Query 024714
Match_columns 263
No_of_seqs 126 out of 445
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 13:10:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024714.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024714hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 4.3E-96 1E-100 653.7 26.3 237 7-245 3-241 (248)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 1.5E-95 5E-100 652.9 26.4 237 1-240 25-261 (261)
3 3iqu_A 14-3-3 protein sigma; s 100.0 1.7E-95 6E-100 646.1 23.8 231 6-238 6-236 (236)
4 1o9d_A 14-3-3-like protein C; 100.0 2.9E-95 1E-99 653.2 25.4 252 1-252 1-252 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 6.3E-93 2.2E-97 630.5 26.2 233 4-239 2-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 9.1E-92 3.1E-96 630.1 23.9 234 6-240 26-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 1.7E-88 5.9E-93 608.7 17.5 227 7-243 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 1.4E-80 4.9E-85 546.6 20.8 215 7-235 2-226 (227)
9 3edt_B KLC 2, kinesin light ch 95.6 0.31 1.1E-05 39.8 13.6 58 152-210 144-201 (283)
10 3nf1_A KLC 1, kinesin light ch 93.9 2.3 7.9E-05 35.1 20.2 187 9-210 28-227 (311)
11 3vtx_A MAMA; tetratricopeptide 93.6 2 6.8E-05 33.3 17.0 162 9-206 6-169 (184)
12 3n71_A Histone lysine methyltr 93.0 1.5 5.3E-05 41.8 13.6 100 97-210 326-425 (490)
13 3u4t_A TPR repeat-containing p 92.3 3.9 0.00013 33.3 13.7 53 153-206 197-249 (272)
14 3u3w_A Transcriptional activat 91.3 6.1 0.00021 33.4 18.4 57 152-210 172-228 (293)
15 3qwp_A SET and MYND domain-con 91.0 0.45 1.5E-05 44.6 7.2 58 152-210 346-403 (429)
16 3qww_A SET and MYND domain-con 90.9 1.6 5.4E-05 41.0 10.8 101 97-211 315-415 (433)
17 3hym_B Cell division cycle pro 90.9 6.2 0.00021 32.8 14.0 45 152-205 253-297 (330)
18 3edt_B KLC 2, kinesin light ch 90.6 1.7 5.9E-05 35.2 9.6 56 152-208 102-157 (283)
19 3ulq_A Response regulator aspa 89.9 3.4 0.00012 36.2 11.7 73 123-209 101-174 (383)
20 3fp2_A TPR repeat-containing p 89.6 11 0.00039 33.8 16.0 49 151-208 444-492 (537)
21 4a1s_A PINS, partner of inscut 89.5 9.9 0.00034 33.0 22.4 189 9-209 49-254 (411)
22 1fch_A Peroxisomal targeting s 89.5 9.1 0.00031 32.5 14.2 59 9-71 99-157 (368)
23 3qww_A SET and MYND domain-con 89.4 0.67 2.3E-05 43.6 6.8 58 152-210 315-372 (433)
24 4i17_A Hypothetical protein; T 88.7 8 0.00027 30.9 13.2 60 9-71 8-67 (228)
25 4g1t_A Interferon-induced prot 88.5 13 0.00044 33.0 16.5 49 152-205 351-399 (472)
26 3n71_A Histone lysine methyltr 88.4 0.82 2.8E-05 43.7 6.8 58 152-210 326-383 (490)
27 3ulq_A Response regulator aspa 87.8 13 0.00045 32.4 16.4 176 13-209 108-295 (383)
28 3sf4_A G-protein-signaling mod 86.2 15 0.00052 31.3 22.7 194 5-209 6-218 (406)
29 4abn_A Tetratricopeptide repea 85.9 21 0.00072 32.8 16.1 173 9-206 103-286 (474)
30 2gw1_A Mitochondrial precursor 85.9 18 0.00062 32.1 15.3 55 151-206 205-265 (514)
31 3q15_A PSP28, response regulat 85.6 5.5 0.00019 34.9 10.2 75 122-209 98-172 (378)
32 3ieg_A DNAJ homolog subfamily 85.4 15 0.00051 30.6 17.8 46 152-206 289-334 (359)
33 4gcn_A Protein STI-1; structur 85.3 2.4 8.1E-05 31.7 6.7 47 152-207 25-71 (127)
34 3qwp_A SET and MYND domain-con 84.6 0.94 3.2E-05 42.4 4.9 58 152-210 304-361 (429)
35 2xpi_A Anaphase-promoting comp 84.0 26 0.00087 32.1 17.6 47 151-206 532-578 (597)
36 2pl2_A Hypothetical conserved 83.8 16 0.00053 29.5 13.0 58 9-70 6-63 (217)
37 2q7f_A YRRB protein; TPR, prot 82.4 16 0.00056 28.7 16.2 59 9-71 58-116 (243)
38 3ro2_A PINS homolog, G-protein 82.3 19 0.00065 29.4 18.1 55 152-209 200-254 (338)
39 4gyw_A UDP-N-acetylglucosamine 82.2 25 0.00084 35.0 14.3 44 9-55 10-53 (723)
40 4b4t_Q 26S proteasome regulato 81.9 26 0.00087 30.6 18.3 179 11-209 58-247 (434)
41 3ro2_A PINS homolog, G-protein 81.7 20 0.00068 29.2 22.2 190 9-210 6-215 (338)
42 3ro3_A PINS homolog, G-protein 81.6 12 0.00042 26.8 15.4 54 152-208 106-159 (164)
43 3qky_A Outer membrane assembly 81.5 20 0.0007 29.2 17.6 67 8-75 15-81 (261)
44 2y4t_A DNAJ homolog subfamily 80.9 28 0.00096 30.4 15.7 46 152-206 312-357 (450)
45 3sf4_A G-protein-signaling mod 80.1 27 0.00092 29.7 19.4 178 10-208 49-257 (406)
46 2y4t_A DNAJ homolog subfamily 79.9 30 0.001 30.2 16.1 167 12-206 147-323 (450)
47 3rkv_A Putative peptidylprolyl 79.0 3 0.0001 31.9 5.2 54 152-206 28-91 (162)
48 4eqf_A PEX5-related protein; a 78.4 30 0.001 29.4 14.9 44 10-56 67-110 (365)
49 2gw1_A Mitochondrial precursor 78.3 36 0.0012 30.1 14.6 48 151-207 431-478 (514)
50 3ro3_A PINS homolog, G-protein 77.8 7.4 0.00025 28.1 6.9 55 152-209 26-80 (164)
51 3u3w_A Transcriptional activat 77.1 13 0.00044 31.4 9.2 53 152-208 132-185 (293)
52 4eqf_A PEX5-related protein; a 77.0 34 0.0011 29.1 16.7 30 9-38 100-129 (365)
53 2xpi_A Anaphase-promoting comp 76.5 45 0.0016 30.4 19.2 55 151-207 491-545 (597)
54 4gco_A Protein STI-1; structur 76.1 7.6 0.00026 28.8 6.7 46 152-206 30-75 (126)
55 2ho1_A Type 4 fimbrial biogene 75.7 28 0.00097 27.6 14.8 164 10-206 39-203 (252)
56 4a1s_A PINS, partner of inscut 75.6 38 0.0013 29.1 18.3 179 10-209 88-294 (411)
57 3ieg_A DNAJ homolog subfamily 74.5 35 0.0012 28.2 18.3 167 12-207 124-301 (359)
58 3hym_B Cell division cycle pro 74.4 35 0.0012 28.0 17.0 56 151-207 209-265 (330)
59 1fch_A Peroxisomal targeting s 73.8 39 0.0013 28.4 18.4 58 9-70 65-122 (368)
60 2qfc_A PLCR protein; TPR, HTH, 73.2 7.8 0.00027 32.7 6.7 73 124-208 154-226 (293)
61 3q15_A PSP28, response regulat 73.0 46 0.0016 28.8 19.2 54 151-208 238-291 (378)
62 1qqe_A Vesicular transport pro 72.8 42 0.0014 28.2 12.8 51 152-206 135-186 (292)
63 3fp2_A TPR repeat-containing p 71.9 54 0.0019 29.2 18.0 54 153-206 213-271 (537)
64 1elr_A TPR2A-domain of HOP; HO 71.2 12 0.0004 26.1 6.3 53 152-206 55-107 (131)
65 4gcn_A Protein STI-1; structur 70.6 12 0.00041 27.6 6.6 52 152-205 59-110 (127)
66 3cv0_A Peroxisome targeting si 70.6 42 0.0015 27.4 16.0 44 9-55 22-65 (327)
67 1xnf_A Lipoprotein NLPI; TPR, 70.5 39 0.0013 26.9 12.7 57 10-70 45-101 (275)
68 2vq2_A PILW, putative fimbrial 70.4 34 0.0012 26.2 16.0 167 9-207 9-176 (225)
69 3gw4_A Uncharacterized protein 70.3 14 0.00048 28.3 7.1 74 123-208 64-137 (203)
70 2l6j_A TPR repeat-containing p 69.0 15 0.00052 25.1 6.5 45 152-205 21-65 (111)
71 3uq3_A Heat shock protein STI1 68.9 40 0.0014 26.4 15.8 29 10-38 40-68 (258)
72 4g1t_A Interferon-induced prot 68.7 11 0.00036 33.6 6.8 53 152-205 68-121 (472)
73 1na3_A Designed protein CTPR2; 67.8 19 0.00067 23.5 6.7 46 152-206 26-71 (91)
74 3u4t_A TPR repeat-containing p 67.4 46 0.0016 26.6 11.7 49 151-208 158-209 (272)
75 1hz4_A MALT regulatory protein 66.7 18 0.0006 31.2 7.7 55 152-207 110-164 (373)
76 2qfc_A PLCR protein; TPR, HTH, 66.7 55 0.0019 27.3 22.4 188 10-221 77-276 (293)
77 3k9i_A BH0479 protein; putativ 66.7 18 0.00061 25.8 6.7 47 152-207 44-90 (117)
78 3lf9_A 4E10_D0_1IS1A_001_C (T1 65.7 34 0.0011 26.7 8.1 49 22-70 11-60 (121)
79 2kck_A TPR repeat; tetratricop 65.1 22 0.00076 23.8 6.7 46 152-206 23-68 (112)
80 2ifu_A Gamma-SNAP; membrane fu 65.0 63 0.0022 27.3 13.7 24 15-38 43-66 (307)
81 2q7f_A YRRB protein; TPR, prot 64.7 48 0.0016 25.8 11.6 60 9-72 24-83 (243)
82 2pl2_A Hypothetical conserved 63.9 54 0.0018 26.1 17.1 45 9-56 40-84 (217)
83 2xev_A YBGF; tetratricopeptide 63.8 30 0.001 24.3 7.4 49 152-206 56-104 (129)
84 2dba_A Smooth muscle cell asso 63.6 17 0.00057 26.1 6.0 49 152-206 45-93 (148)
85 3uq3_A Heat shock protein STI1 63.6 51 0.0018 25.8 15.6 30 9-38 80-109 (258)
86 3sz7_A HSC70 cochaperone (SGT) 63.2 35 0.0012 25.6 8.1 47 152-207 62-108 (164)
87 3qky_A Outer membrane assembly 63.0 59 0.002 26.3 12.0 64 12-75 152-224 (261)
88 2ifu_A Gamma-SNAP; membrane fu 62.8 69 0.0024 27.0 12.3 51 152-205 172-222 (307)
89 2kc7_A BFR218_protein; tetratr 62.3 28 0.00097 23.5 6.8 47 152-206 17-63 (99)
90 4gyw_A UDP-N-acetylglucosamine 60.4 1.4E+02 0.0046 29.6 15.6 136 9-212 44-179 (723)
91 3ma5_A Tetratricopeptide repea 58.9 42 0.0014 23.2 9.4 72 152-238 24-95 (100)
92 3upv_A Heat shock protein STI1 58.9 30 0.001 24.6 6.7 46 152-206 21-66 (126)
93 2hr2_A Hypothetical protein; a 58.5 33 0.0011 27.6 7.4 54 151-206 27-85 (159)
94 2e2e_A Formate-dependent nitri 58.5 56 0.0019 24.5 12.5 46 152-206 98-143 (177)
95 2vgx_A Chaperone SYCD; alterna 58.1 32 0.0011 26.0 7.0 47 152-207 72-118 (148)
96 4gco_A Protein STI-1; structur 58.0 30 0.001 25.4 6.7 46 152-206 64-109 (126)
97 2lni_A Stress-induced-phosphop 57.0 35 0.0012 23.7 6.7 47 152-207 67-113 (133)
98 3rkv_A Putative peptidylprolyl 56.1 60 0.002 24.2 9.3 69 152-237 80-148 (162)
99 3q49_B STIP1 homology and U bo 55.8 36 0.0012 24.1 6.7 15 191-205 56-70 (137)
100 1elr_A TPR2A-domain of HOP; HO 55.6 39 0.0013 23.2 6.7 49 152-209 21-69 (131)
101 3as5_A MAMA; tetratricopeptide 55.0 59 0.002 23.7 15.8 58 10-71 10-67 (186)
102 3upv_A Heat shock protein STI1 54.5 39 0.0013 23.9 6.7 48 152-208 55-102 (126)
103 3vtx_A MAMA; tetratricopeptide 54.3 35 0.0012 25.8 6.7 46 152-206 22-67 (184)
104 3nf1_A KLC 1, kinesin light ch 53.9 85 0.0029 25.3 19.8 28 10-37 71-98 (311)
105 2kat_A Uncharacterized protein 53.8 49 0.0017 23.0 7.0 49 152-209 36-84 (115)
106 2xcb_A PCRH, regulatory protei 53.6 63 0.0021 23.6 8.4 48 152-208 69-116 (142)
107 2fbn_A 70 kDa peptidylprolyl i 53.0 77 0.0026 24.4 12.2 29 10-38 40-68 (198)
108 1qqe_A Vesicular transport pro 52.9 37 0.0013 28.5 7.2 53 152-207 54-106 (292)
109 3bee_A Putative YFRE protein; 52.7 18 0.00061 25.9 4.4 29 10-38 45-73 (93)
110 3ma5_A Tetratricopeptide repea 52.5 54 0.0019 22.6 10.3 57 9-69 8-64 (100)
111 3gw4_A Uncharacterized protein 52.2 73 0.0025 24.0 15.8 56 152-210 124-179 (203)
112 1elw_A TPR1-domain of HOP; HOP 51.7 41 0.0014 22.6 6.1 45 152-205 55-99 (118)
113 2vyi_A SGTA protein; chaperone 51.1 51 0.0017 22.5 6.7 16 191-206 59-74 (131)
114 2vyi_A SGTA protein; chaperone 51.1 51 0.0017 22.5 6.7 47 152-207 63-109 (131)
115 2kat_A Uncharacterized protein 50.7 60 0.002 22.5 11.5 59 9-71 20-78 (115)
116 1elw_A TPR1-domain of HOP; HOP 50.5 54 0.0018 21.9 6.7 47 152-207 21-67 (118)
117 1lyp_A CAP18; lipopolysacchari 50.3 35 0.0012 19.8 4.4 27 86-112 4-30 (32)
118 2ho1_A Type 4 fimbrial biogene 49.5 93 0.0032 24.4 15.8 62 9-74 72-133 (252)
119 1a17_A Serine/threonine protei 49.2 50 0.0017 24.0 6.7 46 152-206 64-109 (166)
120 1xnf_A Lipoprotein NLPI; TPR, 49.0 97 0.0033 24.5 9.0 47 151-206 93-139 (275)
121 1ihg_A Cyclophilin 40; ppiase 49.0 18 0.00061 32.4 4.7 54 152-206 240-301 (370)
122 2dba_A Smooth muscle cell asso 48.0 55 0.0019 23.2 6.6 46 152-206 82-127 (148)
123 2hr2_A Hypothetical protein; a 47.7 31 0.0011 27.8 5.5 71 152-234 74-153 (159)
124 4ga2_A E3 SUMO-protein ligase 47.4 53 0.0018 24.6 6.7 46 152-206 48-93 (150)
125 1ya0_A SMG-7 transcript varian 47.1 69 0.0024 30.5 8.7 68 131-210 158-235 (497)
126 2h6f_A Protein farnesyltransfe 47.0 1.6E+02 0.0054 26.3 14.1 58 9-70 98-156 (382)
127 3sz7_A HSC70 cochaperone (SGT) 46.5 88 0.003 23.2 11.0 29 10-38 13-41 (164)
128 1na0_A Designed protein CTPR3; 46.3 65 0.0022 21.7 6.7 46 152-206 26-71 (125)
129 3gyz_A Chaperone protein IPGC; 46.1 47 0.0016 25.6 6.3 46 152-206 87-132 (151)
130 2fbn_A 70 kDa peptidylprolyl i 45.6 56 0.0019 25.3 6.8 49 152-206 55-116 (198)
131 2yhc_A BAMD, UPF0169 lipoprote 45.5 1.1E+02 0.0038 24.2 18.4 65 9-74 5-69 (225)
132 4ga2_A E3 SUMO-protein ligase 45.4 54 0.0018 24.6 6.4 28 11-38 34-61 (150)
133 4gfq_A Ribosome-recycling fact 45.2 50 0.0017 28.1 6.6 70 40-114 126-199 (209)
134 1zu2_A Mitochondrial import re 44.9 57 0.002 26.2 6.7 95 131-239 42-143 (158)
135 1a17_A Serine/threonine protei 44.9 62 0.0021 23.4 6.6 47 152-207 30-76 (166)
136 2ooe_A Cleavage stimulation fa 43.9 28 0.00097 32.0 5.3 53 151-212 62-114 (530)
137 1w3b_A UDP-N-acetylglucosamine 43.8 1.5E+02 0.0051 25.2 14.5 29 10-38 69-97 (388)
138 1na0_A Designed protein CTPR3; 43.3 73 0.0025 21.4 6.7 47 152-207 60-106 (125)
139 3caz_A BAR protein; thermo-aci 42.5 1.6E+02 0.0053 25.0 11.0 108 14-167 100-210 (294)
140 1hh8_A P67PHOX, NCF-2, neutrop 42.4 66 0.0022 24.7 6.7 46 152-206 54-99 (213)
141 3urz_A Uncharacterized protein 41.9 65 0.0022 25.4 6.7 31 8-38 4-34 (208)
142 2h6f_A Protein farnesyltransfe 41.9 1.9E+02 0.0065 25.8 13.5 45 11-58 203-247 (382)
143 1kt0_A FKBP51, 51 kDa FK506-bi 40.7 41 0.0014 30.8 5.9 53 152-206 285-345 (457)
144 3cv0_A Peroxisome targeting si 39.9 1.5E+02 0.005 24.0 17.8 30 9-38 56-85 (327)
145 1p5q_A FKBP52, FK506-binding p 39.8 23 0.00077 31.0 3.8 29 176-205 195-223 (336)
146 3as5_A MAMA; tetratricopeptide 39.0 89 0.003 22.7 6.7 47 152-207 93-139 (186)
147 1wao_1 Serine/threonine protei 38.5 60 0.002 30.0 6.7 26 180-206 77-102 (477)
148 1ge9_A Ribosome recycling fact 38.4 1.2E+02 0.004 25.2 7.7 71 40-114 104-174 (184)
149 1dd5_A Ribosome recycling fact 38.1 80 0.0027 26.2 6.7 69 40-113 102-174 (185)
150 3k9i_A BH0479 protein; putativ 37.3 1E+02 0.0036 21.5 8.2 59 9-71 28-86 (117)
151 2v5f_A Prolyl 4-hydroxylase su 36.6 1.1E+02 0.0037 21.5 7.3 53 152-206 22-74 (104)
152 1ise_A Ribosome recycling fact 36.4 84 0.0029 26.1 6.5 69 40-113 102-174 (185)
153 2kck_A TPR repeat; tetratricop 35.7 93 0.0032 20.4 7.6 27 12-38 10-36 (112)
154 2c2l_A CHIP, carboxy terminus 35.5 58 0.002 27.4 5.6 51 155-209 51-103 (281)
155 1is1_A Ribosome recycling fact 35.4 88 0.003 25.9 6.5 69 40-113 102-174 (185)
156 2ond_A Cleavage stimulation fa 34.7 60 0.002 27.3 5.6 46 152-206 186-231 (308)
157 2vgx_A Chaperone SYCD; alterna 34.5 1.1E+02 0.0038 22.8 6.7 46 152-206 38-83 (148)
158 1wqg_A Ribosome recycling fact 34.3 94 0.0032 25.8 6.5 69 40-113 102-174 (185)
159 2wb7_A PT26-6P; extra chromoso 34.0 1.4E+02 0.0047 28.8 8.2 53 138-192 435-488 (526)
160 1eh1_A Ribosome recycling fact 33.6 83 0.0028 26.1 6.1 74 40-114 103-176 (185)
161 1w3b_A UDP-N-acetylglucosamine 32.8 2.3E+02 0.0077 24.0 14.7 45 9-56 34-78 (388)
162 1hxi_A PEX5, peroxisome target 31.8 1.4E+02 0.0048 21.3 6.6 46 152-206 34-79 (121)
163 3gyz_A Chaperone protein IPGC; 31.7 1.7E+02 0.0058 22.3 9.4 57 9-69 37-93 (151)
164 2ond_A Cleavage stimulation fa 31.4 2.3E+02 0.0077 23.6 15.9 51 151-206 219-269 (308)
165 1hh8_A P67PHOX, NCF-2, neutrop 31.4 89 0.003 23.9 5.8 53 152-205 88-148 (213)
166 2xcb_A PCRH, regulatory protei 31.3 1.5E+02 0.0051 21.4 10.3 29 10-38 20-48 (142)
167 2fo7_A Synthetic consensus TPR 31.1 1.2E+02 0.0041 20.3 6.1 46 152-206 52-97 (136)
168 2r5s_A Uncharacterized protein 31.0 1.1E+02 0.0039 23.0 6.3 30 9-38 109-138 (176)
169 2kc7_A BFR218_protein; tetratr 30.5 1.2E+02 0.004 20.1 5.8 28 11-38 3-30 (99)
170 2e2e_A Formate-dependent nitri 29.8 1.1E+02 0.0037 22.8 5.9 47 152-206 61-109 (177)
171 3q49_B STIP1 homology and U bo 29.1 1.5E+02 0.005 20.7 9.3 50 152-210 60-109 (137)
172 2xev_A YBGF; tetratricopeptide 27.5 1.5E+02 0.0052 20.3 9.4 28 11-38 5-32 (129)
173 2l6j_A TPR repeat-containing p 27.5 81 0.0028 21.1 4.4 25 13-37 43-67 (111)
174 3onj_A T-snare VTI1; helix, HA 27.4 1.8E+02 0.0061 21.2 9.2 79 24-105 10-91 (97)
175 2wh5_A Acyl-COA-binding domain 27.2 98 0.0034 23.3 5.0 37 22-59 10-46 (106)
176 4a5x_A MITD1, MIT domain-conta 26.6 1.5E+02 0.0051 21.2 5.7 29 8-36 16-44 (86)
177 4abn_A Tetratricopeptide repea 26.1 3.6E+02 0.012 24.3 13.4 161 20-206 80-249 (474)
178 4h7y_A Dual specificity protei 25.8 74 0.0025 26.0 4.3 75 117-205 9-87 (161)
179 1hxi_A PEX5, peroxisome target 25.7 1.8E+02 0.0062 20.6 8.4 59 9-71 18-76 (121)
180 2g0u_A Type III secretion syst 25.3 29 0.001 25.8 1.6 60 122-188 5-68 (92)
181 3kfu_G Glutamyl-tRNA(Gln) amid 25.2 1E+02 0.0036 22.3 4.7 18 1-18 1-18 (92)
182 2if4_A ATFKBP42; FKBP-like, al 24.7 63 0.0021 28.1 4.0 49 152-206 196-258 (338)
183 3iyk_A VP5; icosahedral virus; 24.5 3.5E+02 0.012 26.0 9.2 196 22-232 121-337 (526)
184 3qou_A Protein YBBN; thioredox 24.2 2.1E+02 0.0073 23.7 7.3 30 9-38 220-249 (287)
185 3u64_A Protein TP_0956; tetrat 23.9 90 0.0031 27.9 4.9 47 152-206 221-268 (301)
186 1wao_1 Serine/threonine protei 23.6 1.2E+02 0.0041 27.8 6.0 10 22-31 20-29 (477)
187 2vq2_A PILW, putative fimbrial 23.5 2.3E+02 0.008 21.1 16.2 63 9-74 43-105 (225)
188 1xi4_A Clathrin heavy chain; a 23.3 7.8E+02 0.027 27.1 14.1 23 183-205 1285-1307(1630)
189 2crb_A Nuclear receptor bindin 23.2 2.3E+02 0.008 21.0 8.9 36 12-60 16-54 (97)
