Query 024717
Match_columns 263
No_of_seqs 146 out of 186
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 06:49:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024717.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024717hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4332 Predicted sugar transp 100.0 4.3E-66 9.2E-71 468.2 19.6 256 3-261 174-445 (454)
2 PF05631 DUF791: Protein of un 100.0 4.6E-42 9.9E-47 321.3 15.6 156 1-159 167-328 (354)
3 TIGR00900 2A0121 H+ Antiporter 99.3 1.9E-09 4.1E-14 97.2 21.8 204 4-213 136-350 (365)
4 PRK15403 multidrug efflux syst 99.2 8.6E-09 1.9E-13 98.0 23.9 240 7-259 151-404 (413)
5 PRK10489 enterobactin exporter 99.2 1.6E-08 3.6E-13 95.2 24.7 243 5-257 155-407 (417)
6 PF05977 MFS_3: Transmembrane 99.1 1.6E-08 3.4E-13 100.4 23.6 230 7-245 150-389 (524)
7 PRK11646 multidrug resistance 99.1 2.5E-08 5.4E-13 94.4 22.2 201 5-213 144-346 (400)
8 PRK15402 multidrug efflux syst 99.1 8.4E-08 1.8E-12 89.9 25.6 195 10-212 151-356 (406)
9 PRK09874 drug efflux system pr 99.1 7.9E-08 1.7E-12 89.2 23.8 243 8-258 154-406 (408)
10 PRK11043 putative transporter; 99.1 2E-07 4.4E-12 87.0 26.1 196 8-212 142-343 (401)
11 TIGR00902 2A0127 phenyl propri 99.0 3.1E-07 6.7E-12 85.9 25.9 192 4-206 136-334 (382)
12 TIGR00901 2A0125 AmpG-related 99.0 3.7E-08 8.1E-13 90.4 19.1 197 8-208 131-353 (356)
13 TIGR00893 2A0114 d-galactonate 99.0 2.3E-07 5.1E-12 83.6 23.9 201 5-213 127-360 (399)
14 PRK11551 putative 3-hydroxyphe 99.0 1.7E-07 3.7E-12 87.4 23.7 198 7-212 150-356 (406)
15 TIGR00899 2A0120 sugar efflux 99.0 1.4E-07 3.1E-12 86.2 22.0 199 5-212 134-335 (375)
16 PRK11195 lysophospholipid tran 99.0 3.9E-07 8.4E-12 86.0 24.7 235 5-250 133-380 (393)
17 TIGR00890 2A0111 Oxalate/Forma 98.9 1.2E-07 2.7E-12 85.6 19.5 199 9-213 139-344 (377)
18 PRK05122 major facilitator sup 98.9 5.2E-07 1.1E-11 84.1 24.1 187 9-212 161-350 (399)
19 PF07690 MFS_1: Major Facilita 98.9 4.7E-08 1E-12 87.9 16.3 202 4-212 129-347 (352)
20 PRK11128 putative 3-phenylprop 98.9 1.1E-06 2.3E-11 82.2 25.7 195 4-206 136-334 (382)
21 TIGR02718 sider_RhtX_FptX side 98.9 5.4E-07 1.2E-11 84.1 23.6 198 9-213 146-353 (390)
22 PRK11652 emrD multidrug resist 98.9 1.3E-06 2.9E-11 81.4 24.5 196 10-213 146-347 (394)
23 TIGR00710 efflux_Bcr_CflA drug 98.9 2.1E-06 4.5E-11 78.6 25.3 197 6-210 139-345 (385)
24 PRK11102 bicyclomycin/multidru 98.9 1.9E-06 4.1E-11 79.3 24.3 194 6-207 125-329 (377)
25 PRK09705 cynX putative cyanate 98.8 1.1E-06 2.4E-11 82.8 22.7 194 9-213 145-342 (393)
26 PRK11902 ampG muropeptide tran 98.8 2.6E-06 5.5E-11 80.1 25.0 195 5-205 139-344 (402)
27 PRK11010 ampG muropeptide tran 98.8 1.8E-06 4E-11 84.3 24.9 201 5-212 152-364 (491)
28 PRK06814 acylglycerophosphoeth 98.8 5.1E-07 1.1E-11 95.9 22.5 200 5-212 153-382 (1140)
29 PRK03699 putative transporter; 98.8 1.1E-06 2.5E-11 82.3 22.3 193 9-210 144-339 (394)
30 TIGR00903 2A0129 major facilit 98.8 1.4E-06 2.9E-11 82.3 22.8 201 4-212 122-328 (368)
31 TIGR00895 2A0115 benzoate tran 98.8 1.1E-06 2.5E-11 80.0 21.6 199 5-212 150-386 (398)
32 PRK08633 2-acyl-glycerophospho 98.8 2E-06 4.4E-11 90.7 25.9 201 5-213 148-371 (1146)
33 PRK03545 putative arabinose tr 98.8 4.6E-06 9.9E-11 77.9 25.6 198 5-213 142-342 (390)
34 cd06174 MFS The Major Facilita 98.8 6.6E-07 1.4E-11 79.7 19.1 182 5-215 132-316 (352)
35 PRK10406 alpha-ketoglutarate t 98.8 2.2E-06 4.8E-11 81.6 22.6 180 26-210 195-382 (432)
36 PRK12382 putative transporter; 98.8 3.4E-06 7.3E-11 78.6 23.2 190 8-212 160-350 (392)
37 PRK10213 nepI ribonucleoside t 98.8 9E-06 2E-10 76.8 26.1 190 5-205 153-345 (394)
38 PRK11663 regulatory protein Uh 98.8 2.8E-06 6.2E-11 81.0 22.7 200 6-214 157-387 (434)
39 PRK11273 glpT sn-glycerol-3-ph 98.7 2.9E-06 6.2E-11 81.4 22.6 186 26-212 184-395 (452)
40 TIGR00897 2A0118 polyol permea 98.7 1.2E-05 2.6E-10 75.7 25.6 195 10-213 156-363 (402)
41 PRK10091 MFS transport protein 98.7 1E-05 2.2E-10 75.5 24.5 235 10-255 141-381 (382)
42 PRK03633 putative MFS family t 98.7 6.7E-06 1.4E-10 76.7 22.8 189 8-211 142-332 (381)
43 TIGR00889 2A0110 nucleoside tr 98.7 9.6E-06 2.1E-10 77.5 23.4 194 7-207 141-351 (418)
44 TIGR00894 2A0114euk Na(+)-depe 98.7 1.1E-05 2.4E-10 77.2 23.7 204 5-212 176-408 (465)
45 PRK10054 putative transporter; 98.7 3.4E-06 7.3E-11 79.7 20.0 191 7-205 143-339 (395)
46 PRK15011 sugar efflux transpor 98.7 7.7E-06 1.7E-10 76.8 22.1 195 6-212 153-352 (393)
47 TIGR00879 SP MFS transporter, 98.7 1.7E-06 3.7E-11 80.4 17.3 137 73-212 283-431 (481)
48 PRK10473 multidrug efflux syst 98.7 2.7E-05 5.9E-10 72.5 25.3 187 8-204 139-330 (392)
49 TIGR00792 gph sugar (Glycoside 98.6 2.9E-05 6.3E-10 73.0 25.5 182 26-211 170-365 (437)
50 PRK15075 citrate-proton sympor 98.6 7.5E-06 1.6E-10 78.0 21.6 177 26-206 188-373 (434)
51 TIGR00891 2A0112 putative sial 98.6 3.8E-06 8.1E-11 77.1 18.9 202 5-212 145-376 (405)
52 COG2814 AraJ Arabinose efflux 98.6 2E-05 4.4E-10 75.8 24.2 203 6-220 147-355 (394)
53 PRK09556 uhpT sugar phosphate 98.6 1.5E-05 3.2E-10 76.8 23.4 201 6-211 168-396 (467)
54 TIGR00883 2A0106 metabolite-pr 98.6 4.7E-06 1E-10 75.7 18.5 175 26-205 167-353 (394)
55 PRK09528 lacY galactoside perm 98.6 5.7E-06 1.2E-10 78.1 19.7 189 6-204 151-355 (420)
56 TIGR00881 2A0104 phosphoglycer 98.6 1.3E-05 2.9E-10 72.4 19.9 194 14-212 138-358 (379)
57 PRK14995 methyl viologen resis 98.5 9.5E-06 2.1E-10 79.0 19.8 201 5-212 140-399 (495)
58 TIGR00886 2A0108 nitrite extru 98.5 6.3E-06 1.4E-10 75.2 17.3 138 65-207 217-360 (366)
59 TIGR00711 efflux_EmrB drug res 98.5 1.7E-05 3.7E-10 75.5 20.2 200 6-212 136-396 (485)
60 PRK10133 L-fucose transporter; 98.5 6.4E-05 1.4E-09 72.4 23.2 164 27-196 207-379 (438)
61 PRK10642 proline/glycine betai 98.4 7.1E-05 1.5E-09 72.7 23.0 178 26-207 189-386 (490)
62 PRK12307 putative sialic acid 98.4 3.7E-05 8E-10 72.2 19.2 197 7-213 153-370 (426)
63 PRK09952 shikimate transporter 98.4 0.00019 4E-09 68.8 24.2 174 26-204 196-383 (438)
64 TIGR01272 gluP glucose/galacto 98.4 1.9E-05 4E-10 72.9 16.6 188 3-196 53-262 (310)
65 TIGR00898 2A0119 cation transp 98.4 9.8E-05 2.1E-09 71.2 21.7 139 66-212 316-458 (505)
66 TIGR00892 2A0113 monocarboxyla 98.4 7.3E-05 1.6E-09 72.1 20.7 200 7-212 154-381 (455)
67 TIGR00882 2A0105 oligosacchari 98.4 5.6E-05 1.2E-09 70.7 19.4 189 10-211 147-355 (396)
68 TIGR00896 CynX cyanate transpo 98.3 6.4E-05 1.4E-09 69.0 19.1 194 10-211 136-333 (355)
69 PRK10054 putative transporter; 98.3 7.4E-05 1.6E-09 70.6 18.6 140 73-216 7-148 (395)
70 TIGR00712 glpT glycerol-3-phos 98.3 0.00025 5.4E-09 67.6 22.4 182 26-212 182-393 (438)
71 PRK10504 putative transporter; 98.3 0.00031 6.8E-09 67.1 22.5 198 8-212 146-401 (471)
72 PRK03893 putative sialic acid 98.2 0.00023 4.9E-09 68.3 20.8 114 95-212 296-414 (496)
73 PF07690 MFS_1: Major Facilita 98.2 0.00011 2.5E-09 65.9 17.5 111 103-217 28-138 (352)
74 TIGR02332 HpaX 4-hydroxyphenyl 98.2 0.00019 4.2E-09 68.1 19.8 199 6-212 142-381 (412)
75 PRK03545 putative arabinose tr 98.1 0.00018 3.9E-09 67.1 17.1 137 74-215 10-148 (390)
76 PF01306 LacY_symp: LacY proto 98.1 0.00087 1.9E-08 65.1 22.1 243 4-258 146-409 (412)
77 TIGR01299 synapt_SV2 synaptic 98.1 0.00046 1E-08 71.5 21.4 98 115-216 603-700 (742)
78 TIGR00710 efflux_Bcr_CflA drug 98.1 0.00024 5.1E-09 65.0 17.3 115 97-215 28-144 (385)
79 TIGR00788 fbt folate/biopterin 98.1 0.00025 5.5E-09 69.0 18.4 246 7-261 169-457 (468)
80 TIGR00885 fucP L-fucose:H+ sym 98.1 0.00053 1.2E-08 65.5 20.0 171 26-203 183-360 (410)
81 PLN00028 nitrate transmembrane 98.1 0.00062 1.3E-08 66.1 20.2 180 26-212 195-395 (476)
82 PRK10489 enterobactin exporter 98.1 0.00014 3.1E-09 68.4 15.2 145 65-214 9-160 (417)
83 PRK11195 lysophospholipid tran 98.0 0.0003 6.4E-09 66.4 16.8 134 74-216 4-140 (393)
84 TIGR00712 glpT glycerol-3-phos 98.0 0.00044 9.5E-09 66.0 18.0 133 76-212 30-166 (438)
85 TIGR00900 2A0121 H+ Antiporter 98.0 0.00062 1.3E-08 61.3 17.8 109 103-214 30-142 (365)
86 PRK11646 multidrug resistance 98.0 0.00066 1.4E-08 64.2 18.0 138 73-216 11-151 (400)
87 TIGR00897 2A0118 polyol permea 98.0 0.00074 1.6E-08 63.6 18.2 135 73-212 13-153 (402)
88 PRK10077 xylE D-xylose transpo 98.0 0.0023 5E-08 60.9 21.7 119 92-213 289-413 (479)
89 PRK10504 putative transporter; 98.0 0.00055 1.2E-08 65.4 17.3 135 74-213 11-147 (471)
90 TIGR00895 2A0115 benzoate tran 97.9 0.0003 6.5E-09 64.1 14.4 136 74-213 17-154 (398)
91 PRK11663 regulatory protein Uh 97.9 0.0012 2.5E-08 63.1 19.0 115 95-213 44-160 (434)
92 PRK09848 glucuronide transport 97.9 0.0072 1.6E-07 57.7 24.4 145 63-211 218-373 (448)
93 PF13347 MFS_2: MFS/sugar tran 97.9 0.0011 2.3E-08 63.1 18.5 181 27-211 175-369 (428)
94 PRK11551 putative 3-hydroxyphe 97.9 0.00095 2E-08 62.2 17.4 134 75-212 16-151 (406)
95 TIGR00924 yjdL_sub1_fam amino 97.9 0.00045 9.7E-09 67.4 15.7 146 70-218 6-159 (475)
96 PRK11273 glpT sn-glycerol-3-ph 97.9 0.0023 4.9E-08 61.4 20.1 115 95-212 50-168 (452)
97 TIGR00891 2A0112 putative sial 97.9 0.0017 3.7E-08 59.5 18.1 111 98-212 36-148 (405)
98 PRK10213 nepI ribonucleoside t 97.8 0.0032 6.9E-08 59.5 20.2 104 104-215 52-159 (394)
99 TIGR00893 2A0114 d-galactonate 97.8 0.00047 1E-08 62.1 14.0 109 103-215 25-133 (399)
100 PRK10473 multidrug efflux syst 97.8 0.0021 4.6E-08 59.8 18.1 112 97-212 26-139 (392)
101 PF03825 Nuc_H_symport: Nucleo 97.8 0.018 3.9E-07 55.4 24.9 156 65-227 199-366 (400)
102 PRK11102 bicyclomycin/multidru 97.8 0.001 2.2E-08 61.2 15.6 106 104-213 23-128 (377)
103 COG0738 FucP Fucose permease [ 97.7 0.0019 4.2E-08 62.5 16.9 189 3-198 147-358 (422)
104 PRK11652 emrD multidrug resist 97.7 0.0044 9.6E-08 57.7 18.8 137 72-212 6-144 (394)
105 PRK03699 putative transporter; 97.7 0.0038 8.1E-08 58.5 18.3 129 74-207 7-138 (394)
106 PRK03633 putative MFS family t 97.7 0.0035 7.7E-08 58.3 17.6 140 72-216 5-146 (381)
107 PRK05122 major facilitator sup 97.7 0.0023 4.9E-08 59.6 16.1 138 72-212 14-160 (399)
108 PRK10091 MFS transport protein 97.7 0.0041 8.9E-08 58.0 17.9 135 72-211 2-138 (382)
109 TIGR00924 yjdL_sub1_fam amino 97.7 0.029 6.2E-07 54.8 24.4 105 105-211 310-428 (475)
110 TIGR00890 2A0111 Oxalate/Forma 97.7 0.0014 3.1E-08 59.0 14.4 131 76-212 6-138 (377)
111 TIGR00711 efflux_EmrB drug res 97.7 0.0028 6E-08 60.3 16.9 114 95-213 23-139 (485)
112 PRK09874 drug efflux system pr 97.7 0.0059 1.3E-07 56.6 18.5 126 83-213 23-155 (408)
113 PRK12382 putative transporter; 97.6 0.0058 1.3E-07 56.8 18.3 107 103-213 47-161 (392)
114 PRK12307 putative sialic acid 97.6 0.0023 4.9E-08 60.0 15.6 130 76-213 20-155 (426)
115 TIGR02332 HpaX 4-hydroxyphenyl 97.6 0.0053 1.2E-07 58.3 17.6 134 72-211 6-143 (412)
116 cd06174 MFS The Major Facilita 97.6 0.0038 8.2E-08 55.5 15.6 107 103-213 30-136 (352)
117 PRK09669 putative symporter Ya 97.6 0.039 8.5E-07 52.7 23.4 127 63-195 219-350 (444)
118 PRK15402 multidrug efflux syst 97.6 0.0079 1.7E-07 56.3 18.0 131 72-207 8-144 (406)
119 PRK08633 2-acyl-glycerophospho 97.5 0.0061 1.3E-07 64.7 18.0 107 107-216 47-155 (1146)
120 PRK09584 tppB putative tripept 97.5 0.011 2.5E-07 58.0 18.6 145 69-216 16-166 (500)
121 PRK09705 cynX putative cyanate 97.5 0.0083 1.8E-07 56.5 16.9 113 95-212 30-144 (393)
122 TIGR00880 2_A_01_02 Multidrug 97.5 0.0025 5.3E-08 49.0 11.1 101 111-215 2-102 (141)
123 TIGR00903 2A0129 major facilit 97.4 0.0084 1.8E-07 56.6 16.3 103 103-214 22-128 (368)
124 PRK06814 acylglycerophosphoeth 97.4 0.01 2.2E-07 63.3 18.3 149 69-220 7-164 (1140)
125 PRK09556 uhpT sugar phosphate 97.3 0.0038 8.3E-08 60.1 13.2 112 98-212 53-170 (467)
126 PRK09584 tppB putative tripept 97.3 0.079 1.7E-06 52.1 22.2 97 107-206 316-424 (500)
127 PRK03893 putative sialic acid 97.3 0.014 3E-07 56.0 16.5 113 96-212 42-156 (496)
128 PRK10429 melibiose:sodium symp 97.3 0.19 4.1E-06 48.6 25.5 129 63-195 221-355 (473)
129 TIGR00894 2A0114euk Na(+)-depe 97.3 0.0028 6.1E-08 60.6 11.5 105 105-212 74-179 (465)
130 PRK15462 dipeptide/tripeptide 97.3 0.019 4.2E-07 56.9 17.5 139 74-216 10-154 (493)
131 TIGR00881 2A0104 phosphoglycer 97.3 0.001 2.2E-08 60.0 8.0 112 97-212 18-131 (379)
132 PRK10207 dipeptide/tripeptide 97.3 0.019 4.1E-07 56.4 17.4 172 71-245 11-189 (489)
133 TIGR00886 2A0108 nitrite extru 97.3 0.019 4E-07 52.3 16.2 119 90-212 17-138 (366)
134 PRK11043 putative transporter; 97.2 0.03 6.6E-07 52.2 17.8 133 75-211 8-141 (401)
135 PRK10133 L-fucose transporter; 97.2 0.047 1E-06 52.6 19.1 113 96-211 48-164 (438)
136 PRK14995 methyl viologen resis 97.2 0.044 9.5E-07 53.4 18.8 116 97-218 29-149 (495)
137 TIGR00882 2A0105 oligosacchari 97.2 0.01 2.3E-07 55.4 13.7 76 72-150 1-78 (396)
138 PRK10077 xylE D-xylose transpo 97.2 0.017 3.7E-07 55.0 15.4 107 105-214 53-170 (479)
139 TIGR01299 synapt_SV2 synaptic 97.1 0.039 8.5E-07 57.4 18.5 128 80-211 173-302 (742)
140 KOG2532 Permease of the major 97.1 0.073 1.6E-06 52.5 19.4 236 4-246 172-441 (466)
141 TIGR00896 CynX cyanate transpo 97.0 0.034 7.3E-07 51.0 15.5 110 97-212 23-134 (355)
142 TIGR00879 SP MFS transporter, 97.0 0.024 5.2E-07 52.6 14.2 105 106-213 70-176 (481)
143 TIGR00898 2A0119 cation transp 97.0 0.027 5.9E-07 54.3 15.0 104 106-213 126-229 (505)
144 TIGR01301 GPH_sucrose GPH fami 96.9 0.26 5.7E-06 48.8 21.4 180 27-214 195-428 (477)
145 TIGR00899 2A0120 sugar efflux 96.9 0.075 1.6E-06 48.4 16.5 105 103-212 29-137 (375)
146 PRK10406 alpha-ketoglutarate t 96.9 0.098 2.1E-06 49.8 17.8 97 112-211 68-171 (432)
147 KOG2533 Permease of the major 96.8 0.069 1.5E-06 53.1 16.9 198 5-208 179-411 (495)
148 PRK10207 dipeptide/tripeptide 96.8 0.57 1.2E-05 46.1 22.9 47 166-212 381-427 (489)
149 PF11700 ATG22: Vacuole efflux 96.8 0.65 1.4E-05 45.9 25.5 143 65-212 273-428 (477)
150 KOG2532 Permease of the major 96.8 0.016 3.4E-07 57.2 11.6 132 106-244 72-211 (466)
151 PRK09528 lacY galactoside perm 96.7 0.031 6.6E-07 52.8 13.0 75 69-146 6-82 (420)
152 PLN00028 nitrate transmembrane 96.7 0.17 3.6E-06 49.2 18.0 131 73-211 35-170 (476)
153 COG2814 AraJ Arabinose efflux 96.6 0.14 3E-06 49.6 16.4 138 104-249 45-188 (394)
154 COG2271 UhpC Sugar phosphate p 96.6 0.22 4.7E-06 48.9 17.6 182 17-205 176-387 (448)
155 PF05977 MFS_3: Transmembrane 96.5 0.13 2.9E-06 51.3 16.6 134 76-213 15-152 (524)
156 TIGR00885 fucP L-fucose:H+ sym 96.5 0.28 6.1E-06 46.8 18.2 112 98-212 27-142 (410)
157 TIGR00887 2A0109 phosphate:H+ 96.4 0.54 1.2E-05 45.7 19.9 32 181-212 409-440 (502)
158 PRK15403 multidrug efflux syst 96.4 0.38 8.2E-06 45.7 17.9 129 83-216 22-156 (413)
159 PRK10642 proline/glycine betai 96.3 0.14 3E-06 49.8 15.0 133 73-208 15-162 (490)
160 PRK15034 nitrate/nitrite trans 96.3 0.082 1.8E-06 52.1 13.4 125 82-210 39-173 (462)
161 PRK15034 nitrate/nitrite trans 96.2 1.2 2.6E-05 44.0 20.9 154 34-195 216-376 (462)
162 PRK11462 putative transporter; 96.2 1.4 3E-05 42.8 25.5 127 63-195 218-349 (460)
163 PRK15011 sugar efflux transpor 96.2 0.66 1.4E-05 43.4 18.3 136 72-212 14-155 (393)
164 PF06609 TRI12: Fungal trichot 96.1 0.14 3E-06 52.2 14.2 168 27-204 267-445 (599)
165 TIGR00806 rfc RFC reduced fola 96.1 0.11 2.3E-06 51.9 13.1 99 105-212 59-162 (511)
166 TIGR00805 oat sodium-independe 96.1 0.12 2.6E-06 52.6 13.9 86 66-153 323-412 (633)
167 TIGR00892 2A0113 monocarboxyla 96.0 0.23 5.1E-06 47.9 14.9 104 103-211 50-154 (455)
168 PRK15075 citrate-proton sympor 96.0 0.49 1.1E-05 45.0 16.6 117 93-212 34-165 (434)
169 COG2211 MelB Na+/melibiose sym 95.7 2.4 5.2E-05 42.1 20.4 189 33-226 187-403 (467)
170 TIGR00887 2A0109 phosphate:H+ 95.5 0.46 1E-05 46.2 14.8 101 108-211 57-162 (502)
171 PTZ00207 hypothetical protein; 95.5 0.93 2E-05 46.2 17.3 132 75-212 29-167 (591)
172 TIGR00902 2A0127 phenyl propri 95.4 0.81 1.8E-05 42.7 15.5 104 103-212 35-140 (382)
173 PRK09952 shikimate transporter 95.3 0.46 9.9E-06 45.5 13.9 100 109-211 61-172 (438)
174 COG2223 NarK Nitrate/nitrite t 95.3 3.2 6.9E-05 40.6 20.5 178 12-196 155-346 (417)
175 TIGR00883 2A0106 metabolite-pr 95.2 0.39 8.5E-06 43.4 12.2 97 113-212 41-144 (394)
176 TIGR00901 2A0125 AmpG-related 95.2 1.3 2.9E-05 40.4 15.8 106 105-212 21-131 (356)
177 TIGR00805 oat sodium-independe 94.9 0.39 8.5E-06 48.9 12.7 150 64-216 22-224 (633)
178 KOG2816 Predicted transporter 94.9 2 4.3E-05 42.5 16.9 192 8-212 160-378 (463)
179 PRK11010 ampG muropeptide tran 94.0 6.6 0.00014 38.4 19.0 137 69-211 8-154 (491)
180 COG2271 UhpC Sugar phosphate p 94.0 0.4 8.6E-06 47.0 9.6 107 97-211 52-164 (448)
181 TIGR01301 GPH_sucrose GPH fami 93.9 5.6 0.00012 39.4 17.9 149 74-222 5-174 (477)
182 KOG1330 Sugar transporter/spin 93.6 0.052 1.1E-06 53.6 2.8 192 13-211 174-396 (493)
183 PRK11902 ampG muropeptide tran 93.3 7 0.00015 36.5 19.2 131 75-211 4-141 (402)
184 TIGR00889 2A0110 nucleoside tr 92.9 4.7 0.0001 38.4 15.0 123 78-204 7-140 (418)
185 COG2807 CynX Cyanate permease 92.6 6.1 0.00013 38.3 15.1 133 67-205 202-337 (395)
186 KOG1330 Sugar transporter/spin 92.5 0.27 5.8E-06 48.7 5.9 98 104-211 65-168 (493)
187 PRK11128 putative 3-phenylprop 92.1 5.8 0.00013 36.8 14.4 105 103-212 35-140 (382)
188 PF03825 Nuc_H_symport: Nucleo 90.8 8.6 0.00019 37.0 14.4 115 79-196 8-123 (400)
189 KOG3764 Vesicular amine transp 90.8 2.9 6.4E-05 41.0 11.0 111 14-132 214-331 (464)
190 KOG0254 Predicted transporter 90.5 5.8 0.00013 38.9 13.2 113 108-225 90-203 (513)
191 KOG2563 Permease of the major 89.5 9.7 0.00021 37.9 13.4 76 64-139 257-333 (480)
192 KOG0255 Synaptic vesicle trans 89.1 4.3 9.3E-05 39.5 10.9 99 105-211 116-218 (521)
193 TIGR00792 gph sugar (Glycoside 88.5 18 0.0004 33.7 14.5 108 104-211 32-147 (437)
194 PRK03612 spermidine synthase; 88.3 23 0.0005 35.5 15.6 112 77-197 25-143 (521)
195 KOG3764 Vesicular amine transp 86.5 5.8 0.00013 39.1 9.8 95 103-205 102-201 (464)
196 PF06813 Nodulin-like: Nodulin 85.8 23 0.0005 32.2 12.9 135 78-218 7-151 (250)
197 KOG2533 Permease of the major 85.8 4.2 9E-05 40.6 8.7 106 106-219 80-190 (495)
198 PF03092 BT1: BT1 family; Int 85.1 38 0.00083 32.7 18.0 195 7-216 135-370 (433)
199 PF00083 Sugar_tr: Sugar (and 84.4 0.096 2.1E-06 49.5 -3.4 98 107-211 46-149 (451)
200 COG2223 NarK Nitrate/nitrite t 80.0 11 0.00023 37.0 8.8 120 82-206 19-146 (417)
201 KOG3762 Predicted transporter 79.9 21 0.00045 36.5 10.9 137 64-208 362-503 (618)
202 KOG0569 Permease of the major 78.7 75 0.0016 31.8 15.6 104 107-218 60-170 (485)
203 PF01770 Folate_carrier: Reduc 78.1 72 0.0016 31.3 18.4 200 10-217 143-388 (412)
204 KOG2504 Monocarboxylate transp 75.1 94 0.002 31.1 19.9 137 67-207 292-431 (509)
205 TIGR02718 sider_RhtX_FptX side 74.3 73 0.0016 29.4 18.3 123 84-208 11-141 (390)
206 COG2270 Permeases of the major 70.5 1.2E+02 0.0025 30.1 15.8 137 64-207 243-384 (438)
207 KOG2325 Predicted transporter/ 69.8 31 0.00066 34.6 9.2 118 70-192 30-154 (488)
208 KOG2615 Permease of the major 68.8 31 0.00066 34.0 8.7 114 86-207 41-163 (451)
209 PRK09848 glucuronide transport 66.7 1.2E+02 0.0026 28.8 16.9 103 104-206 41-152 (448)
210 KOG2325 Predicted transporter/ 66.3 35 0.00075 34.2 8.8 177 28-212 207-436 (488)
211 PRK15462 dipeptide/tripeptide 57.9 2.1E+02 0.0045 28.6 19.1 41 7-50 149-189 (493)
212 TIGR00880 2_A_01_02 Multidrug 54.9 84 0.0018 23.2 12.6 105 4-131 6-111 (141)
213 PF05978 UNC-93: Ion channel r 54.0 1.3E+02 0.0029 25.2 11.0 93 108-211 42-136 (156)
214 KOG2615 Permease of the major 52.6 2.5E+02 0.0053 27.9 13.9 47 166-212 354-400 (451)
215 PF06963 FPN1: Ferroportin1 (F 52.2 1.6E+02 0.0035 28.9 10.6 125 83-212 264-404 (432)
216 COG0738 FucP Fucose permease [ 51.1 88 0.0019 30.8 8.4 102 103-207 44-147 (422)
217 PRK09669 putative symporter Ya 50.3 2.3E+02 0.0049 26.8 14.7 106 106-211 44-157 (444)
218 PF04226 Transgly_assoc: Trans 47.0 23 0.00051 23.9 2.8 40 8-50 3-43 (48)
219 PRK10457 hypothetical protein; 46.5 44 0.00096 25.3 4.5 42 7-48 4-45 (82)
220 PF07019 Rab5ip: Rab5-interact 44.9 77 0.0017 23.4 5.6 34 6-44 8-41 (81)
221 KOG0254 Predicted transporter 44.7 1.8E+02 0.0038 28.5 9.7 130 75-207 296-438 (513)
222 KOG2504 Monocarboxylate transp 44.1 1.2E+02 0.0027 30.2 8.6 117 80-205 53-175 (509)
223 PF00083 Sugar_tr: Sugar (and 41.9 0.07 1.5E-06 50.5 -14.2 180 26-212 168-397 (451)
224 PF10912 DUF2700: Protein of u 39.1 2.2E+02 0.0048 23.5 8.4 71 30-100 4-80 (143)
225 TIGR00926 2A1704 Peptide:H+ sy 36.8 5E+02 0.011 26.9 13.9 47 167-213 88-137 (654)
226 PF11712 Vma12: Endoplasmic re 34.5 71 0.0015 26.2 4.4 44 2-48 81-125 (142)
227 PF03778 DUF321: Protein of un 33.6 15 0.00032 20.7 0.1 7 49-55 3-9 (20)
228 PF01306 LacY_symp: LacY proto 30.8 5.2E+02 0.011 25.3 13.4 63 70-132 4-68 (412)
229 PF06779 DUF1228: Protein of u 30.7 1.6E+02 0.0034 22.4 5.4 66 93-161 8-78 (85)
230 KOG3626 Organic anion transpor 29.3 6.6E+02 0.014 26.7 11.3 85 66-156 385-477 (735)
231 PF00854 PTR2: POT family; In 29.2 4.6E+02 0.01 24.2 9.8 80 166-245 35-118 (372)
232 PRK10457 hypothetical protein; 27.5 1.7E+02 0.0036 22.1 5.0 18 5-22 32-49 (82)
233 PF04117 Mpv17_PMP22: Mpv17 / 25.3 1.3E+02 0.0028 21.2 3.9 36 178-213 27-62 (68)
234 COG0477 ProP Permeases of the 25.1 3.8E+02 0.0082 21.8 13.9 99 107-208 39-139 (338)
235 PTZ00207 hypothetical protein; 24.0 8E+02 0.017 25.2 14.7 102 12-131 77-179 (591)
236 TIGR02840 spore_YtaF putative 22.3 3.7E+02 0.008 23.5 7.0 48 4-54 39-87 (206)
237 PF15396 FAM60A: Protein Famil 21.2 59 0.0013 29.1 1.7 16 244-259 54-69 (213)
238 COG4035 Predicted membrane pro 21.1 1.2E+02 0.0025 23.9 3.1 33 91-123 48-81 (108)
239 COG2261 Predicted membrane pro 20.4 2.5E+02 0.0054 21.4 4.7 13 10-22 7-19 (82)
No 1
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-66 Score=468.15 Aligned_cols=256 Identities=27% Similarity=0.382 Sum_probs=218.7
Q ss_pred hhhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc--chhhH---HHHHHHhcChhHHH
Q 024717 3 FFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF--DDYRT---SFFTYIFGDKRIWL 77 (263)
Q Consensus 3 ~~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~--~~~~~---~~~~~i~~d~~il~ 77 (263)
|+|+++||+||+.+|.+||+. +.||++||+++++++.+|+.+++..|.|||||++ ++..+ .+.++|.+|+|+.+
T Consensus 174 fgNglvAiiaGlfgn~lvd~~-slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~gaa~aiaSD~ki~L 252 (454)
T KOG4332|consen 174 FGNGLVAIIAGLFGNLLVDTF-SLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGAARAIASDEKIAL 252 (454)
T ss_pred hhccHHHHHHHHHHHHHHHHh-ccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHhHHHHhcchHHHH
Confidence 689999999999999999997 8999999999999999999999999999999953 44443 45889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh
Q 024717 78 LVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII 157 (263)
Q Consensus 78 lg~~qslfEgsmy~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~ 157 (263)
+|.+|++||++||+|||+|||+|.+++++.|||.||++||++.|+||++++++.++ ++.+.|+.++++|+++..++..|
T Consensus 253 LG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~-s~~~ve~ymqivf~vs~a~l~Lp 331 (454)
T KOG4332|consen 253 LGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSR-SSPKVESYMQIVFLVSIAALLLP 331 (454)
T ss_pred HHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhc-CCcccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888999999999999999999999999888875 56788999999999999888888
Q ss_pred hc-----cchhhH-HHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHHHHhhhhccccchhHH
Q 024717 158 AY-----DYQEIG-ILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAM 231 (263)
Q Consensus 158 ~~-----~~~~~~-~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l~~g~~~~~~~~~~~ 231 (263)
.. |.++.+ -++.+||+||+|||+|||+|+.||+||||||.|+|+||+||+|||++||++|+.- +.......+.
T Consensus 332 ilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynl-h~~~~p~~tr 410 (454)
T KOG4332|consen 332 ILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL-HVDAFPTTTR 410 (454)
T ss_pred HHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec-ccccCccccc
Confidence 53 334332 3799999999999999999999999999999999999999999999999999840 0000112334
Q ss_pred HHHHHHHHHHHHHHHH--HHH---HhcCCCCcccc
Q 024717 232 VAFAALGLFIAAGCMH--VLK---RWGKQPYQNWH 261 (263)
Q Consensus 232 ~~~~~~~l~l~~~~~~--~~~---~~~~~~~~~~~ 261 (263)
.+|++|+.++.++.++ .+- |++|.-+++|.
T Consensus 411 ~mf~icS~~~~~a~i~~~~L~~v~e~d~~~~~~~~ 445 (454)
T KOG4332|consen 411 NMFGICSAFLFVASILQRRLMTVVEHDKERRVPWS 445 (454)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhhhccHhhcCCCC
Confidence 6888999888887544 332 55555556663
No 2
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=4.6e-42 Score=321.32 Aligned_cols=156 Identities=35% Similarity=0.467 Sum_probs=142.7
Q ss_pred Cc-hhhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCC--cch---hhHHHHHHHhcChh
Q 024717 1 MT-FFESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA--FDD---YRTSFFTYIFGDKR 74 (263)
Q Consensus 1 mt-~~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~--~~~---~~~~~~~~i~~d~~ 74 (263)
|| +.|+++||+||++||+++|+. +.|+++||++|++++++++++|..+|+||||++ +++ ..++.++.|.+|||
T Consensus 167 ~tf~~n~~vAI~aGv~a~~l~~~~-~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~r 245 (354)
T PF05631_consen 167 ATFFGNGVVAIGAGVVANVLADWF-GFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPR 245 (354)
T ss_pred HHHHHhHHHHHHHhHHHHHHHHHh-CCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCch
Confidence 56 569999999999999999987 788999999999999999999999999999983 222 22356889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHH
Q 024717 75 IWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVF 154 (263)
Q Consensus 75 il~lg~~qslfEgsmy~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l 154 (263)
++.+|++|+|||++||+|||+|||+|+++++++|+|+||+|||+|+|+||++|+++.++ +.++|+++..+++++++++
T Consensus 246 il~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~--~~~~e~~l~~v~~~aa~~l 323 (354)
T PF05631_consen 246 ILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSK--SLRPESLLRYVFAVAAVSL 323 (354)
T ss_pred hHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988899999999999999999999999988874 5899999999999999999
Q ss_pred HHhhc
Q 024717 155 SIIAY 159 (263)
Q Consensus 155 ~~~~~ 159 (263)
++|++
T Consensus 324 ~~pv~ 328 (354)
T PF05631_consen 324 AIPVV 328 (354)
T ss_pred HHHHH
Confidence 99964
No 3
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.25 E-value=1.9e-09 Score=97.20 Aligned_cols=204 Identities=14% Similarity=0.160 Sum_probs=140.7
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC-Ccch----h---hHHHHHHHhcChhH
Q 024717 4 FESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-AFDD----Y---RTSFFTYIFGDKRI 75 (263)
Q Consensus 4 ~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~~~----~---~~~~~~~i~~d~~i 75 (263)
.+++-.+++..+++++.+. .||+.+|....+..+++.++......|+..+ +.++ . .++.++.+.+||++
T Consensus 136 ~~~~g~~~g~~l~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (365)
T TIGR00900 136 VRSLFYIVGPGIGGLMYAT---LGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLL 212 (365)
T ss_pred HHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHH
Confidence 3455566777888888886 4899999998877777766665544443322 1111 1 12345668899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH
Q 024717 76 WLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF 152 (263)
Q Consensus 76 l~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~ 152 (263)
+.+.....++....+.....|.|.+.+ +.++...|++.+.+.++.++|+.+.+++.. +.+.++.+.....+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 213 RTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGR---YFKRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHH---HhchhHHHHHHHHHHHH
Confidence 988887777766665555578888765 335567899999999999999999987764 34455555554444444
Q ss_pred HHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 153 VFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 153 ~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
++........+....+...+++-++.|...|....+-.+.+|+|.|+++++++..--|+.-
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 350 (365)
T TIGR00900 290 AILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAW 350 (365)
T ss_pred HHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 4433322221223345566777777899999999999999999999999999888777653
No 4
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.19 E-value=8.6e-09 Score=98.01 Aligned_cols=240 Identities=11% Similarity=0.062 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcc--h--hhHHHHHHHhcChhHHHHHHHH
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFD--D--YRTSFFTYIFGDKRIWLLVLAQ 82 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~--~--~~~~~~~~i~~d~~il~lg~~q 82 (263)
+..+++.++++++.+. .||+.+|..-.++.+++.++....-+|+..++++ + ...+.++.+++||+++...+..
T Consensus 151 ~~~~~g~~lg~~l~~~---~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~ 227 (413)
T PRK15403 151 VAPIIGPLSGAALMHF---VHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATL 227 (413)
T ss_pred HHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHHHHHHHHH
Confidence 3455566777777775 5999999998888777776655434554322211 1 1234677889999999988888
Q ss_pred HHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHH---HHHHHHHHHH
Q 024717 83 ACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYA---FVVLGFVFSI 156 (263)
Q Consensus 83 slfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~---~~~~a~~l~~ 156 (263)
.+....++.|. .+.|.+.. +-++...|+++...+.+.++|+.+.+++.++ +.+ ++.+... ..+....+..
T Consensus 228 ~~~~~~~~~~~-~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~--~~~-~~~~~~~~~~~~ig~~l~~~ 303 (413)
T PRK15403 228 SLSYIPMMSWV-AVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKD--PTE-PRFIWRAVPIQLVGLALLIV 303 (413)
T ss_pred HHHHHHHHHHH-HhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCc-hhHHHHHHHHHHHHHHHHHH
Confidence 88777776654 46786655 3356678999999999999999998887653 222 2222111 1111111111
Q ss_pred h--hccchhhHHHHHHHHHHHHHhHhHhhHHH--HHHHhcCCCchhHHHHHHhHHHHHHHHHHHHHhhhhccccchhHHH
Q 024717 157 I--AYDYQEIGILVALFCLFHACVGLILPSLA--RLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNIENAAMV 232 (263)
Q Consensus 157 ~--~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~--~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l~~g~~~~~~~~~~~~ 232 (263)
. ..++ .....+.+.+++-++.|+..|... .++....| |+++.+.++...+...-..-..++|..+.+.. .
T Consensus 304 ~~~~~~~-~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~---~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~--~ 377 (413)
T PRK15403 304 GNLLWPH-VWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLP---KGTVSASLNMVILMVMAVSVEIGRWLWFNGGR--L 377 (413)
T ss_pred HHHHccc-cHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc--h
Confidence 1 0121 111235677778888899999998 55555555 56666665554444432222223333222222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcc
Q 024717 233 AFAALGLFIAAGCMHVLKRWGKQPYQN 259 (263)
Q Consensus 233 ~~~~~~l~l~~~~~~~~~~~~~~~~~~ 259 (263)
.+..+++++.......++|..|+|+|+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (413)
T PRK15403 378 PFHLLAVVAGVIVVFTLAGLLNRVRQH 404 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 233333333344445666777777654
No 5
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.17 E-value=1.6e-08 Score=95.16 Aligned_cols=243 Identities=16% Similarity=0.092 Sum_probs=141.9
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCC---cch--hhHHHHHHHhcChhHHHHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA---FDD--YRTSFFTYIFGDKRIWLLV 79 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~---~~~--~~~~~~~~i~~d~~il~lg 79 (263)
.++..+++..+++++.+. .||+.+|....+..+++.++... -+|...++ +.+ ..++.++.+.+||++..+-
T Consensus 155 ~~~g~~~g~~l~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (417)
T PRK10489 155 VRLGSVISPALGGLLIAA---GGVAWNYGLAAAGTFITLLPLLR-LPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIA 230 (417)
T ss_pred HhHHHHhHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHh-CCCCCCCCcccccchHHHHHHHHHHHcChHHHHHH
Confidence 344455667778888875 47888999888877777666554 33332211 111 1123466788998876665
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccC---CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHH
Q 024717 80 LAQACLQFSIALFWILWAPTLVAD---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI 156 (263)
Q Consensus 80 ~~qslfEgsmy~FVf~WTP~L~~~---~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~ 156 (263)
+.+.+.- . +.-+..|.|.+.++ .+....|++.+.+.++..+|+.+.+++.. +.++++.+...+.+.++.+..
T Consensus 231 ~~~~~~~-~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~---~~~~~~~l~~~~~~~~~~~~~ 305 (417)
T PRK10489 231 LLGGLLT-M-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAH---SARPGLLMLLSTLGSFLAVGL 305 (417)
T ss_pred HHHHHHH-H-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhh---ccCcchHHHHHHHHHHHHHHH
Confidence 5544332 1 22345577887663 23445899999999999999999887754 234445555555555544433
Q ss_pred hhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH-HHHHHhhhhccccch-hHHHHH
Q 024717 157 IAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI-LLFLLLRGFYRNIEN-AAMVAF 234 (263)
Q Consensus 157 ~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v-~~~l~~g~~~~~~~~-~~~~~~ 234 (263)
....+ +......+++++-...|...|....+..+++|+|.|+++++++..=.++-. +.....|...+..+. ......
T Consensus 306 ~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~ 384 (417)
T PRK10489 306 FGLMP-MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASAS 384 (417)
T ss_pred HHccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHH
Confidence 32222 222234455555556677778888899999999999999999887544422 222222322223332 333344
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC
Q 024717 235 AALGLFIAAGCMHVLKRWGKQPY 257 (263)
Q Consensus 235 ~~~~l~l~~~~~~~~~~~~~~~~ 257 (263)
+.+.++........+++.+++.+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~ 407 (417)
T PRK10489 385 GFGLLIIGVLLLLVLGELRRFRQ 407 (417)
T ss_pred HHHHHHHHHHHHHhccccccccc
Confidence 44444444444344445444433
No 6
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.13 E-value=1.6e-08 Score=100.41 Aligned_cols=230 Identities=17% Similarity=0.232 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc---ch---hhHHHHHHHhcChhHHHHHH
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF---DD---YRTSFFTYIFGDKRIWLLVL 80 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~---~~---~~~~~~~~i~~d~~il~lg~ 80 (263)
+.-+++-.+++.++... |..+.|.+-++.-++...++. .|+++..+++ ++ ..+++++.+.++|.+..+-.
T Consensus 150 iar~iGPalgG~Lva~~---G~~~~f~inalsfl~~i~~l~-~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~ 225 (524)
T PF05977_consen 150 IARIIGPALGGILVAFF---GAAAAFLINALSFLISILALL-RWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLL 225 (524)
T ss_pred HHHhccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH-HccccccccccchhhhhhhHHHHHHHHhcchHHHHHHH
Confidence 34455667888888864 888899988877777665554 4665543211 11 22356888899998877655
Q ss_pred HHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh
Q 024717 81 AQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII 157 (263)
Q Consensus 81 ~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~ 157 (263)
...+|-......+- =.|.+.+ +++..-+|++.+++-+...+|+.+.+++.. +++.++.+..+.+..+.++...
T Consensus 226 ~~~~~~l~~~a~~a-LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~---~~~~~~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 226 RSFLFNLFASAVWA-LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRR---RLSSRRLVLLASLLFALALLLL 301 (524)
T ss_pred HHHHHHHhhhHHHH-hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhc---ccCcchhhHHHHHHHHHHHHHH
Confidence 55555432222211 1477765 456778999999999999999999998764 4566666666666666555444
Q ss_pred hccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHH-HHHhhhhccccchhHHHHHHH
Q 024717 158 AYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILL-FLLLRGFYRNIENAAMVAFAA 236 (263)
Q Consensus 158 ~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~-~l~~g~~~~~~~~~~~~~~~~ 236 (263)
.... +......++++.=++..+....+.+.+.+.+|++.|++++++|+.=.+...-+ .+.-|...+..+-+..+..+.
T Consensus 302 al~~-~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~ 380 (524)
T PF05977_consen 302 ALSP-SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAG 380 (524)
T ss_pred hcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 3332 22334556666666777788888899999999999999999999877776433 333343333344455555554
Q ss_pred HHHHHHHHH
Q 024717 237 LGLFIAAGC 245 (263)
Q Consensus 237 ~~l~l~~~~ 245 (263)
+.+++....
T Consensus 381 ~~lll~~~~ 389 (524)
T PF05977_consen 381 AALLLSALI 389 (524)
T ss_pred HHHHHHHHH
Confidence 444444433
No 7
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.10 E-value=2.5e-08 Score=94.35 Aligned_cols=201 Identities=17% Similarity=0.183 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQAC 84 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qsl 84 (263)
+.+-.+++..+++++.+ .||+.+|.+..+..++..++....-+|..-++..+..++.++.+.+||+.+........
T Consensus 144 ~~~g~~ig~~l~g~l~~----~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
T PRK11646 144 DSAGAVIGALLGSWLLQ----YDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTVRTPVREGMTRVLRDKRFVTYVLTLTG 219 (400)
T ss_pred HHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHhCCcccccccchhhHHHHHHHHcCchHHHHHHHHHH
Confidence 34445556677888873 38899999988777766655444334421111112233467778899998776555444
Q ss_pred HHHHHHHHHHhhhhhhccC--CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccch
Q 024717 85 LQFSIALFWILWAPTLVAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQ 162 (263)
Q Consensus 85 fEgsmy~FVf~WTP~L~~~--~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~ 162 (263)
+- ..+..+..|.|.+.++ ..+...|++++...+....+.....+... ++.+.++.+...+++.++.+......+
T Consensus 220 ~~-~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~~~~~~~~l~~~~- 295 (400)
T PRK11646 220 YY-MLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSE--KRFRLEHRLMAGLLIMSLSMFPIGMVS- 295 (400)
T ss_pred HH-HHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHH--HhcchhHHHHHHHHHHHHHHHHHHHhh-
Confidence 32 2222344678887653 34455788877766655555444455443 234445544444444443332221111
Q ss_pred hhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 163 EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 163 ~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
+........+++=.+.|+..|...++-.+.+|+++|++++++++...++.-
T Consensus 296 ~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 346 (400)
T PRK11646 296 NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGG 346 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHH
Confidence 112223333445566688999999999999999999999999999888764
No 8
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.10 E-value=8.4e-08 Score=89.89 Aligned_cols=195 Identities=14% Similarity=0.131 Sum_probs=123.0
Q ss_pred HHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcch----hhHHHHHHHhcChhHHHHHHHHHHH
Q 024717 10 IGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDD----YRTSFFTYIFGDKRIWLLVLAQACL 85 (263)
Q Consensus 10 I~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~----~~~~~~~~i~~d~~il~lg~~qslf 85 (263)
+++..+++++.+. .||+.+|....++.+++.+.+....+|...+++++ ...+.++.+++||+++.+.+...+.
T Consensus 151 ~~g~~i~~~l~~~---~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (406)
T PRK15402 151 LLGPLVGAALIHV---LPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLV 227 (406)
T ss_pred HHHHHHHHHHHHc---cCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4555666777775 48999999877777777776665566654332111 1224567789999999888777666
Q ss_pred HHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhh----
Q 024717 86 QFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA---- 158 (263)
Q Consensus 86 Egsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~---- 158 (263)
....+.+ ..+.|.+.. +-++...|+....+.++..+|+.+.+++.. |.+..+.+....++.++.+....
T Consensus 228 ~~~~~~~-~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~---r~~~~~~~~~~~~~~~~g~~~~~~~~~ 303 (406)
T PRK15402 228 SLPLLAW-IALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTS---RRPLRSLIRMGLWPMVAGLLLAALATV 303 (406)
T ss_pred HHHHHHH-HHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554433 344566533 334556788888888888999998888765 45555666555544432222221
Q ss_pred ccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 159 YDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 159 ~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.........+...+++-.+.|+.+|.+...- ...+|++|+++.+.+..=-+..
T Consensus 304 ~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~ 356 (406)
T PRK15402 304 ISSHAYLWLTAGLSLYAFGIGLANAGLYRLT-LFSSDVSKGTVSAAMGMLSMLI 356 (406)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhHHHHH-hhhccccccHHHHHHHHHHHHH
Confidence 1121222234556666677788888776654 4566789999998876554443
No 9
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.07 E-value=7.9e-08 Score=89.21 Aligned_cols=243 Identities=15% Similarity=0.082 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC-Ccc-hhhHHHHHHHhcChhHHHHHHH-HHH
Q 024717 8 ALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-AFD-DYRTSFFTYIFGDKRIWLLVLA-QAC 84 (263)
Q Consensus 8 ~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~~-~~~~~~~~~i~~d~~il~lg~~-qsl 84 (263)
..+++..+++.+.+. .||+.+|....++.+++.++.....+|+..+ +++ +...+......+||+.+..-.. ..+
T Consensus 154 g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (408)
T PRK09874 154 GALLGPLAGGLLADS---YGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLI 230 (408)
T ss_pred HHHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHhCcCCchHHHHHHHHHH
Confidence 345566677777775 4899999998888877777776666665422 111 1112233345678876553333 333
Q ss_pred HHHHHHHHHHhhhhhhccC--CC--CC--chHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhh
Q 024717 85 LQFSIALFWILWAPTLVAD--GR--EV--HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA 158 (263)
Q Consensus 85 fEgsmy~FVf~WTP~L~~~--~~--~~--plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~ 158 (263)
++. .+..+.-+.|.+..+ .+ +. -.|++.+.+-+..++++...+++.. |++.++.+.....+.++.+....
