.++++++|+.++++||||||+|.+.++|++||+.++ ..|+|++|+|++|.
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 34689999999999999999999999999999999999999999999999999999999998854 66999999999997
Q ss_pred CCCCC
Q 024711 109 LGRPR 113 (264)
Q Consensus 109 ~~~~~ 113 (264)
++..+
T Consensus 97 ~k~~~ 101 (102)
T d2cpza1 97 SKNDS 101 (102)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 66543
No 16
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=4.4e-22 Score=145.26 Aligned_cols=79 Identities=25% Similarity=0.452 Sum_probs=74.6
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEeccCC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLASLG 110 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~~~ 110 (264)
.+|||+|||+++||++|+++|++||+|++|+|++|+.||++||||||+|.+.++|++||+.++ ..|+|++|+|++|...
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 589999999999999999999999999999999999999999999999999999999999865 6799999999999643
No 17
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2.7e-22 Score=151.74 Aligned_cols=83 Identities=37% Similarity=0.672 Sum_probs=77.6
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEecc
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLAS 108 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a~ 108 (264)
...++|||+|||+++++++|+++|++||+|+++.|++|+.++++||||||+|.+.++|++||+.+++.|+|+.|.|++|.
T Consensus 18 ~~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 18 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HHHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCSEEETTEEEEEECCS
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHHhCCCeECCEEEEEEECc
Confidence 34589999999999999999999999999999999999999999999999999999999999887788999999999987
Q ss_pred CCC
Q 024711 109 LGR 111 (264)
Q Consensus 109 ~~~ 111 (264)
+++
T Consensus 98 ~ke 100 (103)
T d1x4ba1 98 ARE 100 (103)
T ss_dssp SCC
T ss_pred ccC
Confidence 654
No 18
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=9.4e-22 Score=141.14 Aligned_cols=78 Identities=31% Similarity=0.650 Sum_probs=74.5
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
+.++|||+|||+++||++|+++|++||.|.+++++.|+.+++++|||||+|.+.|+|++|++.++++|+|+.|+|+.|
T Consensus 1 t~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 1 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CCSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHCSCCEETTEECEEEEC
T ss_pred CCCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHHhCCCEECCEEEEEEEC
Confidence 468999999999999999999999999999999999999999999999999999999999988778899999999976
No 19
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.86 E-value=1e-21 Score=143.11 Aligned_cols=80 Identities=25% Similarity=0.467 Sum_probs=73.6
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCC--ceeEE
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDG--RRANC 104 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~G--r~l~V 104 (264)
+.+.++|||+|||++++|++|+++|++||.|++|+|++|+.++++||||||+|.+.++|++||+.++ ..+.| ++|+|
T Consensus 3 ~~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V 82 (85)
T d1b7fa2 3 SIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 82 (85)
T ss_dssp TTTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEE
Confidence 4567789999999999999999999999999999999999999999999999999999999999854 55765 88999
Q ss_pred Eec
Q 024711 105 NLA 107 (264)
Q Consensus 105 ~~a 107 (264)
++|
T Consensus 83 ~~A 85 (85)
T d1b7fa2 83 RLA 85 (85)
T ss_dssp EEC
T ss_pred EEC
Confidence 987
No 20
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=8.8e-22 Score=145.03 Aligned_cols=82 Identities=29% Similarity=0.398 Sum_probs=76.3
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEec
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLA 107 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a 107 (264)
.+.++|||+||+.++++++|+++|++||.|++|+|++|+.++++||||||+|.+.++|++||+.++ ..|+|++|+|++|
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 356799999999999999999999999999999999999999999999999999999999999866 5699999999999
Q ss_pred cCC
Q 024711 108 SLG 110 (264)
Q Consensus 108 ~~~ 110 (264)
+++
T Consensus 86 kp~ 88 (90)
T d2cq0a1 86 KPS 88 (90)
T ss_dssp SCC
T ss_pred eCC
Confidence 643
No 21
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.4e-21 Score=141.18 Aligned_cols=78 Identities=29% Similarity=0.457 Sum_probs=73.5
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhC-CCCCcCCceeEEEeccC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACAD-PTPFIDGRRANCNLASL 109 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~-~~~~i~Gr~l~V~~a~~ 109 (264)
++|||+|||.+++|++|+++|++||.|++|+|++|..+++++|||||+|.+.++|++||+. ++..|+|++|+|++|++
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 5799999999999999999999999999999999999999999999999999999999988 45679999999999853
No 22
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=3.4e-22 Score=151.02 Aligned_cols=87 Identities=28% Similarity=0.547 Sum_probs=79.0
Q ss_pred CCCCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeE
Q 024711 25 PFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRAN 103 (264)
Q Consensus 25 ~~~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~ 103 (264)
|..+...++|||+||+++++|++|+++|++||+|++|+|++|+.||+++|||||+|.+.++|++||+.++ ..|+|+.|+
T Consensus 2 P~~~~~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~ 81 (104)
T d1p1ta_ 2 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 81 (104)
T ss_dssp CCSHHHHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBE
T ss_pred CCCCCCCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 3445566899999999999999999999999999999999999999999999999999999999998855 669999999
Q ss_pred EEeccCCC
Q 024711 104 CNLASLGR 111 (264)
Q Consensus 104 V~~a~~~~ 111 (264)
|++|..++
T Consensus 82 V~~a~~~~ 89 (104)
T d1p1ta_ 82 VDNAASEK 89 (104)
T ss_dssp EEETTCTT
T ss_pred EEECCCCC
Confidence 99997543
No 23
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.9e-21 Score=141.80 Aligned_cols=78 Identities=24% Similarity=0.446 Sum_probs=72.0
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCC--ceeEEEe
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDG--RRANCNL 106 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~G--r~l~V~~ 106 (264)
+.++|||+|||.++||++|+++|++||+|++|+|++|+.++++||||||+|.+.++|++||+.+ +..++| ++|+|++
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 4578999999999999999999999999999999999999999999999999999999999885 466887 5699988
Q ss_pred c
Q 024711 107 A 107 (264)
Q Consensus 107 a 107 (264)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 24
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.2e-21 Score=144.13 Aligned_cols=83 Identities=35% Similarity=0.657 Sum_probs=76.9
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhC-CCCCcCCceeEEEecc
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACAD-PTPFIDGRRANCNLAS 108 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~-~~~~i~Gr~l~V~~a~ 108 (264)
+.++|||+|||+++++++|+++|++||.|+++++++++.+++++|||||+|.+.++|++||+. ++..|+|++|+|++|.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 567899999999999999999999999999999999999999999999999999999999988 4577999999999997
Q ss_pred CCCC
Q 024711 109 LGRP 112 (264)
Q Consensus 109 ~~~~ 112 (264)
++..
T Consensus 84 ~~~~ 87 (90)
T d1x5sa1 84 KSSD 87 (90)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 25
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2.6e-22 Score=151.30 Aligned_cols=81 Identities=22% Similarity=0.313 Sum_probs=75.2
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEecc
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLAS 108 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a~ 108 (264)
.+.++|||+||+.+++|++|+++|+.||+|.+|+|++|+.+|++||||||+|.+.++|++||+.++..|+|+.|+|+++.
T Consensus 16 ~~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 16 RDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HHHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTTEEETTEEEEEEEHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHHHCCCEECCEEEEEEECC
Confidence 35679999999999999999999999999999999999999999999999999999999999755567999999999985
Q ss_pred C
Q 024711 109 L 109 (264)
Q Consensus 109 ~ 109 (264)
.
T Consensus 96 ~ 96 (101)
T d2cq4a1 96 A 96 (101)
T ss_dssp H
T ss_pred C
Confidence 3
No 26
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=2.4e-21 Score=143.88 Aligned_cols=83 Identities=25% Similarity=0.457 Sum_probs=75.3
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCC-CCCccceEEEEeCCHHHHHHHHhCC-C-CCcCCceeEEE
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKN-TGRSKGYGFVTFREPEAARRACADP-T-PFIDGRRANCN 105 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~-tg~skG~gFV~F~~~e~A~~Ai~~~-~-~~i~Gr~l~V~ 105 (264)
...++|||+|||.+++|++|+++|++||.|++|+|++|.. +|++||||||+|.+.++|++||+.+ + ..|+|++|+|+
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~ 85 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLE 85 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEE
Confidence 4567899999999999999999999999999999998854 7999999999999999999999874 4 56999999999
Q ss_pred eccCCC
Q 024711 106 LASLGR 111 (264)
Q Consensus 106 ~a~~~~ 111 (264)
+|..+.
T Consensus 86 ~A~~~~ 91 (94)
T d2cpha1 86 WADSEV 91 (94)
T ss_dssp ECCCCC
T ss_pred EcCCCC
Confidence 997553
No 27
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.9e-21 Score=140.87 Aligned_cols=79 Identities=28% Similarity=0.482 Sum_probs=72.5
Q ss_pred EEEcCCCCCCCHHHHHHHhhcCCCEEEE-EEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEeccCCC
Q 024711 34 VFVGGLAWETQSETMRRYFEQFGEILEA-VVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLASLGR 111 (264)
Q Consensus 34 lfVgnLp~~vte~~L~~~F~~fG~I~~v-~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~~~~ 111 (264)
|||+|||.++||++|+++|++||.|.++ +|++|+.+++++|||||+|.+.++|++||+.++ ..|+|++|+|++|.+++
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 8999999999999999999999999775 789999999999999999999999999999865 66999999999997654
Q ss_pred C
Q 024711 112 P 112 (264)
Q Consensus 112 ~ 112 (264)
.
T Consensus 81 ~ 81 (83)
T d1x5ta1 81 S 81 (83)
T ss_dssp C
T ss_pred c
Confidence 3
No 28
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2.8e-21 Score=140.04 Aligned_cols=76 Identities=28% Similarity=0.466 Sum_probs=71.1
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEE
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANC 104 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V 104 (264)
...++|||+||+.++||++|+++|++||.|++|+|++|+.+++++|||||+|.+.++|++||+.++ ..|+|++|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 346789999999999999999999999999999999999999999999999999999999998854 6699999987
No 29
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=9.6e-21 Score=142.82 Aligned_cols=83 Identities=18% Similarity=0.404 Sum_probs=72.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecC-CCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDK-NTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~-~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
...++|||+||++++||++|+++|++|| |++++++.++ .+++++|||||+|.+.++|++|++.++..|+|+.|+|++|
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHGGGTCEETTEECEEEEC
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 3468999999999999999999999998 7788877765 4789999999999999999988876667899999999999
Q ss_pred cCCCC
Q 024711 108 SLGRP 112 (264)
Q Consensus 108 ~~~~~ 112 (264)
..++.
T Consensus 92 ~~~~~ 96 (104)
T d1wi8a_ 92 DQAQD 96 (104)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 65543
No 30
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=5.8e-21 Score=140.57 Aligned_cols=83 Identities=25% Similarity=0.344 Sum_probs=74.2
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEE
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCN 105 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~ 105 (264)
++.+.++|||+|||.++||++|+++|++||.|++|+|++|+.+ .+|||||+|.+.++|++||+.++ ..|.|+.|+|.
T Consensus 4 d~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~--~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~ 81 (90)
T d2cqia1 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVN 81 (90)
T ss_dssp CSCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCS--SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCc--cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 4556789999999999999999999999999999999999754 38999999999999999999855 56999999999
Q ss_pred eccCCC
Q 024711 106 LASLGR 111 (264)
Q Consensus 106 ~a~~~~ 111 (264)
+|.++.
T Consensus 82 ~a~~~~ 87 (90)
T d2cqia1 82 WATTPS 87 (90)
T ss_dssp ECCCTT
T ss_pred EcCCCC
Confidence 996544
No 31
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=6.1e-21 Score=140.15 Aligned_cols=80 Identities=29% Similarity=0.477 Sum_probs=72.8
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEeccC
Q 024711 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLASL 109 (264)
Q Consensus 31 ~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~~ 109 (264)
.++|||+|||+++|+++|+++|++||.|++|+|++|+ +.++|||||+|++.++|++||+.++ ..|+|++|+|++|.+
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~ 85 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 85 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 4689999999999999999999999999999999996 4578999999999999999999866 669999999999976
Q ss_pred CCC
Q 024711 110 GRP 112 (264)
Q Consensus 110 ~~~ 112 (264)
++.
