Query 024721
Match_columns 263
No_of_seqs 140 out of 1592
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 06:51:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024721.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024721hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3043 Predicted hydrolase re 100.0 8.7E-34 1.9E-38 214.6 22.3 236 24-259 3-241 (242)
2 PF01738 DLH: Dienelactone hyd 100.0 2.4E-31 5.3E-36 211.5 15.7 206 49-259 1-218 (218)
3 COG0412 Dienelactone hydrolase 100.0 7E-27 1.5E-31 186.5 21.0 211 48-260 13-235 (236)
4 COG1647 Esterase/lipase [Gener 99.9 5.9E-24 1.3E-28 161.1 16.3 177 59-257 14-243 (243)
5 PRK13604 luxD acyl transferase 99.9 7E-23 1.5E-27 166.8 20.3 171 49-231 22-247 (307)
6 COG1506 DAP2 Dipeptidyl aminop 99.9 6.9E-23 1.5E-27 185.3 19.4 198 49-261 378-619 (620)
7 PHA02857 monoglyceride lipase; 99.9 3.2E-22 7E-27 164.6 21.4 191 49-259 13-274 (276)
8 PLN02385 hydrolase; alpha/beta 99.9 3.5E-22 7.7E-27 169.8 21.0 199 45-260 68-347 (349)
9 PLN02298 hydrolase, alpha/beta 99.9 4.6E-22 9.9E-27 167.9 21.5 203 42-261 36-320 (330)
10 KOG1455 Lysophospholipase [Lip 99.9 2.2E-22 4.7E-27 160.0 18.2 181 61-258 54-312 (313)
11 PRK10566 esterase; Provisional 99.9 5.1E-22 1.1E-26 161.1 20.9 194 47-259 10-249 (249)
12 PF00326 Peptidase_S9: Prolyl 99.9 1.6E-22 3.5E-27 160.2 13.9 167 77-261 3-212 (213)
13 PRK10749 lysophospholipase L2; 99.9 2.9E-21 6.2E-26 162.9 20.8 208 40-258 32-329 (330)
14 PLN02652 hydrolase; alpha/beta 99.9 5.7E-21 1.2E-25 163.7 19.3 181 60-261 136-390 (395)
15 PLN02824 hydrolase, alpha/beta 99.9 2.3E-20 4.9E-25 155.1 19.0 196 41-258 10-294 (294)
16 PRK05077 frsA fermentation/res 99.9 4.7E-20 1E-24 159.2 19.8 182 49-260 181-414 (414)
17 PRK00870 haloalkane dehalogena 99.9 7.8E-20 1.7E-24 152.5 19.7 194 40-258 20-301 (302)
18 COG2267 PldB Lysophospholipase 99.9 1.3E-19 2.9E-24 149.7 19.6 205 40-261 11-297 (298)
19 PF12695 Abhydrolase_5: Alpha/ 99.9 2.9E-20 6.3E-25 138.1 14.2 142 62-228 1-145 (145)
20 PRK11460 putative hydrolase; P 99.8 3.7E-19 8.1E-24 142.5 18.7 182 59-260 15-210 (232)
21 TIGR03343 biphenyl_bphD 2-hydr 99.8 7E-19 1.5E-23 145.1 20.1 180 49-256 20-281 (282)
22 TIGR02240 PHA_depoly_arom poly 99.8 3.1E-19 6.8E-24 146.9 17.7 186 43-258 6-266 (276)
23 TIGR03056 bchO_mg_che_rel puta 99.8 7.9E-19 1.7E-23 144.2 19.4 188 41-256 8-278 (278)
24 PRK03592 haloalkane dehalogena 99.8 8.6E-19 1.9E-23 145.7 19.5 189 42-259 10-290 (295)
25 TIGR03100 hydr1_PEP hydrolase, 99.8 1.5E-18 3.2E-23 142.6 20.1 185 49-257 14-274 (274)
26 PRK10673 acyl-CoA esterase; Pr 99.8 4.6E-19 9.9E-24 144.0 16.3 170 58-257 14-254 (255)
27 PRK06489 hypothetical protein; 99.8 1.8E-18 3.9E-23 147.6 19.6 195 45-260 46-359 (360)
28 TIGR03611 RutD pyrimidine util 99.8 1.1E-18 2.4E-23 141.3 16.7 170 59-256 12-256 (257)
29 PLN02679 hydrolase, alpha/beta 99.8 2.6E-18 5.6E-23 146.6 19.5 189 45-257 67-356 (360)
30 PLN02965 Probable pheophorbida 99.8 1.4E-18 3.1E-23 141.4 16.8 169 62-257 5-252 (255)
31 TIGR01250 pro_imino_pep_2 prol 99.8 3.6E-18 7.7E-23 140.4 19.0 174 58-256 23-288 (288)
32 KOG4178 Soluble epoxide hydrol 99.8 5.2E-18 1.1E-22 137.1 19.0 194 40-258 23-320 (322)
33 PLN02578 hydrolase 99.8 7.6E-18 1.6E-22 143.4 20.4 182 44-256 71-353 (354)
34 TIGR01607 PST-A Plasmodium sub 99.8 3.8E-18 8.2E-23 143.8 17.1 161 78-256 64-331 (332)
35 PRK10349 carboxylesterase BioH 99.8 4.9E-18 1.1E-22 138.2 17.2 162 61-256 14-254 (256)
36 PRK10162 acetyl esterase; Prov 99.8 1.8E-17 3.9E-22 138.9 19.5 188 49-260 69-317 (318)
37 PF05448 AXE1: Acetyl xylan es 99.8 9.4E-18 2E-22 139.6 16.3 193 45-258 63-320 (320)
38 TIGR02427 protocat_pcaD 3-oxoa 99.8 5.3E-18 1.2E-22 136.3 14.4 169 59-256 12-251 (251)
39 TIGR01738 bioH putative pimelo 99.8 1.2E-17 2.6E-22 133.9 16.1 161 61-255 5-245 (245)
40 PF02230 Abhydrolase_2: Phosph 99.8 9.8E-18 2.1E-22 133.0 14.9 107 138-259 103-216 (216)
41 PRK03204 haloalkane dehalogena 99.8 6.6E-17 1.4E-21 133.7 19.5 187 40-255 15-285 (286)
42 PRK10985 putative hydrolase; P 99.8 6.7E-17 1.4E-21 136.0 18.8 183 59-260 57-322 (324)
43 PLN03087 BODYGUARD 1 domain co 99.8 6.6E-17 1.4E-21 140.8 18.9 187 45-257 182-478 (481)
44 TIGR02821 fghA_ester_D S-formy 99.8 1.2E-16 2.6E-21 131.4 19.1 197 49-259 27-275 (275)
45 PRK07581 hypothetical protein; 99.8 3.3E-17 7.1E-22 138.9 16.0 196 46-260 23-338 (339)
46 PRK08775 homoserine O-acetyltr 99.8 1.4E-17 3E-22 141.3 13.0 185 46-258 43-339 (343)
47 PLN02511 hydrolase 99.7 1.1E-16 2.3E-21 137.7 17.5 184 59-260 99-367 (388)
48 TIGR01836 PHA_synth_III_C poly 99.7 1.6E-16 3.5E-21 135.1 18.3 191 45-258 44-350 (350)
49 PLN02872 triacylglycerol lipas 99.7 3.1E-17 6.7E-22 140.3 13.9 186 60-261 74-392 (395)