T Consensus 231 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~d---r~g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 231 IQV-ATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGD---RIGPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHH-HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccchhHHHHHHHHHHHHHHHH
Confidence 332 222233344444331 11 11 2466777777777788877777764 45555666555554443332221
Q ss_pred ccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHHHHh-hhhccccchhHHHHHHHH
Q 024717 159 YDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL-RGFYRNIENAAMVAFAAL 237 (263)
Q Consensus 159 ~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l~~-g~~~~~~~~~~~~~~~~~ 237 (263)
... +.........+.-++.|..+|.+..+-.+..|+++|+++++++..--++-..+.-.. |-..++.+-...+..+.+
T Consensus 307 ~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~ 385 (408)
T PRK09874 307 FVQ-TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAG 385 (408)
T ss_pred Hhc-cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHH
Confidence 111 211222333345556789999999999999999999999999888777654333222 322223333444554444
Q ss_pred HHHHHHHHHHHHHHhcCCCCc
Q 024717 238 GLFIAAGCMHVLKRWGKQPYQ 258 (263)
Q Consensus 238 ~l~l~~~~~~~~~~~~~~~~~ 258 (263)
..++++.......|.++++++
T Consensus 386 ~~l~~~~~~~~~~~~~~~~~~ 406 (408)
T PRK09874 386 VVLFNAVYSWNSLRRRRIPQV 406 (408)
T ss_pred HHHHHHHHHHHHHHHhcCccc
Confidence 444444333333344444443
No 10
>PRK11043 putative transporter; Provisional
Probab=99.05 E-value=2e-07 Score=87.04 Aligned_cols=196 Identities=15% Similarity=0.136 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHHHHH
Q 024717 8 ALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQF 87 (263)
Q Consensus 8 ~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qslfEg 87 (263)
..+++..+++++.+. .||+.+|.....+.++..++.....+|+. +++.+.++..++.+++||+.+...+...+..+
T Consensus 142 ~~~~g~~i~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (401)
T PRK11043 142 SPALAPLLGAWLLNH---FGWQAIFATLFAITLLLILPTLRLKPSKK-ARKQSQDALTFKQLLKSKTYLGNVLIFAACSA 217 (401)
T ss_pred HHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHcCCCCC-ccccchHHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 344666778888876 48999999887777777666655444433 22212233467788999998766665555555
Q ss_pred HHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH---HHHh-hccc
Q 024717 88 SIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV---FSII-AYDY 161 (263)
Q Consensus 88 smy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~---l~~~-~~~~ 161 (263)
..+.+. .|.|.+.+ +-++...|+++..+.++.++|+.+.+++.. |.+.++.+.......+++ +... ....
T Consensus 218 ~~~~~~-~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (401)
T PRK11043 218 AFFAWL-TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQ---KWGGEQLLPWLLVLFAVSVIAIWLASLLSH 293 (401)
T ss_pred HHHHHH-HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 555443 46666644 334455788888888899999988887764 455555443333222222 1111 1111
Q ss_pred hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 162 QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 162 ~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
......+..+++.-...|..+|.....-.+..|+ +|+++++++..--+..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~ 343 (401)
T PRK11043 294 PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGL 343 (401)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHH
Confidence 1222344567777788899999988877677775 7999999998744443
No 11
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.02 E-value=3.1e-07 Score=85.91 Aligned_cols=192 Identities=17% Similarity=0.063 Sum_probs=130.0
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccC-CCCCc--c-hhhHHHHHHHhcChhHHHHH
Q 024717 4 FESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTEN-PKMAF--D-DYRTSFFTYIFGDKRIWLLV 79 (263)
Q Consensus 4 ~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~EN-yg~~~--~-~~~~~~~~~i~~d~~il~lg 79 (263)
+.++-.+++..+++++.+.+ ||+..|.+...+.++..+.. ...+|+ ..+++ + +...+.+..++|||+.+.+.
T Consensus 136 ~~slG~~~g~~l~g~l~~~~---g~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 211 (382)
T TIGR00902 136 IGSAAFIIGSALFGGLIGMF---DEQNILAILTAGLAFMLIGF-LIKPTIPPKDAIPEDESQGDSAFIALLKNPMNLRFL 211 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHc---ChhHHHHHHHHHHHHHHHHH-HcCCCCCCCccccccccccchhHHHHHcChHHHHHH
Confidence 34555667778888998864 89999887765544333332 333432 21111 1 11123467889999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh
Q 024717 80 LAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII 157 (263)
Q Consensus 80 ~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~ 157 (263)
+...+..++.+.+.- |.|.+.+ +.++...|+.++...++.+++..+.+++.+ |+++++.+..+.+..+......
T Consensus 212 ~~~~l~~~~~~~~~~-~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~---r~g~~~~l~~~~~~~~~~~~~~ 287 (382)
T TIGR00902 212 AAVCLIQGAHAAYYG-FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQ---NCSARDLLLISAIACVGRWAII 287 (382)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHh---hCCHHHHHHHHHHHHHHHHHHH
Confidence 999998888666554 6665544 445667899999999999999888888875 6778887777666666554433
Q ss_pred hccchhhHHHHHHHHHHHHHh-HhHhhHHHHHHHhcCCCchhHHHHHHhH
Q 024717 158 AYDYQEIGILVALFCLFHACV-GLILPSLARLRTMYVPNELRGGMISLSL 206 (263)
Q Consensus 158 ~~~~~~~~~~~~~Fc~fE~~v-G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr 206 (263)
...+ + ...+....++|.+. |+++|+..+.-.+. |+++|++..++|-
T Consensus 288 ~~~~-~-~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~ 334 (382)
T TIGR00902 288 GAIE-A-FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYN 334 (382)
T ss_pred HhHh-h-HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHH
Confidence 2221 1 22344445555544 99999999888888 9999999999884
No 12
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.01 E-value=3.7e-08 Score=90.39 Aligned_cols=197 Identities=12% Similarity=0.009 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHhhhcc-----cCCccchHHHHHHHHHHHHHHHhcccccCCCCC-cc-h---hhHHHHHHHhcChh---
Q 024717 8 ALIGGQVLANWLVGIDV-----KKGVVPSSTASVFLSILGIICVSRGWTENPKMA-FD-D---YRTSFFTYIFGDKR--- 74 (263)
Q Consensus 8 ~AI~aG~~a~~lv~~~~-----~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~-~~-~---~~~~~~~~i~~d~~--- 74 (263)
-.++++.++.++.+... +.||+.+|....++.+++.+...+.-+|...++ .+ + ..++.++.+.++|+
T Consensus 131 G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (356)
T TIGR00901 131 GMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQ 210 (356)
T ss_pred HHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchH
Confidence 34455666777766540 012999999999888887666554345543211 11 1 11234666777775
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccC--CCCCchHHHHHHHH-HHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH
Q 024717 75 IWLLVLAQACLQFSIALFWILWAPTLVAD--GREVHLGLIFPSLL-GARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG 151 (263)
Q Consensus 75 il~lg~~qslfEgsmy~FVf~WTP~L~~~--~~~~plGlIFs~FM-~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a 151 (263)
++.+.+...++....+ .+..|.|.+..+ -+....|.++.... ++..+|+.+.+++.. |++.++.+....++.+
T Consensus 211 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~---r~g~~~~l~~~~~~~~ 286 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDS-AATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQ---PLNILYALLLFGIVQA 286 (356)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHH
Confidence 7766666555544444 445566665442 23445688887766 567788888888774 5676666666555555
Q ss_pred HHHHHhhc--cc--------hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHH
Q 024717 152 FVFSIIAY--DY--------QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAP 208 (263)
Q Consensus 152 ~~l~~~~~--~~--------~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~P 208 (263)
........ ++ ........+.++..++.|+.+|...++-.+..|+|+|+|+++++..=
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 353 (356)
T TIGR00901 287 LTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSL 353 (356)
T ss_pred HHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 43332211 11 11223344555667888999999999999999999999999998753
No 13
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.01 E-value=2.3e-07 Score=83.64 Aligned_cols=201 Identities=16% Similarity=0.132 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc------ch-----------------h
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF------DD-----------------Y 61 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~------~~-----------------~ 61 (263)
+++-.+++..+++++.+. .||+.+|....++.++..++.....+|+..++. ++ .
T Consensus 127 ~~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (399)
T TIGR00893 127 QGLGGIIGGPLVGWILIH---FSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTP 203 (399)
T ss_pred chHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCC
Confidence 344456666777777775 489999998877777666666554455432110 00 0
Q ss_pred hHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCC
Q 024717 62 RTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFR 138 (263)
Q Consensus 62 ~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~ 138 (263)
.++..+.+.+||+++.+.+...+.....+.+. .|.|.+.. +.++...|++.+.+.++..+|+.+.+++..+ .+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~ 279 (399)
T TIGR00893 204 KKYQIKELLKDRRVWGLALGQFLVNIGLGFFL-TWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL---LL 279 (399)
T ss_pred CccchHHHhcCHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH---Hh
Confidence 01124567899999988887777776666544 46665543 3345567899999999999998888877642 22
Q ss_pred chh--HHH--HHHHHHH--HHHHHhhccchhhHHHHH-HHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 139 TED--CLL--YAFVVLG--FVFSIIAYDYQEIGILVA-LFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 139 ~~~--~l~--~~~~~~a--~~l~~~~~~~~~~~~~~~-~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
.++ ... ....+.. .++........+...... .+++.-.+.| .+|....+-.+.+|+|.|+++++++..--|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 358 (399)
T TIGR00893 280 RRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNL 358 (399)
T ss_pred hcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHH
Confidence 221 111 1111111 111111111111112222 2333334445 8999999999999999999999999988787
Q ss_pred HH
Q 024717 212 AI 213 (263)
Q Consensus 212 ~v 213 (263)
.-
T Consensus 359 g~ 360 (399)
T TIGR00893 359 GG 360 (399)
T ss_pred hh
Confidence 53
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.01 E-value=1.7e-07 Score=87.36 Aligned_cols=198 Identities=15% Similarity=0.137 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC-Cc---chhhHHHHHHHhcCh---hHHHHH
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-AF---DDYRTSFFTYIFGDK---RIWLLV 79 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~---~~~~~~~~~~i~~d~---~il~lg 79 (263)
+-++++..++..+.+. .+|+.+|.+..++.++..++.....+|+... ++ ++.+++....+.+++ +.+.+.
T Consensus 150 ~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (406)
T PRK11551 150 FGGALASVIGVLAAGD---AAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLW 226 (406)
T ss_pred HHHHHHHHHHHHHccc---cCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHH
Confidence 3344555666666664 5899999987766666665555545665422 11 111112233334332 233222
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccC--CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh
Q 024717 80 LAQACLQFSIALFWILWAPTLVAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII 157 (263)
Q Consensus 80 ~~qslfEgsmy~FVf~WTP~L~~~--~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~ 157 (263)
. ...+....+..+..|.|.+.++ -++...|++++.+.+...+|+.+.+++.. |.+.++.+...+...++++...
T Consensus 227 ~-~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~~~~~~~~~~~~~~~~~~~ 302 (406)
T PRK11551 227 I-SYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMD---RLRPRRVVLLIYAGILASLAAL 302 (406)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHH
Confidence 2 2233344455667788988763 34566899999999999999999998875 4566666655444444443332
Q ss_pred hccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 158 AYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 158 ~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
...+ +.........++.++.+...|....+-.+.+|+++|+++++++..=-++.
T Consensus 303 ~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 356 (406)
T PRK11551 303 AAAP-SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLG 356 (406)
T ss_pred HhcC-cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHH
Confidence 2222 11222334445555566778999999999999999999999988766664
No 15
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.99 E-value=1.4e-07 Score=86.18 Aligned_cols=199 Identities=18% Similarity=0.133 Sum_probs=118.7
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQAC 84 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qsl 84 (263)
+++-.+++..+++++++. .||+.+|...+++.++..++..+..+|...++.++..+...+.+.+||+...+-....+
T Consensus 134 ~~~g~~ig~~~~~~l~~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (375)
T TIGR00899 134 ISLAWVIGPPLAFWLALG---FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALTRLEVRGLLASRDTRLLFVACTL 210 (375)
T ss_pred HhHHHHHhhhHHHHHHHh---cccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccCcchhhhhhcCcchHHHHHHHHH
Confidence 345556677788888875 48999999988887777777665455533222111122234457778877655444333
Q ss_pred HHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccc
Q 024717 85 LQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY 161 (263)
Q Consensus 85 fEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~ 161 (263)
.-+. +.....|.|.+.. +.++...|++++.......++..+.+++.. |.+.++.+.....+...........
T Consensus 211 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~- 285 (375)
T TIGR00899 211 MWGC-NILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIK---RFGKRRLMLLAALAGVAFYTGLAAD- 285 (375)
T ss_pred HHHH-HHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH---HhcchhHHHHHHHHHHHHHHHHHHH-
Confidence 3222 2223346666543 334556788887777777777777777764 4455555555444433332221111
Q ss_pred hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 162 QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 162 ~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
++.........+.-++.|...|.....-.+..|++ |+++++++..-.|+-
T Consensus 286 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g 335 (375)
T TIGR00899 286 NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVG 335 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHH
Confidence 12122223333445567888998888888888865 569999998888864
No 16
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.97 E-value=3.9e-07 Score=86.04 Aligned_cols=235 Identities=14% Similarity=0.064 Sum_probs=127.5
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc---chh---h---HHHHHHHhcChhH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF---DDY---R---TSFFTYIFGDKRI 75 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~---~~~---~---~~~~~~i~~d~~i 75 (263)
+++..+++..+++++++. .+..+|.+.+.+.+++.+.. ...+|...++. .+. . ++.++.+++||++
T Consensus 133 ~~~~~~~Gp~lgG~l~~~----~~~~~~~i~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 207 (393)
T PRK11195 133 TIAAILLGTVLGGALADP----HAEAALAVCALIYLLAALFN-LFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLG 207 (393)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH-hcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchh
Confidence 344456677888888874 36667766665555554433 33555432211 111 1 1235667888876
Q ss_pred HHHHHHHHHHHHHHHHHHH---hhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH
Q 024717 76 WLLVLAQACLQFSIALFWI---LWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF 152 (263)
Q Consensus 76 l~lg~~qslfEgsmy~FVf---~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~ 152 (263)
...-....++-+..+...+ .|.|... +.++...|++.+.+-+...+|+.+.+++..+ .+..+.+...+..+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-g~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~---~~~~~~~~~g~~~~~~ 283 (393)
T PRK11195 208 RFSLAGTTLFWGAGATLRFLVLAWAPVAL-GITLNQPAYLQAVVAIGIAVGAGAAARLVTL---ETVLRVLPAGILMGLV 283 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCChhHHHHHHHHHHHHHHHHHHHHHHHhcC---CcccchHHHHHHHHHH
Confidence 6544444444333332222 3554432 3455679999999999999999999888652 2333444444333222
Q ss_pred HHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCch-hHHHHHHhHHHHHHHHHHHHHhhhhccccchhHH
Q 024717 153 VFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNEL-RGGMISLSLAPANAAILLFLLLRGFYRNIENAAM 231 (263)
Q Consensus 153 ~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~-Ratvm~~fr~PlN~~v~~~l~~g~~~~~~~~~~~ 231 (263)
.+..+. .+ +.........++-.+.|++.|.+.++..+..|||. |++++++...=-|+...+.....+.-.+.+-...
T Consensus 284 ~~~~~~-~~-~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (393)
T PRK11195 284 VLLMAL-QH-SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVV 361 (393)
T ss_pred HHHHHH-Hh-HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 222221 11 11222344446667778888888888877777765 7888776665555542222111111113343445
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 024717 232 VAFAALGLFIAAGCMHVLK 250 (263)
Q Consensus 232 ~~~~~~~l~l~~~~~~~~~ 250 (263)
..+..++++......-..|
T Consensus 362 ~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 362 AVIVGFGLLVALAMALLWR 380 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5666666665554433333
No 17
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.95 E-value=1.2e-07 Score=85.58 Aligned_cols=199 Identities=12% Similarity=-0.009 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc---c--hhhHHHHHHHhcChhHHHHHHHHH
Q 024717 9 LIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF---D--DYRTSFFTYIFGDKRIWLLVLAQA 83 (263)
Q Consensus 9 AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~---~--~~~~~~~~~i~~d~~il~lg~~qs 83 (263)
.++++.+.+.+.+. .||+.+|....++.++..+......+|+..++. . +..+.....+.+||+.+.+.....
T Consensus 139 ~~~~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (377)
T TIGR00890 139 SFILSPLITSVINL---EGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFF 215 (377)
T ss_pred HhHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHH
Confidence 33445555555554 489999998777776666555543333332211 1 111224567888998887766555
Q ss_pred HHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh-hccc
Q 024717 84 CLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII-AYDY 161 (263)
Q Consensus 84 lfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~-~~~~ 161 (263)
+.-...+.+...+.|..++ +.++...|++.+.+.+...+|+.+.+++.. |.+.++.+....++.+++.... ..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T TIGR00890 216 LNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSD---KIGRQKTMSIVFGISAVGMAAMLFIPM 292 (377)
T ss_pred HHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhhhhhhHHHHHHHHHHHHHHHccc
Confidence 4444433333344444332 333445788899999999999999988875 4555555555555554433322 2222
Q ss_pred hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 162 QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 162 ~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
......+...++.-.+.|..++....+-.+..|+++|+++++++..--++-.
T Consensus 293 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 344 (377)
T TIGR00890 293 LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAG 344 (377)
T ss_pred chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHH
Confidence 1111122334555666788888888888999999999999999998877753
No 18
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.94 E-value=5.2e-07 Score=84.11 Aligned_cols=187 Identities=14% Similarity=0.076 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHH---HHHHHH
Q 024717 9 LIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLV---LAQACL 85 (263)
Q Consensus 9 AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg---~~qslf 85 (263)
.+++..+++++.+. .||...|....++.+++.++... .+|...+++ ++..+....++ ++... ..+.+.
T Consensus 161 ~~~g~~l~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~ 231 (399)
T PRK05122 161 LAIGAPLGVLLYHW---GGLAGLGLLIMLLALLGLLLARP-RPAVPPVKG---ERLPFRRVLGR--VWPYGMGLALASIG 231 (399)
T ss_pred HHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCc---cchhHHHHHHH--HHHHHHHHHHHHHH
Confidence 45667778888875 48888887777666655544432 222211111 11122222222 22211 122222
Q ss_pred HHHHHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhH
Q 024717 86 QFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIG 165 (263)
Q Consensus 86 Egsmy~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~ 165 (263)
.+. +..|.|.+..+.+-...|+..+.+.++..+|..+.+++.. |.++++.+.....+.+.++......+ +..
T Consensus 232 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~---r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 303 (399)
T PRK05122 232 FGT----IATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLIN---RLGGLRVAIVSLLVEILGLLLLWLAP-SPW 303 (399)
T ss_pred HHH----HHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHhc-cHH
Confidence 332 3345555433222134577778888888899888888775 44555555555444444333322222 112
Q ss_pred HHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 166 ILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 166 ~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
..+....++-++.|..+|.+...-.+..|+|+|+++++++..--|+-
T Consensus 304 ~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 350 (399)
T PRK05122 304 MALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLS 350 (399)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 23344555666778899999988889999999999999998777764
No 19
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.94 E-value=4.7e-08 Score=87.89 Aligned_cols=202 Identities=20% Similarity=0.204 Sum_probs=126.6
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhc-ccccCCCCC---cchh---hH----HHHHHHhcC
Q 024717 4 FESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSR-GWTENPKMA---FDDY---RT----SFFTYIFGD 72 (263)
Q Consensus 4 ~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~-~w~ENyg~~---~~~~---~~----~~~~~i~~d 72 (263)
.+++..+++..+++++.+. .||+.+|....++.+++.++... .++|+..++ +++. .+ +.++.+.+|
T Consensus 129 ~~~~g~~~g~~l~~~l~~~---~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (352)
T PF07690_consen 129 GFSLGSILGPLLGGFLISY---FGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKN 205 (352)
T ss_dssp HHHHHHHHHHHHHHHCCCH---CHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHH
T ss_pred hhhhhhhcccchhhhhhhc---cccccccccccchhhhhhhhHhhhhhhccccccccccccccccccccccccccccccc
Confidence 4556667778888888865 58999999999999998875433 333333221 1111 11 125667778
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhh-cc--CCC-CCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHH
Q 024717 73 KRIWLLVLAQACLQFSIALFWILWAPTL-VA--DGR-EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFV 148 (263)
Q Consensus 73 ~~il~lg~~qslfEgsmy~FVf~WTP~L-~~--~~~-~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~ 148 (263)
|.++. .++..+.-+..+.....|.|.+ .+ +-+ ....|.+++...+...+++.+.+++.. |.++++.+.....
T Consensus 206 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~ 281 (352)
T PF07690_consen 206 PVLWI-LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSD---RFGRRRRLLIAIL 281 (352)
T ss_dssp HCCHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTCHHHHHHHHH
T ss_pred chhhh-hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCcHHHHHHHHH
Confidence 87652 2233333333444477788886 33 334 467788889889998888888888875 3444444444333
Q ss_pred HHHHHHHHh-hccch-hhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 149 VLGFVFSII-AYDYQ-EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 149 ~~a~~l~~~-~~~~~-~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
......... ..... +.........++-.+.|..+|....+-.+.+|+|+|+++++++..=-|+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~ 347 (352)
T PF07690_consen 282 LLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLG 347 (352)
T ss_dssp HHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 333222222 21221 22233445566677789999999999999999999999999988655543
No 20
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.93 E-value=1.1e-06 Score=82.19 Aligned_cols=195 Identities=15% Similarity=0.065 Sum_probs=121.0
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC-Ccchh--hHHHHHHHhcChhHHHHHH
Q 024717 4 FESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-AFDDY--RTSFFTYIFGDKRIWLLVL 80 (263)
Q Consensus 4 ~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~~~~--~~~~~~~i~~d~~il~lg~ 80 (263)
++++-.+++..+++++.+. .||+.+|+...+..++..+......+++..+ ++++. ..+.++.++|||+.+.+.+
T Consensus 136 ~~~lg~~igp~lgg~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 212 (382)
T PRK11128 136 WGSIAFVIGSALTGKLVSW---FGEQAILWILTAGVASMLLGQLLRPTIMPQGESRQQESAGWPAWKALLKEPTVWRFLL 212 (382)
T ss_pred HHHHHHHHHHHHHHHHHHH---cChhHHHHHHHHHHHHHHHHHHccCCCCCccccccccccccchHHHHHcChhHHHHHH
Confidence 3456667788899999886 4999999988877666665555433322211 11111 1246788999999988766
Q ss_pred HHHHHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhc
Q 024717 81 AQACLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAY 159 (263)
Q Consensus 81 ~qslfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~ 159 (263)
...+.....+.+.....|.+.+ +.++...|++++.-.+...++..+.+++.. |.+.++.+.....+.+++......
T Consensus 213 ~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~---r~~~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T PRK11128 213 CVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFR---RWSARDLLLLSAICGVVRWGLMGS 289 (382)
T ss_pred HHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH---HCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6666554432222222333322 345556798888777777777787878764 567777777766666655443322
Q ss_pred cchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhH
Q 024717 160 DYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSL 206 (263)
Q Consensus 160 ~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr 206 (263)
.+ +....+...++.=++.|++.|.+...-.+. |+++++++++.+.
T Consensus 290 ~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 334 (382)
T PRK11128 290 TT-ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYS 334 (382)
T ss_pred hh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHH
Confidence 22 111122233333345688899998887775 6777889999875
No 21
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.93 E-value=5.4e-07 Score=84.13 Aligned_cols=198 Identities=11% Similarity=0.019 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc-chhhHHHHHHHhcChhHHHHHHHHHHHHH
Q 024717 9 LIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF-DDYRTSFFTYIFGDKRIWLLVLAQACLQF 87 (263)
Q Consensus 9 AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~-~~~~~~~~~~i~~d~~il~lg~~qslfEg 87 (263)
.++++..++++.+. .||+.+|.+..++.++..+......+|...+++ .+...+.+..++|||+++.+...-.++..
T Consensus 146 ~~~g~~~~~~l~~~---~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 222 (390)
T TIGR02718 146 FFGGGAGTLVLFGK---FGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAPLARRASLFRFFRRPLAWSLLALALLSAM 222 (390)
T ss_pred HHHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccchhhHHHHHHHHcCcCHHHHHHHHHHHHH
Confidence 34555566678876 499999999998888877776554444322211 11122346678899987766655555544
Q ss_pred HHHHHHHhhhhhhcc--CCCCCchHHHHHHHH-HHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH-HHHHhhccc--
Q 024717 88 SIALFWILWAPTLVA--DGREVHLGLIFPSLL-GARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF-VFSIIAYDY-- 161 (263)
Q Consensus 88 smy~FVf~WTP~L~~--~~~~~plGlIFs~FM-~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~-~l~~~~~~~-- 161 (263)
+.+.+. .|.|.+.+ +-++...|+++..+. ....+|..+.+++.. |+++++.+.....+.+. .+.......
T Consensus 223 ~~~~~~-~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~---r~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 298 (390)
T TIGR02718 223 TAVSGF-GLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVR---RAGLWRTFILGVGLAGSLALLWFAQAAFW 298 (390)
T ss_pred HHHHHH-HHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 333332 24444433 334556788888775 466677888888775 56777766655544421 111111000
Q ss_pred -hhhHHHHHH-HHHHHHHhHhHhhHHHHHHHhcCCC-chhHHHHHHhHHHHHHHH
Q 024717 162 -QEIGILVAL-FCLFHACVGLILPSLARLRTMYVPN-ELRGGMISLSLAPANAAI 213 (263)
Q Consensus 162 -~~~~~~~~~-Fc~fE~~vG~y~P~m~~Lr~~~Vp~-e~Ratvm~~fr~PlN~~v 213 (263)
.......+. +++..++.|..+|.+...-.++.++ |.|++.+++++.=.|+-.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~ 353 (390)
T TIGR02718 299 LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE 353 (390)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence 011112233 3444567799999999988888887 899999999988777754
No 22
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.88 E-value=1.3e-06 Score=81.37 Aligned_cols=196 Identities=14% Similarity=0.090 Sum_probs=114.9
Q ss_pred HHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCC-cchhhHHHHHHHhcChhHHHHHHHHHHHHHH
Q 024717 10 IGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA-FDDYRTSFFTYIFGDKRIWLLVLAQACLQFS 88 (263)
Q Consensus 10 I~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~-~~~~~~~~~~~i~~d~~il~lg~~qslfEgs 88 (263)
+.+..+++++.+. .||+.+|....+..++..++.....+|...++ +++..++.++.+.+||+.+.......+.-..
T Consensus 146 ~~g~~i~~~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (394)
T PRK11652 146 LLAPLIGGLLTTL---FGWRACYLFLLLLGAGVTFSMARWMPETRPADARRTRVLASYRTLLSNRRFNCYLLMLIGTLAG 222 (394)
T ss_pred HHHHHHHHHHHhc---cChHHHHHHHHHHHHHHHHHHHHhCCccCccccchhHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 3445566777664 48999999877666655554444345543222 2222345677889999876544443333333
Q ss_pred HHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHH-HHHHHHHHHHHHhhccc-hh
Q 024717 89 IALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLL-YAFVVLGFVFSIIAYDY-QE 163 (263)
Q Consensus 89 my~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~-~~~~~~a~~l~~~~~~~-~~ 163 (263)
+..|-. +.|.+.+ +-++...|++++...++..+|+.+.+++..+ .+...... ....+....+..+.... ..
T Consensus 223 ~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (394)
T PRK11652 223 IAVFEA-CSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKR---FSTLMWQSVICCLLAGLLMWIPGWFGVMN 298 (394)
T ss_pred HHHHHH-hChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 333322 2333333 3345667999999999999999988887652 22111111 11122223333332111 11
Q ss_pred hHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 164 IGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 164 ~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
........+++-.+.|+.+|.+.....+..| ++|+++.+++..=.|+..
T Consensus 299 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~ 347 (394)
T PRK11652 299 VWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGS 347 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHH
Confidence 1223455677777889999999999999888 578999888875555543
No 23
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.88 E-value=2.1e-06 Score=78.63 Aligned_cols=197 Identities=13% Similarity=0.053 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcc---hhhHHHHHHHhcChhHHHHHHHH
Q 024717 6 SAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFD---DYRTSFFTYIFGDKRIWLLVLAQ 82 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~---~~~~~~~~~i~~d~~il~lg~~q 82 (263)
++-.+++..+++++.+. .||+.+|.......+++.++.....+|+..++++ +..++.+..+.+||+++...+..
T Consensus 139 ~~g~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (385)
T TIGR00710 139 ALAPAVAPLLGGYILVW---LSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQISTYFETFLLLLKSKMFWGYALIY 215 (385)
T ss_pred HHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHHHcCchhHHHHHHH
Confidence 33344566777777775 4899999988777777777666555665433221 12234566788999999888887
Q ss_pred HHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHH---HH
Q 024717 83 ACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVF---SI 156 (263)
Q Consensus 83 slfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l---~~ 156 (263)
.+..+..+.+. .|.|.+.. +.++...|++++.+.+..++|+.+.+++.. |.+.++.+.....+..++. ..
T Consensus 216 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 216 GASFGGFFAFF-SGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIK---KWGAKSLLRMGLILFAVSAVLLEI 291 (385)
T ss_pred HHHHHHHHHHH-HcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666554 34555433 334556789999999999999999998875 4566665554443333222 21
Q ss_pred hhccc-hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHH
Q 024717 157 IAYDY-QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPAN 210 (263)
Q Consensus 157 ~~~~~-~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN 210 (263)
..... ......+..++++-.+.|..+|.......+..| ++|+++++++..--+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 345 (385)
T TIGR00710 292 TAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRL 345 (385)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHH
Confidence 11111 111122333445556678888888888888777 578999998765433
No 24
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.86 E-value=1.9e-06 Score=79.25 Aligned_cols=194 Identities=15% Similarity=0.114 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcc-h--h--hHHHHHHHhcChhHHHHHH
Q 024717 6 SAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFD-D--Y--RTSFFTYIFGDKRIWLLVL 80 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~-~--~--~~~~~~~i~~d~~il~lg~ 80 (263)
++-.+++..+++++.+. .||+.+|.....+.+++.+++....+|+..++++ + . ..+.+..+.+||+++...+
T Consensus 125 ~~g~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (377)
T PRK11102 125 TIAPLLAPIIGGWLLVW---FSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYML 201 (377)
T ss_pred HHHHHHHHHHHHHHHHH---cChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHH
Confidence 44455666777788775 4899999988887777777666555665433211 1 1 1234567889999988887
Q ss_pred HHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHH---HHHH
Q 024717 81 AQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL---GFVF 154 (263)
Q Consensus 81 ~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~---a~~l 154 (263)
...+....++.+. .|.|.+.. +-++...|++++...+...+++.+.+++.. |.+.++.+.....+. +..+
T Consensus 202 ~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~---r~g~~~~~~~~~~~~~~~~~~~ 277 (377)
T PRK11102 202 ASGFSFAGMFSFL-TAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVR---RVGALNMLRFGLWIQFIMGIWL 277 (377)
T ss_pred HHHHHHHHHHHHH-HcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCHHHHHHHHHHHHHHHHHHH
Confidence 7777666655443 45565433 334566899999999999999999998875 566666665544332 2222
Q ss_pred HHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHH
Q 024717 155 SIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 155 ~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
......+........+..++-...++..+.....-.+..| |+|+++++++..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~ 329 (377)
T PRK11102 278 VVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGT 329 (377)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHH
Confidence 2111111111111222333334445555555444445555 789999988653
No 25
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.84 E-value=1.1e-06 Score=82.76 Aligned_cols=194 Identities=11% Similarity=0.072 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHHHHHH
Q 024717 9 LIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFS 88 (263)
Q Consensus 9 AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qslfEgs 88 (263)
..+++.++.++.+.. .||+..+..-.+..++..+......+++..+++++ + ......++||+.+.+.+...++...
T Consensus 145 ~~~g~~~~~~l~~~~--~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~~~~~~~l~~~~~~~~~~ 220 (393)
T PRK09705 145 GGLGAAITPWLVQHS--ETWYQTLAWWALPAVVALFAWWWQSAREVASSHKT-T-TTPVRVVFTPRAWTLGVYFGLINGG 220 (393)
T ss_pred HHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCC-C-cCCcccccCHhHHHHHHHHHHHHHH
Confidence 455666777777753 47777665433333333332222222222111111 1 1223456789988888777666554
Q ss_pred HHHHHHhhhhhhccC--CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh-hccchhhH
Q 024717 89 IALFWILWAPTLVAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII-AYDYQEIG 165 (263)
Q Consensus 89 my~FVf~WTP~L~~~--~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~-~~~~~~~~ 165 (263)
|..+..|.|.+..+ -+...-|.+.+.+.++.++|+.+.+++.. |.+.++.+...+.+.+...... ..+...
T Consensus 221 -~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~---r~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 294 (393)
T PRK09705 221 -YASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMAR---HQDRRKLLMLALVLQLVGFCGFIWLPLQL-- 294 (393)
T ss_pred -HHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHh---hccchHHHHHHHHHHHHHHHHHHHccchH--
Confidence 44455688877653 23455789999999999999999998765 4555555555544444333221 122211
Q ss_pred HHHHHHHHHHHHhHhHhhHHHHHHHhcC-CCchhHHHHHHhHHHHHHHH
Q 024717 166 ILVALFCLFHACVGLILPSLARLRTMYV-PNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 166 ~~~~~Fc~fE~~vG~y~P~m~~Lr~~~V-p~e~Ratvm~~fr~PlN~~v 213 (263)
..++ ++++=...|..+|....+-.+.. |+|.|++++|+.+..-|+..
T Consensus 295 ~~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~ 342 (393)
T PRK09705 295 PVLW-AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIA 342 (393)
T ss_pred HHHH-HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 1122 23333445778887776666666 47899999999999988763
No 26
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.84 E-value=2.6e-06 Score=80.15 Aligned_cols=195 Identities=14% Similarity=0.092 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC--Ccch---hhHHHHHHHhcChhHHHHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM--AFDD---YRTSFFTYIFGDKRIWLLV 79 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~--~~~~---~~~~~~~~i~~d~~il~lg 79 (263)
+++-.++++.++.++.+.. .||+.+|....++.++..+... ..+|.... ++++ ..++.++.+++||+.+.+-
T Consensus 139 ~~~g~i~g~~l~~~l~~~~--~gw~~~f~i~a~~~l~~~l~~~-~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 215 (402)
T PRK11902 139 YRLAMLVSGGLALWLADRV--LGWGNTYLLMAGLMLAGALTTL-WAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALL 215 (402)
T ss_pred HHHHHHHHhHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHHHH-hcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHH
Confidence 4556677777888887753 5999999987776666555433 34554321 1111 1234577889999887766
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHH-HHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH---
Q 024717 80 LAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLL-GARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV--- 153 (263)
Q Consensus 80 ~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM-~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~--- 153 (263)
+...++....+......+|.+.. +-++...|+++.... ++.++|+.+.+++.. |++.++.+.....+..++
T Consensus 216 ~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~---r~g~~~~l~~~~~~~~l~~l~ 292 (402)
T PRK11902 216 LLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMV---RLGLYRSLMLFGVLQAVSNLG 292 (402)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHH
Confidence 66666665443222234555543 224445788887664 468888888888875 455556554444333322
Q ss_pred HHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHh
Q 024717 154 FSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLS 205 (263)
Q Consensus 154 l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~f 205 (263)
+......+.+......+..+.+++.|+.+..+..+..+++.++.+++.++.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (402)
T PRK11902 293 YWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALL 344 (402)
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 2111111112222233344444565666555555555555555555554443
No 27
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.84 E-value=1.8e-06 Score=84.32 Aligned_cols=201 Identities=16% Similarity=0.143 Sum_probs=124.1
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC--Ccchh---hHHHHHHHhcChhHHHHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM--AFDDY---RTSFFTYIFGDKRIWLLV 79 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~--~~~~~---~~~~~~~i~~d~~il~lg 79 (263)
+.+-.++++.++.++.+.. .||+.+|....++.+++.+.... .+|.... ++++. ..+.++.++++++.+.+.
T Consensus 152 ~~lG~llg~~l~~~l~~~~--~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l 228 (491)
T PRK11010 152 YRLAMLVSGGLALWLADRY--LGWQGMYWLMAALLIPCIIATLL-APEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLIL 228 (491)
T ss_pred HHHHHHHHHHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccchhhhHHHHHHHHHcCcCHHHHH
Confidence 3445566777778888732 59999999988777777665554 4664321 11111 113456677777776655
Q ss_pred HHHHHHHHHHHHHHHhhhhhh-cc--CCCCCchHHHHHHH-HHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH---
Q 024717 80 LAQACLQFSIALFWILWAPTL-VA--DGREVHLGLIFPSL-LGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF--- 152 (263)
Q Consensus 80 ~~qslfEgsmy~FVf~WTP~L-~~--~~~~~plGlIFs~F-M~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~--- 152 (263)
+...++.... .+.+.|.|.+ .+ +-+....|+++... .++.++|+.+.+++.. |++.++.+.....+.++
T Consensus 229 l~~~l~~~~~-~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~d---r~g~~~~l~i~~~l~~l~~l 304 (491)
T PRK11010 229 LLIVLYKLGD-AFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQ---RLSLFRALMIFGILQGVSNA 304 (491)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHH
Confidence 5555555433 3444555554 33 33556688888644 5788899998888875 45555554433332222
Q ss_pred HHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 153 VFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 153 ~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+.......++......+.++...|.|+.+++...+-.+++|++.++|.++++..--|+-
T Consensus 305 ~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg 364 (491)
T PRK11010 305 GYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVG 364 (491)
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 111111111121222345666667779999999999999999999999999988766664
No 28
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.84 E-value=5.1e-07 Score=95.85 Aligned_cols=200 Identities=16% Similarity=0.123 Sum_probs=129.8
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC-Cc----chh---hHHHHHHHhcChhHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-AF----DDY---RTSFFTYIFGDKRIW 76 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~----~~~---~~~~~~~i~~d~~il 76 (263)
.++..+++..+++++++. .||...|..++.+.+++.++... .+|+..+ +. .+. ..+.++.+.+||.++
T Consensus 153 ~~ig~~igp~l~g~l~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (1140)
T PRK06814 153 TFIAILLGTIIGGLATIS---GNFVILVALLMGIAVLGWLASLF-IPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIW 228 (1140)
T ss_pred HHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhh-CCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHH
Confidence 445566778888999886 48877775666666655555444 4443321 11 111 124578889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH-
Q 024717 77 LLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF- 152 (263)
Q Consensus 77 ~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~- 152 (263)
.+.+...++-...+.+. .|.|.+.. +.+....|++++.+-+.+.+|+.+.+++..+ ....+.+....++.++
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~---~~~~~~~~~~~~~~~~~ 304 (1140)
T PRK06814 229 LAILGISWFWLVGAVVL-SQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG---RITLLYVPIGALLMGLF 304 (1140)
T ss_pred HHHHHHHHHHHHHHHHH-HHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC---ceeeeeehHHHHHHHHH
Confidence 98888887776665443 47888765 3455668999999999999999999998642 2222233322222222
Q ss_pred HHHHhhc------------------cchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 153 VFSIIAY------------------DYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 153 ~l~~~~~------------------~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+..+.. ..........+.+++=++.|++.|.+..+..+.+|++.|+++++++..--++.
T Consensus 305 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~ 382 (1140)
T PRK06814 305 GLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAF 382 (1140)
T ss_pred HHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHH
Confidence 2111111 00122233344555667779999999999999999999999999998766654
No 29
>PRK03699 putative transporter; Provisional
Probab=98.83 E-value=1.1e-06 Score=82.32 Aligned_cols=193 Identities=10% Similarity=0.028 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHHHHHH
Q 024717 9 LIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFS 88 (263)
Q Consensus 9 AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qslfEgs 88 (263)
++++..+.+++.+.. .||+.+|....++.++..++......++..+++.+..++..+ -..+|+++.+.+...++...
T Consensus 144 ~~~~~~~~~~l~~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 220 (394)
T PRK03699 144 GMIFPIIAAYLLARS--IEWYWVYACIGLVYVAIFILTLFSEFPALGKHAPKADKPVAK-EKWGIGVLFLAIAALLYILA 220 (394)
T ss_pred HHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhcCCccccccCccccCcccc-ccCChHHHHHHHHHHHHHHH
Confidence 345555666665532 699999987666555555544432212111111000111111 12356777777766666666
Q ss_pred HHHHHHhhhhhhccC---CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhH
Q 024717 89 IALFWILWAPTLVAD---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIG 165 (263)
Q Consensus 89 my~FVf~WTP~L~~~---~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~ 165 (263)
.+.+ ..|.|.+.++ -+...-|.+++.+.++..+|..+.+++.. |+++++.+.....+.+..+....... +..
T Consensus 221 ~~~~-~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d---r~~~~~~l~~~~~~~~~~~~~~~~~~-~~~ 295 (394)
T PRK03699 221 QLTF-ISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVR---FFDLQRILTVLAGLALVLMYLFVNTD-DPS 295 (394)
T ss_pred HHHH-HHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHH---HhchhhHHHHHHHHHHHHHHHHHHcC-Cch
Confidence 5544 5799988752 23445789999999999999999988874 56666666555554444333322222 212
Q ss_pred HHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHH
Q 024717 166 ILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPAN 210 (263)
Q Consensus 166 ~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN 210 (263)
......+++-.+.|..+|.+...-.+..|++ +++.+++...=-+
T Consensus 296 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 339 (394)
T PRK03699 296 HLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGT 339 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhh
Confidence 2233445566667888898887777777654 5666666544333
No 30
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.83 E-value=1.4e-06 Score=82.30 Aligned_cols=201 Identities=14% Similarity=0.112 Sum_probs=126.8
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcc--hhh--HHHHHHHhcChhHHHHH
Q 024717 4 FESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFD--DYR--TSFFTYIFGDKRIWLLV 79 (263)
Q Consensus 4 ~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~--~~~--~~~~~~i~~d~~il~lg 79 (263)
.+.+-.+++..++.++.+. .||+.-|..-.++.++..++.....+|++.++.+ +.. .+.++.+++||+++.+.
T Consensus 122 ~~~lG~~l~~~~~~~l~~~---~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 198 (368)
T TIGR00903 122 AMYLGIIFALAAGLKIYTA---GGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGFKDAVKEFGALAGRKDLWIIG 198 (368)
T ss_pred HHHHHHHHHHHHHHHHHHc---cchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchHHHHHHHHHHHcChhHHHHH
Confidence 4566677788888988885 5999999986666666666666556665432211 101 13567899999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccCC-CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhH-HHHHHHHHHHHHHHh
Q 024717 80 LAQACLQFSIALFWILWAPTLVADG-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDC-LLYAFVVLGFVFSII 157 (263)
Q Consensus 80 ~~qslfEgsmy~FVf~WTP~L~~~~-~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~-l~~~~~~~a~~l~~~ 157 (263)
+...+.....|.+ ..|.|.+.++. -+..-|...+...+..++|+........ |.+.++. ........++++...
T Consensus 199 ~~~~~~~~~~~~~-~~wlp~~L~~~g~s~~~~~~~~l~~~~g~~g~~~~~d~~~---r~~~r~~~~~~~~~~~a~~~~~~ 274 (368)
T TIGR00903 199 AILGFGVALFDNL-AIWLEAALRPAGLEDIAGDAVALAILAGLIGVAVIPDRVA---RAGLRSIYIRAAALLIAAFFLAL 274 (368)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhhHHhh---hhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999998866 57999998632 2223466666666666666533222221 1111111 222222223222222
Q ss_pred hccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 158 AYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 158 ~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
....+. ...+..+++.-.+++..+|.+..+-.+..|+|.|+|++|+...=-|+.
T Consensus 275 ~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~ 328 (368)
T TIGR00903 275 AFELNR-LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAI 328 (368)
T ss_pred HHcccc-HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHH
Confidence 212111 223445566667778888988899999999999999999988766665
No 31
>TIGR00895 2A0115 benzoate transport.
Probab=98.83 E-value=1.1e-06 Score=80.04 Aligned_cols=199 Identities=17% Similarity=0.165 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC---C------------------------
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM---A------------------------ 57 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~---~------------------------ 57 (263)
+.+-.+++..+++++.+. .||+.+|.....+..+..++.....+|++.. +
T Consensus 150 ~~~g~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (398)
T TIGR00895 150 YPIGAAVGGFLAGWLIPV---FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSAL 226 (398)
T ss_pred HHHHHHHHHHHHHHHhhc---ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccc
Confidence 444556667777787775 4899999988655555555554444554310 0
Q ss_pred --c-c--hhhHHHHHHHhcCh---hHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhh
Q 024717 58 --F-D--DYRTSFFTYIFGDK---RIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVF 127 (263)
Q Consensus 58 --~-~--~~~~~~~~~i~~d~---~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f 127 (263)
. . +..++..+.+.+++ +.+.+.+ ...+....+.++..|.|.+.. +.++...|++.+.+.++.++|+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 305 (398)
T TIGR00895 227 PEQKATQGTKRSVFKALFQGKTARITVLLWL-LYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIF 305 (398)
T ss_pred cccccccchhhHHHHHHhcchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00111122233322 2222222 233444555667778886654 3344567899999999999999999
Q ss_pred hhhhcCCCCCCchhHHHHHHHHHH-HHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhH
Q 024717 128 PWLISGPSSFRTEDCLLYAFVVLG-FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSL 206 (263)
Q Consensus 128 ~~l~~~~~~~~~~~~l~~~~~~~a-~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr 206 (263)
+.+.. |.+.+..+ ....+.+ .++.... ...+....+...+++-++.|..+|....+-.+.+|++.|+++++++.
T Consensus 306 ~~l~~---~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 380 (398)
T TIGR00895 306 GWLAD---RLGPRVTA-LLLLLGAVFAVLVGS-TLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAI 380 (398)
T ss_pred HHHHh---hcchHHHH-HHHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 98875 34444332 2222222 2222221 11122234566777888889999999999999999999999999988
Q ss_pred HHHHHH
Q 024717 207 APANAA 212 (263)
Q Consensus 207 ~PlN~~ 212 (263)
.--++.
T Consensus 381 ~~~~~g 386 (398)
T TIGR00895 381 GIGRLG 386 (398)
T ss_pred HHHHHH
Confidence 766554
No 32
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.81 E-value=2e-06 Score=90.74 Aligned_cols=201 Identities=15% Similarity=0.208 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHHHHHhhh--------cccCCccch-HHHHHHHHHHHHHHHhcccccCCCC-Cc---c------hhhHHH
Q 024717 5 ESAALIGGQVLANWLVGI--------DVKKGVVPS-STASVFLSILGIICVSRGWTENPKM-AF---D------DYRTSF 65 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~--------~~~~g~~aP-F~~a~~~l~i~~ili~~~w~ENyg~-~~---~------~~~~~~ 65 (263)
+++..+++.++++++.+. + .++.+. +.+.+.+.+++.++... .+|.... +. + +..++.
T Consensus 148 ~~ig~~lg~~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (1146)
T PRK08633 148 TIVAILAGTALFSFLFESVNGNTPSEI--LGRIAPAGLVLLAVAVLGLIFAYR-LPKVPAAAPEVFDKKKYLFPKLLWRN 224 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccc--ccchHHHHHHHHHHHHHHHHHHhc-CcCCCCCCcccccccccccHHHHHHH
Confidence 445556677788888775 2 122223 33333444444444433 3443221 11 0 111234
Q ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCC-chHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchh
Q 024717 66 FTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREV-HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED 141 (263)
Q Consensus 66 ~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~-plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~ 141 (263)
+..++++|.++.+.+...++....+.+. .|.|.+.. +-+.. ..|++++.+.++..+|+.+.+++.. +.+..+
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~---r~~~~~ 300 (1146)
T PRK08633 225 LKLLRSDRVLWLAIIGLSYFWFISQLAQ-ANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSG---RHIELG 300 (1146)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhC---CceEcc
Confidence 6778899998888777777777655443 45565543 33444 6899999999999999999998875 334444
Q ss_pred HHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 142 CLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 142 ~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
.+.+..++.++++....... +....+..+.++=++.|++.|.+..+-.+..|++.|+++++++..--++..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~ 371 (1146)
T PRK08633 301 LVPLGALGLALSLFLLPTAP-SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGM 371 (1146)
T ss_pred chhHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHH
Confidence 44444444443333322221 222334555566677799999999999999999999999998776666543
No 33
>PRK03545 putative arabinose transporter; Provisional
Probab=98.81 E-value=4.6e-06 Score=77.88 Aligned_cols=198 Identities=15% Similarity=0.058 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQAC 84 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qsl 84 (263)
+++..+++..+++.+.+. .||+.+|....++.++..++....-+|...++.+ ..+....+.+||+++.+-....+
T Consensus 142 ~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 216 (390)
T PRK03545 142 TALAMVLGLPLGRVIGQY---LGWRTTFLAIGGGALITLLLLIKLLPLLPSEHSG--SLKSLPLLFRRPALVSLYLLTVV 216 (390)
T ss_pred HHHHHHHHhhHHHHHHHH---hcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc--hHHHHHHHHhCcHHHHHHHHHHH
Confidence 445556667777877775 4999999998887777766655433333222111 12345678899988765555444
Q ss_pred HHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccc
Q 024717 85 LQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY 161 (263)
Q Consensus 85 fEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~ 161 (263)
.....+. .+.|.|.+.. +.++...|++++.+.+...+|+.+.+++.. |.+.+. +.....+...+........
T Consensus 217 ~~~~~~~-~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d---r~~~~~-~~~~~~~~~~~~~~l~~~~ 291 (390)
T PRK03545 217 VVTAHFT-AYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGN---RHPSGF-LLIAIALLLVCLLLLLPAA 291 (390)
T ss_pred HHHHHHH-HHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhH-HHHHHHHHHHHHHHHHHHh
Confidence 4443333 3445554433 234556899999999999999999998875 333332 3333332222222111111
Q ss_pred hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 162 QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 162 ~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
.+......+..++-++.+...|.+...-.+..| |.|+++++++..-.++-.