T Consensus 86 ~~~ 88 (89)
T d1cvja2 86 RKE 88 (89)
T ss_dssp TTT
T ss_pred CCC
Confidence 543
No 32
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=3.3e-21 Score=136.68 Aligned_cols=75 Identities=39% Similarity=0.754 Sum_probs=71.8
Q ss_pred EEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 33 KVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 33 ~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
+|||+|||.++||++|+++|++||.|..+.+++++.+++++|||||+|.+.++|++||+.+++.|+|++|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHHCSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHhcCCCEECCeEEEEEEC
Confidence 599999999999999999999999999999999999999999999999999999999986678899999999986
No 33
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=4.3e-21 Score=137.60 Aligned_cols=75 Identities=29% Similarity=0.460 Sum_probs=71.1
Q ss_pred EEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhC-CCCCcCCceeEEEecc
Q 024711 33 KVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACAD-PTPFIDGRRANCNLAS 108 (264)
Q Consensus 33 ~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~-~~~~i~Gr~l~V~~a~ 108 (264)
+|||+|||++++|++|+++|++||.|++|+|.+|+ +++++|||||+|.+.++|++||+. ++..++|++|+|++|.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 79999999999999999999999999999999997 799999999999999999999998 4577999999999985
No 34
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=6.7e-21 Score=141.84 Aligned_cols=85 Identities=28% Similarity=0.446 Sum_probs=76.5
Q ss_pred CCCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-------CCcC
Q 024711 26 FGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-------PFID 98 (264)
Q Consensus 26 ~~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-------~~i~ 98 (264)
.+..+.++|||+|||+++||++|+++|++||.|.+++++.++.+++++|||||+|.+.++|++||+.++ ..|+
T Consensus 3 ~~~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~ 82 (98)
T d1x4ha1 3 SDVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLD 82 (98)
T ss_dssp CCCCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESS
T ss_pred cCCCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEEC
Confidence 345567899999999999999999999999999999999999999999999999999999999998643 3489
Q ss_pred CceeEEEeccCC
Q 024711 99 GRRANCNLASLG 110 (264)
Q Consensus 99 Gr~l~V~~a~~~ 110 (264)
|++|+|++|..+
T Consensus 83 gr~l~v~~a~~k 94 (98)
T d1x4ha1 83 GRQLKVDLAVTR 94 (98)
T ss_dssp SCEEEEECCCCC
T ss_pred CEEEEEEECCCC
Confidence 999999999654
No 35
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=6.7e-21 Score=138.54 Aligned_cols=76 Identities=28% Similarity=0.560 Sum_probs=70.0
Q ss_pred EEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCC---CccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEeccC
Q 024711 34 VFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTG---RSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLASL 109 (264)
Q Consensus 34 lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg---~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~~ 109 (264)
|||+|||+++|+++|+++|++||.|++|+|++|+.++ ++||||||+|.+.++|++||+.++ ..|+|++|+|++|.+
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 8999999999999999999999999999999987665 579999999999999999998855 679999999999853
No 36
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=7.2e-21 Score=142.52 Aligned_cols=89 Identities=25% Similarity=0.392 Sum_probs=79.2
Q ss_pred CCCCCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEE--------EEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-C
Q 024711 24 SPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEIL--------EAVVITDKNTGRSKGYGFVTFREPEAARRACADP-T 94 (264)
Q Consensus 24 ~~~~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~--------~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~ 94 (264)
+|+++.+.++|||+||+.++||++|+++|+.||.|. .+.+.+|+.+++++|||||+|.+.++|++||+.+ +
T Consensus 1 dp~~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g 80 (101)
T d2cpea1 1 DPDEDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDG 80 (101)
T ss_dssp CCCCCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTT
T ss_pred CCCCCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCC
Confidence 366778889999999999999999999999999884 5677888889999999999999999999999985 5
Q ss_pred CCcCCceeEEEeccCCCC
Q 024711 95 PFIDGRRANCNLASLGRP 112 (264)
Q Consensus 95 ~~i~Gr~l~V~~a~~~~~ 112 (264)
..|+|++|+|++|..+.+
T Consensus 81 ~~~~gr~i~V~~a~~~~p 98 (101)
T d2cpea1 81 KDFQGSKLKVSLARKKPP 98 (101)
T ss_dssp CEETTEECEEECSSCCCC
T ss_pred CEECCEEEEEEEcCCCCC
Confidence 679999999999976543
No 37
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=3e-20 Score=140.26 Aligned_cols=85 Identities=21% Similarity=0.252 Sum_probs=76.1
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
..+...|||+|||+++||++|+++|+.+|.|..+.++.+..+++++|||||+|.+.++|++||+.++..|+||.|+|.++
T Consensus 12 ~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~~~~~~i~gR~i~V~~~ 91 (104)
T d1wg5a_ 12 TANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKS 91 (104)
T ss_dssp CSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSSCCEEEEE
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHhhCCCEEcceEEEEEEC
Confidence 34556799999999999999999999999999887878777899999999999999999999987777899999999999
Q ss_pred cCCCC
Q 024711 108 SLGRP 112 (264)
Q Consensus 108 ~~~~~ 112 (264)
..++.
T Consensus 92 ~~~~~ 96 (104)
T d1wg5a_ 92 SRAEV 96 (104)
T ss_dssp CTTTS
T ss_pred CHHHh
Confidence 76543
No 38
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3e-20 Score=137.52 Aligned_cols=82 Identities=30% Similarity=0.555 Sum_probs=74.0
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCCceeEEE
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDGRRANCN 105 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~Gr~l~V~ 105 (264)
.+...++|||+|||+++++++|+++|++||.|++|+|++|+ +.++|||||+|.+.++|++||+.+ +.+|+|++|+|+
T Consensus 7 ~~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~ 84 (93)
T d2cq3a1 7 SKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVN 84 (93)
T ss_dssp CSCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCT--TTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccc--cCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 45567899999999999999999999999999999999996 447999999999999999999884 567999999999
Q ss_pred eccCC
Q 024711 106 LASLG 110 (264)
Q Consensus 106 ~a~~~ 110 (264)
+|..+
T Consensus 85 ~A~~r 89 (93)
T d2cq3a1 85 NATAR 89 (93)
T ss_dssp ECCSS
T ss_pred ecCcC
Confidence 99654
No 39
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=5.4e-21 Score=137.81 Aligned_cols=79 Identities=9% Similarity=0.168 Sum_probs=67.2
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCCceeEEEeccC
Q 024711 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDGRRANCNLASL 109 (264)
Q Consensus 31 ~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~Gr~l~V~~a~~ 109 (264)
.++|||+|||+++|+++|+++|++||.|..++++.++.+++++|||||+|.+.++|++||+.+ +..|+|++|+|+++++
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 379999999999999999999999999999999998889999999999999999999999985 4669999999999853
No 40
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.81 E-value=1.3e-20 Score=137.55 Aligned_cols=80 Identities=21% Similarity=0.325 Sum_probs=69.0
Q ss_pred CCcEEEEcCCCCCCC-HHHHHHHhhcCCCEEEEEEeec-CCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 30 TYTKVFVGGLAWETQ-SETMRRYFEQFGEILEAVVITD-KNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 30 ~~~~lfVgnLp~~vt-e~~L~~~F~~fG~I~~v~v~~d-~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
+.++|||+|||.+++ |++|+++|++||.|++|+|..+ +.+++++|||||+|.+.++|++||+.++..|+|+.|+|++|
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~~n~~~~~gr~l~V~~a 82 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQMNRSLLGNREISVSLA 82 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGGGTTEEETTEEEEEEEC
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHhcCCCEECCEEEEEEEc
Confidence 568999999999875 6679999999999999998764 56899999999999999999999975557799999999999
Q ss_pred cC
Q 024711 108 SL 109 (264)
Q Consensus 108 ~~ 109 (264)
.+
T Consensus 83 ~~ 84 (86)
T d2ghpa3 83 DK 84 (86)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 41
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=3.1e-20 Score=139.53 Aligned_cols=90 Identities=17% Similarity=0.360 Sum_probs=77.6
Q ss_pred CCCCCCCCCCCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhC-CCCC
Q 024711 18 GFQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACAD-PTPF 96 (264)
Q Consensus 18 ~~~~~~~~~~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~-~~~~ 96 (264)
+.+...+...+.+.++|||+|||.++++++|+++|++||.|.+++++.+. +++++|||||+|.+.++|++||+. ++.+
T Consensus 5 g~~~~~~~~~~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~ 83 (101)
T d1x5oa1 5 GVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKF 83 (101)
T ss_dssp CCCCCCCSCCCCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCC
T ss_pred ccccchhccccCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCE
Confidence 33344444556677899999999999999999999999999999999885 799999999999999999999988 5577
Q ss_pred cCCceeEEEecc
Q 024711 97 IDGRRANCNLAS 108 (264)
Q Consensus 97 i~Gr~l~V~~a~ 108 (264)
|+||++.|.++.
T Consensus 84 i~gr~~~v~~~~ 95 (101)
T d1x5oa1 84 IKTPPGVSAPTE 95 (101)
T ss_dssp CCCCTTSCCCSS
T ss_pred ECCcCCccCCCC
Confidence 999999887763
No 42
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=7.7e-20 Score=133.19 Aligned_cols=78 Identities=17% Similarity=0.262 Sum_probs=72.9
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEecc
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLAS 108 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a~ 108 (264)
..++|||+|||.++|+++|+++|+.||.|++|+|.+++ ++++||||||+|.+.++|++||+.++..+.|+.|.|.++.
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVETPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHTCCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHHHCCCEECCEEEEEEEcC
Confidence 46799999999999999999999999999999998886 7999999999999999999999887788999999999863
No 43
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=7.4e-20 Score=136.85 Aligned_cols=76 Identities=28% Similarity=0.496 Sum_probs=67.2
Q ss_pred CCCCCcEEEEcCCC-CCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEE
Q 024711 27 GDTTYTKVFVGGLA-WETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANC 104 (264)
Q Consensus 27 ~~~~~~~lfVgnLp-~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V 104 (264)
.....++|||+||+ ..+++++|+++|++||.|++|+| +||||||+|++.++|++||+.++ .+|+|++|+|
T Consensus 11 ~~~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V 82 (98)
T d1wf2a_ 11 PRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDI 82 (98)
T ss_dssp CSSCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEE
T ss_pred CCCCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEE
Confidence 44556789999997 67889999999999999999998 37899999999999999999966 6799999999
Q ss_pred EeccCC
Q 024711 105 NLASLG 110 (264)
Q Consensus 105 ~~a~~~ 110 (264)
+++..+
T Consensus 83 ~~a~~~ 88 (98)
T d1wf2a_ 83 NLAAEP 88 (98)
T ss_dssp EETTSC
T ss_pred EECCCC
Confidence 999654
No 44
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=9.4e-20 Score=137.07 Aligned_cols=83 Identities=22% Similarity=0.243 Sum_probs=73.0
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEe
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNL 106 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~ 106 (264)
.....++|||+|||+++||++|+++|+.|+ |.++.++++. +++++|||||+|.+.++|++||+.++++|+||.|+|.+
T Consensus 11 ~~~~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 11 QSTTGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIGP-DGRVTGEADVEFATHEDAVAAMAKDKANMQHRYVELFL 88 (102)
T ss_dssp CCSSSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEESS-SSCEEEEEEEECSSSHHHHHHHTTSSCCSSSSCCEEEE
T ss_pred cCCCCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEec-CCcceEEEEEEECCHHHHHHHHHcCCCEECCEEEEEEE
Confidence 345667999999999999999999999997 5578888886 58999999999999999999998766889999999999
Q ss_pred ccCCC
Q 024711 107 ASLGR 111 (264)
Q Consensus 107 a~~~~ 111 (264)
+..+.