190 1na3_A Designed protein CTPR2; 22.8 1.5E+02 0.0052 18.8 6.6 60 9-72 10-69 (91)
191 2w9y_A CE-FAR-7, fatty acid/re 20.1 44 0.0015 26.7 1.8 74 98-174 61-136 (140)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=4.3e-96 Score=653.72 Aligned_cols=237 Identities=63% Similarity=0.981 Sum_probs=223.6
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchhHH
Q 024714 7 SREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVS 86 (263)
Q Consensus 7 ~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~ 86 (263)
+|++++|+||||+||||||||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~--~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~ 80 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELN--EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIE 80 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHH
Confidence 69999999999999999999999999999998 9999999999999999999999999999999999998788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCc--hhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHH
Q 024714 87 VIKEYRSKIENELSKICDGILSLLESHLIPSASSA--ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDI 164 (263)
Q Consensus 87 ~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~l 164 (263)
.+++||++|++||..+|++||++||++|||.++++ ++||||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 81 ~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~i 160 (248)
T 3uzd_A 81 MVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEI 160 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchHhHHHHHHHHHhhHhhhccCCCCC
Q 024714 165 ALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDD 244 (263)
Q Consensus 165 a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~IlqLLrDNl~~W~~e~~~~ 244 (263)
|+.+||||||||||||||||||||||+|+|++||.+|++|||+||+++|+|+|++|+|||+||||||||||+|+++.+++
T Consensus 161 A~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~~ 240 (248)
T 3uzd_A 161 SKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDD 240 (248)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC------
T ss_pred HHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred c
Q 024714 245 A 245 (263)
Q Consensus 245 ~ 245 (263)
+
T Consensus 241 ~ 241 (248)
T 3uzd_A 241 D 241 (248)
T ss_dssp -
T ss_pred c
Confidence 6
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=1.5e-95 Score=652.87 Aligned_cols=237 Identities=77% Similarity=1.138 Sum_probs=227.4
Q ss_pred CCCCCCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcC
Q 024714 1 MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG 80 (263)
Q Consensus 1 ~~~~~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~ 80 (263)
|++|+ +|++++|+|||++||||||||+++||+|++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|
T Consensus 25 ~~~m~-~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~--~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g 101 (261)
T 3ubw_A 25 MGSMD-DREDLVYQAKLAEQAERYDEMVESMKKVAGMD--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKG 101 (261)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhhhh-hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC--CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccc
Confidence 55664 69999999999999999999999999999998 9999999999999999999999999999999999998888
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHH
Q 024714 81 NEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKS 160 (263)
Q Consensus 81 ~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 160 (263)
++.+++.+++||++|++||..+|++||++||++|||.++++++||||+|||||||||+|||..|++|++++++|+++|++
T Consensus 102 ~~~~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~ 181 (261)
T 3ubw_A 102 GEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKA 181 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchHhHHHHHHHHHhhHhhhccC
Q 024714 161 AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD 240 (263)
Q Consensus 161 A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~IlqLLrDNl~~W~~e 240 (263)
|+++|+.+||||||||||||||||||||||+|+|++||.+|++|||+||+++|+|+|++|+|||+||||||||||+|+++
T Consensus 182 A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 182 ASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999974
No 3
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=1.7e-95 Score=646.15 Aligned_cols=231 Identities=61% Similarity=0.948 Sum_probs=227.3
Q ss_pred CcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchhH
Q 024714 6 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 85 (263)
Q Consensus 6 ~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~ 85 (263)
.+|++++|+||||+||||||||+++||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.++
T Consensus 6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~~~~--~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~ 83 (236)
T 3iqu_A 6 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKG--EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKG 83 (236)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHH
Confidence 379999999999999999999999999999998 999999999999999999999999999999999999888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHH
Q 024714 86 SVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIA 165 (263)
Q Consensus 86 ~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la 165 (263)
+.+++||++|++||..+|++||++||++|||.+++++++|||+|||||||||+|||..|++|++++++|+++|++|+++|
T Consensus 84 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA 163 (236)
T 3iqu_A 84 PEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDIS 163 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchHhHHHHHHHHHhhHhhhc
Q 024714 166 LAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWT 238 (263)
Q Consensus 166 ~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~IlqLLrDNl~~W~ 238 (263)
+.+||||||||||||||||||||||+|+|++||.+|++|||+||+++|+|+|++|+|||+||||||||||+||
T Consensus 164 ~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 164 KKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=2.9e-95 Score=653.23 Aligned_cols=252 Identities=87% Similarity=1.244 Sum_probs=224.8
Q ss_pred CCCCCCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcC
Q 024714 1 MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG 80 (263)
Q Consensus 1 ~~~~~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~ 80 (263)
|+.|+++|++++|+|||++|||||+||+++||++++.+.+++||.||||||||||||+||++|+|||+|++++|+++.+|
T Consensus 1 ~~~~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~ 80 (260)
T 1o9d_A 1 MAVAPTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG 80 (260)
T ss_dssp ----CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccC
Confidence 77888899999999999999999999999999999875336999999999999999999999999999999999998888
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHH
Q 024714 81 NEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKS 160 (263)
Q Consensus 81 ~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 160 (263)
++.+++.+++||++|++||..+|++||++||++|||.+++++++|||+|||||||||+|||..|++|++++++|+++|++
T Consensus 81 ~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~ 160 (260)
T 1o9d_A 81 NEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKA 160 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchHhHHHHHHHHHhhHhhhccC
Q 024714 161 AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD 240 (263)
Q Consensus 161 A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~IlqLLrDNl~~W~~e 240 (263)
|+++|+.+|||||||||||+||||||||||+|+|++||.||++|||+||+++|+|+|++|+|+|+||||||||||+|+++
T Consensus 161 A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~ 240 (260)
T 1o9d_A 161 AQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 240 (260)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhc
Confidence 99999989999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcchhhHHh
Q 024714 241 ITDDAGDEIKEA 252 (263)
Q Consensus 241 ~~~~~~~~~~~~ 252 (263)
.++++++.+.+.
T Consensus 241 ~~~~~~~~~~~~ 252 (260)
T 1o9d_A 241 MQDDGADEIKED 252 (260)
T ss_dssp ------------
T ss_pred cCcccccccccc
Confidence 887777665444
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=6.3e-93 Score=630.54 Aligned_cols=233 Identities=77% Similarity=1.144 Sum_probs=226.7
Q ss_pred CCCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCch
Q 024714 4 TDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED 83 (263)
Q Consensus 4 ~~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 83 (263)
|+ +|++++|+|||++||||||||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++++|++.
T Consensus 2 m~-~re~~v~~AklaeqaeRyddm~~~mk~v~~~~--~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~ 78 (234)
T 2br9_A 2 MD-DREDLVYQAKLAEQAERYDEMVESMKKVAGMD--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 78 (234)
T ss_dssp ---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred cc-hHHHHHHHHHHHHHHhCHHHHHHHHHHHhccc--CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH
Confidence 44 69999999999999999999999999999988 9999999999999999999999999999999999998788888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHH
Q 024714 84 HVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQD 163 (263)
Q Consensus 84 ~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 163 (263)
+++.+++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 79 ~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 79 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchHhHHHHHHHHHhhHhhhcc
Q 024714 164 IALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTS 239 (263)
Q Consensus 164 la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~IlqLLrDNl~~W~~ 239 (263)
+|+.+||||||+||||+||||||||||+|+|++||.+|++|||+|++++|+|+|++|+|+|+||||||||||+|++
T Consensus 159 iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 159 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 9998999999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=9.1e-92 Score=630.08 Aligned_cols=234 Identities=65% Similarity=1.039 Sum_probs=225.3
Q ss_pred CcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcC-CCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchh
Q 024714 6 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTV-DVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (263)
Q Consensus 6 ~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~-~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 84 (263)
++|++++|+|||++|||||+||+++||++++.+ ..++||.||||||||||||+||++|+|||+|++++|+++++|++.+
T Consensus 26 ~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~ 105 (260)
T 2npm_A 26 NARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDA 105 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHH
Confidence 469999999999999999999999999999863 1158999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHH
Q 024714 85 VSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDI 164 (263)
Q Consensus 85 ~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~l 164 (263)
++.|++||++|++||..+|++||++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 106 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 185 (260)
T 2npm_A 106 SKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVV 185 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchHhHHHHHHHHHhhHhhhccC
Q 024714 165 ALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSD 240 (263)
Q Consensus 165 a~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~IlqLLrDNl~~W~~e 240 (263)
| .+||||||+|||||||||||||||+|++++||.||++|||+||+++|+|+|++|+|+|+||||||||||+|+++
T Consensus 186 A-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 186 A-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp H-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred H-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 9 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=1.7e-88 Score=608.69 Aligned_cols=227 Identities=22% Similarity=0.442 Sum_probs=196.3
Q ss_pred cHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hhcCC-chh
Q 024714 7 SREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE-ESRGN-EDH 84 (263)
Q Consensus 7 ~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~-~~~~~-~~~ 84 (263)
+|++++|+|||++||||||||+++| ++.+ ++||.||||||||||||+||++|+|||+|++++|++ +.+|+ +.+
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~~--~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~ 102 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TESS--DFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEF 102 (268)
T ss_dssp ------------------CHHHHHH---TC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---HhcC--CcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHH
Confidence 6999999999999999999999999 7777 999999999999999999999999999999999999 67777 888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHH
Q 024714 85 VSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDI 164 (263)
Q Consensus 85 ~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~l 164 (263)
++.+++||++|++||..+|++||++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 103 ~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~ei 181 (268)
T 3efz_A 103 IQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQR 181 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHhcC--CCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhcccCCcchHhHHHHHHHHHhhHhhhcc
Q 024714 165 ALAEL--APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE---AISELDTLGEESYKDSTLIMQLLRDNLTLWTS 239 (263)
Q Consensus 165 a~~~L--~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~---ai~~ld~l~ee~~~ds~~IlqLLrDNl~~W~~ 239 (263)
|+++| |||||||||||||||||||||+|+|++||.+|++|||+ ||+++|+|+|++ |+||||||||||+|++
T Consensus 182 A~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWts 257 (268)
T 3efz_A 182 ERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWEQ 257 (268)
T ss_dssp HHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHTT
T ss_pred HHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhhc
Confidence 99899 99999999999999999999999999999999999999 999999999987 9999999999999999
Q ss_pred CCCC
Q 024714 240 DITD 243 (263)
Q Consensus 240 e~~~ 243 (263)
+.++
T Consensus 258 d~~~ 261 (268)
T 3efz_A 258 GCSG 261 (268)
T ss_dssp TCCT
T ss_pred cccc
Confidence 8664
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=1.4e-80 Score=546.65 Aligned_cols=215 Identities=20% Similarity=0.266 Sum_probs=198.7
Q ss_pred cHHhHH---HHHHHHHHhcCHHHHHHHHHHHhh----cCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhc
Q 024714 7 SREENV---YMAKLAEQAERYEEMVEFMEKVAK----TVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESR 79 (263)
Q Consensus 7 ~re~l~---~~Aklaeq~eRy~Dm~~~mk~~i~----~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~ 79 (263)
+|++++ |+|||++||||||||+++||++++ .+ ++||.||||||||||||+||++|+|||+|++++|++ +
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~--~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k 77 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFEN--SEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--L 77 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--C
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccC--CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--c
Confidence 588999 999999999999999999999999 78 899999999999999999999999999999999998 6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHH
Q 024714 80 GNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYK 159 (263)
Q Consensus 80 ~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 159 (263)
|++.+++.+++||++|++||..+|++|+++||++|||.+ |++|||+|||||||||+|||..|+ +++|+++|+
T Consensus 78 ~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~ 149 (227)
T 2o8p_A 78 NNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQ 149 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHH
Confidence 778889999999999999999999999999999999987 999999999999999999999997 899999999
Q ss_pred HHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHH---HHhhcccCCcchHhHHHHHHHHHhhHh
Q 024714 160 SAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA---ISELDTLGEESYKDSTLIMQLLRDNLT 235 (263)
Q Consensus 160 ~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~a---i~~ld~l~ee~~~ds~~IlqLLrDNl~ 235 (263)
+|+++|+.+||||||+||||+||||||||||+|+|++||.+|++||+.+ +..-++. +.++++|+|+|+|||||.