T Consensus 292 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~ 342 (390)
T PRK03545 292 NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGI 342 (390)
T ss_pred chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHH
Confidence 111111222223333444455666666666666 588999999988887743
No 34
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.81 E-value=6.6e-07 Score=79.69 Aligned_cols=182 Identities=18% Similarity=0.147 Sum_probs=133.0
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQAC 84 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qsl 84 (263)
.++-.+.+..+++++.+.. +|+.+|.....+.+++.++..... |+++.+.+...+
T Consensus 132 ~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~ 186 (352)
T cd06174 132 FGLGALLGPLLGGLLAESL---GWRWLFLILAILGLLLALLLLFLL----------------------RLLLLLALAFFL 186 (352)
T ss_pred HHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHH
Confidence 3455566677778887763 788899988888888777665432 778888888888
Q ss_pred HHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchh-HHHHHHHHHHHHHHHhhccc
Q 024717 85 LQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED-CLLYAFVVLGFVFSIIAYDY 161 (263)
Q Consensus 85 fEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~-~l~~~~~~~a~~l~~~~~~~ 161 (263)
.......+...+++.+.+ +.++...|++.+...+...+|+.+.+++.+ |.+.++ .+.....+...+.......+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 187 LSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSD---RLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 877777776655555544 346677899999999999999999988764 445555 55555555554443332222
Q ss_pred hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHH
Q 024717 162 QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILL 215 (263)
Q Consensus 162 ~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~ 215 (263)
. ........+++..+.|..+|....+-.+.+|+|+|+++++++..--|+.-.+
T Consensus 264 ~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 316 (352)
T cd06174 264 S-LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGAL 316 (352)
T ss_pred c-HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2335677888888899999999999999999999999999999988886433
No 35
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.77 E-value=2.2e-06 Score=81.56 Aligned_cols=180 Identities=13% Similarity=0.090 Sum_probs=100.4
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCCCCCcch-hhHHHHHHHhcChhHHHHHHHHHHH-HHHHHHHHHhhhhhhccC
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENPKMAFDD-YRTSFFTYIFGDKRIWLLVLAQACL-QFSIALFWILWAPTLVAD 103 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~-~~~~~~~~i~~d~~il~lg~~qslf-Egsmy~FVf~WTP~L~~~ 103 (263)
.||+.||..+.+..++...+ ...-+|....+..+ .+++.++.+++||+.+.+.+...+. ....|. ...|.|.+..+
T Consensus 195 ~gWr~~F~i~~~~~ll~~~~-~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~l~~ 272 (432)
T PRK10406 195 WGWRIPFALGAVLAVVALWL-RRQLDETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYT-FTTYMQKYLVN 272 (432)
T ss_pred cchHHHHHHHHHHHHHHHHH-HhcCCCCchHHHhhhcccccHHHHHhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 69999999988877766443 22234432111111 1112366788899988877766655 444444 45699987542
Q ss_pred ---CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHH--Hh-hccchhhHHHHHHHHHHHHH
Q 024717 104 ---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS--II-AYDYQEIGILVALFCLFHAC 177 (263)
Q Consensus 104 ---~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~--~~-~~~~~~~~~~~~~Fc~fE~~ 177 (263)
-+....|++++......+++..+.+++.. |.+.++.+....++.+.+.. .. ..........+..+++.=.+
T Consensus 273 ~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~D---r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (432)
T PRK10406 273 TAGMHANVASGIMTAALFVFMLIQPLIGALSD---KIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLI 349 (432)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 22234566676666666777777776664 34444444433332221111 10 11111111112222223344
Q ss_pred hHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHH
Q 024717 178 VGLILPSLARLRTMYVPNELRGGMISLSLAPAN 210 (263)
Q Consensus 178 vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN 210 (263)
.|.+.+.....-.+..|+|.|++.+|+.-.=-|
T Consensus 350 ~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~ 382 (432)
T PRK10406 350 VSFYTSISGILKAEMFPAQVRALGVGLSYAVAN 382 (432)
T ss_pred HHHHHHHHHHHHHHHCCCCccchhhhHHHHHHH
Confidence 566677777888999999999999998543333
No 36
>PRK12382 putative transporter; Provisional
Probab=98.77 E-value=3.4e-06 Score=78.58 Aligned_cols=190 Identities=19% Similarity=0.141 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc-chhhHHHHHHHhcChhHHHHHHHHHHHH
Q 024717 8 ALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF-DDYRTSFFTYIFGDKRIWLLVLAQACLQ 86 (263)
Q Consensus 8 ~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~-~~~~~~~~~~i~~d~~il~lg~~qslfE 86 (263)
-.+++..+++++.+. .||+..+.+.++..++...... ..+|...+++ ++..++..+.+.+ ++ +.. +..
T Consensus 160 g~~~g~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~-~l~ 228 (392)
T PRK12382 160 ALAAGAPLGLLLHSH---FGFAALALTTMVLPLLAWAFNG-TVRKVPAHAGERPSLWSVVGLIWK-PG-----LGL-ALQ 228 (392)
T ss_pred HHHHHHHHHHHHHhc---cChHHHHHHHHHHHHHHHHHHH-hccCCCCCcccCchHHHHHHHHHH-hH-----HHH-HHH
Confidence 344566777777775 4888777766555444433322 2233221111 1111112221111 11 111 122
Q ss_pred HHHHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHH
Q 024717 87 FSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGI 166 (263)
Q Consensus 87 gsmy~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~ 166 (263)
+..+..+..|.|....+.+..+.|+.++.+.++.++|+.+.+++.. |.++++.+.....+.+.++......+ +...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (392)
T PRK12382 229 GVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPD---RFGGVKVAIVSLLVETVGLLLLWLAP-TAWV 304 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHH---hcCCCeehHHHHHHHHHHHHHHHHcc-cHHH
Confidence 2333344556665544322235678888888888899888888765 45555555555544443333222111 1122
Q ss_pred HHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 167 LVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 167 ~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+....++-.+.|..+|.+...-.+..|+|+|+++++++..--++-
T Consensus 305 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 350 (392)
T PRK12382 305 ALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIA 350 (392)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 3344555566678889999988899999999999999998776664
No 37
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.76 E-value=9e-06 Score=76.77 Aligned_cols=190 Identities=13% Similarity=0.093 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQAC 84 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qsl 84 (263)
+++..+++..+++++.+. .||+..|....++.+++.+++....+|..++++. .++....+++||+++.+.+...+
T Consensus 153 ~~~g~~ig~~l~~~l~~~---~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~ 227 (394)
T PRK10213 153 VSIALVIAAPLGSFLGEL---IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH--QKQNTFRLLQRPGVMAGMIAIFM 227 (394)
T ss_pred HHHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHHHHHHCCCCCccccc--chhHHHHHhcCHHHHHHHHHHHH
Confidence 345566778888888886 4899999998877777666555445665433221 12234567899999887666666
Q ss_pred HHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH-HHHhhccc
Q 024717 85 LQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV-FSIIAYDY 161 (263)
Q Consensus 85 fEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~-l~~~~~~~ 161 (263)
..+..+.+.....|.+.+ +-+....|+++..+.++..+|+.+.+++..+ . .++.+.....+...+ +......+
T Consensus 228 ~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r---~-~~~~l~~~~~~~~~~~~~l~~~~~ 303 (394)
T PRK10213 228 SFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR---S-VKLALAGAPLVLAVSALVLTLWGS 303 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc---c-chhHHHHHHHHHHHHHHHHHHHhh
Confidence 666655554334577765 3344557999999999999999888887752 2 223333332222222 22111122
Q ss_pred hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHh
Q 024717 162 QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLS 205 (263)
Q Consensus 162 ~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~f 205 (263)
.........+++=++.|++.|...++-.+.+||+ ++.+.+.+
T Consensus 304 -~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 345 (394)
T PRK10213 304 -DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-AEKAGSIQ 345 (394)
T ss_pred -hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-HHHHHHHH
Confidence 1122233444455567899999998777888865 33444443
No 38
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.76 E-value=2.8e-06 Score=80.97 Aligned_cols=200 Identities=10% Similarity=0.078 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCC--------------c-ch-----hh-HH
Q 024717 6 SAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA--------------F-DD-----YR-TS 64 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~--------------~-~~-----~~-~~ 64 (263)
++-.+++..+++++.+. .||+.+|.+..+..++..++....-+|++.+. . .+ .. ++
T Consensus 157 ~~g~~~~~~~~~~l~~~---~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (434)
T PRK11663 157 NVGGALIPLVVGAIALH---YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKE 233 (434)
T ss_pred HHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhh
Confidence 45556666777888775 48999998876655544433332223332100 0 00 00 11
Q ss_pred HH-HHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccC---CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCch
Q 024717 65 FF-TYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE 140 (263)
Q Consensus 65 ~~-~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~---~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~ 140 (263)
.+ ..+.+||+++.+.+...++... +..+..|.|.+..+ -+...-|++.+.+.++.++|+.+.+++..+-.+ +..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~-~~r 311 (434)
T PRK11663 234 ILTKYVLLNPYIWLLSFSYVLVYVV-RAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFN-GNR 311 (434)
T ss_pred hHHHHHhcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc-CCc
Confidence 12 2367899999888776665544 44566799988642 234456888888889999999999988753100 111
Q ss_pred hHHHHH----HHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhh--HHHHHHHhcCCCchhHHHHHHhHHHHHHHHH
Q 024717 141 DCLLYA----FVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILP--SLARLRTMYVPNELRGGMISLSLAPANAAIL 214 (263)
Q Consensus 141 ~~l~~~----~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P--~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~ 214 (263)
+.+... ......++.. .+..+. ..... +.+-.+.+...| .....-.++.|++.|++++++.+.-.|+--.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 387 (434)
T PRK11663 312 GPMNLIFAAGILLSVGSLWL--MPFASY-VMQAA-CFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAA 387 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHH--cccccH-HHHHH-HHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHH
Confidence 111111 1111122211 121111 11111 122223333334 2345567889999999999999999888543
No 39
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.75 E-value=2.9e-06 Score=81.39 Aligned_cols=186 Identities=9% Similarity=0.075 Sum_probs=100.0
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCCCC----C----------------cch-hhHHH-HHHHhcChhHHHHHHHHH
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENPKM----A----------------FDD-YRTSF-FTYIFGDKRIWLLVLAQA 83 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~----~----------------~~~-~~~~~-~~~i~~d~~il~lg~~qs 83 (263)
.||+.+|.+..++.++..++....-+|++.+ + .++ ..++. ...+.+||+++.+.+...
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANV 263 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHH
Confidence 4888899886666555544443323333211 0 000 01111 234789999999888888
Q ss_pred HHHHHHHHHHHhhhhhhccCC---CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh-hc
Q 024717 84 CLQFSIALFWILWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII-AY 159 (263)
Q Consensus 84 lfEgsmy~FVf~WTP~L~~~~---~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~-~~ 159 (263)
+.....|.+. .|.|.+.++. +...-|++.+.++++..+|+.+.+.+..+..+-+..........+.++++... ..
T Consensus 264 ~~~~~~~~~~-~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~ 342 (452)
T PRK11273 264 FVYLLRYGIL-DWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN 342 (452)
T ss_pred HHHHHHHHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 8887777654 5889886532 23456778888888888888888888753110011111111111111111111 11
Q ss_pred cchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 160 DYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 160 ~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+.........+.+++-....-..+.+...-.++.|++.|+++++++..-.|+.
T Consensus 343 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 395 (452)
T PRK11273 343 PAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG 395 (452)
T ss_pred cccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHH
Confidence 11111111122222222211112333445568999999999999998777774
No 40
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.72 E-value=1.2e-05 Score=75.67 Aligned_cols=195 Identities=10% Similarity=0.057 Sum_probs=112.9
Q ss_pred HHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC--Cc--ch--hhHHHHHHHhcChhHHHHHHHHH
Q 024717 10 IGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM--AF--DD--YRTSFFTYIFGDKRIWLLVLAQA 83 (263)
Q Consensus 10 I~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~--~~--~~--~~~~~~~~i~~d~~il~lg~~qs 83 (263)
+.+..+++++++. .|+..+++....+..++.++....++|.+.+ ++ .+ ..++.++.+++||+++.+.+...
T Consensus 156 ~~g~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T TIGR00897 156 VFGSYYSSYAIPA---FGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRI 232 (402)
T ss_pred HHHHHHHHhcccc---cchHHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHH
Confidence 4456667777775 4766777776665555555444444433211 11 11 11234667899999998887766
Q ss_pred HHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHH-HHHHHHH---HHH-HH
Q 024717 84 CLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLL-YAFVVLG---FVF-SI 156 (263)
Q Consensus 84 lfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~-~~~~~~a---~~l-~~ 156 (263)
+.....|.+ ..|.|.+.+ +-+..+.|.+.+.+.++..+|+.+.+++.. |++.++.+. ...+..+ .++ ..
T Consensus 233 ~~~~~~~~~-~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d---r~~~~~~~~~~~~l~~~~~~~~l~~~ 308 (402)
T TIGR00897 233 INTIGLFGF-AVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGD---KLGWMNTVRWFGGVGCGIFTLALYYI 308 (402)
T ss_pred HHHHHHHHH-HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH---hhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 655555554 458898865 334556788889999999999999998875 344333332 2222112 111 11
Q ss_pred hhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 157 IAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 157 ~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
+.....+........+++=.+.|...|.. ....+. ++++|+++++++..--++..
T Consensus 309 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~-~~~~~g~~~g~~~~~~~lg~ 363 (402)
T TIGR00897 309 PQHFGHSFAVALIIAIALGIFLAGYVPLA-AVFPTL-APKHKGAAMSVLNLSAGLSA 363 (402)
T ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHhh-CcchhHHHHHHHHHHHHHHH
Confidence 21111111122233444445555555654 444555 45689999999888777754
No 41
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.71 E-value=1e-05 Score=75.53 Aligned_cols=235 Identities=12% Similarity=0.033 Sum_probs=122.9
Q ss_pred HHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHHHHHHH
Q 024717 10 IGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSI 89 (263)
Q Consensus 10 I~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qslfEgsm 89 (263)
.++..+++++.+. .||+.+|.......++..+.....-+|+. +++++..++.+ ...+|++.+.+-....+.+..+
T Consensus 141 ~~g~~l~~~l~~~---~gwr~~f~~~~~~~~~~~~~~~~~lp~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 215 (382)
T PRK10091 141 LLGIPLGTYLSQE---FSWRYTFLLIAVFNIAVLASIYFWVPDIR-DEAKGGLREQF-HFLRSPAPWLIFAATMFGNAGV 215 (382)
T ss_pred HHhccHHHHHhhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCCC-cccccCHHHHH-HHhcChHHHHHHHHHHHHHHHH
Confidence 3344556677664 48999999988777766665554334432 32111112223 3567887777666555555444
Q ss_pred HHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHH-hhccchhhHH
Q 024717 90 ALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI-IAYDYQEIGI 166 (263)
Q Consensus 90 y~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~-~~~~~~~~~~ 166 (263)
+.......|.+.+ +.++...|++.+.+.++.++|+.+.+++.. |.++++.+.....+.++++.. ...++.. ..
T Consensus 216 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~---r~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~ 291 (382)
T PRK10091 216 FAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSG---RYSPLRIAAVTDFIIVLALLMLFFFGGMK-TA 291 (382)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecc---ccCchhHHHHHHHHHHHHHHHHHHHHhhH-HH
Confidence 4322222344433 334556889999999999999999998864 566666666665555543322 2212211 12
Q ss_pred HHHHHHHHHHHh-HhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHH-HHHhhhhcc-ccchhHHHHHHHHHHHHHH
Q 024717 167 LVALFCLFHACV-GLILPSLARLRTMYVPNELRGGMISLSLAPANAAILL-FLLLRGFYR-NIENAAMVAFAALGLFIAA 243 (263)
Q Consensus 167 ~~~~Fc~fE~~v-G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~-~l~~g~~~~-~~~~~~~~~~~~~~l~l~~ 243 (263)
.+...++.-... |...|....+..+..|+|.++..++ +.-.++--.+ -...|-..+ +.+-+..+..+.....+.+
T Consensus 292 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~ 369 (382)
T PRK10091 292 SLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGG--QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAM 369 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHH--HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHH
Confidence 233333444433 4444445455556667777776532 2222222111 111121111 1222334444444555566
Q ss_pred HHHHHHHHhcCC
Q 024717 244 GCMHVLKRWGKQ 255 (263)
Q Consensus 244 ~~~~~~~~~~~~ 255 (263)
++.-.+.+.|+|
T Consensus 370 ~~~~~~~~~~~~ 381 (382)
T PRK10091 370 SSLLLYGRYKRQ 381 (382)
T ss_pred HHHHHHhhhhcc
Confidence 666555555544
No 42
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.70 E-value=6.7e-06 Score=76.66 Aligned_cols=189 Identities=11% Similarity=0.004 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHHHHH
Q 024717 8 ALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQF 87 (263)
Q Consensus 8 ~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qslfEg 87 (263)
-..+++.+++++.+. ..+..|+..+..+..+..+ .....+|...+++ .+.....+.+||+... .....++.+
T Consensus 142 g~~~g~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~ 213 (381)
T PRK03633 142 GTVLGQLLVSKVSTE---LMSVLPWVTGLVLAAILPL-LFTRILNQQAENH---DSTSIWPMLKLRQARL-GVNGCIISG 213 (381)
T ss_pred HHHHHHHHHhccccc---ccchHHHHHHHHHHHHHHH-HHhcccCCCCCCC---CCCCHHHHHHhcchHH-HHHHHHHHH
Confidence 344556666666654 2445676655444332222 2222233221111 1123455677877654 333344555
Q ss_pred HHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhH
Q 024717 88 SIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIG 165 (263)
Q Consensus 88 smy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~ 165 (263)
..+...+.|.|.+.+ +.++...|++.+.+.+...+|+...+++.. |.+.++.+.....+.+++..... ...
T Consensus 214 ~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d---r~~~~~~l~~~~~~~~~~~~~~~-~~~--- 286 (381)
T PRK03633 214 IVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLAD---RFGRLLVLRVQVFVVILGSIAML-SQA--- 286 (381)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHH---HcCcHHHHHHHHHHHHHHHHHHh-hhH---
Confidence 555556667888765 233445788888888899999988888875 45666666655544443332211 111
Q ss_pred HHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 166 ILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 166 ~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
...++..++=.+.+..+|....+-.+.+|+|++++.++.+..--|+
T Consensus 287 ~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (381)
T PRK03633 287 AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTV 332 (381)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 1122333333344567899999999999999988888887555554
No 43
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.67 E-value=9.6e-06 Score=77.46 Aligned_cols=194 Identities=12% Similarity=0.038 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc--chhhH---HHHHHHhcChhHHHHHHH
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF--DDYRT---SFFTYIFGDKRIWLLVLA 81 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~--~~~~~---~~~~~i~~d~~il~lg~~ 81 (263)
+-.++++++++.+.. .+...||.++.++.++..++....-+++..+++ .+..+ .....++|||+.+.+-+.
T Consensus 141 lG~~ig~~l~g~l~~----~~~~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 216 (418)
T TIGR00889 141 IGFIAAMWAVSLLDI----ELSNIQLYITAGSSALLGVFALTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFF 216 (418)
T ss_pred HHHHHHHHHHHHhcc----cchhHHHHHHHHHHHHHHHHHhcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHH
Confidence 334556666665522 122358888887777777665544333222211 11111 124468899998777666
Q ss_pred HHHHHHHHHHHHHhhhhhhcc-CCC--------CCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH
Q 024717 82 QACLQFSIALFWILWAPTLVA-DGR--------EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF 152 (263)
Q Consensus 82 qslfEgsmy~FVf~WTP~L~~-~~~--------~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~ 152 (263)
..+.............+.+.+ +.+ ....|++.+..+++..++-...+++.. |++.++.+....++.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~d---r~g~r~~l~~~~~~~~v 293 (418)
T TIGR00889 217 SMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLK---RFGIKKVMLLSLVAWAL 293 (418)
T ss_pred HHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHH
Confidence 666544332221222333322 211 134599999999999999888888775 56777777777777666
Q ss_pred HHHHhhccch---hhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHH
Q 024717 153 VFSIIAYDYQ---EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 153 ~l~~~~~~~~---~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
++........ .....+...+++-.+.|.+.|....+-.+..|++.|+++++++..
T Consensus 294 ~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~ 351 (418)
T TIGR00889 294 RFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTL 351 (418)
T ss_pred HHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 5544433211 111122334444455578889999999999999999999999873
No 44
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.67 E-value=1.1e-05 Score=77.20 Aligned_cols=204 Identities=12% Similarity=0.023 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc---c-h--h-------------hHHH
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF---D-D--Y-------------RTSF 65 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~---~-~--~-------------~~~~ 65 (263)
..+-.+++..+++++.+.+ .||+.+|.+..++.++..++.....+|++.++. + + . .+..
T Consensus 176 ~~~g~~i~~~l~~~l~~~~--~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 253 (465)
T TIGR00894 176 FQLGTFIFLPISGWLCESW--GGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLP 253 (465)
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCCC
Confidence 3445566777888887752 499999999887777766655554544432110 0 0 0 0113
Q ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCC--CCCCch
Q 024717 66 FTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGP--SSFRTE 140 (263)
Q Consensus 66 ~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~--~~~~~~ 140 (263)
++.+.+||+++.+.+...+.....|.+. .|.|.+.. +-+...-|+.++...+..++|+.+.+++..+. ++....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~ 332 (465)
T TIGR00894 254 IKAIPKSLPVWAIWFAIFGHFWLYTILP-TYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSL 332 (465)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 6778999999998888877777666554 59998865 23445678888888888888888877765410 111111
Q ss_pred hH---HHHHH--HHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 141 DC---LLYAF--VVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 141 ~~---l~~~~--~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.. +.... .+.+.++.............+..+++.=++.|...|.......++.|+ .+++++++.-..-|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~ 408 (465)
T TIGR00894 333 TAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIG 408 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHH
Confidence 11 11111 111111111111111112233445555566677777777777788776 8999999998888875
No 45
>PRK10054 putative transporter; Provisional
Probab=98.67 E-value=3.4e-06 Score=79.70 Aligned_cols=191 Identities=10% Similarity=0.021 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC-CcchhhHHHHHHHhcChhHHHHHHHHHHH
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-AFDDYRTSFFTYIFGDKRIWLLVLAQACL 85 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~~~~~~~~~~~i~~d~~il~lg~~qslf 85 (263)
+-.+++..+++++.+ .||+.+|....++.+++.+++....+|+..+ ++++......+.+++||+.+.+.+...++
T Consensus 143 lg~~igp~l~~~l~~----~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (395)
T PRK10054 143 IGWTVGPPLGTLLVM----QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATETGSVWSPSVLLQDKALLWFTCSGFLA 218 (395)
T ss_pred HHHHHHHHHHHHHHH----hccCcHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhhhhhccCceehHHHHHHHHH
Confidence 334445567777664 4899999999888888876665534444322 11111112246788999999888888877
Q ss_pred HHHHHHHHHhhhhhhcc--CC---CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhcc
Q 024717 86 QFSIALFWILWAPTLVA--DG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYD 160 (263)
Q Consensus 86 Egsmy~FVf~WTP~L~~--~~---~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~ 160 (263)
......+.. |.|.+.. .+ ++...|++++..-+.........+++.. |.++++.+...+.+.+..+......
T Consensus 219 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~ 294 (395)
T PRK10054 219 SFVSGAFAS-CISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLN---AANIRPLMTAGTLCFVIGLVGFIFS 294 (395)
T ss_pred HHHHHHhhh-hHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHc---cCCchhHHHHHHHHHHHHHHHHHHc
Confidence 776554433 4444432 11 2223466666555444444444445543 3444455555554444333222211
Q ss_pred chhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHh
Q 024717 161 YQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLS 205 (263)
Q Consensus 161 ~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~f 205 (263)
..+......+..++=.+.+.+.|....+-.+..|++.|++.++.+
T Consensus 295 ~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~ 339 (395)
T PRK10054 295 GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQ 339 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHH
Confidence 112122233444555556788899999999999999999998854
No 46
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.66 E-value=7.7e-06 Score=76.80 Aligned_cols=195 Identities=13% Similarity=0.031 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChh-HHHHHHHHHH
Q 024717 6 SAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKR-IWLLVLAQAC 84 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~-il~lg~~qsl 84 (263)
++-.+++-.+++++.+. .||+.+|....+..++..++.....+|...++..+ ++..+...++++ ++..-.+..+
T Consensus 153 ~lg~~~g~~i~~~l~~~---~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 227 (393)
T PRK15011 153 SLAWVIGPPLAYALAMG---FSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLA--TGTLEAPRRNRRDTLLLFVICTL 227 (393)
T ss_pred HHHHHHhhHHHHHHHHh---cChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccc--cccccccccccccHHHHHHHHHH
Confidence 34456667777788775 49999999988877777776665556544322111 011112233433 3333334444
Q ss_pred HHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccc
Q 024717 85 LQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY 161 (263)
Q Consensus 85 fEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~ 161 (263)
..+..+. ...|.|.+.+ +-++...|++.+...++..+++.+.+++.. |++.++.+..........+......+
T Consensus 228 ~~~~~~~-~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK15011 228 MWGTNSL-YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAK---RLGKRFLMRVAAVAGVCFYAGMLMAH 303 (393)
T ss_pred HHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhChHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444443 3458887654 223445677777777777778888888775 45555554443333332222111111
Q ss_pred hhhHHHHHHHHHHH-HHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 162 QEIGILVALFCLFH-ACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 162 ~~~~~~~~~Fc~fE-~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+ ...+..+.... ++.|.+.+.....-.+..|++ |+++++++..=.|+-
T Consensus 304 -~-~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg 352 (393)
T PRK15011 304 -S-PAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVG 352 (393)
T ss_pred -h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHH
Confidence 1 11122222222 345777777766667888865 999999988766663
No 47
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.65 E-value=1.7e-06 Score=80.39 Aligned_cols=137 Identities=19% Similarity=0.186 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHH
Q 024717 73 KRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL 150 (263)
Q Consensus 73 ~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~ 150 (263)
++++.+..+..+.+...+..+..|.|.+.+ +-+...-++..+.+.+..++|+.+.+.+.. |.+.++.+...+.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d---~~~~~~~~~~~~~~~ 359 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVD---RFGRRPLLLIGAAGM 359 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHHHHHHHHHH
Confidence 445555566666666656666778887765 223444577778888888899988888775 445555555555544
Q ss_pred HHHHHHhh---ccchh------hHHHHHHHHHHHHHhHhHh-hHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 151 GFVFSIIA---YDYQE------IGILVALFCLFHACVGLIL-PSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 151 a~~l~~~~---~~~~~------~~~~~~~Fc~fE~~vG~y~-P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+.++.... ..... ....+...+++-.+.|..+ |....+-.+..|++.|++++++...--|+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg 431 (481)
T TIGR00879 360 AICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLA 431 (481)
T ss_pred HHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHH
Confidence 44433322 11111 1223445556666665544 666677799999999999999999888876
No 48
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.65 E-value=2.7e-05 Score=72.50 Aligned_cols=187 Identities=13% Similarity=0.022 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc--chhhHHHHHHHhcChhHHHHHHHHHHH
Q 024717 8 ALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF--DDYRTSFFTYIFGDKRIWLLVLAQACL 85 (263)
Q Consensus 8 ~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~--~~~~~~~~~~i~~d~~il~lg~~qslf 85 (263)
..+.+..+++++.+. .||+..|....++.++..++.....+|+..+++ ++...+.....++||+.+...+...+.
T Consensus 139 ~~~~~~~i~~~l~~~---~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (392)
T PRK10473 139 IPVLAPVLGHLIMLK---FPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAASSKPRENSESLLNRFFLSRLVITTLS 215 (392)
T ss_pred HHHHHHHHHHHHHhC---cChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCccchHHHHHHHHhCHHHHHHHHHHHHH
Confidence 344556667776664 588888988877777666665544456543321 111223455678899887766666665
Q ss_pred HHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccch
Q 024717 86 QFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQ 162 (263)
Q Consensus 86 Egsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~ 162 (263)
....+.+. .|.|.+.. +-++...|.+++...++.++|+.+.+++.. |++.++.+...................
T Consensus 216 ~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~~ 291 (392)
T PRK10473 216 VTVILTFV-NTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALG---IFKPRTLMLTSQVLFLAAGITLALSPS 291 (392)
T ss_pred HHHHHHHH-HhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555443 45665543 234455789999999999999999988874 566666655554443332222222211
Q ss_pred hhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHH
Q 024717 163 EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISL 204 (263)
Q Consensus 163 ~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~ 204 (263)
. ......+.+.-.+.|.-+|.... .+..|+++|+.+.+-
T Consensus 292 ~-~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~g~~~~ 330 (392)
T PRK10473 292 H-AVSLFGITLICAGFSVGFGVAMS--QALGPFSLRAGVASS 330 (392)
T ss_pred H-HHHHHHHHHHHHHHHHHhHHHHH--HHhccCcccccHHHH
Confidence 1 12233444444555666665444 456677777655543
No 49
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.64 E-value=2.9e-05 Score=72.96 Aligned_cols=182 Identities=13% Similarity=0.109 Sum_probs=114.8
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCCCC-C----cchhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENPKM-A----FDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTL 100 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~----~~~~~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L 100 (263)
.||..+|.+..++.++..++.....+|...+ + ++...++.++.+++||+++.+.+...+....++.+- .+.|.+
T Consensus 170 ~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 248 (437)
T TIGR00792 170 FGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKN-GVQVYY 248 (437)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc-chhhee
Confidence 4787888777776666665554444554311 1 111123457788999999988888887777766543 344544
Q ss_pred ccC--CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHh
Q 024717 101 VAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACV 178 (263)
Q Consensus 101 ~~~--~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~v 178 (263)
.+. +++...+.+....+++.++++.+.+++.. |++.++.+.....+.+++.........+........++.-+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 325 (437)
T TIGR00792 249 FTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVK---KFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQ 325 (437)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHH
Confidence 431 23344677777788999999999988875 5666666666555544443333222222222334445555667
Q ss_pred HhHhhHHHHHHHhcCC-------CchhHHHHHHhHHHHHH
Q 024717 179 GLILPSLARLRTMYVP-------NELRGGMISLSLAPANA 211 (263)
Q Consensus 179 G~y~P~m~~Lr~~~Vp-------~e~Ratvm~~fr~PlN~ 211 (263)
|..+|....+-.+.+| ++.++++++++..--++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 365 (437)
T TIGR00792 326 NFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL 365 (437)
T ss_pred HHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH
Confidence 8889999999888887 45678888887765454
No 50
>PRK15075 citrate-proton symporter; Provisional
Probab=98.64 E-value=7.5e-06 Score=78.00 Aligned_cols=177 Identities=12% Similarity=0.022 Sum_probs=103.3
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCCC--CCcch-hhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENPK--MAFDD-YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA 102 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENyg--~~~~~-~~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~ 102 (263)
.||+.||..++....+... ....-+|+.. +++++ ..++.++.+.++++.+..+.+...++...+.++..|.|.+.+
T Consensus 188 ~gWr~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 266 (434)
T PRK15075 188 WGWRIPFLIGCLIVPFIFL-IRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGK 266 (434)
T ss_pred cchHHHHHHHHHHHHHHHH-HHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999986654332221 2111123211 01101 112235556778888877777766777778888999999765
Q ss_pred C---CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHH-H--hhccchhhHHHHHHHHHHHH
Q 024717 103 D---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS-I--IAYDYQEIGILVALFCLFHA 176 (263)
Q Consensus 103 ~---~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~-~--~~~~~~~~~~~~~~Fc~fE~ 176 (263)
+ -++..-+++...+.++..+|+.+.+++.. |++.++.+.....+.+.... . ...+.+........+.++-+
T Consensus 267 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~D---r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK15075 267 TVLHLSAADSLLVTLCVGVSNFIWLPIGGALSD---RIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSF 343 (434)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 2 23334567777777888888888888765 44444544433322221111 0 01111121112222333446
Q ss_pred HhHhHhhHHHHHHHhcCCCchhHHHHHHhH
Q 024717 177 CVGLILPSLARLRTMYVPNELRGGMISLSL 206 (263)
Q Consensus 177 ~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr 206 (263)
+.|.+.|.+...-.+..|++.|++.+++..
T Consensus 344 ~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~ 373 (434)
T PRK15075 344 LYGSYNGAMVVALTEVMPAEVRTAGFSLAY 373 (434)
T ss_pred HHHHHHhhHHHHHHHHCCCCccchheeHHH
Confidence 778888888888899999999999988754
No 51
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.64 E-value=3.8e-06 Score=77.15 Aligned_cols=202 Identities=11% Similarity=0.085 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC--Ccc--hhhHHHHHHHhcC--------
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM--AFD--DYRTSFFTYIFGD-------- 72 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~--~~~--~~~~~~~~~i~~d-------- 72 (263)
+++-.++++.+++.+.+.. +.+|+.+|.++++..+++.+.... .+|.... +++ +..++..+...++
T Consensus 145 ~~~g~~~~~~l~~~l~~~~-~~~w~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (405)
T TIGR00891 145 YAVGAVVAAQVYSLVVPVW-GDGWRALFFISILPIIFALWLRKN-IPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIV 222 (405)
T ss_pred HHHHHHHHHHHHHHHHHhc-CccHHHHHHHHHHHHHHHHHHHHh-CCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhh
Confidence 4455667778888877754 335999999888777766554433 4453211 100 0001111111111
Q ss_pred --------------hhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCC
Q 024717 73 --------------KRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPS 135 (263)
Q Consensus 73 --------------~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~ 135 (263)
+...........+...++..+..|.|.+.. +-+....|++.+.+.+..++|+.+.+++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d--- 299 (405)
T TIGR00891 223 MTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGD--- 299 (405)
T ss_pred hhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 111111122222333333344456676644 334556899999999999999999998875
Q ss_pred CCCchhHHHHHHHHHHH-HHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 136 SFRTEDCLLYAFVVLGF-VFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 136 ~~~~~~~l~~~~~~~a~-~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
|++.++.+.....+.+. .+....... +........++...+.+..+|....+-.++.|+|+|+++++++..--|+.
T Consensus 300 r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 376 (405)
T TIGR00891 300 WLGRRKAYVCSLLAGQLLIIPVFAIGA-NVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLG 376 (405)
T ss_pred HhCchhhhHHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHH
Confidence 45555555444443322 221111221 21222233345556666677777777889999999999999988777764
No 52
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.63 E-value=2e-05 Score=75.82 Aligned_cols=203 Identities=17% Similarity=0.113 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccc--cCCCCCcchhhHHHHHHHhcChhHHHHHHHHH
Q 024717 6 SAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWT--ENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQA 83 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~--ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qs 83 (263)
++.-+++=-++.++-|. +||+++|++-.++.+++.+.+...-+ |+.++.. .........+|+|+++..=++..
T Consensus 147 tlA~v~GvPLGt~ig~~---~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~--~~~~~~~~~l~~p~v~~~l~~t~ 221 (394)
T COG2814 147 TLATVLGVPLGTFLGQL---FGWRATFLAIAVLALLALLLLWKLLPPSEISGSLP--GPLRTLLRLLRRPGVLLGLLATF 221 (394)
T ss_pred HHHHHHhccHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCC--cchhHHHHHhcCchHHHHHHHHH
Confidence 33334444466777776 59999999999999999998888666 2332222 22223557889999999888888
Q ss_pred HHHHHHHHHHHhhhhhhccC--CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccc
Q 024717 84 CLQFSIALFWILWAPTLVAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY 161 (263)
Q Consensus 84 lfEgsmy~FVf~WTP~L~~~--~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~ 161 (263)
++-+.+|.---.=.|.+++. -++...+++--.|=++..+|+.+.+++.. | ++.+.+.......+.++.......
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~d---r-~~~~~l~~~~~l~a~~~l~l~~~~ 297 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLAD---R-GPRRALIAALLLLALALLALTFTG 297 (394)
T ss_pred HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhcc---c-cchhHHHHHHHHHHHHHHHHHHhc
Confidence 88777776666668999873 36778999999999999999999999875 3 555666666555554444332222
Q ss_pred hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCC--CchhHHHHHHhHHHHHHHHHHHHHhh
Q 024717 162 QEIGILVALFCLFHACVGLILPSLARLRTMYVP--NELRGGMISLSLAPANAAILLFLLLR 220 (263)
Q Consensus 162 ~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp--~e~Ratvm~~fr~PlN~~v~~~l~~g 220 (263)
+.....+....+ .--...|....+..+.-+ +|.+..+++++..=.|+-+-..-..|
T Consensus 298 ~~~~~~~~~~~~---wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lG 355 (394)
T COG2814 298 ASPALALALLFL---WGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALG 355 (394)
T ss_pred chHHHHHHHHHH---HHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 221111111111 222334445555555544 58999999999999999775554443
No 53
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.62 E-value=1.5e-05 Score=76.76 Aligned_cols=201 Identities=16% Similarity=0.158 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCC---C-------------CCcc-----hhh-H
Q 024717 6 SAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENP---K-------------MAFD-----DYR-T 63 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENy---g-------------~~~~-----~~~-~ 63 (263)
++-.++++.++.++.+.....+|+.-|+...++.++.+++....-+|+. + ++++ +.. +
T Consensus 168 ~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (467)
T PRK09556 168 NLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKW 247 (467)
T ss_pred chhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHH
Confidence 3445566777777666421235777777744444433333332222221 1 0000 000 1
Q ss_pred H-HHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccC---CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCc
Q 024717 64 S-FFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRT 139 (263)
Q Consensus 64 ~-~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~---~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~ 139 (263)
+ ..+.+++||+++.+.+...+.....+. ...|.|.+.++ -+...-|+..+.+.+...+|+.+.+++.. |++.
T Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsD---r~g~ 323 (467)
T PRK09556 248 QIFVEYVLKNPVIWLLCFANIFLYIVRIG-IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSD---LANG 323 (467)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCC
Confidence 1 123478999999999988888777655 67899987643 23345578888888999999999998875 3333
Q ss_pred hhHHHHHHHHHHHHHHHhhc-cchhhHHHHHHHHHHHHHh-HhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 140 EDCLLYAFVVLGFVFSIIAY-DYQEIGILVALFCLFHACV-GLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 140 ~~~l~~~~~~~a~~l~~~~~-~~~~~~~~~~~Fc~fE~~v-G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
++.+................ ..++......+++++=.++ |... ..+..-.+..|+|.|++++++.+.--|+
T Consensus 324 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~p~~~~g~a~gi~~~~g~l 396 (467)
T PRK09556 324 RRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQL-LIGVAAVGFVPKKAIGVANGIKGTFAYL 396 (467)
T ss_pred CchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHH-HHHHHHHhhcchhhHHHHHHHHHHHHHH
Confidence 33333322222221111111 1112111222333322222 2222 2234556999999999999998887776
No 54
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.61 E-value=4.7e-06 Score=75.70 Aligned_cols=175 Identities=13% Similarity=0.071 Sum_probs=106.5
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCCCCC-c---chhhHHHHHHHhcChh--HHHHHHHHHHHHHHHHHHHHhhhhh
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENPKMA-F---DDYRTSFFTYIFGDKR--IWLLVLAQACLQFSIALFWILWAPT 99 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~-~---~~~~~~~~~~i~~d~~--il~lg~~qslfEgsmy~FVf~WTP~ 99 (263)
.||+.+|....++.+++.++... .+|+..++ + .+..++....+.++++ .+..... .+.+...+..+..|.|.
T Consensus 167 ~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 244 (394)
T TIGR00883 167 WGWRIPFLVSAVLVLIGLYLRRN-LEETPVFEKAQEKHKKKRGPIRETLTKHRKPFLLGLGL-VIATTTTFYLITTYLPT 244 (394)
T ss_pred cchHHHHHHHHHHHHHHHHHHHh-cCCChhHHHHHhccccccCCHHHHHHhchHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 58999999988887776655443 45543221 1 1111223555666655 4444444 44444455555567777
Q ss_pred hcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH-HH--HHHhhccchhhHHHHHHHHH
Q 024717 100 LVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG-FV--FSIIAYDYQEIGILVALFCL 173 (263)
Q Consensus 100 L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a-~~--l~~~~~~~~~~~~~~~~Fc~ 173 (263)
+.+ +.++...|.+.+.+.+...+++.+.+++.. |++.++.+.....+.. .+ +.............+...++
T Consensus 245 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 245 YLTQTLGLSANSALLVLMLSLILFFITIPLSGALSD---RIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH---HhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 653 334566888888888999999988888765 4555554432222222 22 11111111122223445566
Q ss_pred HHHHhHhHhhHHHHHHHhcCCCchhHHHHHHh
Q 024717 174 FHACVGLILPSLARLRTMYVPNELRGGMISLS 205 (263)
Q Consensus 174 fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~f 205 (263)
+..+.|..+|....+-.+.+|+|.|++++++.
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 353 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYTGASLA 353 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceeeEeeeh
Confidence 67777899999999999999999999998873
No 55
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.61 E-value=5.7e-06 Score=78.10 Aligned_cols=189 Identities=14% Similarity=0.100 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCC-----c----chhhHHHHHHHhcChhHH
Q 024717 6 SAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA-----F----DDYRTSFFTYIFGDKRIW 76 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~-----~----~~~~~~~~~~i~~d~~il 76 (263)
++-.+++..+++++.+ .+|..||.+...+.++..++....++|...++ + ++...+....++|||+++
T Consensus 151 ~~g~~i~~~~~g~l~~----~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 226 (420)
T PRK09528 151 SLGWALCAFIAGILFN----INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFW 226 (420)
T ss_pred hHHHHHHHHHHHHHHh----cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeE
Confidence 3444556677777766 37889999988888887777766555443221 0 011123455678899887
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcc------CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHH
Q 024717 77 LLVLAQACLQFSIALFWILWAPTLVA------DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL 150 (263)
Q Consensus 77 ~lg~~qslfEgsmy~FVf~WTP~L~~------~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~ 150 (263)
.+.+...+... .|...-.|.|.+.. +.+....|++.+.+.+...+|..+.+++.. |+++++.+....++.
T Consensus 227 ~l~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d---r~g~~~~~~~~~~l~ 302 (420)
T PRK09528 227 FLVLYVIGVAC-FYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIIN---RIGAKNALLLAGTIM 302 (420)
T ss_pred eehHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcchhhHHHHHHH
Confidence 66655444433 23222334444322 112345799999999999999999998875 455556655555544
Q ss_pred HHHHHHhhccchhhHHHHHHHHHHHH-HhHhHhhHHHHHHHhcCCCchhHHHHHH
Q 024717 151 GFVFSIIAYDYQEIGILVALFCLFHA-CVGLILPSLARLRTMYVPNELRGGMISL 204 (263)
Q Consensus 151 a~~l~~~~~~~~~~~~~~~~Fc~fE~-~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~ 204 (263)
+..+....... + ...+....+.+. ..+...+.....-.+..|++.|++.++.
T Consensus 303 ~~~~~l~~~~~-~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 355 (420)
T PRK09528 303 AVRIIGSGFAT-G-PLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLV 355 (420)
T ss_pred HHHHHHHHhcc-c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeee
Confidence 43333222111 1 112222222222 2244555555666777899999988654
No 56
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.56 E-value=1.3e-05 Score=72.36 Aligned_cols=194 Identities=10% Similarity=0.061 Sum_probs=110.5
Q ss_pred HHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC-----------Cc-------c----hhhHHHHHHHhc
Q 024717 14 VLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-----------AF-------D----DYRTSFFTYIFG 71 (263)
Q Consensus 14 ~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-----------~~-------~----~~~~~~~~~i~~ 71 (263)
+++..+.+. .||+.+|.....+.++..++.....+|+..+ ++ + +..+...+.+++
T Consensus 138 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (379)
T TIGR00881 138 LVLFGIAEL---YSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLL 214 (379)
T ss_pred HHHHHHHhc---CCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHh
Confidence 344455553 5888999887766666555555444443210 00 0 001123566789
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHH-
Q 024717 72 DKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAF- 147 (263)
Q Consensus 72 d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~- 147 (263)
||+++.+.+...+.....+.+ ..|.|.... +-++...|++++.+.+...+|+.+.+++..+..+ +....+....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~-~~~~~~~~~~~ 292 (379)
T TIGR00881 215 NKVLWYISLGYVFVYVVRTGI-LDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFN-GRRGPLAVFFM 292 (379)
T ss_pred cchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcC-CcchHHHHHHH
Confidence 999988888777666655544 456666543 2345567899999999999999988887652111 1111121111
Q ss_pred HHHHHHHHHhhc-cchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 148 VVLGFVFSIIAY-DYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 148 ~~~a~~l~~~~~-~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.....++..... +.............+-.+.+...+....+-.+.+|+|+|+++++++..--++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 358 (379)
T TIGR00881 293 ALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLG 358 (379)
T ss_pred HHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhh
Confidence 111122222111 11111122233334444444556666778899999999999999987666654
No 57
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.54 E-value=9.5e-06 Score=78.97 Aligned_cols=201 Identities=10% Similarity=0.011 Sum_probs=126.2
Q ss_pred hHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcc--hhhH-------------------
Q 024717 5 ESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFD--DYRT------------------- 63 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~--~~~~------------------- 63 (263)
.++-.+++..+++++.+. .||+++|...+++.++..++.....+|+..++.+ |...
T Consensus 140 ~~~g~~~gp~lgg~l~~~---~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~ 216 (495)
T PRK14995 140 GSGGAAFGPLVGGILLEH---FYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTAL 216 (495)
T ss_pred HHHHHHHHHHHHHHhhcc---CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhcc
Confidence 334456677888888886 5999999999988888877776656665433211 1100
Q ss_pred ----HH---------------------H--------HHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCC
Q 024717 64 ----SF---------------------F--------TYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREV 107 (263)
Q Consensus 64 ----~~---------------------~--------~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~ 107 (263)
+. . ..+++||+.....+...+.-..++.+.+ +.|...+ +-+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lq~v~g~s~~ 295 (495)
T PRK14995 217 KGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFEL-LMAQELQFVHGLSPL 295 (495)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHH
Confidence 00 0 1345666655544444444444444433 5554433 44566
Q ss_pred chHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh-hcc-chhhHHHHHHHHHHHHHhHhHhhHH
Q 024717 108 HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII-AYD-YQEIGILVALFCLFHACVGLILPSL 185 (263)
Q Consensus 108 plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~-~~~-~~~~~~~~~~Fc~fE~~vG~y~P~m 185 (263)
.-|+....++++..+++.+.+.+.. |.+.++.+....++.++.+... ... ..+........++.-+..|+.+|..
T Consensus 296 ~ag~~~~~~~~~~~~~~~~~g~l~~---r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~ 372 (495)
T PRK14995 296 EAGMFMLPVMVASGFSGPIAGILVS---RLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLAS 372 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHH
Confidence 7899999999999999999999886 4555555555554444333221 111 1111122334455556669999988
Q ss_pred HHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 186 ARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 186 ~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.....+.+|+|+|+++++++..=-|+-
T Consensus 373 ~~~~~~~~~~~~~g~~~~~~~~~~~lG 399 (495)
T PRK14995 373 TSAIMAAAPPEKAAAAGAIETMAYELG 399 (495)
T ss_pred HHHHHhcCCHHhcchHHHHHHHHHHHH
Confidence 888899999999999999877665554
No 58
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.54 E-value=6.3e-06 Score=75.22 Aligned_cols=138 Identities=14% Similarity=0.048 Sum_probs=90.8
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchh
Q 024717 65 FFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED 141 (263)
Q Consensus 65 ~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~ 141 (263)
....+++||+.+.+.+...+..+..+.+ ..|.|.+.+ +-++...|++.+.+.++.++|..+.+.+.. |++.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~---r~g~~~ 292 (366)
T TIGR00886 217 DQLKVFRDRHTWILALLYSVTFGSFLGV-SSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISD---RLGGAR 292 (366)
T ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHH---hhccch
Confidence 4556788999988888777766665554 456666654 334566788888898999999888887764 455545
Q ss_pred HHHHHHHHHHHHHHHhhc--cch-hhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHH
Q 024717 142 CLLYAFVVLGFVFSIIAY--DYQ-EIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 142 ~l~~~~~~~a~~l~~~~~--~~~-~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
.+...+...+.+...... ..+ +....+..+.++....|+..+....+..++.| ++|+++++++..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~ 360 (366)
T TIGR00886 293 KLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGA 360 (366)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHH
Confidence 444444443333322221 111 22234455666777778888888888888887 699999998764
No 59
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.51 E-value=1.7e-05 Score=75.47 Aligned_cols=200 Identities=13% Similarity=0.045 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhH----------------------
Q 024717 6 SAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRT---------------------- 63 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~---------------------- 63 (263)
.+..+++..+++++.+. .||++.|....++.++..++.....+|+..++.++...
T Consensus 136 ~~g~~~g~~~~~~l~~~---~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~ 212 (485)
T TIGR00711 136 LVAPALGPTLGGWIIEN---YHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPE 212 (485)
T ss_pred HHHhhhhhccHhHhccC---cCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCC
Confidence 33445566777888775 58999999988777777766655444433211100000
Q ss_pred -----H----------------------------HHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCC
Q 024717 64 -----S----------------------------FFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREV 107 (263)
Q Consensus 64 -----~----------------------------~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~ 107 (263)
+ .-..+++||+.....+...+.....+.+ ..+.|.+.. +-+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~g~s~~ 291 (485)
T TIGR00711 213 RGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGS-FYLLPLYLQQVLGYTAL 291 (485)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCHH
Confidence 0 0013456777666655555555444443 456777654 23445
Q ss_pred chHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhh--c-cchhhHHHHHHHHHHHHHhHhHhhH
Q 024717 108 HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA--Y-DYQEIGILVALFCLFHACVGLILPS 184 (263)
Q Consensus 108 plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~--~-~~~~~~~~~~~Fc~fE~~vG~y~P~ 184 (263)
.-|++...+.++..+|+.+.+++.. |.+.++.+...+.+.++...... . +..+........++.-++.|..+|.
T Consensus 292 ~~g~~~~~~~~~~~~~~~~~g~l~~---r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~ 368 (485)
T TIGR00711 292 QAGLHILPVGLAPMLSSPIAGRMGD---KIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMP 368 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh---hcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999999999999998864 56666666665555554433322 1 2212122344455666677888888
Q ss_pred HHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 185 LARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 185 m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
....-.+.+|+|+|+++++++..--|+-
T Consensus 369 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g 396 (485)
T TIGR00711 369 LTTIALSGLPPHKIARGSSLSNFTRQLG 396 (485)
T ss_pred HHHHHHhcCCHHHHhHHHHHHHHHHHHH
Confidence 8888888899999999999877665553
No 60
>PRK10133 L-fucose transporter; Provisional
Probab=98.47 E-value=6.4e-05 Score=72.41 Aligned_cols=164 Identities=13% Similarity=0.106 Sum_probs=101.9
Q ss_pred CccchHHH-HHHHHHHHHHHHhcccccCCCCCcch----hhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhh-
Q 024717 27 GVVPSSTA-SVFLSILGIICVSRGWTENPKMAFDD----YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTL- 100 (263)
Q Consensus 27 g~~aPF~~-a~~~l~i~~ili~~~w~ENyg~~~~~----~~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L- 100 (263)
+|+.||.+ ..+..++..++.....+|...++..+ ...+.++.+++||+.+...+.+.++-+..+. ++.|.|.+
T Consensus 207 ~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~l 285 (438)
T PRK10133 207 SVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTA-CWSYLIRYA 285 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 67778864 33333343333333333322221111 1123456788999877655555555544443 33466644
Q ss_pred cc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHH
Q 024717 101 VA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHAC 177 (263)
Q Consensus 101 ~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~ 177 (263)
.+ +-++..-|+.++.+.++.++|+.+.+++.. |+++++.+.....+++..+.+....... ..+..+.+.=++
T Consensus 286 ~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~---r~g~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~glg 360 (438)
T PRK10133 286 VEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLIS---RFAPHKVLAAYALIAMALCLISAFAGGH--VGLIALTLCSAF 360 (438)
T ss_pred hhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCHHHHHHHHHHHHHHHHHHHHHcCCh--HHHHHHHHHHHH
Confidence 22 234555799999999999999999999885 5677777666555554333333222211 236678888899
Q ss_pred hHhHhhHHHHHHHhcCCCc
Q 024717 178 VGLILPSLARLRTMYVPNE 196 (263)
Q Consensus 178 vG~y~P~m~~Lr~~~Vp~e 196 (263)
.|..+|.+..+-.+..|++
T Consensus 361 ~~~i~P~~~s~a~~~~~~~ 379 (438)
T PRK10133 361 MSIQYPTIFSLGIKNLGQD 379 (438)
T ss_pred HHHHHHHHHHHHHcccchh
Confidence 9999999999999998874
No 61
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.45 E-value=7.1e-05 Score=72.71 Aligned_cols=178 Identities=15% Similarity=0.152 Sum_probs=100.0
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCCCC-Cc--------ch----hhHHHHHHHhc-ChhHHHHHHHHHHHHHHHHH
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENPKM-AF--------DD----YRTSFFTYIFG-DKRIWLLVLAQACLQFSIAL 91 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~--------~~----~~~~~~~~i~~-d~~il~lg~~qslfEgsmy~ 91 (263)
.||+.+|.++++..+++.++ ....+|..-. +. ++ ..+..++.+++ +++.+.+...-.++....|.