50 KOG1552 Predicted alpha/beta h 99.7 1.4E-16 3E-21 124.6 16.0 185 49-261 48-255 (258)
51 PRK11126 2-succinyl-6-hydroxy- 99.7 1.6E-16 3.4E-21 128.1 16.9 161 60-257 2-241 (242)
52 TIGR03695 menH_SHCHC 2-succiny 99.7 7E-17 1.5E-21 129.5 14.3 168 61-256 2-251 (251)
53 PF12697 Abhydrolase_6: Alpha/ 99.7 6E-17 1.3E-21 128.1 13.3 152 63-231 1-219 (228)
54 PLN02442 S-formylglutathione h 99.7 6.8E-16 1.5E-20 127.3 19.8 198 49-260 32-282 (283)
55 PLN02211 methyl indole-3-aceta 99.7 4.6E-16 9.9E-21 127.8 18.4 182 47-256 5-268 (273)
56 PRK10115 protease 2; Provision 99.7 4.9E-16 1.1E-20 141.9 19.9 198 46-260 424-677 (686)
57 KOG2984 Predicted hydrolase [G 99.7 3.7E-17 8E-22 122.5 10.1 190 44-258 26-276 (277)
58 COG2945 Predicted hydrolase of 99.7 2.1E-16 4.5E-21 117.8 14.0 180 49-256 16-205 (210)
59 PLN00021 chlorophyllase 99.7 1E-15 2.2E-20 127.2 19.6 196 47-263 37-288 (313)
60 PF08840 BAAT_C: BAAT / Acyl-C 99.7 1.1E-16 2.3E-21 126.3 12.6 137 125-261 4-213 (213)
61 PF06500 DUF1100: Alpha/beta h 99.7 5.5E-16 1.2E-20 130.4 17.5 180 49-259 177-410 (411)
62 KOG4391 Predicted alpha/beta h 99.7 1.6E-15 3.5E-20 114.9 17.8 184 49-260 67-284 (300)
63 PLN02894 hydrolase, alpha/beta 99.7 1.9E-15 4.1E-20 130.5 20.5 181 57-262 102-389 (402)
64 TIGR01249 pro_imino_pep_1 prol 99.7 8.8E-16 1.9E-20 128.3 17.6 188 42-259 8-306 (306)
65 PRK11071 esterase YqiA; Provis 99.7 4.9E-16 1.1E-20 120.5 14.7 151 61-256 2-189 (190)
66 PLN03084 alpha/beta hydrolase 99.7 2.6E-15 5.6E-20 128.2 19.8 189 43-257 109-383 (383)
67 PRK14875 acetoin dehydrogenase 99.7 1.9E-15 4.1E-20 129.5 18.1 181 45-257 115-370 (371)
68 PRK00175 metX homoserine O-ace 99.7 9.4E-16 2E-20 131.7 15.8 187 60-260 48-376 (379)
69 TIGR01392 homoserO_Ac_trn homo 99.7 1.1E-15 2.3E-20 130.2 15.1 183 59-256 30-351 (351)
70 COG0400 Predicted esterase [Ge 99.7 1.7E-15 3.7E-20 117.6 14.4 173 61-259 19-206 (207)
71 COG0429 Predicted hydrolase of 99.7 3.3E-15 7.1E-20 120.8 15.9 195 49-261 62-343 (345)
72 COG3458 Acetyl esterase (deace 99.6 3.4E-15 7.3E-20 117.0 12.8 174 49-229 69-301 (321)
73 TIGR01840 esterase_phb esteras 99.6 5.6E-15 1.2E-19 116.9 14.5 153 52-211 2-196 (212)
74 KOG1454 Predicted hydrolase/ac 99.6 9.6E-15 2.1E-19 122.1 15.4 175 59-259 57-325 (326)
75 PLN02980 2-oxoglutarate decarb 99.6 1.6E-14 3.4E-19 142.9 18.8 182 60-258 1371-1639(1655)
76 COG0657 Aes Esterase/lipase [L 99.6 9.5E-14 2.1E-18 116.4 20.2 183 49-258 64-310 (312)
77 PF03403 PAF-AH_p_II: Platelet 99.6 1.2E-14 2.6E-19 123.8 14.1 197 61-261 100-361 (379)
78 KOG1515 Arylacetamide deacetyl 99.6 4E-13 8.6E-18 111.7 19.8 189 46-258 71-335 (336)
79 PRK05855 short chain dehydroge 99.6 4E-14 8.7E-19 128.3 15.2 190 42-258 6-292 (582)
80 PRK07868 acyl-CoA synthetase; 99.6 1.1E-13 2.4E-18 132.1 17.9 192 45-259 45-362 (994)
81 KOG4409 Predicted hydrolase/ac 99.6 1.8E-13 4E-18 111.4 16.1 185 47-257 74-363 (365)
82 COG3571 Predicted hydrolase of 99.6 5.4E-13 1.2E-17 96.6 16.5 192 51-257 4-210 (213)
83 KOG4667 Predicted esterase [Li 99.6 6.7E-14 1.5E-18 106.1 12.3 161 58-232 31-243 (269)
84 PF02273 Acyl_transf_2: Acyl t 99.6 2.2E-13 4.7E-18 105.4 15.2 171 49-230 15-239 (294)
85 TIGR01838 PHA_synth_I poly(R)- 99.6 3.2E-13 7E-18 119.0 18.1 166 47-230 172-457 (532)
86 KOG2382 Predicted alpha/beta h 99.6 9.5E-14 2.1E-18 112.6 13.2 174 58-258 50-313 (315)
87 PF12740 Chlorophyllase2: Chlo 99.5 1.2E-12 2.6E-17 104.2 18.3 184 58-262 15-254 (259)
88 KOG2100 Dipeptidyl aminopeptid 99.5 1.7E-13 3.7E-18 126.0 14.9 186 61-261 527-750 (755)
89 TIGR03101 hydr2_PEP hydrolase, 99.5 1.8E-12 3.9E-17 105.2 19.0 116 49-173 12-134 (266)
90 PF07859 Abhydrolase_3: alpha/ 99.5 7.6E-14 1.7E-18 110.3 10.6 149 63-230 1-210 (211)
91 COG3208 GrsT Predicted thioest 99.5 1.1E-12 2.5E-17 102.1 15.4 165 59-256 6-234 (244)
92 PRK05371 x-prolyl-dipeptidyl a 99.5 1.3E-12 2.7E-17 120.6 17.7 163 79-262 270-523 (767)
93 PRK06765 homoserine O-acetyltr 99.5 7.9E-13 1.7E-17 113.3 15.0 66 181-257 321-387 (389)
94 KOG2564 Predicted acetyltransf 99.5 5.1E-13 1.1E-17 105.3 12.2 112 49-169 62-178 (343)
95 PF12715 Abhydrolase_7: Abhydr 99.5 1.1E-13 2.5E-18 114.7 8.9 172 49-224 101-343 (390)
96 KOG1838 Alpha/beta hydrolase [ 99.5 5.6E-12 1.2E-16 105.7 18.2 158 59-230 124-365 (409)
97 COG4757 Predicted alpha/beta h 99.5 2E-12 4.3E-17 99.3 13.9 188 49-255 18-280 (281)
98 KOG3847 Phospholipase A2 (plat 99.5 1.4E-12 3.1E-17 104.2 13.6 198 60-261 117-374 (399)
99 PF08538 DUF1749: Protein of u 99.4 9.2E-13 2E-17 106.8 11.0 197 41-256 11-303 (303)
100 PF06821 Ser_hydrolase: Serine 99.4 7.5E-12 1.6E-16 95.1 13.5 135 63-230 1-155 (171)
101 PF02129 Peptidase_S15: X-Pro 99.4 1E-11 2.3E-16 102.0 15.5 132 84-228 53-271 (272)
