BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024715
(263 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 95/211 (45%), Gaps = 33/211 (15%)
Query: 22 FTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDP 81
+C +C+E + K C P C +C+ RY+ +VQ A+I CP +C +LD
Sbjct: 1 MSCRVCLE----DRSIKPLPCCKKPVCDECLKRYLSSQVQLGQ-AEIQCPITECNKHLD- 54
Query: 82 FACEPVIPASLFSKWCDVLCEDYVLGFER---SYCPNTNCMAL--------VVNECERSG 130
E I SL D++ Y L R S P C + N +
Sbjct: 55 ---ESTILYSLPHD--DIIKYKYFLELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSEN 109
Query: 131 KVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRN----LRD-QNDIVFGQLVERMKWARCP 185
K+K QCP+C+ +CF+C WH G C E + LR N+I GQ +CP
Sbjct: 110 KLK-IQCPSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIEHGQ----RNAQKCP 164
Query: 186 ACGHCVERKDGCSVVMC-RCNTRFCYECGRK 215
C ++R +GC + C +CNT FCY CG +
Sbjct: 165 RCKVHIQRTEGCDHMTCSQCNTNFCYRCGER 195
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 47 FCQDCIARYIQVKVQDDNTAKIDCPGLDC--KHNLDPFACEPVIPASLFSKWCDVLCEDY 104
FC C+ +Y+++ +++ I CP C + +L E ++ A + K+ + E
Sbjct: 42 FCTLCLKQYVELLIKEGLETAISCPDASCPKRGHLQENEIECMVAAEIMQKYKKLQFEKE 101
Query: 105 VLGFE-RSYCPNTNCMALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRN 163
+L R++CP+++C A+ + + + QC C FC CK WH G C E+
Sbjct: 102 ILLDPCRTWCPSSSCQAVCKLQEKGIQNPQLVQCSACDIEFCSACKANWHPGQGCPENMA 161
Query: 164 ---LRDQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR-CNTRFCYEC 212
L + F L + + RCP C +ER +GC+ +MC+ C FC+ C
Sbjct: 162 ITFLPGDSSSFFKSLEDDVPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYC 214
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 22 FTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHN--L 79
TC++C+ + K C FC C+ +Y+Q+ +++ + I CP + C ++ L
Sbjct: 28 ITCKLCLCEQSLDK-MTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTL 86
Query: 80 DPFACEPVIPASLFSKWCDVLCEDYV-LGFERSYCPNTNCMALVVNECERSGKVKKTQCP 138
++P F + + E V L R++CP +C + G+ +CP
Sbjct: 87 QEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECP 146
Query: 139 NCKQWFCFQCKLKWHAGYRCEESRN--LRDQNDIVFGQLVERMKWARCPACGHCVERKDG 196
+C FC CK WHA C +S+ L ++ +FG E +CP C +ER +G
Sbjct: 147 SCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAE-APIKQCPVCRVYIERNEG 205
Query: 197 CSVVMCR-CNTRFCYECGRKISS 218
C+ +MC+ C FC+ C + + +
Sbjct: 206 CAQMMCKNCKHTFCWYCLQNLDN 228
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 22 FTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHN--L 79
TC++C+ + K C FC C+ +Y+Q+ +++ + I CP + C ++ L
Sbjct: 29 VTCKLCLCEQSLDK-MTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTL 87
Query: 80 DPFACEPVIPASLFSKWCDVLCEDYV-LGFERSYCPNTNCMALVVNECERSGKVKKTQCP 138
++P F + + E V L R++CP +C + G+ +CP
Sbjct: 88 QEAEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVLVECP 147
Query: 139 NCKQWFCFQCKLKWHAGYRCEESRN--LRDQNDIVFGQLVERMKWARCPACGHCVERKDG 196
+C FC CK WHA C +S+ L ++ +FG + +CP C +ER +G
Sbjct: 148 SCHLKFCSCCKDAWHAEVSCRDSQPGILPTEHGTLFGTETD-APIKQCPVCRVYIERNEG 206
Query: 197 CSVVMCR-CNTRFCYECGRKISS 218
C+ +MC+ C FC+ C + + +
Sbjct: 207 CAQMMCKNCKHTFCWYCLQNLDN 229
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 47 FCQDCIARYIQVKVQDDNTAKIDCPGLDC--KHNLDPFACEPVIPASLFSKWCDVLCEDY 104
FC C+ +Y+++ +++ I CP C + +L E ++ A + ++ + E
Sbjct: 42 FCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFERE 101
Query: 105 VLGFE--RSYCPNTNCMALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESR 162
VL F+ R++CP + C A+ + + QC C+ FC CK WH G C E+
Sbjct: 102 VL-FDPCRTWCPASTCQAVCQLQDVGLQTPQPVQCKACRMEFCSTCKASWHPGQGCPETM 160
Query: 163 N---LRDQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR-CNTRFCYEC 212
L + F + RCP C +ER +GC+ +MC+ C FC+ C
Sbjct: 161 PITFLPGETSAAFKMEEDDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYC 214
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Query: 22 FTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHN--L 79
TC++C+ + K + C FC C+ +Y+ + +++ + I CP + C ++ L
Sbjct: 28 VTCKLCLCEQSLDKMTMLQE-CQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGTL 86
Query: 80 DPFACEPVIPASLFSKWCDVLCEDYV-LGFERSYCPNTNCMALVVNECERSGKVKKTQCP 138
++P F + + E V + R++CP +C + G+ +CP
Sbjct: 87 QETEIACLVPLDEFQLYQRLKFEREVHMDPLRTWCPVADCQTVCHISAGDPGQPVLVECP 146
Query: 139 NCKQWFCFQCKLKWHAGYRCEESRNLRDQNDIVFGQLVERMKWARCPACGHCVERKDGCS 198
+C FC CK WH C +S++ ++ +FG + +CP C +ER +GC+
Sbjct: 147 SCHLKFCSCCKDAWHEESSCRDSQSAMPEHGALFGTDADA-PIKQCPVCRIYIERNEGCA 205
Query: 199 VVMCR-CNTRFCYECGRKISS 218
+MC+ C FC+ C + + +
Sbjct: 206 QMMCKNCKHTFCWYCLQNLDN 226
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 23 TCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDC--KHNLD 80
+C++C+ A ++ C FC C+ +Y+++ +++ I CP C + +L
Sbjct: 19 SCKLCLGEYPA-EQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQ 77
Query: 81 PFACEPVIPASLFSKWCDVLCEDYVLGFE--RSYCPNTNCMALVVNECERSGKVKKTQCP 138
E ++ A + ++ + E VL F+ R++CP + C A+ + + QC
Sbjct: 78 ENEIECMVAAEIMQRYKKLQFEREVL-FDPCRTWCPASTCQAVCQLQDIGLQTPQLVQCK 136
Query: 139 NCKQWFCFQCKLKWHAGYRCEESRN---LRDQNDIVFGQLVERMKWARCPACGHCVERKD 195
C FC CK +WH G C E+ L + F RCP C +ER +
Sbjct: 137 ACDMEFCSACKARWHPGQGCPETMPITFLPGETSSAFKMEEGDAPIKRCPKCRVYIERDE 196
Query: 196 GCSVVMCR-CNTRFCYEC 212