T Consensus 189 ~gWR~~f~i~~~~~l~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (490)
T PRK10642 189 WGWRIPFFIALPLGIIGLYL-RHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYY 267 (490)
T ss_pred ccHHHHHHHHHHHHHHHHHH-HHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 69999999988776665444 3445554310 00 00 01112444443 45555555444444555566
Q ss_pred HHHhhhhhhccCC---CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH-HHHHHh-hccchhhHH
Q 024717 92 FWILWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG-FVFSII-AYDYQEIGI 166 (263)
Q Consensus 92 FVf~WTP~L~~~~---~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a-~~l~~~-~~~~~~~~~ 166 (263)
.++.|.|.+.++. ++..-+++.+..++...+|+.+.+.+.. |++.++.+....++.. .+.... .........
T Consensus 268 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (490)
T PRK10642 268 MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSD---RFGRRPFVILGSVALFVLAIPAFILINSNVIGL 344 (490)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 6677999876422 2233466677777888888888887764 4444444444332211 111101 111111122
Q ss_pred HHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHH-hHH
Q 024717 167 LVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISL-SLA 207 (263)
Q Consensus 167 ~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~-fr~ 207 (263)
.+.+.+++-++.|..++.+...-.++.|++.|++.+++ +.+
T Consensus 345 ~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~ 386 (490)
T PRK10642 345 IFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNI 386 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHH
Confidence 23444555566677777777777789999999999886 555
No 62
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.40 E-value=3.7e-05 Score=72.17 Aligned_cols=197 Identities=12% Similarity=-0.004 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCC-------CCcch------hhHHHHHHHhcCh
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPK-------MAFDD------YRTSFFTYIFGDK 73 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg-------~~~~~------~~~~~~~~i~~d~ 73 (263)
+-.++++.+...+.+. .||+.+|..++...++...+. ...+|+.. ++.++ ..+..++.+.++|
T Consensus 153 lg~~~~~~l~~~l~~~---~~w~~~f~i~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (426)
T PRK12307 153 IGNIIAAYFMPSFAEA---YGWRAAFFVGLLPVLLVIYIR-ARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRA 228 (426)
T ss_pred HHHHHHHHHHHHHccc---CCHHHHHHHHHHHHHHHHHHH-HHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhc
Confidence 3445556666666664 589999998765554443322 22233321 00000 0011456677777
Q ss_pred hHHHHHH---HHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHH
Q 024717 74 RIWLLVL---AQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFV 148 (263)
Q Consensus 74 ~il~lg~---~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~ 148 (263)
+...... +.....+..+. +..|.|.+.+ +.+....|.+.+.+.++..+|+.+.+.+.. |++.++.+....+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~d---r~~~~~~~~~~~~ 304 (426)
T PRK12307 229 QFPLTLCVFIVLFSIFGANWP-IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCAD---RIGLKKTFSIGLL 304 (426)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHH
Confidence 7644322 22222222222 4457787655 223345688888888999999998888765 4555555555544
Q ss_pred HHHHHHHHh-hccchhhHHHHHHHHHHHH--HhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 149 VLGFVFSII-AYDYQEIGILVALFCLFHA--CVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 149 ~~a~~l~~~-~~~~~~~~~~~~~Fc~fE~--~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
+.++.+... ..+.+. ......+++=. ..+.+.+.....-.+.+|+++|++++|+.+.--++-.
T Consensus 305 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~ 370 (426)
T PRK12307 305 MSFLFIFPLFRIPQDN--YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSG 370 (426)
T ss_pred HHHHHHHHHHHHcccc--HHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHH
Confidence 443322221 122211 11222222221 1122345555566899999999999999877666643
No 63
>PRK09952 shikimate transporter; Provisional
Probab=98.39 E-value=0.00019 Score=68.79 Aligned_cols=174 Identities=12% Similarity=0.082 Sum_probs=94.6
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCCCC--Ccch---h--hHHHHHHHhcChhHHHHHHHHHHH-HHHHHHHHHhhh
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENPKM--AFDD---Y--RTSFFTYIFGDKRIWLLVLAQACL-QFSIALFWILWA 97 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~--~~~~---~--~~~~~~~i~~d~~il~lg~~qslf-Egsmy~FVf~WT 97 (263)
.||+.||.++.+..++... .....+|.... +.++ . +....+.+.++|+.+......... ....|. ...|.
T Consensus 196 ~gWr~~f~~~~~~~l~~~~-l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 273 (438)
T PRK09952 196 WGWRIPFLFSIVLVLIALW-VRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYI-VTAFA 273 (438)
T ss_pred cChHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 5999999998877655433 33333443210 0000 0 011233467888877765543333 344443 45688
Q ss_pred hhhccCCCCCc---hHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh---hccchhhHHHHHHH
Q 024717 98 PTLVADGREVH---LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII---AYDYQEIGILVALF 171 (263)
Q Consensus 98 P~L~~~~~~~p---lGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~---~~~~~~~~~~~~~F 171 (263)
|.+.++..+.+ .+.+...+.+...+|+.+.+++.. |++.++.+....++.+++.... ....+.....+...
T Consensus 274 ~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~D---r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T PRK09952 274 LNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLAD---RFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSI 350 (438)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 88754222222 223333344555666667777764 4555555555444433322111 11111111122334
Q ss_pred HHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHH
Q 024717 172 CLFHACVGLILPSLARLRTMYVPNELRGGMISL 204 (263)
Q Consensus 172 c~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~ 204 (263)
++.-.+.|...|.+..+-.|..|.|.|++.+++
T Consensus 351 ~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~ 383 (438)
T PRK09952 351 MLANIAHDMVVCVQQPMFTEMFGASYRYSGAGV 383 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhH
Confidence 445566788899999999999999999999887
No 64
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.39 E-value=1.9e-05 Score=72.86 Aligned_cols=188 Identities=12% Similarity=0.006 Sum_probs=120.9
Q ss_pred hhhHHHHHHHHHHHHHHhhhcc-------------cCCccchHH-HHHHHHHHHHHHHhccccc-CCCCCcc--hhhHHH
Q 024717 3 FFESAALIGGQVLANWLVGIDV-------------KKGVVPSST-ASVFLSILGIICVSRGWTE-NPKMAFD--DYRTSF 65 (263)
Q Consensus 3 ~~ns~~AI~aG~~a~~lv~~~~-------------~~g~~aPF~-~a~~~l~i~~ili~~~w~E-Nyg~~~~--~~~~~~ 65 (263)
.+|++-++++-++++.+..... ...|+.||. +++++.++..++....-+| +..+++. +.+...
T Consensus 53 ~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~ 132 (310)
T TIGR01272 53 AFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGDTTQ 132 (310)
T ss_pred HHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccccccccc
Confidence 4688888888888888774210 036788999 6666666665544432222 2211110 001112
Q ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccCC-----CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCch
Q 024717 66 FTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG-----REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE 140 (263)
Q Consensus 66 ~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~~-----~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~ 140 (263)
.+.++++|++++..+.+.++.+ .-.-+-.|.|.+..+. ++..-++.++.|..++++|..+.+++.. |++++
T Consensus 133 ~~~~~~~~~~~l~~~~~f~yvg-~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~---r~g~~ 208 (310)
T TIGR01272 133 KTSAFQFTHLVLGALGIFVYVG-AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMP---MISQG 208 (310)
T ss_pred hhhHHhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCHH
Confidence 2356778887765555544433 2334456888876532 3455799999999999999999999985 67877
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCc
Q 024717 141 DCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNE 196 (263)
Q Consensus 141 ~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e 196 (263)
+.+.....++.+........+. ....++++++=.++|..||....+-.+..|++
T Consensus 209 ~~l~~~~~l~~~~~~l~~~~~~--~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~ 262 (310)
T TIGR01272 209 RYLAFNAFLAVLLSIGAALTHG--YVAMWFVLALGLFNSIMFPTIFSLALNALGRH 262 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 7777666555544333322222 23456788888999999999999999998875
No 65
>TIGR00898 2A0119 cation transport protein.
Probab=98.36 E-value=9.8e-05 Score=71.20 Aligned_cols=139 Identities=13% Similarity=0.048 Sum_probs=82.8
Q ss_pred HHHHhcChhHHHHHHHHHHHHHH---HHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhH
Q 024717 66 FTYIFGDKRIWLLVLAQACLQFS---IALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDC 142 (263)
Q Consensus 66 ~~~i~~d~~il~lg~~qslfEgs---my~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~ 142 (263)
+..+++||++....+...+.... .|.....|.|.+ +.+ ..+....+.+....|..+...+.. |++.++.
T Consensus 316 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~i~~~~~~~~l~d---r~grr~~ 387 (505)
T TIGR00898 316 FLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNL--GGN---IYLDLFISGLVELPAKLITLLLID---RLGRRYT 387 (505)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhcccccc--CCC---hHHHHHHHHHHHHHHHHHHHHHHH---HhCCHHH
Confidence 45677888877665554443322 233334455544 111 223333334445556666555553 4555566
Q ss_pred HHHHHHHHHHHHHHhh-ccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 143 LLYAFVVLGFVFSIIA-YDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 143 l~~~~~~~a~~l~~~~-~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+....++.++++.... .+...........++.-.+.+..+|.+...-.+..|++.|++++++...--++.
T Consensus 388 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig 458 (505)
T TIGR00898 388 MAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVG 458 (505)
T ss_pred HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHH
Confidence 6666666554443332 232211233455667778888899999999999999999999999987766554
No 66
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.36 E-value=7.3e-05 Score=72.11 Aligned_cols=200 Identities=12% Similarity=0.041 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhccccc--CCC------------C-Ccch----hhHHH--
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTE--NPK------------M-AFDD----YRTSF-- 65 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~E--Nyg------------~-~~~~----~~~~~-- 65 (263)
+....++.+++++.+. .||+.+|.+..++.+++.+......++ ++. + +.++ ...+.
T Consensus 154 ~g~~~~~~l~~~l~~~---~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (455)
T TIGR00892 154 VFLSTLAPLNQYLFES---FGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKIN 230 (455)
T ss_pred HHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhh
Confidence 3344556677788776 489999999888777665544432221 100 0 0000 00001
Q ss_pred -H--HHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCch
Q 024717 66 -F--TYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE 140 (263)
Q Consensus 66 -~--~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~ 140 (263)
. ..+++||+.+.......+.....+ .+..|.|.+.. +-++...|++.+.+-+...+++.+.+++..+ .+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~ 308 (455)
T TIGR00892 231 RFLDFSLFTHRGFLVYLSGNVIMFLGFF-APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGL-KWIRPH 308 (455)
T ss_pred hhcchHHhcCchHHHHHHHHHHHHHHcc-chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccCHH
Confidence 1 246789988877776655544433 33456666544 2244567888888877777777666666532 123333
Q ss_pred hHHH--HHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 141 DCLL--YAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 141 ~~l~--~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+... ......+.++....... +....+...+++-++.|..+|.+..+-.+++|+++|+++++++..--|+-
T Consensus 309 ~~~~~~~~~~~~~l~~ll~~~~~-~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg 381 (455)
T TIGR00892 309 VQYLFSFALLFNGLTHLLCALAG-DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCA 381 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHH
Confidence 2222 22222222222221111 11122233334445568899999999999999999999999998877775
No 67
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.36 E-value=5.6e-05 Score=70.72 Aligned_cols=189 Identities=10% Similarity=0.052 Sum_probs=111.8
Q ss_pred HHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCC---------cchhhHHHHHHHhcChhHHHHHH
Q 024717 10 IGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA---------FDDYRTSFFTYIFGDKRIWLLVL 80 (263)
Q Consensus 10 I~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~---------~~~~~~~~~~~i~~d~~il~lg~ 80 (263)
+++..+++.+.+ .||+.||.....+.++..+++...-+|..-++ +.+.+.+.+..+++||+++.+..
T Consensus 147 ~~g~~~~g~l~~----~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 222 (396)
T TIGR00882 147 ALCASIAGILFS----IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVL 222 (396)
T ss_pred HHHHHHHhhhhc----cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHH
Confidence 344555666554 48899999988888777766654333321111 01112245678899999887776
Q ss_pred HHHHHHHHHHHHHHhhhhhhccC-----C-CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHH
Q 024717 81 AQACLQFSIALFWILWAPTLVAD-----G-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVF 154 (263)
Q Consensus 81 ~qslfEgsmy~FVf~WTP~L~~~-----~-~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l 154 (263)
...+.. ..|...-.|.|...++ + +....|.+.+...+...++....+++.+ |.++++.+..+.++.++..
T Consensus 223 ~~~~~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~---r~g~~~~l~~~~~l~~l~~ 298 (396)
T TIGR00882 223 YVVGVA-CVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIIN---RIGAKNALLIAGTIMSVRI 298 (396)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccchhHHHHHHHHHHHH
Confidence 665554 3444444467766441 1 1234688888888888888888877765 4566666666555544433
Q ss_pred HHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcC----CCchhHHHHHH-hHHHHHH
Q 024717 155 SIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYV----PNELRGGMISL-SLAPANA 211 (263)
Q Consensus 155 ~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~V----p~e~Ratvm~~-fr~PlN~ 211 (263)
....... + .+.+.+.+...|+..|.....-.+++ |++.|+|..+. +..--++
T Consensus 299 ~~~~~~~-~----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l 355 (396)
T TIGR00882 299 IGSSFAT-T----ALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL 355 (396)
T ss_pred HHHHhcC-C----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH
Confidence 3322211 1 33344556677787888765444444 66777776655 5544444
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.35 E-value=6.4e-05 Score=69.04 Aligned_cols=194 Identities=9% Similarity=0.012 Sum_probs=109.2
Q ss_pred HHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHHHHHHH
Q 024717 10 IGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSI 89 (263)
Q Consensus 10 I~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qslfEgsm 89 (263)
.++..++..+++.. +.+|+..|...+++.+++........ ++..+++++..+.....++|||+.+.+.+...+.-..
T Consensus 136 ~i~~~~~~~l~~~~-~~~w~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 212 (355)
T TIGR00896 136 ALAAAATVPLAQHS-GGHWQQALAWWALPALLALLAWIPQV-RRRVAANQTTTRLTPVRIWRSPLAWQVTVFFGLQSGL- 212 (355)
T ss_pred HHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHhhhh-ccccCCCCCCCCCCCchhhcCHhHHHHHHHHHHHHHH-
Confidence 34445566666653 23477777765554444333222111 1111111111112345678899988877666554444
Q ss_pred HHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCc-hhHHHHHHHHHHHHHHHhhccchhhHH
Q 024717 90 ALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRT-EDCLLYAFVVLGFVFSIIAYDYQEIGI 166 (263)
Q Consensus 90 y~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~-~~~l~~~~~~~a~~l~~~~~~~~~~~~ 166 (263)
|..+..|.|.+.+ +.+....|++.+.+.+..++|+.+.+++.. |.+. +..+....++.+.++.......++ ..
T Consensus 213 ~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~d---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 288 (355)
T TIGR00896 213 YYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALAR---RVKDQRGIVAVLAVLQLVGLCGLLFAPMH-GL 288 (355)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHh---hhccchHHHHHHHHHHHHHHHHHHHhhhh-HH
Confidence 3345678888765 334456789999999999999999998864 4432 233434333333333222222211 11
Q ss_pred HHHHHHHHHHHhHhHhhHHHHHHHhc-CCCchhHHHHHHhHHHHHH
Q 024717 167 LVALFCLFHACVGLILPSLARLRTMY-VPNELRGGMISLSLAPANA 211 (263)
Q Consensus 167 ~~~~Fc~fE~~vG~y~P~m~~Lr~~~-Vp~e~Ratvm~~fr~PlN~ 211 (263)
.....++-+..|..+|.....-.+. .|+++|++++++.+.--++
T Consensus 289 -~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 333 (355)
T TIGR00896 289 -WAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYL 333 (355)
T ss_pred -HHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 2234566777799999976665544 4567778888886654443
No 69
>PRK10054 putative transporter; Provisional
Probab=98.29 E-value=7.4e-05 Score=70.59 Aligned_cols=140 Identities=14% Similarity=0.104 Sum_probs=93.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHH
Q 024717 73 KRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL 150 (263)
Q Consensus 73 ~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~ 150 (263)
|+.+.+.+.+.+.-...+...-...|.+++ +-++...|++.+.+.+...+++...+++.. |++.++.+.....+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D---r~g~k~~~~~~~~~~ 83 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILAD---KFDKKRYMLLAITAF 83 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCcchhHHHHHHHH
Confidence 445555555666555544444444455544 446778999999999999999999998875 455556665555444
Q ss_pred HHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHH
Q 024717 151 GFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 151 a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~ 216 (263)
+++.......+ +....+.++++...+.+.+.|+...+-.|..|+|+|++++++++.=.|+-..+.
T Consensus 84 ~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~ig 148 (395)
T PRK10054 84 ASGFIAIPLVN-NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVG 148 (395)
T ss_pred HHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 43332222222 122234455566666688899999999999999999999999999888764433
No 70
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.29 E-value=0.00025 Score=67.63 Aligned_cols=182 Identities=9% Similarity=0.099 Sum_probs=100.1
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCCCC----C----------------cchhh-HHH-HHHHhcChhHHHHHHHHH
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENPKM----A----------------FDDYR-TSF-FTYIFGDKRIWLLVLAQA 83 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~----~----------------~~~~~-~~~-~~~i~~d~~il~lg~~qs 83 (263)
.||+..|....++.++..++.....+|...+ + +.+.+ ++. .+.+++||+.+.+.+.+.
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANV 261 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHH
Confidence 5899999997777666655554444442210 0 00000 111 234789999999888877
Q ss_pred HHHHHHHHHHHhhhhhhccCC---CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHH-HHHHHHHHh-h
Q 024717 84 CLQFSIALFWILWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFV-VLGFVFSII-A 158 (263)
Q Consensus 84 lfEgsmy~FVf~WTP~L~~~~---~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~-~~a~~l~~~-~ 158 (263)
+.....|.+. .|.|.+.++. +...-|++++.+.+...+|+.+.+++..+..+ +.+........ +...+.... .
T Consensus 262 ~~~~~~~~~~-~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~~~~~~~~~~~~~~~~~~~~~ 339 (438)
T TIGR00712 262 FVYLLRYGVL-DWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFK-GNRGATGVFFMTLVTIAVIVYWM 339 (438)
T ss_pred HHHHHHHHHH-HhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CcccHHHHHHHHHHHHHHHHHHh
Confidence 7777766554 5888887632 33446888888888889998888877652110 11111111111 111111111 1
Q ss_pred ccchhhHHH-HHHHHHHHHHhHhHhhHH--HHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 159 YDYQEIGIL-VALFCLFHACVGLILPSL--ARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 159 ~~~~~~~~~-~~~Fc~fE~~vG~y~P~m--~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+..+.... ...|++- .+++-|.. +.+-.+..|++.|+++++++..--|..
T Consensus 340 ~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 393 (438)
T TIGR00712 340 NPAGNPLVDMICMIVIG---FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG 393 (438)
T ss_pred cCCCchHHHHHHHHHHH---HHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhh
Confidence 111111111 1112222 23334433 345668999999999999998666653
No 71
>PRK10504 putative transporter; Provisional
Probab=98.27 E-value=0.00031 Score=67.08 Aligned_cols=198 Identities=14% Similarity=0.086 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC-Ccchhh------------------------
Q 024717 8 ALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-AFDDYR------------------------ 62 (263)
Q Consensus 8 ~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~~~~~------------------------ 62 (263)
..+++..+++++++. .||++.|...+++..++.++.....+|...+ +..+..
T Consensus 146 g~~~g~~~~g~l~~~---~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (471)
T PRK10504 146 GPLLGPALGGLLVEY---ASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGL 222 (471)
T ss_pred HHHhhhHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCc
Confidence 344555667777775 4899999999888877777665533332211 110000
Q ss_pred -----------------------H---H--HHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHH
Q 024717 63 -----------------------T---S--FFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGL 111 (263)
Q Consensus 63 -----------------------~---~--~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGl 111 (263)
+ + .-..+++||+...+-....+... .+.-...+.|.+.+ +.++...|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~g~ 301 (471)
T PRK10504 223 SPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRI-GSGMLPFMTPVFLQIGLGFSPFHAGL 301 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 0 0 00135677777665444444333 34444556676544 334566788
Q ss_pred HHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH-HHHhhccchhhHHHHHHHHHHH-HHhHhHhhHHHHHH
Q 024717 112 IFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV-FSIIAYDYQEIGILVALFCLFH-ACVGLILPSLARLR 189 (263)
Q Consensus 112 IFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~-l~~~~~~~~~~~~~~~~Fc~fE-~~vG~y~P~m~~Lr 189 (263)
+...+-++.+.+..+.+++.. |+++++.+.....+.++. +.....+.......+...++.+ .+.|+.+|.+..+-
T Consensus 302 ~~~~~~~~~~~~~~~~~~l~~---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 378 (471)
T PRK10504 302 MMIPMVLGSMGMKRIVVQVVN---RFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLT 378 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777777777777777764 566666666555544433 2222222111112223334444 66788999999999
Q ss_pred HhcCCCchhHHHHHHhHHHHHHH
Q 024717 190 TMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 190 ~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+.+|||.|+++++++..--++-
T Consensus 379 ~~~~~~~~~g~~~~~~~~~~~~g 401 (471)
T PRK10504 379 LKDLPDNLASSGNSLLSMIMQLS 401 (471)
T ss_pred HHcCCHHhccchHHHHHHHHHHH
Confidence 99999999999999987766553
No 72
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.24 E-value=0.00023 Score=68.29 Aligned_cols=114 Identities=13% Similarity=0.081 Sum_probs=71.6
Q ss_pred hhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh-hccchhhHHHHHH
Q 024717 95 LWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII-AYDYQEIGILVAL 170 (263)
Q Consensus 95 ~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~-~~~~~~~~~~~~~ 170 (263)
.|.|.+.+ +-+....|++.+.+.++.++|+.+.+++.. +++.++.+.....+.++..... ...... ......
T Consensus 296 ~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~d---r~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 371 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGD---WLGTRKAYVCSLLISQLLIIPVFAIGGAN-VWVLGL 371 (496)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHHHHHHHHHHHHHHHHHhhccccH-HHHHHH
Confidence 46787764 234557899999999999999999999875 4555555554444443332211 122211 122222
Q ss_pred HHHHHHH-hHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 171 FCLFHAC-VGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 171 Fc~fE~~-vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+.+..+ .+...+....+-.++.|+|+|+++++++..-.++.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 414 (496)
T PRK03893 372 LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALG 414 (496)
T ss_pred HHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHH
Confidence 3333222 22235666677789999999999999998877764
No 73
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.23 E-value=0.00011 Score=65.86 Aligned_cols=111 Identities=18% Similarity=0.240 Sum_probs=83.5
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHh
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLIL 182 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~ 182 (263)
+.++...|++.+.+.++..+++.+.+.+.. |++.++.+....++.+++..+..... +.+..+.+-++.-.+.|.++
T Consensus 28 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~ 103 (352)
T PF07690_consen 28 GLSPSQIGLLFSAFFLGSALFSPFAGYLSD---RFGRRRVLIIGLLLFALGSLLLAFAS-NFWLLLIARFLLGIGSGFFS 103 (352)
T ss_dssp TTTSHCHHHHHHHHHHHHHHHHHHHHHHHH---HS-HHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCCeeeEeehhhhhhhHHHHhhhhh-hHHHHhhhcccccccccccc
Confidence 447778999999999999999999999986 56777777777766665533333212 22333444555555568999
Q ss_pred hHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHHH
Q 024717 183 PSLARLRTMYVPNELRGGMISLSLAPANAAILLFL 217 (263)
Q Consensus 183 P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l 217 (263)
|+...+-.++.|+|+|+.++++++.--++-.++.-
T Consensus 104 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 138 (352)
T PF07690_consen 104 PASNALIADWFPPEERGRAFGILSAGFSLGSILGP 138 (352)
T ss_dssp HHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhhhhccccccchhhhhhhccc
Confidence 99999999999999999999999998888654443
No 74
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.22 E-value=0.00019 Score=68.13 Aligned_cols=199 Identities=14% Similarity=0.162 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHhhhc---ccCCccchHHHHHHHHHHHHHHHhcccccCCCCCc------chh---------------
Q 024717 6 SAALIGGQVLANWLVGID---VKKGVVPSSTASVFLSILGIICVSRGWTENPKMAF------DDY--------------- 61 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~---~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~------~~~--------------- 61 (263)
++-.+++..+++++.+.. ...||++.|....+..++..++.....+|++.+.. ++.
T Consensus 142 ~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 221 (412)
T TIGR02332 142 PVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQP 221 (412)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhcccccccc
Confidence 344556667777776420 02589999999776666655555555677763210 000
Q ss_pred ---------h-HHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccC-C---CCCchHHHHHHHHHHHHHhHhhh
Q 024717 62 ---------R-TSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD-G---REVHLGLIFPSLLGARMLGSTVF 127 (263)
Q Consensus 62 ---------~-~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~-~---~~~plGlIFs~FM~~~mlGS~~f 127 (263)
. ++.++.+ .+|+.+...+...+.-...+.+. .|.|.+.++ + +...-|+.++...++..+|+.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~ 299 (412)
T TIGR02332 222 EGAFAHAAMPQRSMLREI-FTPAIMLYTLAYFCLTNTLSAIN-IWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWW 299 (412)
T ss_pred ccccccccccHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHH
Confidence 0 0112333 35777777777777766666654 588888764 1 23456888999999999999999
Q ss_pred hhhhcCCCCCCchh-HHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhH--hhHHHHHHHhcCCCchhHHHHHH
Q 024717 128 PWLISGPSSFRTED-CLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLI--LPSLARLRTMYVPNELRGGMISL 204 (263)
Q Consensus 128 ~~l~~~~~~~~~~~-~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y--~P~m~~Lr~~~Vp~e~Ratvm~~ 204 (263)
+++.. |++..+ .+...+...++.+.......+. ...+.+++++ +.|.. .|.......+..|+|+|++++++
T Consensus 300 g~l~d---r~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~ 373 (412)
T TIGR02332 300 SRHSD---RLKERKHHTALPYLFAAAGWLLASATDHN-LIQLLGIIMA--SMGSFSAMAIFWTTPDQSISLQARAIAIAV 373 (412)
T ss_pred HHHhc---ccCccHHHHHHHHHHHHHHHHHHHhcCCH-HHHHHHHHHH--HHHhhhhhhHHHhhcccccchHHHHHHHHH
Confidence 98875 343323 2222333333333222222211 1222222222 23332 34444555678999999999999
Q ss_pred hHHHHHHH
Q 024717 205 SLAPANAA 212 (263)
Q Consensus 205 fr~PlN~~ 212 (263)
...=-|+-
T Consensus 374 ~~~~~~~g 381 (412)
T TIGR02332 374 INATGNIG 381 (412)
T ss_pred HHHhhhhh
Confidence 88766653
No 75
>PRK03545 putative arabinose transporter; Provisional
Probab=98.12 E-value=0.00018 Score=67.12 Aligned_cols=137 Identities=16% Similarity=0.109 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH
Q 024717 74 RIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG 151 (263)
Q Consensus 74 ~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a 151 (263)
.++.+.+.+-++....|... .-.|.+.+ +.+....|++.+.+++...+++...+.+.. |.+.++.+.....+.+
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~-~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 10 RVVTLALAAFIFNTTEFVPV-GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTS---NVERRKLLIGLFVLFI 85 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHH-cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc---CCChHHHHHHHHHHHH
Confidence 46666666666555544332 12466655 456778999999999999999999998764 6777777777666655
Q ss_pred HHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHH
Q 024717 152 FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILL 215 (263)
Q Consensus 152 ~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~ 215 (263)
++.......+ +....+..-++.=...|.++|....+-.++.|+|+|+.++++++.=.|+-.++
T Consensus 86 ~~~~~~~~~~-~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~i 148 (390)
T PRK03545 86 ASHVLSALAW-NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVL 148 (390)
T ss_pred HHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHH
Confidence 4433332211 11111222222222336788999999999999999999999999877775433
No 76
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.12 E-value=0.00087 Score=65.05 Aligned_cols=243 Identities=16% Similarity=0.131 Sum_probs=134.2
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCC-----C----CcchhhHHHHHHHhcChh
Q 024717 4 FESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPK-----M----AFDDYRTSFFTYIFGDKR 74 (263)
Q Consensus 4 ~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg-----~----~~~~~~~~~~~~i~~d~~ 74 (263)
|.|+--+++-.++|.+.+. +|...|+++....++-.++.....+|+.. | ++.+.+.++...++|||+
T Consensus 146 wGSig~ai~s~~~G~L~~i----~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~ 221 (412)
T PF01306_consen 146 WGSIGFAIASLLAGILFNI----NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRN 221 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHH
T ss_pred HhhHHHHHHHHHhheeeee----CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchh
Confidence 4566666777778888774 56678998776666665655554432211 1 111222345678999999
Q ss_pred HHHHHHHHHHHHHHHHHH----HHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHH
Q 024717 75 IWLLVLAQACLQFSIALF----WILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVV 149 (263)
Q Consensus 75 il~lg~~qslfEgsmy~F----Vf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~ 149 (263)
.+.+.+.-...++.-+.| --.|+-...+ +..+.=.|..-+.=-++=.+.=.+.+++.+ |.++++.|.++..+
T Consensus 222 fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~---rig~k~~Lllag~i 298 (412)
T PF01306_consen 222 FWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLIN---RIGAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHH---hcChHhHHHHHHHH
Confidence 988877433333333333 2222222211 111223677666655555555556677774 68888888777666
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHHHHh----HhHhhHHHHHHHhcCCCchhHHHHHH-hHHHHHHHH-HHHHHhhhhc
Q 024717 150 LGFVFSIIAYDYQEIGILVALFCLFHACV----GLILPSLARLRTMYVPNELRGGMISL-SLAPANAAI-LLFLLLRGFY 223 (263)
Q Consensus 150 ~a~~l~~~~~~~~~~~~~~~~Fc~fE~~v----G~y~P~m~~Lr~~~Vp~e~Ratvm~~-fr~PlN~~v-~~~l~~g~~~ 223 (263)
.++=........+ .+...+.|..= +++.-++.+-=.+..|++..||++.+ ++...-+-. +.....|..|
T Consensus 299 ~~iRi~~~~~~~~-----~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ly 373 (412)
T PF01306_consen 299 MAIRIIGSGFATN-----PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLY 373 (412)
T ss_dssp HHHHHHHHHT--S-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhH
Confidence 6533222221211 33455555555 45555666777788899999999998 688887764 3344457666
Q ss_pred cccc-hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 024717 224 RNIE-NAAMVAFAALGLFIAAGCMHVLKRWGKQPYQ 258 (263)
Q Consensus 224 ~~~~-~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~ 258 (263)
++++ +.+-+..+...+....-+...+|+-+||-.+
T Consensus 374 d~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~~~ 409 (412)
T PF01306_consen 374 DRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQIVH 409 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTTCC
T ss_pred hhcCcHHHHHHHHHHHHHHHHHheeeecCCCccccc
Confidence 6666 3455555555444444455666555554443
No 77
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.11 E-value=0.00046 Score=71.49 Aligned_cols=98 Identities=20% Similarity=0.190 Sum_probs=70.5
Q ss_pred HHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCC
Q 024717 115 SLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVP 194 (263)
Q Consensus 115 ~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp 194 (263)
...+...+|..+...+.. +++.++.+...+++++++........+. ...+..++++.++.+..+|++...-.++.|
T Consensus 603 l~~l~~i~G~il~g~L~D---r~GRr~~l~~~~~lsai~~ll~~~~~s~-~~ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 603 LGTLAVLPGNIVSALLMD---KIGRLRMLAGSMVLSCISCFFLSFGNSE-SAMIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCCHHHHHHHHHHHHHHHHHHHHHccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344666677777777764 5676777777777777555433222211 234566788899999999999999999999
Q ss_pred CchhHHHHHHhHHHHHHHHHHH
Q 024717 195 NELRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 195 ~e~Ratvm~~fr~PlN~~v~~~ 216 (263)
.+.|++.+++...=-++-.++.
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiig 700 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLG 700 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887777654333
No 78
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.11 E-value=0.00024 Score=65.04 Aligned_cols=115 Identities=14% Similarity=0.068 Sum_probs=78.6
Q ss_pred hhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHH
Q 024717 97 APTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF 174 (263)
Q Consensus 97 TP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~f 174 (263)
.|.+.+ +.++...|++.+.+++...+++.+.+.+.. |.+.++.+.....+.+++.......+ +....+...++.
T Consensus 28 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d---~~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 103 (385)
T TIGR00710 28 FPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSD---RYGRRPVLLLGLFIFALSSLGLALSN-NIETLLVLRFVQ 103 (385)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHH---hcCChHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHH
Confidence 355544 446677999999999999999999998875 45666666665555443333222111 111222333344
Q ss_pred HHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHH
Q 024717 175 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILL 215 (263)
Q Consensus 175 E~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~ 215 (263)
-.+.|...|....+-.++.|+|+|++++++++.-.++...+
T Consensus 104 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 144 (385)
T TIGR00710 104 AFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAV 144 (385)
T ss_pred HcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 44457889999999999999999999999999887775433
No 79
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.10 E-value=0.00025 Score=69.04 Aligned_cols=246 Identities=9% Similarity=-0.076 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCC--CCCc--ch---------------hh--HHH
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENP--KMAF--DD---------------YR--TSF 65 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENy--g~~~--~~---------------~~--~~~ 65 (263)
+-.+++..+++++.+. .||+..|.+...+.++..+. ...++|.. ..+. ++ .. .+.
T Consensus 169 ~G~~vg~~l~G~l~~~---~~~~~~f~~~a~l~ll~~~~-~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (468)
T TIGR00788 169 TGGLISSLLGGPLLDK---TLTRILFLITAALLLLQLFV-SNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILG 244 (468)
T ss_pred HHHHHHHHHHHHHHHh---cCcchHHHHHHHHHHHHHHH-HHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHH
Confidence 4567777888888886 48999998888777777443 44467743 1111 00 00 123
Q ss_pred HHHHhcChhHHHHHHHHH----HHHHHHHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchh
Q 024717 66 FTYIFGDKRIWLLVLAQA----CLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED 141 (263)
Q Consensus 66 ~~~i~~d~~il~lg~~qs----lfEgsmy~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~ 141 (263)
+...+++|+++..-+.-. ..++.+..+ |++.|.. .+.+....|+++....++.++|..+++++.. +.+..+
T Consensus 245 l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~-f~~~~~~-lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~---~~~~r~ 319 (468)
T TIGR00788 245 LRGAIQLLEIAKPLIFIFLSYANLPGASGSV-FCATTQC-LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLK---TFPYRL 319 (468)
T ss_pred HHHHHhcHHHHHHHHHHHHHHhhcCCCCcee-EEEEccc-CCCCcchhhhHHHHHHHHHHHHHHHHHHHHh---hCCHHH
Confidence 444567777755222111 222222222 1233321 1335666899999999999999999999874 456666
Q ss_pred HHHHHHHHHHHHHHHhh-c---cc-----hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 142 CLLYAFVVLGFVFSIIA-Y---DY-----QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 142 ~l~~~~~~~a~~l~~~~-~---~~-----~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+....++.+++..... . .+ .+.......-.+-|++.|+.+..+..+-++..|++.++|.++++..=-|+-
T Consensus 320 ~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg 399 (468)
T TIGR00788 320 LFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLG 399 (468)
T ss_pred HHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHH
Confidence 66555555554332211 0 00 010112233345677779999999999999999999999999999888886
Q ss_pred HHHHHHh--------hhhccccch-hHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 024717 213 ILLFLLL--------RGFYRNIEN-AAMVAFAALGLFIAAGCMHVLKRWGKQPYQNWH 261 (263)
Q Consensus 213 v~~~l~~--------g~~~~~~~~-~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 261 (263)
-.+.-.. |--.+|.++ ......|.+.-++.....+.+-+.+++..+|.+
T Consensus 400 ~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~~~~~~~~~~~ 457 (468)
T TIGR00788 400 SSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPRLEDVIDTEGK 457 (468)
T ss_pred HHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCCCccccCccch
Confidence 3333221 211122333 333444444444455556666566666666554
No 80
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.09 E-value=0.00053 Score=65.48 Aligned_cols=171 Identities=10% Similarity=-0.026 Sum_probs=99.9
Q ss_pred CCccchHHHHHHHHHHHHHHHhccc-cc-CCCCCcchhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccC
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGW-TE-NPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD 103 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w-~E-Nyg~~~~~~~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~ 103 (263)
.+|+.||.+-.++.++..++..... +| +..+++++..++..+.+.|||+.+...+.+.++-+..... ..|.|....+
T Consensus 183 ~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~-~s~l~~y~~~ 261 (410)
T TIGR00885 183 ASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQISFSASLSRLARIRHYREGVIAQFFYVGVQIMC-WTFIIQYAVR 261 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhhHHHHHhChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhh
Confidence 3689999766655555444443221 11 1111111111234567889999988777788876665443 3455555432
Q ss_pred -CCCCch---HHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH-HHHHhhccchhhHHHHHHHHHHHHHh
Q 024717 104 -GREVHL---GLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF-VFSIIAYDYQEIGILVALFCLFHACV 178 (263)
Q Consensus 104 -~~~~pl---GlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~-~l~~~~~~~~~~~~~~~~Fc~fE~~v 178 (263)
..+.+- +...+.++.+.++|-.+...+.. |+++.+.+.....+..+ ++..+..+. ...++++.+.-.+.
T Consensus 262 ~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~---r~~~~~~l~i~~~~~~~~~ll~~~~~~---~~~~~~l~~~glf~ 335 (410)
T TIGR00885 262 LIPGMTAGFAANYNIGAMVIFFISRFIGTWLIS---YLAAHKVLMAYAIIGMALCLGSIFAGG---HVGLYCLTLCSAFM 335 (410)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCHHHHHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHH
Confidence 111111 23445555666666666666654 45666666555555543 333333333 13467788888888
Q ss_pred HhHhhHHHHHHHhcCCCchhHHHHH
Q 024717 179 GLILPSLARLRTMYVPNELRGGMIS 203 (263)
Q Consensus 179 G~y~P~m~~Lr~~~Vp~e~Ratvm~ 203 (263)
+..||.+.++-.+..+++.+.....
T Consensus 336 s~~fp~i~sl~~~~~g~~~~~~s~~ 360 (410)
T TIGR00885 336 SLMFPTIYGIALKGLGQDTKYGAAG 360 (410)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHHH
Confidence 8888999999999999998754433
No 81
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.07 E-value=0.00062 Score=66.14 Aligned_cols=180 Identities=16% Similarity=0.067 Sum_probs=96.7
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCCCCC------cch----hhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHh
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENPKMA------FDD----YRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWIL 95 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~------~~~----~~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~ 95 (263)
.||+.+|....++.++..++.....++...++ +++ ...+.+..+++|++.+.+.+...+..+..+ ....
T Consensus 195 ~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 273 (476)
T PLN00028 195 TAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVEL-TMDN 273 (476)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHH-HHHh
Confidence 48999999877777666655554332222111 000 011335667889998888777655544433 3456
Q ss_pred hhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCC-CC--Cch-hHHHHHHHHHHHHHHHhhccchhhHHHH
Q 024717 96 WAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPS-SF--RTE-DCLLYAFVVLGFVFSIIAYDYQEIGILV 168 (263)
Q Consensus 96 WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~-~~--~~~-~~l~~~~~~~a~~l~~~~~~~~~~~~~~ 168 (263)
|.|.+.. +-+...-|.+.+.+-++.++|+.+.+++..+-. |. +.. ..+...+.+.++++....... +.....
T Consensus 274 ~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~-~~~~~~ 352 (476)
T PLN00028 274 IIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN-SLGAAI 352 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc-hHHHHH
Confidence 8887643 223344688888888999999988887764211 11 111 122233333333222221121 112222
Q ss_pred HHHHHH----HHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 169 ALFCLF----HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 169 ~~Fc~f----E~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
...+++ ..+.|..++.+ .+ ++++.|++++++....-|+-
T Consensus 353 ~~~~l~~~~~~~~~~~~~~~~----~~-~~~~~~g~~~g~~~~~g~lg 395 (476)
T PLN00028 353 VVMILFSIFVQAACGATFGIV----PF-VSRRSLGVISGLTGAGGNVG 395 (476)
T ss_pred HHHHHHHHHHHHhhhhhcccC----cc-cChhhchhhhhhhhccccHH
Confidence 223333 33345444433 33 34579999999987776654
No 82
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.06 E-value=0.00014 Score=68.42 Aligned_cols=145 Identities=16% Similarity=0.164 Sum_probs=90.1
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhH
Q 024717 65 FFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDC 142 (263)
Q Consensus 65 ~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~ 142 (263)
+++.+.+||+...+-+.+.+.....-++... .|.+.. +.++...|++.+.++++..+++.+.+.+.. |++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~d---r~g~~~~ 84 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVA-VPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLAD---RYDRKKL 84 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhh---hcCCceE
Confidence 4555666776666655555554444433332 355443 456677999999999999999999998875 4455454
Q ss_pred HHHHHHHHHHHHH---Hhh-ccchhhHHHHHHHHHH-HHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHH
Q 024717 143 LLYAFVVLGFVFS---IIA-YDYQEIGILVALFCLF-HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAIL 214 (263)
Q Consensus 143 l~~~~~~~a~~l~---~~~-~~~~~~~~~~~~Fc~f-E~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~ 214 (263)
+.....+.+.++. ... ....+. ..+....++ -.+.|...|+...+-.+.+|+|+|+++++++..--++-..
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 160 (417)
T PRK10489 85 ILLARGTCGLGFIGLALNAFLPEPSL-LAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV 160 (417)
T ss_pred EEehHHHHHHHHHHHHHHHHcCCCcH-HHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHH
Confidence 4443333332221 111 112221 122222222 3445788899999999999999999999999887776543
No 83
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.03 E-value=0.0003 Score=66.45 Aligned_cols=134 Identities=14% Similarity=-0.011 Sum_probs=90.0
Q ss_pred hHHHHHHHHHHHH--HHHHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH
Q 024717 74 RIWLLVLAQACLQ--FSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG 151 (263)
Q Consensus 74 ~il~lg~~qslfE--gsmy~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a 151 (263)
+...+.+.|.+-. ..++.+...|. ....+.++...|++.+.|+++..+++.+.+.+.. |++.++.+.....+.+
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laD---r~grr~vl~~~~~~~~ 79 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFAD---SFPKGRVMFIANGIKL 79 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhh---ccCCchhhHHHHHHHH
Confidence 3334444444444 34566666654 2222455667899999999999999999999875 5666666655554433
Q ss_pred H-HHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHH
Q 024717 152 F-VFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 152 ~-~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~ 216 (263)
+ ++......+ .+...++.-+..|.+.|+...+-.+++|+|+|++++++...--+.--++.
T Consensus 80 ~~~~~~~~~~~-----~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~G 140 (393)
T PRK11195 80 LGCLLMLFGIH-----PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLG 140 (393)
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 222111111 13444555666799999999999999999999999999998888753333
No 84
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.03 E-value=0.00044 Score=65.97 Aligned_cols=133 Identities=17% Similarity=0.157 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHH
Q 024717 76 WLLVLAQACLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVF 154 (263)
Q Consensus 76 l~lg~~qslfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l 154 (263)
+.+.+...+.-...+.++ .|.|.+.+ +-++.+.|++.+.+.++.++|+.+.+.+.. |++.++.+.....+.+++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~-~~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~d---r~g~~~~~~~~~~~~~~~~ 105 (438)
T TIGR00712 30 LGIFFGYAAYYLVRKNFA-LAMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSD---RSNPRVFLPAGLILSAAVM 105 (438)
T ss_pred HHHHHHHHHHHHHhccHH-hhhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhh---ccCCceehHHHHHHHHHHH
Confidence 333333333333333334 46787766 446677999999999999999999999875 5566666655554444333
Q ss_pred HHhh-ccc--hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 155 SIIA-YDY--QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 155 ~~~~-~~~--~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.... .+. ..........++.-++.|+++|.....-.++.|+++|+++++++..--|+.
T Consensus 106 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g 166 (438)
T TIGR00712 106 LLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIG 166 (438)
T ss_pred HHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhH
Confidence 3221 111 111122333445566678899988888899999999999999998877764
No 85
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.01 E-value=0.00062 Score=61.26 Aligned_cols=109 Identities=16% Similarity=0.071 Sum_probs=78.0
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH-HHHHhhcc---chhhHHHHHHHHHHHHHh
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF-VFSIIAYD---YQEIGILVALFCLFHACV 178 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~-~l~~~~~~---~~~~~~~~~~Fc~fE~~v 178 (263)
+.++...|++.+.+.+..++++.+.+.+.. |.+.++.+.....+.+. ++..+..+ ..+....+....+.-.+.
T Consensus 30 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~d---r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 106 (365)
T TIGR00900 30 TGSASVLSLAALAGMLPYVVLSPIAGALAD---RYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQ 106 (365)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhhhHHHH---hhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 456678899999999999999999998875 45666666554444332 22222211 112223345555566677
Q ss_pred HhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHH
Q 024717 179 GLILPSLARLRTMYVPNELRGGMISLSLAPANAAIL 214 (263)
Q Consensus 179 G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~ 214 (263)
|.+.|+...+-.++.|+|+|+.++++++.=.++-.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 142 (365)
T TIGR00900 107 AFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYI 142 (365)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999999999999999999988777543
No 86
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.97 E-value=0.00066 Score=64.22 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=96.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHH
Q 024717 73 KRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL 150 (263)
Q Consensus 73 ~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~ 150 (263)
+|.++ -..+.+.-...+...-...+.+++ +-+....|++.+.+++...+.+.+.+.+.. |.+.++.+....+..
T Consensus 11 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~d---r~g~k~~l~~~~~~~ 86 (400)
T PRK11646 11 GKYFL-LIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIAD---RFGAKPMIVTGMLMR 86 (400)
T ss_pred cHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHH---HhCchHHHHHHHHHH
Confidence 44333 366777777777776666666644 456788999999999999999888888875 456666676666666
Q ss_pred HHHHHHhhccchhhHHHHHHHHHHH-HHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHH
Q 024717 151 GFVFSIIAYDYQEIGILVALFCLFH-ACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 151 a~~l~~~~~~~~~~~~~~~~Fc~fE-~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~ 216 (263)
+.++......+ +. ..+....+++ +..|.+.|....+-.+.+|+|+|++++++++.=.|+-..+.
T Consensus 87 ~~~~~~~~~~~-~~-~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig 151 (400)
T PRK11646 87 AAGFATMAIAH-EP-WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIG 151 (400)
T ss_pred HHHHHHHHHhc-cH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 54444332222 21 2233333333 34478899999999999999999999999999888865444
No 87
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.97 E-value=0.00074 Score=63.58 Aligned_cols=135 Identities=7% Similarity=-0.036 Sum_probs=86.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHH
Q 024717 73 KRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL 150 (263)
Q Consensus 73 ~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~ 150 (263)
+++....+.+.+++...+ +.+.|.|.+.+ +-++...|++.+.+.++..+++.+.+++.. |.+.++.+....++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d---r~g~k~~l~~~~~~~ 88 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDG-LEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAE---IIGPLKTMMIGLLLW 88 (402)
T ss_pred chhhHHHHHHHHHHHhhh-hHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHH---HcCcHHHHHHHHHHH
Confidence 445555555556665555 34445555544 446778999999999999999999999986 567777776666655
Q ss_pred HHHHHHh---hccchhhHHHHHHHHHHH-HHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 151 GFVFSII---AYDYQEIGILVALFCLFH-ACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 151 a~~l~~~---~~~~~~~~~~~~~Fc~fE-~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+++.... .....+. ..+.....++ .+.|...|.....-.+.+|+|+|++++++++.=-|+-
T Consensus 89 ~~~~~~~~~~~~~~~~~-~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 153 (402)
T TIGR00897 89 CVGHAAFIVFGLGHANY-PLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIG 153 (402)
T ss_pred HHHHHHHHHHhccCccH-HHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 5433211 1111121 1122222222 2335566666666678899999999999999877764
No 88
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.96 E-value=0.0023 Score=60.93 Aligned_cols=119 Identities=12% Similarity=0.081 Sum_probs=68.2
Q ss_pred HHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhh---ccchhhHH
Q 024717 92 FWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA---YDYQEIGI 166 (263)
Q Consensus 92 FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~---~~~~~~~~ 166 (263)
.+..|.|.+.. +.++..-++......+...+|+.+.+++.. |++.++.+...+++.+++..... ..+.....
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d---r~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~ 365 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVD---KFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIV 365 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHH---HhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHH
Confidence 44557777654 222233345555566777788888877764 45555556555555554433221 11111011
Q ss_pred HHHHHHHHHHHhHh-HhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 167 LVALFCLFHACVGL-ILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 167 ~~~~Fc~fE~~vG~-y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
.....+.+=+..+. +-|....+-.+..|+++|++++++...=-|+..
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~ 413 (479)
T PRK10077 366 ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIAN 413 (479)
T ss_pred HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHH
Confidence 12223333333333 348888899999999999999999877666553
No 89
>PRK10504 putative transporter; Provisional
Probab=97.96 E-value=0.00055 Score=65.44 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH
Q 024717 74 RIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG 151 (263)
Q Consensus 74 ~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a 151 (263)
+++.+.+...+ +..-+..+..|.|.+.+ +.+....|++.+.++++.++++.+.+++.. +++.++.+....++.+
T Consensus 11 ~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---~~g~r~~~~~~~~~~~ 86 (471)
T PRK10504 11 QLWIVAFGFFM-QSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLAD---RVGVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHH-HHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhchHHHHHHHHHHHH
Confidence 44555554443 33333344557888876 345566899999999999999999998875 4566565555444444
Q ss_pred HHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 152 FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 152 ~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
.+.......+ +....+..-++.=++.|.++|....+-.++.|+|+|++++++++.--|+--
T Consensus 87 ~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 147 (471)
T PRK10504 87 LGSLFCALSG-TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGP 147 (471)
T ss_pred HHHHHHHHhC-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 3332222221 111222333344444588999999999999999999999999998888753
No 90
>TIGR00895 2A0115 benzoate transport.
Probab=97.93 E-value=0.0003 Score=64.11 Aligned_cols=136 Identities=21% Similarity=0.259 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH
Q 024717 74 RIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG 151 (263)
Q Consensus 74 ~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a 151 (263)
+++.+..+..+.++.-+...-...|.+.+ +-++...|++++.+.+..++++.+.+.+.. |.+.++.+....++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d---~~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 17 RAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLAD---RIGRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHH---HhhhHHHHHHHHHHHH
Confidence 34444554445555444444556777765 335567899999999999999999998875 5666666666555554
Q ss_pred HHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 152 FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 152 ~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
++........ +....+....+.-++.|..+|....+-.++.|+|.|+++++++..--++-.