T Consensus 150 ~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m--~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 150 DAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENM--DRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHC----
T ss_pred HHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccc--hhHHHHHHHHHHHHHhcc
Confidence 9999999899999999999999999999999999999999999999976 3333322 358889999999999984
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.62 E-value=0.31 Score=39.77 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
+.|...|++|+.+++...++.+|.......+.+..++. .|+.++|+...++++..+-.
T Consensus 144 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 144 EEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 57999999999998888888899888888888877766 69999999999998876543
No 10
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=93.93 E-value=2.3 Score=35.14 Aligned_cols=187 Identities=15% Similarity=0.152 Sum_probs=99.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCC-----CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhh-hh--cC
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVD-----VEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE-ES--RG 80 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~-----~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~-~~--~~ 80 (263)
.-+..++.+....|+|++++.+++++++... ..+....-...+..+|-. .+....|...+....... .. ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 4566788899999999999999999886410 022222223333333322 233333433333211110 00 00
Q ss_pred CchhH----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHH
Q 024714 81 NEDHV----SVIKEYR-SKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTL 155 (263)
Q Consensus 81 ~~~~~----~~i~~yr-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~ 155 (263)
.+... .+..-|. ..=-++-...+...+.+.....-+. ....+..+-..|..|... ++ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 01000 0111010 0001223334444444443322111 122233333344444322 11 35799
Q ss_pred HHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 156 LAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 156 ~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
..|++|+.++....++.+|.......+.+..|+. .|+.++|+...++++..+-.
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 9999999999887888888888888888777766 69999999999999876543
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=93.59 E-value=2 Score=33.27 Aligned_cols=162 Identities=13% Similarity=0.114 Sum_probs=83.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchhHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVI 88 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 88 (263)
.-...++.+..+-|+|++++.+++++++.+ |. +.+=...+..+|-. .+....+...+........ ........+
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~--~~~~~~~~~ 79 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLKAD--PN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDT--TSAEAYYIL 79 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC--CCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCc--hhHHHHHHH
Confidence 345568889999999999999999999887 54 44555556666543 3444445444443322221 111101000
Q ss_pred -HHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHH
Q 024714 89 -KEYRS-KIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIAL 166 (263)
Q Consensus 89 -~~yr~-ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~ 166 (263)
.-+.. .--++-...+..++. +-|.. .. .+...|..|.-+ ++ -+.|.+.|++|+++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~-----~~~~~----~~--~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIA-----LNTVY----AD--AYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI-- 136 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-----HCTTC----HH--HHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHH-----hCccc----hH--HHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh--
Confidence 00000 000111122222221 12321 11 122334443221 11 35788899998864
Q ss_pred hcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 167 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 167 ~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
.|.+| ....|.+..|+ -+|+.++|+..-++|++
T Consensus 137 ---~p~~~---~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ---KPGFI---RAYQSIGLAYE-GKGLRDEAVKYFKKALE 169 (184)
T ss_dssp ---CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ---cchhh---hHHHHHHHHHH-HCCCHHHHHHHHHHHHh
Confidence 34454 34445555544 47999999987777654
No 12
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=92.96 E-value=1.5 Score=41.78 Aligned_cols=100 Identities=11% Similarity=0.072 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 024714 97 NELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIR 176 (263)
Q Consensus 97 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pir 176 (263)
+|-..+|...+.+-...|=|.. +. .+=-+.-.|..|+..-. -+.|...|++|+++-+..|+|.||.-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p~-~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--LY-VLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--HH-HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--HH-HHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 3456677777777766554432 11 11111223333322211 25689999999999999999999999
Q ss_pred hhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 177 LGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 177 LgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
+....|.++.|+. .|+.++|..+.++|+.--..
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999988776 69999999999998875443
No 13
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.33 E-value=3.9 Score=33.32 Aligned_cols=53 Identities=17% Similarity=0.096 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 153 STLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 153 ~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
.|...|++|+++....-.+. +-.+.-++..-...|...|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKY-KDELIEANEYIAYYYTINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 47889999999885432222 223333333333444557999999988777664
No 14
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=91.28 E-value=6.1 Score=33.43 Aligned_cols=57 Identities=7% Similarity=0.042 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
++|...|++|+++++ .++..+|....+..|.+..|+. +|+.++|+...++|++-+..
T Consensus 172 ~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 172 KKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 679999999999985 4666677777788899988887 69999999999999886643
No 15
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=91.03 E-value=0.45 Score=44.56 Aligned_cols=58 Identities=16% Similarity=0.078 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
+.|...|++|+.+-+..++|.||.......|.++-|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 57899999999999889999999999999999888777 79999999998888775544
No 16
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=90.90 E-value=1.6 Score=41.01 Aligned_cols=101 Identities=14% Similarity=0.034 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 024714 97 NELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIR 176 (263)
Q Consensus 97 ~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pir 176 (263)
+|...+|...+.+-.+.|=|.. +. .+=-+.--|.-|+.. | --+.|...|++|+++-+..++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~H--p~-~a~~~~nLa~~y~~~-----g-----~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSN--VY-MLHMMYQAMGVCLYM-----Q-----DWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--HH-HHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhc--hH-HHHHHHHHHHHHHhh-----c-----CHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 3455667777777766554432 11 111111223332211 1 025799999999999999999999999
Q ss_pred hhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 024714 177 LGLALNFSVFYYEILNSPDRACNLAKQAFDEAISE 211 (263)
Q Consensus 177 LgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ 211 (263)
.....|.++-|+. .|+.++|..+-++|+.--...
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHH
Confidence 9988898887776 799999999988887755443
No 17
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=90.87 E-value=6.2 Score=32.75 Aligned_cols=45 Identities=11% Similarity=0.101 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 205 (263)
+.|...|++|+.+. |.+| ....+.+..++ -+|+.++|+...++++
T Consensus 253 ~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 253 AEALDYHRQALVLI-----PQNA---STYSAIGYIHS-LMGNFENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHH-HHTCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhC-----ccch---HHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 56888999988653 3343 23344444444 4799999988766654
No 18
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=90.57 E-value=1.7 Score=35.17 Aligned_cols=56 Identities=14% Similarity=0.080 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~a 208 (263)
+.|...|++|+.+++...+|.+|.......|.+..++. +|+.++|+...+++++..
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 57899999999999888888899888888888887765 799999999999988864
No 19
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=89.91 E-value=3.4 Score=36.22 Aligned_cols=73 Identities=18% Similarity=0.201 Sum_probs=48.1
Q ss_pred hHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhh-HHHHHHHHhCChHHHHHHH
Q 024714 123 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALN-FSVFYYEILNSPDRACNLA 201 (263)
Q Consensus 123 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN-~SVF~yEi~~~~~~A~~ia 201 (263)
...+|+-.+|.+|...-. -+.|...|++|+.++.. .+ +|...+.+++ .+..|+ .+|+.++|+...
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~ 166 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-VK--DRIEKAEFFFKMSESYY-YMKQTYFSMDYA 166 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC--CHHHHHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-CC--CHHHHHHHHHHHHHHHH-HcCCHHHHHHHH
Confidence 345666667777653322 35789999999988753 32 4444444444 455555 489999999998
Q ss_pred HHHHHHHH
Q 024714 202 KQAFDEAI 209 (263)
Q Consensus 202 k~afd~ai 209 (263)
++|++-+-
T Consensus 167 ~~al~~~~ 174 (383)
T 3ulq_A 167 RQAYEIYK 174 (383)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877543
No 20
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=89.63 E-value=11 Score=33.85 Aligned_cols=49 Identities=12% Similarity=0.131 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~a 208 (263)
.+.|...|++|+.+ .|.+| ....+.+..|+ -.|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKL-QMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HhccHHHHHHHHHHHHHhC
Confidence 45678888888764 34554 33455555544 4799999998888777644
No 21
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=89.47 E-value=9.9 Score=33.00 Aligned_cols=189 Identities=15% Similarity=0.044 Sum_probs=96.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHH----HHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchh
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVE----ERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~e----ERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 84 (263)
..+..++....+.|+|++++.++.++++.. +. +.. =...+..+|- ..+....+...+....+.....++...
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~-~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAG--TE-DLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CS-CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhc--cc-ChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 456678888899999999999999999876 44 222 2233333333 234444454444332211111111110
Q ss_pred H-----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhh-------cChhhHHHHH
Q 024714 85 V-----SVIKEY-RSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEF-------KTGAERKEAA 151 (263)
Q Consensus 85 ~-----~~i~~y-r~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~~~~~~~~~~ 151 (263)
. .+..-| ...--++-...+..++.+.... .+....+..+...|..|...-.. ...++-....
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~ 199 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEAL 199 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHH
Confidence 0 000000 0011123334445555544332 12223333344455555444330 0011223346
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
+.|...|++|+.++... +.+|.......+.+.. |.-.|+.++|+...++++.-.-
T Consensus 200 ~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 200 TRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNT-YYLLGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHH-HHHcCChHHHHHHHHHHHHHHH
Confidence 78899999999988643 2234444444444444 4457999999998888876554
No 22
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=89.45 E-value=9.1 Score=32.52 Aligned_cols=59 Identities=14% Similarity=0.193 Sum_probs=37.6
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS 71 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 71 (263)
.-+..++.+....|+|++++.+++++++.. |. +.+-...+..+|-. .+....+...+..
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLELK--PD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345677888888888888888888888775 43 34445555555543 3444455555543
No 23
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=89.39 E-value=0.67 Score=43.61 Aligned_cols=58 Identities=7% Similarity=-0.019 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
+.|...|++|+++.+.-|.|.||..+...-|.+.-|.. +|+.++|..+.++|+.--..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Confidence 56788999999999889999999999988888777665 79999999999999775544
No 24
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=88.71 E-value=8 Score=30.89 Aligned_cols=60 Identities=13% Similarity=-0.002 Sum_probs=42.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS 71 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 71 (263)
+.+..++.+..+.|+|++++.++.++++.. |.-+..-...+..+|-. .+....|...+..
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLT--NNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT--TTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcc--CCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 577888999999999999999999999887 53444444445555443 4555556665543
No 25
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=88.45 E-value=13 Score=33.02 Aligned_cols=49 Identities=14% Similarity=0.109 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 205 (263)
++|..+|++|+.+ .|.++..-.+.+++..|++...|+.++|+..-++|+
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 5789999999853 344455556677888887777899999987665554
No 26
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=88.45 E-value=0.82 Score=43.68 Aligned_cols=58 Identities=16% Similarity=0.077 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
+.|...|++|+++.+.-|.|.||-.+...-|.+..|.. .|+.++|..+.++|++--..
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Confidence 45677899999999889999999999999998887776 69999999999998875433
No 27
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=87.84 E-value=13 Score=32.37 Aligned_cols=176 Identities=11% Similarity=0.032 Sum_probs=88.2
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCH-----HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCC-chhHH
Q 024714 13 YMAKLAEQAERYEEMVEFMEKVAKTVDVEELTV-----EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN-EDHVS 86 (263)
Q Consensus 13 ~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~-----eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~-~~~~~ 86 (263)
+++.+....|+|++++.++++.+... ..... +=...+..+|-. .+..-.|...+.....--+..++ .....
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 184 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKL--IFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLL 184 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTG--GGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHH--hhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 37888888999999999999988753 22222 122333444332 23333333333221111110111 10000
Q ss_pred HH-----HHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHH
Q 024714 87 VI-----KEYR-SKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKS 160 (263)
Q Consensus 87 ~i-----~~yr-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 160 (263)
.+ .-|. ..=-++-.......+.+.... .+.......+.-.|..|..+-. -+.|...|++
T Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~ 249 (383)
T 3ulq_A 185 QCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFKR 249 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHH
Confidence 00 0000 000122233444444444332 2222333333335555543211 3579999999
Q ss_pred HHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 161 AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 161 A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
|+.+++..-. .|.......|.+..|+. +|+.++|+...++|+.-+-
T Consensus 250 al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 250 AIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 9999865322 14344445555555554 7999999999888877653
No 28
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=86.16 E-value=15 Score=31.34 Aligned_cols=194 Identities=13% Similarity=0.008 Sum_probs=97.9
Q ss_pred CCcHHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCH---HHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCC
Q 024714 5 DSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTV---EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN 81 (263)
Q Consensus 5 ~~~re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~---eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~ 81 (263)
...-..+...+......|+|++++.++.+++... +.-.. .=...+..+|-. .+....+...+.....-....++
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~ 82 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQVG--TEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGD 82 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC--cccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccc
Confidence 3334566788999999999999999999999876 44211 122334444432 23344444443321111111111
Q ss_pred chhH-----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhh-------hc---Chh
Q 024714 82 EDHV-----SVIKEY-RSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAE-------FK---TGA 145 (263)
Q Consensus 82 ~~~~-----~~i~~y-r~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~---~~~ 145 (263)
.... .+..-| ...=-++-...+...+.+.... .+....+..+-..|..|...-. .. ..+
T Consensus 83 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 157 (406)
T 3sf4_A 83 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPE 157 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhh
Confidence 1100 000001 0011123344455555544432 1222223333344444443333 00 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 146 ERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 146 ~~~~~~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
+-....+.|...|++|+.++.. + +.+|.......|.+..++ -.|+.++|+...++|+.-+-
T Consensus 158 ~a~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 158 EVRDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HHTBHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Confidence 3334567889999999988864 3 234444444445555444 47999999998888876543
No 29
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=85.95 E-value=21 Score=32.83 Aligned_cols=173 Identities=17% Similarity=0.113 Sum_probs=91.1
Q ss_pred HhHHHHHHHHHHhcCH-HHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchhHHH
Q 024714 9 EENVYMAKLAEQAERY-EEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSV 87 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy-~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 87 (263)
.-+..++++....|+| ++++.++++.++.+ |. ..+=...|..+|-.. +....|...+......... ......+
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~--p~-~~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~--~~~~~~l 176 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLE--PE-LVEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKN--KVSLQNL 176 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCC--HHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhC--CC-CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC--HHHHHHH
Confidence 4556777888888888 88888888888775 43 355566666665432 4444454444432222111 0111111
Q ss_pred HHHHHH----------HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHH
Q 024714 88 IKEYRS----------KIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLA 157 (263)
Q Consensus 88 i~~yr~----------ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~a 157 (263)
..-|.. .=-++-...++..+.+ -|.. ..+ +-..|..|.... +..+. ...-.+.|..+
T Consensus 177 g~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~~--~~~lg~~~~~~~-~~~~~-~~g~~~~A~~~ 243 (474)
T 4abn_A 177 SMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GRS--WYILGNAYLSLY-FNTGQ-NPKISQQALSA 243 (474)
T ss_dssp HHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHHH-HHTTC-CHHHHHHHHHH
T ss_pred HHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHHH-Hhhcc-ccchHHHHHHH
Confidence 111111 1112333444444433 2321 222 223455444320 11111 11235689999
Q ss_pred HHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 158 YKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 158 Y~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 244 ~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 244 YAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 9999876 23222555666777777665 7999999887777764
No 30
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=85.93 E-value=18 Score=32.07 Aligned_cols=55 Identities=15% Similarity=0.070 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHhcC--CCCC----cchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAEL--APTH----PIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L--~pt~----pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
.+.|...|++++..-...+ .|.+ |.......+.+..++. .|+.++|+...++++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4678888888887443334 4444 5555555566655554 6999999998887765
No 31
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=85.56 E-value=5.5 Score=34.94 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=49.6
Q ss_pred hhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHH
Q 024714 122 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLA 201 (263)
Q Consensus 122 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~ia 201 (263)
....+|+-.+|.+|...-. -+.|...|++|+.++.. ++ .+|..-....|.+.+|+. +|+.++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3445566677877654322 25789999999998753 33 234444444555655554 79999999999
Q ss_pred HHHHHHHH
Q 024714 202 KQAFDEAI 209 (263)
Q Consensus 202 k~afd~ai 209 (263)
++|++-.-
T Consensus 165 ~~al~~~~ 172 (378)
T 3q15_A 165 LQALDIYQ 172 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877554
No 32
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=85.42 E-value=15 Score=30.60 Aligned_cols=46 Identities=13% Similarity=0.068 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+| ....+.+..++ ..|+.++|+...++|+.