102 PF07224 Chlorophyllase: Chlor 99.4 1.5E-11 3.2E-16 96.4 14.8 194 49-262 33-278 (307)
103 KOG2281 Dipeptidyl aminopeptid 99.4 7.4E-12 1.6E-16 108.7 13.5 192 49-257 626-866 (867)
104 TIGR00976 /NonD putative hydro 99.4 2.6E-11 5.6E-16 109.1 17.6 113 49-171 9-130 (550)
105 COG4188 Predicted dienelactone 99.4 4.7E-12 1E-16 104.5 11.3 164 61-229 71-295 (365)
106 TIGR01839 PHA_synth_II poly(R) 99.4 2E-11 4.2E-16 107.0 15.8 166 47-229 199-482 (560)
107 KOG2551 Phospholipase/carboxyh 99.4 7.1E-11 1.5E-15 90.5 15.4 182 59-261 4-223 (230)
108 PF00561 Abhydrolase_1: alpha/ 99.3 4.6E-12 9.9E-17 100.8 8.8 129 89-231 1-218 (230)
109 PF06057 VirJ: Bacterial virul 99.3 6.8E-11 1.5E-15 89.4 13.9 158 63-257 5-191 (192)
110 TIGR01849 PHB_depoly_PhaZ poly 99.3 1E-10 2.2E-15 99.6 15.8 189 49-258 86-406 (406)
111 PF05728 UPF0227: Uncharacteri 99.3 1E-10 2.3E-15 89.8 14.4 149 63-255 2-186 (187)
112 KOG4627 Kynurenine formamidase 99.3 1.1E-11 2.4E-16 93.5 7.9 160 50-229 57-248 (270)
113 PF10503 Esterase_phd: Esteras 99.3 2.3E-10 4.9E-15 90.0 14.9 143 61-210 17-196 (220)
114 KOG2624 Triglyceride lipase-ch 99.3 3.2E-10 6.9E-15 96.4 15.9 192 58-259 71-399 (403)
115 PF03959 FSH1: Serine hydrolas 99.2 4.1E-11 8.9E-16 94.7 9.3 165 59-230 3-203 (212)
116 PF03583 LIP: Secretory lipase 99.2 4.2E-10 9E-15 93.0 13.5 66 183-262 219-285 (290)
117 PF06342 DUF1057: Alpha/beta h 99.2 8.1E-10 1.7E-14 88.1 14.5 148 51-209 24-238 (297)
118 PRK10439 enterobactin/ferric e 99.2 4.2E-09 9E-14 91.0 17.8 182 49-256 194-407 (411)
119 COG4099 Predicted peptidase [G 99.1 3.6E-10 7.9E-15 90.1 9.9 85 138-223 267-354 (387)
120 KOG2112 Lysophospholipase [Lip 99.0 6.9E-09 1.5E-13 79.1 12.9 105 138-257 91-203 (206)
121 PF09752 DUF2048: Uncharacteri 99.0 7.2E-09 1.6E-13 85.6 13.7 144 80-230 113-330 (348)
122 PF10230 DUF2305: Uncharacteri 99.0 1.7E-08 3.7E-13 82.4 15.2 165 60-230 2-266 (266)
123 COG3509 LpqC Poly(3-hydroxybut 99.0 1E-08 2.2E-13 82.2 12.3 119 49-173 47-179 (312)
124 cd00707 Pancreat_lipase_like P 99.0 1.8E-09 4E-14 88.6 8.5 107 58-173 34-147 (275)
125 KOG3253 Predicted alpha/beta h 99.0 2.2E-08 4.7E-13 87.0 14.4 118 138-259 248-379 (784)
126 COG0596 MhpC Predicted hydrola 99.0 8.7E-08 1.9E-12 76.7 16.7 154 60-232 21-266 (282)
127 PF00975 Thioesterase: Thioest 98.9 5.1E-08 1.1E-12 77.9 14.6 169 61-255 1-229 (229)
128 COG3243 PhaC Poly(3-hydroxyalk 98.9 2.8E-08 6E-13 83.5 12.7 164 49-229 93-371 (445)
129 COG3545 Predicted esterase of 98.9 1.4E-07 3.1E-12 70.0 14.2 106 139-257 58-178 (181)
130 TIGR03230 lipo_lipase lipoprot 98.9 1.8E-08 3.8E-13 87.0 10.9 105 59-173 40-154 (442)
131 PF12048 DUF3530: Protein of u 98.9 2.4E-06 5.2E-11 71.3 23.3 184 62-258 89-309 (310)
132 KOG3101 Esterase D [General fu 98.9 5E-08 1.1E-12 74.3 11.2 94 138-231 139-264 (283)
133 COG1505 Serine proteases of th 98.9 3.9E-08 8.4E-13 85.7 12.0 201 46-260 402-648 (648)
134 TIGR03502 lipase_Pla1_cef extr 98.8 1.3E-08 2.9E-13 93.1 8.8 98 60-158 449-573 (792)
135 COG2021 MET2 Homoserine acetyl 98.8 3.5E-07 7.6E-12 75.9 15.1 112 59-171 50-180 (368)
136 KOG3975 Uncharacterized conser 98.7 1.1E-06 2.4E-11 68.8 15.7 177 49-233 18-288 (301)
137 PRK04940 hypothetical protein; 98.7 2.1E-07 4.6E-12 70.4 11.4 97 140-257 60-179 (180)
138 PF06028 DUF915: Alpha/beta hy 98.7 2.8E-07 6.1E-12 74.3 11.4 185 59-257 10-254 (255)
139 PF00756 Esterase: Putative es 98.7 3.5E-08 7.6E-13 80.0 5.9 113 129-255 101-251 (251)
140 PF12146 Hydrolase_4: Putative 98.6 9.8E-08 2.1E-12 62.7 6.3 52 49-100 4-56 (79)
141 KOG2237 Predicted serine prote 98.6 1.6E-07 3.4E-12 82.4 9.3 191 58-261 468-708 (712)
142 PF10142 PhoPQ_related: PhoPQ- 98.6 3.5E-06 7.5E-11 71.2 17.1 108 138-262 170-324 (367)
143 PF01674 Lipase_2: Lipase (cla 98.6 1.6E-07 3.5E-12 73.9 6.3 88 61-158 2-93 (219)
144 PF05705 DUF829: Eukaryotic pr 98.5 1.7E-05 3.7E-10 63.9 16.2 169 62-255 1-240 (240)
145 COG0627 Predicted esterase [Ge 98.4 4.3E-06 9.4E-11 69.5 12.3 109 141-262 153-315 (316)
146 COG3946 VirJ Type IV secretory 98.4 1E-05 2.2E-10 67.8 13.7 141 65-232 264-434 (456)
147 COG2272 PnbA Carboxylesterase 98.4 1.2E-06 2.6E-11 75.3 8.2 109 58-173 92-217 (491)
148 PF07819 PGAP1: PGAP1-like pro 98.4 3E-06 6.6E-11 67.4 9.3 100 59-171 3-121 (225)
149 PF10340 DUF2424: Protein of u 98.4 5.9E-05 1.3E-09 63.7 17.2 166 50-229 107-350 (374)
150 KOG4840 Predicted hydrolases o 98.3 2.3E-05 4.9E-10 60.6 13.1 99 61-172 36-143 (299)
151 COG1770 PtrB Protease II [Amin 98.3 9.5E-06 2.1E-10 72.0 12.3 165 58-230 446-658 (682)
152 PF03096 Ndr: Ndr family; Int 98.3 6E-05 1.3E-09 61.1 15.9 187 46-256 8-277 (283)
153 cd00312 Esterase_lipase Estera 98.3 1.8E-06 3.8E-11 77.1 7.8 114 49-173 79-213 (493)