GC+ +MC+ C FC+ C
Sbjct: 197 GCAQMMCKNCKHAFCWYC 214
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 94/226 (41%), Gaps = 37/226 (16%)
Query: 12 YLEKGGGGSSFT------CEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNT 65
Y GG G + C +C+E K K C C++C+ Y+ +VQ
Sbjct: 218 YSGLGGVGDPYAPLMVLMCRVCLE----DKPIKPLPCCKKAVCEECLKIYLSSQVQLGQV 273
Query: 66 AKIDCPGLDCKHNLDPFACEPVIPASLFSKWCDVLCEDYVLGFER---SYCPNTNCMALV 122
+I CP +C L+ E + +L + D + Y L R S P C
Sbjct: 274 -EIKCPVTECFEFLE----ETTVVYNLTHE--DSIKYKYFLELGRIDSSTKPCPQCKHFT 326
Query: 123 -------VNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRN----LRD-QNDI 170
+ RS K QCP C+ +CF+C WH G C+E + LR ++I
Sbjct: 327 TFKKKGHIPTPSRSESRYKIQCPTCQLIWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEI 386
Query: 171 VFGQLVERMKWARCPACGHCVERKDGCSVVMC-RCNTRFCYECGRK 215
GQ +CP C ++R +GC + C +CNT FCY CG +
Sbjct: 387 EHGQ----RNAQKCPKCKIHIQRTEGCDHMTCSQCNTNFCYRCGER 428
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 21 SFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLD 80
+ C+IC+E SK R C H FC DC + V++ + +I C C D
Sbjct: 116 TMKCDICMEE-DLSKYAMTRMECGHRFCNDCWKEHFTVRINEGEGKRIRCMAYKCNTICD 174
Query: 81 PFACEPVIPASLFSKWCDVLCEDYVLGFER-SYCPNTNCMALVVNECERSGKVKKTQCPN 139
++ L K+ L E YV +CP+T + + G V + +C +
Sbjct: 175 E--ARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDVDEVEC-S 231
Query: 140 CKQWFCFQCKLKWHAGYRCEE----SRNLRDQNDIVFGQLVERMKWARCPACGHCVERKD 195
C FCF C + H+ C + D+++ V V CP C ++++D
Sbjct: 232 CGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTVNT---KLCPKCSKPIQKRD 288
Query: 196 GCSVVMCRCNTRFCYECGRKISSGCSCQTIG 226
GC+ + C+C FC+ CG+ S +I
Sbjct: 289 GCNHMTCKCGQHFCWLCGQATGRDHSYSSIA 319
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 11/176 (6%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIP-ASLFSKWCDVLC 101
C H FC+ C ++ V V+D I C DC P++P L K+ L
Sbjct: 155 CQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVFPLLPNEELRDKYRRYLF 214
Query: 102 EDYVLG-FERSYCPNTNC-MALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCE 159
DYV F+ CP +C M + V E + ++ QC C + FCF+C+ +HA C
Sbjct: 215 RDYVESHFQLQLCPGADCPMVIRVQE----PRARRVQCNRCSEVFCFKCRQMYHAPTDCA 270
Query: 160 ESRNLRDQ--NDIVFGQLVERMKWARCPACGHCVERKDGCSVVMC-RCNTRFCYEC 212
R + +D + CP C C+E+ GC+ + C +C FC+ C
Sbjct: 271 TIRKWLTKCADDSETANYISAHT-KDCPKCNICIEKNGGCNHMQCSKCKHDFCWMC 325
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 8/178 (4%)
Query: 47 FCQDCIARYIQVKVQDDNTAKIDCPGLDC--KHNLDPFACEPVIPASLFSKWCDVLCE-D 103
FC C+ +Y+++ +++ I CP C + +L E ++ + ++ + E +
Sbjct: 42 FCTMCLKQYVELLIKEGFETAISCPDSACPKRGHLQENEIECMVATEIMQRYRKLQFEKE 101
Query: 104 YVLGFERSYCPNTNCMALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEE--- 160
+L R++CP++ C A+ + + + +C C FC CK WH C+E
Sbjct: 102 VLLDPSRTWCPSSTCQAVCQLKESDTVLPQLVRCSVCTLEFCSACKASWHPDQDCQENVP 161
Query: 161 -SRNLRDQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR-CNTRFCYECGRKI 216
+ L ++ F + RCP C +ER +GC+ +MC+ C FC+ C +
Sbjct: 162 ITSFLPGESSSFFKADDDDAPIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESL 219
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 10/211 (4%)
Query: 21 SFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLD 80
+ C++C+E S R C H FC DC + VK+ + + +I C +CK D
Sbjct: 118 TMKCDVCMEDDLPSN-VMTRMECGHRFCNDCWIGHFTVKINEGESKRILCMAHECKAICD 176
Query: 81 PFACEPVIPASLFSKWCDVLCEDYVLGFER-SYCPNTNCMALVVNECERSGKVKKTQCPN 139
++ L ++ L E YV +CP+ + + E V + C +
Sbjct: 177 EDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVVEVGC-S 235
Query: 140 CKQWFCFQCKLKWHAGYRCEE----SRNLRDQNDIVFGQLVERMKWARCPACGHCVERKD 195
C FCF C + H+ C + D+++ V V CP C ++++D
Sbjct: 236 CGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWITVNT---KLCPKCSKPIQKRD 292
Query: 196 GCSVVMCRCNTRFCYECGRKISSGCSCQTIG 226
GC+++ C+C FC+ CG+ + +I
Sbjct: 293 GCNLMTCKCGQHFCWLCGQATGRDHTYTSIA 323
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 22 FTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDC--KHNL 79
+C++C+ ++ + C FC C+ +Y+++ +++ I CP C + +L
Sbjct: 18 LSCKLCLGEFPL-EQMTTISQCQCIFCSLCLKQYVELLIKEGLETAISCPDSACPKQGHL 76
Query: 80 DPFACEPVIPASLFSKWCDVLCEDYVLGFE-RSYCPNTNCMALV-VNECERSGKVKKTQC 137
E ++ + + + E VL R++CP+++C A+ +NE E + QC
Sbjct: 77 LENEIECMVAGEVMQHYKRLQFEREVLLDPCRTWCPSSSCQAVCQLNEAEVQLP-QPVQC 135
Query: 138 PNCKQWFCFQCKLKWHAGYRCEE----SRNLRDQNDIVFGQLVERMKWARCPACGHCVER 193
P C FC C+ H G C+E + L +N + RCP C +ER
Sbjct: 136 PECSLRFCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEAPIKRCPKCKVYIER 195
Query: 194 KDGCSVVMCR-CNTRFCYEC 212
+GC+ +MC+ C FC+ C
Sbjct: 196 DEGCAQMMCKNCKHAFCWYC 215
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 62.0 bits (149), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 75/200 (37%), Gaps = 15/200 (7%)
Query: 24 CEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDC-KHNLDPF 82
C +C+ P+ + C H C+ C Y+ +++ + CP DC F
Sbjct: 2070 CPVCVSPLGCDDDLPSL-CCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAF 2128
Query: 83 ACEPVIPASLFSKWCDVLCEDYVLGFER-SYCPNTNCMALVVNECERSGKVKKTQCPNCK 141
V + SK+ L YV ++C N ++ C R G T C C
Sbjct: 2129 IRAIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRIL--C-RQGLGCGTTCSKCG 2185