T Consensus 94 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 154 (398)
T TIGR00895 94 VFTLLCALAT-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGA 154 (398)
T ss_pred HHHHHHHHcc-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHH
Confidence 4333322222 212223333444444588899999999999999999999999998877753
No 91
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.93 E-value=0.0012 Score=63.06 Aligned_cols=115 Identities=15% Similarity=0.140 Sum_probs=81.6
Q ss_pred hhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHH
Q 024717 95 LWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFC 172 (263)
Q Consensus 95 ~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc 172 (263)
.+.|.+.+ +-+....|++.+.+++..++++.+.+.+.. |.+.++.+....++.+++.......+ +....+....
T Consensus 44 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~d---r~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ 119 (434)
T PRK11663 44 AAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSD---RSNARYFMGIGLIATGIINILFGFSS-SLWAFALLWV 119 (434)
T ss_pred HhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHh---hcCCchhHHHHHHHHHHHHHHHHHHh-HHHHHHHHHH
Confidence 45666655 345567899999999999999999999885 56666777666666554443322221 1112223333
Q ss_pred HHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 173 LFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 173 ~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
+.-+..|..+|....+-.+..|+|+|+++++++..=-|+-.
T Consensus 120 l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~ 160 (434)
T PRK11663 120 LNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGG 160 (434)
T ss_pred HHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 44566788999999999999999999999999988777653
No 92
>PRK09848 glucuronide transporter; Provisional
Probab=97.93 E-value=0.0072 Score=57.72 Aligned_cols=145 Identities=9% Similarity=0.111 Sum_probs=91.4
Q ss_pred HHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccC--CCCCchHHH-HHHHHHHHHHhHhhhhhhhcCCCCCCc
Q 024717 63 TSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--GREVHLGLI-FPSLLGARMLGSTVFPWLISGPSSFRT 139 (263)
Q Consensus 63 ~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~--~~~~plGlI-Fs~FM~~~mlGS~~f~~l~~~~~~~~~ 139 (263)
++.++.+++||+.+.+.+...+.....+.+.. +.|.+.++ +.+...+.+ +....+..++++.+.+++.. |++.
T Consensus 218 ~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---r~g~ 293 (448)
T PRK09848 218 KISLQTLKRNRPLFMLCIGALCVLISTFAVSA-SSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVA---RIGK 293 (448)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh-hheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCc
Confidence 34577899999999998888888777776653 56655442 122223433 34445667778888887764 5666
Q ss_pred hhHHHHHHHHHHHHHHHhhc-cchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCc-------hhHHHHHHhHHHHHH
Q 024717 140 EDCLLYAFVVLGFVFSIIAY-DYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNE-------LRGGMISLSLAPANA 211 (263)
Q Consensus 140 ~~~l~~~~~~~a~~l~~~~~-~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e-------~Ratvm~~fr~PlN~ 211 (263)
++.+..+..+.+++...... +..+....+....++-...|+.+|....+-.+.+|++ .++..++++..--++
T Consensus 294 ~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl 373 (448)
T PRK09848 294 KNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC 373 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH
Confidence 66666655544433322222 2222222334455666777999999999999999865 347777776665444
No 93
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.92 E-value=0.0011 Score=63.10 Aligned_cols=181 Identities=13% Similarity=0.093 Sum_probs=110.9
Q ss_pred CccchHHHHHHHHHHHHHHHhccccc--CCCC-Ccc-hhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Q 024717 27 GVVPSSTASVFLSILGIICVSRGWTE--NPKM-AFD-DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA 102 (263)
Q Consensus 27 g~~aPF~~a~~~l~i~~ili~~~w~E--Nyg~-~~~-~~~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~ 102 (263)
|+..-..+.+++.+++.++....-+| +..+ +++ ...++.++.+++||....+-....+....+.+.--. .+-+.+
T Consensus 175 ~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~-~~y~~~ 253 (428)
T PF13347_consen 175 GYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTF-LPYYFT 253 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhH-HHHHHH
Confidence 44444444444444444444444444 2222 111 122356889999999988888777765554432221 222222
Q ss_pred --CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccc-hhhHHHHHHHHHHHHHhH
Q 024717 103 --DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY-QEIGILVALFCLFHACVG 179 (263)
Q Consensus 103 --~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~-~~~~~~~~~Fc~fE~~vG 179 (263)
-+++-..+.+...+.++..+++.+.+++.. |++.++.+..+.++.+.+........ .+....+...++...+.|
T Consensus 254 ~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~---r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~ 330 (428)
T PF13347_consen 254 YVLGNEGLISIFMLIFFVASIVGSPLWGRLSK---RFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYG 330 (428)
T ss_pred HHhcCchhhHHHHHHHHHHHHHHHHHHHHHHH---HccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhc
Confidence 133345788888899999999999988875 56777777776666665444432222 232344566667777779
Q ss_pred hHhhHHHHHHHhcCCCch-------hHHHHHHhHHHHHH
Q 024717 180 LILPSLARLRTMYVPNEL-------RGGMISLSLAPANA 211 (263)
Q Consensus 180 ~y~P~m~~Lr~~~Vp~e~-------Ratvm~~fr~PlN~ 211 (263)
.+++.+..+..+.+|+++ .+.+++.+-..-++
T Consensus 331 ~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~ 369 (428)
T PF13347_consen 331 AFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI 369 (428)
T ss_pred ccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH
Confidence 999999999999999642 36666665554444
No 94
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.90 E-value=0.00095 Score=62.22 Aligned_cols=134 Identities=19% Similarity=0.128 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH
Q 024717 75 IWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF 152 (263)
Q Consensus 75 il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~ 152 (263)
+..+.....+.|+.-..-.-.-.|.+.+ +-++...|++++.+.+..++|+.+.+.+.. |++.++.+....++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~~ 92 (406)
T PRK11551 16 TIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLAD---RIGRKRILIVSVALFGL 92 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCchhHHHHHHHHHH
Confidence 5555555555555433333333466655 446677899999999999999999998875 56666666665555443
Q ss_pred HHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 153 VFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 153 ~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+........ +....+...++.-.+.|..+|....+-.+..|+|+|+++++++..=.++-
T Consensus 93 ~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 151 (406)
T PRK11551 93 FSLATAQAW-DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFG 151 (406)
T ss_pred HHHHHHHhc-cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 332222121 22233444455555568889999999999999999999999988755554
No 95
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.90 E-value=0.00045 Score=67.39 Aligned_cols=146 Identities=12% Similarity=0.049 Sum_probs=99.6
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc-C----CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHH
Q 024717 70 FGDKRIWLLVLAQACLQFSIALFWILWAPTLVA-D----GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLL 144 (263)
Q Consensus 70 ~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~-~----~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~ 144 (263)
++.||.+..-+...+.|..-|--+.-+.|.+.. . -++..-|++++.|.+...+++.+.+++..+ .++.++.+.
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr--~~G~~~~l~ 83 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDR--VWGTKKTMV 83 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHh--hcchHHHHH
Confidence 346666655555666676665555566665543 2 245678999999999999999999988751 267777777
Q ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCc---hhHHHHHHhHHHHHHHHHHHHH
Q 024717 145 YAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNE---LRGGMISLSLAPANAAILLFLL 218 (263)
Q Consensus 145 ~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e---~Ratvm~~fr~PlN~~v~~~l~ 218 (263)
...++.++........+. ....+.+..+.-++.|.+.|+...+-++..|++ +|+++++++..-.|+-..+.-.
T Consensus 84 ~~~~~~~~g~~~~~~~~~-~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIY-PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred HHHHHHHHHHHHHHhccc-HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 766666544443332221 122334455555666899999999999999876 4999999999999996544433
No 96
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.88 E-value=0.0023 Score=61.39 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=80.9
Q ss_pred hhhhhhccC-CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhh-cc--chhhHHHHHH
Q 024717 95 LWAPTLVAD-GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA-YD--YQEIGILVAL 170 (263)
Q Consensus 95 ~WTP~L~~~-~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~-~~--~~~~~~~~~~ 170 (263)
.+.|.+.++ -+....|++.+++++..++++.+.+.+.. |++.++.+....++.+++..... .+ ..+....+..
T Consensus 50 ~~~p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~D---r~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 50 LAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSD---RSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred HhhHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhh---ccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 466777653 34567999999999999999999999885 57777777666555543332221 11 1121222333
Q ss_pred HHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 171 FCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 171 Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
..+.=++.|.++|.....-.++.|+|+|+++++++..-.|+.
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 168 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG 168 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Confidence 444456678899988888889999999999999998888764
No 97
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.85 E-value=0.0017 Score=59.52 Aligned_cols=111 Identities=12% Similarity=0.047 Sum_probs=77.0
Q ss_pred hhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHH
Q 024717 98 PTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFH 175 (263)
Q Consensus 98 P~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE 175 (263)
|.+++ +-++.+.|++++.+++..++++.+.+.+.. |.+.++.+.....+.+++........ +....+....+.=
T Consensus 36 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~D---r~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G 111 (405)
T TIGR00891 36 AEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGD---RYGRRLPMVTSIVLFSAGTLACGFAP-GYITMFIARLVIG 111 (405)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHH
Confidence 44444 456788999999999999999999999885 56666666655554443332222111 2122233334444
Q ss_pred HHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 176 ACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 176 ~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+.|.++|....+-.+..|+|+|+.++++++.=-++-
T Consensus 112 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g 148 (405)
T TIGR00891 112 IGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVG 148 (405)
T ss_pred hhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHH
Confidence 4558899999999999999999999999988765553
No 98
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.85 E-value=0.0032 Score=59.48 Aligned_cols=104 Identities=14% Similarity=0.118 Sum_probs=75.1
Q ss_pred CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHH----HHHhH
Q 024717 104 GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF----HACVG 179 (263)
Q Consensus 104 ~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~f----E~~vG 179 (263)
-++.+.|++.+.++...++++.+.+.+.. |++.++.+....++.+++........ + ++.+++. -.+.|
T Consensus 52 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~D---r~grr~~~~~~~~~~~~~~~~~~~~~-~----~~~l~~~r~l~G~~~g 123 (394)
T PRK10213 52 ISEGVAGQSVTVTAFVAMFASLFITQTIQ---ATDRRYVVILFAVLLTLSCLLVSFAN-S----FSLLLIGRACLGLALG 123 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcHHHHHHHHHHHHHHHHHHHHHC-h----HHHHHHHHHHHHHhhH
Confidence 35667899999999999999999998875 56777777666666554433332221 1 3333333 33447
Q ss_pred hHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHH
Q 024717 180 LILPSLARLRTMYVPNELRGGMISLSLAPANAAILL 215 (263)
Q Consensus 180 ~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~ 215 (263)
.++|....+-.+++|+|+|+.+++.+..--|+-.++
T Consensus 124 ~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~i 159 (394)
T PRK10213 124 GFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVI 159 (394)
T ss_pred HHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999877775433
No 99
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.85 E-value=0.00047 Score=62.09 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=76.2
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHh
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLIL 182 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~ 182 (263)
+.++...|++++.+.+..++++.+.+.+.. |.+.++.+....++.+++........ +....+...++.-++.|.++
T Consensus 25 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---~~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~ 100 (399)
T TIGR00893 25 GLSAAQYGYVFSAFSWGYVVGQFPGGWLLD---RFGARKTLAVFIVIWGVFTGLQAFAG-AYVSLYILRVLLGAAEAPFF 100 (399)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHhHHHHHH---hcCcceeeHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHhhh
Confidence 446677899999999999999999999875 45555555544444332222221111 21223444455555668899
Q ss_pred hHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHH
Q 024717 183 PSLARLRTMYVPNELRGGMISLSLAPANAAILL 215 (263)
Q Consensus 183 P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~ 215 (263)
|....+-.++.|+|+|++++++++.--|+-.++
T Consensus 101 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 133 (399)
T TIGR00893 101 PGIILIVASWFPASERATAVSIFNSAQGLGGII 133 (399)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHH
Confidence 999999999999999999999999887775433
No 100
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.81 E-value=0.0021 Score=59.80 Aligned_cols=112 Identities=11% Similarity=0.026 Sum_probs=75.9
Q ss_pred hhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHH
Q 024717 97 APTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF 174 (263)
Q Consensus 97 TP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~f 174 (263)
.|.+.+ +.++...|++++.+++...+++.+.+++.. |++.++.+.......+++.......+ +....+....+.
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~D---r~g~r~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~~~l~ 101 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIAD---RSGRKPVAIPGAALFIIASLLCSLAE-TSSLFLAGRFLQ 101 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHH---HhCChHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHH
Confidence 555544 456677899999999999999999998885 45555666555544443333222221 111223333333
Q ss_pred HHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 175 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 175 E~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
-.+.|..+|....+-.+..|+|+|+++++++..-.|+.
T Consensus 102 g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~ 139 (392)
T PRK10473 102 GIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCII 139 (392)
T ss_pred HhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 44457888988889999999999999999998776664
No 101
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.81 E-value=0.018 Score=55.39 Aligned_cols=156 Identities=18% Similarity=0.191 Sum_probs=83.5
Q ss_pred HHHHHhcChhHHHHHHHHHHHH---HHHHHHHHhhhhhhcc-CC-CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCc
Q 024717 65 FFTYIFGDKRIWLLVLAQACLQ---FSIALFWILWAPTLVA-DG-REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRT 139 (263)
Q Consensus 65 ~~~~i~~d~~il~lg~~qslfE---gsmy~FVf~WTP~L~~-~~-~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~ 139 (263)
+...++|||+++..-+...+.+ +..|.|...+ +++ ++ ++...|.+.+-=-++=..-=...+++.+ |++.
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~y---l~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~---r~g~ 272 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIY---LQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLK---RFGI 272 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHH---HHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHH---hcCH
Confidence 3357899999987666655554 4455555433 333 32 2222343322111111111112334443 6677
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHH----HHH-HhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH--
Q 024717 140 EDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCL----FHA-CVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA-- 212 (263)
Q Consensus 140 ~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~----fE~-~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~-- 212 (263)
++.+.++.+..++=...-....++.+ ..+...+ .|. +-|.++++....-.+.+|+|.|+|..++|-.=-|=+
T Consensus 273 ~~ll~~a~~~~~vR~~l~a~~~~~~~-~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~ 351 (400)
T PF03825_consen 273 KWLLLLALVAYAVRWLLYAYFSDPWP-FIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGG 351 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcH-HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHH
Confidence 77777766665533222222211111 1222222 243 348999999999999999999999999998866643
Q ss_pred HHHHHHhhhhccccc
Q 024717 213 ILLFLLLRGFYRNIE 227 (263)
Q Consensus 213 v~~~l~~g~~~~~~~ 227 (263)
++..+..|-.+++.+
T Consensus 352 ~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 352 AIGSLIGGWLYDAFG 366 (400)
T ss_pred HHHHHHHHHHHHHhc
Confidence 233344454344443
No 102
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.80 E-value=0.001 Score=61.18 Aligned_cols=106 Identities=14% Similarity=0.098 Sum_probs=74.9
Q ss_pred CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhh
Q 024717 104 GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILP 183 (263)
Q Consensus 104 ~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P 183 (263)
-++...|++.+.+.++.++|+.+.+.+.. |.+.++.+.....+.+++........ +....+....+.-.+.|...|
T Consensus 23 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---~~g~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~ 98 (377)
T PRK11102 23 VSAGSVQMTLSAYILGFAIGQLFYGPMAD---SFGRKPVILGGTLVFALAAVACALAQ-TIDQLIYMRFLHGLAAAAASV 98 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhchHHh---hcCChHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHH
Confidence 35667899999999999999999998875 45666666666655553333222111 112223333444455688899
Q ss_pred HHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 184 SLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 184 ~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
....+-.+..|+|+|+++++++..-.++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 128 (377)
T PRK11102 99 VINALMRDMFPKEEFSRMMSFVTLVMTIAP 128 (377)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988766643
No 103
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.0019 Score=62.46 Aligned_cols=189 Identities=13% Similarity=0.068 Sum_probs=130.2
Q ss_pred hhhHHHHHHHHHHHHHHhhh---------------ccc-CCccchHHHHHHHHHHHHHHHhcccccCCCC-CcchhhH--
Q 024717 3 FFESAALIGGQVLANWLVGI---------------DVK-KGVVPSSTASVFLSILGIICVSRGWTENPKM-AFDDYRT-- 63 (263)
Q Consensus 3 ~~ns~~AI~aG~~a~~lv~~---------------~~~-~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~~~~~~-- 63 (263)
.+|+.=|+++-+++++++.+ ... ..+..||...+..+++-.+.+.....++-.. +.++.++
T Consensus 147 ~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~ 226 (422)
T COG0738 147 AFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGS 226 (422)
T ss_pred HhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccccc
Confidence 57999999999999998873 000 2377899999988888888777655333321 1111121
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCch
Q 024717 64 SFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE 140 (263)
Q Consensus 64 ~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~ 140 (263)
.......++|+...-.+.|.|+=|+-=.. -.|.|.+.. |.++.+=....+.||++.|+|=.+-..+++ ++++|
T Consensus 227 ~~~~~l~~~~~~~~gvl~~FlYVG~Eva~-gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~---~~~~~ 302 (422)
T COG0738 227 AGLSSLFQNKHLRLGVLAIFLYVGAEVAI-GSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMS---RIKPE 302 (422)
T ss_pred chHHHHHhChHHHHHHHHHHHHHhHHHHH-HHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCHH
Confidence 25678899999999888888887764333 356666654 346667778888888888888877777775 68888
Q ss_pred hHHHHHHHHHH-HHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchh
Q 024717 141 DCLLYAFVVLG-FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELR 198 (263)
Q Consensus 141 ~~l~~~~~~~a-~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~R 198 (263)
+.+.+--.++. .|+.+...+. .+.+++..+.-...++-||...++..+.+|++..
T Consensus 303 k~Laf~a~~~ill~~~~~l~~g---~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts 358 (422)
T COG0738 303 KYLAFYALIAILLLLAVALIGG---VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS 358 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc
Confidence 88765444444 4444333333 2345555556666799999999999999995443
No 104
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.72 E-value=0.0044 Score=57.66 Aligned_cols=137 Identities=9% Similarity=0.017 Sum_probs=82.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHH
Q 024717 72 DKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVV 149 (263)
Q Consensus 72 d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~ 149 (263)
|.|.+.+...-.......+.+..-+.|.+.+ +-++...|++.+.++++.++++.+++.+.. |++.++.+......
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~D---r~grr~~~~~~~~~ 82 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSD---RVGRRPVILVGMSI 82 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHH---hcCChHHHHHHHHH
Confidence 4555554444444433333333334455544 445677899999999999999999999885 56666666665555
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 150 LGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 150 ~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+++.......+ +....+....+.=.+.|...|....+..+..|+|+|+.+++++..=.++.
T Consensus 83 ~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (394)
T PRK11652 83 FILGTLVALFAH-SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVS 144 (394)
T ss_pred HHHHHHHHHHHc-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 544333322221 11111222222222335667777778888899999999999887655543
No 105
>PRK03699 putative transporter; Provisional
Probab=97.71 E-value=0.0038 Score=58.54 Aligned_cols=129 Identities=9% Similarity=0.171 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHH
Q 024717 74 RIWLLVLAQACLQFSI-ALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL 150 (263)
Q Consensus 74 ~il~lg~~qslfEgsm-y~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~ 150 (263)
|+...+...-.+++.. +.+=..+ |.+.+ +-++...|++++.+++..++|+.+.+++.. |++.++.+....++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~-~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d---r~g~r~~~~~~~~~~ 82 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVM-GPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLME---IIPLKRQLIFGFALM 82 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHH
Confidence 3444444444444443 3333333 44444 446678999999999999999999999875 567777776666555
Q ss_pred HHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHH
Q 024717 151 GFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 151 a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
+++.......+ +....+.+..+.=.+.|..+|....+-.++.|+++|+..+++...
T Consensus 83 ~i~~~l~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 138 (394)
T PRK03699 83 ILAVAGLMFSH-SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDS 138 (394)
T ss_pred HHHHHHHHHcc-hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHH
Confidence 54333332222 212223344455556688888888888899999999999887654
No 106
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.69 E-value=0.0035 Score=58.35 Aligned_cols=140 Identities=12% Similarity=0.100 Sum_probs=89.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHH
Q 024717 72 DKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVV 149 (263)
Q Consensus 72 d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~ 149 (263)
+|.++++-+.+.+.-.++. .+.-..|.+.+ +.++...|++.+.+.+...+++.+.+.+.. |++.++.+.....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~d---r~g~k~~~~~~~~~ 80 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIA-VLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIK---RIGFNRSYYLASLI 80 (381)
T ss_pred HHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHH
Confidence 4456666655555444333 33344555544 446678999999999999999999999875 56666666665555
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHH
Q 024717 150 LGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 150 ~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~ 216 (263)
.+.........+ +....+.+..+.=...|..+|.+...-.+..|+|+|+.+++.++.=.|+-..+.
T Consensus 81 ~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 146 (381)
T PRK03633 81 FAAGCAGLGLMV-GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLG 146 (381)
T ss_pred HHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 553333222221 111112222222233477888887777888999999999999998888754333
No 107
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.68 E-value=0.0023 Score=59.62 Aligned_cols=138 Identities=12% Similarity=0.029 Sum_probs=87.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHH
Q 024717 72 DKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVV 149 (263)
Q Consensus 72 d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~ 149 (263)
++++..+.+...+.-...........+.+.+ +.++...|++.+++++..++++.+.+.+.. |++.++.+....++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~D---r~g~r~~l~~~~~~ 90 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYAD---TLGPKKAVVFGLCG 90 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHh---ccCCcchHHHHHHH
Confidence 4555555555555555544444444444433 446778999999999999999999999885 56666766665544
Q ss_pred HHHH---HHHhh-ccc---hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 150 LGFV---FSIIA-YDY---QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 150 ~a~~---l~~~~-~~~---~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+++ +.... ..+ .+....+..-.+.=.+.|.+.|....+-.+.+|+|+|+++++++..=.+.-
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 160 (399)
T PRK05122 91 CALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGA 160 (399)
T ss_pred HHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHH
Confidence 3322 11111 111 011111222233444557888988888889999999999999988766654
No 108
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.68 E-value=0.0041 Score=58.04 Aligned_cols=135 Identities=10% Similarity=-0.002 Sum_probs=85.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHH
Q 024717 72 DKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVV 149 (263)
Q Consensus 72 d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~ 149 (263)
|+.++.+.+.+.+.-..-+...-.- |.+.+ +-++...|++.+.+++..++|+.+.+.+.. |.+.++.+.....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~ 77 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVL-TELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSS---RYSLKHILLFLVAL 77 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhCh-HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHc---cCccHHHHHHHHHH
Confidence 4556666666555555544444433 44444 335567899999999999999999999875 56666666665555
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 150 LGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 150 ~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
.+++.......+ +....+..-.+.=.+.|.+.|....+-.++.|+++|+.+++.+..=.++
T Consensus 78 ~~~~~~l~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (382)
T PRK10091 78 CVIGNAMFTLSS-SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTV 138 (382)
T ss_pred HHHHHHHHHHhC-cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHH
Confidence 554333332222 1111222222223334778888888889999999999999987754444
No 109
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.68 E-value=0.029 Score=54.80 Aligned_cols=105 Identities=17% Similarity=0.087 Sum_probs=64.6
Q ss_pred CCCchHHHHHHHHHHHHHhHhhhh----hhhcCCCCCCchhHH--HHHHHHHHHHHHHhhc-----c---chhhHHHHHH
Q 024717 105 REVHLGLIFPSLLGARMLGSTVFP----WLISGPSSFRTEDCL--LYAFVVLGFVFSIIAY-----D---YQEIGILVAL 170 (263)
Q Consensus 105 ~~~plGlIFs~FM~~~mlGS~~f~----~l~~~~~~~~~~~~l--~~~~~~~a~~l~~~~~-----~---~~~~~~~~~~ 170 (263)
.+.|-+++.+-=-+..++..-+.. ++..+ ..++.... .++++..+.++..... . ..+.......
T Consensus 310 ~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~--~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~ 387 (475)
T TIGR00924 310 MSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRK--GKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLI 387 (475)
T ss_pred eEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHH
Confidence 456778887766666666655533 33321 12222223 4455555555444321 0 1122334555
Q ss_pred HHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 171 FCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 171 Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
+.++=+.-++..|....+-+++.|++.|+++++++..-.-+
T Consensus 388 ~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~ 428 (475)
T TIGR00924 388 YLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM 428 (475)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 55555556999999999999999999999999999865444
No 110
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.68 E-value=0.0014 Score=58.99 Aligned_cols=131 Identities=16% Similarity=0.140 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH
Q 024717 76 WLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV 153 (263)
Q Consensus 76 l~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~ 153 (263)
+....+..+..+.-|.+- .+.|.+.+ +-++...|++++.+++..++++...+.+.. |++.++.+....++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d---~~G~r~~~~~~~~~~~~~ 81 (377)
T TIGR00890 6 LVGTVIMCFTSGYVYTWT-LLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLAD---KFGPRAVAMLGGILYGLG 81 (377)
T ss_pred eHHHHHHHHHhhHHhhhh-hHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHH---HcCccchhHHhHHHHHHH
Confidence 333444444444444332 23555554 456778999999999999999999999875 455555555544444433
Q ss_pred HHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 154 FSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 154 l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.......+ +....+.+..+.=++.|..+|+....-.++.|| +|+++++++..-.++-
T Consensus 82 ~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 138 (377)
T TIGR00890 82 FTFYAIAD-SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-KRGLASGIIIGGYGLG 138 (377)
T ss_pred HHHHHHHH-HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-ccHHHHHHHHHhcchh
Confidence 22221111 111222233333344577888888887888874 6999999988766553
No 111
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.67 E-value=0.0028 Score=60.29 Aligned_cols=114 Identities=16% Similarity=0.178 Sum_probs=79.8
Q ss_pred hhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHH
Q 024717 95 LWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFC 172 (263)
Q Consensus 95 ~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc 172 (263)
.-.|.+.+ +.+....|++.+.++++.++++.+.+++.. |++.++.+.....+.+++.......+ +. ..+....
T Consensus 23 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~~~~~~~~~~~-~~-~~l~~~~ 97 (485)
T TIGR00711 23 VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAK---RFGTRRLFLISTFAFTLGSLLCGVAP-NL-ELMIIFR 97 (485)
T ss_pred HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHH---HhCcHHHHHHHHHHHHHHHHHHhCcC-CH-HHHHHHH
Confidence 34666655 345567899999999999999999999875 56666666555554443333322221 21 2233444
Q ss_pred HHH-HHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 173 LFH-ACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 173 ~fE-~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
.++ .+.|...|....+-.+..|+|+|+++++++..-.++-.
T Consensus 98 ~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 139 (485)
T TIGR00711 98 VIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAP 139 (485)
T ss_pred HHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHh
Confidence 444 34488899999999999999999999999988877754
No 112
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.66 E-value=0.0059 Score=56.57 Aligned_cols=126 Identities=15% Similarity=0.143 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHhhhhhhccC--CCCCc-----hHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHH
Q 024717 83 ACLQFSIALFWILWAPTLVAD--GREVH-----LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS 155 (263)
Q Consensus 83 slfEgsmy~FVf~WTP~L~~~--~~~~p-----lGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~ 155 (263)
.+..+.-+.++.-..|.+.++ -++.+ .|++++.+++..++++.+.+.+.. |.+.++.+....+..+.+..
T Consensus 23 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~~~~~ 99 (408)
T PRK09874 23 CFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLAD---RKGRKIMLLRSALGMGIVMV 99 (408)
T ss_pred HHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhCcHHHHHHHHHHHHHHHH
Confidence 344444444444455665442 12222 499999999999999999998875 45555666555544443333
Q ss_pred HhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 156 IIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 156 ~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
.....+ +. ..+...-++....+.++|....+-.+..|+|+|++++++++.-.++-.
T Consensus 100 ~~~~~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 155 (408)
T PRK09874 100 LMGLAQ-NI-WQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGA 155 (408)
T ss_pred HHHHHh-hH-HHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHH
Confidence 222111 11 122222233333344678888888889999999999999988877753
No 113
>PRK12382 putative transporter; Provisional
Probab=97.64 E-value=0.0058 Score=56.83 Aligned_cols=107 Identities=12% Similarity=0.050 Sum_probs=71.4
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHH---Hh-hccchhhHHHHHHHHHHHH--
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS---II-AYDYQEIGILVALFCLFHA-- 176 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~---~~-~~~~~~~~~~~~~Fc~fE~-- 176 (263)
+-++...|++.+.+++...+++.+.+.+.. |++.++.+....+..+.+.. .. ..+... ...++.+.+..+
T Consensus 47 g~s~~~~g~~~s~~~~~~~i~~~~~G~l~D---r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~ 122 (392)
T PRK12382 47 GFGNTMVGIAVGIQFLATVLTRGYAGRLAD---QYGAKRSALQGMLACGLAGLAYLLAAILPVSA-PFKFALLVVGRLIL 122 (392)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhhhhHHHH---hhcchHHHHHHHHHHHHHHHHHHhhhccccch-hHHHHHHHHHHHHH
Confidence 446788999999999999999999999885 56666666655444332211 11 111100 011223333322
Q ss_pred --HhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 177 --CVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 177 --~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
+.|.+.|+...+-.+.+|+|+|++++++++.=.|.-.
T Consensus 123 G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~ 161 (392)
T PRK12382 123 GFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGAL 161 (392)
T ss_pred HHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHH
Confidence 3467788888888899999999999999988777643
No 114
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.64 E-value=0.0023 Score=60.05 Aligned_cols=130 Identities=8% Similarity=0.052 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH
Q 024717 76 WLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV 153 (263)
Q Consensus 76 l~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~ 153 (263)
+.+....-+.++.-+.......|.+.+ +-++...|++.+.+.+...+|+.+.+.+.. |.+.++.+....+..+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~d---r~g~r~~l~~~~~~~~~~ 96 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLAD---KFGRKPLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 344444445566555556667787765 446778899999999999999999999885 566666666666555544
Q ss_pred HHHhhccchhhHHHHHHHHHHHHH----hHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 154 FSIIAYDYQEIGILVALFCLFHAC----VGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 154 l~~~~~~~~~~~~~~~~Fc~fE~~----vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
.......+ + ++.+.+.-+. .|..+|....+-.+..|+|+|+++++++..=.++-.
T Consensus 97 ~~~~~~~~-~----~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 155 (426)
T PRK12307 97 TGLSGLAS-G----VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGN 155 (426)
T ss_pred HHHHHHHh-H----HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHH
Confidence 33322221 1 2233333333 367889999999999999999999999887666643
No 115
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.60 E-value=0.0053 Score=58.28 Aligned_cols=134 Identities=11% Similarity=0.081 Sum_probs=88.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHH
Q 024717 72 DKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVV 149 (263)
Q Consensus 72 d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~ 149 (263)
|+++..+..+--.++..-..-+-.=.|.+.+ +-++...|++.+.|.+...+++...+.+.. |++.++.+....++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d---r~G~r~~~~~~~~~ 82 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLA---IIGARRWIAGIMVL 82 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH---HhChHHHHHHHHHH
Confidence 6667666666655555533333333466655 346778999999999999999999998875 56777766655544
Q ss_pred HHH-HHHHhhccchhhHHHHHHHHHH-HHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 150 LGF-VFSIIAYDYQEIGILVALFCLF-HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 150 ~a~-~l~~~~~~~~~~~~~~~~Fc~f-E~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
.++ ++.....++. ..+...-.+ =+..|.++|+....-.++.|+++|+++++++..=.++
T Consensus 83 ~~~~~~~~~~~~~~---~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~ 143 (412)
T TIGR02332 83 WGIASTATMFATGP---ESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPV 143 (412)
T ss_pred HHHHHHHHHHhcCH---HHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 443 2322222221 112222222 2344778999999999999999999999999875554
No 116
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.59 E-value=0.0038 Score=55.46 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=77.4
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHh
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLIL 182 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~ 182 (263)
+.++...|++.+...+...+++.+.+.+.. |.+.++.+.....+..++.......+ +....+....+.-.+.|.++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d---~~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~ 105 (352)
T cd06174 30 GLSASQAGLIVSAFSLGYALGSLLAGYLSD---RFGRRRVLLLGLLLFALGSLLLAFAS-SLWLLLVGRFLLGLGGGALY 105 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHH---HhCCchhhHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHccccccc
Confidence 345677999999999999999999999875 45555666665555554433332221 22223444445555568899
Q ss_pred hHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 183 PSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 183 P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
|....+-.++.|+|+|++++++++.--++..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 136 (352)
T cd06174 106 PAAAALIAEWFPPKERGRALGLFSAGFGLGA 136 (352)
T ss_pred HhHHHHHHHhCCccchhhhhhHHHHHHHHHH
Confidence 9999999999999999999999998777754
No 117
>PRK09669 putative symporter YagG; Provisional
Probab=97.57 E-value=0.039 Score=52.66 Aligned_cols=127 Identities=13% Similarity=0.130 Sum_probs=74.8
Q ss_pred HHHHHHHhcChhHHHHHHHHHHHHHHHHH----HHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCC
Q 024717 63 TSFFTYIFGDKRIWLLVLAQACLQFSIAL----FWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFR 138 (263)
Q Consensus 63 ~~~~~~i~~d~~il~lg~~qslfEgsmy~----FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~ 138 (263)
++.++.+++||..+.+.....+......+ ..+..+..+ +.++ --+.+....+++..+|..+.+++.. |++
T Consensus 219 ~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~-~~~~~~~~~~i~~ii~~~~~~~l~~---r~g 292 (444)
T PRK09669 219 WKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVL--LRPD-LATLFLVTGMIAGLFGALLSERLLG---KFD 292 (444)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeec--CCHH-HHHHHHHHHHHHHHHHHHHHHHHHH---HhC
Confidence 45678889999888776665554444321 122222222 1112 2245666778888888888887775 456
Q ss_pred chhHHHHHHHHHHHHHH-HhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCC
Q 024717 139 TEDCLLYAFVVLGFVFS-IIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPN 195 (263)
Q Consensus 139 ~~~~l~~~~~~~a~~l~-~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~ 195 (263)
.++.+....++.+.+.. ....+..+....+...+++-.+.|...|....+-.+.+|+
T Consensus 293 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~ 350 (444)
T PRK09669 293 RVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDY 350 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 66665554443332222 1122222322334445667777799999999999999984
No 118
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.56 E-value=0.0079 Score=56.32 Aligned_cols=131 Identities=11% Similarity=0.040 Sum_probs=86.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc-----CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHH
Q 024717 72 DKRIWLLVLAQACLQFSIALFWILWAPTLVA-----DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYA 146 (263)
Q Consensus 72 d~~il~lg~~qslfEgsmy~FVf~WTP~L~~-----~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~ 146 (263)
+++.+++...-.++|...+.-.-...|.+.. +-++...|++.+.+.+..++++.+.+.+.. |++.++.+...
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~d---r~g~r~~l~~~ 84 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSD---RIGRRPVMLAG 84 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCChHHHHHH
Confidence 3667777788888888766655555555432 335567899999999999999999998875 56666666665
Q ss_pred HHHHHHHHHHhhccchhhHHHHHHHHHHH-HHhHhHhhHHHHHHHhcCCCchhHHHHHHhHH
Q 024717 147 FVVLGFVFSIIAYDYQEIGILVALFCLFH-ACVGLILPSLARLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 147 ~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE-~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
..+.+++.......+ +. ..+...-.++ .+.|...|.......++.|+|+|.+.+++...
T Consensus 85 ~~~~~~~~~~~~~~~-~~-~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 144 (406)
T PRK15402 85 VAFFILTCLAILLAQ-SI-EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMAN 144 (406)
T ss_pred HHHHHHHHHHHHHHc-cH-HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHH
Confidence 555543333222111 21 1222222333 33467788888888999999999998887653
No 119
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.49 E-value=0.0061 Score=64.65 Aligned_cols=107 Identities=17% Similarity=0.059 Sum_probs=72.9
Q ss_pred CchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH-HHHHHhh-ccchhhHHHHHHHHHHHHHhHhHhhH
Q 024717 107 VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG-FVFSIIA-YDYQEIGILVALFCLFHACVGLILPS 184 (263)
Q Consensus 107 ~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a-~~l~~~~-~~~~~~~~~~~~Fc~fE~~vG~y~P~ 184 (263)
.-.|++.+.|+++..+++.+.+.+.. +++.++.+....++.+ .++.... ...+.....+..-++.=+..|++.|+
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~D---r~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 123 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLAD---KFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPA 123 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchH
Confidence 34799999999999999999999875 5666666655543332 1111111 11111222233333333455899999
Q ss_pred HHHHHHhcCCCchhHHHHHHhHHHHHHHHHHH
Q 024717 185 LARLRTMYVPNELRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 185 m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~ 216 (263)
...+-.+++|+++|+.+++++..-.++-.++.
T Consensus 124 ~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg 155 (1146)
T PRK08633 124 KYGIIPELVGKENLSRANGLLEAFTIVAILAG 155 (1146)
T ss_pred HHhhhHHhcCcccchhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999888864444
No 120
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.47 E-value=0.011 Score=58.00 Aligned_cols=145 Identities=12% Similarity=0.129 Sum_probs=85.1
Q ss_pred HhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCC-CCchhHHH
Q 024717 69 IFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSS-FRTEDCLL 144 (263)
Q Consensus 69 i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~-~~~~~~l~ 144 (263)
.+++||-+.+.+.-...|..-|..+..|.|.... +-++..-+.+++.+.........+.+++.. | ++.++.+.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaD---r~~G~r~~~~ 92 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGD---KVLGTKRVIM 92 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccchHHHHH
Confidence 3478874445555555565555555566666653 334444577777777655555556666654 4 46666666
Q ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCc--hhHHHHHHhHHHHHHHHHHH
Q 024717 145 YAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNE--LRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 145 ~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e--~Ratvm~~fr~PlN~~v~~~ 216 (263)
...++.++...............+.+..++=++.|++.|....+-.+..|++ +|.++++++..=.|+-..+.
T Consensus 93 ~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~g 166 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFS 166 (500)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHH
Confidence 6555544332222221111112223334444566999999988888888754 35678888888888865444
No 121
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.47 E-value=0.0083 Score=56.45 Aligned_cols=113 Identities=10% Similarity=-0.008 Sum_probs=79.8
Q ss_pred hhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHH
Q 024717 95 LWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFC 172 (263)
Q Consensus 95 ~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc 172 (263)
-..|.+++ +-++.+.|++.+.+.....+++.+.+++.. |++.++.+....++.+++.......+ +....+..-.
T Consensus 30 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~d---r~G~r~~l~~~~~l~~~~~~~~~~a~-~~~~ll~~r~ 105 (393)
T PRK09705 30 PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQ---HVSERRSVAISLLLIAVGALMRELYP-QSALLLSSAL 105 (393)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHH---HhCchHHHHHHHHHHHHHHHHHHHCc-chHHHHHHHH
Confidence 34455544 346778999999999999999999999885 57778888777777765555443222 1122233333
Q ss_pred HHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 173 LFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 173 ~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+-=++.|..+|....+-.++.| |+|+.+++.+..-.|.-
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g 144 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGG 144 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHH
Confidence 3334558889998888888887 77999999999877664
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.46 E-value=0.0025 Score=48.95 Aligned_cols=101 Identities=21% Similarity=0.196 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHH
Q 024717 111 LIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRT 190 (263)
Q Consensus 111 lIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~ 190 (263)
++++.+.+...+++.+.+++.. |.+.++.+.......+.+........ +........++.-.+.|...|....+-.
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d---~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTD---RFGRKPVLLVGLFIFVLSTAMFALSS-NITVLIIARFLQGFGAAFALVAGAALIA 77 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHh---hcchhHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 3445666778888888887764 45555555554444443332222111 2223445566677777899999999999
Q ss_pred hcCCCchhHHHHHHhHHHHHHHHHH
Q 024717 191 MYVPNELRGGMISLSLAPANAAILL 215 (263)
Q Consensus 191 ~~Vp~e~Ratvm~~fr~PlN~~v~~ 215 (263)
+..|+++|+++++.++.--++...+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~ 102 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLL 102 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHH
Confidence 9999999999999999887776433
No 123
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.42 E-value=0.0084 Score=56.57 Aligned_cols=103 Identities=16% Similarity=0.065 Sum_probs=66.3
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHh----
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACV---- 178 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~v---- 178 (263)
+-++.+.|++.++|.+..+++....+.+.. |++.++.+.........+..... ..++ +..+.+..+..
T Consensus 22 ~~s~~~~g~~~s~~~~g~~i~~~~~G~l~D---r~grr~~~~~~~~~~~~~~~~~~-~~~~----~~~l~~~R~l~G~g~ 93 (368)
T TIGR00903 22 DVSKEELGLLAITYPAAFLALTIPSGLLLD---RAFKRWFLFGSLATFAAAAGRLL-DPFN----YEWLLACQLLAALGQ 93 (368)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccchHHHHHHHHHHHHHHHHHH-Hhcc----HHHHHHHHHHHHhHh
Confidence 446678999999999999999999998886 45544444333333322221111 1011 33444444444
Q ss_pred HhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHH
Q 024717 179 GLILPSLARLRTMYVPNELRGGMISLSLAPANAAIL 214 (263)
Q Consensus 179 G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~ 214 (263)
|.+.|+...+ +++.|+|+|+++++++..=.++-.+
T Consensus 94 ~~~~~~~~~~-~~~~~~~~r~~a~~~~~~~~~lG~~ 128 (368)
T TIGR00903 94 PFLLNAFAPA-ASQIREERRDLVISLLSFAMYLGII 128 (368)
T ss_pred HHHHHHHHHH-HHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 4655566655 8899999999999999876666433
No 124
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.38 E-value=0.01 Score=63.34 Aligned_cols=149 Identities=14% Similarity=0.037 Sum_probs=89.3
Q ss_pred HhcChhHHHHHHHHHHHHHH--HHHHHHhhhh--hhccCC---CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchh
Q 024717 69 IFGDKRIWLLVLAQACLQFS--IALFWILWAP--TLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTED 141 (263)
Q Consensus 69 i~~d~~il~lg~~qslfEgs--my~FVf~WTP--~L~~~~---~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~ 141 (263)
++++++...+-+.|.+.... ++.+.+.|.- .+..+. ...-.|++.+.|+++..+.+.+.+.+.. |++.++
T Consensus 7 l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laD---r~~rk~ 83 (1140)
T PRK06814 7 LMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLAD---KYDKAK 83 (1140)
T ss_pred hhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhh---hccHHH
Confidence 45555555554445444432 3333333332 232221 1234799999999999999999999875 556655
Q ss_pred HHHHHHHHHH--HHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHHHHh
Q 024717 142 CLLYAFVVLG--FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLL 219 (263)
Q Consensus 142 ~l~~~~~~~a--~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l~~ 219 (263)
.+.....+.. ..+........+....+.+-++.-++.++++|+...+-.+++|+|+|+.+++++..=.|+-.++.-..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l 163 (1140)
T PRK06814 84 LAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTII 163 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHH
Confidence 5433222111 11111111112222334444444555689999999999999999999999999999999875554443
Q ss_pred h
Q 024717 220 R 220 (263)
Q Consensus 220 g 220 (263)
|
T Consensus 164 ~ 164 (1140)
T PRK06814 164 G 164 (1140)
T ss_pred H
Confidence 3
No 125
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.34 E-value=0.0038 Score=60.11 Aligned_cols=112 Identities=16% Similarity=0.194 Sum_probs=75.5
Q ss_pred hhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH-HHHhhc---cchhhHHHHHHH
Q 024717 98 PTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV-FSIIAY---DYQEIGILVALF 171 (263)
Q Consensus 98 P~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~-l~~~~~---~~~~~~~~~~~F 171 (263)
|.+.+ +-++.+.|++.+.|+.+..++..+.+.+.. |+++++.+....++.++. +..... ..++....+..-
T Consensus 53 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~D---r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 129 (467)
T PRK09556 53 NDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYAD---GKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALW 129 (467)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhh---ccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 44444 346778999999999999999999998875 567777666554444322 222211 111211222223
Q ss_pred HHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 172 CLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 172 c~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+.=++.|..+|...++-+++.|+++|+++++++..-.|+-
T Consensus 130 ~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG 170 (467)
T PRK09556 130 ALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLG 170 (467)
T ss_pred HHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchh
Confidence 33334447889999999999999999999999998766653
No 126
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.30 E-value=0.079 Score=52.11 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=61.0
Q ss_pred CchHHHHHHHHHHHHHh----HhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccch--------hhHHHHHHHHHH
Q 024717 107 VHLGLIFPSLLGARMLG----STVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQ--------EIGILVALFCLF 174 (263)
Q Consensus 107 ~plGlIFs~FM~~~mlG----S~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~--------~~~~~~~~Fc~f 174 (263)
.|-+++.+.=-+..++. +.+++++.. |.++...+.+.++..+.++.+...... +....+..+.+.
T Consensus 316 i~~~~~~s~n~i~iil~~p~~~~~~~~l~~---r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~ 392 (500)
T PRK09584 316 VEPEQYQALNPFWIMIGSPILAAIYNKMGD---RLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQ 392 (500)
T ss_pred ECHHHHHHHhHHHHHHHHHHHHHHHHHhCc---CCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHH
Confidence 45555444333233444 334455432 445555666777777766655321110 012345666666
Q ss_pred HHHhHhHhhHHHHHHHhcCCCchhHHHHHHhH
Q 024717 175 HACVGLILPSLARLRTMYVPNELRGGMISLSL 206 (263)
Q Consensus 175 E~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr 206 (263)
-+.-++..|....+-.++.|++.|+.+||.+.
T Consensus 393 ~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~ 424 (500)
T PRK09584 393 SIGELMISGLGLAMVAQLVPQRLMGFIMGSWF 424 (500)
T ss_pred HHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 66779999999999999999999999999874
No 127
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.30 E-value=0.014 Score=55.98 Aligned_cols=113 Identities=9% Similarity=0.024 Sum_probs=75.4
Q ss_pred hhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHH
Q 024717 96 WAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCL 173 (263)
Q Consensus 96 WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~ 173 (263)
..|.+.+ +-++...|++.+.+.+..++++.+.+.+.. |.+.++.+.....+.+++....... ++....+....+
T Consensus 42 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l 117 (496)
T PRK03893 42 VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGD---RYGRRLAMVISIVLFSVGTLACGFA-PGYWTLFIARLV 117 (496)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHH
Confidence 3466654 335566899999999999999999998875 4566666655554444333222211 121222333333
Q ss_pred HHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 174 FHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 174 fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.-.+.|..+|....+-.++.|+|+|+.+++++..--|+-
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 156 (496)
T PRK03893 118 IGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIG 156 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 333347788999999999999999999999998766664
No 128
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.30 E-value=0.19 Score=48.64 Aligned_cols=129 Identities=11% Similarity=0.044 Sum_probs=75.6
Q ss_pred HHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCch
Q 024717 63 TSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE 140 (263)
Q Consensus 63 ~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~ 140 (263)
++.++.+++||..+.+-....++....+++- ...+.+.+ .+++...+++.+...++.+++..+.+++.. |++.+
T Consensus 221 ~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~-~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~---r~gkk 296 (473)
T PRK10429 221 KDIVALIYKNDQLSCLLGMALAYNIASNIIN-GFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVK---SLSRR 296 (473)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh-hheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCcH
Confidence 4567778899998887777777765555432 22333333 223333556666666888888888888774 56666
Q ss_pred hHHHHHHHHHHHHHHHh-h---ccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCC
Q 024717 141 DCLLYAFVVLGFVFSII-A---YDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPN 195 (263)
Q Consensus 141 ~~l~~~~~~~a~~l~~~-~---~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~ 195 (263)
+.+..+..+..++.... . .+.......+....++-.+.|..++....+-.+.+|+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~ 355 (473)
T PRK10429 297 ILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDY 355 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 66655544433222111 1 1222212223333445566688888888888898884
No 129
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.28 E-value=0.0028 Score=60.62 Aligned_cols=105 Identities=12% Similarity=0.141 Sum_probs=71.7
Q ss_pred CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH-HHHhhccchhhHHHHHHHHHHHHHhHhHhh
Q 024717 105 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV-FSIIAYDYQEIGILVALFCLFHACVGLILP 183 (263)
Q Consensus 105 ~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~-l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P 183 (263)
++...|+++++|.++.+++....+.+.. |++.++.+....++.+++ +..+..........+..-.+.-++.|..+|
T Consensus 74 s~~~~g~~~s~~~~~~~~~~~~~g~l~d---r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~ 150 (465)
T TIGR00894 74 SGALQGLILSSHFYGQIIIQIPVGYLAG---KYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSP 150 (465)
T ss_pred CHHHhhHHHHHHHHHHHHHHcchHHHHH---HhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchh
Confidence 4566899999999999999999998875 456666665555544432 222211111111122222333344588999
Q ss_pred HHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 184 SLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 184 ~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
....+-.++.|+++|+++++++..=-++-
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 179 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLG 179 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998866654
No 130
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.27 E-value=0.019 Score=56.94 Aligned_cols=139 Identities=12% Similarity=0.086 Sum_probs=88.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCC-CchhHHHHHHHH
Q 024717 74 RIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSF-RTEDCLLYAFVV 149 (263)
Q Consensus 74 ~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~-~~~~~l~~~~~~ 149 (263)
.++.+-.++ ..|...|--+..|.|.... +-++..-+.++..+.+...+++.+.+++.. |+ +.++.+.+..++
T Consensus 10 ~l~~l~~~~-~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaD---RilGrrr~iliG~il 85 (493)
T PRK15462 10 AIYYVVALQ-IWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLAD---KVLGNRMAVMLGALL 85 (493)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccCcHHHHHHHHHH
Confidence 344444444 5555444445567776644 335666788999999998999888888875 45 777766655544
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCc--hhHHHHHHhHHHHHHHHHHH
Q 024717 150 LGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNE--LRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 150 ~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e--~Ratvm~~fr~PlN~~v~~~ 216 (263)
.++...............+.+..++-...|.+.|.+..+-++..|++ +|.+.++++..=-|+.-.+.
T Consensus 86 ~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~ia 154 (493)
T PRK15462 86 MAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIA 154 (493)
T ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHH
Confidence 44322222111111011233333444567999999999999999876 79999999998888754333
No 131
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.27 E-value=0.001 Score=60.00 Aligned_cols=112 Identities=20% Similarity=0.226 Sum_probs=76.1
Q ss_pred hhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHH
Q 024717 97 APTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF 174 (263)
Q Consensus 97 TP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~f 174 (263)
.|.+.+ +-++...|++.+.+.+...+++.+.+++.. |.+.++.+....++.+++........ +....+....+.
T Consensus 18 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 93 (379)
T TIGR00881 18 MPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSD---RSNPRVFLPIGLILCAIVNLFFGFST-SLWVMAALWALN 93 (379)
T ss_pred hHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHH---hhCCeehhHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHH
Confidence 344444 446678999999999999999999998875 45666666666555543333322222 211222223333
Q ss_pred HHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 175 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 175 E~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
-.+.|..+|....+-.+..|+|+|+++++++..=-|+-
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 131 (379)
T TIGR00881 94 GIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVG 131 (379)
T ss_pred HhhccccCCchHHHHHHhcCHhhheeeEeehhccchhH
Confidence 34457889999999999999999999999887766664
No 132
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.27 E-value=0.019 Score=56.44 Aligned_cols=172 Identities=13% Similarity=0.081 Sum_probs=98.2
Q ss_pred cChhHHHHHHHHHHHHH-HHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHH
Q 024717 71 GDKRIWLLVLAQACLQF-SIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAF 147 (263)
Q Consensus 71 ~d~~il~lg~~qslfEg-smy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~ 147 (263)
+.||-+.+.+.-...|. +-|...-....-+.+ +-++..-+++...|+....+...+.+++.. +.++.++.+....
