BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024713
(263 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65355|GGH_ARATH Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2
Length = 347
Score = 336 bits (862), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 205/263 (77%), Gaps = 9/263 (3%)
Query: 1 MWGYLWIPIL-FSLSKEFSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRCPVPDSKLNY 59
MW Y+W+P++ SL K+ + + ILLPSQ + + P C PD LNY
Sbjct: 1 MWSYVWLPLVALSLFKDSIIMAKAATILLPSQTGFDISRS--------PVCSAPDPNLNY 52
Query: 60 RPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLEL 119
RPVIGI++HPGDGASGRL+NAT+AS IAASYVK ES GARVIPLI+NEPE++LF+KLEL
Sbjct: 53 RPVIGILSHPGDGASGRLSNATDASSIAASYVKLAESGGARVIPLIFNEPEEILFQKLEL 112
Query: 120 VNGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNIL 179
VNGV+ TGGWAK+GLY+ IV+K+F K+LE+NDAG+HFP+YA CLGFELLTMIIS++++I
Sbjct: 113 VNGVILTGGWAKEGLYFEIVKKIFNKVLERNDAGEHFPIYAICLGFELLTMIISQNRDIF 172
Query: 180 ESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLD 239
E +A + AS+LQF+EN +I+GT+FQRFPP+L+KKL TDCLVMQNH +GISP++ N+
Sbjct: 173 EKMDARNSASSLQFVENVNIQGTIFQRFPPELLKKLGTDCLVMQNHRFGISPQSFEGNIA 232
Query: 240 LSRFFKMLTTSADEDNKCKPMTI 262
LS FFK++TT D++ K T+
Sbjct: 233 LSNFFKIVTTCVDDNGKVYVSTV 255
>sp|P93164|GGH_SOYBN Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1
Length = 342
Score = 254 bits (649), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/241 (53%), Positives = 160/241 (66%), Gaps = 10/241 (4%)
Query: 17 FSSVEAQSKILLPSQRQRQQNDAVSSLSVLVPRCPVPDSKLNYRPVIGIVTHPGDGASGR 76
S+ I LPSQ +D+VS C D LNY+PVIGI+THPGDGASGR
Sbjct: 20 LSATSHDDHIFLPSQLH--DDDSVS--------CTATDPSLNYKPVIGILTHPGDGASGR 69
Query: 77 LNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKLELVNGVLYTGGWAKDGLYY 136
L+NAT SYIAASYVKFVES GARVIPLIYNE + L +KL+LVNGVL+TGGWA G Y
Sbjct: 70 LSNATGVSYIAASYVKFVESGGARVIPLIYNESPENLNKKLDLVNGVLFTGGWAVSGPYL 129
Query: 137 AIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMEN 196
+ +FKK LE+NDAGDHFP+ A LG L+ I+S+ +ILE F A+ S+L
Sbjct: 130 DTLGNIFKKALERNDAGDHFPVIAFNLGGNLVIRIVSEQTDILEPFTASSLPSSLVLWNE 189
Query: 197 TSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRFFKMLTTSADEDNK 256
+ +G++FQRFP L+ +L TDCLV+ NH Y ISP L+ N LS FF++L TS D D K
Sbjct: 190 ANAKGSLFQRFPSDLLTQLKTDCLVLHNHRYAISPRKLQYNTKLSDFFEILATSGDRDGK 249
Query: 257 C 257
Sbjct: 250 T 250
>sp|Q54LN4|GGHA_DICDI Gamma-glutamyl hydrolase A OS=Dictyostelium discoideum GN=gghA PE=3
SV=1
Length = 317
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 125/211 (59%), Gaps = 8/211 (3%)
Query: 55 SKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLF 114
+K+N RP+IGI+T P DG + YIAASYVK++ESAGARV+P++Y+ L
Sbjct: 24 TKINNRPIIGILTQPTDGDMTTFG----SQYIAASYVKYIESAGARVVPILYDIDIKSLT 79
Query: 115 EKLELVNGVLYTGG---WAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMI 171