T Consensus 89 s~~~~ 93 (102)
T d1weza_ 89 NSTAG 93 (102)
T ss_dssp ECCCC
T ss_pred cCCCC
Confidence 86543
No 45
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.1e-19 Score=135.11 Aligned_cols=83 Identities=18% Similarity=0.314 Sum_probs=73.4
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhcCCC-EEEEEEeecC-CCCCccceEEEEeCCHHHHHHHHhCCC--C-CcCCceeEEE
Q 024711 31 YTKVFVGGLAWETQSETMRRYFEQFGE-ILEAVVITDK-NTGRSKGYGFVTFREPEAARRACADPT--P-FIDGRRANCN 105 (264)
Q Consensus 31 ~~~lfVgnLp~~vte~~L~~~F~~fG~-I~~v~v~~d~-~tg~skG~gFV~F~~~e~A~~Ai~~~~--~-~i~Gr~l~V~ 105 (264)
+|+|||+|||.++|+++|+++|++||. |++++|++|. .+++++|||||+|.+.++|++||+.++ . .++|+.|+|+
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 479999999999999999999999996 9999999885 468999999999999999999999864 2 3789999999
Q ss_pred eccCCCCC
Q 024711 106 LASLGRPR 113 (264)
Q Consensus 106 ~a~~~~~~ 113 (264)
||.++...
T Consensus 81 ~A~p~~~~ 88 (96)
T d2disa1 81 WAEPEIDV 88 (96)
T ss_dssp ESCSSCST
T ss_pred EcCCCCCC
Confidence 99765443
No 46
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.80 E-value=3.3e-21 Score=142.40 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=73.6
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEe
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNL 106 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~ 106 (264)
.....++|||+|||+++|+++|+++|++||.|++++|+.+ .+|++||||||+|.+.++|++||+.++.+|+|++|+|++
T Consensus 9 ~~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~~~g~~~~g~~i~V~~ 87 (91)
T d1fjeb1 9 ESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEK 87 (91)
T ss_dssp SCSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHHGGGEEETTEEEEEEC
T ss_pred CCCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHhcCCcEECCEEEEEEe
Confidence 3456679999999999999999999999999999988765 479999999999999999999998555779999999999
Q ss_pred ccC
Q 024711 107 ASL 109 (264)
Q Consensus 107 a~~ 109 (264)
|..
T Consensus 88 ak~ 90 (91)
T d1fjeb1 88 PKG 90 (91)
T ss_dssp CCC
T ss_pred cCC
Confidence 854
No 47
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=6.2e-20 Score=134.44 Aligned_cols=77 Identities=22% Similarity=0.478 Sum_probs=67.9
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEecc
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLAS 108 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a~ 108 (264)
...++|||+|||+++||++|+++|++||+|.+|++. .+++|||||+|++.++|++||. ++++|+|++|+|++|.
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~-----~~~~gfafV~f~~~~~a~~a~~-~~~~i~g~~l~v~~a~ 76 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLCG-EDLIIKGISVHISNAE 76 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECC-----SSCCSCCEEECSCHHHHHHTTT-CEEEETTEEEEEECCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEe-----eccCceEEEEECCHHHHHHHHh-CCCEECCEEeEEEeCC
Confidence 346799999999999999999999999999999874 4468999999999999999997 4467999999999996
Q ss_pred CCC
Q 024711 109 LGR 111 (264)
Q Consensus 109 ~~~ 111 (264)
++.
T Consensus 77 ~k~ 79 (88)
T d1wf0a_ 77 PKH 79 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 48
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.5e-20 Score=139.86 Aligned_cols=84 Identities=18% Similarity=0.203 Sum_probs=76.9
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEec
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLA 107 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a 107 (264)
..+++|||+|||.++++++|+++|++||.|..++++.+..+++++|||||+|.+.++|++||+.++ ..|+|++|+|++|
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 346899999999999999999999999999999999988889999999999999999999998855 6699999999999
Q ss_pred cCCCC
Q 024711 108 SLGRP 112 (264)
Q Consensus 108 ~~~~~ 112 (264)
+.++.
T Consensus 96 k~k~~ 100 (102)
T d2cpxa1 96 KNKKQ 100 (102)
T ss_dssp CCCSC
T ss_pred CCccc
Confidence 76543
No 49
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.7e-19 Score=132.73 Aligned_cols=79 Identities=20% Similarity=0.370 Sum_probs=70.3
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCCceeEEEec
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDGRRANCNLA 107 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~Gr~l~V~~a 107 (264)
...++|||+|||.++|+++|+++|++||.|+.+++..+ ..+++||||+|++.++|++||+.+ +.+|+|++|+|++|
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a 88 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFP 88 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEec
Confidence 45578999999999999999999999999999987654 567899999999999999999985 57799999999998
Q ss_pred cCC
Q 024711 108 SLG 110 (264)
Q Consensus 108 ~~~ 110 (264)
+..
T Consensus 89 ~~~ 91 (95)
T d1x4aa1 89 RSG 91 (95)
T ss_dssp CCC
T ss_pred cCC
Confidence 543
No 50
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=2.9e-19 Score=127.05 Aligned_cols=74 Identities=16% Similarity=0.240 Sum_probs=68.1
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
++|||+|||+++++++|+++|+.||.|+++++..++. ..++||||+|++.++|++||+.+++.|+|++|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~--~~~~~afV~F~~~~~a~~Al~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLK--KNFRFARIEFARYDGALAAITKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTT--SSSEEEEEEESSHHHHHHHHTTTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecc--ccceEEEEEEcchHHhHHHHHhcCcEECCEEEEEEEC
Confidence 5899999999999999999999999999999999974 3457999999999999999987778899999999875
No 51
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.4e-19 Score=136.26 Aligned_cols=78 Identities=17% Similarity=0.274 Sum_probs=70.8
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEec
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLA 107 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a 107 (264)
..+++|||+||+.++|+++|+++|++||.|++|++..+ +++||||||+|.+.++|++||+.++ ..|+|++|.|.++
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a 81 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYY 81 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 34689999999999999999999999999999999765 6779999999999999999998854 6699999999998
Q ss_pred cC
Q 024711 108 SL 109 (264)
Q Consensus 108 ~~ 109 (264)
..
T Consensus 82 ~~ 83 (114)
T d2f9da1 82 NA 83 (114)
T ss_dssp CH
T ss_pred CC
Confidence 64
No 52
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.78 E-value=2.8e-19 Score=132.93 Aligned_cols=81 Identities=19% Similarity=0.297 Sum_probs=71.2
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEE
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCN 105 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~ 105 (264)
...+.++|||+||+.++||++|+++|++||.|..++. +++++|||||+|.+.++|++||+.++ ..|+|++|+|.
T Consensus 12 ~~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~ 86 (96)
T d1fjca_ 12 KVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLY 86 (96)
T ss_dssp TTTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEE
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 3456789999999999999999999999998876643 68899999999999999999998865 66999999999
Q ss_pred eccCCCC
Q 024711 106 LASLGRP 112 (264)
Q Consensus 106 ~a~~~~~ 112 (264)
++.++..
T Consensus 87 ~a~~k~~ 93 (96)
T d1fjca_ 87 YTGEKGG 93 (96)
T ss_dssp ECSSSCC
T ss_pred EeCCCCC
Confidence 9976543
No 53
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=4.7e-19 Score=131.89 Aligned_cols=74 Identities=32% Similarity=0.560 Sum_probs=68.2
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCCceeEEEecc
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDGRRANCNLAS 108 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~Gr~l~V~~a~ 108 (264)
..++|||+||+.+++|++|+++|++||.|++|+|++| ||||||+|.+.++|++||+.+ +.+|+|+.|+|.|++
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak 90 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 90 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 4578999999999999999999999999999999876 689999999999999999884 567999999999985
Q ss_pred C
Q 024711 109 L 109 (264)
Q Consensus 109 ~ 109 (264)
+
T Consensus 91 ~ 91 (96)
T d1x4ga1 91 E 91 (96)
T ss_dssp C
T ss_pred C
Confidence 4
No 54
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=8e-19 Score=127.97 Aligned_cols=75 Identities=27% Similarity=0.488 Sum_probs=68.5
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCCceeEEEecc
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDGRRANCNLAS 108 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~Gr~l~V~~a~ 108 (264)
..++|||+|||.++++++|+++|++||+|++|++.++ ||||||+|++.++|++||+.+ +..|+|++|+|++|.
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~ 80 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFAC 80 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 4568999999999999999999999999999999866 679999999999999999985 467999999999996
Q ss_pred CC
Q 024711 109 LG 110 (264)
Q Consensus 109 ~~ 110 (264)
.+
T Consensus 81 ~~ 82 (86)
T d2cpja1 81 HS 82 (86)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 55
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=3.5e-19 Score=129.55 Aligned_cols=78 Identities=19% Similarity=0.276 Sum_probs=69.3
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEec
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLA 107 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a 107 (264)
..++|||+|||++++|++|+++|+.||.|..+.++.+..+++++|+|||+|.+.++|++||++++ ..|+||+|+|+++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 45689999999999999999999999999875555555689999999999999999999998855 6799999999985
No 56
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.4e-19 Score=136.17 Aligned_cols=83 Identities=17% Similarity=0.274 Sum_probs=72.7
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
+.....|||+|||+++|+++|+++|+.||.|..+.++.+..+|+++|||||+|.+.++|++||+.++..|+|+.|.|.++
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~~n~~~i~gr~i~V~~~ 84 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNGREAFVHVV 84 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGGGCSEEETTEEEEEEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHhcCCCeECCcEEEEEEC
Confidence 33456799999999999999999999999998866666666899999999999999999999986667799999999998
Q ss_pred cCC
Q 024711 108 SLG 110 (264)
Q Consensus 108 ~~~ 110 (264)
..+
T Consensus 85 ~~~ 87 (103)
T d2cpya1 85 TLE 87 (103)
T ss_dssp CHH
T ss_pred CHH
Confidence 644
No 57
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.5e-18 Score=131.46 Aligned_cols=75 Identities=15% Similarity=0.250 Sum_probs=67.7
Q ss_pred CcEEEEcCCCC-CCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEecc
Q 024711 31 YTKVFVGGLAW-ETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLAS 108 (264)
Q Consensus 31 ~~~lfVgnLp~-~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~ 108 (264)
+++|||+||++ .+||++|+++|++||+|++|+|++|+ ||||||+|++.++|++||+.++ ..|+|+.|+|+++.
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 47999999965 69999999999999999999998874 7899999999999999999855 67999999999986
Q ss_pred CC
Q 024711 109 LG 110 (264)
Q Consensus 109 ~~ 110 (264)
..
T Consensus 77 ~~ 78 (109)
T d2adca1 77 HQ 78 (109)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 58
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.76 E-value=2e-18 Score=124.82 Aligned_cols=77 Identities=18% Similarity=0.212 Sum_probs=68.0
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCc-CCceeEE
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFI-DGRRANC 104 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i-~Gr~l~V 104 (264)
+...+++|||+||+.++|+++|+++|++||.|++|++++++ +|||||+|.+.++|++|++.++ ..| +|+.|+|
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~-----~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v 78 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFTTELQSNAAKEALQGFKITPTHAMKI 78 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTT-----CSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeeccc-----ceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEE
Confidence 34457899999999999999999999999999999997653 6899999999999999999854 555 6799999
Q ss_pred Eecc
Q 024711 105 NLAS 108 (264)
Q Consensus 105 ~~a~ 108 (264)
+||+
T Consensus 79 ~~ak 82 (83)
T d2b0ga1 79 TFAK 82 (83)
T ss_dssp EECC
T ss_pred EEec
Confidence 9985
No 59
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=7.9e-19 Score=127.72 Aligned_cols=79 Identities=22% Similarity=0.265 Sum_probs=69.0
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEE
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCN 105 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~ 105 (264)
.....++|||+|||.++++++|+++|++||.|..+++. +++|||||+|.+.++|++||+.++ ..|+|+.|+|+
T Consensus 4 ~~~~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~------~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~ 77 (86)
T d2cpda1 4 TMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVT 77 (86)
T ss_dssp CSSCCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEE------ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEE
T ss_pred cccCCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEc------cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 34566899999999999999999999999999888773 457899999999999999999855 56999999999
Q ss_pred eccCCC
Q 024711 106 LASLGR 111 (264)
Q Consensus 106 ~a~~~~ 111 (264)
+|.+++
T Consensus 78 ~akP~~ 83 (86)
T d2cpda1 78 LAKPVD 83 (86)
T ss_dssp CCCCCC
T ss_pred eccCCC
Confidence 996443
No 60
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.8e-19 Score=126.79 Aligned_cols=70 Identities=30% Similarity=0.566 Sum_probs=65.8
Q ss_pred EEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeE
Q 024711 34 VFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRAN 103 (264)
Q Consensus 34 lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~ 103 (264)
|||+|||.++||++|+++|++||.|.++++++++.+++++|||||+|.+.++|++||+.++ ..|+|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 7999999999999999999999999999999999999999999999999999999999855 668888764
No 61
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=3.1e-19 Score=128.43 Aligned_cols=75 Identities=20% Similarity=0.372 Sum_probs=66.6
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CC-cCCceeEEEeccC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PF-IDGRRANCNLASL 109 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~-i~Gr~l~V~~a~~ 109 (264)
++|||+|||.++||++|+++|++||.|.+++++++ ||||||+|.+.++|++||+.++ .. |+|++|+|++|.+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 47999999999999999999999999988777654 7899999999999999999855 44 9999999999976
Q ss_pred CCC
Q 024711 110 GRP 112 (264)
Q Consensus 110 ~~~ 112 (264)
++.