Query: 142 QWFCFQCKL-KWHAGYRCEESRNLRDQNDIVFGQLVE-------RMKWARCPACGHCVER 193
CF C + H C D G VE ++ RCP+C +E+
Sbjct: 2186 WASCFNCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLISKRCPSCQAPIEK 2245
Query: 194 KDGCSVVMC-RCNTRFCYEC 212
+GC + C +CN FC+ C
Sbjct: 2246 NEGCLHMTCAKCNHGFCWRC 2265
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 11/176 (6%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIP-ASLFSKWCDVLC 101
C H FC+ C ++ V V+D + C DC P++P L K+ L
Sbjct: 156 CQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLF 215
Query: 102 EDYVLG-FERSYCPNTNC-MALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCE 159
DYV ++ CP +C M + V E + ++ QC C + FCF+C+ +HA C
Sbjct: 216 RDYVESHYQLQLCPGADCPMVIRVQE----PRARRVQCNRCNEVFCFKCRQMYHAPTDCA 271
Query: 160 ESRNLRDQ--NDIVFGQLVERMKWARCPACGHCVERKDGCSVVMC-RCNTRFCYEC 212
R + +D + CP C C+E+ GC+ + C +C FC+ C
Sbjct: 272 TIRKWLTKCADDSETANYISAHT-KDCPKCNICIEKNGGCNHMQCSKCKHDFCWMC 326
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 128 RSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRN----LRD-QNDIVFGQLVERMKWA 182
RS K QCP C+ +CF+C WH G C+E + LR ++I GQ
Sbjct: 74 RSESKYKIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQ----RNAQ 129
Query: 183 RCPACGHCVERKDGCSVVMC-RCNTRFCYECGRK 215
+CP C ++R +GC + C +CNT FCY CG +
Sbjct: 130 KCPKCKIHIQRTEGCDHMTCSQCNTNFCYRCGER 163
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 34/207 (16%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIPASLFSKWCDVLCE 102
C H +C+ C+ Y +++++D ++CP C P + ++ A LF+++ +L +
Sbjct: 238 CRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQ 297
Query: 103 DYV-LGFERSYCPNTNCMALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRC--- 158
+ L + YCP C V+ E + + C +C FC C+L +H C
Sbjct: 298 SSLDLMADVVYCPRPCCQLPVMQEPGCTMGI----CSSCNFAFCTLCRLTYHGVSPCKVT 353
Query: 159 -EESRNLRDQN-----------DIVFGQLV--------ERMKWAR-----CPACGHCVER 193
E+ +LR++ D +G+ V E +W CP CG +E+
Sbjct: 354 AEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEK 413
Query: 194 KDGCSVVMCR-CNTRFCYECGRKISSG 219
DGC+ + C C FC+ C +S
Sbjct: 414 LDGCNKMTCTGCMQYFCWICMGSLSRA 440
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIPASLFSKWCDVLCE 102
C H +C+ C+ Y +++++D ++CP C P + ++ A LF+++ +L +
Sbjct: 239 CKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQ 298
Query: 103 DYV-LGFERSYCPNTNCMALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCE-- 159
+ L + YCP C V+ E + + C +C FC C+L +H C+
Sbjct: 299 STLDLMADVVYCPRPCCQLPVMQEPGGTMAI----CSSCNFAFCTLCRLTYHGLSPCKVT 354
Query: 160 -----ESRNLRDQNDIVFGQLVERMKWAR---------------------CPACGHCVER 193
+ RN Q D + +E+ R CP CG +++
Sbjct: 355 AEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQK 414
Query: 194 KDGCSVVMCR-CNTRFCYECGRKIS 217
DGC+ + C C FC+ C +S
Sbjct: 415 LDGCNKMTCTGCMQYFCWICMGSLS 439
>sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1
SV=3
Length = 853
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 44 THPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIPASLFSKWCDVLCED 103
H FC++C+ RY Q V +++ C C + E V+P ++ K+ + E+
Sbjct: 521 AHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEE 580
Query: 104 YVLGFERSY---CPNTNCMALVVNECERSGKVKKTQCPN--CKQWFCFQCKLKW--HAGY 156
V CP+ + AL+ VK+ CPN C++ C +C+ W H G
Sbjct: 581 EVAAAYADELVRCPSCSFPALL------DSDVKRFSCPNPRCRKETCRKCQGLWKEHNGL 634
Query: 157 RCEESRNLRDQNDIVF-GQLVERMKWAR---CPACGHCVERKDGCSVVMCRCNTRFCYEC 212
CEE L +++DI + + E+M AR C CG + + +GC+ + CRC + CY C
Sbjct: 635 TCEE---LAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMCYLC 691
Query: 213 GRKI-----------SSGCSCQTIGFCQL 230
I S G CQ C L
Sbjct: 692 RVSINGYDHFCQHPRSPGAPCQECSRCSL 720
>sp|Q9NWF9|RN216_HUMAN E3 ubiquitin-protein ligase RNF216 OS=Homo sapiens GN=RNF216 PE=1
SV=3
Length = 866
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 31/209 (14%)
Query: 44 THPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIPASLFSKWCDVLCED 103
H FC++C+ RY Q V ++ C C + E V+P ++ K+ + E+
Sbjct: 533 AHLFCKECLIRYAQEAVFGSGKLELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEE 592
Query: 104 YVLGFERSY---CPNTNCMALVVNECERSGKVKKTQCPN--CKQWFCFQCKLKW--HAGY 156
V CP+ + AL+ VK+ CPN C++ C +C+ W H G
Sbjct: 593 EVAAAYADELVRCPSCSFPALL------DSDVKRFSCPNPHCRKETCRKCQGLWKEHNGL 646
Query: 157 RCEESRNLRDQNDIVF-GQLVERMKWAR---CPACGHCVERKDGCSVVMCRCNTRFCYEC 212
CEE L +++DI + + E+M AR C CG + + +GC+ + CRC + CY C
Sbjct: 647 TCEE---LAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMCYLC 703
Query: 213 GRKI-----------SSGCSCQTIGFCQL 230
I S G CQ C L
Sbjct: 704 RVSINGYDHFCQHPRSPGAPCQECSRCSL 732
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 12 YLEKGGGGSSFTCEICIEPMAASKKFKNRNL---CTHPFCQDCIARYIQVKVQDDNTAKI 68
Y + ++C P+ AS + ++ C H FC+DC Y + ++ + +I
Sbjct: 138 YKTTASATPQYRSQMC--PVCASSQLGDKFYSLACGHSFCKDCWTIYFETQIFQGISTQI 195
Query: 69 DCPGLDCKHNL-DPFACEPVIPASLFSKWCDVLCEDYVLGF-ERSYCPNTNCMALVVNEC 126
C C + + V + K+ +DYV E +CP NC ++V
Sbjct: 196 GCMAQMCNVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQ-IIVQSS 254
Query: 127 ERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRNLRDQ--NDIVFGQLVERMKWARC 184
E S K + C C FCF+C + +HA C+ + + +D + C