E + +NGV + GG + +Y ++ ++ +++E N+ GD+FPL+ C+GF+ L ++
Sbjct: 80 ELMGSINGVFFPGGGVDFNNQTVYTDTIQSIWSQVVEFNNNGDYFPLWGTCMGFQELALL 139
Query: 172 ISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISP 231
+ + N+L S+N+ + L F + +F +++ L+++ + M NH +G+SP
Sbjct: 140 SADNFNLLSSYNSENYTVPLNFTS-LAAGSRLFSLASSSIMQSLASEPITMNNHQFGLSP 198
Query: 232 ETLRKNLDLSRFFKMLTTSADEDNKCKPMTI 262
+T ++ ++ FF +L+T+ D D TI
Sbjct: 199 QTYQQTSSINTFFDVLSTNVDRDGNTFISTI 229
>sp|Q54HL4|GGHB_DICDI Gamma-glutamyl hydrolase B OS=Dictyostelium discoideum GN=gghB PE=3
SV=1
Length = 347
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 118/202 (58%), Gaps = 7/202 (3%)
Query: 55 SKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLF 114
+ +N PVIGI+T P + +N +Y+ ASYVK+VESAGARV+P+ YN+ ++ L
Sbjct: 21 NTINNTPVIGILTQPFPSS---INIKYGDNYLMASYVKYVESAGARVVPIFYNQDDESLT 77
Query: 115 EKLELVNGVLYTGG---WAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMI 171
+ +NG+L GG + + Y + ++ +L+ N GD+FPL+ CLG E + +
Sbjct: 78 TIFKQINGILLPGGDVDFKTEIQYVKTLTLIWDYVLDVNINGDYFPLWGTCLGLEEIVSL 137
Query: 172 ISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISP 231
++ ++L FNA + + L F N ++E + + P +I L+ D + M NHH+GISP
Sbjct: 138 QAESFDVLTDFNAENYSIPLNF-SNIALESKIMKNCPTNIINSLANDPITMNNHHFGISP 196
Query: 232 ETLRKNLDLSRFFKMLTTSADE 253
T N L++FF +L T+ D+
Sbjct: 197 NTFDNNSLLNQFFNVLATNNDK 218
>sp|Q9Z0L8|GGH_MOUSE Gamma-glutamyl hydrolase OS=Mus musculus GN=Ggh PE=1 SV=2
Length = 317
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 116/208 (55%), Gaps = 10/208 (4%)
Query: 48 PRCPVPDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYN 107
P P + + RP+IG+V G +L N YIAASYVK++ESAGARV+P I
Sbjct: 21 PGMSRPYNHGSERPIIGVVMQECFGKMAKLGNY----YIAASYVKYIESAGARVVP-IRP 75
Query: 108 EPEDVLFEKL-ELVNGVLYTGGWAK--DGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLG 164
+ D +E+L +NGVL GG A D Y + + F K LE D GDHFP++ CLG
Sbjct: 76 DLSDAEYEELFRSINGVLLPGGGANLTDSGYSRVAKIFFSKALESFDNGDHFPVWGTCLG 135
Query: 165 FELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQN 224
FE L++++S + N+L S + + L F E + +F+ FP +L+ L+ + L
Sbjct: 136 FEELSVLVSGE-NLLTSTDTKSKKLPLNFTEGAR-KSRMFKHFPTELLDSLALENLTANF 193
Query: 225 HHYGISPETLRKNLDLSRFFKMLTTSAD 252
H + +S + +N L +FF +LTT+ D
Sbjct: 194 HKWSLSVKNFTENEKLKKFFNILTTNTD 221
>sp|Q62867|GGH_RAT Gamma-glutamyl hydrolase OS=Rattus norvegicus GN=Ggh PE=1 SV=1
Length = 317
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 107/196 (54%), Gaps = 10/196 (5%)
Query: 60 RPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPEDVLFEKL-E 118
RP+IGI+ G +L YIAASYVKF+ESAGARV+P I + D +E L
Sbjct: 33 RPIIGIIMQECYGNMTKLGRF----YIAASYVKFIESAGARVVP-IRLDLNDAQYETLFR 87
Query: 119 LVNGVLYTGGWAK--DGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDK 176
+NGVL GG A Y + + F K LE D GD+FP++ CLG E L++++S D