T Consensus 76 k~~ 78 (80)
T d2cqha1 76 KKL 78 (80)
T ss_dssp CCC
T ss_pred cCc
Confidence 543
No 62
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.5e-18 Score=129.60 Aligned_cols=78 Identities=15% Similarity=0.179 Sum_probs=68.9
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEE
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCN 105 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~ 105 (264)
...+.++|||+|||+++++++|+++|++||+|++|+|.+ +|||||+|.+.++|++||+++| .+|+|+.|+|.
T Consensus 11 ~~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~ 83 (98)
T d1wg4a_ 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETS 83 (98)
T ss_dssp CCSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEE
Confidence 345677899999999999999999999999999999853 4799999999999999999855 66999999999
Q ss_pred eccCCC
Q 024711 106 LASLGR 111 (264)
Q Consensus 106 ~a~~~~ 111 (264)
+++.+.
T Consensus 84 ~~~~~~ 89 (98)
T d1wg4a_ 84 YIRVYP 89 (98)
T ss_dssp EEEEEC
T ss_pred EEecCC
Confidence 986543
No 63
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=4.7e-19 Score=130.04 Aligned_cols=77 Identities=27% Similarity=0.404 Sum_probs=68.6
Q ss_pred CCCcEEEEcCCCCCCCHHHH---HHHhhcCCCEEEEEEeecCCCCCcc---ceEEEEeCCHHHHHHHHhCCC-CCcCCce
Q 024711 29 TTYTKVFVGGLAWETQSETM---RRYFEQFGEILEAVVITDKNTGRSK---GYGFVTFREPEAARRACADPT-PFIDGRR 101 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L---~~~F~~fG~I~~v~v~~d~~tg~sk---G~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~ 101 (264)
.+.++|||+|||+++++++| +++|++||+|++|+|++|+.++.++ |||||+|++.++|++||+.+| ..|+|+.
T Consensus 6 iq~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~ 85 (89)
T d2cpia1 6 VQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRT 85 (89)
T ss_dssp CCSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEE
T ss_pred EecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEE
Confidence 34568999999999999999 6789999999999999998776654 899999999999999999855 6699999
Q ss_pred eEEE
Q 024711 102 ANCN 105 (264)
Q Consensus 102 l~V~ 105 (264)
|+|+
T Consensus 86 lkvS 89 (89)
T d2cpia1 86 LKAS 89 (89)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9985
No 64
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=1.2e-17 Score=125.80 Aligned_cols=79 Identities=22% Similarity=0.280 Sum_probs=69.4
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC--C-CCcCCceeEE
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP--T-PFIDGRRANC 104 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~--~-~~i~Gr~l~V 104 (264)
....++|||+|||.++||++|+++|++||.|+++++.++ |++|||+|++.++|++||+.+ + ..++|++|+|
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v 85 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEE
Confidence 345789999999999999999999999999999999755 679999999999999999863 3 4589999999
Q ss_pred EeccCCCC
Q 024711 105 NLASLGRP 112 (264)
Q Consensus 105 ~~a~~~~~ 112 (264)
.+++.++.
T Consensus 86 ~~s~~~~~ 93 (104)
T d1wexa_ 86 NYSTSKRI 93 (104)
T ss_dssp EECSSSSC
T ss_pred EEcCCCcc
Confidence 99976543
No 65
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=7e-18 Score=125.49 Aligned_cols=75 Identities=27% Similarity=0.497 Sum_probs=66.3
Q ss_pred CCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCC--ceeEEE
Q 024711 29 TTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDG--RRANCN 105 (264)
Q Consensus 29 ~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~G--r~l~V~ 105 (264)
...++|||+||+.++++++|+++|++||+|++|++.++ ++||||+|.+.++|++|++.++ ..|+| ++|+|+
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~ 88 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVD 88 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEE
Confidence 34689999999999999999999999999999999765 6799999999999999999854 55765 589999
Q ss_pred eccC
Q 024711 106 LASL 109 (264)
Q Consensus 106 ~a~~ 109 (264)
+|+.
T Consensus 89 ~ak~ 92 (97)
T d1whya_ 89 FAKS 92 (97)
T ss_dssp ECCC
T ss_pred eCCC
Confidence 9964
No 66
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=2.6e-18 Score=130.35 Aligned_cols=76 Identities=20% Similarity=0.233 Sum_probs=67.9
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEecc
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLAS 108 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~ 108 (264)
..++|||+|||.++++++|+++|++||+|++|.|. ++||||||+|.+.++|++||+.++ ..|.|++|+|+++.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~------~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP------EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC------SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee------ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 35799999999999999999999999999999883 357899999999999999999854 67999999999996
Q ss_pred CCC
Q 024711 109 LGR 111 (264)
Q Consensus 109 ~~~ 111 (264)
...
T Consensus 83 ~~~ 85 (111)
T d1whxa_ 83 IGV 85 (111)
T ss_dssp TTT
T ss_pred CCc
Confidence 543
No 67
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=2.4e-18 Score=131.41 Aligned_cols=83 Identities=18% Similarity=0.369 Sum_probs=73.6
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
....+.|||+|||+++|+++|+++|+.||.|..+.++.+..+|+++|||||+|.+.++|++|++.++..|+||.|+|..+
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~~~~~~i~gR~i~V~~~ 94 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMGNRFIQVHPI 94 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHTSCSBCSTTSCBEEEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHHcCCCcCCCEEEEEEEc
Confidence 33556899999999999999999999999998877777767899999999999999999999986667799999999988
Q ss_pred cCC
Q 024711 108 SLG 110 (264)
Q Consensus 108 ~~~ 110 (264)
...
T Consensus 95 ~~~ 97 (112)
T d1wela1 95 TKK 97 (112)
T ss_dssp CHH
T ss_pred ChH
Confidence 543
No 68
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.3e-18 Score=122.56 Aligned_cols=72 Identities=22% Similarity=0.367 Sum_probs=64.9
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEecc
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLAS 108 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~ 108 (264)
..++|||+||+ +||++|+++|++||+|++|++.++ +|||||+|++.++|++||++++ ..|+|++|+|++|+
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 75 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIAR 75 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECC
T ss_pred CCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEec
Confidence 46799999985 899999999999999999999655 6799999999999999999854 67999999999995
Q ss_pred C
Q 024711 109 L 109 (264)
Q Consensus 109 ~ 109 (264)
+
T Consensus 76 ~ 76 (79)
T d2bz2a1 76 K 76 (79)
T ss_dssp S
T ss_pred C
Confidence 4
No 69
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.2e-18 Score=127.26 Aligned_cols=72 Identities=19% Similarity=0.248 Sum_probs=64.9
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC-CCCcCCceeEEEeccCC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP-TPFIDGRRANCNLASLG 110 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~-~~~i~Gr~l~V~~a~~~ 110 (264)
++|||+|||+++++++|+++|++||.|++++|++| |||||+|.+.++|++||+.+ +.+|+|+.|+|.++..+
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 47999999999999999999999999999998654 79999999999999999874 57799999999887544
No 70
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=8.5e-18 Score=137.58 Aligned_cols=84 Identities=29% Similarity=0.581 Sum_probs=78.0
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEe
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNL 106 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~ 106 (264)
.....++|||+||++++|+++|+++|+.||.|+.+.|++|+.+++++|||||+|.+.++|++||+.+++.|+|++|+|++
T Consensus 93 ~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~~~~~~~~G~~i~V~~ 172 (183)
T d1u1qa_ 93 AHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 172 (183)
T ss_dssp TTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHTSSCEEETTEEEEEEE
T ss_pred cccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHHhCCCeECCEEEEEEe
Confidence 34567899999999999999999999999999999999999999999999999999999999998777779999999999
Q ss_pred ccCC
Q 024711 107 ASLG 110 (264)
Q Consensus 107 a~~~ 110 (264)
|.++
T Consensus 173 A~~k 176 (183)
T d1u1qa_ 173 ALSK 176 (183)
T ss_dssp CCCH
T ss_pred cCCc
Confidence 8654
No 71
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=5.4e-18 Score=128.48 Aligned_cols=80 Identities=15% Similarity=0.312 Sum_probs=69.7
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCc--CCceeEE
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFI--DGRRANC 104 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i--~Gr~l~V 104 (264)
.....+|||+||++++||++|+++|++||.|++|+|++++ ++|+|||+|++.++|++||+.++ ..| .+++|+|
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v 79 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRI 79 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEE
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEE
Confidence 3456799999999999999999999999999999998874 48999999999999999999854 445 6889999
Q ss_pred EeccCCC
Q 024711 105 NLASLGR 111 (264)
Q Consensus 105 ~~a~~~~ 111 (264)
.++..+.
T Consensus 80 ~~s~~~~ 86 (108)
T d2adba1 80 DFSKLTS 86 (108)
T ss_dssp EECSSCS
T ss_pred EecCCcc
Confidence 9986543
No 72
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=3.2e-18 Score=125.21 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=62.8
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEeccC
Q 024711 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLASL 109 (264)
Q Consensus 31 ~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~~ 109 (264)
.++|||+|||++++++||+++|++|| ++.+.+ +++||||||+|.+.++|++||+.++ ..|+|++|+|+++..
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~ 77 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPT 77 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 46899999999999999999999999 333333 4568999999999999999999855 669999999999954
Q ss_pred C
Q 024711 110 G 110 (264)
Q Consensus 110 ~ 110 (264)
+
T Consensus 78 ~ 78 (88)
T d1wg1a_ 78 D 78 (88)
T ss_dssp C
T ss_pred C
Confidence 3
No 73
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=3.9e-18 Score=125.39 Aligned_cols=78 Identities=19% Similarity=0.353 Sum_probs=68.7
Q ss_pred CCcEEEEcCCCCCCCHHHHHH----HhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEE
Q 024711 30 TYTKVFVGGLAWETQSETMRR----YFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANC 104 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~----~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V 104 (264)
.+++|||+||++++++++|++ +|++||+|++|++.+ +++++|||||+|++.++|++|++.++ ..|+|+.|+|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 358999999999999999864 589999999998754 47889999999999999999999854 6699999999
Q ss_pred EeccCC
Q 024711 105 NLASLG 110 (264)
Q Consensus 105 ~~a~~~ 110 (264)
.+|+.+
T Consensus 79 ~~ak~~ 84 (91)
T d1nu4a_ 79 QYAKTD 84 (91)
T ss_dssp EECSSC
T ss_pred EEeCCC
Confidence 999754
No 74
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.3e-17 Score=121.74 Aligned_cols=76 Identities=9% Similarity=0.192 Sum_probs=66.7
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCc-CCceeEEEec
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFI-DGRRANCNLA 107 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i-~Gr~l~V~~a 107 (264)
.+++|||+|||.+++|++|+++|++||.|.++++..+ +++|||||+|++.++|.+|+.+++ ..| +|+.|+|+++
T Consensus 9 Ps~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~----~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~s 84 (88)
T d2adca2 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ----KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFS 84 (88)
T ss_dssp SCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS----SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEEC
T ss_pred CCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee----cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeC
Confidence 4679999999999999999999999999998877654 457899999999999999998855 556 6999999998
Q ss_pred cC
Q 024711 108 SL 109 (264)
Q Consensus 108 ~~ 109 (264)
+.