Sbjct: 255 EISAK--RAICKACHTGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYISAHT-KDC 311
Query: 185 PACGHCVERKDGCSVVMC-RCNTRFCYEC 212
P C C+E+ GC+ + C C FC+ C
Sbjct: 312 PKCHICIEKNGGCNHMQCFNCKHDFCWMC 340
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 30/229 (13%)
Query: 1 MGNTLQKKPNEYL-EKGGGGS-----SFTCEICIEPMAASKKFKNRNLCTHPFCQDCIAR 54
M +QK NE EK G C IC+ + + C+H FC+ C+
Sbjct: 1532 MRQEVQKMVNELAREKSALGEKPDEIELECPICLSEVDDGYSLEG---CSHLFCKACLLE 1588
Query: 55 YIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIPAS----LFSKWCDVLCEDYVLGFER 110
+ +++ + I C +DC P++ A L + D L + F
Sbjct: 1589 QFEASMRNFDAFPILCSHIDC--------GAPIVVADMRALLSQEKLDELISASLSAFVT 1640
Query: 111 S------YCPNTNCMALV-VNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRN 163
S +C +C ++ V + SG+ C C C +C L++H CE +
Sbjct: 1641 SSDGKLRFCSTPDCPSIYRVAGPQESGE--PFICGACHSETCTRCHLEYHPLITCERYKK 1698
Query: 164 LRDQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCRCNTRFCYEC 212
++ D+ + CP C +E+ DGC+ + CRC C+ C
Sbjct: 1699 FKENPDLSLKDWAKGKDVKECPICKSTIEKTDGCNHLQCRCGKHICWTC 1747
>sp|Q6ZMZ0|RN19B_HUMAN E3 ubiquitin-protein ligase RNF19B OS=Homo sapiens GN=RNF19B PE=1
SV=2
Length = 732
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 38/233 (16%)
Query: 10 NEYLEKGG-GGSSFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKI 68
E E GG G C +C+ + + + + C H C+DC+ Y+++++ + I
Sbjct: 104 EEAAEGGGPGAEEVECPLCLVRLPPERAPRLLS-CPHRSCRDCLRHYLRLEISESRV-PI 161
Query: 69 DCPGLDCKHNLDPFACEPVIP-ASLFSKWCDVLCEDYVLGFER-SYCPNTNCMALVVN-- 124
CP +C L+P ++ L K+ + + Y+ +CP +C V+
Sbjct: 162 SCP--ECSERLNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYG 219
Query: 125 -------ECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRNLRDQNDIVFGQLVE 177
CER G C+ FC+ CK WH C+ +R R Q V +
Sbjct: 220 CASCPKLTCEREG---------CQTEFCYHCKQIWHPNQTCDMARQQRAQTLRVRTKHTS 270
Query: 178 RMKWAR----------CPAC-GHCVERKDG-CSVVMCR-CNTRFCYECGRKIS 217
+ + + CP C + ++ DG C+ + C C FC+ C ++IS
Sbjct: 271 GLSYGQESGPADDIKPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEIS 323
>sp|Q9US46|ITT1_SCHPO E3 ubiquitin-protein ligase itt1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=itt1 PE=4 SV=1
Length = 435
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 44/231 (19%)
Query: 22 FTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHN--- 78
F C +C + + F+ C H CQ C+ Y + +Q+ ++I C LDC +
Sbjct: 172 FQCNVCFDEFNGTDCFQ-LTRCGHVSCQSCLRDYYTMCIQEGMFSQIKCIDLDCGKDAPV 230
Query: 79 LDPFACEPVIPASLFSKWCDVLCED-YVLGFERSYCPNTNCMALVVNECERSGKVKKTQC 137
L E ++ L +++ ++ + Y +CP + C +R K C
Sbjct: 231 LTLKELESIVGVQLTNRYKELEEKRRYENDSNIIFCPRSFCQG----PSKRDPGQKLAIC 286
Query: 138 PNCKQWFCFQCKLKWHA-------------------GYRCEESRNLRDQNDIVFGQLVER 178
C FC C+ WH Y+ E + ++++R
Sbjct: 287 QKCDFAFCSFCQATWHGDLSPCKLEGDSKKLVEMYLNYQENEPEKALELEKRYGKRIIDR 346
Query: 179 M-----------KWA-----RCPACGHCVERKDGCSVVMCRCNTRFCYECG 213
+ KW RCP C VER DGC + C C T FC+ CG
Sbjct: 347 LVEQVKNDEEAEKWVLLNGQRCPTCDRVVERIDGCCHMNCLCGTHFCFLCG 397
>sp|Q9BYM8|HOIL1_HUMAN RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo
sapiens GN=RBCK1 PE=1 SV=2
Length = 510
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 92/232 (39%), Gaps = 41/232 (17%)
Query: 24 CEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFA 83
C +C +A + R C H FC++C+ Q +++ A++ CP +D ++
Sbjct: 282 CPVCYSVLAPGEAVVLRE-CLHTFCRECL----QGTIRNSQEAEVSCPFIDNTYSCSGKL 336
Query: 84 CEPVIPASL----FSKWCDVLCEDYVLGFERS----YCPNTNCMALVVNECERSGKVKKT 135
E I A L + ++ D+ + RS +C +C C V +
Sbjct: 337 LEREIKALLTPEDYQRFLDL---GISIAENRSAFSYHCKTPDCKGW----CFFEDDVNEF 389
Query: 136 QCPNCKQWFCFQCKLKWHAGYRCEESRN---LRDQNDIVFGQLVERMK-------WARCP 185
CP C C CK H C+E + LR QND+ Q E +K RCP
Sbjct: 390 TCPVCFHVNCLLCK-AIHEQMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCP 448
Query: 186 ACGHCVERKDGCSVVMCR-CNTRFCY---------ECGRKISSGCSCQTIGF 227
C V++KDGC + C C+T C+ S GC C+ G
Sbjct: 449 QCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGI 500
>sp|Q9WUB0|HOIL1_MOUSE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus
musculus GN=Rbck1 PE=1 SV=2
Length = 508
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 97/254 (38%), Gaps = 41/254 (16%)
Query: 2 GNTLQKKPNEYLEKGGGGSSFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQ 61
GN LQ E C +C +A + R C H FC++C+ Q ++
Sbjct: 258 GNYLQHVQLEQRSLVLNTEPTECPVCYSVLAPGEAVVLRE-CLHTFCRECL----QGTIR 312
Query: 62 DDNTAKIDCPGLDCKHNLDPFACEPVIPASL----FSKWCDVLCEDYVLGFERS----YC 113
+ A++ CP +D ++ E I A L + ++ D+ + RS +C
Sbjct: 313 NSQEAEVACPFIDSTYSCPGKLLEREIRALLSPEDYQRFLDL---GVSIAENRSTLSYHC 369
Query: 114 PNTNCMALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRN---LRDQNDI 170
+C C V + CP C + C CK H C E ++ LR QND+
Sbjct: 370 KTPDCRGW----CFFEDDVNEFTCPVCTRVNCLLCK-AIHEHMNCREYQDDLALRAQNDV 424
Query: 171 VFGQLVERMK-------WARCPACGHCVERKDGCSVVMCR-CNTRFCY---------ECG 213
Q E +K CP C V++KDGC + C C+T C+
Sbjct: 425 AARQTTEMLKVMLQQGEAMHCPQCRIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPGGP 484
Query: 214 RKISSGCSCQTIGF 227
S GC C+ G
Sbjct: 485 GDTSGGCRCRVNGI 498
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 14/188 (7%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIPASLFSKWCDVLCE 102
C H +C DCI ++++ + + I CP CK + + + K+
Sbjct: 634 CDHVYCFDCITEHLRILITEGRVLDISCPHPQCKKEIKESEIYMLTNEKNWLKYQKFSMI 693
Query: 103 DYVLGFERSYCPNTNCMALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRC-EES 161
+ +CP +C V ER+ + CP C FC+ C H G +C E+
Sbjct: 694 ASLKTEPIKWCPTPDCDTPVRGGSERNPIL---NCPKCSNDFCWICGEYSHEGAKCGTEA 750
Query: 162 RNLRDQND-------IVFGQLVERMKW--ARCPACGHCVERKDGCSVVMC-RCNTRFCYE 211
L+ + + + +E K CP C +E+ DGC+ + C C +FC+
Sbjct: 751 MELQGRKNKSIESAATAYIDFLESNKHFVKPCPTCKSHIEKHDGCNHMTCINCQHQFCWL 810
Query: 212 CGRKISSG 219
C SG
Sbjct: 811 CMNPYQSG 818
>sp|A2A7Q9|RN19B_MOUSE E3 ubiquitin-protein ligase RNF19B OS=Mus musculus GN=Rnf19b PE=1
SV=2
Length = 732
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 36/199 (18%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIP-ASLFSKWCDVLC 101
C H C+DC+ Y+++++ + I CP +C L+P ++ L K+ + +
Sbjct: 134 CPHRSCRDCLRHYLRLEISESRV-PISCP--ECSERLNPHDIRLLLADPPLMHKYEEFML 190
Query: 102 EDYVLGFER-SYCPNTNCMALVVN---------ECERSGKVKKTQCPNCKQWFCFQCKLK 151
Y+ +CP +C V+ CER G C+ FC+ CK
Sbjct: 191 RRYLASDPDCRWCPAPDCGYAVIAYGCASCPKLTCEREG---------CQTEFCYHCKQI 241
Query: 152 WHAGYRCEESRNLRDQNDIVFGQLVERMKWAR----------CPAC-GHCVERKDG-CSV 199
WH C+ +R R Q V + + + + CP C + ++ DG C+
Sbjct: 242 WHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQESGPADDIKPCPRCSAYIIKMNDGSCNH 301
Query: 200 VMCR-CNTRFCYECGRKIS 217
+ C C FC+ C ++IS
Sbjct: 302 MTCAVCGCEFCWLCMKEIS 320
>sp|Q04638|ITT1_YEAST Translation termination inhibitor protein ITT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ITT1 PE=1
SV=1
Length = 464
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 94/262 (35%), Gaps = 73/262 (27%)
Query: 20 SSFTCEICIEPMAASKKFK----NRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDC 75
S++ C IC+E + K N N+ H C+ C Y +Q++ + + CP +
Sbjct: 176 SNYHCCICMEMEKGVRMIKLPCENANV-EHYLCRGCAKSYFTAMIQENRISSVRCPQCEY 234
Query: 76 KH-NLDPFAC---------EPVIPASLFSKWCDV-LCEDYVLGFERS-------YCPNT- 116
K L+ F P+IP S + D LCE Y F YCP
Sbjct: 235 KELKLEDFKSYKKMLKALFTPLIPVSFLKEVIDTELCERYEKMFYNQAATRLSKYCPYAC 294
Query: 117 ----NCMALVVNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRNLRDQNDIV- 171
C + E + QC C FCF C WH GY + + + DI+
Sbjct: 295 VTCRRCDSWCTKEDLDDAMI---QCQKCHFVFCFDCLHAWH-GYNNKCGKKVSLSTDIIE 350
Query: 172 -------------------FGQ----------LVERM----------KWARCPACGHCVE 192
+G+ L E+M RCP C VE
Sbjct: 351 EYLDDTVTSYERKRKLEAKYGRRVLELEVNDYLAEKMLDLAIKKEGSNLQRCPKCKVVVE 410
Query: 193 RKDGCSVVMCR-CNTRFCYECG 213
R +GC+ + C C T FC+ CG
Sbjct: 411 RSEGCNKMKCEVCGTLFCFICG 432
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 86/221 (38%), Gaps = 23/221 (10%)
Query: 13 LEKGGGGSSFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNT-AKIDCP 71
++ G C IC E + ++K C HP+C+ C YI K++D ++ CP
Sbjct: 110 VDVNGTEVDIQCGICFE--SYTRKEIASVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCP 167
Query: 72 GLDCKHNLDPFACEPVIPASLFSKWCDVLCEDYVL-GFERSYCPNTNCMALVVNECERSG 130
C + + V K+ YV G + +CP+ C V E SG
Sbjct: 168 EPSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGC-ECAVEFGESSG 226
Query: 131 KVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRN--LRDQNDIVFGQLVERMKWAR----- 183
C C FC+ C H+ CE ++Q++ E W
Sbjct: 227 --YDVACL-CSYRFCWNCSEDAHSPVDCETVSKWIFKNQDE------SENKNWILANSKP 277
Query: 184 CPACGHCVERKDGCSVVMC--RCNTRFCYECGRKISSGCSC 222
CP C +E+ GC+ + C C RFC+ CG+ S +C
Sbjct: 278 CPKCKRPIEKSHGCNHMTCSASCGHRFCWICGKSYSDHYAC 318
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 177 ERMKWARCPACGHCVERKDGCSV-VMCRCNTRFCYECGRKISSGCSCQTIG 226
++MKW P C VE + V C C+ RFC+ C S C+T+
Sbjct: 205 KKMKWCPSPGCECAVEFGESSGYDVACLCSYRFCWNCSEDAHSPVDCETVS 255
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 25/202 (12%)
Query: 24 CEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNT-AKIDCPGLDCKHNLDPF 82
C IC E + +++ R C HP+C+ C A YI K++D ++ CP C +
Sbjct: 128 CGICFE--SYTREEIARVSCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKD 185
Query: 83 ACEPVIPASLFSKWCDVLCEDYVL-GFERSYCPNTNCMALVVNECERSGKVKKTQCPN-- 139
E V + K+ + YV G + +CP+ C V E G + +
Sbjct: 186 MIEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAV----EFGGSESSSYDVSCL 241
Query: 140 CKQWFCFQCKLKWHAGYRCEESRN--LRDQNDIVFGQLVERMKWAR-----CPACGHCVE 192
C FC+ C H+ C+ ++Q++ E W CP C +E
Sbjct: 242 CSYRFCWNCSEDAHSPVDCDTVSKWIFKNQDE------SENKNWMLANSKPCPECKRPIE 295
Query: 193 RKDGCSVVMCR--CNTRFCYEC 212
+ DGC+ + C C FC+ C
Sbjct: 296 KNDGCNHMTCSAPCGHEFCWIC 317
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 178 RMKWARCPACGHCVE---RKDGCSVVMCRCNTRFCYECGRKISSGCSCQTIG 226
++KW P CG+ VE + V C C+ RFC+ C S C T+
Sbjct: 213 KIKWCPSPGCGYAVEFGGSESSSYDVSCLCSYRFCWNCSEDAHSPVDCDTVS 264
>sp|E6ZIJ1|HOIL1_DICLA RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Dicentrarchus labrax GN=rbck1 PE=3 SV=1
Length = 707
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 24 CEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLD----CKHNL 79
C IC + + R C H FC++C+ I + + ++ CP D C +L
Sbjct: 479 CRICYMDLQPGEGVLLRE-CLHCFCRECLRSVIMLSEE----PEVSCPYRDDTYSCACSL 533
Query: 80 DPFACEPVIPASLFSKWCDVLCEDYVLGFERSY-CPNTNCMALVVNECERSGKVKKTQCP 138
++PA + +W E SY C +C+ V E V CP
Sbjct: 534 QEREIRALVPAEEYERWLQRGLSVAESRCEGSYHCATPDCLGWCVYE----DTVNVFHCP 589