T Consensus 289 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 289 VEAIRICSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 5678888888764 34443 34455555544 47999998887777654
No 33
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=85.28 E-value=2.4 Score=31.68 Aligned_cols=47 Identities=17% Similarity=0.309 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.-
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 5799999999865 45554 345677777666 79999999988888764
No 34
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=84.59 E-value=0.94 Score=42.37 Aligned_cols=58 Identities=10% Similarity=-0.032 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
+.|...|++|+++.+.-|+|.||..+...-|-+.-|.. .|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 45667777777776678999999999998888777665 79999999999998765443
No 35
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=83.96 E-value=26 Score=32.10 Aligned_cols=47 Identities=9% Similarity=0.116 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
.+.|...|++++++ .|.+| ....+.+. .|...|+.++|....+++++
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~-~~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIAL-VYLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHH-HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHH-HHHHhCCHHHHHHHHHHHHh
Confidence 35788888888765 25555 22333333 34458999999988777665
No 36
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=83.77 E-value=16 Score=29.48 Aligned_cols=58 Identities=12% Similarity=0.125 Sum_probs=32.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 70 (263)
+-+..++.+..+.|+|++++..+.+++..+ |. +.+=...+..+|-. .+....+...+.
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKEN--PQ-DPEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTS--SS-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 345566777777777777777777777664 33 34444445554432 233344444443
No 37
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=82.35 E-value=16 Score=28.68 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=33.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS 71 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 71 (263)
.-+..+|.+..+.|+|++++.++++++... +. +..-...+..+|-. .+....+...+..
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELD--SS-AATAYYGAGNVYVV-KEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--Cc-chHHHHHHHHHHHH-hccHHHHHHHHHH
Confidence 345566777777788888888888777665 33 23333444444432 2334444444443
No 38
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=82.25 E-value=19 Score=29.36 Aligned_cols=55 Identities=16% Similarity=-0.035 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
+.|...|++|+.++... .+|...+.+++.-...|...|+.++|+...++++.-+-
T Consensus 200 ~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 57888999999888642 23444454555444555567999999998888876543
No 39
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=82.18 E-value=25 Score=35.00 Aligned_cols=44 Identities=16% Similarity=0.223 Sum_probs=33.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAY 55 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvay 55 (263)
+-+..++.+..+.|+|++++.+.++.++.+ |+. .+=.+-|..+|
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~--P~~-~~a~~nLg~~l 53 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVF--PEF-AAAHSNLASVL 53 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--SCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCC-HHHHHHHHHHH
Confidence 456778999999999999999999999987 654 33333344443
No 40
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.93 E-value=26 Score=30.64 Aligned_cols=179 Identities=8% Similarity=-0.014 Sum_probs=91.1
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHH-----HHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchhH
Q 024714 11 NVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEE-----RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 85 (263)
Q Consensus 11 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eE-----RnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~ 85 (263)
+..++++....|+|++++++++++.... +.++... ++++...+. ..+..-.+..............++....
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 134 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYM--MQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLK 134 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHH--HTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHH
Confidence 6788999999999999999999988765 5565432 222222211 1122222222222111111111111111
Q ss_pred HHHHHHHHHHH------HHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHH
Q 024714 86 SVIKEYRSKIE------NELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYK 159 (263)
Q Consensus 86 ~~i~~yr~ki~------~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 159 (263)
..+....-++- .+...+.++++... +...+....+-++-..|..|.-+ ++ .++|...|+
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~A~~~~~ 199 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREF-----KKLDDKPSLVDVHLLESKVYHKL-----RN-----LAKSKASLT 199 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-----TTSSCSTHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHH-----HhcccchhHHHHHHHHHHHHHHh-----Cc-----HHHHHHHHH
Confidence 11111111111 12222222322222 12222234444444455444321 11 357899999
Q ss_pred HHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 160 SAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 160 ~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
+|..++.. .+ ..|.-.|...+...-+|...++..+|+....++|...-
T Consensus 200 ~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 200 AARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp HHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 99998853 43 23344466666666677778999999998888887644
No 41
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=81.67 E-value=20 Score=29.22 Aligned_cols=190 Identities=12% Similarity=-0.008 Sum_probs=99.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHH----HHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchh
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEE----RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eE----RnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 84 (263)
..+...+......|+|++++.+++++++.. +. +.+. ...+..+|- ..+....+...+..........++...
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~ 81 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVG--TE-DLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLG 81 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CS-CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhC--cc-cHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHH
Confidence 456778899999999999999999999875 44 2221 223333332 223334444444322111111111110
Q ss_pred -H----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhc----------ChhhHH
Q 024714 85 -V----SVIKEY-RSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFK----------TGAERK 148 (263)
Q Consensus 85 -~----~~i~~y-r~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~~ 148 (263)
. .+..-| ...--++-...+...+.+.... .+....+..+...|..|...-... ..++-.
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~ 156 (338)
T 3ro2_A 82 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVR 156 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHH
Confidence 0 000001 0111123334445555554432 223344445555676666554411 012223
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 149 EAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 149 ~~~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
...+.|...|++|+.++... + .+|.......+.+. .|.-.|+.++|+...++++.-+-.
T Consensus 157 ~~~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~l~~-~~~~~~~~~~A~~~~~~a~~~~~~ 215 (338)
T 3ro2_A 157 NALQAAVDLYEENLSLVTAL-G-DRAAQGRAFGNLGN-THYLLGNFRDAVIAHEQRLLIAKE 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-T-CHHHHHHHHHHHHH-HHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-C-CHHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHh
Confidence 44678899999999887642 2 23333334444444 444579999999999888776543
No 42
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=81.65 E-value=12 Score=26.82 Aligned_cols=54 Identities=17% Similarity=0.111 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~a 208 (263)
+.|...|++|+.++.. .+ .+|.......+.+.. |.-.|+.++|+...++++.-+
T Consensus 106 ~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 106 EKAIDYHLKHLAIAQE-LK-DRIGEGRACWSLGNA-YTALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHH-HHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cc-chHhHHHHHHHHHHH-HHHccCHHHHHHHHHHHHHHH
Confidence 5688999999999854 22 223333344444544 445799999999888877654
No 43
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=81.45 E-value=20 Score=29.20 Aligned_cols=67 Identities=15% Similarity=0.083 Sum_probs=46.4
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhh
Q 024714 8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQK 75 (263)
Q Consensus 8 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk 75 (263)
-+.+..+|...-+.|+|++++..+++++...+..++..+=...+..+|-. .+....|...+..+...
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQI 81 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHH
Confidence 46788889999999999999999999998862122335555666666543 45566666666654443
No 44
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=80.86 E-value=28 Score=30.40 Aligned_cols=46 Identities=13% Similarity=0.055 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+| ....+.+..+ ...|+.++|+...++++.
T Consensus 312 ~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~-~~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 312 VEAIRVCSEVLQM-----EPDNV---NALKDRAEAY-LIEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHH-HHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 5678888888754 34444 3334444444 457999999988888764
No 45
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=80.11 E-value=27 Score=29.72 Aligned_cols=178 Identities=12% Similarity=0.035 Sum_probs=85.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCC-----HHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchh
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELT-----VEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt-----~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 84 (263)
-+..++.+....|+|++++.++++.+... .... ..-...+..+|. ..+....+...+..........++...
T Consensus 49 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~ 125 (406)
T 3sf4_A 49 IYSQLGNAYFYLHDYAKALEYHHHDLTLA--RTIGDQLGEAKASGNLGNTLK-VLGNFDEAIVCCQRHLDISRELNDKVG 125 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHH--HhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccccc
Confidence 35578888889999999999999877552 2221 111222333332 234444455444322211111111110
Q ss_pred H-------HHHHHHHHH-------------------HHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchh
Q 024714 85 V-------SVIKEYRSK-------------------IENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYL 138 (263)
Q Consensus 85 ~-------~~i~~yr~k-------------------i~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYl 138 (263)
. ..+-..... .-++-...+...+.+.... .+....+..+...|..|...
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~ 200 (406)
T 3sf4_A 126 EARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL-----GDRAAQGRAFGNLGNTHYLL 200 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc-----cCcHHHHHHHHHHHHHHHHc
Confidence 0 111111111 0233344555555555432 11222233333345554433
Q ss_pred hhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024714 139 AEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (263)
Q Consensus 139 aE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~a 208 (263)
-. .+.|...|++|+.++.. . + +|..++.+++.-...|...|+.++|+...++++.-+
T Consensus 201 g~----------~~~A~~~~~~al~~~~~-~-~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 201 GN----------FRDAVIAHEQRLLIAKE-F-G-DKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp TB----------HHHHHHHHHHHHHHHHH-T-T-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cC----------HHHHHHHHHHHHHHHHh-c-C-CcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 21 24678888888888754 2 1 233333333333333444788888888877776544
No 46
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=79.93 E-value=30 Score=30.19 Aligned_cols=167 Identities=13% Similarity=0.100 Sum_probs=83.1
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCch-hHHHHHH
Q 024714 12 VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED-HVSVIKE 90 (263)
Q Consensus 12 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~~ 90 (263)
..+|.+..+.|+|++++.++.++++.. | -+..-...+..+|-. .+....+...+........ .+.. ...+..-
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~~~--~-~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~ 220 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILEVC--V-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKN--DNTEAFYKISTL 220 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHC--SCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC--C-CChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHH
Confidence 445777888999999999999999875 3 345555566665543 3444555555544332221 1111 1111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHh--------hccccchhhhhcChhhHHHHHHHHHHHHHHH
Q 024714 91 YRS-KIENELSKICDGILSLLESHLIPSASSAESKVFYLKM--------KGDYHRYLAEFKTGAERKEAAESTLLAYKSA 161 (263)
Q Consensus 91 yr~-ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 161 (263)
|.. .=-++-......++. +-|. .......+..+ .|+.|. +..-.+.|...|++|
T Consensus 221 ~~~~g~~~~A~~~~~~~~~-----~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~----------~~g~~~~A~~~~~~~ 283 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLK-----LDQD--HKRCFAHYKQVKKLNKLIESAEELI----------RDGRYTDATSKYESV 283 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHH-----HCTT--CHHHHHHHHHHHHHHHHHHHHHHHH----------HHTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH-----hCCC--hHHHHHHHHHHHHHHHHHHHHHHHH----------HcCCHHHHHHHHHHH
Confidence 111 001112222222221 1232 11111111010 022111 011135688888888
Q ss_pred HHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 162 QDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 162 ~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+. +.|.+|....-++..-+..|.-.|+.++|+...++++.
T Consensus 284 l~-----~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 284 MK-----TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HH-----HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred Hh-----cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 75 34667765444444434445568999999999888764
No 47
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=79.03 E-value=3 Score=31.88 Aligned_cols=54 Identities=17% Similarity=0.214 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHhcC---CCC-------CcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAEL---APT-------HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L---~pt-------~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+..... .|+ +|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 578999999998864321 233 56777888888887776 6999999998888865
No 48
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=78.44 E-value=30 Score=29.38 Aligned_cols=44 Identities=11% Similarity=0.027 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHh
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYK 56 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayK 56 (263)
.++.++....+.|+|++++.++++++... |. +.+-...+..+|-
T Consensus 67 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~lg~~~~ 110 (365)
T 4eqf_A 67 GAFEEGLKRLKEGDLPVTILFMEAAILQD--PG-DAEAWQFLGITQA 110 (365)
T ss_dssp THHHHHHHHHHHTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhC--cC-CHHHHHHHHHHHH
Confidence 46667777777777777777777777664 33 3444444554443
No 49
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=78.32 E-value=36 Score=30.11 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
.+.|...|++|+.+ .|.+| ....+.+..+. -.|+.++|+...+++++-
T Consensus 431 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 431 FIEATNLLEKASKL-----DPRSE---QAKIGLAQMKL-QQEDIDEAITLFEESADL 478 (514)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 35788888888764 34444 33344444444 479999999887777653
No 50
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=77.82 E-value=7.4 Score=28.09 Aligned_cols=55 Identities=16% Similarity=-0.005 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
+.|...|++|++++... .+|..++.+++.-...|-..|+.++|+...++++.-+-
T Consensus 26 ~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 26 RDAVIAHEQRLLIAKEF---GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 56888999999888642 34455555555444444457999999998888877553
No 51
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=77.07 E-value=13 Score=31.35 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhh-hhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGL-ALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgL-aLN~SVF~yEi~~~~~~A~~iak~afd~a 208 (263)
+.|...|++|+.+. .+..++..... ..|.+++|+. +|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~---~~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQ---LTGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTC---CCCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh---cccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 56889999999854 22334434343 4444555554 799999999988888643
No 52
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=76.96 E-value=34 Score=29.10 Aligned_cols=30 Identities=7% Similarity=0.116 Sum_probs=26.3
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
.-+..++.+..+.|+|++++.+++++++..
T Consensus 100 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 129 (365)
T 4eqf_A 100 EAWQFLGITQAENENEQAAIVALQRCLELQ 129 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 456678899999999999999999999876
No 53
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=76.49 E-value=45 Score=30.37 Aligned_cols=55 Identities=11% Similarity=0.019 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
.+.|.+.|++|+++... . +.+|-....+++.-...|...|+.++|+...++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46789999999988643 2 3456553334444344455589999999988888754
No 54
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=76.15 E-value=7.6 Score=28.84 Aligned_cols=46 Identities=17% Similarity=0.136 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|..+|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5688899998864 34444 445566666665 6999999887777664
No 55
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=75.72 E-value=28 Score=27.62 Aligned_cols=164 Identities=9% Similarity=-0.027 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCch-hHHHH
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED-HVSVI 88 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i 88 (263)
-+..+|.+....|+|++++.++++++... +. +.+-...+..+|-. .+....+...+....+... .+.. ...+.
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~--~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~la 112 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEID--PS-SADAHAALAVVFQT-EMEPKLADEEYRKALASDS--RNARVLNNYG 112 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcC--CC-hHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHCc--CcHHHHHHHH
Confidence 45677888889999999999999998875 43 34445555555543 3445555555544322211 1111 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhc
Q 024714 89 KEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAE 168 (263)
Q Consensus 89 ~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~ 168 (263)
.-|.. ..--.+.+..++..+- ....+.. ...+...|..|... ++ .+.|...|++|+.+
T Consensus 113 ~~~~~------~g~~~~A~~~~~~~~~-~~~~~~~-~~~~~~la~~~~~~-----g~-----~~~A~~~~~~~~~~---- 170 (252)
T 2ho1_A 113 GFLYE------QKRYEEAYQRLLEASQ-DTLYPER-SRVFENLGLVSLQM-----KK-----PAQAKEYFEKSLRL---- 170 (252)
T ss_dssp HHHHH------TTCHHHHHHHHHHHTT-CTTCTTH-HHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH----
T ss_pred HHHHH------HhHHHHHHHHHHHHHh-CccCccc-HHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHhc----
Confidence 11111 0111234444444332 1111222 22223344444321 11 35677788887754
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 169 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 169 L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
.|.+| ....+.+..++ -.|+.++|....++++.
T Consensus 171 -~~~~~---~~~~~la~~~~-~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 171 -NRNQP---SVALEMADLLY-KEREYVPARQYYDLFAQ 203 (252)
T ss_dssp -CSCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred -CcccH---HHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 23333 23344444444 46888888887777654
No 56
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=75.62 E-value=38 Score=29.12 Aligned_cols=179 Identities=11% Similarity=-0.004 Sum_probs=86.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCC-----HHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCch-
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELT-----VEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED- 83 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt-----~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~- 83 (263)
-+..++.+....|+|++++.++++.++.. ..+. ..=...+..+|- ..+....+...+.....-....++..
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~ 164 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLA--KSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLS 164 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHH
Confidence 35578888889999999999999887652 1111 111223333332 23334444444432211111011110
Q ss_pred ----hHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhh
Q 024714 84 ----HVSVIKEYRSK-I-----------------ENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEF 141 (263)
Q Consensus 84 ----~~~~i~~yr~k-i-----------------~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~ 141 (263)
...+..-|... - -++-...+...+.+.... .+....+..+...|..|...-.