154 PF00135 COesterase: Carboxyle 98.3 3.2E-06 7E-11 76.1 9.5 105 60-173 125-245 (535)
155 COG4814 Uncharacterized protei 98.2 0.00012 2.6E-09 57.8 14.7 183 61-257 46-286 (288)
156 PF05990 DUF900: Alpha/beta hy 98.1 5.8E-05 1.3E-09 60.5 12.1 131 59-198 17-168 (233)
157 PF05677 DUF818: Chlamydia CHL 98.1 7.9E-05 1.7E-09 61.6 12.3 96 86-193 169-300 (365)
158 PF00151 Lipase: Lipase; Inte 98.1 4.9E-06 1.1E-10 69.9 5.1 107 59-174 70-188 (331)
159 COG2819 Predicted hydrolase of 98.1 0.00026 5.5E-09 56.8 14.3 92 138-229 135-245 (264)
160 COG2382 Fes Enterochelin ester 98.1 9.8E-05 2.1E-09 60.0 12.1 88 138-229 175-281 (299)
161 PRK10252 entF enterobactin syn 98.1 4.5E-05 9.8E-10 75.9 12.4 168 59-259 1067-1294(1296)
162 PLN02733 phosphatidylcholine-s 98.0 4.4E-05 9.5E-10 66.6 10.4 88 74-173 107-201 (440)
163 KOG2931 Differentiation-relate 98.0 0.00051 1.1E-08 55.5 15.1 119 46-173 31-157 (326)
164 COG1073 Hydrolases of the alph 98.0 9.7E-05 2.1E-09 60.8 11.8 72 178-259 226-298 (299)
165 COG3150 Predicted esterase [Ge 98.0 0.00015 3.3E-09 53.6 10.7 111 122-256 44-187 (191)
166 PF11339 DUF3141: Protein of u 98.0 0.00015 3.3E-09 63.0 12.5 53 178-230 292-350 (581)
167 PF11144 DUF2920: Protein of u 98.0 0.0018 3.9E-08 55.2 18.5 38 184-222 294-331 (403)
168 COG2936 Predicted acyl esteras 98.0 2.6E-05 5.6E-10 68.9 7.6 116 47-172 28-158 (563)
169 PF07082 DUF1350: Protein of u 97.9 0.00077 1.7E-08 53.5 14.5 160 52-230 9-206 (250)
170 KOG1553 Predicted alpha/beta h 97.8 4.4E-05 9.6E-10 62.8 5.8 125 61-200 244-400 (517)
171 COG3319 Thioesterase domains o 97.7 0.00023 5.1E-09 57.4 9.0 97 61-173 1-103 (257)
172 COG4782 Uncharacterized protei 97.5 0.0014 3E-08 54.8 10.8 127 60-195 116-262 (377)
173 PF08386 Abhydrolase_4: TAP-li 97.5 0.00038 8.2E-09 48.2 6.0 59 183-256 34-92 (103)
174 KOG3724 Negative regulator of 97.4 0.0021 4.5E-08 58.6 11.3 100 47-159 66-201 (973)
175 PF05057 DUF676: Putative seri 97.4 0.00057 1.2E-08 54.2 6.9 27 59-86 3-29 (217)
176 KOG1551 Uncharacterized conser 97.3 0.00093 2E-08 53.3 6.6 57 186-257 309-365 (371)
177 PF05577 Peptidase_S28: Serine 97.3 0.00096 2.1E-08 58.7 7.5 110 61-173 29-148 (434)
178 KOG4388 Hormone-sensitive lipa 97.3 0.012 2.6E-07 52.1 13.6 71 184-262 788-858 (880)
179 PF04301 DUF452: Protein of un 97.2 0.0046 1E-07 48.4 9.5 36 138-173 55-90 (213)
180 smart00824 PKS_TE Thioesterase 97.2 0.0054 1.2E-07 47.6 10.1 137 75-231 13-197 (212)
181 COG1075 LipA Predicted acetylt 97.1 0.0017 3.8E-08 55.0 6.9 97 60-172 59-163 (336)
182 PF05576 Peptidase_S37: PS-10 97.0 0.014 3.1E-07 49.7 11.5 99 62-170 64-166 (448)
183 PF02450 LCAT: Lecithin:choles 96.8 0.0022 4.8E-08 55.5 5.5 82 76-174 66-161 (389)
184 KOG1516 Carboxylesterase and r 96.8 0.0064 1.4E-07 55.1 8.2 115 49-172 97-231 (545)
185 PTZ00472 serine carboxypeptida 96.5 0.013 2.8E-07 51.9 8.3 107 59-173 76-216 (462)
186 PF11187 DUF2974: Protein of u 96.5 0.0082 1.8E-07 47.7 6.4 46 129-174 70-124 (224)
187 cd00741 Lipase Lipase. Lipase 96.5 0.013 2.8E-07 43.6 7.2 73 125-197 12-97 (153)
188 COG4287 PqaA PhoPQ-activated p 96.5 0.0056 1.2E-07 51.2 5.4 89 138-230 232-372 (507)
189 PLN02517 phosphatidylcholine-s 96.2 0.0099 2.1E-07 53.2 5.3 89 76-173 157-263 (642)
190 KOG2541 Palmitoyl protein thio 96.1 0.064 1.4E-06 43.2 9.2 97 61-172 24-127 (296)
191 PF11288 DUF3089: Protein of u 96.0 0.012 2.7E-07 45.8 4.7 72 81-159 39-114 (207)
192 COG4947 Uncharacterized protei 96.0 0.077 1.7E-06 39.8 8.5 105 122-229 82-216 (227)
193 KOG2183 Prolylcarboxypeptidase 96.0 0.023 4.9E-07 48.4 6.4 97 61-158 81-185 (492)
194 KOG2521 Uncharacterized conser 95.9 0.33 7.2E-06 41.1 13.1 68 183-260 225-292 (350)
195 PF06259 Abhydrolase_8: Alpha/ 95.8 0.053 1.1E-06 41.4 7.4 74 124-197 91-171 (177)
196 PF01764 Lipase_3: Lipase (cla 95.8 0.014 3E-07 42.5 4.3 21 138-158 62-82 (140)
197 PF02089 Palm_thioest: Palmito 95.8 0.061 1.3E-06 43.9 8.1 102 60-172 5-115 (279)
198 TIGR03712 acc_sec_asp2 accesso 95.6 0.38 8.3E-06 42.2 12.4 104 51-172 279-389 (511)
199 cd00519 Lipase_3 Lipase (class 95.5 0.069 1.5E-06 42.6 7.5 72 125-196 112-194 (229)
200 COG4553 DepA Poly-beta-hydroxy 95.4 0.47 1E-05 38.9 11.6 71 183-260 339-409 (415)
201 KOG2565 Predicted hydrolases o 95.3 0.11 2.3E-06 43.9 7.8 102 45-159 130-248 (469)
202 KOG2369 Lecithin:cholesterol a 95.3 0.025 5.5E-07 49.0 4.3 69 76-158 125-200 (473)
203 PLN02606 palmitoyl-protein thi 95.2 0.18 3.8E-06 41.7 8.9 95 61-171 27-130 (306)
204 PLN02633 palmitoyl protein thi 94.8 0.36 7.8E-06 40.0 9.6 97 61-172 26-130 (314)
205 PF01083 Cutinase: Cutinase; 94.7 0.062 1.3E-06 41.2 4.7 74 124-197 64-149 (179)
206 COG2830 Uncharacterized protei 94.6 0.074 1.6E-06 39.4 4.6 34 140-173 57-90 (214)