Query: 139 NCKQWFCFQCKLKWHAGYRCEESRN---LRDQNDI-------VFGQLVERMKWARCPACG 188
C++ C CK H G C++ ++ R ND + LV+ + CP CG
Sbjct: 590 VCRKHNCLICK-SIHEGMNCKQYQDDLAARAINDSAARRTTQLLKTLVQSGEAMHCPQCG 648
Query: 189 HCVERKDGCSVVMCR-CNTRFCY 210
V+++DGC + C C+T C+
Sbjct: 649 IIVQKRDGCDWLRCTVCHTEICW 671
>sp|Q949V6|ARI1_ARATH Probable E3 ubiquitin-protein ligase ARI1 OS=Arabidopsis thaliana
GN=ARI1 PE=2 SV=1
Length = 597
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 18/217 (8%)
Query: 19 GSSFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHN 78
S +C++C+E + R C H FC +C + V++ + + +I C C
Sbjct: 118 SSQMSCDVCMEDLPGDHM--TRMDCGHCFCNNCWTEHFTVQINEGQSKRIRCMAHQCNAI 175
Query: 79 LDPFACEPVIPA---SLFSKWCDVLCEDYVLGFER-SYCPNT-NCMALVVNECERSGKVK 133
D ++ L +K+ L E Y+ +CP+T +C + E K+
Sbjct: 176 CDEDIVRSLVSKKRPDLAAKFDRYLLESYIEDNRMVKWCPSTPHCGNAIRAE---DDKLC 232
Query: 134 KTQCPNCKQWFCFQCKLKWHAGYRCEE----SRNLRDQNDIVFGQLVERMKWARCPACGH 189
+ +C +C FCF C + H+ C + RD+++ + V CP C
Sbjct: 233 EVEC-SCGLQFCFSCLCQAHSPCSCLMWELWRKKCRDESETINWITVHT---KLCPKCYK 288
Query: 190 CVERKDGCSVVMCRCNTRFCYECGRKISSGCSCQTIG 226
VE+ GC++V C C FC+ CG S + ++I
Sbjct: 289 PVEKNGGCNLVRCICGQCFCWLCGGATGSDHTYRSIA 325
>sp|Q62921|HOIL1_RAT RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Rattus norvegicus GN=Rbck1 PE=1 SV=3
Length = 508
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 95/256 (37%), Gaps = 45/256 (17%)
Query: 2 GNTLQKKPNEYLEKGGGGSSFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQ 61
GN LQ E C +C +A + R C H FC++C+ Q ++
Sbjct: 258 GNYLQHVQLEQRSLVLNTEPAECPVCYSVLAPGEAVVLRE-CLHTFCRECL----QGTIR 312
Query: 62 DDNTAKIDCPGLDCKHNLDPFACEPVIPASLFSKWCDVLC--EDY--VLGFERSYCPNTN 117
+ A++ CP +D + ++C P L + L EDY L S N +
Sbjct: 313 NSQEAEVSCPFID-----NTYSC----PGKLLEREIRALLSPEDYQRFLDLGVSIAENRS 363
Query: 118 CMALVVNE------CERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRN---LRDQN 168
++ C V + CP C + C CK H C E ++ R +N
Sbjct: 364 TLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCK-AIHERMNCREYQDDLAHRARN 422
Query: 169 DIVFGQLVERMK-------WARCPACGHCVERKDGCSVVMCR-CNTRFCY---------E 211
D+ Q E ++ CP C V++KDGC + C C+T C+
Sbjct: 423 DVAAQQTTEMLRVMLQQGEAMYCPQCRIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPG 482
Query: 212 CGRKISSGCSCQTIGF 227
S GC C+ G
Sbjct: 483 GPGDTSGGCRCRVNGI 498
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 29/186 (15%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAK-IDCPGLDCKHNLDPFACEPVIPASLFS-KWCDVL 100
C H FC C Y+ K+ ++ + I CP C +D +I S K+ ++
Sbjct: 175 CGHKFCMQCWGEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 234
Query: 101 CEDYVL-GFERSYCPNTNCMALVVNECERSGKVKKTQCPN-------CKQWFCFQCKLKW 152
+V +CP +C +V K Q P+ C + FCF C W
Sbjct: 235 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVHCKCGRQFCFNCGENW 283
Query: 153 HAGYRCEESRNLR---DQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR---CNT 206
H +C+ R D + + K CP C +E+ GC+ ++CR C
Sbjct: 284 HDPVKCKWLRKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHMVCRNQNCKA 341
Query: 207 RFCYEC 212
FC+ C
Sbjct: 342 EFCWVC 347
>sp|Q84RR2|ARI2_ARATH Probable E3 ubiquitin-protein ligase ARI2 OS=Arabidopsis thaliana
GN=ARI2 PE=2 SV=1
Length = 593
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 26 ICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACE 85
IC+E + + R C H FC +C + VK+ + + +I C C D
Sbjct: 126 ICVEDVPGYQL--TRMDCGHSFCNNCWTGHFTVKINEGQSKRIICMAHKCNAICDEDVVR 183
Query: 86 PVIPAS---LFSKWCDVLCEDYVLGFER-SYCPNT----NCMALVVNE-CERSGKVKKTQ 136
++ S L K+ L E Y+ + +CP+T N + + +E CE +
Sbjct: 184 ALVSKSQPDLAEKFDRFLLESYIEDNKMVKWCPSTPHCGNAIRVEDDELCE-------VE 236
Query: 137 CPNCKQWFCFQCKLKWHAGYRCEESRNLR----DQNDIVFGQLVERMKWARCPACGHCVE 192
C +C FCF C + H+ C R D+++ V V CP C VE
Sbjct: 237 C-SCGLQFCFSCSSQAHSPCSCVMWELWRKKCFDESETVNWITVHTKP---CPKCHKPVE 292
Query: 193 RKDGCSVVMCRCNTRFCYECG 213
+ GC++V C C FC+ CG
Sbjct: 293 KNGGCNLVTCLCRQSFCWLCG 313
>sp|Q80TT8|CUL9_MOUSE Cullin-9 OS=Mus musculus GN=Cul9 PE=2 SV=2
Length = 1865
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 74/200 (37%), Gaps = 15/200 (7%)
Query: 24 CEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDC-KHNLDPF 82
C +C+ P+ C H C+ C Y+ +++ + CP DC F
Sbjct: 1409 CPVCVTPLGPHDD-SPSLCCLHCCCKSCWNEYLTTRIEQNFVLNCTCPIADCPAQPTGAF 1467
Query: 83 ACEPVIPASLFSKWCDVLCEDYVLGFER-SYCPNTNCMALVVNECERSGKVKKTQCPNCK 141
V + SK+ L YV ++C N ++ C R G T C C
Sbjct: 1468 IRNIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRIL--C-RQGLGSGTTCSKCG 1524
Query: 142 QWFCFQCKL-KWHAGYRCEESRNLRDQNDIVFGQLVE-------RMKWARCPACGHCVER 193
CF C + H C D G VE ++ RCP+C +E+
Sbjct: 1525 WASCFSCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLISKRCPSCQAPIEK 1584
Query: 194 KDGCSVVMC-RCNTRFCYEC 212
+GC + C RCN FC+ C
Sbjct: 1585 NEGCLHMTCARCNHGFCWRC 1604
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 29/186 (15%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAK-IDCPGLDCKHNLDPFACEPVIPASLFS-KWCDVL 100
C H FC C Y+ K+ ++ + I CP C +D +I S K+ ++
Sbjct: 173 CGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLI 232
Query: 101 CEDYVL-GFERSYCPNTNCMALVVNECERSGKVKKTQCPN-------CKQWFCFQCKLKW 152