T Consensus 165 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~- 238 (411)
T 4a1s_A 165 EGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC-
Confidence 00111111111 0 233444555555554432 1222333344445555443221
Q ss_pred cChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 142 KTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 142 ~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
.+.|...|++|+.++... .++...+.+++.-...|--.|+.++|+...++++..+-
T Consensus 239 ---------~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 ---------FQAAIEHHQERLRIAREF---GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred ---------hHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 246788888888877541 13333333443333444457888888887777766544
No 57
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=74.55 E-value=35 Score=28.19 Aligned_cols=167 Identities=13% Similarity=0.121 Sum_probs=86.4
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCch-hHHHHHH
Q 024714 12 VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED-HVSVIKE 90 (263)
Q Consensus 12 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~i~~ 90 (263)
..+|.+....|+|++++.++++++... | -+.+-...+..+|-. .+....+...+........ .+.. ......-
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~--~-~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~ 197 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVC--V-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKS--DNTEAFYKISTL 197 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCS--CCHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhC--C-CchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHH
Confidence 345788999999999999999999875 4 345555556665544 3555666666654433221 1111 1111111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhh--------ccccchhhhhcChhhHHHHHHHHHHHHHHH
Q 024714 91 YRS-KIENELSKICDGILSLLESHLIPSASSAESKVFYLKMK--------GDYHRYLAEFKTGAERKEAAESTLLAYKSA 161 (263)
Q Consensus 91 yr~-ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 161 (263)
|.. .=-++-...+..++. +-|. .+....+|.++. |..+. ..+ -.+.|...|+++
T Consensus 198 ~~~~~~~~~A~~~~~~a~~-----~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~-----~~~~A~~~~~~~ 260 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLK-----LDQD--HKRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESV 260 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHH-----HCTT--CHHHHHHHHHHHHHHHHHHHHHHHH-----HTT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHh-----hCcc--chHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHH
Confidence 110 001122222222221 1232 222223332221 22211 111 135678888888
Q ss_pred HHHHHhcCCCCCcchhh-hhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 162 QDIALAELAPTHPIRLG-LALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 162 ~~la~~~L~pt~pirLg-LaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.. .|.+|.... +..+.+..++. .|+.++|+...++++..
T Consensus 261 ~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 261 MKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred Hhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 764 345654433 34455555554 79999999988887763
No 58
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=74.40 E-value=35 Score=28.01 Aligned_cols=56 Identities=14% Similarity=-0.077 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCC-cchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTH-PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~-pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
.+.|...|++|+.+....-.+.+ |....+..+.+..++ ..|+.++|+...++++..
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCR-KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 35789999999988754333222 333334455555554 479999999988887753
No 59
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=73.76 E-value=39 Score=28.38 Aligned_cols=58 Identities=9% Similarity=-0.005 Sum_probs=40.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 70 (263)
..+..++.+..+.|+|++++.+++++++.. |. +..-...+..+|.. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQD--PK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 457889999999999999999999999875 43 45555556665543 244444444443
No 60
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=73.17 E-value=7.8 Score=32.73 Aligned_cols=73 Identities=7% Similarity=0.015 Sum_probs=48.5
Q ss_pred HHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHH
Q 024714 124 KVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQ 203 (263)
Q Consensus 124 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~ 203 (263)
.+..+...|..|...-. -+.|...|++|+++++. .+....+...+..|.+..|+. +|+.++|+...++
T Consensus 154 ~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~k 221 (293)
T 2qfc_A 154 NLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHH
Confidence 34344455666643321 25799999999999863 443222223566677776665 7999999999999
Q ss_pred HHHHH
Q 024714 204 AFDEA 208 (263)
Q Consensus 204 afd~a 208 (263)
|++-+
T Consensus 222 al~~~ 226 (293)
T 2qfc_A 222 AIEIS 226 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98766
No 61
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=72.99 E-value=46 Score=28.82 Aligned_cols=54 Identities=7% Similarity=0.143 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~a 208 (263)
.+.|...|++|++++... .+|.......|.+..++ -+|+.++|+...++|+.-+
T Consensus 238 ~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLC-KAGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHH
Confidence 357999999999998754 34444444455555555 4799999998877776643
No 62
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=72.81 E-value=42 Score=28.22 Aligned_cols=51 Identities=6% Similarity=-0.067 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchh-hhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirL-gLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|..+|++|+++.... . +|... ....|.+.++.. +|+.++|+...+++..
T Consensus 135 ~~A~~~~~~Al~~~~~~-~--~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 135 AKAIDCYELAGEWYAQD-Q--SVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHHHT-T--CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-C--ChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 57999999999987531 1 23232 234566666665 7999999987666554
No 63
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=71.95 E-value=54 Score=29.21 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHh--cCCCCCcc---hhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 153 STLLAYKSAQDIALA--ELAPTHPI---RLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 153 ~a~~aY~~A~~la~~--~L~pt~pi---rLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
.+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344455555554432 35566653 2455555555566668999999988888765
No 64
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=71.16 E-value=12 Score=26.12 Aligned_cols=53 Identities=8% Similarity=-0.007 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+.. ..++.++.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 578899999998874 3444555445566666666665 7999999887766665
No 65
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=70.61 E-value=12 Score=27.60 Aligned_cols=52 Identities=8% Similarity=-0.002 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 205 (263)
+.|...|++|+++.. ..++.++.+-....|.+.. |.-+|+.++|+..-++|+
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~-~~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNA-FQKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHH
Confidence 578999999999875 3444444433344445554 445799999998655544
No 66
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=70.58 E-value=42 Score=27.39 Aligned_cols=44 Identities=16% Similarity=0.071 Sum_probs=25.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAY 55 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvay 55 (263)
+.++.+|....+.|+|++++.++++++... |. +..-...+..+|
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~-~~~~~~~l~~~~ 65 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAA--PE-REEAWRSLGLTQ 65 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHH
Confidence 345666677777777777777777766654 33 334444444443
No 67
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=70.50 E-value=39 Score=26.95 Aligned_cols=57 Identities=11% Similarity=-0.025 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 70 (263)
-+..++.+....|+|++++.++++++..+ |. +.+-...+..+|-. .+....+.+.+.
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~--~~-~~~~~~~la~~~~~-~~~~~~A~~~~~ 101 (275)
T 1xnf_A 45 LLYERGVLYDSLGLRALARNDFSQALAIR--PD-MPEVFNYLGIYLTQ-AGNFDAAYEAFD 101 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CC-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHcC--CC-cHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 34456666777777777777777777665 33 34444455555433 334444444443
No 68
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=70.37 E-value=34 Score=26.19 Aligned_cols=167 Identities=8% Similarity=-0.025 Sum_probs=83.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCch-hHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNED-HVSV 87 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~-~~~~ 87 (263)
.-+..++.+....|+|++++.++++++... |. +.+-...+..+|-. .+....+...+....+... .+.. ....
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~--~~~~~~~~l 82 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSD--PK-NELAWLVRAEIYQY-LKVNDKAQESFRQALSIKP--DSAEINNNY 82 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhC--cc-chHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCC--CChHHHHHH
Confidence 345677888889999999999999999876 43 34445555555532 3445555555544332211 1111 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHh
Q 024714 88 IKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALA 167 (263)
Q Consensus 88 i~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~ 167 (263)
..-|... ..--.+.+..++..+- ....+. ....+...|..|... + -.+.|...|++++..
T Consensus 83 ~~~~~~~-----~~~~~~A~~~~~~~~~-~~~~~~-~~~~~~~l~~~~~~~-----~-----~~~~A~~~~~~~~~~--- 142 (225)
T 2vq2_A 83 GWFLCGR-----LNRPAESMAYFDKALA-DPTYPT-PYIANLNKGICSAKQ-----G-----QFGLAEAYLKRSLAA--- 142 (225)
T ss_dssp HHHHHTT-----TCCHHHHHHHHHHHHT-STTCSC-HHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHH---
T ss_pred HHHHHHh-----cCcHHHHHHHHHHHHc-CcCCcc-hHHHHHHHHHHHHHc-----C-----CHHHHHHHHHHHHHh---
Confidence 1111110 0001122223332221 111111 122223345444322 1 135678888888764
Q ss_pred cCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 168 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 168 ~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
.|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 143 --~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 143 --QPQFP---PAFKELARTKM-LAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp --STTCH---HHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred --CCCCc---hHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Confidence 33443 23334444444 479999999888877653
No 69
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=70.28 E-value=14 Score=28.32 Aligned_cols=74 Identities=9% Similarity=0.008 Sum_probs=47.8
Q ss_pred hHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHH
Q 024714 123 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK 202 (263)
Q Consensus 123 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak 202 (263)
..+..+-..|..|...-. .+.|...|++|+.++. ..+ .+|...+.+++.-...|--.|++++|+...+
T Consensus 64 ~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 131 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALHFGDLAGARQEYE 131 (203)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 334444455655544322 2568999999999986 344 2454555555444444555899999999998
Q ss_pred HHHHHH
Q 024714 203 QAFDEA 208 (263)
Q Consensus 203 ~afd~a 208 (263)
+|+.-+
T Consensus 132 ~al~~~ 137 (203)
T 3gw4_A 132 KSLVYA 137 (203)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888754
No 70
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=69.02 E-value=15 Score=25.10 Aligned_cols=45 Identities=16% Similarity=0.200 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 205 (263)
+.|...|++|+.+ .|.+| ....|.+.-++. +|+.++|+...++++
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5688899999865 34454 344566665554 799999988766665
No 71
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=68.86 E-value=40 Score=26.42 Aligned_cols=29 Identities=10% Similarity=0.026 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
-+..++.+....|+|++++.++.++++..
T Consensus 40 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 68 (258)
T 3uq3_A 40 YLNNRAAAEYEKGEYETAISTLNDAVEQG 68 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 34556666777777777777777776654
No 72
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=68.74 E-value=11 Score=33.62 Aligned_cols=53 Identities=15% Similarity=0.154 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAE-LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~-L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 205 (263)
+.|.++|++|+++.+.. ....||-.+....|.+.-|+. +|+.++|...-+++.
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHH
Confidence 57999999999998653 344677777777788777766 799999877655554
No 73
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=67.76 E-value=19 Score=23.53 Aligned_cols=46 Identities=20% Similarity=0.368 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 5688899998864 34443 344556655554 7999999887777665
No 74
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=67.40 E-value=46 Score=26.59 Aligned_cols=49 Identities=6% Similarity=-0.140 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCC---hHHHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNS---PDRACNLAKQAFDEA 208 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~---~~~A~~iak~afd~a 208 (263)
.+.|...|++|+++ .|.+| ...++.+..++ .+++ .++|+...+++++..
T Consensus 158 ~~~A~~~~~~a~~~-----~p~~~---~~~~~~~~~~~-~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 158 YVKADSSFVKVLEL-----KPNIY---IGYLWRARANA-AQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHH-HHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHH-HcCcchhhHHHHHHHHHHHHHH
Confidence 35677788887754 34443 22223333333 3466 666777666666554
No 75
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=66.73 E-value=18 Score=31.19 Aligned_cols=55 Identities=11% Similarity=0.044 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....+++..
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 46888899999888654444456555555666666665 58888888888777654
No 76
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=66.73 E-value=55 Score=27.25 Aligned_cols=188 Identities=15% Similarity=0.063 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHH-----hhhhhhhHHHHHHHHH-HhhhhhhcCCch
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAY-----KNVIGARRASWRIISS-IEQKEESRGNED 83 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvay-----Kn~i~~~R~s~R~l~~-ieqk~~~~~~~~ 83 (263)
.+...+...-..|+|++++.++++.++.. +. ..+....+..-| -...+..-.|...+.. ++.... ..+..
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~ 152 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKE--EY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT-GIDVY 152 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTC--CC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCC-SSCTT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccc--cC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc-CCchH
Confidence 44566677777899999999999888765 44 333322222111 1112233445554432 211111 11111
Q ss_pred h-H----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHH
Q 024714 84 H-V----SVIKEYR-SKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLA 157 (263)
Q Consensus 84 ~-~----~~i~~yr-~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~a 157 (263)
. . .+..-|. ..=-++-....+..+.+.+. .|. +....+..+-..|..|..+-+ -+.|...
T Consensus 153 ~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~~ 218 (293)
T 2qfc_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLDSR----------YEESLYQ 218 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHHhh----------HHHHHHH
Confidence 0 1 1111111 11112344555566655543 232 111121222234544432211 3579999
Q ss_pred HHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchH
Q 024714 158 YKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYK 221 (263)
Q Consensus 158 Y~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ 221 (263)
|++|++++.. ..++..++.+++.--..|.-+|+.++|+. ..|+.|+.-.+.+....++
T Consensus 219 ~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~---~~~~~Al~~~~~~~~~~~~ 276 (293)
T 2qfc_A 219 VNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIE---DAYKKASFFFDILEMHAYK 276 (293)
T ss_dssp HHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHH---HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHH---HHHHHHHHHHHHhCcHhhH
Confidence 9999999853 23444566555555555666899999942 3344455444555555553
No 77
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=66.72 E-value=18 Score=25.78 Aligned_cols=47 Identities=15% Similarity=0.265 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++|+.+ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5788899988864 3444 3455666666665 79999999988887764
No 78
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=65.67 E-value=34 Score=26.70 Aligned_cols=49 Identities=24% Similarity=0.162 Sum_probs=37.0
Q ss_pred cCHHHHHHHHHHHh-hcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 024714 22 ERYEEMVEFMEKVA-KTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (263)
Q Consensus 22 eRy~Dm~~~mk~~i-~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~ 70 (263)
.|.|..++++|.-+ ....+++||.|-|.=|.--.|...-.-|-|.|-+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57788888887554 22233999999999998888887777777777663
No 79
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=65.07 E-value=22 Score=23.82 Aligned_cols=46 Identities=13% Similarity=0.163 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+ .....+.+..++. .|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 4688888888764 2333 3345666666665 6999999887776654
No 80
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=64.99 E-value=63 Score=27.28 Aligned_cols=24 Identities=17% Similarity=0.090 Sum_probs=16.5
Q ss_pred HHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 15 AKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 15 Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
+.+....|+|++++.+..+.++..
T Consensus 43 ~~~~~~~g~~~~A~~~~~~al~~~ 66 (307)
T 2ifu_A 43 AVAFKNAKQLEQAKDAYLQEAEAH 66 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHH
Confidence 455666677788777777776554
No 81
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=64.67 E-value=48 Score=25.80 Aligned_cols=60 Identities=8% Similarity=-0.012 Sum_probs=25.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSI 72 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~i 72 (263)
..+..+|...-+.|+|++++.++++++... |. +.+-...+..+|- ..+....+.+.+...
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~--~~-~~~~~~~la~~~~-~~~~~~~A~~~~~~~ 83 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIEEN--KE-DAIPYINFANLLS-SVNELERALAFYDKA 83 (243)
T ss_dssp ------------------CCTTHHHHHTTC--TT-CHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhC--cc-cHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 345677888889999999999999998865 33 3454555555543 245555666665543
No 82
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=63.94 E-value=54 Score=26.12 Aligned_cols=45 Identities=16% Similarity=0.101 Sum_probs=33.7
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHh
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYK 56 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayK 56 (263)
+-+..++.+..+.|+|++++..+++++..+ |. +.+-...+..+|.
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~--P~-~~~a~~~lg~~~~ 84 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVART--PR-YLGGYMVLSEAYV 84 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-cHHHHHHHHHHHH
Confidence 445678899999999999999999999887 54 3444455555543
No 83
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=63.85 E-value=30 Score=24.31 Aligned_cols=49 Identities=16% Similarity=0.131 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+...++++.
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888753 46676655555666666654 7999999887666554
No 84
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.60 E-value=17 Score=26.12 Aligned_cols=49 Identities=27% Similarity=0.211 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+. +.|.+|....+..+.+..++. .|+.++|+...++++.
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 346667766653 345555555556666665554 5777777777766654
No 85
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=63.59 E-value=51 Score=25.76 Aligned_cols=30 Identities=7% Similarity=0.121 Sum_probs=25.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
.-+..++.+....|+|++++.++++++...
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 109 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEH 109 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcC
Confidence 345678888999999999999999999876
No 86
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=63.24 E-value=35 Score=25.62 Aligned_cols=47 Identities=9% Similarity=0.064 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++++..
T Consensus 62 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 4566667766654 33343 344455555444 68888887766666543
No 87
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=63.05 E-value=59 Score=26.28 Aligned_cols=64 Identities=19% Similarity=0.043 Sum_probs=46.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhh---------hhhhHHHHHHHHHHhhh
Q 024714 12 VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNV---------IGARRASWRIISSIEQK 75 (263)
Q Consensus 12 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~---------i~~~R~s~R~l~~ieqk 75 (263)
..+|.+..+.|+|++++..+++++...+......+-...+..+|.+. .+....|...+..+...