Sbjct: 88 SINGVLLPGGGANLTHSGYSRVAKIFFTKALESFDNGDYFPVWGTCLGLEELSVLVSND- 146
Query: 177 NILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETLRK 236
N+L N + L F + S + +F+ P +L+ L+++ L H + +S + +
Sbjct: 147 NLLTLTNTSSVKLPLNFTRD-SKQSRMFRNLPEELLNSLASENLTANFHKWSLSVKNFTE 205
Query: 237 NLDLSRFFKMLTTSAD 252
N L +FF +LT + D
Sbjct: 206 NEKLKKFFNILTVNTD 221
>sp|Q92820|GGH_HUMAN Gamma-glutamyl hydrolase OS=Homo sapiens GN=GGH PE=1 SV=2
Length = 318
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 13/205 (6%)
Query: 53 PDSKLNYRPVIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPE-- 110
P +P+IGI+ ++ YIAASYVK++ESAGARV+P+ + E
Sbjct: 26 PHGDTAKKPIIGILMQK---CRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKD 82
Query: 111 -DVLFEKLELVNGVLYTGGWAK-DGLYYAIVEKVFKKI-LEKNDAGDHFPLYAHCLGFEL 167
++LF+ +NG+L+ GG YA V K+F + ++ D GD+FP++ CLGFE
Sbjct: 83 YEILFKS---INGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEE 139
Query: 168 LTMIISKDKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHY 227
L+++IS + +L + + D A L F + +FQ FP +L+ L+ + L H +
Sbjct: 140 LSLLISGE-CLLTATDTVDVAMPLNFT-GGQLHSRMFQNFPTELLLSLAVEPLTANFHKW 197
Query: 228 GISPETLRKNLDLSRFFKMLTTSAD 252
+S + N L +FF +LTT+ D
Sbjct: 198 SLSVKNFTMNEKLKKFFNVLTTNTD 222
>sp|A7YWG4|GGH_BOVIN Gamma-glutamyl hydrolase OS=Bos taurus GN=GGH PE=2 SV=1
Length = 318
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 107/200 (53%), Gaps = 17/200 (8%)
Query: 62 VIGIVTHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPL---IYNEPEDVLFEKLE 118
+IGI+ + R A YIAASYVKF+ESAGARV+P+ + NE + LF+
Sbjct: 35 IIGILMQKCHNKNMR---ALGKYYIAASYVKFLESAGARVVPVRLDLKNEEYEKLFKS-- 89
Query: 119 LVNGVLYTGG---WAKDGLYYAIVEKVFKKI-LEKNDAGDHFPLYAHCLGFELLTMIISK 174
+NGVL+ GG + G YA V K+F + ++ GD+FP++ CLGFE L ++S
Sbjct: 90 -INGVLFPGGSVNLMRSG--YARVAKMFYNLSIKSFGEGDYFPVWGTCLGFEELIYLVSG 146
Query: 175 DKNILESFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDCLVMQNHHYGISPETL 234
+ ++L + L F T ++ +FQ FP L+ L+ + L H + +S
Sbjct: 147 E-SLLTLTDTVGIKLPLNFSRGT-LQSRMFQNFPADLLLSLAVEPLTAHFHKWSLSVMNF 204
Query: 235 RKNLDLSRFFKMLTTSADED 254
KN L FF +LTT+ D +
Sbjct: 205 TKNEKLKAFFSILTTNTDGN 224
>sp|A1D5Z0|GUF1_NEOFI Translation factor guf1, mitochondrial OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=guf1 PE=3 SV=1
Length = 683
Score = 34.3 bits (77), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 78 NNATNASYIAASYVKFVESAGARVIPLIYN------EPEDVLFE-----KLELVNGVLYT 126
+ A +A Y+ F + G +IP+I EPE L + +L+ N V+ +
Sbjct: 167 SQGIQAQTVANFYLAFAQ--GLELIPVINKVDLPSAEPERALEQMKNSFELDTENAVMVS 224
Query: 127 GGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTM 170
AK GL VEK+ ++EK A +FP+Y H L F LLT+
Sbjct: 225 ---AKTGLN---VEKLLPTVIEKIPAYGYFPVYLHKL-FPLLTL 261
>sp|P34043|GPA5_DICDI Guanine nucleotide-binding protein alpha-5 subunit OS=Dictyostelium
discoideum GN=gpaE PE=3 SV=2