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laD--r~~G~r~~~~~g~ 88 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGD--HLLGTKRTIVLGA 88 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhh--hccchHHHHHHHH
Confidence 34555555444445554 444444344444433 335556788888888887777777777764 1277777766655
Q ss_pred HHHHHHHHHhhccchhhHHHH-HHHHHHHHHhHhHhhHHHHHHHhcCCCc--hhHHHHHHhHHHHHHHHHHHHHhhhhc-
Q 024717 148 VVLGFVFSIIAYDYQEIGILV-ALFCLFHACVGLILPSLARLRTMYVPNE--LRGGMISLSLAPANAAILLFLLLRGFY- 223 (263)
Q Consensus 148 ~~~a~~l~~~~~~~~~~~~~~-~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e--~Ratvm~~fr~PlN~~v~~~l~~g~~~- 223 (263)
++.++........... ...+ .+..+.=++.|++.|....+-.+..|+| +|+++++++..--|+-..+.-..+++-
T Consensus 89 ~~~~~g~~~~~~~~~~-~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~ 167 (489)
T PRK10207 89 IVLAIGYFMTGMSLLK-PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIA 167 (489)
T ss_pred HHHHHHHHHHHHhccc-hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 4444322222112111 1123 3333333445999999999999999877 568899999999999765553333222
Q ss_pred cccchhHHHHHHHHHHHHHHHH
Q 024717 224 RNIENAAMVAFAALGLFIAAGC 245 (263)
Q Consensus 224 ~~~~~~~~~~~~~~~l~l~~~~ 245 (263)
++.+=...+..+.++++.....
T Consensus 168 ~~~gw~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 168 DKFGYSVTYNLCGAGLIIALLV 189 (489)
T ss_pred HhhChHHHHHHHHHHHHHHHHH
Confidence 2233233454444444444433
No 133
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.26 E-value=0.019 Score=52.31 Aligned_cols=119 Identities=14% Similarity=0.166 Sum_probs=76.0
Q ss_pred HHHHHhhhhh-hcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHH
Q 024717 90 ALFWILWAPT-LVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGI 166 (263)
Q Consensus 90 y~FVf~WTP~-L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~ 166 (263)
+...--+.|. +++ +-++...|++++.+++..++++.+.+.+.. |.+.++.+....++.+++........++ ..
T Consensus 17 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~i~~~~~~~~~~~-~~ 92 (366)
T TIGR00886 17 WFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVD---KFGPRYTTTLSLLLLAIPCLWAGLAVQS-YS 92 (366)
T ss_pred HHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHH---HhCchHHHHHHHHHHHHHHHHHHHHhhh-HH
Confidence 3333445553 433 446677899999999999999999999885 5666666666555555443333211101 12
Q ss_pred HHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 167 LVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 167 ~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.+...-+++...+..++....+-.+..|+|+|+++++++..--|+-
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 138 (366)
T TIGR00886 93 VLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMG 138 (366)
T ss_pred HHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHH
Confidence 2333344444444445556778889999999999999988555543
No 134
>PRK11043 putative transporter; Provisional
Probab=97.25 E-value=0.03 Score=52.19 Aligned_cols=133 Identities=9% Similarity=0.019 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH
Q 024717 75 IWLLVLAQACLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV 153 (263)
Q Consensus 75 il~lg~~qslfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~ 153 (263)
+..++.+..+...+..++.=.+.+...+ +.++...|++.+.+++..++++.+.+.+.. |++.++.+.....+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSD---RYGRKPVLLAGLSLFALG 84 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHh---hcCCcHHHHHHHHHHHHH
Confidence 3444545444444444443333222222 446677899999999999999999999885 566666666555444433
Q ss_pred HHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 154 FSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 154 l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
........ +....+....+.=...|...|....+-.+..|+++|.++.+....-.++
T Consensus 85 ~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (401)
T PRK11043 85 SLGMLWVE-SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVAL 141 (401)
T ss_pred HHHHHHhc-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 33222221 2111122222222233556777777888999999999988876544443
No 135
>PRK10133 L-fucose transporter; Provisional
Probab=97.21 E-value=0.047 Score=52.63 Aligned_cols=113 Identities=10% Similarity=0.097 Sum_probs=78.4
Q ss_pred hhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh--hccchhhHHHHHHH
Q 024717 96 WAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII--AYDYQEIGILVALF 171 (263)
Q Consensus 96 WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~--~~~~~~~~~~~~~F 171 (263)
-.|.+++ +-++...|++.+.|.+..++++...+.+.. |++.++.+.....+.+++.... ....++....+.+.
T Consensus 48 ~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~d---r~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r 124 (438)
T PRK10133 48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMK---KLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGL 124 (438)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 3566654 456778999999999999999999999886 6777788877776666544332 11122222233344
Q ss_pred HHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 172 CLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 172 c~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
.+.=++.|...++...+-.+.-|+++|...+|+++.=-.+
T Consensus 125 ~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~ 164 (438)
T PRK10133 125 FIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSF 164 (438)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHH
Confidence 4444566999999988888887788787788887754333
No 136
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.18 E-value=0.044 Score=53.41 Aligned_cols=116 Identities=14% Similarity=0.031 Sum_probs=76.0
Q ss_pred hhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHH-hhccchhhHHHHHHHHH
Q 024717 97 APTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI-IAYDYQEIGILVALFCL 173 (263)
Q Consensus 97 TP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~-~~~~~~~~~~~~~~Fc~ 173 (263)
.|.+.+ +.+..+.+++.++|++...++...++++.. +++.++.+.....+.+++... ...++ .. .+...=+
T Consensus 29 ~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D---~~Grk~~l~~~~~~~~~~~~~~~~a~~--~~-~li~~r~ 102 (495)
T PRK14995 29 APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGD---RIGFKRLLMLGGTLFGLASLAAAFSPT--AS-WLIATRA 102 (495)
T ss_pred HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHcCC--HH-HHHHHHH
Confidence 566655 345567899999999999999998888875 567777776666555433322 22222 11 1222222
Q ss_pred HHH-HhHhHhhHHHH-HHHhcCCCchhHHHHHHhHHHHHHHHHHHHH
Q 024717 174 FHA-CVGLILPSLAR-LRTMYVPNELRGGMISLSLAPANAAILLFLL 218 (263)
Q Consensus 174 fE~-~vG~y~P~m~~-Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l~ 218 (263)
++. +.|...|.... +...+.|+|+|+++++++...-++--++.-.
T Consensus 103 l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~ 149 (495)
T PRK14995 103 LLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPL 149 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 33677786554 5566678999999999999999986444433
No 137
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.16 E-value=0.01 Score=55.41 Aligned_cols=76 Identities=14% Similarity=0.259 Sum_probs=54.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHH
Q 024717 72 DKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVV 149 (263)
Q Consensus 72 d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~ 149 (263)
||..+.+.....++-..+..+.-..++-+.+ +-++...|++++.+.++..+++.+.+++.. |.+.++.+.....+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~D---r~grr~~~~~~~~~ 77 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISD---KLGLKKHLLWIISG 77 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHH
Confidence 6778888877777777766666544444433 446677899999999999999999999886 56666666544333
Q ss_pred H
Q 024717 150 L 150 (263)
Q Consensus 150 ~ 150 (263)
.
T Consensus 78 ~ 78 (396)
T TIGR00882 78 L 78 (396)
T ss_pred H
Confidence 3
No 138
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.16 E-value=0.017 Score=54.99 Aligned_cols=107 Identities=20% Similarity=0.134 Sum_probs=72.2
Q ss_pred CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhc----------cchhh-HHHHHHHHH
Q 024717 105 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAY----------DYQEI-GILVALFCL 173 (263)
Q Consensus 105 ~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~----------~~~~~-~~~~~~Fc~ 173 (263)
++...|++.+.+++..++|+.+.+.+.. +++.++.+.....+..++...... ++.+. ...+.+=++
T Consensus 53 ~~~~~~~~~s~~~ig~~~~~~~~G~l~d---r~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 53 ANSLLGFCVASALIGCIIGGALGGYCSN---RFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 4567899999999999999999999885 566666665544443322221111 11111 111122233
Q ss_pred HHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHH
Q 024717 174 FHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAIL 214 (263)
Q Consensus 174 fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~ 214 (263)
.=++.|..+|....+-+++.|+++|+.++++++.-.++-.+
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 33555889999999999999999999999999987666433
No 139
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.11 E-value=0.039 Score=57.39 Aligned_cols=128 Identities=15% Similarity=0.080 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh
Q 024717 80 LAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII 157 (263)
Q Consensus 80 ~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~ 157 (263)
.+..+.++.-..-+-...|.+.. +.+....|++.+++++..++|+.+.+.+.. +++.++.+.+..++.+++..+.
T Consensus 173 ~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsD---R~GRR~~lii~lil~~i~~ll~ 249 (742)
T TIGR01299 173 GLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLAD---KLGRKQCLLICLSVNGFFAFFS 249 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHH
Confidence 33334444323334445666654 345567899999999999999999999886 5666666655544444222222
Q ss_pred hccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 158 AYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 158 ~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
.... +....+.+-++.=++.|..+|....+-+++.|++.|++++++++.-..+
T Consensus 250 afa~-s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~i 302 (742)
T TIGR01299 250 SFVQ-GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMI 302 (742)
T ss_pred HHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 1111 2222334444555566889999999999999999999999998876554
No 140
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.09 E-value=0.073 Score=52.46 Aligned_cols=236 Identities=11% Similarity=0.063 Sum_probs=143.9
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCC----cch---hh-------HH-----
Q 024717 4 FESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMA----FDD---YR-------TS----- 64 (263)
Q Consensus 4 ~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~----~~~---~~-------~~----- 64 (263)
++-+..+..+-+++++.+. ..||.++|.+...+.++-.++=...-.|++.++ +++ ++ .+
T Consensus 172 g~q~g~v~~mp~sg~lc~s--~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~v 249 (466)
T KOG2532|consen 172 GSQLGTIITMPVSGLLCES--SLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPV 249 (466)
T ss_pred HHHHHHHHHHHhHHHHhcc--CCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCCCCC
Confidence 3446667777899999987 379999999988777766655444445555431 111 11 01
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccCC-------CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCC
Q 024717 65 FFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG-------REVHLGLIFPSLLGARMLGSTVFPWLISGPSSF 137 (263)
Q Consensus 65 ~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~~-------~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~ 137 (263)
-+++|++|+.++.+-+ ..+.|...+.+...|.|++.++- .+.--.+-+....++..+++.+..++..+ .+
T Consensus 250 P~~~i~ts~~vwai~~-~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~--~l 326 (466)
T KOG2532|consen 250 PYKAILTSPPVWAIWI-SAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR--IL 326 (466)
T ss_pred CHHHHHcCHHHHHHHH-HHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc--cC
Confidence 2889999999988655 55666777777789999998731 12222344555666777777887777652 23
Q ss_pred Cchh---H-HHHHHHHHHHHHHHhhccchhhH-HHHHHHHHHHHHhHhHhhHHHHHHHhcC-CCchhHHHHHHhHHHHHH
Q 024717 138 RTED---C-LLYAFVVLGFVFSIIAYDYQEIG-ILVALFCLFHACVGLILPSLARLRTMYV-PNELRGGMISLSLAPANA 211 (263)
Q Consensus 138 ~~~~---~-l~~~~~~~a~~l~~~~~~~~~~~-~~~~~Fc~fE~~vG~y~P~m~~Lr~~~V-p~e~Ratvm~~fr~PlN~ 211 (263)
.+.. . =.+++.+.++++.+..+.+++.. ..+.++.+...+.|...+ |..+.-.. -++.=+.+|+.-+.--++
T Consensus 327 s~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~--Gf~~~~~~~apq~a~~l~g~~~~~~~~ 404 (466)
T KOG2532|consen 327 SETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNIS--GFYKNHQDIAPQHAGFVMGIINFVGAL 404 (466)
T ss_pred chHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchh--hhHhhhhhccchHHHHHHHHHHHHHHH
Confidence 2221 2 22467777777777665544322 345566666666666654 44555554 778889999998888887
Q ss_pred HHHHH-HHhhhhccccc-hhHHHHHHHHHHHHHHHHH
Q 024717 212 AILLF-LLLRGFYRNIE-NAAMVAFAALGLFIAAGCM 246 (263)
Q Consensus 212 ~v~~~-l~~g~~~~~~~-~~~~~~~~~~~l~l~~~~~ 246 (263)
.-.+. ++.|-..++-+ ++-..+|...+..+..+.+
T Consensus 405 ~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i 441 (466)
T KOG2532|consen 405 AGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNI 441 (466)
T ss_pred HHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhch
Confidence 63322 22232222212 2445555566666666553
No 141
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.02 E-value=0.034 Score=51.00 Aligned_cols=110 Identities=17% Similarity=0.138 Sum_probs=69.3
Q ss_pred hhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHH
Q 024717 97 APTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF 174 (263)
Q Consensus 97 TP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~f 174 (263)
.|.+.+ +-++...|++.+.+.+..++++.+.+++.. |++.++.+.....+...+......++ ....+...++.
T Consensus 23 lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d---r~g~r~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~ 97 (355)
T TIGR00896 23 LPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLAR---RFGEERSVAAGLLLIAAGILIRSAPG--TALLFAGTALI 97 (355)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH---HhCchHHHHHHHHHHHHHHHHHHhcc--HHHHHHHHHHH
Confidence 344444 335667899999999999999999999885 56666666655544433332221122 11122222333
Q ss_pred HHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 175 HACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 175 E~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
-...|...+....+-.++.| ++|+.+++++..=-|+-
T Consensus 98 g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 134 (355)
T TIGR00896 98 GVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGG 134 (355)
T ss_pred HHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHH
Confidence 34446666666666677776 58999999998766654
No 142
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=96.98 E-value=0.024 Score=52.63 Aligned_cols=105 Identities=19% Similarity=0.249 Sum_probs=73.4
Q ss_pred CCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh-h-ccchhhHHHHHHHHHHHHHhHhHhh
Q 024717 106 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII-A-YDYQEIGILVALFCLFHACVGLILP 183 (263)
Q Consensus 106 ~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~-~-~~~~~~~~~~~~Fc~fE~~vG~y~P 183 (263)
+...|++.+.+.+..++++.+.+.+.. |++.++.+....++.+++.... . .........+..-++.-++.|..+|
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d---~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 146 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSD---RFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASA 146 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhh---hhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHh
Confidence 577999999999999999999999875 5666666655444443222222 1 1111111223333444455688899
Q ss_pred HHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 184 SLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 184 ~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
....+-.++.|+++|+.++++++.-.|+-.
T Consensus 147 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 176 (481)
T TIGR00879 147 LVPMYLSEIAPKALRGALTSLYQLAITFGI 176 (481)
T ss_pred HHHHHHHccCChhhhhhhhhHHHHHHHHHH
Confidence 999999999999999999999988777753
No 143
>TIGR00898 2A0119 cation transport protein.
Probab=96.97 E-value=0.027 Score=54.29 Aligned_cols=104 Identities=19% Similarity=0.232 Sum_probs=72.3
Q ss_pred CCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHH
Q 024717 106 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSL 185 (263)
Q Consensus 106 ~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m 185 (263)
+...|++.+.+++..++|+.+++.+.. |++.++.+....++.+++........ +....+....+.=+..|..+|..
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~D---r~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~r~l~G~~~~~~~~~~ 201 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSD---RFGRKKVLLLSTLVTAVSGVLTAFSP-NYTVFLVFRLLVGMGIGGIWVQA 201 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhh---hccchHHHHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHhhccchHHHH
Confidence 566899999999999999999999875 46666666665555543333222211 21122222333333447789999
Q ss_pred HHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 186 ARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 186 ~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
..+-.+++|+++|+.++++++.-.++-.
T Consensus 202 ~~~~~e~~~~~~r~~~~~~~~~~~~~g~ 229 (505)
T TIGR00898 202 VVLNTEFLPKKQRAIVGTLIQVFFSLGL 229 (505)
T ss_pred HHHhheecChhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999977666543
No 144
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.90 E-value=0.26 Score=48.77 Aligned_cols=180 Identities=14% Similarity=0.094 Sum_probs=99.3
Q ss_pred CccchHHHHHHHHHHHHHHHhcccccCCC-CC-c----------chhh----HHHHHHHhc-ChhHHHHHHHHHHHHHHH
Q 024717 27 GVVPSSTASVFLSILGIICVSRGWTENPK-MA-F----------DDYR----TSFFTYIFG-DKRIWLLVLAQACLQFSI 89 (263)
Q Consensus 27 g~~aPF~~a~~~l~i~~ili~~~w~ENyg-~~-~----------~~~~----~~~~~~i~~-d~~il~lg~~qslfEgsm 89 (263)
+.+..|.+++++++++.++....-+|... ++ + ++.. ++-++.+.+ -|.+..+.++|.+-....
T Consensus 195 ~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~ 274 (477)
T TIGR01301 195 NLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAW 274 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 45678999999999998888877777432 10 0 0001 122333333 366778999999999999
Q ss_pred HHHHHhhhhhhcc---CCC--CC---chHHH-----HHHHHHHHHHhHhhhhhhhcCCCCCCc-hhHHHHHHHHHHHHHH
Q 024717 90 ALFWILWAPTLVA---DGR--EV---HLGLI-----FPSLLGARMLGSTVFPWLISGPSSFRT-EDCLLYAFVVLGFVFS 155 (263)
Q Consensus 90 y~FVf~WTP~L~~---~~~--~~---plGlI-----Fs~FM~~~mlGS~~f~~l~~~~~~~~~-~~~l~~~~~~~a~~l~ 155 (263)
|-|++.-|+...+ +++ +. +-|.= -..+-+...+.|.+.+.+.+ +.+. +..-....++.++|+.
T Consensus 275 f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~---~~g~~k~~~~~s~~~~~~~l~ 351 (477)
T TIGR01301 275 FPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCR---GWGAGKRLWGIVNIILAICLA 351 (477)
T ss_pred HHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccchhHHHHHHHHHHHHHH
Confidence 9999999998864 111 11 12211 11122222355555555543 3332 2222334344444444
Q ss_pred Hhh-ccc------h----------hhHHHHHHHHHHHHHhHhHhhHHH----HHHHhcCCCchh--HHHHHHhHHHHHHH
Q 024717 156 IIA-YDY------Q----------EIGILVALFCLFHACVGLILPSLA----RLRTMYVPNELR--GGMISLSLAPANAA 212 (263)
Q Consensus 156 ~~~-~~~------~----------~~~~~~~~Fc~fE~~vG~y~P~m~----~Lr~~~Vp~e~R--atvm~~fr~PlN~~ 212 (263)
... ... + ... ..+...+.-+.+|+-|-++. .|-++++|++.| +..||+ +|.+
T Consensus 352 ~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgi----lN~~ 426 (477)
T TIGR01301 352 ATVLVTYVAKNSRYYDGDGESLPPPTG-IKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGV----LNLA 426 (477)
T ss_pred HHHHHHhhhhccccccccccccCcchh-hHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhH----HHHH
Confidence 332 110 0 000 12334444466777777665 578899996544 777765 5777
Q ss_pred HH
Q 024717 213 IL 214 (263)
Q Consensus 213 v~ 214 (263)
+|
T Consensus 427 I~ 428 (477)
T TIGR01301 427 IV 428 (477)
T ss_pred HH
Confidence 65
No 145
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=96.89 E-value=0.075 Score=48.40 Aligned_cols=105 Identities=15% Similarity=0.100 Sum_probs=62.3
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHH-HHHHHHHHHH-HHHhhccchhhHHHHHHHHHHHHHhHh
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCL-LYAFVVLGFV-FSIIAYDYQEIGILVALFCLFHACVGL 180 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l-~~~~~~~a~~-l~~~~~~~~~~~~~~~~Fc~fE~~vG~ 180 (263)
+.++...|++.+.+.+..++.+.+.+.+.. |.+.++.+ ....+..+.+ +.....++ ....+..-.+.....+.
T Consensus 29 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~D---r~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~~ 103 (375)
T TIGR00899 29 RARPAMIGLFYTGSAIVGIAVSQLLATRSD---YQGDRKGLILFCCLLAALACLLFAWNRN--YFLLLVLGVLLSSFAST 103 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccCCchHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHhhhhh
Confidence 446778999999999999999998888764 45544433 3333333322 22222121 11111111222344467
Q ss_pred HhhHHHHHHHhcCCCchhHHH--HHHhHHHHHHH
Q 024717 181 ILPSLARLRTMYVPNELRGGM--ISLSLAPANAA 212 (263)
Q Consensus 181 y~P~m~~Lr~~~Vp~e~Ratv--m~~fr~PlN~~ 212 (263)
+.|....+-.++.|++.|+.. ++..+.=-|+-
T Consensus 104 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 137 (375)
T TIGR00899 104 ANPQLFALAREHADRTGREAVMFSSVMRAQISLA 137 (375)
T ss_pred hHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHH
Confidence 889988888899999888755 45655544443
No 146
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.88 E-value=0.098 Score=49.76 Aligned_cols=97 Identities=19% Similarity=0.212 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh-hcc-chhhHH-HHHHHHHHHH----HhHhHhhH
Q 024717 112 IFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII-AYD-YQEIGI-LVALFCLFHA----CVGLILPS 184 (263)
Q Consensus 112 IFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~-~~~-~~~~~~-~~~~Fc~fE~----~vG~y~P~ 184 (263)
+|+.-.+...+|+.+++.+.. |++.++.+.......+++.... ..+ ...+.. ....+++.-+ ..|..+|.
T Consensus 68 ~~~~~~~~~~ig~~~~G~l~D---r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~ 144 (432)
T PRK10406 68 VFAAGFLMRPIGGWLFGRIAD---KHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGT 144 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---hcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhh
Confidence 343334555699999998875 6777777766665554333222 222 211111 1223333333 34779999
Q ss_pred HHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 185 LARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 185 m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
..++-++..|+++|+..+++.+.=.|.
T Consensus 145 ~~~~i~e~~p~~~rg~~~~~~~~~~~~ 171 (432)
T PRK10406 145 SATYMSEVAVEGRKGFYASFQYVTLIG 171 (432)
T ss_pred HHHHHHHhCCCCcccHHHHHHHHHHHH
Confidence 999999999999999999988765555
No 147
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.84 E-value=0.069 Score=53.09 Aligned_cols=198 Identities=14% Similarity=0.074 Sum_probs=124.1
Q ss_pred hHHHHHHHHHHHHHHhhh---cccCCccchHHHHHHHHHHHHHHHhcccccCCCC------Ccc----------------
Q 024717 5 ESAALIGGQVLANWLVGI---DVKKGVVPSSTASVFLSILGIICVSRGWTENPKM------AFD---------------- 59 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~---~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~------~~~---------------- 59 (263)
+++-.|.+|++|..+.+. ....||+..|++-.++.++.++++.+.-++|+-+ +++
T Consensus 179 ~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~ 258 (495)
T KOG2533|consen 179 ASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIE 258 (495)
T ss_pred cchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcc
Confidence 456667778777775320 1136899999999999999999988877777642 110
Q ss_pred -hhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccCC---CCCchHHHHHHHHHHHHHhHhhhhhhhcCCC
Q 024717 60 -DYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADG---REVHLGLIFPSLLGARMLGSTVFPWLISGPS 135 (263)
Q Consensus 60 -~~~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~~---~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~ 135 (263)
+.++..+...++||+++...+.+.+...+.|.|. .|.|.+.++. ++..-+..-.-+=+.-.+|..+++.+..
T Consensus 259 ~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~-~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsd--- 334 (495)
T KOG2533|consen 259 NKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFS-YWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSD--- 334 (495)
T ss_pred cccCHHHHHHHHhchhHHHHHHHHHHHhhccccHH-HHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHH---
Confidence 0123457888999999999999999999999774 7999987741 2333334444444555566666665553
Q ss_pred CCCchhHHHHHHHHHH-----HH-HHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHH
Q 024717 136 SFRTEDCLLYAFVVLG-----FV-FSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAP 208 (263)
Q Consensus 136 ~~~~~~~l~~~~~~~a-----~~-l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~P 208 (263)
++++...+...+.+.. +. ...... ...+....+++..-...+...|+.....++......|+....---+.
T Consensus 335 r~~~~~~~~~~~~~~~~~~~~~g~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~ 411 (495)
T KOG2533|consen 335 RLKTIFARRLLFIVFLCLYAIIGAISLLAA--AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIID 411 (495)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHhh--ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhc
Confidence 2211111111111111 11 121211 11233456666667777888999999999998887777665543333
No 148
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=96.80 E-value=0.57 Score=46.10 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 166 ILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 166 ~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.....+.+.-..-++..|.....-.+..|++.++.+|+.+..=.++-
T Consensus 381 ~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig 427 (489)
T PRK10207 381 FIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAA 427 (489)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 34556666666679999999999999999999999999988666554
No 149
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=96.77 E-value=0.65 Score=45.87 Aligned_cols=143 Identities=14% Similarity=0.168 Sum_probs=93.1
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCch-
Q 024717 65 FFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE- 140 (263)
Q Consensus 65 ~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~- 140 (263)
.++++.++|.+...-+...++.-.+.+..-+ ...+.. +-+..++..+.-.-.+...+|+.+++++.. |++++
T Consensus 273 t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~-~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~---r~g~k~ 348 (477)
T PF11700_consen 273 TFKEIRKLRQLFLFLIAYFLYSDGVNTIISF-AGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQD---RFGPKT 348 (477)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCch
Confidence 4677889999999888777777666554433 333322 345667888888889999999999998875 56665
Q ss_pred -hHHHHHHHHH-HHHHHHhh-----c-cchhhHHHHHHHH-HHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 141 -DCLLYAFVVL-GFVFSIIA-----Y-DYQEIGILVALFC-LFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 141 -~~l~~~~~~~-a~~l~~~~-----~-~~~~~~~~~~~Fc-~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
+.+....+.. .+++.... . ..++ +..+|.+= ++=.+.|-..+.--++=+|++|+++.+.-+|+|-+==..
T Consensus 349 ~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~-~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 349 KRTLLISLILWIIIPLYGLFGFWPSFFGLKS-PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA 427 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcccCccc-HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 5554444333 23333222 0 0111 12233222 222334788888999999999999999999999874444
Q ss_pred H
Q 024717 212 A 212 (263)
Q Consensus 212 ~ 212 (263)
.
T Consensus 428 s 428 (477)
T PF11700_consen 428 S 428 (477)
T ss_pred H
Confidence 3
No 150
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.77 E-value=0.016 Score=57.16 Aligned_cols=132 Identities=14% Similarity=0.244 Sum_probs=91.0
Q ss_pred CCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH-HHHHHhhccchhhHHHHHHHHHHHHHh----Hh
Q 024717 106 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG-FVFSIIAYDYQEIGILVALFCLFHACV----GL 180 (263)
Q Consensus 106 ~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a-~~l~~~~~~~~~~~~~~~~Fc~fE~~v----G~ 180 (263)
+.+.|+|+++|-...+++..-...+.. |++.++.+..+.++++ .++..|...+.. ++.+++..+.- |.
T Consensus 72 ~~~k~~i~ss~~~G~i~~~iP~g~l~~---k~G~r~v~~~~~~~sa~~t~l~P~aa~~~----~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 72 STEKGLIFSSFFWGYILGQIPGGYLAD---KFGARRVFFISGLISALLTLLTPLAASIG----FYLLLVLRFLQGLGQGV 144 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHH---HcCchHHHHHHHHHHHHHHHHHHHHHHhc----chhhHHHHHHhHHHHhH
Confidence 456899999999999999998888875 6888888888877777 666767433322 34556666555 79
Q ss_pred HhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHHH-Hhhhhccc-cc-hhHHHHHHHHHHHHHHH
Q 024717 181 ILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFL-LLRGFYRN-IE-NAAMVAFAALGLFIAAG 244 (263)
Q Consensus 181 y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l-~~g~~~~~-~~-~~~~~~~~~~~l~l~~~ 244 (263)
.||+|+.+=+|..|.+.|++..++.-.=..+-+++.+ ..|-.-+. .+ .+.-..+|.+++.....
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~ 211 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFIL 211 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHH
Confidence 9999999999999999999998875554444433333 22222222 33 34445566666555543
No 151
>PRK09528 lacY galactoside permease; Reviewed
Probab=96.73 E-value=0.031 Score=52.77 Aligned_cols=75 Identities=13% Similarity=0.210 Sum_probs=58.7
Q ss_pred HhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHH
Q 024717 69 IFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYA 146 (263)
Q Consensus 69 i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~ 146 (263)
..+||+.+.+.+...++..+.+.++-.+.+-+.+ +-+....|++++.+.++.++++.+.+.+.. |++.++.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~D---r~g~r~~~~~~ 82 (420)
T PRK09528 6 YLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISD---KLGLKKHLLWI 82 (420)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCchHHHHHH
Confidence 5678999999999999998887666555555554 336678999999999999999999999986 56666655443
No 152
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=96.68 E-value=0.17 Score=49.23 Aligned_cols=131 Identities=7% Similarity=0.014 Sum_probs=75.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhh---hhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHH
Q 024717 73 KRIWLLVLAQACLQFSIALFWILWAP---TLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAF 147 (263)
Q Consensus 73 ~~il~lg~~qslfEgsmy~FVf~WTP---~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~ 147 (263)
.+.+.++....+...... +.|.| .+.+ +-++.+.|++.+.+.+...+|..+.+.+.. |++.++.+....
T Consensus 35 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~d---r~G~r~~~~~~~ 108 (476)
T PLN00028 35 MRAFHLSWISFFTCFVST---FAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCD---LYGPRYGSAFLL 108 (476)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCChHHHHHHH
Confidence 345555555555444433 44555 4443 335667899999999999999999888875 456655555544
Q ss_pred HHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 148 VVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 148 ~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
++.+++........ +....+.+..+.=+..|.+.|+. ..-+++.|+++|++++++...--|+
T Consensus 109 ~~~~~~~~~~~~~~-s~~~l~~~r~l~G~~~~~~~~~~-~~i~~~~~~~~rg~a~g~~~~~~~~ 170 (476)
T PLN00028 109 MLTAPAVFCMSLVS-SATGFIAVRFFIGFSLATFVSCQ-YWMSTMFNGKIVGTANGIAAGWGNL 170 (476)
T ss_pred HHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhhHHHH-HHHHHhcChhheeHHHHHHHHHHHH
Confidence 44443332221111 11111122222222234455544 4557899999999999998755454
No 153
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.58 E-value=0.14 Score=49.63 Aligned_cols=138 Identities=21% Similarity=0.207 Sum_probs=88.4
Q ss_pred CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHh----H
Q 024717 104 GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACV----G 179 (263)
Q Consensus 104 ~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~v----G 179 (263)
-++..-|+.-+.|=...++|+.+...+.++ +.-++.|...+.+-.++-.+.+..+ .++.+++-.++. |
T Consensus 45 vs~~~aG~lis~yAl~~ai~ap~l~~lt~r---~~Rr~lLl~~l~lFi~~n~l~alAp-----~f~~Ll~aR~~~g~a~G 116 (394)
T COG2814 45 VSEGAAGQLITAYALGVALGAPLLALLTGR---LERRRLLLGLLALFIVSNLLSALAP-----SFAVLLLARALAGLAHG 116 (394)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcc---cchHHHHHHHHHHHHHHHHHHHHhc-----cHHHHHHHHHHHHHHHH
Confidence 367778999999999999999999998863 4444555443333322222222111 255666666655 9
Q ss_pred hHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHHHHhhhhcccc-c-hhHHHHHHHHHHHHHHHHHHHH
Q 024717 180 LILPSLARLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRNI-E-NAAMVAFAALGLFIAAGCMHVL 249 (263)
Q Consensus 180 ~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l~~g~~~~~~-~-~~~~~~~~~~~l~l~~~~~~~~ 249 (263)
.+|+....+..+.+|+|+|+.+++.--.=+-+..++..=.|.+-.+. + +.+-...+.++++......+.+
T Consensus 117 ~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~l 188 (394)
T COG2814 117 VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLL 188 (394)
T ss_pred HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999986666666555554445444332 2 3444444444444444434444
No 154
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=96.57 E-value=0.22 Score=48.86 Aligned_cols=182 Identities=15% Similarity=0.188 Sum_probs=112.5
Q ss_pred HHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC---Cc---------c--h--hh------H-HHHHHHhcCh
Q 024717 17 NWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM---AF---------D--D--YR------T-SFFTYIFGDK 73 (263)
Q Consensus 17 ~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~---~~---------~--~--~~------~-~~~~~i~~d~ 73 (263)
.++++. .+|++-|....++.++-+++.++.-++++.+ +. . + .. + ...+.|++||
T Consensus 176 a~~~~~---~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk 252 (448)
T COG2271 176 AFFAFH---GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNK 252 (448)
T ss_pred HHHHhc---cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcCh
Confidence 444443 5899999998877777777766655554421 10 0 0 00 1 2467799999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCC--CCCCchhHHHHHHH
Q 024717 74 RIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGP--SSFRTEDCLLYAFV 148 (263)
Q Consensus 74 ~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~--~~~~~~~~l~~~~~ 148 (263)
.++.+++...+-=-+= .=+--|.|++.. +-+...-++.++-|=++-..|+.+.+++..+- .+..+-.++..+.+
T Consensus 253 ~iW~la~a~vfvYivR-~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 253 LIWLLALANVFVYVVR-YGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred HHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 9999998765433222 235579999976 23556678999999999999999999986421 01122222222222
Q ss_pred HHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHH--HHHHHhcCCCchhHHHHHHh
Q 024717 149 VLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSL--ARLRTMYVPNELRGGMISLS 205 (263)
Q Consensus 149 ~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m--~~Lr~~~Vp~e~Ratvm~~f 205 (263)
..+++......+. ...+..-|+|=+..=+|=|-| +....+.+|.+.-+|+.|+-
T Consensus 332 ~~~~~~~w~~~~~---~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~ 387 (448)
T COG2271 332 TASLVLYWLAPNG---SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFV 387 (448)
T ss_pred HHHHHHHHcCCCc---cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchh
Confidence 2222222221111 123455666666666777865 56788999999999998873
No 155
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.54 E-value=0.13 Score=51.34 Aligned_cols=134 Identities=15% Similarity=0.113 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH---H
Q 024717 76 WLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG---F 152 (263)
Q Consensus 76 l~lg~~qslfEgsmy~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a---~ 152 (263)
+.++-.-+-+=..||.....|. .+...++..-.|++.++-+++.++-|.+.+.+.. ++..++.|...-.+.+ .
T Consensus 15 lw~a~~iS~lG~~~~~va~~wl-v~~lt~S~~~valv~~a~~LP~~Llsl~aG~laD---r~drrrili~~~~~~~~~~~ 90 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWL-VTQLTGSPLMVALVQAASTLPILLLSLFAGALAD---RFDRRRILILSQLLRALVAL 90 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---cccchHHHHHHHHHHHHHHH
Confidence 3344444445556777777787 3333567788999999999999999999998875 4555566655444333 2
Q ss_pred HHHHhhccc-hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 153 VFSIIAYDY-QEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 153 ~l~~~~~~~-~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
.+.+..... .+....+..-++...+-.++.|+...+--+.||+|+-..+.++..+=-|+.-
T Consensus 91 ~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar 152 (524)
T PF05977_consen 91 LLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIAR 152 (524)
T ss_pred HHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHH
Confidence 222222222 1212223333445555688999999999999999999999999999999863
No 156
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=96.53 E-value=0.28 Score=46.81 Aligned_cols=112 Identities=8% Similarity=0.118 Sum_probs=79.3
Q ss_pred hhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHH--hhccchhhHHHHHHHHH
Q 024717 98 PTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI--IAYDYQEIGILVALFCL 173 (263)
Q Consensus 98 P~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~--~~~~~~~~~~~~~~Fc~ 173 (263)
|.+++ +-++...|++.+.+.+..++++...+++.+ |++.++.+....++.++.... +....++....+...++
T Consensus 27 ~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~---r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l 103 (410)
T TIGR00885 27 PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMK---KLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFI 103 (410)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 55544 345667899999999999999999999885 677777777766665543332 22111121223344445
Q ss_pred HHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 174 FHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 174 fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.=...|+..+.....-.+..|+|+|++.+|+.+.=.|+-
T Consensus 104 ~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG 142 (410)
T TIGR00885 104 LTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFG 142 (410)
T ss_pred HHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHH
Confidence 555679999998889889999999999999988766653
No 157
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=96.43 E-value=0.54 Score=45.73 Aligned_cols=32 Identities=16% Similarity=0.084 Sum_probs=24.2
Q ss_pred HhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 181 ILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 181 y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
..|.....-+++.|.+.|++.+++...=-++.
T Consensus 409 ~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~ 440 (502)
T TIGR00887 409 PNATTFIVPGEVFPTRYRSTAHGISAASGKAG 440 (502)
T ss_pred CCchhhhhhhccCchhHHHHHHHHHHHHhhhH
Confidence 34555555689999999999999877655554
No 158
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=96.36 E-value=0.38 Score=45.75 Aligned_cols=129 Identities=8% Similarity=-0.009 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHhhhhhhcc-----CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh
Q 024717 83 ACLQFSIALFWILWAPTLVA-----DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII 157 (263)
Q Consensus 83 slfEgsmy~FVf~WTP~L~~-----~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~ 157 (263)
.++....++-.-+-.|.+-. +.+...-++..+.|++..++|..+.+.+.. |++.++.+.....+.+++....
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d---r~Grr~~l~~~~~~~~~~~~~~ 98 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSD---RIGRRPVLITGALIFTLACAAT 98 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHH---HcCchHHHHHHHHHHHHHHHHH
Confidence 44444444444555665532 334556789999999999999999888875 5666666666555554333332
Q ss_pred hccchhhHHHHHHHHHHHHH-hHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHH
Q 024717 158 AYDYQEIGILVALFCLFHAC-VGLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 158 ~~~~~~~~~~~~~Fc~fE~~-vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~ 216 (263)
...+ +.. .+...-+++.+ .|...|.....-.+..|+++|+++++++..=.++.-++.
T Consensus 99 ~~a~-~~~-~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 156 (413)
T PRK15403 99 LFTT-SMT-QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIG 156 (413)
T ss_pred HHcC-CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 211 12222233332 244445555566678899999999998877766654333
No 159
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=96.32 E-value=0.14 Score=49.77 Aligned_cols=133 Identities=18% Similarity=0.108 Sum_probs=80.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhccC--CCCCc-hHH-----HHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHH
Q 024717 73 KRIWLLVLAQACLQFSIALFWILWAPTLVAD--GREVH-LGL-----IFPSLLGARMLGSTVFPWLISGPSSFRTEDCLL 144 (263)
Q Consensus 73 ~~il~lg~~qslfEgsmy~FVf~WTP~L~~~--~~~~p-lGl-----IFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~ 144 (263)
+|+..+..+...+|+-=+.-.-.-.|.+.+. .+.-| ..+ +|+.+++...+|+.+++.+.. |++.++.+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~D---r~Grr~~l~ 91 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGD---KYGRQKILA 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcccHHHHH
Confidence 4566666666666653222222335666441 11112 222 378899999999999999885 577777776
Q ss_pred HHHHHHHHHHHHh-hccch-hhHH----HHHHHHHHH-HHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHH
Q 024717 145 YAFVVLGFVFSII-AYDYQ-EIGI----LVALFCLFH-ACVGLILPSLARLRTMYVPNELRGGMISLSLAP 208 (263)
Q Consensus 145 ~~~~~~a~~l~~~-~~~~~-~~~~----~~~~Fc~fE-~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~P 208 (263)
...++.+++.... ..++- .++. .+..+=+++ .+.|..+|....+-.++.|+++|+.++++...=
T Consensus 92 ~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~ 162 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFG 162 (490)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 6665555333322 22221 1110 122222333 344889999999999999999999999987753
No 160
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.32 E-value=0.082 Score=52.13 Aligned_cols=125 Identities=11% Similarity=0.137 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHhhhhhhcc--C----CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHH
Q 024717 82 QACLQFSIALFWILWAPTLVA--D----GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS 155 (263)
Q Consensus 82 qslfEgsmy~FVf~WTP~L~~--~----~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~ 155 (263)
+.+.+..-|.-+++|.|.... + -++.++|++.+.+.+...++-..++.+.. |+++++.+....++.++...
T Consensus 39 s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~D---r~G~R~v~~~~~ll~~i~~~ 115 (462)
T PRK15034 39 SVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVP---IFGGRRWTVFSTAILIIPCV 115 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHHHH
Confidence 556688889999999997654 1 24567999999999999999888888875 67887776665555443322
Q ss_pred Hhhcc----chhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHH
Q 024717 156 IIAYD----YQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPAN 210 (263)
Q Consensus 156 ~~~~~----~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN 210 (263)
..... .++ ...+...-++-...|..||+....-++..|+|+|+++++++..=-|
T Consensus 116 ~~~~a~~~~~~s-~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~ 173 (462)
T PRK15034 116 WLGIAVQNPNTP-FGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGN 173 (462)
T ss_pred HHHHHHcccCCC-HHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHh
Confidence 22111 011 1122222333333488999999999999999999999999864333
No 161
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.20 E-value=1.2 Score=44.00 Aligned_cols=154 Identities=13% Similarity=0.051 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchHHHH
Q 024717 34 ASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIF 113 (263)
Q Consensus 34 ~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~~~~~plGlIF 113 (263)
+-+++.++..++..+. .||..+++ ...++...++|||+.+.++++-.+-=++.-.| -.|+|.+.++.-+ +.+.+.
T Consensus 216 ~~~~~~iv~~i~~~~~-~~~~~~~~--~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~-s~~lp~~~~~~~~-~~~~l~ 290 (462)
T PRK15034 216 IWVPLLAIATIAAWSG-MNDIASSR--ASIADQLPVLQRLHLWLLSLLYLATFGSFIGF-SAGFAMLAKTQFP-DVNILR 290 (462)
T ss_pred HHHHHHHHHHHHHHHh-CCCccccc--cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC-hHHHHH
Confidence 3344444555555543 44432222 12345667999999999999876544442222 4489988664211 122222
Q ss_pred HHH--HHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHH--hhccc---hhhHHHHHHHHHHHHHhHhHhhHHH
Q 024717 114 PSL--LGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI--IAYDY---QEIGILVALFCLFHACVGLILPSLA 186 (263)
Q Consensus 114 s~F--M~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~--~~~~~---~~~~~~~~~Fc~fE~~vG~y~P~m~ 186 (263)
..+ .+...++.-+.+++.. |++..+.+.+.+++..++... ...+. ......+..|.+.=++.|+=.=+..
T Consensus 291 ~~~l~~l~~~l~rplgG~LAD---RiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvf 367 (462)
T PRK15034 291 LAFFGPFIGAIARSVGGAISD---KFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTF 367 (462)
T ss_pred HHHHHHHHHHHHHHhhHHHHH---hcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHH
Confidence 222 3334444445555553 567777777777655544321 12222 1222333444444455566655555
Q ss_pred HHHHhcCCC
Q 024717 187 RLRTMYVPN 195 (263)
Q Consensus 187 ~Lr~~~Vp~ 195 (263)
+|--++.|+
T Consensus 368 k~ip~~f~~ 376 (462)
T PRK15034 368 QMIAVIFRQ 376 (462)
T ss_pred HhhHHHHhh
Confidence 666566654
No 162
>PRK11462 putative transporter; Provisional
Probab=96.17 E-value=1.4 Score=42.79 Aligned_cols=127 Identities=9% Similarity=0.034 Sum_probs=66.9
Q ss_pred HHHHHHHhcChhHHHHHHHHHHHHHHHHH----HHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCC
Q 024717 63 TSFFTYIFGDKRIWLLVLAQACLQFSIAL----FWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFR 138 (263)
Q Consensus 63 ~~~~~~i~~d~~il~lg~~qslfEgsmy~----FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~ 138 (263)
++.++.+.+||..+.+.....+......+ ..|..+-.+ + ++...+.+...++++.++|+.+.+.+.. |++
T Consensus 218 ~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~--g-~~~~~~~~l~~~~i~~iig~~l~~~l~~---r~g 291 (460)
T PRK11462 218 REDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWIL--G-TPEVFVAFLTTYCVGNLIGSALAKPLTD---WKC 291 (460)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhc--C-ChHHHHHHHHHHHHHHHHHHHHHHHHHH---HhC
Confidence 45678889998887765443333332221 122223223 2 2223456778888999999888888775 444
Q ss_pred chhHHHHHHHHHH-HHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCC
Q 024717 139 TEDCLLYAFVVLG-FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPN 195 (263)
Q Consensus 139 ~~~~l~~~~~~~a-~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~ 195 (263)
.++.+....++.+ ..+.....+.......+...++.-+..|...|.+..+-.+.+|.
T Consensus 292 kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~ 349 (460)
T PRK11462 292 KVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDY 349 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 4444433222222 12222122221111223334445555577778777787777774
No 163
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.16 E-value=0.66 Score=43.41 Aligned_cols=136 Identities=12% Similarity=0.003 Sum_probs=72.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhH-HHHHHH
Q 024717 72 DKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDC-LLYAFV 148 (263)
Q Consensus 72 d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~-l~~~~~ 148 (263)
|++...+=+...+.......+.-...+.+.+ +.++...|++.+++.....+.+.+...... |.+.++. +....+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~d---r~g~r~~~~~~~~~ 90 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSD---KRGDRKSLIVFCCL 90 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---cccchhHHHHHHHH
Confidence 3444444444555555555555555555544 446677899988877766666666655543 4455443 333333
Q ss_pred HHHH-HHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhH--HHHHHhHHHHHHH
Q 024717 149 VLGF-VFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRG--GMISLSLAPANAA 212 (263)
Q Consensus 149 ~~a~-~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ra--tvm~~fr~PlN~~ 212 (263)
..++ ++.....+ +....+....+.....+...|....+-.++.|++.|. ...++.|.=-|+-
T Consensus 91 ~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 155 (393)
T PRK15011 91 LGVLACTLFAWNR--NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLA 155 (393)
T ss_pred HHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHH
Confidence 3322 22222111 1111112223334444677888888888877776664 2346777666654
No 164
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.13 E-value=0.14 Score=52.18 Aligned_cols=168 Identities=17% Similarity=0.169 Sum_probs=90.7
Q ss_pred CccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHH-Hhhhhhhcc--C
Q 024717 27 GVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALFW-ILWAPTLVA--D 103 (263)
Q Consensus 27 g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qslfEgsmy~FV-f~WTP~L~~--~ 103 (263)
.|..|=.++-.......+.++..| |.|+.++..... ...++|+|.+...++-+..++.+|.-+ .+|+..... +
T Consensus 267 ~W~Sa~VIa~lviG~~~Lv~F~~w-E~~~~~~~Pl~P---~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~ 342 (599)
T PF06609_consen 267 PWKSAHVIAPLVIGFVLLVAFVVW-EWFGAPKDPLFP---HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFG 342 (599)
T ss_pred CCCCccchhhHHHHHHHHHHHHHh-hhhccCCCCcCC---HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 455555555555545555555556 555443222221 356788888888777777788777554 567666543 2
Q ss_pred CCC---CchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHH--HHHHHHH--HHHHHhhccchhhHHHHHHH-HHHH
Q 024717 104 GRE---VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLL--YAFVVLG--FVFSIIAYDYQEIGILVALF-CLFH 175 (263)
Q Consensus 104 ~~~---~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~--~~~~~~a--~~l~~~~~~~~~~~~~~~~F-c~fE 175 (263)
.+. ..-|++-..+-...++|+.+...+... .|..|... ......+ .+++....++.. ..++| ++-+
T Consensus 343 ~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~---ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~---~~i~~~~l~g 416 (599)
T PF06609_consen 343 SDPISITEIGWISSPVGFGSCAGAVILGLLFSK---IRHIKWQLIFGSVLMTAFCGAMAAVRPDNKN---AAIAFLVLAG 416 (599)
T ss_pred CCCcccceeehhhhhHHHHHHHHHHHHHHHHHH---ccchhHHHHHHHHHHHHHHHHHHHccCCCcc---hHHHHHHHHH
Confidence 221 135666555666677777777776652 23333322 1212222 222221122221 22333 3445
Q ss_pred HHhHhHhhHHHHHHHhcCCCchhHHHHHH
Q 024717 176 ACVGLILPSLARLRTMYVPNELRGGMISL 204 (263)
Q Consensus 176 ~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~ 204 (263)
+++|..-......-.-.+|+|.-+++.++
T Consensus 417 ~giG~~~~~~~~~~ql~~p~~~ig~a~gL 445 (599)
T PF06609_consen 417 FGIGGILVPAIVIAQLIVPDEDIGTATGL 445 (599)
T ss_pred HhHHHHHHHHHHeeEeeeCchHHHHHHHH
Confidence 55655554445566668899999999886
No 165
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.13 E-value=0.11 Score=51.86 Aligned_cols=99 Identities=14% Similarity=0.051 Sum_probs=77.5
Q ss_pred CCCc-hHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHh----H
Q 024717 105 REVH-LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACV----G 179 (263)
Q Consensus 105 ~~~p-lGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~v----G 179 (263)
++.+ .|.|++.|..+-++.-...+.+.. ++++++.+....+.-+++....... ..+..+.+.|+.. |
T Consensus 59 T~~qv~G~I~s~F~ysYal~qIp~GlLaD---rlG~K~vL~l~~l~Wsl~t~L~~fa-----~Sl~~L~i~R~llGvaEA 130 (511)
T TIGR00806 59 TEETVTNEIIPVLPYSHLAVLVPVFLLTD---YLRYKPVLVLQALSFVCVWLLLLLG-----TSVWHMQLMEVFYSVTMA 130 (511)
T ss_pred CHHHhcchHHHHHHHHHHHHHHHHHHHHH---HhCchHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Confidence 4556 999999999999999998888875 6888887776665555333322211 1377888888887 5
Q ss_pred hHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 180 LILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 180 ~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
..+ +..+.-.+.+|+++|+++.+++|.=.|+-
T Consensus 131 ~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG 162 (511)
T TIGR00806 131 ARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLG 162 (511)
T ss_pred HHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 677 89999999999999999999999988774
No 166
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.11 E-value=0.12 Score=52.58 Aligned_cols=86 Identities=10% Similarity=0.150 Sum_probs=58.1
Q ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHH-HHHHhHhhhhhhhcCCCCCCchh
Q 024717 66 FTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLG-ARMLGSTVFPWLISGPSSFRTED 141 (263)
Q Consensus 66 ~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~-~~mlGS~~f~~l~~~~~~~~~~~ 141 (263)
++.+++||..+...+...+..+..+.+.. |.|.+.+ +-+...-|+++....+ ..++|+.+.+++..+ -+.+.+.
T Consensus 323 ~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~-~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r-~~~~~~~ 400 (633)
T TIGR00805 323 IKRLLCNPIYMLVILAQVIDSLAFNGYIT-FLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKK-FKLNVKK 400 (633)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeee-ecccHHH
Confidence 56689999988888877777777766554 7887765 3344556777777666 457888888877753 2344556
Q ss_pred HHHHHHHHHHHH
Q 024717 142 CLLYAFVVLGFV 153 (263)
Q Consensus 142 ~l~~~~~~~a~~ 153 (263)
.+..++.+..++
T Consensus 401 ~~~~~~~~~~~~ 412 (633)
T TIGR00805 401 AAYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHHH
Confidence 666666555444
No 167
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=96.05 E-value=0.23 Score=47.85 Aligned_cols=104 Identities=10% Similarity=0.076 Sum_probs=63.8
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHH-HHhHhH
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFH-ACVGLI 181 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE-~~vG~y 181 (263)
+.++.+.|++++.+....++++.+.+.+.. |++.++.+.....+.+.......... +....+...-+++ ++.|..