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~ 224 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI 224 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH
Confidence 67899999999999999999999988722334566677777777654 25556666666554433
No 88
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=62.81 E-value=69 Score=27.01 Aligned_cols=51 Identities=6% Similarity=-0.057 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 205 (263)
+.|...|++|+.+.... +. +| ..+.++.-.+..|-.+|+.++|+...++++
T Consensus 172 ~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 172 DEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 57899999999988542 22 22 333233333445555799999988766654
No 89
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=62.31 E-value=28 Score=23.46 Aligned_cols=47 Identities=19% Similarity=0.137 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+|.. ...+.+..|+. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 4678888888753 3445421 45566666655 6999999887776664
No 90
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=60.36 E-value=1.4e+02 Score=29.58 Aligned_cols=136 Identities=14% Similarity=0.206 Sum_probs=78.1
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchhHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVI 88 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 88 (263)
+-+..++.+..+.|+|++++.+.++.++.+ |+.. .+|-|+-... .. .|+ ....+
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~--P~~~--------~a~~nLg~~l-----------~~---~g~--~~~A~ 97 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRIS--PTFA--------DAYSNMGNTL-----------KE---MQD--VQGAL 97 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCH--------HHHHHHHHHH-----------HH---TTC--HHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCH--------HHHHHHHHHH-----------HH---cCC--HHHHH
Confidence 345678899999999999999999999987 6542 2333322211 11 111 22444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhc
Q 024714 89 KEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAE 168 (263)
Q Consensus 89 ~~yr~ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~ 168 (263)
..|++-|+ +-|.. ..++ ...|..|+-+ | -.+.|..+|++|+++
T Consensus 98 ~~~~kAl~-----------------l~P~~----~~a~--~~Lg~~~~~~-----g-----~~~eAi~~~~~Al~l---- 140 (723)
T 4gyw_A 98 QCYTRAIQ-----------------INPAF----ADAH--SNLASIHKDS-----G-----NIPEAIASYRTALKL---- 140 (723)
T ss_dssp HHHHHHHH-----------------HCTTC----HHHH--HHHHHHHHHT-----T-----CHHHHHHHHHHHHHH----
T ss_pred HHHHHHHH-----------------hCCCC----HHHH--HHHHHHHHHc-----C-----CHHHHHHHHHHHHHh----
Confidence 44444331 12321 1122 2234333221 1 135799999999865
Q ss_pred CCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024714 169 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISEL 212 (263)
Q Consensus 169 L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~l 212 (263)
.|.+|- ...|.+. .|..+|+.++|++..+++..-.-..+
T Consensus 141 -~P~~~~---a~~~L~~-~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 -KPDFPD---AYCNLAH-CLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp -CSCCHH---HHHHHHH-HHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred -CCCChH---HHhhhhh-HHHhcccHHHHHHHHHHHHHhChhHH
Confidence 455542 3344443 34457999999998888877665544
No 91
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=58.95 E-value=42 Score=23.24 Aligned_cols=72 Identities=17% Similarity=0.103 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchHhHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLR 231 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~IlqLLr 231 (263)
+.|...|++|+++ .|.+|. ...+.+..|+ -+|+.++|+...++|+.-+-..- ...-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~~------~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREEG------TQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHS------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcCC------chhHHHHHHHHHH
Confidence 5688899988865 344443 4445555544 47999999998888876654321 1333445555665
Q ss_pred hhHhhhc
Q 024714 232 DNLTLWT 238 (263)
Q Consensus 232 DNl~~W~ 238 (263)
..=..|.
T Consensus 89 ~~~~~~~ 95 (100)
T 3ma5_A 89 KAEGLEH 95 (100)
T ss_dssp HHHTTC-
T ss_pred Hcccccc
Confidence 5444443
No 92
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=58.94 E-value=30 Score=24.55 Aligned_cols=46 Identities=20% Similarity=0.088 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 3566666666643 23333 333444444443 5677776666665554
No 93
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=58.54 E-value=33 Score=27.64 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhh-----hhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLG-----LALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLg-----LaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
-+.|..+|++|+.+.-. .|+..++.+. +..|-+.-+.. +|+.++|+..+.+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 35799999999998743 3333333333 55666655554 7999999988777765
No 94
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=58.45 E-value=56 Score=24.54 Aligned_cols=46 Identities=11% Similarity=0.032 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 4678888888764 34443 445556665555 6999998887666654
No 95
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=58.06 E-value=32 Score=25.95 Aligned_cols=47 Identities=9% Similarity=-0.005 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|..+|++|+.+ .|.+|. ..+|.++.|+. +|+.++|+...++++.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5689999999864 455653 34566666555 79999998766665543
No 96
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=57.96 E-value=30 Score=25.38 Aligned_cols=46 Identities=7% Similarity=-0.004 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5688899999864 44444 344555555554 7999998876666554
No 97
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=57.01 E-value=35 Score=23.70 Aligned_cols=47 Identities=13% Similarity=0.088 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~-~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALE-AMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHH-HHhhHHHHHHHHHHHHHh
Confidence 5678888888864 33343 34455555554 479999998887776653
No 98
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=56.11 E-value=60 Score=24.15 Aligned_cols=69 Identities=7% Similarity=-0.120 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchHhHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLR 231 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~ds~~IlqLLr 231 (263)
+.|...|++|+.+ .|.+| ...++.+..|+. +|+.++|+...++|+.- +.+.-......+..++
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHH
Confidence 4678888888765 45554 334445554444 79999998876666543 2222223444555555
Q ss_pred hhHhhh
Q 024714 232 DNLTLW 237 (263)
Q Consensus 232 DNl~~W 237 (263)
.-+..+
T Consensus 143 ~~~~~~ 148 (162)
T 3rkv_A 143 ERRAEK 148 (162)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554444
No 99
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=55.76 E-value=36 Score=24.15 Aligned_cols=15 Identities=20% Similarity=0.472 Sum_probs=7.4
Q ss_pred hCChHHHHHHHHHHH
Q 024714 191 LNSPDRACNLAKQAF 205 (263)
Q Consensus 191 ~~~~~~A~~iak~af 205 (263)
+|+.++|+...++++
T Consensus 56 ~~~~~~A~~~~~~al 70 (137)
T 3q49_B 56 MQQPEQALADCRRAL 70 (137)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHH
Confidence 455555555444443
No 100
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=55.59 E-value=39 Score=23.21 Aligned_cols=49 Identities=20% Similarity=0.392 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
+.|...|++|+.+ .|.+| .+..+.+..++. .|+.++|+....+++...-
T Consensus 21 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 21 DTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 5688888888765 23343 344555665554 7999999999888877653
No 101
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=54.97 E-value=59 Score=23.71 Aligned_cols=58 Identities=21% Similarity=0.176 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS 71 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 71 (263)
-+..++.+..+.|+|++++..+++++... +. +..-...+..+|- ..+....+...+..
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~-~~~~~~~~~~~~~-~~~~~~~A~~~~~~ 67 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDAD--AF-DVDVALHLGIAYV-KTGAVDRGTELLER 67 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCTT--SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhC--cc-ChHHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 44567888888999999999999888765 43 3333344444442 23444445555443
No 102
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=54.48 E-value=39 Score=23.88 Aligned_cols=48 Identities=8% Similarity=0.000 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~a 208 (263)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 5688899999865 34443 344555555544 799999998888877654
No 103
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=54.30 E-value=35 Score=25.85 Aligned_cols=46 Identities=20% Similarity=0.310 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|..+|++|+++ .|.|| ....+.+..|+. +|+.++|+.....+..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5688889988864 34554 233344444443 6888888887776644
No 104
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=53.94 E-value=85 Score=25.25 Aligned_cols=28 Identities=7% Similarity=0.188 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKT 37 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~ 37 (263)
-+..++.+....|+|++++.++++.+..
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~ 98 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAI 98 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3557888888899999999999998865
No 105
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=53.77 E-value=49 Score=23.04 Aligned_cols=49 Identities=14% Similarity=0.024 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
+.|...|++|+.+ .|.++ ....+.+..|.. .|+.++|+...++++...-
T Consensus 36 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcc
Confidence 5688899998864 34443 234555555554 7999999988887776543
No 106
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=53.58 E-value=63 Score=23.61 Aligned_cols=48 Identities=19% Similarity=0.096 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~a 208 (263)
+.|..+|++|+.+ .|.+|. ..+|.+..|+. +|+.++|+...++++...
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5689999999864 456653 33555555554 799999998777776544
No 107
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=52.96 E-value=77 Score=24.44 Aligned_cols=29 Identities=3% Similarity=-0.127 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
.+..++......|+|++++.++++++...
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 68 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFF 68 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45577888888899999999999998764
No 108
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=52.93 E-value=37 Score=28.52 Aligned_cols=53 Identities=9% Similarity=-0.045 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|..+|++|+++... +. +|...+.+++-.-..|.-+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5789999999998753 32 55555666666555666689999999888877654
No 109
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.69 E-value=18 Score=25.94 Aligned_cols=29 Identities=10% Similarity=0.022 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
-+++++.++.+.|+|++++.+..++.+..
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 45566677777777777777777766655
No 110
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=52.52 E-value=54 Score=22.61 Aligned_cols=57 Identities=9% Similarity=0.083 Sum_probs=39.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRII 69 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l 69 (263)
.-+..++.+..+.|+|++++.+++++++.+ |... .=...+..+|.. .+..-.|...+
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~-~a~~~lg~~~~~-~g~~~~A~~~~ 64 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETD--PDYV-GTYYHLGKLYER-LDRTDDAIDTY 64 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCT-HHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCcH-HHHHHHHHHHHH-cCCHHHHHHHH
Confidence 346678999999999999999999999987 6543 345556666643 23344444444
No 111
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=52.18 E-value=73 Score=23.99 Aligned_cols=56 Identities=11% Similarity=-0.121 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|+...++|++-+-.
T Consensus 124 ~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 124 AGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 5789999999998753 2 245555555555555556689999999887777765543
No 112
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=51.72 E-value=41 Score=22.56 Aligned_cols=45 Identities=11% Similarity=-0.019 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 205 (263)
+.|...|++|+.+ .|.+| ....+.+..++ -+|+.++|+...++++
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALE-FLNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HHhhHHHHHHHHHHHH
Confidence 5678888888764 34443 34455555544 4799999988766654
No 113
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=51.13 E-value=51 Score=22.48 Aligned_cols=16 Identities=19% Similarity=0.073 Sum_probs=9.2
Q ss_pred hCChHHHHHHHHHHHH
Q 024714 191 LNSPDRACNLAKQAFD 206 (263)
Q Consensus 191 ~~~~~~A~~iak~afd 206 (263)
.|+.++|+....+++.
T Consensus 59 ~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 59 LGNYAGAVQDCERAIC 74 (131)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHh
Confidence 4666666665555544
No 114
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=51.08 E-value=51 Score=22.47 Aligned_cols=47 Identities=17% Similarity=0.082 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++|+.+ .|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALS-SLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 5688888888764 34443 23345555444 479999998887776653
No 115
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=50.73 E-value=60 Score=22.54 Aligned_cols=59 Identities=10% Similarity=0.100 Sum_probs=41.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS 71 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 71 (263)
.-+..++.+....|+|++++.++++++..+ |.. .+-...+..+|.. .+....+...+..
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~-~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFD--PTY-SVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHC--CCc-HHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 456678899999999999999999999886 543 4455566666654 3555555555543
No 116
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=50.46 E-value=54 Score=21.92 Aligned_cols=47 Identities=21% Similarity=0.210 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888754 34443 234455555554 79999999988887764
No 117
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=50.26 E-value=35 Score=19.78 Aligned_cols=27 Identities=33% Similarity=0.562 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024714 86 SVIKEYRSKIENELSKICDGILSLLES 112 (263)
Q Consensus 86 ~~i~~yr~ki~~EL~~~C~eii~lId~ 112 (263)
+.++.||.+|.+.|..+.+.|-.++.+
T Consensus 4 krlrkfrnkikeklkkigqkiqgllpk 30 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 457889999999999999988877653
No 118
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=49.48 E-value=93 Score=24.41 Aligned_cols=62 Identities=8% Similarity=-0.046 Sum_probs=42.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQ 74 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieq 74 (263)
.-+..+|.+..+.|+|++++.++++++... +. +..-...+..+|-. .+....+.+.+.....
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASD--SR-NARVLNNYGGFLYE-QKRYEEAYQRLLEASQ 133 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHC--cC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHHh
Confidence 445678899999999999999999999876 44 34445555555543 4555666666655433
No 119
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=49.24 E-value=50 Score=23.96 Aligned_cols=46 Identities=9% Similarity=-0.155 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 5678888888765 23443 344555555444 7999999888777765
No 120
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=49.02 E-value=97 Score=24.48 Aligned_cols=47 Identities=17% Similarity=0.122 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 35677788887764 34443 233344444444 7999999888887775
No 121
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=49.02 E-value=18 Score=32.44 Aligned_cols=54 Identities=17% Similarity=0.208 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHhc--------CCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAE--------LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~--------L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 56888888888865431 011466777788888887775 7899999888887765
No 122
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.00 E-value=55 Score=23.15 Aligned_cols=46 Identities=11% Similarity=-0.063 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5678888888765 34443 334555555554 7999999887776654
No 123
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=47.70 E-value=31 Score=27.80 Aligned_cols=71 Identities=17% Similarity=0.092 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHH--hcCCCCCc-------chhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhcccCCcchHh
Q 024714 152 ESTLLAYKSAQDIAL--AELAPTHP-------IRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKD 222 (263)
Q Consensus 152 ~~a~~aY~~A~~la~--~~L~pt~p-------irLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~ld~l~ee~~~d 222 (263)
+.|..+|.+|+++-. -.+.|.++ .++|.+|. -+|+.++|+.--++|+.-.= -+-..+++
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~-------~lgr~eEAl~~y~kAlel~p-----~d~~~~~~ 141 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD-------GLGRGAEAMPEFKKVVEMIE-----ERKGETPG 141 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH-------HTTCHHHHHHHHHHHHHHHH-----HCCSCCTT
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH-------HCCCHHHHHHHHHHHHhcCC-----CcHHHHHH
Confidence 468888999988732 24566554 34444444 38999999875555544322 12334555
Q ss_pred HHHHHHHHHhhH
Q 024714 223 STLIMQLLRDNL 234 (263)
Q Consensus 223 s~~IlqLLrDNl 234 (263)
...+.+.+.+.+
T Consensus 142 ~~~~~~~~~~~~ 153 (159)
T 2hr2_A 142 KERMMEVAIDRI 153 (159)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566666555544
No 124
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=47.35 E-value=53 Score=24.61 Aligned_cols=46 Identities=9% Similarity=0.147 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+++ .|.||- ...+.+..|+ -+|+.++|+..-++|+.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 5688888888764 455542 3334444444 47999988877666654
No 125
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=47.06 E-value=69 Score=30.49 Aligned_cols=68 Identities=19% Similarity=0.259 Sum_probs=39.9
Q ss_pred hccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhH------HHHHHH----HhCChHHHHHH
Q 024714 131 KGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNF------SVFYYE----ILNSPDRACNL 200 (263)
Q Consensus 131 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~------SVF~yE----i~~~~~~A~~i 200 (263)
-||..||...+ ..|...|.+|..+.=. ....-..||+.-.+ +||||- +..-...|..=
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~--~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~n 225 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPS--NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTN 225 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTT--BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCC--CCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHH
Confidence 79999999764 5789999999875411 11112567755544 677774 11223344444
Q ss_pred HHHHHHHHHH
Q 024714 201 AKQAFDEAIS 210 (263)
Q Consensus 201 ak~afd~ai~ 210 (263)
....|+.+.+
T Consensus 226 L~~~f~~~~~ 235 (497)
T 1ya0_A 226 LQKALSKALE 235 (497)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 4455555543
No 126
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=46.98 E-value=1.6e+02 Score=26.34 Aligned_cols=58 Identities=12% Similarity=0.144 Sum_probs=39.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhh-hHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGA-RRASWRIIS 70 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~-~R~s~R~l~ 70 (263)
+-+.+++.+....|+|++++....+++..+ |. +.+=.+.+..+|... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~--P~-~~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELN--AA-NYTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhC--cc-CHHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 445678888888999999999999999887 54 344445555555443 32 445555544
No 127
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=46.46 E-value=88 Score=23.23 Aligned_cols=29 Identities=7% Similarity=0.116 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
.+..++.+..+.|+|++++.++.+++..+
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~ 41 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIA 41 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34455666666666666666666666554
No 128
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=46.29 E-value=65 Score=21.66 Aligned_cols=46 Identities=20% Similarity=0.368 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4566677776643 22332 223344444443 5777777776666654
No 129
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=46.07 E-value=47 Score=25.61 Aligned_cols=46 Identities=11% Similarity=0.060 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|..+|++|+.+ .|.+|. ...|.++.|.. +|+.++|+..-++|+.
T Consensus 87 ~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 87 QQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5789999999864 455653 34566665554 7999999876666554
No 130
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=45.65 E-value=56 Score=25.25 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc-------------chhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHP-------------IRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~p-------------irLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+....+++.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 46778888887643 3343 112455666666654 6999999888887765
No 131
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=45.51 E-value=1.1e+02 Score=24.18 Aligned_cols=65 Identities=12% Similarity=0.045 Sum_probs=42.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQ 74 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieq 74 (263)
+.+..+|...-+.|+|++++..+++++...+..++..+-...+..+|-. .+....|...+..+.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 3566778888899999999999999998762123334545555555532 4555666666655443
No 132
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=45.42 E-value=54 Score=24.56 Aligned_cols=28 Identities=21% Similarity=0.345 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 11 NVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 11 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
...+|++..+.|+|+.++.+++++++.+
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~ 61 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQ 61 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999887
No 133
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=45.18 E-value=50 Score=28.08 Aligned_cols=70 Identities=17% Similarity=0.169 Sum_probs=43.5
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024714 40 VEELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (263)
Q Consensus 40 ~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~L 114 (263)
.|+||.|-|.=|....|...-..|.+.|-+..--. +.+..+. +-++-.++.+++|..+.+..+.-||..+
T Consensus 126 iP~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~~-----isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 126 FPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGE-----ITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-----SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999888888888887742111 1000010 1123444566666666666666666543
No 134
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=44.94 E-value=57 Score=26.19 Aligned_cols=95 Identities=18% Similarity=0.212 Sum_probs=54.0
Q ss_pred hccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCc---chhhhhhhHHHHH----HHHhCChHHHHHHHHH
Q 024714 131 KGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHP---IRLGLALNFSVFY----YEILNSPDRACNLAKQ 203 (263)
Q Consensus 131 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~p---irLgLaLN~SVF~----yEi~~~~~~A~~iak~ 203 (263)
.|.-+.=+..+..+.+..+..+.|..+|++|+.+ .|.++ ..||.++.---|+ -+-.|+.++|+.