207 PLN02847 triacylglycerol lipas 94.1 0.19 4.2E-06 45.2 7.0 21 138-158 249-269 (633)
208 PF07519 Tannase: Tannase and 93.4 0.25 5.4E-06 44.0 6.6 74 177-258 347-427 (474)
209 PLN02310 triacylglycerol lipas 93.3 0.057 1.2E-06 46.5 2.3 61 140-200 209-281 (405)
210 KOG3967 Uncharacterized conser 93.2 0.97 2.1E-05 35.3 8.6 35 138-172 188-226 (297)
211 PLN02209 serine carboxypeptida 93.1 1.1 2.4E-05 39.5 10.0 35 139-173 166-212 (437)
212 PLN03016 sinapoylglucose-malat 93.0 0.76 1.6E-05 40.5 8.9 78 89-172 116-209 (433)
213 PF06850 PHB_depo_C: PHB de-po 93.0 0.24 5.3E-06 38.0 5.1 88 162-258 115-202 (202)
214 PLN02454 triacylglycerol lipas 93.0 0.11 2.4E-06 44.9 3.5 35 124-158 209-246 (414)
215 PLN03037 lipase class 3 family 92.8 0.067 1.5E-06 47.3 2.1 77 125-201 302-392 (525)
216 KOG4372 Predicted alpha/beta h 92.7 0.35 7.6E-06 41.4 6.0 88 58-157 78-167 (405)
217 PF00450 Peptidase_S10: Serine 92.5 0.45 9.8E-06 41.4 6.9 108 59-173 39-181 (415)
218 PLN00413 triacylglycerol lipas 92.4 0.18 3.9E-06 44.2 4.0 23 136-158 280-302 (479)
219 PLN02162 triacylglycerol lipas 91.9 0.2 4.3E-06 43.8 3.7 21 138-158 276-296 (475)
220 KOG1282 Serine carboxypeptidas 91.4 2.2 4.8E-05 37.7 9.7 106 59-171 72-211 (454)
221 PLN02934 triacylglycerol lipas 91.3 0.26 5.7E-06 43.6 3.9 32 127-158 307-339 (515)
222 PLN02408 phospholipase A1 90.8 0.27 6E-06 41.8 3.5 56 141-196 201-267 (365)
223 PLN02571 triacylglycerol lipas 90.7 0.27 5.8E-06 42.6 3.4 18 141-158 227-244 (413)
224 PF07519 Tannase: Tannase and 90.7 2.1 4.5E-05 38.3 9.0 73 137-209 112-186 (474)
225 PF05277 DUF726: Protein of un 90.3 1.3 2.9E-05 37.5 7.1 60 138-197 218-289 (345)
226 KOG2182 Hydrolytic enzymes of 90.1 2.6 5.6E-05 37.3 8.7 85 85-172 115-206 (514)
227 COG5153 CVT17 Putative lipase 89.9 0.67 1.4E-05 37.9 4.7 51 122-172 257-308 (425)
228 KOG4540 Putative lipase essent 89.9 0.67 1.4E-05 37.9 4.7 51 122-172 257-308 (425)
229 PLN02324 triacylglycerol lipas 89.4 0.38 8.3E-06 41.6 3.3 18 141-158 216-233 (415)
230 PLN02753 triacylglycerol lipas 89.4 0.23 4.9E-06 44.1 1.9 19 140-158 312-330 (531)
231 PLN02719 triacylglycerol lipas 89.2 0.4 8.8E-06 42.5 3.3 19 140-158 298-316 (518)
232 PLN02761 lipase class 3 family 89.0 0.26 5.6E-06 43.7 2.0 19 140-158 294-312 (527)
233 PLN02802 triacylglycerol lipas 88.3 0.53 1.1E-05 41.7 3.5 18 141-158 331-348 (509)
234 PF03283 PAE: Pectinacetyleste 88.0 1.5 3.2E-05 37.6 5.9 34 125-158 138-174 (361)
235 PF04083 Abhydro_lipase: Parti 87.0 1.2 2.7E-05 27.6 3.6 33 42-74 16-57 (63)
236 KOG4569 Predicted lipase [Lipi 85.5 0.9 2E-05 38.6 3.3 33 126-158 156-189 (336)
237 COG2939 Carboxypeptidase C (ca 80.4 11 0.00023 33.7 7.9 38 121-158 173-216 (498)
238 KOG2029 Uncharacterized conser 80.3 3 6.6E-05 37.7 4.6 36 123-158 506-544 (697)
239 PF09994 DUF2235: Uncharacteri 80.0 16 0.00035 30.1 8.6 36 123-158 73-110 (277)
240 PF08237 PE-PPE: PE-PPE domain 79.6 5.3 0.00011 31.8 5.4 21 138-158 46-66 (225)
241 TIGR02690 resist_ArsH arsenica 78.7 5.5 0.00012 31.6 5.2 29 125-154 107-142 (219)
242 KOG4389 Acetylcholinesterase/B 78.3 2.8 6.1E-05 37.1 3.7 85 81-173 158-255 (601)
243 COG0431 Predicted flavoprotein 76.6 6.1 0.00013 30.3 4.9 61 76-159 57-120 (184)
244 PTZ00472 serine carboxypeptida 74.1 12 0.00026 33.4 6.7 65 183-257 364-458 (462)
245 PF06309 Torsin: Torsin; Inte 74.1 3 6.5E-05 29.9 2.3 41 48-88 40-81 (127)
246 PF06441 EHN: Epoxide hydrolas 71.1 13 0.00028 26.0 5.0 32 43-74 72-106 (112)
247 PLN02213 sinapoylglucose-malat 69.2 16 0.00035 30.8 6.1 64 183-257 233-316 (319)
248 KOG2170 ATPase of the AAA+ sup 68.0 3.7 8E-05 34.1 1.9 44 48-91 97-141 (344)
249 PLN02213 sinapoylglucose-malat 67.0 8.3 0.00018 32.5 4.0 79 90-174 3-97 (319)
250 KOG1202 Animal-type fatty acid 66.9 60 0.0013 32.8 9.6 46 128-173 2169-2219(2376)
251 PLN03016 sinapoylglucose-malat 63.9 21 0.00044 31.6 5.9 64 183-257 347-430 (433)
252 PLN02209 serine carboxypeptida 62.4 22 0.00049 31.4 5.9 63 183-256 351-433 (437)
253 PF00450 Peptidase_S10: Serine 59.7 11 0.00024 32.8 3.5 64 183-256 330-414 (415)
254 TIGR02884 spore_pdaA delta-lac 57.5 15 0.00033 29.1 3.7 34 62-95 188-221 (224)
255 COG4822 CbiK Cobalamin biosynt 57.5 87 0.0019 24.8 7.5 60 60-144 137-198 (265)
256 PF10605 3HBOH: 3HB-oligomer h 56.0 25 0.00054 32.3 5.0 75 183-257 555-636 (690)
257 PF13956 Ibs_toxin: Toxin Ibs, 54.6 6.9 0.00015 17.4 0.7 11 1-11 1-11 (19)
258 COG3673 Uncharacterized conser 53.2 22 0.00047 30.0 3.9 34 125-158 105-140 (423)
259 KOG1282 Serine carboxypeptidas 52.2 27 0.00058 31.1 4.6 64 184-257 364-447 (454)
260 KOG2385 Uncharacterized conser 52.0 14 0.00031 33.0 2.9 43 128-170 433-484 (633)
261 smart00827 PKS_AT Acyl transfe 49.9 20 0.00043 29.6 3.4 30 129-158 71-100 (298)