+V +CP +C +V K Q P+ C + FCF C W
Sbjct: 233 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 281
Query: 153 HAGYRCEESRNLR---DQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR---CNT 206
H +C+ R D + + K CP C +E+ GC+ ++CR C
Sbjct: 282 HDPVKCKWLRKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHMVCRNQNCKA 339
Query: 207 RFCYEC 212
FC+ C
Sbjct: 340 EFCWVC 345
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 83/220 (37%), Gaps = 19/220 (8%)
Query: 16 GGGGSSFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNT-AKIDCPGLD 74
G C IC E + ++K R C HP+C+ C YI K++D ++ CP
Sbjct: 131 NGTEVDIQCGICFE--SYTRKEIARVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPS 188
Query: 75 CKHNLDPFACEPVIPASLFSKWCDVLCEDYVL-GFERSYCPNTNCMALVVNECERSGKVK 133
C + + V K+ YV G + +CP+ C V E +G
Sbjct: 189 CYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAV--EFGVNGSSS 246
Query: 134 KTQCPNCKQWFCFQCKLKWHAGYRCEE-SRNLRDQNDIVFGQLVERMKW-----ARCPAC 187
C FC+ C H+ CE S+ L D E M W CP C
Sbjct: 247 YDVSCLCSYKFCWNCCEDAHSPVDCETVSKWLLKNKD-----ESENMNWILAKTKPCPKC 301
Query: 188 GHCVERKDGCSVVMCR--CNTRFCYECGRKISSGCSCQTI 225
+E+ GC+ + C C FC+ C + +S +C
Sbjct: 302 KRPIEKNTGCNHMSCSAPCRHYFCWACLQPLSDHKACNAF 341
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 13 LEKGGGGSSFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDDNT-AKIDCP 71
+EK G S C IC+E ++ F +C H +C C Y+++KV + CP
Sbjct: 131 VEKSGNVS---CLICLEDYPPTQTFAL--ICNHRYCLPCYKNYLEIKVSEGPECIYTPCP 185
Query: 72 GLDCKHNLDPFACEPVIPASLFSKWCDVLCEDYVLGFER-SYCPNTNCMALVVNECERSG 130
CK + A + ++ +F ++ + + + YV + +CP C+ + C+R
Sbjct: 186 APKCKVIVHQDAFKQIVSPEVFERFNNFILKSYVDDNPQVKWCPAPGCIYSI--RCDRKE 243
Query: 131 KVKKTQCPNCKQWFCFQC---KLKWHAGYRCEES----RNLRDQNDIVFGQLVERMKWAR 183
+ + C C +CF C ++ H C + + D+++ V L K
Sbjct: 244 RKEAVNC-KCGFQYCFNCNDYEIGDHMPCPCSQVDKWLQKASDESENVTWMLANTKK--- 299
Query: 184 CPACGHCVERKDGCSVVMCR-----CNTRFCYEC 212
CP C +E+ GC + CR C FC+ C
Sbjct: 300 CPECRSPIEKNGGCMHMTCRKNAGGCGFEFCWLC 333
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCK------HNLDPFACEPVIPASLFSKW 96
C H FC+ C +++ ++ + ++I+C +C+ L PVI K+
Sbjct: 145 CGHCFCEHCWKSHVESRLSEGVASRIECMESECEVYAPSEFVLSIIKNSPVIKL----KY 200
Query: 97 CDVLCEDYVLGFER-SYCPNTNCMALVVNECERSGKVK--KTQCPNCKQWFCFQCKLKWH 153
L D V +C C ++ RS +VK + C C FC +C +H
Sbjct: 201 ERFLLRDMVNSHPHLKFCVGNECPVII-----RSTEVKPKRVTCMQCHTSFCVKCGADYH 255
Query: 154 AGYRCEESRNLRDQ--NDIVFGQLVERMKWARCPACGHCVERKDGCSVVMC-RCNTRFCY 210
A CE + + +D + CP C C+E+ GC+ + C RC FC+
Sbjct: 256 APTSCETIKQWMTKCADDSETANYISAHT-KDCPQCHSCIEKAGGCNHIQCTRCRHHFCW 314
Query: 211 EC 212
C
Sbjct: 315 MC 316
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 73/186 (39%), Gaps = 29/186 (15%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAK-IDCPGLDCKHNLDPFACEPVIPASLFS-KWCDVL 100
C H FC C Y+ K+ ++ + I CP +C +D +I S K+ ++
Sbjct: 179 CGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSKVKLKYQHLI 238
Query: 101 CEDYVL-GFERSYCPNTNCMALVVNECERSGKVKKTQCPN-------CKQWFCFQCKLKW 152
+V +CP +C +V K Q P+ C + FCF C W
Sbjct: 239 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 287
Query: 153 HAGYRCEESRNLR---DQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR---CNT 206
H +C+ R D + + K CP C +E+ GC+ ++CR C
Sbjct: 288 HDPVKCKWLRKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHMVCRNQNCKA 345
Query: 207 RFCYEC 212
FC+ C
Sbjct: 346 EFCWVC 351
>sp|P36113|YKZ7_YEAST RING finger protein YKR017C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKR017C PE=1 SV=1
Length = 551
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 28/223 (12%)
Query: 7 KKPNEY---LEKGGGGSSFTCEICIEPMAASKKFKNRNLCTHPFCQDCIARYIQVKVQDD 63
KK N+Y + + FTC IC + ++ F C H +C +C YI+ K+ +
Sbjct: 159 KKDNDYNSHFREVEFKNDFTCIICCDK-KDTETFALE--CGHEYCINCYRHYIKDKLHEG 215
Query: 64 NTAKIDCPGLDCKHNLDPFACEPVIPASLFSKWCDVLCEDYVLGFERSY--CPNTNCMAL 121
N I C +DC L + V+ SK D + +V R+Y CP +C ++
Sbjct: 216 NI--ITC--MDCSLALKNEDIDKVMGHPSSSKLMDSSIKSFVQKHNRNYKWCPFADCKSI 271
Query: 122 V-------VNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEES----RNLRDQNDI 170
V + E R +C N FCF C + H+ C+ + + R +++I
Sbjct: 272 VHLRDTSSLPEYTRLHYSPFVKC-NSFHRFCFNCGFEVHSPADCKITTAWVKKARKESEI 330
Query: 171 VFGQLVERMKWARCPACGHCVERKDGCSVVMC-RCNTRFCYEC 212
+ L CP C +E+ GC+ ++C C FC+ C
Sbjct: 331 LNWVLSHT---KECPKCSVNIEKNGGCNHMVCSSCKYEFCWIC 370
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 29/186 (15%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAK-IDCPGLDCKHNLDPFACEPVIPASLFS-KWCDVL 100
C H FC C + Y+ K+ ++ + I CP C +D +I S K+ ++
Sbjct: 201 CGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 260
Query: 101 CEDYVL-GFERSYCPNTNCMALVVNECERSGKVKKTQCPN-------CKQWFCFQCKLKW 152
+V +CP +C +V K Q P+ C + FCF C W
Sbjct: 261 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 309
Query: 153 HAGYRCEESRNLR---DQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR---CNT 206
H +C+ + D + + K CP C +E+ GC+ ++CR C
Sbjct: 310 HDPVKCKWLKKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHMVCRNQNCKA 367
Query: 207 RFCYEC 212
FC+ C
Sbjct: 368 EFCWVC 373
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 29/186 (15%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAK-IDCPGLDCKHNLDPFACEPVIPASLFS-KWCDVL 100