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~---- 112 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ---- 112 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----
Confidence 3445554666777777777889999999999865 45554 3455555322221 011235555555
Q ss_pred HHHHHHHhhcccCCcchHhHHHHHHHHHhhHhhhcc
Q 024714 204 AFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTS 239 (263)
Q Consensus 204 afd~ai~~ld~l~ee~~~ds~~IlqLLrDNl~~W~~ 239 (263)
+|+.|+.. + .+ +.+...-+++..++-.+|..
T Consensus 113 ~~~kAl~l-~---P~-~~~y~~al~~~~ka~el~~~ 143 (158)
T 1zu2_A 113 FFQQAVDE-Q---PD-NTHYLKSLEMTAKAPQLHAE 143 (158)
T ss_dssp HHHHHHHH-C---TT-CHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHh-C---CC-CHHHHHHHHHHHhCHhccCc
Confidence 55566542 1 11 23344456666777777653
No 135
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=44.93 E-value=62 Score=23.39 Aligned_cols=47 Identities=21% Similarity=0.181 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++|+.+ .|.+ ..+..+.+..++. .|+.++|+...++++..
T Consensus 30 ~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 30 ENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLR-TECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5688888888864 2333 3444555555554 79999999988887653
No 136
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=43.88 E-value=28 Score=31.97 Aligned_cols=53 Identities=11% Similarity=0.041 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISEL 212 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~~l 212 (263)
.+.|...|++|+.. +| ...+-+.|+-|..+..|+.+.|.+.+..+|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 35788888888742 23 3457888888999999999999999999999998753
No 137
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=43.79 E-value=1.5e+02 Score=25.16 Aligned_cols=29 Identities=7% Similarity=0.157 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
-+..++.+..+.|+|++++.++++++...
T Consensus 69 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 97 (388)
T 1w3b_A 69 AYSNLGNVYKERGQLQEAIEHYRHALRLK 97 (388)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHcC
Confidence 45566777777777777777777777665
No 138
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=43.25 E-value=73 Score=21.38 Aligned_cols=47 Identities=19% Similarity=0.340 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++++.+ .|.+| ....+.+..++. .|+.++|....++++..
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 4677888888754 33443 334455655554 79999998877766643
No 139
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=42.49 E-value=1.6e+02 Score=24.98 Aligned_cols=108 Identities=22% Similarity=0.299 Sum_probs=62.2
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchhHHHHHHHHH
Q 024714 14 MAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRS 93 (263)
Q Consensus 14 ~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~ 93 (263)
.|+|.+....|-.|++-+|.-... ..|..|.=.-||=.+.. ++.+. .. ...|++-..
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~n-------f~e~RLiYDHYKlKvdE----------LEK~~---Kd---SeKI~RNQs 156 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYKE-------TDKYRERYDHYKVKLDN----------LEKKN---KD---QERIERNQQ 156 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH----------HHHHT---CC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHhHHH----------HHhcc---ch---HHHHHHhHH
Confidence 478888888888888887653321 23445555556554432 33221 11 223333333
Q ss_pred ---HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHh
Q 024714 94 ---KIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALA 167 (263)
Q Consensus 94 ---ki~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~ 167 (263)
+-+.--..+|-++|+-.+ ++-|.|||.++|..+. +=..+--|-+|++.|..
T Consensus 157 KLssAEtaYkqvcsDiInkMn-----------------kll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 157 KFKDAEAAYSSVCADLIQKME-----------------TVWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred HhhhHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 334445667777776555 4567888989887653 22334468888888753
No 140
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=42.41 E-value=66 Score=24.72 Aligned_cols=46 Identities=15% Similarity=0.111 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 5688899999865 23443 445566666555 7999999998888776
No 141
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=41.95 E-value=65 Score=25.43 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=27.0
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 8 REENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 8 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
-+.++..+...-+.|+|++++.++.+++..+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~ 34 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALN 34 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 4577888888889999999999999998875
No 142
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=41.94 E-value=1.9e+02 Score=25.81 Aligned_cols=45 Identities=7% Similarity=0.034 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhh
Q 024714 11 NVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNV 58 (263)
Q Consensus 11 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~ 58 (263)
+..++.+..+.|+|++++.++.++++.+ |. +..=.+-+..+|...
T Consensus 203 ~~~lg~~~~~~g~~~eAl~~~~~al~l~--P~-~~~a~~~lg~~l~~l 247 (382)
T 2h6f_A 203 WQHRQWVIQEFKLWDNELQYVDQLLKED--VR-NNSVWNQRYFVISNT 247 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHC--TT-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHh
Confidence 4456666677777777777777777665 33 344445555555543
No 143
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=40.72 E-value=41 Score=30.80 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHhcCCC--------CCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAP--------THPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~p--------t~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +|+.++|+....+|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 5688888888876521 110 134567777888887776 6888888888777654
No 144
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=39.91 E-value=1.5e+02 Score=23.96 Aligned_cols=30 Identities=7% Similarity=-0.078 Sum_probs=25.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
.-+..++.+..+.|+|++++.+++++++..
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 85 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARMLD 85 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 445678889999999999999999999876
No 145
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=39.82 E-value=23 Score=30.98 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=14.6
Q ss_pred hhhhhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024714 176 RLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 176 rLgLaLN~SVF~yEi~~~~~~A~~iak~af 205 (263)
+..+.+|.+..|+. +|+.++|+....+|+
T Consensus 195 ~~~~~~nla~~~~~-~g~~~~A~~~~~~al 223 (336)
T 1p5q_A 195 RLASHLNLAMCHLK-LQAFSAAIESCNKAL 223 (336)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 34444555554443 455555555555443
No 146
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=38.96 E-value=89 Score=22.66 Aligned_cols=47 Identities=15% Similarity=0.093 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ 207 (263)
+.|...|++++.. .|.+| ....+.+..++ -.|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALD-NLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHH-HcCcHHHHHHHHHHHHhc
Confidence 4677788887754 23343 33445555444 479999999988887654
No 147
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=38.49 E-value=60 Score=29.98 Aligned_cols=26 Identities=8% Similarity=-0.146 Sum_probs=13.4
Q ss_pred hhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 180 ALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 180 aLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
..|.+.-|+. +|+.++|+...++|+.
T Consensus 77 ~~~lg~~~~~-~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 77 YYRRAASNMA-LGKFRAALRDYETVVK 102 (477)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3344444333 5666666665555543
No 148
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=38.43 E-value=1.2e+02 Score=25.16 Aligned_cols=71 Identities=14% Similarity=0.175 Sum_probs=44.9
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024714 40 VEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (263)
Q Consensus 40 ~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~L 114 (263)
.|+||.|-|.=|..-.|...-..|.+.|-+..--...-.+.. ++-++-.++.++++..+.+..+.-||..+
T Consensus 104 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~----kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 104 LPPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE----GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999999998888888888877421111100100 01234445666777777766666666543
No 149
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=38.15 E-value=80 Score=26.23 Aligned_cols=69 Identities=19% Similarity=0.284 Sum_probs=42.6
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 024714 40 VEELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESH 113 (263)
Q Consensus 40 ~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~ 113 (263)
.|+||.|-|.=|..-.|...-..|.+.|-+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1dd5_A 102 FPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEG-----LIPEDDAKRLENEIQKLTDEFIEKLDEV 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999988888888888887732110 100000 0113344456666666666666666654
No 150
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=37.28 E-value=1e+02 Score=21.46 Aligned_cols=59 Identities=10% Similarity=0.106 Sum_probs=40.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS 71 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 71 (263)
.-+..++.+..+.|+|++++.+++++++.+ |.. .+=...+..+|-. .+....|...+..
T Consensus 28 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 86 (117)
T 3k9i_A 28 ECYLGLGSTFRTLGEYRKAEAVLANGVKQF--PNH-QALRVFYAMVLYN-LGRYEQGVELLLK 86 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCc-hHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 345678888899999999999999999887 553 4555555555543 3455555555543
No 151
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=36.62 E-value=1.1e+02 Score=21.50 Aligned_cols=53 Identities=17% Similarity=0.021 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
..|..-|+.|+......-. ..+.+-.+..++++-+| -+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 3577888888877642211 12233344445554444 58999999998888765
No 152
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=36.37 E-value=84 Score=26.09 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=42.1
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh----hhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 024714 40 VEELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESH 113 (263)
Q Consensus 40 ~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~ 113 (263)
.|+||.|-|.=|..-.|...-..|.+.|-+..--. +.+..+ .+-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1ise_A 102 LPPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAA 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999988888888888887732110 100001 0113344455666666666666666654
No 153
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=35.68 E-value=93 Score=20.43 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=15.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 12 VYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 12 ~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
..++.+..+.|+|++++.+++++++..
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~ 36 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLD 36 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhC
Confidence 344555555566666666666665543
No 154
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=35.51 E-value=58 Score=27.36 Aligned_cols=51 Identities=16% Similarity=0.040 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHh--cCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 024714 155 LLAYKSAQDIALA--ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI 209 (263)
Q Consensus 155 ~~aY~~A~~la~~--~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai 209 (263)
..-|++|...... .+.|.+ .....+.+..|+ -+|+.++|+...++|+.-.-
T Consensus 51 ~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 51 MQQPEQALADCRRALELDGQS---VKAHFFLGQCQL-EMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TTCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCc
Confidence 3446666666543 344444 344455555544 47899998888888876543
No 155
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=35.39 E-value=88 Score=25.94 Aligned_cols=69 Identities=17% Similarity=0.157 Sum_probs=42.2
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHh----hhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 024714 40 VEELTVEERNLLSVAYKNVIGARRASWRIISSIE----QKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESH 113 (263)
Q Consensus 40 ~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ie----qk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~ 113 (263)
.|+||.|-|.=|..-.|...-..|.+.|-+..-- .+.+..+ .+-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1is1_A 102 LPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEV 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3889999999999998888888888888773211 0110001 0113344456666666666666666654
No 156
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=34.74 E-value=60 Score=27.32 Aligned_cols=46 Identities=9% Similarity=0.086 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|..+|++|+.+. |.+ ..+.++++.|+.. .|+.++|+.+-.+|+.
T Consensus 186 ~~A~~~~~~al~~~-----p~~---~~~~~~~~~~~~~-~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 186 SVAFKIFELGLKKY-----GDI---PEYVLAYIDYLSH-LNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHHHHH-----TTC---HHHHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----CCc---HHHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 56788888888652 333 3566888877654 6888888776665554
No 157
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=34.51 E-value=1.1e+02 Score=22.76 Aligned_cols=46 Identities=11% Similarity=-0.042 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+. +.|.+|.- ..+.++.++ -+|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~-~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQ-AMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHH-HHhhHHHHHHHHHHHHh
Confidence 467777777764 35556533 345555554 47999999988887765
No 158
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=34.34 E-value=94 Score=25.78 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=41.5
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHh----hhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 024714 40 VEELTVEERNLLSVAYKNVIGARRASWRIISSIE----QKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESH 113 (263)
Q Consensus 40 ~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ie----qk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~ 113 (263)
.|+||.|-|.=|..-.|...-..|.+.|-+..-- .+.+..+ .+-++-.++.++++..+.+..+.-||..
T Consensus 102 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~ 174 (185)
T 1wqg_A 102 VPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDEL 174 (185)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3889999999999988888888888887773211 1111001 0113334455566666666666666553
No 159
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=33.97 E-value=1.4e+02 Score=28.85 Aligned_cols=53 Identities=19% Similarity=-0.013 Sum_probs=35.4
Q ss_pred hhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCC-cchhhhhhhHHHHHHHHhC
Q 024714 138 LAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTH-PIRLGLALNFSVFYYEILN 192 (263)
Q Consensus 138 laE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~-pirLgLaLN~SVF~yEi~~ 192 (263)
.||....+.-.+++++|.++|++|++..++ +..|+ |--.-..||- +-.||..|
T Consensus 435 k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aG 488 (526)
T 2wb7_A 435 KAKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAG 488 (526)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhcc
Confidence 466677777778999999999999999964 55444 4333333333 33466544
No 160
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=33.64 E-value=83 Score=26.12 Aligned_cols=74 Identities=19% Similarity=0.202 Sum_probs=43.7
Q ss_pred CCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 024714 40 VEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (263)
Q Consensus 40 ~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eii~lId~~L 114 (263)
.|+||.|-|.=|..-.|...-..|.+.|-+..--...- +...+...+-++-.++.++++..+.+..+.-||..+
T Consensus 103 iP~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 103 IPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999988888888888887732111000 000000011234445666666666666666666543
No 161
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=32.80 E-value=2.3e+02 Score=24.00 Aligned_cols=45 Identities=18% Similarity=0.157 Sum_probs=33.1
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHh
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYK 56 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayK 56 (263)
.-+..++.+.-+.|+++++..+.+..+..+ |. +.+-...+..+|.
T Consensus 34 ~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~--p~-~~~~~~~lg~~~~ 78 (388)
T 1w3b_A 34 GVLLLLSSIHFQCRRLDRSAHFSTLAIKQN--PL-LAEAYSNLGNVYK 78 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CC-chHHHHHHHHHHH
Confidence 446678888889999999999999988775 43 4555566665553
No 162
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=31.77 E-value=1.4e+02 Score=21.30 Aligned_cols=46 Identities=13% Similarity=0.016 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++|+.+ .|.+| ..-.+.++.+.. .|+.++|+...++|+.
T Consensus 34 ~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 34 AEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5677788888753 34443 233444444443 6999888876666554
No 163
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=31.73 E-value=1.7e+02 Score=22.25 Aligned_cols=57 Identities=14% Similarity=-0.031 Sum_probs=34.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRII 69 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l 69 (263)
+.+..++....+.|+|++++.++++++..+ | -+.+=...|..+|-. .+....|...+
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--P-~~~~~~~~lg~~~~~-~g~~~~Ai~~~ 93 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYD--F-YNVDYIMGLAAIYQI-KEQFQQAADLY 93 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--C-CCHHHHHHHHHHHHH-HccHHHHHHHH
Confidence 445667777778888888888888888765 3 345555555665532 23333443333
No 164
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=31.42 E-value=2.3e+02 Score=23.57 Aligned_cols=51 Identities=14% Similarity=0.214 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 151 ~~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
.+.|...|++|+... .++|.++ ..+-.+|..|+.. .|+.+.|..+.+++..
T Consensus 219 ~~~A~~~~~~al~~~--~l~p~~~--~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 219 DNNTRVLFERVLTSG--SLPPEKS--GEIWARFLAFESN-IGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHHHHHHHHHHHSS--SSCGGGC--HHHHHHHHHHHHH-HSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--CCCHHHH--HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 357899999997531 3555433 3456777777765 6999999877666554
No 165
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=31.38 E-value=89 Score=23.91 Aligned_cols=53 Identities=11% Similarity=-0.015 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhcC--------CCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAEL--------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L--------~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~af 205 (263)
+.|...|++|+.+...+- ...+|-......|.+..++. +|+.++|+...++++
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 568889999886532100 00234444566677766665 799999987666554
No 166
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=31.32 E-value=1.5e+02 Score=21.44 Aligned_cols=29 Identities=7% Similarity=0.067 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 10 ~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
.+..+|....+.|+|++++.++++++..+
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~ 48 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLD 48 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhC
Confidence 34455666666677777777666666554
No 167
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=31.08 E-value=1.2e+02 Score=20.33 Aligned_cols=46 Identities=20% Similarity=0.329 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|...|++++.. .|.+| ....+.+..++ -.|+.++|+....+++.
T Consensus 52 ~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 52 DEAIEYYQKALEL-----DPRSA---EAWYNLGNAYY-KQGDYDEAIEYYQKALE 97 (136)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCch---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 4577777777654 23333 22334444333 46888888887777664
No 168
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=31.05 E-value=1.1e+02 Score=23.01 Aligned_cols=30 Identities=27% Similarity=0.206 Sum_probs=21.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
+-+..++.+..+.|+|++++.++.+++..+
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 138 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVN 138 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 345566777777778888777777777665
No 169
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=30.52 E-value=1.2e+02 Score=20.07 Aligned_cols=28 Identities=14% Similarity=0.095 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 11 NVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 11 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
.+.+|....+.|+|++++..++++++.+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~ 30 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTE 30 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 3567888889999999999999999876
No 170
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=29.83 E-value=1.1e+02 Score=22.83 Aligned_cols=47 Identities=17% Similarity=0.282 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCCh--HHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSP--DRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~--~~A~~iak~afd 206 (263)
+.|..+|++|+.+. |.+| .+..+.+..+|.-.|+. ++|+...++++.