262 PF00698 Acyl_transf_1: Acyl t 48.2 14 0.00029 31.1 2.2 30 129-158 73-102 (318)
263 cd07198 Patatin Patatin-like p 47.9 23 0.0005 26.7 3.2 33 128-160 14-46 (172)
264 TIGR03131 malonate_mdcH malona 47.9 22 0.00047 29.4 3.3 29 130-158 66-94 (295)
265 PRK10279 hypothetical protein; 47.0 23 0.0005 29.6 3.3 32 128-159 21-52 (300)
266 TIGR02764 spore_ybaN_pdaB poly 45.8 23 0.00049 27.2 2.9 34 62-95 153-188 (191)
267 COG0529 CysC Adenylylsulfate k 45.6 1.4E+02 0.003 23.1 7.5 38 59-96 21-59 (197)
268 cd07207 Pat_ExoU_VipD_like Exo 45.4 26 0.00057 26.8 3.3 32 128-159 15-46 (194)
269 cd07225 Pat_PNPLA6_PNPLA7 Pata 44.3 27 0.00059 29.3 3.3 32 128-159 31-62 (306)
270 COG3340 PepE Peptidase E [Amin 44.2 56 0.0012 25.8 4.7 37 60-96 32-70 (224)
271 cd07210 Pat_hypo_W_succinogene 44.0 31 0.00068 27.3 3.5 31 129-159 17-47 (221)
272 PRK05282 (alpha)-aspartyl dipe 43.0 1.7E+02 0.0038 23.4 7.6 37 60-96 31-69 (233)
273 COG2312 Erythromycin esterase 42.8 45 0.00097 29.0 4.3 92 61-158 45-159 (405)
274 KOG4530 Predicted flavoprotein 42.6 70 0.0015 24.0 4.7 38 77-137 77-115 (199)
275 PF12242 Eno-Rase_NADH_b: NAD( 41.4 44 0.00095 21.6 3.1 34 125-158 21-58 (78)
276 cd07205 Pat_PNPLA6_PNPLA7_NTE1 41.2 40 0.00086 25.3 3.6 32 128-159 16-47 (175)
277 cd07227 Pat_Fungal_NTE1 Fungal 40.4 35 0.00076 28.0 3.4 33 128-160 26-58 (269)
278 cd07228 Pat_NTE_like_bacteria 40.1 43 0.00094 25.2 3.6 33 128-160 16-48 (175)
279 TIGR00128 fabD malonyl CoA-acy 39.3 34 0.00074 28.0 3.2 28 131-158 73-101 (290)
280 cd03409 Chelatase_Class_II Cla 38.0 1.2E+02 0.0026 20.1 6.5 21 125-145 45-65 (101)
281 cd07209 Pat_hypo_Ecoli_Z1214_l 37.5 40 0.00087 26.5 3.2 33 129-161 15-47 (215)
282 COG1255 Uncharacterized protei 37.4 37 0.0008 23.9 2.5 22 76-97 24-45 (129)
283 PF06500 DUF1100: Alpha/beta h 37.1 25 0.00055 30.7 2.1 67 182-257 188-254 (411)
284 PF01656 CbiA: CobQ/CobB/MinD/ 36.8 45 0.00097 25.2 3.4 22 75-96 14-35 (195)
285 TIGR02069 cyanophycinase cyano 36.4 62 0.0013 26.2 4.2 39 58-96 26-65 (250)
286 PRK13883 conjugal transfer pro 36.0 29 0.00062 25.7 1.9 33 62-96 53-85 (151)
287 COG1752 RssA Predicted esteras 35.7 40 0.00087 28.1 3.1 31 129-159 28-58 (306)
288 cd07224 Pat_like Patatin-like 35.2 45 0.00097 26.7 3.2 33 128-160 15-49 (233)
289 cd01983 Fer4_NifH The Fer4_Nif 35.0 68 0.0015 20.6 3.7 22 74-95 13-34 (99)
290 PF10081 Abhydrolase_9: Alpha/ 33.7 57 0.0012 27.0 3.5 87 75-172 48-146 (289)
291 KOG2310 DNA repair exonuclease 33.6 99 0.0021 28.2 5.1 68 185-263 21-88 (646)
292 PRK14581 hmsF outer membrane N 33.5 1.6E+02 0.0034 27.9 6.7 37 60-96 48-93 (672)
293 COG3233 Predicted deacetylase 33.5 2.5E+02 0.0054 22.4 7.5 36 61-96 4-44 (233)
294 PHA02519 plasmid partition pro 33.1 79 0.0017 27.5 4.5 35 61-96 106-143 (387)
295 cd03818 GT1_ExpC_like This fam 32.2 69 0.0015 27.6 4.1 31 63-96 2-32 (396)
296 COG1152 CdhA CO dehydrogenase/ 32.2 2.8E+02 0.006 25.8 7.6 37 59-95 498-536 (772)
297 COG2185 Sbm Methylmalonyl-CoA 31.8 2.1E+02 0.0045 21.1 9.8 39 58-96 10-48 (143)
298 cd03146 GAT1_Peptidase_E Type 31.2 78 0.0017 24.8 3.9 38 59-96 30-68 (212)
299 PRK14582 pgaB outer membrane N 30.9 1.7E+02 0.0037 27.6 6.5 37 60-96 48-93 (671)
300 COG0552 FtsY Signal recognitio 30.7 3.4E+02 0.0075 23.2 9.5 112 80-209 213-338 (340)
301 PRK09810 entericidin A; Provis 30.7 64 0.0014 18.0 2.3 16 1-16 1-16 (41)
302 PF14084 DUF4264: Protein of u 30.5 35 0.00076 20.2 1.3 14 249-262 17-30 (52)
303 PRK02399 hypothetical protein; 30.1 3.9E+02 0.0084 23.6 8.6 96 64-159 6-116 (406)
304 cd01819 Patatin_and_cPLA2 Pata 29.4 67 0.0014 23.7 3.1 30 129-158 15-46 (155)
305 cd02067 B12-binding B12 bindin 29.4 1.9E+02 0.0042 19.9 7.5 19 78-96 17-35 (119)
306 PRK10673 acyl-CoA esterase; Pr 29.2 2.8E+02 0.0061 21.7 7.3 62 183-257 16-77 (255)
307 KOG3179 Predicted glutamine sy 29.1 2.8E+02 0.006 21.9 6.2 101 130-236 82-193 (245)
308 cd07222 Pat_PNPLA4 Patatin-lik 29.0 63 0.0014 26.1 3.1 31 129-159 16-50 (246)
309 cd07204 Pat_PNPLA_like Patatin 28.8 72 0.0016 25.7 3.4 31 129-159 16-50 (243)
310 PRK03094 hypothetical protein; 28.3 72 0.0016 20.8 2.6 21 76-96 9-29 (80)
311 cd03416 CbiX_SirB_N Sirohydroc 28.2 1.9E+02 0.004 19.3 5.7 25 63-87 2-28 (101)
312 COG0552 FtsY Signal recognitio 28.1 1.3E+02 0.0029 25.6 4.8 38 58-95 136-174 (340)
313 TIGR02873 spore_ylxY probable 28.1 68 0.0015 26.3 3.2 33 62-95 232-264 (268)
314 COG4874 Uncharacterized protei 27.8 2.4E+02 0.0052 22.8 5.9 27 78-105 60-86 (318)
315 PF04084 ORC2: Origin recognit 27.7 2.4E+02 0.0053 23.9 6.4 102 68-171 60-177 (326)
316 KOG0780 Signal recognition par 27.5 1.2E+02 0.0026 26.6 4.4 43 55-97 95-140 (483)
317 TIGR03566 FMN_reduc_MsuE FMN r 27.4 1.3E+02 0.0029 22.5 4.5 51 75-148 57-110 (174)