T Consensus 85 k~ 86 (88)
T d2adca2 85 KS 86 (88)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 75
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2.2e-17 Score=120.45 Aligned_cols=79 Identities=13% Similarity=0.153 Sum_probs=69.6
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC--C-CCcCCceeE
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP--T-PFIDGRRAN 103 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~--~-~~i~Gr~l~ 103 (264)
+...+++|||+||+.++++++|+++|++||.|.+++++++ +++|||+|.+.++|++|++.+ + ..++|++|+
T Consensus 4 ~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~ 77 (88)
T d2cq1a1 4 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIY 77 (88)
T ss_dssp CSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEE
Confidence 4557789999999999999999999999999999999765 579999999999999999863 3 569999999
Q ss_pred EEeccCCC
Q 024711 104 CNLASLGR 111 (264)
Q Consensus 104 V~~a~~~~ 111 (264)
|+++..++
T Consensus 78 v~~sk~~~ 85 (88)
T d2cq1a1 78 IQYSNHKE 85 (88)
T ss_dssp EEECSCSS
T ss_pred EEECCCCC
Confidence 99996543
No 76
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=1.8e-17 Score=117.61 Aligned_cols=70 Identities=19% Similarity=0.296 Sum_probs=61.7
Q ss_pred EEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEeccCC
Q 024711 34 VFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLASLG 110 (264)
Q Consensus 34 lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~~~ 110 (264)
|||+|||.++++++|+++|++|| +..+++ ++++|||||+|.+.++|++||+.+| ..++|++|+|+++..+
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 555554 4568999999999999999999855 6699999999999543
No 77
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=3.2e-17 Score=122.43 Aligned_cols=77 Identities=14% Similarity=0.236 Sum_probs=67.4
Q ss_pred CCCCcEEEEcCCCCC-CCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhC---CCCCcCCceeE
Q 024711 28 DTTYTKVFVGGLAWE-TQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACAD---PTPFIDGRRAN 103 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~-vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~---~~~~i~Gr~l~ 103 (264)
....++|||+|||.+ +|+++|+++|++||.|++++++++ ||+|||+|.+.++|++||+. ++..|+|++|+
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~ 88 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVK 88 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCE
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEE
Confidence 345689999999985 899999999999999999999766 57999999999999999973 34569999999
Q ss_pred EEeccCC
Q 024711 104 CNLASLG 110 (264)
Q Consensus 104 V~~a~~~ 110 (264)
|++|+.+
T Consensus 89 V~~s~~~ 95 (99)
T d1x4fa1 89 VDLSEKY 95 (99)
T ss_dssp EEEECSC
T ss_pred EEEcCCc
Confidence 9999644
No 78
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=7.5e-19 Score=128.92 Aligned_cols=77 Identities=16% Similarity=0.284 Sum_probs=66.9
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEe-----ecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEE
Q 024711 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVI-----TDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCN 105 (264)
Q Consensus 31 ~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~-----~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~ 105 (264)
.++|||+|||.++||++|+++|++||.|.++.+. .+..++++||||||+|.+.|+|++|++.++..++|++|+|+
T Consensus 1 aRrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 1 ARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIR 80 (90)
T ss_dssp CCEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGGGSSCCSSSSCCCCB
T ss_pred CCEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHhhCCcEECCEEEEEC
Confidence 3789999999999999999999999988776553 45567889999999999999999999755677999999997
Q ss_pred ec
Q 024711 106 LA 107 (264)
Q Consensus 106 ~a 107 (264)
.+
T Consensus 81 r~ 82 (90)
T d1u2fa_ 81 RP 82 (90)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 79
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=9.9e-17 Score=120.88 Aligned_cols=78 Identities=9% Similarity=-0.001 Sum_probs=66.6
Q ss_pred CCCcEEEEcCCCCCC-CH----HHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCcee
Q 024711 29 TTYTKVFVGGLAWET-QS----ETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRA 102 (264)
Q Consensus 29 ~~~~~lfVgnLp~~v-te----~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l 102 (264)
...++|||+||+.++ ++ ++|+++|+.||.|++++++++ +++|||+|++.++|++||+.++ ..|+|++|
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l 76 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS------FKRVRINFSNPLSAADARLRLHKTEFLGKEM 76 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETT------TTEEEEECSSTTHHHHHHHTSTTSEETTEEC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecC------CCEEEEEECCHHHHHHHHHHhcccccCCCEe
Confidence 346789999999886 33 569999999999999999754 6799999999999999999977 55999999
Q ss_pred EEEeccCCCC
Q 024711 103 NCNLASLGRP 112 (264)
Q Consensus 103 ~V~~a~~~~~ 112 (264)
+|.+|+....
T Consensus 77 ~v~~a~~~~~ 86 (104)
T d1weya_ 77 KLYFAQTLHI 86 (104)
T ss_dssp EEECCCCSSC
T ss_pred EEeecccCCC
Confidence 9999965443
No 80
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.64 E-value=2e-16 Score=115.83 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=67.1
Q ss_pred CCCCcEEEEcCCCCC-CCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC--C-CCcCCceeE
Q 024711 28 DTTYTKVFVGGLAWE-TQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP--T-PFIDGRRAN 103 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~-vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~--~-~~i~Gr~l~ 103 (264)
.+.+++|||+||+.. +|++||+++|++||+|.+|+++.+ +++|||+|++.++|++|++.+ + ..++|++|+
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~ 78 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVR 78 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECE
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEE
Confidence 456789999999986 899999999999999999999776 459999999999999999853 3 459999999
Q ss_pred EEeccC
Q 024711 104 CNLASL 109 (264)
Q Consensus 104 V~~a~~ 109 (264)
|++|.+
T Consensus 79 V~~s~~ 84 (89)
T d1x4da1 79 VHLSQK 84 (89)
T ss_dssp EEEECC
T ss_pred EEECCC
Confidence 999964
No 81
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=6.6e-16 Score=126.09 Aligned_cols=81 Identities=38% Similarity=0.634 Sum_probs=75.4
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEeccC
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLASL 109 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a~~ 109 (264)
..++|||+|||+++||++|+++|++||.|++++++++..+++++|||||+|.+.++|++|++.++..++.+.+.+.....
T Consensus 5 ~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~~~~~~ 84 (183)
T d1u1qa_ 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVS 84 (183)
T ss_dssp HHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEECEEEECCC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCcccccchhhhhhhh
Confidence 45899999999999999999999999999999999999999999999999999999999999988889999988887654
Q ss_pred C
Q 024711 110 G 110 (264)
Q Consensus 110 ~ 110 (264)
.
T Consensus 85 ~ 85 (183)
T d1u1qa_ 85 R 85 (183)
T ss_dssp T
T ss_pred c
Confidence 3
No 82
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=5.9e-17 Score=122.13 Aligned_cols=75 Identities=24% Similarity=0.301 Sum_probs=69.1
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEec
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLA 107 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a 107 (264)
++++|.++..+++|++|+++|++||+|++|+|+++. ++++||+|||+|++.++|++||+.++ +.++||+|+|++.
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~-~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNL-GDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSS-SSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCC-CCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 568888999999999999999999999999998875 79999999999999999999999854 7799999999985
No 83
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=8.9e-15 Score=111.45 Aligned_cols=75 Identities=20% Similarity=0.215 Sum_probs=61.8
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCH-HHHHHHHhCCC-CCcCCceeEEE
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREP-EAARRACADPT-PFIDGRRANCN 105 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~-e~A~~Ai~~~~-~~i~Gr~l~V~ 105 (264)
..-...+|||||++++|+++|+++|++||+|.+|+|+++ +|||||+|.+. ++|.+|+..++ ..|.++.+.|.
T Consensus 8 ~~g~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~ 81 (113)
T d1owxa_ 8 KIGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVT 81 (113)
T ss_dssp CCCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEE
T ss_pred CCCCeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEE
Confidence 334557799999999999999999999999999999865 68999999985 78888888855 45666666666
Q ss_pred ecc
Q 024711 106 LAS 108 (264)
Q Consensus 106 ~a~ 108 (264)
++.
T Consensus 82 ~~~ 84 (113)
T d1owxa_ 82 WEV 84 (113)
T ss_dssp EEE
T ss_pred Eee
Confidence 654
No 84
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=2.1e-14 Score=103.12 Aligned_cols=73 Identities=19% Similarity=0.201 Sum_probs=61.3
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCce-eEEEecc
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRR-ANCNLAS 108 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~-l~V~~a~ 108 (264)
+.+.|+|++||++++++.|+ +|++||+|+++++. +.++|+||+|.++++|++||+.++..|+|+. |.|+...
T Consensus 3 ~~~wV~V~G~p~~~~~~il~-~F~~~G~I~~~~~~------~~~~~~fV~f~~~~~A~~Al~~nG~~~~g~~~vgV~~~~ 75 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYILL-QFAQYGNILKHVMS------NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCI 75 (81)
T ss_dssp GGGEEEEECCCGGGHHHHHH-HHHTTSCEEEEEEC------SSSSEEEEEESSHHHHHHHHTTTTCEETTTEECEEEECC
T ss_pred cccEEEEECCChHHHHHHHH-HHHhhhhhheEEec------CCCCEEEEEEcccHHHHHHHhcCCCeECCcEEEEEEeCC
Confidence 46789999999999876664 79999999999874 4478999999999999999986667799984 5787764
Q ss_pred C
Q 024711 109 L 109 (264)
Q Consensus 109 ~ 109 (264)
.
T Consensus 76 ~ 76 (81)
T d1wwha1 76 D 76 (81)
T ss_dssp C
T ss_pred C
Confidence 3
No 85
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.7e-14 Score=107.76 Aligned_cols=68 Identities=19% Similarity=0.290 Sum_probs=57.0
Q ss_pred CCCcEEEEc--CCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CC-cCCcee
Q 024711 29 TTYTKVFVG--GLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PF-IDGRRA 102 (264)
Q Consensus 29 ~~~~~lfVg--nLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~-i~Gr~l 102 (264)
...++|||. ||+.++||++|+++|++||.|++|+++.+ |+||||+|.+.++|++|++.++ +. +++..+
T Consensus 16 ~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i~~~~~~ 87 (101)
T d2cq2a1 16 YATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEVVDDLGQ 87 (101)
T ss_dssp SCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEEECTTSC
T ss_pred CCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCCCCCCCc
Confidence 345788885 59999999999999999999999988765 5799999999999999999866 44 455433
No 86
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=4.1e-13 Score=99.74 Aligned_cols=80 Identities=19% Similarity=0.296 Sum_probs=66.4
Q ss_pred CCCCCcEEEEcCC--CCCCC---------HHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-
Q 024711 27 GDTTYTKVFVGGL--AWETQ---------SETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT- 94 (264)
Q Consensus 27 ~~~~~~~lfVgnL--p~~vt---------e~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~- 94 (264)
.....+.|+|.|| +.++. +++|++.|++||.|++|++..++ .+|++||+|++.++|++|+..++
T Consensus 4 ~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~----~~G~~fV~f~~~e~A~~A~~~lng 79 (99)
T d2dita1 4 RMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRH----PDGVASVSFRDPEEADYCIQTLDG 79 (99)
T ss_dssp CCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTC----TTCEEEEECSCHHHHHHHHHHSTT
T ss_pred CCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCC----CccEEEEEECCHHHHHHHHHHhCC
Confidence 3456789999999 54332 36899999999999999887653 47999999999999999999866
Q ss_pred CCcCCceeEEEeccCC
Q 024711 95 PFIDGRRANCNLASLG 110 (264)
Q Consensus 95 ~~i~Gr~l~V~~a~~~ 110 (264)
..++||+|+|.++..+
T Consensus 80 ~~~~gr~i~v~~~~g~ 95 (99)
T d2dita1 80 RWFGGRQITAQAWDGT 95 (99)
T ss_dssp CEETTEECEEEECCSC
T ss_pred cEECCEEEEEEEeCCc
Confidence 6699999999998543
No 87
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=3.7e-12 Score=95.18 Aligned_cols=79 Identities=14% Similarity=0.081 Sum_probs=65.6
Q ss_pred CCcEEEEcCC--CCCCC--------HHHHHHHhhcCCCEEEEEEeecCCCC--CccceEEEEeCCHHHHHHHHhCCC-CC
Q 024711 30 TYTKVFVGGL--AWETQ--------SETMRRYFEQFGEILEAVVITDKNTG--RSKGYGFVTFREPEAARRACADPT-PF 96 (264)
Q Consensus 30 ~~~~lfVgnL--p~~vt--------e~~L~~~F~~fG~I~~v~v~~d~~tg--~skG~gFV~F~~~e~A~~Ai~~~~-~~ 96 (264)
.++.|.|.|| +.++. .++|++.|++||.|++|+|.++..+. ..+|++||+|.+.++|.+|++.++ ..