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 57889999998764 3443 34456666655557887 999888777765
No 171
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=29.09 E-value=1.5e+02 Score=20.67 Aligned_cols=50 Identities=18% Similarity=0.152 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIS 210 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~iak~afd~ai~ 210 (263)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++...-.
T Consensus 60 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 60 EQALADCRRALEL-----DGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CchhH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHChh
Confidence 4678888888865 24443 344555555554 79999999988888876543
No 172
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=27.54 E-value=1.5e+02 Score=20.33 Aligned_cols=28 Identities=11% Similarity=0.102 Sum_probs=16.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 11 NVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 11 l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
+..+|....+.|+|++++..+++++...
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 32 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELY 32 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHC
Confidence 3445556666666666666666666554
No 173
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=27.52 E-value=81 Score=21.09 Aligned_cols=25 Identities=8% Similarity=0.092 Sum_probs=11.7
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhc
Q 024714 13 YMAKLAEQAERYEEMVEFMEKVAKT 37 (263)
Q Consensus 13 ~~Aklaeq~eRy~Dm~~~mk~~i~~ 37 (263)
.++.+..+.|+|++++.++++++..
T Consensus 43 ~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 43 NKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 3444444444555555444444443
No 174
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=27.41 E-value=1.8e+02 Score=21.16 Aligned_cols=79 Identities=8% Similarity=0.129 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhh---hcCCchhHHHHHHHHHHHHHHHH
Q 024714 24 YEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE---SRGNEDHVSVIKEYRSKIENELS 100 (263)
Q Consensus 24 y~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~---~~~~~~~~~~i~~yr~ki~~EL~ 100 (263)
|...+.-+...+..- +.++-++|+-+......-+..-..=++... +|-+.- ..........++.||..+..+|.
T Consensus 10 f~~~~~~i~~~l~~~--~~~~ge~Rk~~i~~ie~~ldEA~ell~qMe-lE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk 86 (97)
T 3onj_A 10 FKTTLEQAKASLAEA--PSQPLSQRNTTLKHVEQQQDELFDLLDQMD-VEVNNSIGDASERATYKAKLREWKKTIQSDIK 86 (97)
T ss_dssp HHHHHHHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHH--hccChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555444 678889999887777777776544444432 222221 00112355788899888877665
Q ss_pred HHHHH
Q 024714 101 KICDG 105 (263)
Q Consensus 101 ~~C~e 105 (263)
.--+.
T Consensus 87 ~~lk~ 91 (97)
T 3onj_A 87 RPLQS 91 (97)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 175
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=27.16 E-value=98 Score=23.27 Aligned_cols=37 Identities=16% Similarity=0.224 Sum_probs=28.1
Q ss_pred cCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhh
Q 024714 22 ERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVI 59 (263)
Q Consensus 22 eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i 59 (263)
++|+.++..++.+-..+. ..++.+++-.|---||-..
T Consensus 10 ~~F~~A~~~vk~l~~~g~-~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNGS-YRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSCSSCS-CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCC-CCCCHHHHHHHHHHHhhhc
Confidence 568889999988754331 3689999998888888864
No 176
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=26.57 E-value=1.5e+02 Score=21.16 Aligned_cols=29 Identities=10% Similarity=0.072 Sum_probs=22.8
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 024714 8 REENVYMAKLAEQAERYEEMVEFMEKVAK 36 (263)
Q Consensus 8 re~l~~~Aklaeq~eRy~Dm~~~mk~~i~ 36 (263)
=-+++-.|--.+++|+|++++.+-+..++
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34667777777889999999998887764
No 177
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=26.09 E-value=3.6e+02 Score=24.26 Aligned_cols=161 Identities=14% Similarity=0.055 Sum_probs=74.3
Q ss_pred HhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhh-HHHHHHHHHHhhhhhhcCCch-hHHHHHHHHHHHHH
Q 024714 20 QAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGAR-RASWRIISSIEQKEESRGNED-HVSVIKEYRSKIEN 97 (263)
Q Consensus 20 q~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~-R~s~R~l~~ieqk~~~~~~~~-~~~~i~~yr~ki~~ 97 (263)
..+++++.+..+..+... .+-..+-...+..+|-. .+.. ..|...+....+... .+.. ...+-.-|...
T Consensus 80 ~~~~~~~al~~l~~~~~~---~~~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p--~~~~a~~~lg~~~~~~--- 150 (474)
T 4abn_A 80 VQEEMEKTLQQMEEVLGS---AQVEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEP--ELVEAWNQLGEVYWKK--- 150 (474)
T ss_dssp HHHHHHHHHHHHHHHHTT---CCCCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHhcc---CchhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHc---
Confidence 345577777777776543 34556666666666644 3445 556555543322221 1111 11111111110
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchh
Q 024714 98 ELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRL 177 (263)
Q Consensus 98 EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pirL 177 (263)
.--.+.+...+..|-- ++.. ..+...|..|+.+.. .....+..-.+.|...|++|+++ .|.+|.
T Consensus 151 ---g~~~~A~~~~~~al~~---~p~~--~~~~~lg~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~-- 214 (474)
T 4abn_A 151 ---GDVTSAHTCFSGALTH---CKNK--VSLQNLSMVLRQLQT-DSGDEHSRHVMDSVRQAKLAVQM-----DVLDGR-- 214 (474)
T ss_dssp ---TCHHHHHHHHHHHHTT---CCCH--HHHHHHHHHHTTCCC-SCHHHHHHHHHHHHHHHHHHHHH-----CTTCHH--
T ss_pred ---CCHHHHHHHHHHHHhh---CCCH--HHHHHHHHHHHHhcc-CChhhhhhhHHHHHHHHHHHHHh-----CCCCHH--
Confidence 1112233333332211 1222 344556766655422 12222333456889999999875 345542
Q ss_pred hhhhhHHHHHHHH---h----CChHHHHHHHHHHHH
Q 024714 178 GLALNFSVFYYEI---L----NSPDRACNLAKQAFD 206 (263)
Q Consensus 178 gLaLN~SVF~yEi---~----~~~~~A~~iak~afd 206 (263)
...|.+..|... . |+.++|+...++|+.
T Consensus 215 -~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 215 -SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp -HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 223333333321 1 556666665555544
No 178
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=25.84 E-value=74 Score=25.95 Aligned_cols=75 Identities=17% Similarity=0.152 Sum_probs=48.2
Q ss_pred CCCCchhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCC----CcchhhhhhhHHHHHHHHhC
Q 024714 117 SASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPT----HPIRLGLALNFSVFYYEILN 192 (263)
Q Consensus 117 ~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt----~pirLgLaLN~SVF~yEi~~ 192 (263)
.+.++++-.-|+++--.. -.+..+ ...++-.+.|++|.. .+||+ ..-+.-|=++|+.| .++ +
T Consensus 9 ~p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~ 74 (161)
T 4h7y_A 9 MANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-Q 74 (161)
T ss_dssp -CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-H
T ss_pred CCCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-c
Confidence 345677877777762111 001112 466788899999874 46664 33455688999998 455 8
Q ss_pred ChHHHHHHHHHHH
Q 024714 193 SPDRACNLAKQAF 205 (263)
Q Consensus 193 ~~~~A~~iak~af 205 (263)
|+++|.++=+.|.
T Consensus 75 D~d~aR~vy~~a~ 87 (161)
T 4h7y_A 75 EPDDARDYFQMAR 87 (161)
T ss_dssp CGGGCHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9998887777663
No 179
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=25.71 E-value=1.8e+02 Score=20.63 Aligned_cols=59 Identities=12% Similarity=0.003 Sum_probs=42.0
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS 71 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ 71 (263)
.....++...-+.|+|++++..+++++..+ |. +.+=...+..+|-. .+....|...+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 76 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKE--PE-REEAWRSLGLTQAE-NEKDGLAIIALNH 76 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHC--CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 456788888999999999999999999876 44 45666677776653 3444555555543
No 180
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=25.35 E-value=29 Score=25.79 Aligned_cols=60 Identities=12% Similarity=0.257 Sum_probs=36.8
Q ss_pred hhHHHHHHhhccccchhhhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhh----hhhhHHHHHH
Q 024714 122 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLG----LALNFSVFYY 188 (263)
Q Consensus 122 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~la~~~L~pt~pirLg----LaLN~SVF~y 188 (263)
.+.+|+ .|+---|+-.+...-+ .-+....+..+.|++-- ...|.||..|+ +.-+|++|+-
T Consensus 5 ~~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 5 PTPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp CCCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344555 4455556666543311 12455666777777544 36899999998 6677877643
No 181
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=25.21 E-value=1e+02 Score=22.29 Aligned_cols=18 Identities=28% Similarity=0.139 Sum_probs=11.7
Q ss_pred CCCCCCcHHhHHHHHHHH
Q 024714 1 MSPTDSSREENVYMAKLA 18 (263)
Q Consensus 1 ~~~~~~~re~l~~~Akla 18 (263)
|.+|+-+++++-..|+||
T Consensus 1 m~~M~i~~e~V~~iA~LA 18 (92)
T 3kfu_G 1 MPGMELSPELLRKLETLA 18 (92)
T ss_dssp ----CCCHHHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHHh
Confidence 677888888888888876
No 182
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=24.66 E-value=63 Score=28.12 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCc--------------chhhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHP--------------IRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~p--------------irLgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
+.|..+|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+....+|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
No 183
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=24.54 E-value=3.5e+02 Score=25.99 Aligned_cols=196 Identities=18% Similarity=0.212 Sum_probs=96.3
Q ss_pred cCHHHHHHHHHHHhhcCCCCCCCHH---HHHHHHHH---HhhhhhhhHHHHHHHHHHhhhhhhcCCchhHHHHHHHHHHH
Q 024714 22 ERYEEMVEFMEKVAKTVDVEELTVE---ERNLLSVA---YKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKI 95 (263)
Q Consensus 22 eRy~Dm~~~mk~~i~~~~~~~Lt~e---ERnLlsva---yKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~ki 95 (263)
++|..-++-+++++... .....+ |-.+|-.| |..++..-+..+..|..-.+++....+..-...+..||.++
T Consensus 121 ~k~g~~l~~v~~~~~~~--~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~ 198 (526)
T 3iyk_A 121 EKFGKELEEVYNFMNGE--ANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKI 198 (526)
T ss_pred HHHHHHHHHHHHHHHHh--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHH
Confidence 45666677777776543 344443 44566655 55677777888888877777776554555567888888776
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhh-hc-ChhhHHHHH---HHHHHHHHHHH--------
Q 024714 96 ENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAE-FK-TGAERKEAA---ESTLLAYKSAQ-------- 162 (263)
Q Consensus 96 ~~EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE-~~-~~~~~~~~~---~~a~~aY~~A~-------- 162 (263)
..== +.|++=..-++ .|..==-.-|-||.---.|| +. -|.--...+ .-+...|+-.-
T Consensus 199 ~aL~-----~aIe~Er~~~~-----EEAIqe~~dmsaeI~E~AaeEVP~vGag~At~iATaRaieg~yKLkkvI~aLtGi 268 (526)
T 3iyk_A 199 DALK-----NAIEVERDGMQ-----EEAIQEIAGMTADVLEAASEEVPLIGAGMATAVATGRAIEGAYKLKKVINALSGI 268 (526)
T ss_pred HHHH-----HHHHHHHhHHH-----HHHHHHHhcchHHHHHHHhhhCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3211 11111111111 00000011233333222222 11 122221211 12345555432
Q ss_pred HHHHhcCCCCCcchhhhhhhHHHHHHHHhCChHHHHHHH--HHHHHHHHHhhcccCCcchHhHHHHHHHHHh
Q 024714 163 DIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLA--KQAFDEAISELDTLGEESYKDSTLIMQLLRD 232 (263)
Q Consensus 163 ~la~~~L~pt~pirLgLaLN~SVF~yEi~~~~~~A~~ia--k~afd~ai~~ld~l~ee~~~ds~~IlqLLrD 232 (263)
++.....|+-||--|..+|-. =+ .-..|..-|.-+. ...+++--.+++.+.++..+-....++--+.
T Consensus 269 dlsHl~~P~I~p~~iet~L~~-~~--~~i~D~~L~~~v~sK~~~v~E~~~Ev~Hi~~~i~P~~kk~~~~~~~ 337 (526)
T 3iyk_A 269 DLTHLRTPKIEPSVVSTILEY-RA--KEIPDNALAVSVLSKNRAIQENHKELMHIKNEILPRFKKAMDEEKE 337 (526)
T ss_pred CchhccCCCCCHHHHHHHHhC-CC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233346889999988887742 01 1123333333222 2456666666666666665555555544333
No 184
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=24.16 E-value=2.1e+02 Score=23.69 Aligned_cols=30 Identities=20% Similarity=0.068 Sum_probs=22.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~ 38 (263)
+-...+|.+..+.|||++++..+.+++..+
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~ 249 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXD 249 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcc
Confidence 345567777778888888888888888766
No 185
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=23.93 E-value=90 Score=27.94 Aligned_cols=47 Identities=11% Similarity=0.054 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcch-hhhhhhHHHHHHHHhCChHHHHHHHHHHHH
Q 024714 152 ESTLLAYKSAQDIALAELAPTHPIR-LGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (263)
Q Consensus 152 ~~a~~aY~~A~~la~~~L~pt~pir-LgLaLN~SVF~yEi~~~~~~A~~iak~afd 206 (263)
++|.+.|++|+.++ |-. +..-.-|+-|+..-.++.+.|....++|..
T Consensus 221 ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 221 EKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 57999999999874 433 555667777777767889888887777655
No 186
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=23.58 E-value=1.2e+02 Score=27.84 Aligned_cols=10 Identities=30% Similarity=0.786 Sum_probs=3.6
Q ss_pred cCHHHHHHHH
Q 024714 22 ERYEEMVEFM 31 (263)
Q Consensus 22 eRy~Dm~~~m 31 (263)
|+|++++.+.
T Consensus 20 g~~~~A~~~~ 29 (477)
T 1wao_1 20 KDYENAIKFY 29 (477)
T ss_dssp TCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 3333333333
No 187
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=23.46 E-value=2.3e+02 Score=21.13 Aligned_cols=63 Identities=8% Similarity=-0.041 Sum_probs=43.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQ 74 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~ieq 74 (263)
.-+..++.+....|+|++++.++.+++... |. +..-...+..+|-...+....+...+....+
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIK--PD-SAEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhC--CC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 345678888899999999999999999876 43 3444555555554432556666666655443
No 188
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=23.32 E-value=7.8e+02 Score=27.15 Aligned_cols=23 Identities=13% Similarity=0.122 Sum_probs=19.8
Q ss_pred HHHHHHHHhCChHHHHHHHHHHH
Q 024714 183 FSVFYYEILNSPDRACNLAKQAF 205 (263)
Q Consensus 183 ~SVF~yEi~~~~~~A~~iak~af 205 (263)
-.|-+|+-.|..++|+.+..+|+
T Consensus 1285 eli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1285 ELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHh
Confidence 55678899999999999999883
No 189
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=23.21 E-value=2.3e+02 Score=21.02 Aligned_cols=36 Identities=25% Similarity=0.269 Sum_probs=25.3
Q ss_pred HHHHHHHHHh---cCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhh
Q 024714 12 VYMAKLAEQA---ERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIG 60 (263)
Q Consensus 12 ~~~Aklaeq~---eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~ 60 (263)
.+.-+-|+.+ |||||+|++-++.+ .+|+-|+|.+-+
T Consensus 16 H~~~RrAe~ll~~gkydeAIech~kAa-------------~yL~eAmkltqs 54 (97)
T 2crb_A 16 HQQSRRADRLLAAGKYEEAISCHRKAT-------------TYLSEAMKLTES 54 (97)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH-------------HHHHHHHTTCCC
T ss_pred hHhhhHHHHHHhcCCHHHHHHHHHHHH-------------HHHHHHHHhhcc
Confidence 3445666655 99999999998876 356677776533
No 190
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=22.77 E-value=1.5e+02 Score=18.75 Aligned_cols=60 Identities=17% Similarity=0.176 Sum_probs=41.2
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q 024714 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSI 72 (263)
Q Consensus 9 e~l~~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~Lt~eERnLlsvayKn~i~~~R~s~R~l~~i 72 (263)
.-+..++.+..+.|+|++++.++++.+... |. +..-...+..+|-. .+....+...+...
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a 69 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELD--PN-NAEAWYNLGNAYYK-QGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 345668888899999999999999999876 43 34444555555543 45556666666543
No 191
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=20.09 E-value=44 Score=26.72 Aligned_cols=74 Identities=19% Similarity=0.186 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhccccchhhhhcChh--hHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 024714 98 ELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGA--ERKEAAESTLLAYKSAQDIALAELAPTHP 174 (263)
Q Consensus 98 EL~~~C~eii~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~--~~~~~~~~a~~aY~~A~~la~~~L~pt~p 174 (263)
+|..-...+.+.|...| .+.+++++-|.-+|.+-+---.++...|. ...++.. ..+.|+.-.+-++..|..+-|
T Consensus 61 ~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~lK~-~~~~ykaLS~~aK~dL~k~FP 136 (140)
T 2w9y_A 61 ELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAKR-LHQEFQSLSSEDQAALRKNNP 136 (140)
T ss_dssp HHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHHHH-HHHHHHTSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHH-HHHHHHcCCHHHHHHHHHhCc
Confidence 44455556666666665 34578999999999776655555543331 1122222 226666555555544444444
Done!