Length = 347
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 108 EPEDVLFEKLELVNGVLYTGGWAKDGLYYAIVEKV--FKKILEKNDAGDHFPLYAHCLGF 165
E ++ + E L L + ++ W ++ + KV F++ + K D GD+FP Y L F
Sbjct: 233 ESQNRMKESLMLFDEIV-NSHWFRNTAFIIFFNKVDLFREKIAKIDLGDYFPAYTGGLSF 291
Query: 166 ELLTMIISK--------DKNILESFNAADQASTLQFM 194
+ T I K ++ I F A + +QF+
Sbjct: 292 DNSTQFIKKMFLDLSTGNQRIFAHFTCAIDTANIQFV 328
>sp|B4S5S1|CARA_PROA2 Carbamoyl-phosphate synthase small chain OS=Prosthecochloris
aestuarii (strain DSM 271 / SK 413) GN=carA PE=3 SV=1
Length = 371
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 86 IAASYVKFVESAGARVIPLIYNEPEDVLFEKLEL-VNGVLYTGGWAKD-GLYYAIVEKVF 143
I + ++ +++A +V L N P + E L+L +G+ + G + YAI
Sbjct: 186 IKQNILRMLQNAKCKVTVLNANTP---IEEALKLDPDGIFLSNGPGDPFAVTYAIDN--I 240
Query: 144 KKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILESFNAADQASTLQFMENTSIEGTV 203
KK+ E N PL+ CLG +L+++ +F A + L+F + S
Sbjct: 241 KKLAEHNTQQKPVPLFGICLGHQLMSL----------AFGA--KTYKLKFGHHGS----- 283
Query: 204 FQRFPPKLIKKLSTDCLVMQNHHYGISPETLRKNLDLSRF 243
P K +K S + + QNH + ++ E+L ++L+++
Sbjct: 284 --NHPVKNLKSSSIE-ITSQNHGFAVAMESLPESLEMTHL 320
>sp|P07258|CARA_YEAST Carbamoyl-phosphate synthase arginine-specific small chain
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CPA1 PE=1 SV=1
Length = 411
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 24/118 (20%)
Query: 121 NGVLYTGGWAKDGLYYAIVEKVFKKILEKNDAGDHFPLYAHCLGFELLTMIISKDKNILE 180
+G+ + G L A + V + L N D P++ CLG +LL + + L+
Sbjct: 225 DGIFLSNGPGNPELCQATISNV--RELLNNPVYDCIPIFGICLGHQLLALASGASTHKLK 282
Query: 181 SFNAADQASTLQFMENTSIEGTVFQRFPPKLIKKLSTDC-LVMQNHHYGISPETLRKN 237
N A + + C + QNH Y + PETL K+
Sbjct: 283 YGNRAHNIPAMDLT---------------------TGQCHITSQNHGYAVDPETLPKD 319
>sp|P48813|GNP1_YEAST High-affinity glutamine permease OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GNP1 PE=1 SV=2
Length = 663
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 18/91 (19%)
Query: 48 PRCPVPDS--KLNYR---------PVIG-IVTHPGDGASGRLNNATNASYIAASYVKFVE 95
PR +P + K+ YR ++G +V + D G +AT AS YV V
Sbjct: 371 PRKAIPSAAKKMIYRILFVFLASLTLVGFLVPYTSDQLLGAAGSATKAS----PYVIAVS 426
Query: 96 SAGARVIPLIYNEPEDVLFEKLELVNGVLYT 126
S G RV+P N +L L + NG YT
Sbjct: 427 SHGVRVVPHFINAV--ILLSVLSVANGAFYT 455
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,071,154
Number of Sequences: 539616
Number of extensions: 3947415
Number of successful extensions: 9338
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 9314
Number of HSP's gapped (non-prelim): 19
length of query: 263
length of database: 191,569,459
effective HSP length: 115
effective length of query: 148
effective length of database: 129,513,619
effective search space: 19168015612
effective search space used: 19168015612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)