318 KOG1209 1-Acyl dihydroxyaceton 27.4 1.3E+02 0.0028 24.1 4.3 34 61-96 7-40 (289)
319 TIGR02964 xanthine_xdhC xanthi 27.4 2.4E+02 0.0053 22.8 6.2 22 76-97 111-132 (246)
320 PRK06490 glutamine amidotransf 27.3 3.3E+02 0.0071 21.9 9.3 91 61-158 9-103 (239)
321 PF09989 DUF2229: CoA enzyme a 26.9 80 0.0017 25.1 3.3 37 60-96 183-220 (221)
322 PF01583 APS_kinase: Adenylyls 26.7 1.2E+02 0.0026 22.6 4.0 36 61-96 2-38 (156)
323 cd07208 Pat_hypo_Ecoli_yjju_li 26.5 74 0.0016 25.9 3.1 32 128-159 14-46 (266)
324 KOG2853 Possible oxidoreductas 25.8 2.2E+02 0.0048 24.6 5.6 32 63-96 89-121 (509)
325 cd07230 Pat_TGL4-5_like Triacy 25.7 73 0.0016 28.1 3.1 32 128-159 89-120 (421)
326 cd03129 GAT1_Peptidase_E_like 25.7 1.3E+02 0.0027 23.5 4.2 38 59-96 28-65 (210)
327 PRK05368 homoserine O-succinyl 25.6 1.1E+02 0.0023 25.8 3.9 32 124-158 121-152 (302)
328 COG0331 FabD (acyl-carrier-pro 25.4 76 0.0017 26.7 3.0 28 131-158 74-103 (310)
329 cd07220 Pat_PNPLA2 Patatin-lik 25.4 84 0.0018 25.5 3.2 32 128-159 20-55 (249)
330 TIGR01007 eps_fam capsular exo 25.3 1.4E+02 0.0031 22.9 4.4 36 61-96 17-54 (204)
331 PF13207 AAA_17: AAA domain; P 25.0 1.1E+02 0.0025 20.9 3.6 31 63-96 1-32 (121)
332 KOG1283 Serine carboxypeptidas 25.0 3.4E+02 0.0074 23.2 6.5 108 60-173 31-166 (414)
333 COG1856 Uncharacterized homolo 24.9 3.7E+02 0.008 21.7 6.8 91 62-168 89-185 (275)
334 PF03698 UPF0180: Uncharacteri 24.9 85 0.0018 20.5 2.5 21 76-96 9-29 (80)
335 TIGR01303 IMP_DH_rel_1 IMP deh 24.8 3.1E+02 0.0067 24.7 6.9 60 76-158 225-284 (475)
336 PRK13230 nitrogenase reductase 24.8 1.1E+02 0.0024 25.0 3.9 23 74-96 15-37 (279)
337 KOG1202 Animal-type fatty acid 24.7 2.9E+02 0.0064 28.4 6.9 99 129-232 571-694 (2376)
338 PF03205 MobB: Molybdopterin g 24.5 1.3E+02 0.0027 21.9 3.7 34 63-96 2-37 (140)
339 cd04950 GT1_like_1 Glycosyltra 24.5 1.4E+02 0.003 25.6 4.6 38 60-97 4-42 (373)
340 COG3640 CooC CO dehydrogenase 24.5 3.9E+02 0.0084 21.7 6.9 33 64-96 3-37 (255)
341 cd03413 CbiK_C Anaerobic cobal 24.3 2.4E+02 0.0052 19.2 6.9 27 62-88 2-29 (103)
342 cd07232 Pat_PLPL Patain-like p 24.3 82 0.0018 27.7 3.1 32 128-159 83-114 (407)
343 COG5510 Predicted small secret 24.2 93 0.002 17.6 2.2 17 1-17 1-20 (44)
344 PRK11627 hypothetical protein; 24.2 3.4E+02 0.0075 21.0 6.8 13 79-91 83-95 (192)
345 PF15240 Pro-rich: Proline-ric 23.9 57 0.0012 24.9 1.8 17 2-18 1-17 (179)
346 PRK13255 thiopurine S-methyltr 23.7 1.2E+02 0.0025 24.0 3.6 16 81-96 52-67 (218)
347 PF09314 DUF1972: Domain of un 23.6 3.5E+02 0.0075 20.9 6.5 99 75-173 21-129 (185)
348 cd07020 Clp_protease_NfeD_1 No 23.5 3.4E+02 0.0073 20.7 7.4 34 128-161 48-85 (187)
349 cd07231 Pat_SDP1-like Sugar-De 23.5 92 0.002 26.3 3.1 31 129-159 85-115 (323)
350 cd02037 MRP-like MRP (Multiple 23.5 1.2E+02 0.0026 22.5 3.6 22 75-96 15-36 (169)
351 PRK03147 thiol-disulfide oxido 23.4 2.5E+02 0.0054 20.6 5.4 20 77-96 83-102 (173)
352 PRK13869 plasmid-partitioning 23.1 1.6E+02 0.0035 25.8 4.7 34 62-96 122-158 (405)
353 KOG3079 Uridylate kinase/adeny 23.0 1.4E+02 0.0031 23.1 3.8 33 59-94 6-39 (195)
354 PF01935 DUF87: Domain of unkn 23.0 1.6E+02 0.0035 23.1 4.4 51 47-100 10-63 (229)
355 cd07212 Pat_PNPLA9 Patatin-lik 22.8 1.1E+02 0.0023 25.8 3.4 17 143-159 35-51 (312)
356 COG3494 Uncharacterized protei 22.7 2.9E+02 0.0063 22.6 5.5 58 78-146 18-76 (279)
357 TIGR01378 thi_PPkinase thiamin 22.6 1E+02 0.0022 24.1 3.1 39 119-158 67-105 (203)
358 TIGR01969 minD_arch cell divis 22.6 1.4E+02 0.003 23.6 4.1 22 75-96 16-37 (251)
359 PLN02757 sirohydrochlorine fer 22.5 3.3E+02 0.0071 20.2 7.1 20 126-145 59-78 (154)
360 PF07015 VirC1: VirC1 protein; 22.5 2.2E+02 0.0048 22.9 4.9 23 74-96 16-38 (231)
361 TIGR03709 PPK2_rel_1 polyphosp 22.4 1.2E+02 0.0026 24.9 3.5 37 60-96 55-92 (264)
362 cd02040 NifH NifH gene encodes 22.4 1.4E+02 0.003 24.0 4.1 23 74-96 15-37 (270)
363 KOG2941 Beta-1,4-mannosyltrans 22.4 2.1E+02 0.0046 24.7 5.0 40 57-97 10-49 (444)
364 PF14253 AbiH: Bacteriophage a 22.4 53 0.0011 26.6 1.6 15 138-152 233-247 (270)
365 cd07229 Pat_TGL3_like Triacylg 22.3 1E+02 0.0022 26.9 3.3 32 128-159 99-130 (391)
366 cd07211 Pat_PNPLA8 Patatin-lik 22.3 94 0.002 25.9 3.0 17 143-159 44-60 (308)
367 COG4594 FecB ABC-type Fe3+-cit 22.2 2.4E+02 0.0053 23.1 5.0 20 176-195 235-254 (310)
368 KOG2183 Prolylcarboxypeptidase 22.2 1.5E+02 0.0032 26.2 4.1 68 184-259 416-485 (492)
369 PF03358 FMN_red: NADPH-depend 22.1 3.1E+02 0.0067 19.7 5.7 59 75-156 59-126 (152)
370 PF05673 DUF815: Protein of un 22.1 4E+02 0.0086 21.7 6.3 51 64-139 55-106 (249)
371 cd02032 Bchl_like This family 22.0 1.2E+02 0.0027 24.4 3.7 23 74-96 14-36 (267)
372 TIGR03453 partition_RepA plasm 21.9 1.7E+02 0.0036 25.4 4.6 35 62-96 105-141 (387)