C H FC C + Y+ K+ ++ + I CP C +D +I S K+ ++
Sbjct: 201 CGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 260
Query: 101 CEDYVL-GFERSYCPNTNCMALVVNECERSGKVKKTQCPN-------CKQWFCFQCKLKW 152
+V +CP +C +V K Q P+ C + FCF C W
Sbjct: 261 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 309
Query: 153 HAGYRCEESRNLR---DQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR---CNT 206
H +C+ + D + + K CP C +E+ GC+ ++CR C
Sbjct: 310 HDPVKCKWLKKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHMVCRNQNCKA 367
Query: 207 RFCYEC 212
FC+ C
Sbjct: 368 EFCWVC 373
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 29/186 (15%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAK-IDCPGLDCKHNLDPFACEPVIPASLFS-KWCDVL 100
C H FC C + Y+ K+ ++ + I CP C +D +I S K+ ++
Sbjct: 203 CGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 262
Query: 101 CEDYVL-GFERSYCPNTNCMALVVNECERSGKVKKTQCPN-------CKQWFCFQCKLKW 152
+V +CP +C +V K Q P+ C + FCF C W
Sbjct: 263 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 311
Query: 153 HAGYRCEESRNLR---DQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR---CNT 206
H +C+ + D + + K CP C +E+ GC+ ++CR C
Sbjct: 312 HDPVKCKWLKKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHMVCRNQNCKA 369
Query: 207 RFCYEC 212
FC+ C
Sbjct: 370 EFCWVC 375
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 87/226 (38%), Gaps = 32/226 (14%)
Query: 9 PNEYLEKGGGGSSF-----------TCEICIE----PMAASKKFKNRNLCTHPFCQDCIA 53
P E L+K G G S TCEIC + P +++ C H FC C
Sbjct: 105 PEESLQKAGVGLSGSKQREVVHHEGTCEICYDEGCLPFFSAE-------CDHEFCLACYR 157
Query: 54 RYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIPASLFSKWCDVLCEDYVLGFER-SY 112
+Y+ ++ + + I CP C + + V+ ++ +L +V + +
Sbjct: 158 QYLDSRISEGESV-IQCPEESCTQIVSIQSITKVLDEKSLDRYHRLLDRSFVDDNDHLRW 216
Query: 113 CPNTNCMALV---VNECERSGKVKKTQCPNCKQWFCFQCKLKWHAGYRCEESRNLRD--Q 167
CP +C + V + S V C NC + FCF C H C + Q
Sbjct: 217 CPAPDCEFAIECHVTQASLSSVVPTVTC-NCGKQFCFGCGHDNHQPTICPLVKIWLQKCQ 275
Query: 168 NDIVFGQLVERMKWARCPACGHCVERKDGCSVVMC-RCNTRFCYEC 212
+D + CP C +E+ GC+ + C +C FC+ C
Sbjct: 276 DDSETANWI-HANTKECPKCSTTIEKNGGCNHMTCKKCKYEFCWVC 320
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 29/186 (15%)
Query: 43 CTHPFCQDCIARYIQVKVQDDNTAK-IDCPGLDCKHNLDPFACEPVIPASLFS-KWCDVL 100
C H FC C + Y+ K+ ++ + I CP C +D +I S K+ ++
Sbjct: 175 CGHKFCMQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 234
Query: 101 CEDYVL-GFERSYCPNTNCMALVVNECERSGKVKKTQCPN-------CKQWFCFQCKLKW 152
+V +CP +C +V K Q P+ C + FCF C W
Sbjct: 235 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 283
Query: 153 HAGYRCEESRNLR---DQNDIVFGQLVERMKWARCPACGHCVERKDGCSVVMCR---CNT 206
H +C+ + D + + K CP C +E+ GC+ ++CR C
Sbjct: 284 HDPVKCKWLKKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHMVCRNQNCKA 341
Query: 207 RFCYEC 212
FC+ C
Sbjct: 342 EFCWVC 347
>sp|Q84RQ8|ARI15_ARATH Probable E3 ubiquitin-protein ligase ARI15 OS=Arabidopsis thaliana
GN=ARI15 PE=2 SV=1
Length = 452
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 18/190 (9%)
Query: 42 LCTHPFCQDCIARYIQ---VKVQDDNTAKIDCPGLDCKHNLDPFACE--PVIPASLFSKW 96
C+H FC+ C ++Y++ V+ ++TA I CP DC+ + P E V +++ +
Sbjct: 53 FCSHKFCKACWSKYLKKNFFSVEKNHTA-ISCPDRDCRAAVGPETVEKLTVRDQAMYELY 111
Query: 97 CDVLCEDYVLGFERSYCPNTNCMALVVNECERSGKVKKTQCP-NCKQWFCFQCKLKWHAG 155
+ LG++ CP C ++ + C FC++C L+ H
Sbjct: 112 ILKSYREKYLGWKLKLCPARGCNYVIEFHLASEDEEHSLNIVCLCGHIFCWRCMLESHRP 171
Query: 156 YRCEESRNLRDQNDIVFGQLVER---MKW--ARCPACGHC---VE---RKDGCSVVMCRC 204
C + + ++ + V++ + W A C HC VE + + C C
Sbjct: 172 VTCNNASDWLSRDLEKLIEEVDKPSTVSWIDANTKPCPHCFIPVEIDGERPWAQFLTCVC 231
Query: 205 NTRFCYECGR 214
+ RFC++C R
Sbjct: 232 SGRFCWKCFR 241
>sp|P50636|RN19A_MOUSE E3 ubiquitin-protein ligase RNF19A OS=Mus musculus GN=Rnf19a PE=1
SV=2
Length = 840
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 36 KFKNRNLCTHPFCQDCIARYIQVKVQDDNTAKIDCPGLDCKHNLDPFACEPVIPAS-LFS 94
+F + C H C DC+ +Y+++++ + + I CP +C +P ++ L
Sbjct: 143 RFPDIMTCHHRSCVDCLRQYLRIEISE-SRVNISCP--ECTERFNPHDIRLILSDDVLME 199
Query: 95 KWCDVLCEDYVLGFER-SYCPNTNCMALVVN---------ECERSGKVKKTQCPNCKQWF 144
K+ + + +++ +CP +C V+ C R G C F
Sbjct: 200 KYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREG---------CGTEF 250
Query: 145 CFQCKLKWHAGYRCEESRNLRDQN-------------DIVFGQLVERMKWARCPAC-GHC 190
C+ CK WH C+ +R R Q+ G + +K CP C +
Sbjct: 251 CYHCKQIWHPNQTCDAARQERAQSLRLRTIRSSSISYSQESGAAADDIK--PCPRCAAYI 308
Query: 191 VERKDG-CSVVMCR-CNTRFCYECGRKIS 217
++ DG C+ + C C FC+ C ++IS
Sbjct: 309 IKMNDGSCNHMTCAVCGCEFCWLCMKEIS 337
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.481
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,551,914
Number of Sequences: 539616
Number of extensions: 4090039
Number of successful extensions: 13670
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 13329
Number of HSP's gapped (non-prelim): 264
length of query: 263
length of database: 191,569,459
effective HSP length: 115
effective length of query: 148
effective length of database: 129,513,619
effective search space: 19168015612
effective search space used: 19168015612
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)