T Consensus 50 g~s~~~~~~~~s~~~~~~~~~~~~~G~l~d---r~g~r~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~G~~~~~~ 125 (455)
T TIGR00892 50 QATYSETAWISSIMLAVLYAGGPISSILVN---RFGCRPVVIAGGLLASLGMILASFSS-NVIELYLTAGFITGLGLAFN 125 (455)
T ss_pred CcchhHHHHHHHHHHHHHHHhhHHHHHHHH---HcCchHHHHhhHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHhcchhh
Confidence 456778999999999999999999888875 45555555554444433222221111 1111122222333 344666
Q ss_pred hhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 182 LPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 182 ~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
+|....+-.++.| ++|+++++++..=-++
T Consensus 126 ~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~ 154 (455)
T TIGR00892 126 FQPSLTMLGKYFY-RRRPLANGLAMAGSPV 154 (455)
T ss_pred hhHHHHHHHHHHH-hhHHHHHHHHHhcccH
Confidence 6666667677876 7899999998865444
No 168
>PRK15075 citrate-proton symporter; Provisional
Probab=95.98 E-value=0.49 Score=45.00 Aligned_cols=117 Identities=15% Similarity=0.088 Sum_probs=66.4
Q ss_pred HHhhhhhhcc--CCCCCchHHHH---HHHHHH---HHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHH-HHhhccchh
Q 024717 93 WILWAPTLVA--DGREVHLGLIF---PSLLGA---RMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVF-SIIAYDYQE 163 (263)
Q Consensus 93 Vf~WTP~L~~--~~~~~plGlIF---s~FM~~---~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l-~~~~~~~~~ 163 (263)
+-.=.|.+.+ +.++.+.+... ..|+.. ..+|+.+.+.+.. |++.++.+.....+.+.+. .....++-.
T Consensus 34 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~D---r~Grr~~l~~~~~~~~~~~~l~~~~~~~~ 110 (434)
T PRK15075 34 FGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYID---RVGRRKGLIVTLSIMASGTLLIAFVPGYA 110 (434)
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhh---hhchHHHHHHHHHHHHHHHHHHHhCCcHH
Confidence 3334556655 34555555443 233332 2467888888775 5666666655554444222 222222211
Q ss_pred -hH-HHHHHHHHHHHHh----HhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 164 -IG-ILVALFCLFHACV----GLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 164 -~~-~~~~~Fc~fE~~v----G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.. .....+++.-+.. |..+|.....-.++.|+|+|+++++++..--|+.
T Consensus 111 ~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g 165 (434)
T PRK15075 111 TIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVA 165 (434)
T ss_pred HHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHH
Confidence 00 0011233333333 6679988899999999999999999988776654
No 169
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=95.71 E-value=2.4 Score=42.06 Aligned_cols=189 Identities=15% Similarity=0.174 Sum_probs=106.8
Q ss_pred HHHHHHHHHH---HHHHhcccccCCCCC--cch-h---hHHHHHHHhcChhHHHHHHHHHHHHHHHH----HHHHhhhhh
Q 024717 33 TASVFLSILG---IICVSRGWTENPKMA--FDD-Y---RTSFFTYIFGDKRIWLLVLAQACLQFSIA----LFWILWAPT 99 (263)
Q Consensus 33 ~~a~~~l~i~---~ili~~~w~ENyg~~--~~~-~---~~~~~~~i~~d~~il~lg~~qslfEgsmy----~FVf~WTP~ 99 (263)
..+.++.+++ .+...+.-+|.+-++ .++ . .++.+..+++||..+++.....++-...- ++++.-+=.
T Consensus 187 ~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~ 266 (467)
T COG2211 187 GTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV 266 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE
Confidence 3344444443 333444555766432 221 1 12345678888888887775444433221 233344444
Q ss_pred hccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhh-ccchhhHHHHHHHHHHHHHh
Q 024717 100 LVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA-YDYQEIGILVALFCLFHACV 178 (263)
Q Consensus 100 L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~-~~~~~~~~~~~~Fc~fE~~v 178 (263)
+ +..|..-++.+...-+...++..+.+.+.. ++++++...+..++.+++-.... .+.+.....+..-|+.....
T Consensus 267 l--g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~---~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~ 341 (467)
T COG2211 267 L--GDPELFAYLLLLASGAGLLIGLILWPRLVK---KFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGT 341 (467)
T ss_pred c--CChHHHHHHHHHHHHHHHHHHHHhHHHHHH---HhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHh
Confidence 4 445555555555665666666888888875 67777776666555553333222 23322233344458888888
Q ss_pred HhHhhHHHHHHHhcCCCch------h----HHHHHHhHHHHHHH----HHHHHHhhhhcccc
Q 024717 179 GLILPSLARLRTMYVPNEL------R----GGMISLSLAPANAA----ILLFLLLRGFYRNI 226 (263)
Q Consensus 179 G~y~P~m~~Lr~~~Vp~e~------R----atvm~~fr~PlN~~----v~~~l~~g~~~~~~ 226 (263)
|+..|.+-.|-.+.+|.+. | -+.|+++|==-..+ +-..|-..+|..|+
T Consensus 342 ~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~ 403 (467)
T COG2211 342 GIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYVPNV 403 (467)
T ss_pred hccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 9999999999988888542 2 24566666433332 23334445888888
No 170
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=95.54 E-value=0.46 Score=46.21 Aligned_cols=101 Identities=13% Similarity=0.136 Sum_probs=68.5
Q ss_pred chHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhh-ccchh----hHHHHHHHHHHHHHhHhHh
Q 024717 108 HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA-YDYQE----IGILVALFCLFHACVGLIL 182 (263)
Q Consensus 108 plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~-~~~~~----~~~~~~~Fc~fE~~vG~y~ 182 (263)
..|++.+.+.+..++|+.+.+++.. |++.++.+....++..++..... .++.. ....+..-.+.=+++|..+
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d---~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~ 133 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLAD---KLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDY 133 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 5689999999999999999999875 56666666554443332222111 11111 1112223333334569999
Q ss_pred hHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 183 PSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 183 P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
|.....-++..|.+.|++++++++.=.++
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~ 162 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGF 162 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHH
Confidence 99999999999999999999998766555
No 171
>PTZ00207 hypothetical protein; Provisional
Probab=95.54 E-value=0.93 Score=46.17 Aligned_cols=132 Identities=11% Similarity=0.040 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH
Q 024717 75 IWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF 152 (263)
Q Consensus 75 il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~ 152 (263)
++..+..-...-+..|.|-. ..|.+.+ +-++.++|++++... ...++...++.+.. +++++..+.++.+..++
T Consensus 29 ~lva~~~~~~~~g~~y~fsv-~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~D---r~G~R~vllig~ll~~i 103 (591)
T PTZ00207 29 LLVLGAFCSICTSFMYAFNL-ISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYD---YLGPRPIFVLSMTVFCL 103 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHH
Confidence 44455555566688888874 4555544 445667888876533 33444555666664 56777776665544442
Q ss_pred HHHHhhcc-chhhHHHHHHHHHHHHH----hHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 153 VFSIIAYD-YQEIGILVALFCLFHAC----VGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 153 ~l~~~~~~-~~~~~~~~~~Fc~fE~~----vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
........ ...+...++.+|++-+. .|.++|.....-.++.| ++|++++++...=.++-
T Consensus 104 G~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLG 167 (591)
T PTZ00207 104 GTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLG 167 (591)
T ss_pred HHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHH
Confidence 22222111 00001124445544433 35566766666677887 68999999999877764
No 172
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=95.43 E-value=0.81 Score=42.66 Aligned_cols=104 Identities=19% Similarity=0.101 Sum_probs=61.0
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHH-HHHHHHHH-HHHHHhhccchhhHHHHHHHHHHHHHhHh
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCL-LYAFVVLG-FVFSIIAYDYQEIGILVALFCLFHACVGL 180 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l-~~~~~~~a-~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~ 180 (263)
+-++.+.|++.+.+++..++++.+.+.+..+ .+..... .......+ ..+.... ..++....+....++-...+.
T Consensus 35 g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~---~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~l~~~~~l~~~~~~~ 110 (382)
T TIGR00902 35 GLGEEMIGLLIGAALIARFAGGLFFAPLIKD---ANHIIIALRLLALASAIFAAAFSA-GAHNAWLLFIAIGLFALFFSA 110 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHcc
Confidence 4577889999999999999999988887753 2221111 11111111 1111111 111211222222233334455
Q ss_pred HhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 181 ILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 181 y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
..|....+-.++ +|+|+..++..|.=-++-
T Consensus 111 ~~p~~~al~~~~--~~~~~~~~g~~~~~~slG 140 (382)
T TIGR00902 111 GMPIGDALANTW--QKQFGLDYGKVRLIGSAA 140 (382)
T ss_pred chhHHHHHHHHH--HHHcCCCccHHHHHHHHH
Confidence 688888887654 577899999999888874
No 173
>PRK09952 shikimate transporter; Provisional
Probab=95.35 E-value=0.46 Score=45.46 Aligned_cols=100 Identities=19% Similarity=0.126 Sum_probs=62.2
Q ss_pred hHHHH-----HHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHH-hhccc-hhhHH-----HHHHHHHHHH
Q 024717 109 LGLIF-----PSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI-IAYDY-QEIGI-----LVALFCLFHA 176 (263)
Q Consensus 109 lGlIF-----s~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~-~~~~~-~~~~~-----~~~~Fc~fE~ 176 (263)
.|++. +.-.+...+|+.+++.+.. |++.++.+....++.+++... ...++ ..+++ .+..-.+.=+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~g~~~~G~l~D---r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~ 137 (438)
T PRK09952 61 MGTLAAFATFGVGFLFRPLGGVVFGHFGD---RLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGF 137 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 56652 3334667899999998875 566667666655555533322 22222 11111 1122223334
Q ss_pred HhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 177 CVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 177 ~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
..|..+|.....-++..|+++|+.+++....=.++
T Consensus 138 ~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~ 172 (438)
T PRK09952 138 AVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGV 172 (438)
T ss_pred hhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 45889999999999999999999998887764443
No 174
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=95.30 E-value=3.2 Score=40.60 Aligned_cols=178 Identities=18% Similarity=0.183 Sum_probs=105.0
Q ss_pred HHHHHHHHhhhcccCC---ccchHHHHHHHHHHHHHHHhcccccCCCC-CcchhhH-HHHHHHhcChhHHHHHHHHHHHH
Q 024717 12 GQVLANWLVGIDVKKG---VVPSSTASVFLSILGIICVSRGWTENPKM-AFDDYRT-SFFTYIFGDKRIWLLVLAQACLQ 86 (263)
Q Consensus 12 aG~~a~~lv~~~~~~g---~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~~~~~~-~~~~~i~~d~~il~lg~~qslfE 86 (263)
+++++-+++... | |+.-..+-++.+++..++..+.-++++.. ++.+.++ ..++.+.+||+.+.+++.-..--
T Consensus 155 ~q~~~P~v~~~~---g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tF 231 (417)
T COG2223 155 AQLVAPLVAVAF---GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLPAQLKAVFSNKDTWLLSLLYFATF 231 (417)
T ss_pred HHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccchhHHHHHhcCcchHHHHHHHHHHH
Confidence 455666666653 4 55555566667777777777666666642 3333333 56888999999999998765544
Q ss_pred HHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccc--
Q 024717 87 FSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY-- 161 (263)
Q Consensus 87 gsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~-- 161 (263)
|+ |+-.=.|-|.+.+ +.++..-|.+-+.|-....+.=.+=+++. .|++..+.+...|.+.+++..+...+.
T Consensus 232 G~-Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~Ls---DR~Gg~rv~~~~f~~~~~~~~~l~~~~~~ 307 (417)
T COG2223 232 GG-FVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLS---DRIGGRRVTLAVFVGMALAAALLSLFLTG 307 (417)
T ss_pred HH-HHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhh---hhccchhHHHHHHHHHHHHHHHHHccccc
Confidence 44 2233347777766 33455556555555443333222222333 367888888889988887777665443
Q ss_pred ----hhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCc
Q 024717 162 ----QEIGILVALFCLFHACVGLILPSLARLRTMYVPNE 196 (263)
Q Consensus 162 ----~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e 196 (263)
.+....+..|...-.|-|+=-=+...+-.++-|+|
T Consensus 308 ~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~ 346 (417)
T COG2223 308 FGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE 346 (417)
T ss_pred cccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh
Confidence 11123445566666666555445445544555443
No 175
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=95.16 E-value=0.39 Score=43.37 Aligned_cols=97 Identities=23% Similarity=0.183 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHH-Hhhccch-hhH-HHHHHHHHHHHH----hHhHhhHH
Q 024717 113 FPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFS-IIAYDYQ-EIG-ILVALFCLFHAC----VGLILPSL 185 (263)
Q Consensus 113 Fs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~-~~~~~~~-~~~-~~~~~Fc~fE~~----vG~y~P~m 185 (263)
|+.-++...+|+.+.+.+.. |++.++.+....++.+++.. ....++. +.. ...+.+++.-++ .|..+|..
T Consensus 41 ~~~~~~~~~i~~~~~G~l~d---r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 117 (394)
T TIGR00883 41 FAAGFLARPLGAIVFGHFGD---RIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGA 117 (394)
T ss_pred HHHHHHHhhhHHHHhhhhhh---hhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhcccccccc
Confidence 33444555678888888875 56777766665555543332 2222221 110 111223333333 36678889
Q ss_pred HHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 186 ARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 186 ~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
..+-.++.|+|+|+.++++...-.++-
T Consensus 118 ~~~~~~~~~~~~r~~~~~~~~~~~~~G 144 (394)
T TIGR00883 118 ALYLAEYAPPGKRGFYGSFQQVGAPVG 144 (394)
T ss_pred HHHhhhcCCcccchHHHHHHHHHHHHH
Confidence 999999999999999999998877664
No 176
>TIGR00901 2A0125 AmpG-related permease.
Probab=95.16 E-value=1.3 Score=40.35 Aligned_cols=106 Identities=14% Similarity=0.055 Sum_probs=60.8
Q ss_pred CCCchHHHHHHHHHHHHHhHhhhhhhhcCC--CCCCchhH-HHHHHHHHHHHH-HHhhc-cchhhHHHHHHHHHHHHHhH
Q 024717 105 REVHLGLIFPSLLGARMLGSTVFPWLISGP--SSFRTEDC-LLYAFVVLGFVF-SIIAY-DYQEIGILVALFCLFHACVG 179 (263)
Q Consensus 105 ~~~plGlIFs~FM~~~mlGS~~f~~l~~~~--~~~~~~~~-l~~~~~~~a~~l-~~~~~-~~~~~~~~~~~Fc~fE~~vG 179 (263)
+..+.|++... +.+.++ ..+.+.+..+. ++++.++. +...-+..++++ ..... +..+.........+...+.+
T Consensus 21 s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~ 98 (356)
T TIGR00901 21 SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSA 98 (356)
T ss_pred CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHH
Confidence 45567777433 444444 55556555431 11233332 333333333222 21111 22222223344445667788
Q ss_pred hHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 180 LILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 180 ~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
...|....+-.++.|+|+|+.+.++...=.|+-
T Consensus 99 ~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G 131 (356)
T TIGR00901 99 TQDIALDAWRLEILSDEELGYGSTIYIVGYRAG 131 (356)
T ss_pred HHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHH
Confidence 999999999999999999999999987766653
No 177
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.94 E-value=0.39 Score=48.93 Aligned_cols=150 Identities=12% Similarity=0.068 Sum_probs=90.7
Q ss_pred HHHHHHhcChhHHHHHHH-HHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCch
Q 024717 64 SFFTYIFGDKRIWLLVLA-QACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE 140 (263)
Q Consensus 64 ~~~~~i~~d~~il~lg~~-qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~ 140 (263)
+.++...+++|.+++... ..+.++....++=.=.|.+++ +-+....|+|.++|.++..++..+.+.+..+ .+..
T Consensus 22 ~~lq~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r---~~r~ 98 (633)
T TIGR00805 22 RCLQSLFSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK---LHRP 98 (633)
T ss_pred hHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc---cCcc
Confidence 344444566777765555 444444333333333455544 4466779999999999999999998887753 3333
Q ss_pred hHHHHHHHHH---HHHHHHhhc---cc--h------------------------------------hh--HHHHHHHHHH
Q 024717 141 DCLLYAFVVL---GFVFSIIAY---DY--Q------------------------------------EI--GILVALFCLF 174 (263)
Q Consensus 141 ~~l~~~~~~~---a~~l~~~~~---~~--~------------------------------------~~--~~~~~~Fc~f 174 (263)
+++.++.++. ++.++.|-. ++ . +. ...+..|.+.
T Consensus 99 ~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (633)
T TIGR00805 99 IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVS 178 (633)
T ss_pred eEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHH
Confidence 3443333332 233333310 00 0 00 0023445566
Q ss_pred HHHh----HhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHHHHH
Q 024717 175 HACV----GLILPSLARLRTMYVPNELRGGMISLSLAPANAAILLF 216 (263)
Q Consensus 175 E~~v----G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~ 216 (263)
++.. |.++|.-...-.+++|+++|+..++++..-.++-..+.
T Consensus 179 r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG 224 (633)
T TIGR00805 179 QLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFG 224 (633)
T ss_pred HHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHH
Confidence 6665 56788888899999999999999999998877653333
No 178
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.85 E-value=2 Score=42.45 Aligned_cols=192 Identities=13% Similarity=0.111 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcch---------------hhHHHHHH---H
Q 024717 8 ALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDD---------------YRTSFFTY---I 69 (263)
Q Consensus 8 ~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~---------------~~~~~~~~---i 69 (263)
...+++.+++.+++. .|...+|.++.+..+++.+.....-+|.-.+++.+ +..+.++. .
T Consensus 160 ~~~~~p~~~~~~~~~---~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (463)
T KOG2816|consen 160 GLVIGPALGGYLVKF---LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKV 236 (463)
T ss_pred HHhHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhccc
Confidence 345667888888886 58899999999999999999999888866542221 11122222 2
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhhhhhh------cc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCch
Q 024717 70 FGDKRIWLLVLAQACLQFSIALFWILWAPTL------VA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE 140 (263)
Q Consensus 70 ~~d~~il~lg~~qslfEgsmy~FVf~WTP~L------~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~ 140 (263)
-.||+.+.+..+. ++.-.+-|-+.. .+ +=++...+..-+......-++..+.-.+.. +.++.+
T Consensus 237 ~~~r~~l~l~l~~------~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~--~~l~~~ 308 (463)
T KOG2816|consen 237 GPDRLLLLLLLVA------FLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLS--SILGEK 308 (463)
T ss_pred CCCccchHHHHHH------HHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhh
Confidence 2345544433322 111121221111 00 113334454555555555555555443333 234455
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 141 DCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 141 ~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+.+..++..-......-. ..++ ....+.=+++++..+.-.|++.+.-+++++.|.|++++++...=.+..
T Consensus 309 ~~i~lGl~~~~~~~~~~a-f~~~-~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~ 378 (463)
T KOG2816|consen 309 RLISLGLLSEFLQLLLFA-FATE-TWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLS 378 (463)
T ss_pred hHhhHHHHHHHHHHHHHH-Hhcc-chhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHh
Confidence 544444433333333222 1222 235778889999999999999999999999999999999988766664
No 179
>PRK11010 ampG muropeptide transporter; Validated
Probab=94.01 E-value=6.6 Score=38.41 Aligned_cols=137 Identities=15% Similarity=0.062 Sum_probs=70.9
Q ss_pred HhcChhHHH---HHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCC--CCCCchh
Q 024717 69 IFGDKRIWL---LVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGP--SSFRTED 141 (263)
Q Consensus 69 i~~d~~il~---lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~--~~~~~~~ 141 (263)
..++||.+. +++.|.+-.+... .-.|...+ |-+.-..|.. +.++.+. ++..+.+.+..+. ++++..+
T Consensus 8 ~~~~~~~~~~~~l~~~~gl~~~~~~----~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr 81 (491)
T PRK11010 8 IFQQPNSAILLILGFASGLPLALTS----GTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRR 81 (491)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCch
Confidence 445555544 4444555555433 33444433 2233345553 4444443 4555555555421 1223222
Q ss_pred -HHHHHHHHHHHHHHHh-h-ccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 142 -CLLYAFVVLGFVFSII-A-YDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 142 -~l~~~~~~~a~~l~~~-~-~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
++....+..+.++... . .+.++........++.-.+.+..-|....++.++.|+|+|+.++++...=.++
T Consensus 82 ~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~l 154 (491)
T PRK11010 82 GWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRL 154 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHH
Confidence 3433333333222111 1 12223222333444555566888889999999999999999999988765554
No 180
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=93.98 E-value=0.4 Score=47.04 Aligned_cols=107 Identities=18% Similarity=0.229 Sum_probs=80.2
Q ss_pred hhhhccC--CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHH
Q 024717 97 APTLVAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLF 174 (263)
Q Consensus 97 TP~L~~~--~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~f 174 (263)
+|.+.++ -+..++|++-++|-++--++=.+.+.+.. |..|+..+...+++++++...--... +++.|.++
T Consensus 52 ~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sD---r~npr~fm~~gLilsai~nil~Gfs~-----s~~~~~~l 123 (448)
T COG2271 52 MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSD---RSNPRYFMAFGLILSAIVNILFGFSP-----SLFLFAVL 123 (448)
T ss_pred cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcc---cCCCceeehHHHHHHHHHHHHHhhhh-----HHHHHHHH
Confidence 5666663 37789999999999999888777776654 45677788888888886554332222 24444444
Q ss_pred HHHh----HhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 175 HACV----GLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 175 E~~v----G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
=..+ |+=||...++=.+.-|.++|++..++--.-=|+
T Consensus 124 ~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNi 164 (448)
T COG2271 124 WVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNI 164 (448)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhc
Confidence 4444 888999999999999999999999987776676
No 181
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=93.92 E-value=5.6 Score=39.43 Aligned_cols=149 Identities=13% Similarity=0.072 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcC-CCCCCchhHHHHH-HHHH
Q 024717 74 RIWLLVLAQACLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISG-PSSFRTEDCLLYA-FVVL 150 (263)
Q Consensus 74 ~il~lg~~qslfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~-~~~~~~~~~l~~~-~~~~ 150 (263)
|++.++.+..=.|..--+-.-.=+|.+.. +-+....|+++.+--+..++..-+.+.+..+ ++|++.++..... ....
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~ 84 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHH
Confidence 34444444433343322222233444433 4455667888888888888888888877642 1245554443322 2222
Q ss_pred HHHHH-Hhhccc-----------h----hhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchh--HHHHHHhHHHHHHH
Q 024717 151 GFVFS-IIAYDY-----------Q----EIGILVALFCLFHACVGLILPSLARLRTMYVPNELR--GGMISLSLAPANAA 212 (263)
Q Consensus 151 a~~l~-~~~~~~-----------~----~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~R--atvm~~fr~PlN~~ 212 (263)
+.++. .+..+. . .+...+.++++.+++.+++.+....+-.+.+|+++| ..++++++.=.|+-
T Consensus 85 ~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG 164 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIG 164 (477)
T ss_pred HHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHH
Confidence 23322 221111 0 012345678889999999999999999999999976 46788888777775
Q ss_pred HHHHHHhhhh
Q 024717 213 ILLFLLLRGF 222 (263)
Q Consensus 213 v~~~l~~g~~ 222 (263)
-++.-..|++
T Consensus 165 ~ilg~~~g~~ 174 (477)
T TIGR01301 165 NVLGYAAGAY 174 (477)
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 182
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=93.57 E-value=0.052 Score=53.59 Aligned_cols=192 Identities=17% Similarity=0.019 Sum_probs=92.8
Q ss_pred HHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCC-CCCcc-h--h-----h---HHHHHHHhcCh--hHHHH
Q 024717 13 QVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENP-KMAFD-D--Y-----R---TSFFTYIFGDK--RIWLL 78 (263)
Q Consensus 13 G~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENy-g~~~~-~--~-----~---~~~~~~i~~d~--~il~l 78 (263)
.+++...++.. +.|++-|+.+.++.++.+++....-+|+. |.+++ + . . .+++....++| ++-.+
T Consensus 174 ~vvgs~va~~~--~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl 251 (493)
T KOG1330|consen 174 YVVGSVVASLT--FWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSL 251 (493)
T ss_pred EEeeeeeccCc--cceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehH
Confidence 34555555543 44999999999999999999998888865 43211 1 0 1 12333333433 33334
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccC-----CCCCchHHHHHH-HHHHHHHh----HhhhhhhhcCCCCCCchhHHHHHHH
Q 024717 79 VLAQACLQFSIALFWILWAPTLVAD-----GREVHLGLIFPS-LLGARMLG----STVFPWLISGPSSFRTEDCLLYAFV 148 (263)
Q Consensus 79 g~~qslfEgsmy~FVf~WTP~L~~~-----~~~~plGlIFs~-FM~~~mlG----S~~f~~l~~~~~~~~~~~~l~~~~~ 148 (263)
+.+.+-|..--|. .|.|+...- +.+-..+++|-. +-++..+| +.+..++....++.+..+.=+. ..
T Consensus 252 ~~~a~~fv~Gs~s---ww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~-~~ 327 (493)
T KOG1330|consen 252 GIIAAQFVIGSLS---WWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQL-SA 327 (493)
T ss_pred HHHHHHHhccccc---hhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHH-HH
Confidence 4444443333222 377776541 112223444322 33444444 4444444332222222222111 11
Q ss_pred HHHHHHHHhhcc--chhhHHHHHHHHHHHHHhHhHhhHHH-----HHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 149 VLGFVFSIIAYD--YQEIGILVALFCLFHACVGLILPSLA-----RLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 149 ~~a~~l~~~~~~--~~~~~~~~~~Fc~fE~~vG~y~P~m~-----~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
..+..+++|... .+. ...-.-|++.=+.+|...+... .+=.+.||+++|+++|.+.|+=-.+
T Consensus 328 ~~g~~~s~~~L~~~~~~-~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~ 396 (493)
T KOG1330|consen 328 ALGAPLSIPFLFLFPAF-TSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHI 396 (493)
T ss_pred hhhhhHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHH
Confidence 112222322211 000 0112234444444455554443 3445788999999999999954444
No 183
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=93.33 E-value=7 Score=36.55 Aligned_cols=131 Identities=14% Similarity=0.013 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCC--CCCc-hhHHHHHHHH
Q 024717 75 IWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPS--SFRT-EDCLLYAFVV 149 (263)
Q Consensus 75 il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~--~~~~-~~~l~~~~~~ 149 (263)
++.|.++|.+=.+ |...=.|.+.+ +-+..+.|++ ...+.+ .+...+.+.+..+.. ..+. ++++....++
T Consensus 4 ~~~l~~~~~~~~~----~~~~~~~~~l~~~g~~~~~ig~~-~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~ 77 (402)
T PRK11902 4 MLLLGFASGLPLA----LTSGTLQAWMTVEGLDIQTIGFF-SLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVG 77 (402)
T ss_pred HHHHHHHHhhhHH----HHHHHHHHHHHHcCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHH
Confidence 3445555544333 33333455443 3355567777 444444 455555555554210 0122 2355555555
Q ss_pred HHHHHHHhhc--cchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 150 LGFVFSIIAY--DYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 150 ~a~~l~~~~~--~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
.+.++..... +..+....+...++.-.+.....|....+..+++|+|+|+++.++...=-++
T Consensus 78 ~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~ 141 (402)
T PRK11902 78 LAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRL 141 (402)
T ss_pred HHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHH
Confidence 5444433322 2222222333333445667889999999999999999999999987764333
No 184
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=92.85 E-value=4.7 Score=38.43 Aligned_cols=123 Identities=7% Similarity=-0.026 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCC-CchhHHHHHHHHHHHHH
Q 024717 78 LVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSF-RTEDCLLYAFVVLGFVF 154 (263)
Q Consensus 78 lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~-~~~~~l~~~~~~~a~~l 154 (263)
|+++..++-.++-+.+=...|.+.+ +-++.+.|++.+.+.+..++++...+.+.. |. +.++.+.....+.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~d---r~g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIAD---KWLSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcccHHHHHHHHHHHHHHH
Confidence 4444434333333333333334433 336678999999999999999999999886 33 33455555555554333
Q ss_pred HHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHH--------hcCCCchhHHHHHH
Q 024717 155 SIIAYDYQEIGILVALFCLFHACVGLILPSLARLRT--------MYVPNELRGGMISL 204 (263)
Q Consensus 155 ~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~--------~~Vp~e~Ratvm~~ 204 (263)
......+ +....+...++.-+..+...|....+-. +..+++.|.++++.
T Consensus 84 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~ 140 (418)
T TIGR00889 84 FFAAQVT-TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT 140 (418)
T ss_pred HHHHHhc-CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh
Confidence 3222111 1111223333333333445565544421 23445567777763
No 185
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=92.57 E-value=6.1 Score=38.31 Aligned_cols=133 Identities=15% Similarity=0.145 Sum_probs=83.6
Q ss_pred HHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccC--CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHH
Q 024717 67 TYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLL 144 (263)
Q Consensus 67 ~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~--~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~ 144 (263)
.++.|||+-+.+++.--+ |+..|--++.|-|.+..| -++..-|..-+-.-...+..+.+-+.+..++++.|+.-.+.
T Consensus 202 ~~vw~~~~aW~vtLfmGl-qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~ 280 (395)
T COG2807 202 RKVWRSPLAWQVTLFMGL-QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLA 280 (395)
T ss_pred cccccCchhHHHHHHHHh-hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 568999999998876554 556677789999999763 35666777776666777777777777765333333322221
Q ss_pred HHHHHHH-HHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHh
Q 024717 145 YAFVVLG-FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLS 205 (263)
Q Consensus 145 ~~~~~~a-~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~f 205 (263)
......+ +-+. ..|.+. ..+|+ .++-..-|.-||.-..+-...-+|.+++.-.+-+
T Consensus 281 ~~~~l~G~~G~~--~~P~~~--~~lw~-~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgm 337 (395)
T COG2807 281 LLLMLVGLVGLL--LAPGQL--PILWA-LLLGLGQGGAFPLALTLILLRSSDAAIAAALSGM 337 (395)
T ss_pred HHHHHHHHHHHH--HhhhhH--HHHHH-HHHhCccchHHHHHHHHHHhhcCChHHHHHHHHH
Confidence 1111111 1111 123333 23452 4445555899999999888888888888776654
No 186
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=92.45 E-value=0.27 Score=48.71 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=71.3
Q ss_pred CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHH--HHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhH--
Q 024717 104 GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLY--AFVVLGFVFSIIAYDYQEIGILVALFCLFHACVG-- 179 (263)
Q Consensus 104 ~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~--~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG-- 179 (263)
-++-..|++-..||+.-|+.|-+++.+-.+.+| .+.+.. .+...++....- . . .+|.|.+.-..+|
T Consensus 65 i~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR---~~v~~vG~~iW~~Av~~~~f--s-~----~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 65 ISDSELGLLQTVFIVVFMIASPLFGYLADRYNR---KRVIAVGIFIWTLAVFASGF--S-N----HFWQVLLCRGFVGIG 134 (493)
T ss_pred CCchhccchhHHHHHHHHHHHHHHHHHHhhcCc---ceEEeeHHHHHHHHHHHHHH--H-H----HHHHHHHHHHHhccc
Confidence 456778999999999999999999998764332 223322 222222222111 1 1 3889999999996
Q ss_pred --hHhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 180 --LILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 180 --~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
.|-|...++-++.-||++|++++++|.---|+
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv 168 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV 168 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhccc
Confidence 59999999999999999999999998765554
No 187
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=92.13 E-value=5.8 Score=36.84 Aligned_cols=105 Identities=18% Similarity=0.126 Sum_probs=57.3
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCc-hhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhH
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRT-EDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLI 181 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~-~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y 181 (263)
+.++...|++.+.+++...+++.+.+.+..+..|... .+.+..... ...+......+ +....+..-.+.-...|.+
T Consensus 35 g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~l~i~~~l~g~~~~~~ 111 (382)
T PRK11128 35 GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTL--LFAVAFWFGAH-SFWLLFVAIGLFNLFFSPL 111 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHH--HHHHHHHHhcc-cHHHHHHHHHHHHHHHccc
Confidence 4567889999999999999999998887753222111 122221111 11111111111 2111122222233445789
Q ss_pred hhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 182 LPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 182 ~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.|....+-.++. ++|+..++..|.=-|+-
T Consensus 112 ~~~~~a~~~~~~--~~~~~a~~~~~~~~~lg 140 (382)
T PRK11128 112 VPLTDALANTWQ--KQIGLDYGKVRLWGSIA 140 (382)
T ss_pred ccHHHHHHHHHH--hhccCCcchHHHHHHHH
Confidence 998777766663 44666666666555553
No 188
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=90.84 E-value=8.6 Score=36.97 Aligned_cols=115 Identities=12% Similarity=0.138 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh
Q 024717 79 VLAQACLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII 157 (263)
Q Consensus 79 g~~qslfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~ 157 (263)
+....++-++.=.+.-.|.+-|++ +-++.+.|++.+...++.+++..+.+.+.. +..+.++.+.+..+++++++...
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aD--r~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIAD--RFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--HhhhHHHHHHHHHHHHHHHHHHH
Confidence 333333333333444456666655 346789999999999999999998888764 23467777877777776655444
Q ss_pred hccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCc
Q 024717 158 AYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNE 196 (263)
Q Consensus 158 ~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e 196 (263)
...+ +....++...++..+-.--.|..-++-.+++.|+
T Consensus 86 ~~~~-~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~ 123 (400)
T PF03825_consen 86 AFSS-SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDR 123 (400)
T ss_pred HHhc-cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccc
Confidence 3222 2233455555565555566777778888888753
No 189
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.81 E-value=2.9 Score=41.05 Aligned_cols=111 Identities=17% Similarity=0.079 Sum_probs=73.5
Q ss_pred HHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCC-CcchhhHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 024717 14 VLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKM-AFDDYRTSFFTYIFGDKRIWLLVLAQACLQFSIALF 92 (263)
Q Consensus 14 ~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~-~~~~~~~~~~~~i~~d~~il~lg~~qslfEgsmy~F 92 (263)
.+++.++|. .|..+||.+=..++++.+.+-+.. =||+-+ +..+.+...+..+++||.++.....=. +-.+ +
T Consensus 214 pfGGilYe~---~Gk~aPFlVL~~v~Lld~~L~l~v-i~p~~~~~~~~~~~~~~~~Ll~dP~I~~~agai~-~~n~---~ 285 (464)
T KOG3764|consen 214 PFGGILYEF---AGKSAPFLVLAIVLLLDGALQLLV-IEPTEMDPDSTEQGTPMWSLLMDPYILLIAGAIT-FSNS---S 285 (464)
T ss_pred CcccchHhh---cCCcCcHHHHHHHHHHHHHHHHhe-eCccccCccccccCccHHHHHhCchHhhhhcchh-hccc---h
Confidence 567888886 599999999888888877777764 444422 212223335788999999987543211 1111 1
Q ss_pred HHhhhhhhcc------CCCCCchHHHHHHHHHHHHHhHhhhhhhhc
Q 024717 93 WILWAPTLVA------DGREVHLGLIFPSLLGARMLGSTVFPWLIS 132 (263)
Q Consensus 93 Vf~WTP~L~~------~~~~~plGlIFs~FM~~~mlGS~~f~~l~~ 132 (263)
.=+=-|++.. ..++.+.|+.|----++..+|+.+|..+..
T Consensus 286 lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~ 331 (464)
T KOG3764|consen 286 LAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLAD 331 (464)
T ss_pred HHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHH
Confidence 1112344421 345778999998888999999999999986
No 190
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=90.51 E-value=5.8 Score=38.87 Aligned_cols=113 Identities=20% Similarity=0.071 Sum_probs=73.7
Q ss_pred chHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH-HHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHH
Q 024717 108 HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG-FVFSIIAYDYQEIGILVALFCLFHACVGLILPSLA 186 (263)
Q Consensus 108 plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a-~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~ 186 (263)
..+++-+++-+..++|+.+.+++.. +++-+..+..+.+.-. .++...... +......+=++.-+++|..--..-
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d---~~GRk~~l~~~~~~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~p 164 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGD---RIGRKKTLLLAVVLFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAP 164 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcch
Confidence 3489999999999999999999764 4544444433222221 222111112 212234444555566677777777
Q ss_pred HHHHhcCCCchhHHHHHHhHHHHHHHHHHHHHhhhhccc
Q 024717 187 RLRTMYVPNELRGGMISLSLAPANAAILLFLLLRGFYRN 225 (263)
Q Consensus 187 ~Lr~~~Vp~e~Ratvm~~fr~PlN~~v~~~l~~g~~~~~ 225 (263)
..-++.-|.+.|++..+.++.+.++-+.+....|...++
T Consensus 165 iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~ 203 (513)
T KOG0254|consen 165 VYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK 203 (513)
T ss_pred hhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 778888899999999999999999767666554544433
No 191
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=89.47 E-value=9.7 Score=37.88 Aligned_cols=76 Identities=16% Similarity=0.123 Sum_probs=51.0
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCc
Q 024717 64 SFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRT 139 (263)
Q Consensus 64 ~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~ 139 (263)
++....++|++..++-+...+--|..|.=-..=-+++.. +-++.--|++...--++.|+|+.+.+....+.++++.
T Consensus 257 ~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~ 333 (480)
T KOG2563|consen 257 KSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKL 333 (480)
T ss_pred HHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 456778899999888776665555444322222222222 2234668999999999999999999999875444433
No 192
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=89.07 E-value=4.3 Score=39.55 Aligned_cols=99 Identities=18% Similarity=0.149 Sum_probs=70.3
Q ss_pred CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhH---
Q 024717 105 REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLI--- 181 (263)
Q Consensus 105 ~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y--- 181 (263)
++....+.-+.||+..++|+.+++.+.. +++-+..+.....+..++-...+... .++.|+++-+..|+.
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD---~~GRk~~~~~~~~~~~i~~~~~a~a~-----~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSD---RFGRKPVLLVSLLLFIIFGILTAFAP-----NYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHh---hcccHHHHHHHHHHHHHHHHHHHHhC-----cHHHHHHHHHHHHhhccc
Confidence 4456678889999999999999998875 36666666665555553332222111 277888888888654
Q ss_pred -hhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 182 -LPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 182 -~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
+.....+-.+++++++|+.++++...+-..
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~ 218 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTLGGFFFVG 218 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHHHHHHHHH
Confidence 455667789999999999999995555444
No 193
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=88.53 E-value=18 Score=33.69 Aligned_cols=108 Identities=8% Similarity=0.055 Sum_probs=63.9
Q ss_pred CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCC-CCCc-hhHHHHHHHHHHHHHHHh-hccch--h--hHHHHHHHHHHHH
Q 024717 104 GREVHLGLIFPSLLGARMLGSTVFPWLISGPS-SFRT-EDCLLYAFVVLGFVFSII-AYDYQ--E--IGILVALFCLFHA 176 (263)
Q Consensus 104 ~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~-~~~~-~~~l~~~~~~~a~~l~~~-~~~~~--~--~~~~~~~Fc~fE~ 176 (263)
-+....|++++...+..++...+.+.+..+.+ |.+. +..+.......+++.... ..+.. . ....+...+++..
T Consensus 32 ~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (437)
T TIGR00792 32 LSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGL 111 (437)
T ss_pred CCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHH
Confidence 35566899999999999999999999876422 2222 123433333333222211 11211 1 1122334455666
Q ss_pred HhHhHhhHHHHHHHhcC-CCchhHHHHHHhHHHHHH
Q 024717 177 CVGLILPSLARLRTMYV-PNELRGGMISLSLAPANA 211 (263)
Q Consensus 177 ~vG~y~P~m~~Lr~~~V-p~e~Ratvm~~fr~PlN~ 211 (263)
+.+++.+....+-.+.. |+++|+...++-+.=.|+
T Consensus 112 ~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~ 147 (437)
T TIGR00792 112 FYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATL 147 (437)
T ss_pred HHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHH
Confidence 66777666677777766 567899988876665554
No 194
>PRK03612 spermidine synthase; Provisional
Probab=88.31 E-value=23 Score=35.47 Aligned_cols=112 Identities=13% Similarity=0.172 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH-HH
Q 024717 77 LLVLAQACLQFSIALFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV-FS 155 (263)
Q Consensus 77 ~lg~~qslfEgsmy~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~-l~ 155 (263)
..|+....+|-. ..-+-+|.+ +.+-...+++-+.||.++.+||.+.+++.. . ...+.......++.++ ++
T Consensus 25 ~sg~~~L~yEv~---~~r~l~~~~--G~s~~~~~~ii~~fl~glalGs~l~~~~~~--~--~~~~~~~~e~~i~l~~~~~ 95 (521)
T PRK03612 25 VCAACGLVYELL---LGTLASYLL--GDSVTQFSTVIGLMLFAMGVGALLSKYLLR--D--AAAGFVAVELLLALLGGLS 95 (521)
T ss_pred HHHHHHHHHHHH---HHHHHHHHh--CchHHHHHHHHHHHHHHHHHHHHHHHhhhh--h--HHHHHHHHHHHHHHHHHHH
Confidence 445555566643 222333333 555667899999999999999999887541 1 1122222222221111 11
Q ss_pred Hhh----ccc-hhhHH-HHHHHHHHHHHhHhHhhHHHHHHHhcCCCch
Q 024717 156 IIA----YDY-QEIGI-LVALFCLFHACVGLILPSLARLRTMYVPNEL 197 (263)
Q Consensus 156 ~~~----~~~-~~~~~-~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~ 197 (263)
.+. ... +.... .+....+.=++.|+-+|.+..+..+.-+++.
T Consensus 96 ~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~ 143 (521)
T PRK03612 96 ALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHL 143 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 111 011 11111 1222223446679999999999988655333
No 195
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.49 E-value=5.8 Score=39.05 Aligned_cols=95 Identities=18% Similarity=0.308 Sum_probs=60.6
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHh--
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGL-- 180 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~-- 180 (263)
+.++...|++|+++=+...+-|-+++.+.. |++-+--+.+.+.+...+..+-+..+ + ++...+--..=|+
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~---~iGy~ipm~~Gl~vmf~sTilFafg~-s----y~~l~vAR~LQgvgs 173 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLID---RIGYKIPMVAGLFVMFLSTILFAFGN-S----YPMLFVARSLQGVGS 173 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHH---HhccccHHHHHHHHHHHHHHHHHHcc-h----hHHHHHHHHHhhhhH
Confidence 457889999999999999999999998875 56665556666666655544333322 1 2222222221121
Q ss_pred --H-hhHHHHHHHhcCCCchhHHHHHHh
Q 024717 181 --I-LPSLARLRTMYVPNELRGGMISLS 205 (263)
Q Consensus 181 --y-~P~m~~Lr~~~Vp~e~Ratvm~~f 205 (263)
. --.|+-+..++=+|..|+++||.-
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGia 201 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIA 201 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHH
Confidence 1 234556666666666789999963
No 196
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=85.79 E-value=23 Score=32.17 Aligned_cols=135 Identities=17% Similarity=0.110 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHH--HHH
Q 024717 78 LVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVL--GFV 153 (263)
Q Consensus 78 lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~--a~~ 153 (263)
.+..-.+.-|+.|.|= .|.|++++ +-++.++-.+-.+--+..-+| ...+.+.. +.+|+-.+.++.+.. ++.
T Consensus 7 a~~~v~~~~Gt~Y~Fs-~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d---~~gp~~~l~iG~~~~~~GY~ 81 (250)
T PF06813_consen 7 ASIWVQLCSGTTYTFS-AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYD---RFGPWVVLLIGAVLGFVGYG 81 (250)
T ss_pred HHHHHHHhcCcccchh-hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHH---hcchHHHHHHHHHHHHHHHH
Confidence 3444456677888887 78999976 335566666666555555554 55555553 567766544433222 233
Q ss_pred HHHhhccchhhHHHHHHHHHHHHHh--HhHh--hHHHHHHHhcCCCchhHHHHHHhHH--HHHHHHHHHHH
Q 024717 154 FSIIAYDYQEIGILVALFCLFHACV--GLIL--PSLARLRTMYVPNELRGGMISLSLA--PANAAILLFLL 218 (263)
Q Consensus 154 l~~~~~~~~~~~~~~~~Fc~fE~~v--G~y~--P~m~~Lr~~~Vp~e~Ratvm~~fr~--PlN~~v~~~l~ 218 (263)
....++.+.-....+|..|++.... |.-| -+-..--.|..|+ +|+++.++-.. -|-..+....+
T Consensus 82 ~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~ 151 (250)
T PF06813_consen 82 LLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIY 151 (250)
T ss_pred HHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHH
Confidence 3333333221113466667666554 3323 2222333477785 79999998543 34444444444
No 197
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=85.76 E-value=4.2 Score=40.58 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=73.6
Q ss_pred CCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHh----HhH
Q 024717 106 EVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACV----GLI 181 (263)
Q Consensus 106 ~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~v----G~y 181 (263)
.-.+|.+-+.|+++-.+|-..++.+.. |++..+.|...-++-+ ++.+..... -.++.|++.+++. +..
T Consensus 80 ~~~l~~~~t~F~v~Yii~~~p~~~L~~---r~~ls~~l~~~~~~w~-~~~~~~~~~----~s~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 80 GNQLGVLDTVFYVGYIIGQFPSGLLGD---RFPLSKGLSVSGILWG-LFGFLTAAV----HSFPGLIALRFLLGLFESGG 151 (495)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHHHHHH---hCChHHHHHHHHHHHH-HHHHHHHHH----hhhHHHHHHHHHHHHHhccc
Confidence 456999999999999999999999886 5554444432222222 111111111 1367788888887 567
Q ss_pred hhHHHHHHHhcCCCchhHHHHHHhHHHHHHH-HHHHHHh
Q 024717 182 LPSLARLRTMYVPNELRGGMISLSLAPANAA-ILLFLLL 219 (263)
Q Consensus 182 ~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~-v~~~l~~ 219 (263)
||+....=+++-.+++|++.|+++=+=-++- +...+++
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA 190 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIA 190 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHH
Confidence 9999999999999999999999987655554 3444554
No 198
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=85.08 E-value=38 Score=32.75 Aligned_cols=195 Identities=14% Similarity=0.062 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccC----------CCCCcch-------hhHHHHHHH
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTEN----------PKMAFDD-------YRTSFFTYI 69 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~EN----------yg~~~~~-------~~~~~~~~i 69 (263)
+-.+++..+++.+.+. .++..=|.++..+..+..+......+|. ++++..+ .+.+.+...
T Consensus 135 ~G~lv~~~l~G~l~~~---~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 211 (433)
T PF03092_consen 135 VGSLVGSLLSGPLLDS---FGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRA 211 (433)
T ss_pred HHHHHHHHhhhhhhhc---CCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHH
Confidence 3455566677777775 4677778888877777766666655541 1111000 011234445
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhhhhhhccC--------C------CCCchHHHHHHHHHHHHHhHhhhhhhhcCCC
Q 024717 70 FGDKRIWLLVLAQACLQFSIALFWILWAPTLVAD--------G------REVHLGLIFPSLLGARMLGSTVFPWLISGPS 135 (263)
Q Consensus 70 ~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~~--------~------~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~ 135 (263)
++.|.++...+ +++|++.-+|...++ . ++.-+|.+-..-.++.++|..+|++..++.
T Consensus 212 ~~~~~i~~~~~--------~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~- 282 (433)
T PF03092_consen 212 LQQRAIWQPIL--------FFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNW- 282 (433)
T ss_pred HhhhHHHHHHH--------HHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 55555554333 156666666655332 0 112247777777788999999999988632
Q ss_pred CCCchhHH-HHHHHHHHH-HHHHhh-ccch--hhH----H-HHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHh
Q 024717 136 SFRTEDCL-LYAFVVLGF-VFSIIA-YDYQ--EIG----I-LVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLS 205 (263)
Q Consensus 136 ~~~~~~~l-~~~~~~~a~-~l~~~~-~~~~--~~~----~-~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~f 205 (263)
+++.+ ...-++.++ ++.-.. +... +.+ . .+.-=.+-|++-++-|=-+..+-.|+-|+..-||+++++
T Consensus 283 ---~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall 359 (433)
T PF03092_consen 283 ---SWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALL 359 (433)
T ss_pred ---CHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHH
Confidence 22322 222222221 111000 1110 000 0 011113355555776666778899999999999999999
Q ss_pred HHHHHHHHHHH
Q 024717 206 LAPANAAILLF 216 (263)
Q Consensus 206 r~PlN~~v~~~ 216 (263)
-.=.|+.-.+.
T Consensus 360 ~s~~Nlg~~~s 370 (433)
T PF03092_consen 360 ASFSNLGSSVS 370 (433)
T ss_pred HHHHHHHHHHH
Confidence 99999875444
No 199
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=84.37 E-value=0.096 Score=49.54 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=65.9
Q ss_pred CchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHH-HHHHhhccc-hhhHHHHHHHHHHHH----HhHh
Q 024717 107 VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGF-VFSIIAYDY-QEIGILVALFCLFHA----CVGL 180 (263)
Q Consensus 107 ~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~-~l~~~~~~~-~~~~~~~~~Fc~fE~----~vG~ 180 (263)
...+++.+++++...+|+.+++.+.. +++-++.+.....+..+ ++.....+. ++ .+.+++..+ ++|.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d---~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~R~~~G~~~g~ 118 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLAD---RYGRKPALIISALLMIIGSILIAFAPSYNN----FWMLLIGRFLIGFGIGG 118 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccc---cccccccccccccccccccccccccccccc----ccccccccccccccccc
Confidence 45799999999999999999998864 44444444433333221 121111121 11 334444444 4477
Q ss_pred HhhHHHHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 181 ILPSLARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 181 y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
.++.....-.|+.|+++|+...++++.-.++
T Consensus 119 ~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~ 149 (451)
T PF00083_consen 119 AYVVSPIYISEIAPPKHRGFLSSLFQLFWAL 149 (451)
T ss_pred ccccccccccccccccccccccccccccccc
Confidence 8899999999999999999999999987654
No 200
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=80.04 E-value=11 Score=37.01 Aligned_cols=120 Identities=13% Similarity=0.115 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHhhhhhhcc--C---CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHH
Q 024717 82 QACLQFSIALFWILWAPTLVA--D---GREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSI 156 (263)
Q Consensus 82 qslfEgsmy~FVf~WTP~L~~--~---~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~ 156 (263)
|.+.+-.=|--|++|.|.-.. + -++-+++++-+.=-+.-.+-=..++.+.. ++++++.-....++..+-...