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 4678999998 44432 35789999999999999998876543 356899999999999999999855 67
Q ss_pred cCCceeEEEecc
Q 024711 97 IDGRRANCNLAS 108 (264)
Q Consensus 97 i~Gr~l~V~~a~ 108 (264)
++||.|.|.+..
T Consensus 83 f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 83 FANRVVVTKYCD 94 (104)
T ss_dssp SSSSCCEEEEEC
T ss_pred ECCeEEEEEEcC
Confidence 999999999975
No 88
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.55 E-value=3.2e-05 Score=54.79 Aligned_cols=53 Identities=15% Similarity=0.175 Sum_probs=47.9
Q ss_pred HHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 47 TMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 47 ~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
+|.+.|..||+|.=++++.| --.|+|.+-++|.+|+..+..++.|+.|+|...
T Consensus 40 ~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~l~g~~v~G~~l~It~~ 92 (95)
T d1ufwa_ 40 ELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVLDVDGMKVKGRAVKISGP 92 (95)
T ss_dssp HHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHHHGGGSEETTEEEEEECC
T ss_pred HHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHhccCCeEEcceEEEEecC
Confidence 57778899999999999888 469999999999999999999999999999865
No 89
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.74 E-value=0.0017 Score=43.52 Aligned_cols=59 Identities=14% Similarity=0.150 Sum_probs=48.1
Q ss_pred HHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC-CCcCCceeEEEecc
Q 024711 47 TMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT-PFIDGRRANCNLAS 108 (264)
Q Consensus 47 ~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~-~~i~Gr~l~V~~a~ 108 (264)
.|.+.|.+++.|.++.|....+ ..-.|-|...+..+|.-||..++ ..|++|+|.|++++
T Consensus 12 ~L~~~f~~h~~V~sv~l~~~~d---g~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 12 LLQEAFARHGKVKSVELSPHTD---YQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHSCEEEEEECSCCS---TTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHhheeEEEEEEEeccC---CcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 3556788999999999865532 23468899999999999999966 56999999999985
No 90
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.62 E-value=0.0036 Score=44.19 Aligned_cols=76 Identities=13% Similarity=0.116 Sum_probs=58.1
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCC--ccceEEEEeCCHHHHHHHHhC-CCCC-cCCc----eeE
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGR--SKGYGFVTFREPEAARRACAD-PTPF-IDGR----RAN 103 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~--skG~gFV~F~~~e~A~~Ai~~-~~~~-i~Gr----~l~ 103 (264)
+||.|.+||.+.||+++.+.+...+++........+.+-+ .-.-|+|.|.+.|+.....+. .++. ++.+ +..
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 6899999999999999999999999988877766654433 236789999999999988887 4444 4332 235
Q ss_pred EEec
Q 024711 104 CNLA 107 (264)
Q Consensus 104 V~~a 107 (264)
|++|
T Consensus 82 VE~A 85 (91)
T d1uw4a_ 82 VEFA 85 (91)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5555
No 91
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.98 E-value=0.014 Score=41.44 Aligned_cols=60 Identities=22% Similarity=0.313 Sum_probs=48.3
Q ss_pred CCCCCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhC
Q 024711 25 PFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACAD 92 (264)
Q Consensus 25 ~~~~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~ 92 (264)
++.......||.-..|.++...||.++|+.||.|.-..| .|. -|||...+.|+|+.++..
T Consensus 9 ~d~~p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-ddT-------Sa~V~L~~~e~~~~v~~~ 68 (100)
T d1whva_ 9 PDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-DDT-------SAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp SCCCCCCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-ETT-------EEEEECSCHHHHHHHHHH
T ss_pred CCCCCCcceeEEEeCCcccchhHHHHHhcCCCceEEEEe-cCc-------eEEEEecCHHHHHHHHHH
Confidence 344455567888899999999999999999999875544 342 799999999998888754
No 92
>d2ix0a2 b.40.4.5 (A:4-82) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=58.10 E-value=1.9 Score=28.61 Aligned_cols=38 Identities=16% Similarity=0.273 Sum_probs=23.6
Q ss_pred CCccceEEEEeCCHHHHHHHHhCCCCCcCCceeEEEec
Q 024711 70 GRSKGYGFVTFREPEAARRACADPTPFIDGRRANCNLA 107 (264)
Q Consensus 70 g~skG~gFV~F~~~e~A~~Ai~~~~~~i~Gr~l~V~~a 107 (264)
...+|||||.-++.++.--.-..++.-++|-++.|.+.
T Consensus 25 ~~~~G~GFv~~d~~~DifI~~~~~~~A~~GD~V~v~i~ 62 (79)
T d2ix0a2 25 ATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIIAVIH 62 (79)
T ss_dssp CCC--CEEEEEETTEEEEECHHHHTTCCTTCEEEEEEE
T ss_pred EeCCCcEEEEECCCCcEEECHHHHcCCCCCCEEEEEEE
Confidence 44589999998764432222233566789999998875
No 93
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=50.31 E-value=22 Score=23.68 Aligned_cols=55 Identities=18% Similarity=0.163 Sum_probs=37.0
Q ss_pred CCCCCCCHHHHHHHhh-------cCCCEEEEEEeecCCC-CCccce--EE-EEeCCHHHHHHHHhC
Q 024711 38 GLAWETQSETMRRYFE-------QFGEILEAVVITDKNT-GRSKGY--GF-VTFREPEAARRACAD 92 (264)
Q Consensus 38 nLp~~vte~~L~~~F~-------~fG~I~~v~v~~d~~t-g~skG~--gF-V~F~~~e~A~~Ai~~ 92 (264)
.|..++++++++++++ ....|+++.+-.+... ++.+|| +| ++|+|.++.+.-...
T Consensus 9 k~k~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~y~~~l~~~F~s~e~l~~Y~~h 74 (103)
T d1q4ra_ 9 SFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAH 74 (103)
T ss_dssp EECTTCCHHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHHHHHS
T ss_pred EECCCCCHHHHHHHHHHHHHhhhhCceeEEEEeccccCCcccCCCccEEEEEEECCHHHHHHHhCC
Confidence 4677888887666554 4567888887766422 556676 65 689998887765543
No 94
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=47.58 E-value=18 Score=25.11 Aligned_cols=40 Identities=13% Similarity=0.251 Sum_probs=28.3
Q ss_pred HHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCC
Q 024711 47 TMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTP 95 (264)
Q Consensus 47 ~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~ 95 (264)
++++.++.+|.+ + |.. |-...|..|++.++|++|++.+..
T Consensus 61 ~~~~~L~~~g~~---~-MSG-----SGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 61 AVLSWLLEYAPS---R-LTG-----TGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHTTTSCE---E-ECT-----TSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHhhcccc---e-ecC-----CCCEEEEEeCCHHHHHHHHHHcCc
Confidence 455566777753 2 333 234789999999999999988653
No 95
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.41 E-value=26 Score=22.12 Aligned_cols=61 Identities=11% Similarity=0.169 Sum_probs=47.9
Q ss_pred CCCCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeC----CHHHHHHHHhCCC
Q 024711 28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR----EPEAARRACADPT 94 (264)
Q Consensus 28 ~~~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~----~~e~A~~Ai~~~~ 94 (264)
+...-+|.|.++.-..-...|++.|++.-.|.++++-.. .+-+-|+|. +.++..++|++.+
T Consensus 6 ~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~------~~~v~v~~d~~~~~~~~i~~~i~~~G 70 (79)
T d1kvja_ 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLE------EKNATIIYDPKLQTPKTLQEAIDDMG 70 (79)
T ss_dssp TCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETT------TTEEEEEECTTTCCHHHHHHHHHHHT
T ss_pred CceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECC------CCEEEEEECCCCCCHHHHHHHHHhcC
Confidence 344568999999999999999999999999999988555 336778884 6677778877643
No 96
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.37 E-value=34 Score=21.11 Aligned_cols=57 Identities=11% Similarity=0.127 Sum_probs=44.7
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeC---CHHHHHHHHhCCC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR---EPEAARRACADPT 94 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~---~~e~A~~Ai~~~~ 94 (264)
-.|-|.++.-..-...|++.+++.-.|.++++-.. .+-+.|+|. +.++..++|+..+
T Consensus 4 v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~------~~~~~v~~~~~~~~~~i~~~i~~~G 63 (72)
T d2ggpb1 4 VILAVHGMTCSACTNTINTQLRALKGVTKCDISLV------TNECQVTYDNEVTADSIKEIIEDCG 63 (72)
T ss_dssp EEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTT------TCEEEEEECSSCCHHHHHHHHHHTT
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEECC------CCEEEEEECCCCCHHHHHHHHHHhC
Confidence 35778889888888999999999999999988554 346788886 5567777777655
No 97
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=37.64 E-value=40 Score=20.52 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=45.1
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeC----CHHHHHHHHhCCC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR----EPEAARRACADPT 94 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~----~~e~A~~Ai~~~~ 94 (264)
.+|.|.++.-.--...|++.+++.-.|.++.+-.. .+-+-|+|+ +.++..++|+..+
T Consensus 4 ~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~------~~~v~v~~d~~~~~~~~i~~~i~~~G 64 (69)
T d2qifa1 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLE------AGKVDVSFDADKVSVKDIADAIEDQG 64 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETT------TTEEEEEECTTTCCHHHHHHHHHHTT
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCceEEEEECC------CCEEEEEECCCCCCHHHHHHHHHHhC
Confidence 46889999988888999999999999999988555 347788884 5667777777654
No 98
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=33.98 E-value=59 Score=22.10 Aligned_cols=46 Identities=7% Similarity=-0.043 Sum_probs=32.9
Q ss_pred HHHHHHhhcCCCEEEEE-EeecCCCCCccceEEEEeCCHHHHHHHHhC
Q 024711 46 ETMRRYFEQFGEILEAV-VITDKNTGRSKGYGFVTFREPEAARRACAD 92 (264)
Q Consensus 46 ~~L~~~F~~fG~I~~v~-v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~ 92 (264)
+++.+.|.+-|-+..+. .+.++ .|+.+-...-+|+|.++.++|.+.