T Consensus 19 S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~d---rfGgR~~~~~s~~l~~IP~~~ 95 (417)
T COG2223 19 STLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTD---RFGGRKWTILSMLLLLIPCLG 95 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhc---ccCchHHHHHHHHHHHHHHHH
Confidence 455666667788999987654 2 25678888877443333333344555553 678776544444333211111
Q ss_pred hhccchhhHHHHHHHHHHHHHh---HhHhhHHHHHHHhcCCCchhHHHHHHhH
Q 024717 157 IAYDYQEIGILVALFCLFHACV---GLILPSLARLRTMYVPNELRGGMISLSL 206 (263)
Q Consensus 157 ~~~~~~~~~~~~~~Fc~fE~~v---G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr 206 (263)
...-.+. .+.+-+++.-..+ |--|-+-+..-+++-|+|+++++++++-
T Consensus 96 ~~~a~~~--~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g 146 (417)
T COG2223 96 LAFAVTY--PSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG 146 (417)
T ss_pred HHHHccC--CchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc
Confidence 1111111 1124555555555 7789999999999999999999999976
No 201
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=79.94 E-value=21 Score=36.52 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=70.9
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHH--HHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCC--CCCCc
Q 024717 64 SFFTYIFGDKRIWLLVLAQACLQFSIA--LFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLISGP--SSFRT 139 (263)
Q Consensus 64 ~~~~~i~~d~~il~lg~~qslfEgsmy--~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~--~~~~~ 139 (263)
.+...++.|++++++-+ -+.+=|..+ +|-|+|==.-.-++.+.-+| ++.+.-.+|-+.-...+.. ++++.
T Consensus 362 a~~~~~~~s~~~llff~-~av~mG~g~~lv~tFLfWHled~~~~~~LfG-----v~~a~~~~gEI~~~ffs~klI~kiGH 435 (618)
T KOG3762|consen 362 ADVGKVFASPHILLFFF-VAVVMGAGVGLVFTFLFWHLEDLGGIKTLFG-----VVSALCHAGEILFYFFSFKLIEKIGH 435 (618)
T ss_pred HHHHHHhcCCCEEehhH-HHHHHHHHHHHHHHHHHHHHhhcCCcceeee-----ehhhhhccchHHHHHHHHHHHHHhcc
Confidence 34445677777766332 233333333 33344432221134444455 3333333333322221100 13454
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHh-HhHhhHHHHHHHhcCCCchhHHHHHHhHHH
Q 024717 140 EDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACV-GLILPSLARLRTMYVPNELRGGMISLSLAP 208 (263)
Q Consensus 140 ~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~v-G~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~P 208 (263)
.+.+-..+++-..=+.. +.+-+.++..+-+=++|..+ |..|-++..=-+...|++.|+|+-+++|.-
T Consensus 436 v~v~~lgLa~~~~Rf~~--~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~ 503 (618)
T KOG3762|consen 436 VNVMYLGLACNVGRFLY--YSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGI 503 (618)
T ss_pred cceeeehhhHHHHHHHH--HHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHH
Confidence 45554444444322221 11111133344455555544 999999999999999999999999998853
No 202
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=78.67 E-value=75 Score=31.78 Aligned_cols=104 Identities=24% Similarity=0.254 Sum_probs=63.4
Q ss_pred CchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHH--HHHHH-HHHHHhhccchhhHHHHHHHHHHHHHhHhHhh
Q 024717 107 VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYA--FVVLG-FVFSIIAYDYQEIGILVALFCLFHACVGLILP 183 (263)
Q Consensus 107 ~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~--~~~~a-~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P 183 (263)
.-.+.+-++|-+..|+||.+.+.+.. +++-++.+... +.+.+ .+.......+ .+..+.+=...+|++-|
T Consensus 60 ~lwS~~vs~f~iG~~~Gs~~~~~la~---~~GRK~~l~~~~~l~~~~~~~~~~s~~~~-----~~e~li~GR~i~Gl~~g 131 (485)
T KOG0569|consen 60 LLWSLIVSIFFIGGMIGSFSSGLLAD---RFGRKNALLLSNLLAVLAALLMGLSKSAP-----SFEMLILGRLIVGLACG 131 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---hhcchHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHhH
Confidence 33577889999999999999888875 34433444332 22222 2222221111 23334444444565555
Q ss_pred HHHHH----HHhcCCCchhHHHHHHhHHHHHHHHHHHHH
Q 024717 184 SLARL----RTMYVPNELRGGMISLSLAPANAAILLFLL 218 (263)
Q Consensus 184 ~m~~L----r~~~Vp~e~Ratvm~~fr~PlN~~v~~~l~ 218 (263)
.-... -.+.-|++.|+++-.+.++=.++-+++.-.
T Consensus 132 l~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~ 170 (485)
T KOG0569|consen 132 LSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQV 170 (485)
T ss_pred HHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHH
Confidence 54444 456779999999999999888887665533
No 203
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=78.13 E-value=72 Score=31.27 Aligned_cols=200 Identities=13% Similarity=0.035 Sum_probs=120.8
Q ss_pred HHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCC----------------------CC--Ccc------
Q 024717 10 IGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENP----------------------KM--AFD------ 59 (263)
Q Consensus 10 I~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENy----------------------g~--~~~------ 59 (263)
..|+++|+.+++.. +.....-+.++.....++.++.++.-.... .+ +..
T Consensus 143 ~~s~~lgQllvs~~-~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (412)
T PF01770_consen 143 FISSLLGQLLVSFG-GVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKS 221 (412)
T ss_pred HHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccC
Confidence 56788888888842 334455556677777777777655322110 00 000
Q ss_pred -----hhh-------HHHHHHHhcChhHHHHHHHHHHHHHHHHHHHH----hhhhhhccCCCCCchHHHHHHHHHHHHHh
Q 024717 60 -----DYR-------TSFFTYIFGDKRIWLLVLAQACLQFSIALFWI----LWAPTLVADGREVHLGLIFPSLLGARMLG 123 (263)
Q Consensus 60 -----~~~-------~~~~~~i~~d~~il~lg~~qslfEgsmy~FVf----~WTP~L~~~~~~~plGlIFs~FM~~~mlG 123 (263)
+.. .+.++...+||+++.-++--++.-+.-+..+- +|--.-.++.++..-|.+=+...+...++
T Consensus 222 ~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~ 301 (412)
T PF01770_consen 222 PSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIA 301 (412)
T ss_pred cccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHH
Confidence 000 13355667899999999855554444333333 45444222556788999999999999999
Q ss_pred HhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHH
Q 024717 124 STVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMIS 203 (263)
Q Consensus 124 S~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~ 203 (263)
+...+.+-.+..+ -.|-.+...-++.+.++.... ...++.+...++.+|-.+--+..+.....-.+.+.+|.=|-+-|
T Consensus 302 al~~g~v~~~w~~-~~~l~l~~~S~l~a~~L~lm~-~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFG 379 (412)
T PF01770_consen 302 ALLAGYVKVNWDR-WGELALGVFSLLQAGLLFLMS-FTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFG 379 (412)
T ss_pred HHHHhHhhcchHH-HHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeee
Confidence 9888877321111 112223333333344454443 33356777888888888877777877777788888887777666
Q ss_pred HhHHHHHHHHHHHH
Q 024717 204 LSLAPANAAILLFL 217 (263)
Q Consensus 204 ~fr~PlN~~v~~~l 217 (263)
+ |.|+-.+|
T Consensus 380 i-----Ntf~Al~L 388 (412)
T PF01770_consen 380 I-----NTFVALVL 388 (412)
T ss_pred e-----HHHHHHHH
Confidence 3 76665444
No 204
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=75.14 E-value=94 Score=31.06 Aligned_cols=137 Identities=13% Similarity=0.160 Sum_probs=83.9
Q ss_pred HHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHH
Q 024717 67 TYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLY 145 (263)
Q Consensus 67 ~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~ 145 (263)
..+++||..+.+.+--++....-+++.+.-.+.... +-++-.-..+.++.=++..+|=.+++.+... .+.+....-.+
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~ 370 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLL 370 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHH
Confidence 368999999998888888888877776554444433 3456666666666666666666666666542 22222222223
Q ss_pred HHHHHHHHH-HHhhccchhhHHHHHHHHH-HHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHH
Q 024717 146 AFVVLGFVF-SIIAYDYQEIGILVALFCL-FHACVGLILPSLARLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 146 ~~~~~a~~l-~~~~~~~~~~~~~~~~Fc~-fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
..++.+++. .+|.... ...++.+|+ |-.|.|.+.....-.-.++++.|+=+.++|+...
T Consensus 371 ~ll~~gl~~~~~p~~~~---~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~ 431 (509)
T KOG2504|consen 371 TLLIAGLARLFLPFATT---YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLL 431 (509)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHH
Confidence 333333333 3332111 233444444 4455577777777788899999999999998664
No 205
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=74.35 E-value=73 Score=29.42 Aligned_cols=123 Identities=11% Similarity=-0.053 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHhhhhhhcc--CCCCCchHHHH--HHHHHHHHHhHhhhhhhhcCCCCCCchhH--HHHHHHHH--HHHHH
Q 024717 84 CLQFSIALFWILWAPTLVA--DGREVHLGLIF--PSLLGARMLGSTVFPWLISGPSSFRTEDC--LLYAFVVL--GFVFS 155 (263)
Q Consensus 84 lfEgsmy~FVf~WTP~L~~--~~~~~plGlIF--s~FM~~~mlGS~~f~~l~~~~~~~~~~~~--l~~~~~~~--a~~l~ 155 (263)
+.||.-|-+++--.|.+.+ +-+....|+.. +.......+.+-+......+ |.+.++. +......+ ..++.
T Consensus 11 ~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~--~~g~r~~~i~~~~~~~~~~~~~~~ 88 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSW--RLGRRRSWVLPMQCLVSACLASLA 88 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cCCcchhHHHHHHHHHHHHHHHHH
Confidence 5567777777777777766 34566788863 45566777777776554332 2333332 22222222 12222
Q ss_pred HhhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHH
Q 024717 156 IIAYDYQEIGILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAP 208 (263)
Q Consensus 156 ~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~P 208 (263)
............+...++.-.+....-|..-.++.+..+++.|+.+.+..-.=
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g 141 (390)
T TIGR02718 89 LVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAG 141 (390)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHH
Confidence 11111111112233344444555666777777888888888887766555443
No 206
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=70.45 E-value=1.2e+02 Score=30.13 Aligned_cols=137 Identities=20% Similarity=0.197 Sum_probs=79.8
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCch
Q 024717 64 SFFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTE 140 (263)
Q Consensus 64 ~~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~ 140 (263)
+.++++.+++.+...-+...++.=.+=+ ++-.--.+.+ +-++..++++=-.--+-.++|+.+++.+.. |++.+
T Consensus 243 ~t~k~i~~~~~i~~FLiA~~~~~DGv~t-il~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~---rfg~k 318 (438)
T COG2270 243 STFKEIRGRKNLVLFLIARFFYIDGVNT-ILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDE---RFGSK 318 (438)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCc
Confidence 4477888888888766666655432211 1111122211 123455555544445566789999998764 67777
Q ss_pred hHHHHHHHHHH-HHHHHhhccchhhHHHHHHH-HHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHH
Q 024717 141 DCLLYAFVVLG-FVFSIIAYDYQEIGILVALF-CLFHACVGLILPSLARLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 141 ~~l~~~~~~~a-~~l~~~~~~~~~~~~~~~~F-c~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
..+...+++.. .|+... ....+ ..+|.. +++-...|=..-+--+.=.|.+|+|+-++-+|+|-+
T Consensus 319 ~vl~~~lvi~~~~~~~~~-~~~~~--~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyal 384 (438)
T COG2270 319 PVLMIGLVILSIAALYLI-FLEGE--LDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYAL 384 (438)
T ss_pred eeehHHHHHHHHHHHHHH-Hcccc--HHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhh
Confidence 66666555554 333322 22222 224433 344444465666666666799999999999999765
No 207
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=69.84 E-value=31 Score=34.59 Aligned_cols=118 Identities=14% Similarity=0.165 Sum_probs=74.1
Q ss_pred hcChhHHH-HHHHHHHHHHHHHHHHH-hhhhhhc--cCCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHH
Q 024717 70 FGDKRIWL-LVLAQACLQFSIALFWI-LWAPTLV--ADGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLY 145 (263)
Q Consensus 70 ~~d~~il~-lg~~qslfEgsmy~FVf-~WTP~L~--~~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~ 145 (263)
..|.|.+. .++.|.+..-.++++.. .|..... ++++..-+|++-++.=+.+++++..|+....+..+. ++=+..
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~--k~Pli~ 107 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV--KKPLIV 107 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc--ccCHHH
Confidence 34544444 44555555444544433 5777665 466778899999999999999999999987653322 222434
Q ss_pred HHHHHH-HHHHH--hhccchhhHHHHHHHHHHHHHhHhHhhHHHHHHHhc
Q 024717 146 AFVVLG-FVFSI--IAYDYQEIGILVALFCLFHACVGLILPSLARLRTMY 192 (263)
Q Consensus 146 ~~~~~a-~~l~~--~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m~~Lr~~~ 192 (263)
+++++. .++.- ..+..++ ..+..++--++.|+=.-..+.+|.-.
T Consensus 108 s~ii~~~g~llY~~l~~~~~~---~~y~mL~~R~l~Gvg~~n~a~lR~Y~ 154 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNG---VKYLMLVARILTGVGVGNFAVLRAYI 154 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccc---hHHHHHHHHHHcCcCcccHHHHHHHH
Confidence 444333 22222 2223322 35667777888999989999999754
No 208
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=68.85 E-value=31 Score=34.02 Aligned_cols=114 Identities=16% Similarity=0.140 Sum_probs=70.0
Q ss_pred HHHHHHHHHh---hhhhhccCCC-CCc--hHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhc
Q 024717 86 QFSIALFWIL---WAPTLVADGR-EVH--LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAY 159 (263)
Q Consensus 86 Egsmy~FVf~---WTP~L~~~~~-~~p--lGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~ 159 (263)
+..+|-|+.. |--....+++ +.+ =|++=++||++..+.|..-+.+.. +.+-+..+.......+++..+-..
T Consensus 41 ~~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD---~yGRkpvll~c~~~va~s~ll~~~ 117 (451)
T KOG2615|consen 41 VSSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSD---RYGRKPVLLACLIGVALSYLLWAL 117 (451)
T ss_pred ccchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhh---hhCchHHHHHHHHHHHHHHHHHHH
Confidence 5666666543 3333322111 223 499999999999999999988865 333333444444444443332221
Q ss_pred cchhhHHHHHHHHHHHHHhHhHhhHH---HHHHHhcCCCchhHHHHHHhHH
Q 024717 160 DYQEIGILVALFCLFHACVGLILPSL---ARLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 160 ~~~~~~~~~~~Fc~fE~~vG~y~P~m---~~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
.. .+.+|.+--.+-|+.-=.+ ...-++.++||.|+-.|+..-.
T Consensus 118 S~-----~F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~ 163 (451)
T KOG2615|consen 118 SR-----NFAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGT 163 (451)
T ss_pred HH-----HHHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeeh
Confidence 11 2567777677877765443 4456899999999999987544
No 209
>PRK09848 glucuronide transporter; Provisional
Probab=66.71 E-value=1.2e+02 Score=28.76 Aligned_cols=103 Identities=9% Similarity=0.060 Sum_probs=58.8
Q ss_pred CCCCchHHHHHHHHHHHHHhHhhhhhhhcCCC-CCCchh-HHHHHHH---HHHHH-HHHhhccch--hhHHHHHHHHHHH
Q 024717 104 GREVHLGLIFPSLLGARMLGSTVFPWLISGPS-SFRTED-CLLYAFV---VLGFV-FSIIAYDYQ--EIGILVALFCLFH 175 (263)
Q Consensus 104 ~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~-~~~~~~-~l~~~~~---~~a~~-l~~~~~~~~--~~~~~~~~Fc~fE 175 (263)
-+....|++++...+...+.+.+.+.+..+.+ |.+..+ ++...-+ +.... +..|....+ .....+..++++.
T Consensus 41 l~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (448)
T PRK09848 41 VGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLG 120 (448)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHH
Confidence 34566899999999999999999998876421 111111 3222211 11222 222211111 1112344567778
Q ss_pred HHhHhHhhHHHHHHHhcCCC-chhHHHHHHhH
Q 024717 176 ACVGLILPSLARLRTMYVPN-ELRGGMISLSL 206 (263)
Q Consensus 176 ~~vG~y~P~m~~Lr~~~Vp~-e~Ratvm~~fr 206 (263)
.+-+++.|....+-....+| ++|....++-+
T Consensus 121 ~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~ 152 (448)
T PRK09848 121 LCYSLVNIPYGSLATAMTQQPQSRARLGAARG 152 (448)
T ss_pred HHHHHhcccHhhhhhhhcCCHHHHHHHHHHHH
Confidence 88899998777776666655 56776544433
No 210
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=66.31 E-value=35 Score=34.21 Aligned_cols=177 Identities=15% Similarity=0.130 Sum_probs=94.0
Q ss_pred ccchHHHHHHHHHHHHHHHhcccccCCCCC-cchh-----hH---HHHHHHhcChhHHHHHHHHHHHHHHHHHH------
Q 024717 28 VVPSSTASVFLSILGIICVSRGWTENPKMA-FDDY-----RT---SFFTYIFGDKRIWLLVLAQACLQFSIALF------ 92 (263)
Q Consensus 28 ~~aPF~~a~~~l~i~~ili~~~w~ENyg~~-~~~~-----~~---~~~~~i~~d~~il~lg~~qslfEgsmy~F------ 92 (263)
+.+|=++++++.++..+++...-+|+|-+. +++. .+ +......-|.+...+.+....-.-..|..
T Consensus 207 YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~ 286 (488)
T KOG2325|consen 207 YTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSDIEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSS 286 (488)
T ss_pred cchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhccchhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 478999999999999999999999999653 2211 11 11222334555555555544443333333
Q ss_pred -----HHhhhhhhccCCCCCchHHH--HHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccchh--
Q 024717 93 -----WILWAPTLVADGREVHLGLI--FPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDYQE-- 163 (263)
Q Consensus 93 -----Vf~WTP~L~~~~~~~plGlI--Fs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~~~-- 163 (263)
.+.|+=... -..-|.+ .++...........+-++- +..+.+.+...+.+...+..+-.++...
T Consensus 287 ~~~m~~y~w~~~~a----v~~~gi~~~~~g~ls~~~~l~~~f~~l~----~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s 358 (488)
T KOG2325|consen 287 ALTMVMYGWTGSEA----VLYNGITLSISGILSVILLLLYIFTRLG----KIDKRRIILLGFLIFFLSYYIFTYPWGFYS 358 (488)
T ss_pred hHHHHHhccccchH----HHhhhhHHHHHHHHHHHHHHHHHHHHhh----hhccceeeeehHHHHHHhhheeeeeccccc
Confidence 122221110 1122222 2333333333434433332 1122233334434444444333222110
Q ss_pred ------------------------hHHHHHH-HHHHHHHhHhHhh----HHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 164 ------------------------IGILVAL-FCLFHACVGLILP----SLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 164 ------------------------~~~~~~~-Fc~fE~~vG~y~P----~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
..+-.++ .+.+-.+.|+-+| ...++-+|..-+..++++.++++++.-..
T Consensus 359 ~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~ 436 (488)
T KOG2325|consen 359 GPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIA 436 (488)
T ss_pred cccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchh
Confidence 0111222 2334555699999 46789999999999999999998876664
No 211
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=57.87 E-value=2.1e+02 Score=28.60 Aligned_cols=41 Identities=10% Similarity=-0.028 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhccc
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGW 50 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w 50 (263)
+-+.++..+++++.+. .||+..|.++++..+++.+.....|
T Consensus 149 lG~~iap~l~g~L~~~---~Gw~~~F~iaaigm~l~li~~~~~~ 189 (493)
T PRK15462 149 VGSIIAPIACGYAQEE---YSWAMGFGLAAVGMIAGLVIFLCGN 189 (493)
T ss_pred HHHHHHHHHHHHHHhh---hChHHHHHHHHHHHHHHHHHHHHhh
Confidence 4566777888888875 4899999998877777666555444
No 212
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=54.90 E-value=84 Score=23.19 Aligned_cols=105 Identities=15% Similarity=0.066 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHHHHhcChhHHHHHHHHH
Q 024717 4 FESAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFTYIFGDKRIWLLVLAQA 83 (263)
Q Consensus 4 ~ns~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~~i~~d~~il~lg~~qs 83 (263)
..++.+++++.+++++.|+. |++..+..+..+..++.+.... .+|+ . -+....++..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~---g~~~~~~~~~~~~~~~~~~~~~--~~~~-----------~-------~~~~~~~~~g 62 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRF---GRKPVLLVGLFIFVLSTAMFAL--SSNI-----------T-------VLIIARFLQG 62 (141)
T ss_pred eehhHHHHHHhhHHHHHhhc---chhHHHHHHHHHHHHHHHHHHH--hccH-----------H-------HHHHHHHHHH
Confidence 45677888999999999974 7877888777777766554432 1111 0 0112223333
Q ss_pred HHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhh
Q 024717 84 CLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLI 131 (263)
Q Consensus 84 lfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~ 131 (263)
+..+..+.....+.+...+ +.+..-.|.......+...+|..+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 63 FGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred HHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 3333333333333333322 22344566666666677777766666654
No 213
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=54.03 E-value=1.3e+02 Score=25.19 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=54.8
Q ss_pred chHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHh--hccchhhHHHHHHHHHHHHHhHhHhhHH
Q 024717 108 HLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSII--AYDYQEIGILVALFCLFHACVGLILPSL 185 (263)
Q Consensus 108 plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~--~~~~~~~~~~~~~Fc~fE~~vG~y~P~m 185 (263)
-+..++..|++++.++..+.+++ +++..|.+..+.-. +.+. .++++ ...+.+=.+.=++-++.|.+.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~l-------g~K~sm~lg~~~y~--~y~~~~~~~~~--~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKL-------GPKWSMILGSLGYA--IYIASFFYPNS--YTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHH-------hhHHHHHHHHHHHH--HHHHHHHhhhH--HHHHHHHHHHhhhhHHhhHhh
Confidence 46788888999888877765543 44434433222222 1111 12221 111111112223338999999
Q ss_pred HHHHHhcCCCchhHHHHHHhHHHHHH
Q 024717 186 ARLRTMYVPNELRGGMISLSLAPANA 211 (263)
Q Consensus 186 ~~Lr~~~Vp~e~Ratvm~~fr~PlN~ 211 (263)
+..-.++-++|.|++-.+.|=.-.+.
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~ 136 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQS 136 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHH
Confidence 99999999999999877776555543
No 214
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=52.61 E-value=2.5e+02 Score=27.91 Aligned_cols=47 Identities=19% Similarity=0.169 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 166 ILVALFCLFHACVGLILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 166 ~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
+...+-.+.-+|--..-|++..|..++.|+++|++++|.+|----++
T Consensus 354 ~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~ala 400 (451)
T KOG2615|consen 354 VLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALA 400 (451)
T ss_pred hhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHH
Confidence 35566777777778889999999999999999999999999644443
No 215
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=52.16 E-value=1.6e+02 Score=28.93 Aligned_cols=125 Identities=15% Similarity=0.150 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHhhhhhhcc-----CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhH------HHHHHHHHH
Q 024717 83 ACLQFSIALFWILWAPTLVA-----DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDC------LLYAFVVLG 151 (263)
Q Consensus 83 slfEgsmy~FVf~WTP~L~~-----~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~------l~~~~~~~a 151 (263)
++.=.-+|.+|..+-+.... +-++...|..=+.=-+.-+.|..+++.+.+ |+++.+. .+..++..+
T Consensus 264 s~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~---riGlvr~G~~~l~~q~~~L~~~ 340 (432)
T PF06963_consen 264 SFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMK---RIGLVRAGLWSLWWQWVCLALC 340 (432)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchhhHHHHHHHHHHHHHHH
Confidence 33344567777777655543 223444555555555666778888888875 4555443 222222222
Q ss_pred -HHHHHhhccchhhHHHHHHHHHHHHH--hHhH--hhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 152 -FVFSIIAYDYQEIGILVALFCLFHAC--VGLI--LPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 152 -~~l~~~~~~~~~~~~~~~~Fc~fE~~--vG~y--~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
.++..|..+... .....|..-=++ +|++ =.+..-+-.+.|||++|+++.+.=-.==|+|
T Consensus 341 v~~~~~~~~~~~~--~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf 404 (432)
T PF06963_consen 341 VVSFWAPGSPFSS--ISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLF 404 (432)
T ss_pred HHHHhcCCCCchh--hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHH
Confidence 233322222111 112112111111 1433 3455666778999999999988755555555
No 216
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=51.08 E-value=88 Score=30.81 Aligned_cols=102 Identities=15% Similarity=0.146 Sum_probs=67.3
Q ss_pred CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHH--HHHHHhhccchhhHHHHHHHHHHHHHhHh
Q 024717 103 DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLG--FVFSIIAYDYQEIGILVALFCLFHACVGL 180 (263)
Q Consensus 103 ~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a--~~l~~~~~~~~~~~~~~~~Fc~fE~~vG~ 180 (263)
+-+..+-++|..+|+.+--++|.-.+++.+ |++-++-+..++.+.+ +.+..|+....+-...+.++.+.-..+|.
T Consensus 44 ~ls~~~a~liqfaff~gYf~~~lpa~~~~k---k~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~ 120 (422)
T COG0738 44 DLTYFEASLIQFAFFGGYFIMSLPAGLLIK---KLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGL 120 (422)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccHHHHHH---HhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHH
Confidence 345567799999999999999999999886 5666665666555544 55555553332212233334444445566
Q ss_pred HhhHHHHHHHhcCCCchhHHHHHHhHH
Q 024717 181 ILPSLARLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 181 y~P~m~~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
.=-+-...-+..-|+|.-+.=||+-|.
T Consensus 121 LetaaNp~v~~lg~~~~a~~rlnl~q~ 147 (422)
T COG0738 121 LETAANPYVTLLGKPESAAFRLNLAQA 147 (422)
T ss_pred HHhccchHHHHhCCchhHHHHHHHHHH
Confidence 656666666777788877777888775
No 217
>PRK09669 putative symporter YagG; Provisional
Probab=50.35 E-value=2.3e+02 Score=26.83 Aligned_cols=106 Identities=12% Similarity=0.107 Sum_probs=57.5
Q ss_pred CCchHHHHHHHHHHHHHhHhhhhhhhcCCC-CCCc-hhHHHHHHHHHHH----HHHHhhccchh-hHHHHHHHHHHHHHh
Q 024717 106 EVHLGLIFPSLLGARMLGSTVFPWLISGPS-SFRT-EDCLLYAFVVLGF----VFSIIAYDYQE-IGILVALFCLFHACV 178 (263)
Q Consensus 106 ~~plGlIFs~FM~~~mlGS~~f~~l~~~~~-~~~~-~~~l~~~~~~~a~----~l~~~~~~~~~-~~~~~~~Fc~fE~~v 178 (263)
....|+++....+--++..-+.+.+..+.+ |.+. +.++...-...++ .+..|...... ....+...+++..+-
T Consensus 44 ~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~ 123 (444)
T PRK09669 44 AAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVY 123 (444)
T ss_pred HHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHH
Confidence 344788888888888888888888775421 2222 2234332222222 22222111111 112233444555555
Q ss_pred HhHhhHHHHHHHhcC-CCchhHHHHHHhHHHHHH
Q 024717 179 GLILPSLARLRTMYV-PNELRGGMISLSLAPANA 211 (263)
Q Consensus 179 G~y~P~m~~Lr~~~V-p~e~Ratvm~~fr~PlN~ 211 (263)
.++......+-.+.- |+++|.+..++.+.=.|+
T Consensus 124 t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~ 157 (444)
T PRK09669 124 TAINVPYCAMPGAITNDPRERHSLQSWRFALSFI 157 (444)
T ss_pred HhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 555555566777766 447798888887776666
No 218
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=47.01 E-value=23 Score=23.93 Aligned_cols=40 Identities=25% Similarity=0.411 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhhhcccCCcc-chHHHHHHHHHHHHHHHhccc
Q 024717 8 ALIGGQVLANWLVGIDVKKGVV-PSSTASVFLSILGIICVSRGW 50 (263)
Q Consensus 8 ~AI~aG~~a~~lv~~~~~~g~~-aPF~~a~~~l~i~~ili~~~w 50 (263)
+.|+..++++|+.+.+ ++. ...+.+....++|+++....|
T Consensus 3 ~GiiGa~vGg~l~~~l---g~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 3 LGIIGAFVGGWLFGLL---GINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred eehHHHHHHHHHHHHh---cccCCchHHHHHHHHHHHHHHHHHH
Confidence 4577888999998875 333 344556677777777776654
No 219
>PRK10457 hypothetical protein; Provisional
Probab=46.49 E-value=44 Score=25.27 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhc
Q 024717 7 AALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSR 48 (263)
Q Consensus 7 ~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~ 48 (263)
+..|+=|.+++++++.....+...++...+++.++|+.+--.
T Consensus 4 i~~iiiG~iaG~lA~~i~pg~~~~G~~~tiilGiiGA~iGg~ 45 (82)
T PRK10457 4 LSWIIFGLIAGILAKWIMPGKDGGGFFMTIILGIVGAVVGGW 45 (82)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 345566666777666543223346778888887777665443
No 220
>PF07019 Rab5ip: Rab5-interacting protein (Rab5ip)
Probab=44.90 E-value=77 Score=23.38 Aligned_cols=34 Identities=15% Similarity=-0.030 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccchHHHHHHHHHHHHH
Q 024717 6 SAALIGGQVLANWLVGIDVKKGVVPSSTASVFLSILGII 44 (263)
Q Consensus 6 s~~AI~aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~i 44 (263)
.+.|+++|+.+|.+== .|+ .-|..-.+...+...
T Consensus 8 ~~~a~~~Gi~aGILgL----tg~-~Gf~~f~~~~~~~s~ 41 (81)
T PF07019_consen 8 QIIALLAGIAAGILGL----TGL-YGFIFFFLSSFLVSL 41 (81)
T ss_pred HHHHHHHHHHhhhccc----ccH-HHHHHHHHHHHHHHH
Confidence 5678999999997632 244 345544444444333
No 221
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=44.69 E-value=1.8e+02 Score=28.47 Aligned_cols=130 Identities=20% Similarity=0.248 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH
Q 024717 75 IWLLVLAQACLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV 153 (263)
Q Consensus 75 il~lg~~qslfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~ 153 (263)
...-..++.++|.+=+-.++..+|.+.+ .+.+.+.-+.-...-+...++..+...+.. |++-+..+........++
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd---~~gRr~lll~s~~~m~~~ 372 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVD---RFGRRKLLLFGAAGMSIC 372 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHH---HhccHHHHHHhHHHHHHH
Confidence 4445667888888888888888888876 233322222222333333344444444443 344445555544444444
Q ss_pred HHHhh-c----cc----h-h-hHHHHHHHHHHHHHhHhHhhHHH-HHHHhcCCCchhHHHHHHhHH
Q 024717 154 FSIIA-Y----DY----Q-E-IGILVALFCLFHACVGLILPSLA-RLRTMYVPNELRGGMISLSLA 207 (263)
Q Consensus 154 l~~~~-~----~~----~-~-~~~~~~~Fc~fE~~vG~y~P~m~-~Lr~~~Vp~e~Ratvm~~fr~ 207 (263)
+.+.. . .. . . ....+...|++-.+...-+=.+. .+-++..|.+.|++..++-..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~ 438 (513)
T KOG0254|consen 373 LVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVA 438 (513)
T ss_pred HHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHH
Confidence 33221 1 11 0 0 11234555666555533333333 477999999999999998654
No 222
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=44.06 E-value=1.2e+02 Score=30.20 Aligned_cols=117 Identities=15% Similarity=0.177 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcc-CCCCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhh
Q 024717 80 LAQACLQFSIALFWILWAPTLVA-DGREVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIA 158 (263)
Q Consensus 80 ~~qslfEgsmy~FVf~WTP~L~~-~~~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~ 158 (263)
+.+....|..+.|-.+|....+. +.++-..++|.+..|.+.++.+-+.+.+.. |++-+......-++++..+....
T Consensus 53 l~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~---rfg~R~v~i~G~~v~~~g~~lss 129 (509)
T KOG2504|consen 53 LVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCN---RFGCRTVMIAGGLVAALGLLLSS 129 (509)
T ss_pred HHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHh---hcCchHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555555544 444555999999999999998888888775 45544444444444443333332
Q ss_pred ccchhhHHHHHHHHHHHHH-----hHhHhhHHHHHHHhcCCCchhHHHHHHh
Q 024717 159 YDYQEIGILVALFCLFHAC-----VGLILPSLARLRTMYVPNELRGGMISLS 205 (263)
Q Consensus 159 ~~~~~~~~~~~~Fc~fE~~-----vG~y~P~m~~Lr~~~Vp~e~Ratvm~~f 205 (263)
. .++ +|-+++.--. .|+.+...-.+-.+| -+++|+.+.++-
T Consensus 130 F-~~~----i~~l~lt~gvi~G~G~~~~~~paiviv~~Y-F~kkR~lA~Gia 175 (509)
T KOG2504|consen 130 F-ATS----LWQLYLTFGVIGGLGLGLIYLPAVVILGTY-FEKKRALATGIA 175 (509)
T ss_pred H-Hhh----HHHHHHHHHHHhhccchhhhcchhhhhhhH-hHHHHHHHHhhh
Confidence 1 112 3322222221 255555545555555 467888888873
No 223
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=41.94 E-value=0.07 Score=50.48 Aligned_cols=180 Identities=19% Similarity=0.209 Sum_probs=91.6
Q ss_pred CCccchHHHHHHHHHHHHHHHhcccccCC------CCCc---c---h----------hh-------H-----HHHHHHhc
Q 024717 26 KGVVPSSTASVFLSILGIICVSRGWTENP------KMAF---D---D----------YR-------T-----SFFTYIFG 71 (263)
Q Consensus 26 ~g~~aPF~~a~~~l~i~~ili~~~w~ENy------g~~~---~---~----------~~-------~-----~~~~~i~~ 71 (263)
.+|+..+....+..++..+... .++|-+ |+.+ + + .+ + ..+..+++
T Consensus 168 ~~Wr~~~~~~~~~~l~~~~~~~-~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 246 (451)
T PF00083_consen 168 WGWRILLIFGAIPSLLVLLLRF-FLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFR 246 (451)
T ss_pred cccccccccccccccccccccc-ccccccceecccccccccccccccccccccccccccccccccccccccceeeeeccc
Confidence 3588898888888777666554 466643 2100 0 0 00 0 01233444
Q ss_pred Ch----hHHHHHHHHHHHHHHHHHHHHhhhhhhccC-CCCCc--hHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHH
Q 024717 72 DK----RIWLLVLAQACLQFSIALFWILWAPTLVAD-GREVH--LGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLL 144 (263)
Q Consensus 72 d~----~il~lg~~qslfEgsmy~FVf~WTP~L~~~-~~~~p--lGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~ 144 (263)
++ +++....++.+.+.+-+..+..+.|.+.+. +.+.+ ...+.. +...+++.+...+. ++++-++.+.
T Consensus 247 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~GRr~~~i 320 (451)
T PF00083_consen 247 NKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILG---LVNFLGTLLAIFLI---DRFGRRKLLI 320 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccc---cccccccccc
Confidence 42 455556666666677667777788888662 22222 111111 22222222222222 2344444454
Q ss_pred HHHHHHHHHHHHh---hccchhh-----HHHHHHHHHHHHHhH-hHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHH
Q 024717 145 YAFVVLGFVFSII---AYDYQEI-----GILVALFCLFHACVG-LILPSLARLRTMYVPNELRGGMISLSLAPANAA 212 (263)
Q Consensus 145 ~~~~~~a~~l~~~---~~~~~~~-----~~~~~~Fc~fE~~vG-~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~ 212 (263)
....+.+++.... .....+. ...+..++++-++.+ -..|....+-.|..|.+.|++.+++...--++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~ 397 (451)
T PF00083_consen 321 IGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIG 397 (451)
T ss_pred cccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccc
Confidence 4444444333322 1111111 112333443333333 334666677899999999999999988876654
No 224
>PF10912 DUF2700: Protein of unknown function (DUF2700); InterPro: IPR024483 This is a family of proteins with unknown function.
Probab=39.13 E-value=2.2e+02 Score=23.54 Aligned_cols=71 Identities=4% Similarity=-0.082 Sum_probs=47.1
Q ss_pred chHHHHHHHHHHHHHHHhcccccCCCCCcchhhH---H---HHHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024717 30 PSSTASVFLSILGIICVSRGWTENPKMAFDDYRT---S---FFTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTL 100 (263)
Q Consensus 30 aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~---~---~~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L 100 (263)
-|+.....++.+-...+...++.+..++..+... + .+....+|.+.+..+---.++.-..+...|+-.|+.
T Consensus 4 Rp~l~~ls~lgil~~~~~~~~~~~~~~~~~~~~~l~l~~~lLfGa~kn~~~~Lk~s~~v~~~~~il~~i~~l~~PV~ 80 (143)
T PF10912_consen 4 RPLLIFLSVLGILGSIYQLYFEPHWVTRVFSFVFLLLNILLLFGALKNNEKALKWSQRVTFIFLILYFILFLIFPVM 80 (143)
T ss_pred chhHHHHHHHHHHHHHHHheECCCcchhHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 4666555444444444445566555443322111 1 145567899999999999999999999999999998
No 225
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=36.84 E-value=5e+02 Score=26.91 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhHhHhhHHHHHHHhcCCCc---hhHHHHHHhHHHHHHHH
Q 024717 167 LVALFCLFHACVGLILPSLARLRTMYVPNE---LRGGMISLSLAPANAAI 213 (263)
Q Consensus 167 ~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e---~Ratvm~~fr~PlN~~v 213 (263)
.+.++.+.-...|..-|+++.+-.+--+++ +|.+..++|=-=-|+.-
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGS 137 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGS 137 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHH
Confidence 567788888888999999999999887765 36677777777777753
No 226
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=34.55 E-value=71 Score=26.20 Aligned_cols=44 Identities=25% Similarity=0.308 Sum_probs=29.9
Q ss_pred chhhHHHHHHHHHHHHH-HhhhcccCCccchHHHHHHHHHHHHHHHhc
Q 024717 2 TFFESAALIGGQVLANW-LVGIDVKKGVVPSSTASVFLSILGIICVSR 48 (263)
Q Consensus 2 t~~ns~~AI~aG~~a~~-lv~~~~~~g~~aPF~~a~~~l~i~~ili~~ 48 (263)
+.+|-++.++++.+++| .++.. ++ ..++-.-+.+++.+++++..
T Consensus 81 ~v~Nilvsv~~~~~~~~~~~~~~--~~-~~~~~~Rvllgl~~al~vlv 125 (142)
T PF11712_consen 81 TVFNILVSVFAVFFAGWYWAGYS--FG-GWSFPYRVLLGLFGALLVLV 125 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--hc-ccchHHHHHHHHHHHHHHHH
Confidence 46799999999999999 55532 31 24556666666666666543
No 227
>PF03778 DUF321: Protein of unknown function (DUF321) ; InterPro: IPR005529 This entry represents a group of tandem repeats, found in Arabidopsis species, whose sequence is distantly related to the FARP (FMRFamide) group of neuropeptides (IPR002544 from INTERPRO). The function of these repeats is not known, being mostly found in uncharacterised proetins, but they are also present in the nuclear migration protein NUM1 [].
Probab=33.59 E-value=15 Score=20.71 Aligned_cols=7 Identities=43% Similarity=0.667 Sum_probs=6.1
Q ss_pred ccccCCC
Q 024717 49 GWTENPK 55 (263)
Q Consensus 49 ~w~ENyg 55 (263)
-|.||||
T Consensus 3 FwreN~g 9 (20)
T PF03778_consen 3 FWRENHG 9 (20)
T ss_pred cceeecC
Confidence 5999997
No 228
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=30.81 E-value=5.2e+02 Score=25.29 Aligned_cols=63 Identities=21% Similarity=0.326 Sum_probs=47.2
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCCCchHHHHHHHHHHHHHhHhhhhhhhc
Q 024717 70 FGDKRIWLLVLAQACLQFSIALFWILWAPTLVA--DGREVHLGLIFPSLLGARMLGSTVFPWLIS 132 (263)
Q Consensus 70 ~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~--~~~~~plGlIFs~FM~~~mlGS~~f~~l~~ 132 (263)
.|++.-+.++..-.++=+++-++.=+|++=|.+ +-++.+.|+||++-.+..++...+++.+..
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~D 68 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISD 68 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcc
Confidence 356677777777777777766777777777754 557888999999999999999999888875
No 229
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=30.74 E-value=1.6e+02 Score=22.37 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=45.7
Q ss_pred HHhhhhhhc---cCC--CCCchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHHHHHhhccc
Q 024717 93 WILWAPTLV---ADG--REVHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFVFSIIAYDY 161 (263)
Q Consensus 93 Vf~WTP~L~---~~~--~~~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~l~~~~~~~ 161 (263)
=|.+||.+= ++. +...-|++-+.=.+.-++|+.....+.. +.++.+.+....+.+..++......+
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~---~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPR---HSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---cccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 367788762 222 4556799999999999999998887654 34566677777777776666554444
No 230
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=29.32 E-value=6.6e+02 Score=26.69 Aligned_cols=85 Identities=12% Similarity=0.194 Sum_probs=49.1
Q ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHhhhhhhcc---CC--CC--CchH-HHHHHHHHHHHHhHhhhhhhhcCCCCC
Q 024717 66 FTYIFGDKRIWLLVLAQACLQFSIALFWILWAPTLVA---DG--RE--VHLG-LIFPSLLGARMLGSTVFPWLISGPSSF 137 (263)
Q Consensus 66 ~~~i~~d~~il~lg~~qslfEgsmy~FVf~WTP~L~~---~~--~~--~plG-lIFs~FM~~~mlGS~~f~~l~~~~~~~ 137 (263)
+..+++|| +..+-.+..++|...+.=.+-+.|=+.+ +- .. .-.| +....+=+.+++|+.+.++ -|+
T Consensus 385 ~~~ll~N~-if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikk-----fkl 458 (735)
T KOG3626|consen 385 IKRLLSNP-IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKK-----FKL 458 (735)
T ss_pred HHHHhcCc-hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeee-----ecc
Confidence 55677887 5556667778899888877888887765 11 11 1122 2223334445555554443 356
Q ss_pred CchhHHHHHHHHHHHHHHH
Q 024717 138 RTEDCLLYAFVVLGFVFSI 156 (263)
Q Consensus 138 ~~~~~l~~~~~~~a~~l~~ 156 (263)
++.....++..++.++++.
T Consensus 459 ~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 459 SARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 6666666666555544443
No 231
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=29.20 E-value=4.6e+02 Score=24.20 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhHhHhhHHHHHHHhcCCCc---hhHHHHHHhHHHHHHHHHHHHHhhhhcc-ccchhHHHHHHHHHHHH
Q 024717 166 ILVALFCLFHACVGLILPSLARLRTMYVPNE---LRGGMISLSLAPANAAILLFLLLRGFYR-NIENAAMVAFAALGLFI 241 (263)
Q Consensus 166 ~~~~~Fc~fE~~vG~y~P~m~~Lr~~~Vp~e---~Ratvm~~fr~PlN~~v~~~l~~g~~~~-~~~~~~~~~~~~~~l~l 241 (263)
..+.++.+.=...|..=|.+..+-.+-.+|+ +|.+..++|-.=.|+=-.+....-.|-+ +.+-...+..+.++.++
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~ 114 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLL 114 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHH
Confidence 4678888888889999999999888887766 6788889999999996544433222322 33334455555544544
Q ss_pred HHHH
Q 024717 242 AAGC 245 (263)
Q Consensus 242 ~~~~ 245 (263)
+...
T Consensus 115 ~~~~ 118 (372)
T PF00854_consen 115 ALIV 118 (372)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 232
>PRK10457 hypothetical protein; Provisional
Probab=27.48 E-value=1.7e+02 Score=22.10 Aligned_cols=18 Identities=22% Similarity=0.387 Sum_probs=8.9
Q ss_pred hHHHHHHHHHHHHHHhhh
Q 024717 5 ESAALIGGQVLANWLVGI 22 (263)
Q Consensus 5 ns~~AI~aG~~a~~lv~~ 22 (263)
|-++.|+..++++++.+.
T Consensus 32 tiilGiiGA~iGg~l~~~ 49 (82)
T PRK10457 32 TIILGIVGAVVGGWISTF 49 (82)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444455555555555443
No 233
>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane
Probab=25.28 E-value=1.3e+02 Score=21.23 Aligned_cols=36 Identities=17% Similarity=0.099 Sum_probs=31.6
Q ss_pred hHhHhhHHHHHHHhcCCCchhHHHHHHhHHHHHHHH
Q 024717 178 VGLILPSLARLRTMYVPNELRGGMISLSLAPANAAI 213 (263)
Q Consensus 178 vG~y~P~m~~Lr~~~Vp~e~Ratvm~~fr~PlN~~v 213 (263)
.-.+||....+--.+||.+.|-...|+-.+.-|++.
T Consensus 27 ~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~L 62 (68)
T PF04117_consen 27 SWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYL 62 (68)
T ss_pred HhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHH
Confidence 356799999999999999999999999988888864
No 234
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=25.10 E-value=3.8e+02 Score=21.83 Aligned_cols=99 Identities=17% Similarity=0.212 Sum_probs=60.0
Q ss_pred CchHHHHHHHHHHHHHhHhhhhhhhcCCCCCCchhHHHHHHHHHHHH-HHHhhccchhhHHHHHHHHHHHHHhHhHhhHH
Q 024717 107 VHLGLIFPSLLGARMLGSTVFPWLISGPSSFRTEDCLLYAFVVLGFV-FSIIAYDYQEIGILVALFCLFHACVGLILPSL 185 (263)
Q Consensus 107 ~plGlIFs~FM~~~mlGS~~f~~l~~~~~~~~~~~~l~~~~~~~a~~-l~~~~~~~~~~~~~~~~Fc~fE~~vG~y~P~m 185 (263)
...+++.+.+.+...+++.+.+.+..+ .+.++.+.......... +....................-...|...|..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 115 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDR---YGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVA 115 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccc---ccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHH
Confidence 368999999999999999877777642 12223333333211111 11111121111111222222344558999999
Q ss_pred HHHHHhcCCC-chhHHHHHHhHHH
Q 024717 186 ARLRTMYVPN-ELRGGMISLSLAP 208 (263)
Q Consensus 186 ~~Lr~~~Vp~-e~Ratvm~~fr~P 208 (263)
..+-.+..|+ +.|+...+.+..-
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~ 139 (338)
T COG0477 116 SALLSEWFPEATERGLAVGLVTLG 139 (338)
T ss_pred HHHHHHhcCchhHHHHHHHHHHHH
Confidence 9999999999 7899998888774
No 235
>PTZ00207 hypothetical protein; Provisional
Probab=23.96 E-value=8e+02 Score=25.17 Aligned_cols=102 Identities=11% Similarity=0.043 Sum_probs=55.5
Q ss_pred HHHHHHHHhhhcccCCccchHHHHHHHHHHHHHHHhcccccCCCCCcchhhHHHHH-HHhcChhHHHHHHHHHHHHHHHH
Q 024717 12 GQVLANWLVGIDVKKGVVPSSTASVFLSILGIICVSRGWTENPKMAFDDYRTSFFT-YIFGDKRIWLLVLAQACLQFSIA 90 (263)
Q Consensus 12 aG~~a~~lv~~~~~~g~~aPF~~a~~~l~i~~ili~~~w~ENyg~~~~~~~~~~~~-~i~~d~~il~lg~~qslfEgsmy 90 (263)
.++.++++.|.+ |++.-+..+.++..++.++....-+... ..+.+. .+. ..+.|.-++.+.-...
T Consensus 77 ~~lp~G~L~Dr~---G~R~vllig~ll~~iG~ll~ala~~~~i-------~~s~~~l~l~----r~l~G~G~~~~~~~~~ 142 (591)
T PTZ00207 77 FLLPYSFIYDYL---GPRPIFVLSMTVFCLGTLLFALTFQEVI-------EGSVVRLSVY----NGLMTLGCMLFDLGAV 142 (591)
T ss_pred HHHHHHHHHHHh---CcHHHHHHHHHHHHHHHHHHHHHhcccc-------cCcHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 345788898874 8888888888888888776655211111 001111 111 1134455555555556
Q ss_pred HHHHhhhhhhccCCCCCchHHHHHHHHHHHHHhHhhhhhhh
Q 024717 91 LFWILWAPTLVADGREVHLGLIFPSLLGARMLGSTVFPWLI 131 (263)
Q Consensus 91 ~FVf~WTP~L~~~~~~~plGlIFs~FM~~~mlGS~~f~~l~ 131 (263)
..+.-|.| +.++.-.|+.-....++.++.+.++..+.
T Consensus 143 ~~i~~~Fp----~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 143 VTVLSVFP----SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHhCh----hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777877 23444555555555555554444444443
No 236
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=22.29 E-value=3.7e+02 Score=23.47 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHHHHHhhhcccCCc-cchHHHHHHHHHHHHHHHhcccccCC
Q 024717 4 FESAALIGGQVLANWLVGIDVKKGV-VPSSTASVFLSILGIICVSRGWTENP 54 (263)
Q Consensus 4 ~ns~~AI~aG~~a~~lv~~~~~~g~-~aPF~~a~~~l~i~~ili~~~w~ENy 54 (263)
+..+...++..+++.+.+.. +. .+.+..++.+..+|.-.+.-.++|+.
T Consensus 39 ~~~~~~~lg~~~G~~~~~~i---~~~~~~~ig~~iLi~iG~~mi~~~~~~~~ 87 (206)
T TIGR02840 39 ISGLFIFISMLLGKFLAKFL---PPKVTEILGAFILIAIGIWIIYNAFRPKK 87 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHh---chhhHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 44556666667777777653 33 57888899999999888876665543
No 237
>PF15396 FAM60A: Protein Family FAM60A
Probab=21.22 E-value=59 Score=29.05 Aligned_cols=16 Identities=38% Similarity=0.881 Sum_probs=13.3
Q ss_pred HHHHHHHHhcCCCCcc
Q 024717 244 GCMHVLKRWGKQPYQN 259 (263)
Q Consensus 244 ~~~~~~~~~~~~~~~~ 259 (263)
+|+.++|||.|.|...
T Consensus 54 ACVLLVKRwKKLP~Gs 69 (213)
T PF15396_consen 54 ACVLLVKRWKKLPPGS 69 (213)
T ss_pred HHHHHHHHHhhCCCCc
Confidence 5777889999999765
No 238
>COG4035 Predicted membrane protein [Function unknown]
Probab=21.13 E-value=1.2e+02 Score=23.86 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=26.9
Q ss_pred HHHHhhhhhhccCCCCCchHHHHH-HHHHHHHHh
Q 024717 91 LFWILWAPTLVADGREVHLGLIFP-SLLGARMLG 123 (263)
Q Consensus 91 ~FVf~WTP~L~~~~~~~plGlIFs-~FM~~~mlG 123 (263)
+-||.||-...+..+.+|-++-.+ |||+.-.+|
T Consensus 48 iaV~GwtiL~ns~~~~v~~~~~~ag~flig~v~g 81 (108)
T COG4035 48 IAVFGWTILINSWMRSVPVPLYMAGCFLIGFVLG 81 (108)
T ss_pred HHHhcceeeeeecccCCchHHHHHHHHHHHHhhc
Confidence 458899988877778899888887 999887666
No 239
>COG2261 Predicted membrane protein [Function unknown]
Probab=20.38 E-value=2.5e+02 Score=21.39 Aligned_cols=13 Identities=38% Similarity=0.621 Sum_probs=5.7
Q ss_pred HHHHHHHHHHhhh
Q 024717 10 IGGQVLANWLVGI 22 (263)
Q Consensus 10 I~aG~~a~~lv~~ 22 (263)
|.=|.+++|+++.
T Consensus 7 IIiG~iaG~lA~~ 19 (82)
T COG2261 7 IIIGLIAGWLAGK 19 (82)
T ss_pred HHHHHHHHHHHHH
Confidence 3334444444443
Done!