T Consensus 32 ~~~~~~Lk~~Gl~r~~~~~iwNk-~~~fr~~~i~EYkd~~Afk~Cq~i 78 (109)
T d2od6a1 32 PVWVKEMKSRGLLKFSMNRVWNK-GEVFRVVMTYEYKDRASFEANIAY 78 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEECSS-SSCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEEEeCC-CCcEEEEEEEEECCHHHHHHHHHH
Confidence 44556667788877654 34454 477787888899999988887754
No 99
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=33.13 E-value=48 Score=20.24 Aligned_cols=59 Identities=10% Similarity=0.079 Sum_probs=46.0
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeC----CHHHHHHHHhCCC
Q 024711 30 TYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR----EPEAARRACADPT 94 (264)
Q Consensus 30 ~~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~----~~e~A~~Ai~~~~ 94 (264)
...+|-|.++.-..-...|++.|.+.-.|.++.+-.. .+-+.|+|+ +.++..++|+..+
T Consensus 6 ~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~------~~~~~v~~d~~~~~~~~i~~~i~~~G 68 (72)
T d1p6ta1 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLA------TETVNVIYDPAETGTAAIQEKIEKLG 68 (72)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGG------GTEEEEEECTTTSCHHHHHHHHHHHT
T ss_pred eEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcC------CCEEEEEECCCCCCHHHHHHHHHHhC
Confidence 3456889999999889999999999999999988655 346888884 3567777776543
No 100
>d1tr0a_ d.58.4.4 (A:) Boiling stable protein 1 {European aspen (Populus tremula) [TaxId: 113636]}
Probab=32.80 E-value=58 Score=21.47 Aligned_cols=57 Identities=18% Similarity=0.220 Sum_probs=36.4
Q ss_pred EcCCCCCCCHHHHHHHh-------hcCCCEEEEEEeecCCC---CCccce--EE-EEeCCHHHHHHHHhC
Q 024711 36 VGGLAWETQSETMRRYF-------EQFGEILEAVVITDKNT---GRSKGY--GF-VTFREPEAARRACAD 92 (264)
Q Consensus 36 VgnLp~~vte~~L~~~F-------~~fG~I~~v~v~~d~~t---g~skG~--gF-V~F~~~e~A~~Ai~~ 92 (264)
+-.|..+++++++.++. ...-.|+++.+-++..+ ...+|| || ++|+|.++.+.=...
T Consensus 12 lfklk~~~~~~~~~~~~~~l~~l~~~ip~i~~~~~G~~~~~~~~~~~~~~d~~l~~~F~~~e~l~~Y~~h 81 (106)
T d1tr0a_ 12 LTRFKDEITREQIDNYINDYTNLLDLIPSMKSFNWGTDLGMESAELNRGYTHAFESTFESKSGLQEYLDS 81 (106)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHHHHCTTCCEEEEEECCSCSCTTTTTTCCEEEEEEESSHHHHHHHHTC
T ss_pred EEEECCCCCHHHHHHHHHHHHHhhhcCCceEEEEEEccCCccccccCCCcCEEEEEEECCHHHHHHHhCC
Confidence 33677888877655543 45677888888776422 123454 65 689998887665543
No 101
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=30.73 E-value=41 Score=26.39 Aligned_cols=47 Identities=19% Similarity=0.287 Sum_probs=33.9
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT 94 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~ 94 (264)
....|||||.+++..-|..++.....+.++.++. ..|-|++-+...+
T Consensus 91 ~~~vvgNlPY~Iss~Il~~l~~~~~~~~~~~~m~----------------QkEvA~Ri~A~~g 137 (252)
T d1qyra_ 91 PLRVFGNLPYNISTPLMFHLFSYTDAIADMHFML----------------QKEVVNRLVAGPN 137 (252)
T ss_dssp CEEEEEECCTTTHHHHHHHHHTTGGGEEEEEEEE----------------EHHHHHHHHCCTT
T ss_pred CeEEEecchHHHHHHHHHHhcccccceehhhhhh----------------hHHHHHHhccCCC
Confidence 4577899999999999988887655565554443 3577888776644
No 102
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.61 E-value=25 Score=21.77 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=44.9
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeC----CHHHHHHHHhCCC
Q 024711 31 YTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR----EPEAARRACADPT 94 (264)
Q Consensus 31 ~~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~----~~e~A~~Ai~~~~ 94 (264)
...|-|.++.-..-...|++.+.+.-.|.++++-.. .+-+.|+|. +.++..++|+..+
T Consensus 4 ~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~------~~~v~v~~d~~~~~~~~i~~~i~~~G 65 (72)
T d2aw0a_ 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLA------NSNGTVEYDPLLTSPETLRGAIEDMG 65 (72)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETT------TTEEEEEECTTTCCHHHHHHHHHHHT
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECC------CCEEEEEECCCCCCHHHHHHHHHhhC
Confidence 356778999988888999999999888888888555 347888884 5577777777643
No 103
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=27.78 E-value=49 Score=19.78 Aligned_cols=56 Identities=18% Similarity=0.061 Sum_probs=40.8
Q ss_pred EEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeC-CHHHHHHHHhCCC
Q 024711 33 KVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR-EPEAARRACADPT 94 (264)
Q Consensus 33 ~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~-~~e~A~~Ai~~~~ 94 (264)
+|-|.++.-..-...+++.+.....|.++.+-... +...|+.. +.++..++|++.+
T Consensus 4 ~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~------~~v~v~~~~~~~~i~~~i~~~G 60 (64)
T d1sb6a_ 4 QLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTS------KKVTITSALGEEQLRTAIASAG 60 (64)
T ss_dssp EEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTT------TEEEEESSSCHHHHHHHHHHHC
T ss_pred EEEECCccchhHHHHHHHHHhcCCCeeEEEccCCC------CEEEEccCCCHHHHHHHHHHcC
Confidence 57788888888888899999887778888875553 35566665 5666777776543
No 104
>d2g1da1 d.12.1.3 (A:1-98) Ribosomal protein S24e {Thermoplasma acidophilum [TaxId: 2303]}
Probab=26.78 E-value=11 Score=25.76 Aligned_cols=47 Identities=15% Similarity=0.270 Sum_probs=24.4
Q ss_pred CCCCHHHHHHHhhc-CCCEEEEEEeecCCC----CCccceEEEEeCCHHHHHH
Q 024711 41 WETQSETMRRYFEQ-FGEILEAVVITDKNT----GRSKGYGFVTFREPEAARR 88 (264)
Q Consensus 41 ~~vte~~L~~~F~~-fG~I~~v~v~~d~~t----g~skG~gFV~F~~~e~A~~ 88 (264)
...+..+|++...+ ++.-.++.|+.+-.| +++.|||+| |+|.|.|++
T Consensus 29 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 80 (98)
T d2g1da1 29 RTPSREEIKELIAKHEGVDKELVIVDNNKQLTGKHEIEGYTKI-YADKPSAML 80 (98)
T ss_dssp SCCCHHHHHHHHHHHHHSCSTTEECCCCCCCSSSSEEEEEEEE-ESHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCcCEEEEEcCEecCCCceEEEEEEE-ECCHHHHHh
Confidence 35677777766643 443334444444333 445566655 555555444
No 105
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=26.48 E-value=55 Score=22.01 Aligned_cols=42 Identities=24% Similarity=0.257 Sum_probs=28.8
Q ss_pred HHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC
Q 024711 46 ETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT 94 (264)
Q Consensus 46 ~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~ 94 (264)
+++++.+..+|... +.+ . | |-...|..|++.++|+++.+.+.
T Consensus 66 ~~~~~~l~~~g~~~-~~m-S----G-SGst~F~l~~~~~~a~~~~~~l~ 107 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLM-S----G-SGSAFFGLAEGPDHARRAAEALR 107 (120)
T ss_dssp HHHHHHHHHTTCEE-EEE-C----T-TSSCEEEECSSHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhh-eee-c----C-CCCeEEEEeCCHHHHHHHHHHHH
Confidence 35666667777643 333 2 3 23478999999999999988754
No 106
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=25.75 E-value=68 Score=19.52 Aligned_cols=57 Identities=18% Similarity=0.218 Sum_probs=44.4
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeC----CHHHHHHHHhCCC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR----EPEAARRACADPT 94 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~----~~e~A~~Ai~~~~ 94 (264)
..|-|.++.-..-...|++.+.+.-.|.++++-.. .+-+-|+|. +.++..++|+..+
T Consensus 5 ~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~------~~~~~v~~~~~~~~~~~i~~~i~~~G 65 (72)
T d1osda_ 5 VTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFE------TRQAVVTFDDAKTSVQKLTKATADAG 65 (72)
T ss_dssp EEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETT------TTEEEEEEETTTCCHHHHHHHHHHTT
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcC------CCEEEEEECCCCCCHHHHHHHHHhcC
Confidence 45778899999999999999999999999998555 346778874 3567777777654
No 107
>d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}
Probab=23.97 E-value=61 Score=20.71 Aligned_cols=63 Identities=11% Similarity=0.137 Sum_probs=42.7
Q ss_pred EEEEcCCCCCCCHHHHHHHhhcCC-CEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcC
Q 024711 33 KVFVGGLAWETQSETMRRYFEQFG-EILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFID 98 (264)
Q Consensus 33 ~lfVgnLp~~vte~~L~~~F~~fG-~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~ 98 (264)
+++|.|-+-- -..+-.+|++-| .|+++.+-.....+.|| +-+|.-.+.+..++.++.+++.++
T Consensus 7 svlv~n~pGv--L~Ri~~lF~rRg~NI~SL~v~~te~~~iSR-~tivv~g~~~~i~qi~kQl~Klid 70 (78)
T d2fgca2 7 SMLVHNKPGV--MRKVANLFARRGFNISSITVGESETPGLSR-LVIMVKGDDKTIEQIEKQAYKLVE 70 (78)
T ss_dssp EEEEECCTTH--HHHHHHHHHTTTCEEEEEEEEECSSTTEEE-EEEEEEECTTHHHHHHHHHTTSTT
T ss_pred EEEEeCCCcH--HHHHHHHHhhCCcceEEEEEeecCCCCeEE-EEEEEEcCHHHHHHHHHHHhCCcC
Confidence 3455544432 245678898877 68888776665556666 667777788888988888776554
No 108
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=23.48 E-value=41 Score=21.51 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=41.6
Q ss_pred EEEEcCCCCCCCHHHHHHHhhcCC-CEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCCCcC
Q 024711 33 KVFVGGLAWETQSETMRRYFEQFG-EILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTPFID 98 (264)
Q Consensus 33 ~lfVgnLp~~vte~~L~~~F~~fG-~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~~i~ 98 (264)
+++|.|-+-- -..+-.+|++-| .|+++.+-.....+.|| +-+|.-.+.+..++.++.+++.++
T Consensus 5 sv~v~N~~GV--L~RisglF~rRg~NI~Sl~v~~te~~~iSR-~tivv~~~~~~i~qi~kQL~Klid 68 (76)
T d2f1fa1 5 SVLLENESGA--LSRVIGLFSQRGYNIESLTVAPTDDPTLSR-MTIQTVGDEKVLEQIEKQLHKLVD 68 (76)
T ss_dssp EEEEECCTTH--HHHHHHHHHTTTCCCSEEEEEECSCSSEEE-EEEEEESCHHHHHHHHHHHHHSTT
T ss_pred EEEEECCCcH--HHHHHHHHHhcCcceEEEEEcccCCCCeeE-EEEEEECCHHHHHHHHHHHhCCCC
Confidence 3444443332 245678888777 67887776555456665 668888899988888877665443
No 109
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.41 E-value=77 Score=19.31 Aligned_cols=57 Identities=11% Similarity=0.045 Sum_probs=43.5
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCC--HHHHHHHHhCCC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRE--PEAARRACADPT 94 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~--~e~A~~Ai~~~~ 94 (264)
.++.|.+|.-..-...|++.+.+.-.|.++.|-.. .+.+.|+|.. .++..++|+..+
T Consensus 5 ~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~------~~~~~v~~~~~~~~~i~~~i~~~G 63 (73)
T d1mwza_ 5 YSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFA------TEKLVVDADNDIRAQVESALQKAG 63 (73)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETT------TTEEEEEESSCCHHHHHHHHHHHT
T ss_pred EEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECC------CCEEEEEECCCCHHHHHHHHHHcC
Confidence 46788888888888899999999999999988655 3477888864 355566666644
No 110
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.29 E-value=47 Score=26.92 Aligned_cols=47 Identities=17% Similarity=0.303 Sum_probs=32.4
Q ss_pred CcEEEEcCCCCCCCHHHHHHHhhc---------CCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCC
Q 024711 31 YTKVFVGGLAWETQSETMRRYFEQ---------FGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPT 94 (264)
Q Consensus 31 ~~~lfVgnLp~~vte~~L~~~F~~---------fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~ 94 (264)
..-++|+|||.+++..-|..++.. ||.+ + .|.+-..|.|++.+...+
T Consensus 127 ~~~~vvaNLPy~iss~il~~~l~~~~~~~~l~~~g~~-~----------------~vlm~QkEvA~Rl~A~pg 182 (322)
T d1i4wa_ 127 DKFLTVANVTGEGSEGLIMQWLSCIGNKNWLYRFGKV-K----------------MLLWMPSTTARKLLARPG 182 (322)
T ss_dssp EEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSEE-E----------------EEEEEEHHHHHHHHCCTT
T ss_pred CceEEEEeCCchhhHHHHHHHHHhccccccccccccc-e----------------EEEEEeHHHHHHHhcCCC
Confidence 345688999999999988887753 4432 2 233345688888887744
No 111
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=22.90 E-value=13 Score=20.07 Aligned_cols=12 Identities=33% Similarity=0.617 Sum_probs=10.1
Q ss_pred CHHHHHHHhhcC
Q 024711 44 QSETMRRYFEQF 55 (264)
Q Consensus 44 te~~L~~~F~~f 55 (264)
+|++|++.|..|
T Consensus 1 seeel~eAF~~F 12 (33)
T d2hf5a1 1 SEEEIREAFRVF 12 (33)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 588999999876
No 112
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=22.60 E-value=72 Score=21.49 Aligned_cols=47 Identities=9% Similarity=0.143 Sum_probs=24.4
Q ss_pred CCCCHHHHHHHhhc-CC---CEEEE-EEeecCCCCCccceEEEEeCCHHHHHH
Q 024711 41 WETQSETMRRYFEQ-FG---EILEA-VVITDKNTGRSKGYGFVTFREPEAARR 88 (264)
Q Consensus 41 ~~vte~~L~~~F~~-fG---~I~~v-~v~~d~~tg~skG~gFV~F~~~e~A~~ 88 (264)
...+..+|++.+.+ ++ +..-| .+.+.-..+++.|||+| |+|.+.|++
T Consensus 28 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 79 (102)
T d1ywxa1 28 ATPSIKDVKMKLVAVLNANKQVLVVDTLDQIFGKLEAEGYAKI-YNDEKAMAT 79 (102)
T ss_dssp CCCCHHHHHHHHHHHHTSCSTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCcCcCEEEEEcCEecCCCCeEEEEEEE-ECCHHHHHh
Confidence 45667777665532 33 33333 23333333556666655 666666554
No 113
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=22.25 E-value=78 Score=18.97 Aligned_cols=57 Identities=12% Similarity=0.136 Sum_probs=45.5
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeC----CHHHHHHHHhCCC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR----EPEAARRACADPT 94 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~----~~e~A~~Ai~~~~ 94 (264)
..+.|.++.-..-...+++.+++.-.|.++++-.. .+-+-|+|. +.++..++|+..+
T Consensus 2 ~el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~------~~~v~v~~d~~~~~~~~i~~~i~~~G 62 (68)
T d1cpza_ 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLK------KEKAVVKFDEANVQATEICQAINELG 62 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETT------TTEEEEEECTTTCCHHHHHHHHHTTS
T ss_pred cEEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECC------CCEEEEEECCCCCCHHHHHHHHHhhC
Confidence 46789999988889999999999999999998665 347778884 4567778887754
No 114
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli [TaxId: 562]}
Probab=21.85 E-value=50 Score=20.39 Aligned_cols=37 Identities=22% Similarity=0.438 Sum_probs=20.6
Q ss_pred ccceEEEEeCCH-HHH---HHHHhCCC--CCcCCceeEEEecc
Q 024711 72 SKGYGFVTFREP-EAA---RRACADPT--PFIDGRRANCNLAS 108 (264)
Q Consensus 72 skG~gFV~F~~~-e~A---~~Ai~~~~--~~i~Gr~l~V~~a~ 108 (264)
.||||||+-++- ++. ..+|+..+ ....|.++.+++..
T Consensus 14 ~kGfGFI~~d~g~~diFvH~s~l~~~~~~~L~~G~~V~f~~~~ 56 (69)
T d1mjca_ 14 DKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIES 56 (69)
T ss_dssp TTTEEEEEETTSCCCEEEEGGGBCCTTTCCCCTTCEEEEEEEC
T ss_pred CCCEEEEEEcCCCccEEEEhHHhcccCCCcCCCCCEEEEEEEe
Confidence 389999987653 221 13444322 22457777776653
No 115
>d1rjja_ d.58.4.4 (A:) Hypothetical protein AT5G22580 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.47 E-value=1e+02 Score=20.34 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=34.8
Q ss_pred EcCCCCCCCHHHHHHHhhc----CCCEEEEEEeecCC--CCCccce--EE-EEeCCHHHHHHHHh
Q 024711 36 VGGLAWETQSETMRRYFEQ----FGEILEAVVITDKN--TGRSKGY--GF-VTFREPEAARRACA 91 (264)
Q Consensus 36 VgnLp~~vte~~L~~~F~~----fG~I~~v~v~~d~~--tg~skG~--gF-V~F~~~e~A~~Ai~ 91 (264)
+-.|-++++.+++.+.+.. .-.|+++.+-++-. ....++| +| ++|+|.++.+.=..
T Consensus 11 lfklk~~~~~e~i~~~l~~L~~~Ip~i~~~~~G~~~~~~~~~~~~~d~~l~~~F~~~e~l~~Y~~ 75 (111)
T d1rjja_ 11 VVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTS 75 (111)
T ss_dssp EEECSSCCCHHHHHHHHHHHHGGGGGSCEEEEEEECCSCTTTSTTCCEEEEEEESSHHHHHHHHT
T ss_pred EEEECCCCCHHHHHHHHHHHHhcCccceEEEEeccCCCcccccCCccEEEEEEEcCHHHHHHHhC
Confidence 3356778888887777653 44566777665432 1334454 65 58999888665444
No 116
>d1nija2 d.237.1.1 (A:224-318) Hypothetical protein YjiA, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.26 E-value=33 Score=22.46 Aligned_cols=27 Identities=26% Similarity=0.400 Sum_probs=21.2
Q ss_pred CCCCCcEEEEcCCCCCCCHHHHHHHhhcCC
Q 024711 27 GDTTYTKVFVGGLAWETQSETMRRYFEQFG 56 (264)
Q Consensus 27 ~~~~~~~lfVgnLp~~vte~~L~~~F~~fG 56 (264)
++..++-|||| .++++++|++.|..|-
T Consensus 68 ~~r~~~lVfIG---~~Ld~~~l~~~l~~c~ 94 (95)
T d1nija2 68 EKPHSTMVFIG---IQLPEEEIRAAFAGLR 94 (95)
T ss_dssp SCCCEEEEEEE---ESCCHHHHHHHHHTTC
T ss_pred CCCCCEEEEEe---CCCCHHHHHHHHHHhc
Confidence 44567789998 4788999999998763
No 117
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=20.91 E-value=89 Score=19.14 Aligned_cols=46 Identities=4% Similarity=-0.022 Sum_probs=30.2
Q ss_pred HHHHHHhhcCC-CEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCCCC
Q 024711 46 ETMRRYFEQFG-EILEAVVITDKNTGRSKGYGFVTFREPEAARRACADPTP 95 (264)
Q Consensus 46 ~~L~~~F~~fG-~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~~~ 95 (264)
.++-++|.+.| .|..+.+.... .++.--+..+|.+.|.++|++.+-
T Consensus 14 ~~v~~~L~~~~InI~~~y~~~~~----~~~~~vl~vdd~~~a~~~L~~~G~ 60 (71)
T d2f06a1 14 AKVLGFLSAEGVFIEYMYSFANN----NVANVVIRPSNMDKCIEVLKEKKV 60 (71)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCEEEEEEEcCC----CcEEEEEEECCHHHHHHHHHHCCC
Confidence 34666777666 67777665442 234444556799999999988663
No 118
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.81 E-value=35 Score=27.29 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=31.5
Q ss_pred cEEEEcCCCCCCCHHHHHHHhhcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC
Q 024711 32 TKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP 93 (264)
Q Consensus 32 ~~lfVgnLp~~vte~~L~~~F~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~ 93 (264)
....|+|||.+++..-|..++...-.+.++.+|. ..|-|++.+..-
T Consensus 87 ~~~vV~NLPY~Iss~il~~~~~~~~~~~~~v~m~----------------QkEvA~Rl~A~p 132 (278)
T d1zq9a1 87 FDTCVANLPYQISSPFVFKLLLHRPFFRCAILMF----------------QREFALRLVAKP 132 (278)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEE----------------EHHHHHHHHCCT
T ss_pred hhhhhcchHHHHHHHHHHHHHhhCCccceeeEee----------------cHHHHHHHhhhh
Confidence 3467999999999999988876543444433332 357777777653
No 119
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.68 E-value=20 Score=23.42 Aligned_cols=49 Identities=10% Similarity=0.017 Sum_probs=30.0
Q ss_pred CCCCCCHHHHHHHh-hcCCCEEEEEEeecCCCCCccceEEEEeCCHHHHHHHHhCC
Q 024711 39 LAWETQSETMRRYF-EQFGEILEAVVITDKNTGRSKGYGFVTFREPEAARRACADP 93 (264)
Q Consensus 39 Lp~~vte~~L~~~F-~~fG~I~~v~v~~d~~tg~skG~gFV~F~~~e~A~~Ai~~~ 93 (264)
|+.+++-.+|++.. .+|. +..++|-.-.+.| -+|++.+-++.+.||+..
T Consensus 28 l~~~it~~dL~~kI~~rf~-~~~~~lkY~Dedg-----d~v~i~sD~Dl~~ai~~~ 77 (85)
T d1ip9a_ 28 LKGDTTYKELRSKIAPRID-TDNFKLQTKLFDG-----SGEEIKTDSQVSNIIQAK 77 (85)
T ss_dssp ECSCCCHHHHHHHHHHHHT-SSCEEEEECCSSS-----CCSCCCSHHHHHHHHHTT
T ss_pred eCCCCCHHHHHHHHHHHhC-CCceEEEEEcCCC-----CEEEEeCHHHHHHHHHhc
Confidence 57788888776554 3443 2233332211112 258999999999999864
No 120
>d2i9xa1 d.366.1.1 (A:1-84) Putative septation protein SpoVG {Staphylococcus epidermidis [TaxId: 1282]}
Probab=20.47 E-value=62 Score=21.05 Aligned_cols=26 Identities=19% Similarity=0.257 Sum_probs=19.6
Q ss_pred CEEEEEEeecCCCCCccceEEEEeCC
Q 024711 57 EILEAVVITDKNTGRSKGYGFVTFRE 82 (264)
Q Consensus 57 ~I~~v~v~~d~~tg~skG~gFV~F~~ 82 (264)
+|++++|-.-...|+-|+||=|+|.+
T Consensus 2 ~ITdVrI~~i~~~gklkA~asvt~d~ 27 (84)
T d2i9xa1 2 KVTDVRLRKIQTDGRMKALVSITLDE 27 (84)
T ss_dssp CEEEEEEEECCSSSSEEEEEEEEETT
T ss_pred eeEEEEEEEecCCCCEEEEEEEEECC
Confidence 47788775544458889999999976
No 121
>d2ia9a1 d.366.1.1 (A:1-92) Putative septation protein SpoVG {Bacillus subtilis [TaxId: 1423]}
Probab=20.38 E-value=61 Score=21.49 Aligned_cols=26 Identities=15% Similarity=0.279 Sum_probs=19.8
Q ss_pred CEEEEEEeecCCCCCccceEEEEeCC
Q 024711 57 EILEAVVITDKNTGRSKGYGFVTFRE 82 (264)
Q Consensus 57 ~I~~v~v~~d~~tg~skG~gFV~F~~ 82 (264)
+|++|+|-.-...|+-|+||=|+|.+
T Consensus 2 ~ITdVrI~~i~~~g~lkA~asvt~d~ 27 (92)
T d2ia9a1 2 EVTDVRLRRVNTDGRMRAIASITLDH 27 (92)
T ss_dssp CEEEEEEEECCSSSSEEEEEEEEETT
T ss_pred eeEEEEEEEecCCCCEEEEEEEEECC
Confidence 47778776554468889999999975
Done!