373 cd03145 GAT1_cyanophycinase Ty 21.8 1.1E+02 0.0023 24.2 3.1 38 59-96 28-66 (217)
374 PF13477 Glyco_trans_4_2: Glyc 21.8 2.9E+02 0.0062 19.3 8.2 23 75-97 11-33 (139)
375 PRK13705 plasmid-partitioning 21.7 1.5E+02 0.0033 25.8 4.2 36 60-96 105-143 (388)
376 cd02036 MinD Bacterial cell di 21.7 1.6E+02 0.0035 21.7 4.1 22 75-96 15-36 (179)
377 PRK13236 nitrogenase reductase 21.3 1.4E+02 0.003 24.8 3.9 34 63-96 8-42 (296)
378 PLN00180 NDF6 (NDH-dependent f 21.0 2E+02 0.0043 21.4 4.0 59 185-261 111-170 (180)
379 cd03131 GATase1_HTS Type 1 glu 21.0 41 0.00089 25.6 0.6 34 122-158 82-115 (175)
380 PRK13835 conjugal transfer pro 20.9 63 0.0014 23.8 1.5 19 75-93 69-87 (145)
381 cd07206 Pat_TGL3-4-5_SDP1 Tria 20.9 1.1E+02 0.0024 25.6 3.1 31 129-159 86-116 (298)
382 cd08194 Fe-ADH6 Iron-containin 20.8 4.7E+02 0.01 22.5 7.1 63 63-146 26-88 (375)
383 TIGR01287 nifH nitrogenase iro 20.5 1.5E+02 0.0032 24.1 3.9 22 75-96 15-36 (275)
384 cd02033 BchX Chlorophyllide re 20.5 2.1E+02 0.0044 24.4 4.7 35 62-96 32-67 (329)
385 PF05577 Peptidase_S28: Serine 20.3 2.1E+02 0.0046 25.1 5.0 41 184-232 377-417 (434)
386 TIGR01425 SRP54_euk signal rec 20.3 1.8E+02 0.0039 25.8 4.4 38 59-96 98-136 (429)
387 TIGR03840 TMPT_Se_Te thiopurin 20.1 1.5E+02 0.0032 23.4 3.5 16 81-96 49-64 (213)
No 1
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=100.00 E-value=8.7e-34 Score=214.60 Aligned_cols=236 Identities=38% Similarity=0.653 Sum_probs=211.0
Q ss_pred CcCccCCCCccCCCCCCceEEeeCCeeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCC
Q 024721 24 QAPCYREPPTFCPTCGAGTVTELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAAN 103 (263)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~ 103 (263)
...|+.......+....|++..++|++.|+.....++.+||++-..+|.+.+..+..++.++..||.|++||++.|.+++
T Consensus 3 ~~~cc~~~~~~~~~~~~g~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~ 82 (242)
T KOG3043|consen 3 PMPCCPDGKIAAEVDDGGREEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWS 82 (242)
T ss_pred CCCCCCCcccccccCCCCceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCC
Confidence 34567666665555667888899999999998776667899999999998888899999999999999999999999998
Q ss_pred CCCCCcchhhhhhcCCCccccccHHHHHHHHHhcC-CCeEEEEEEeccHHHHHHhh-cCCCccEEEEecCCCCChhhhhc
Q 024721 104 PSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKG-VSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVTEDEIKV 181 (263)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~~~~~~~~ 181 (263)
+......+..|+.+++......++..++++|+.++ ..+|+++|+||||..+..+. ..+.+.++++++|.+.+..+...
T Consensus 83 ~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d~~D~~~ 162 (242)
T KOG3043|consen 83 PSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDSADIAN 162 (242)
T ss_pred CCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCChhHHhc
Confidence 88777888999999999999999999999999886 77999999999999999866 45599999999999999999999
Q ss_pred ccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccc-cCCCCChhhhhHHHHHHHHHHHHHHHHh
Q 024721 182 VKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTV-RYFVNDTFAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 182 ~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~fl~~~l 259 (263)
+++|+|++.++.|+++|++.+.++.+.++.+.....++.+|+|.+|+|.. +.+..++++..+.+++++.++.||++++
T Consensus 163 vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 163 VKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999997665555789999999999986 6777888888999999999999999886
No 2
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.97 E-value=2.4e-31 Score=211.50 Aligned_cols=206 Identities=31% Similarity=0.568 Sum_probs=151.7
Q ss_pred eeEEEeCCCCC--CeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhh---hhcCCCccc
Q 024721 49 LKAYVTGPPHS--KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTW---RKNHTTDKG 123 (263)
Q Consensus 49 ~~~~~~~~~~~--~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~---~~~~~~~~~ 123 (263)
+++|+..|++. .|+||++|+.+|.+ +..+.+++.|+++||.|++||+++|.+..+.........+ .... .+..
T Consensus 1 ~~ay~~~P~~~~~~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 78 (218)
T PF01738_consen 1 IDAYVARPEGGGPRPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR-PEQV 78 (218)
T ss_dssp EEEEEEEETTSSSEEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS-HHHH
T ss_pred CeEEEEeCCCCCCCCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh-HHHH
Confidence 46888888764 68899999999987 6889999999999999999999876652222222221111 1112 3566
Q ss_pred cccHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhhcCC-CccEEEEecCC-CC--ChhhhhcccccEEEEecCCCCC
Q 024721 124 YEDAKPVIAALKEKG---VSAVGAAGFCWGGKVAVKLASNQ-DVQAAVLLHPS-NV--TEDEIKVVKVPIAVLGAERDNG 196 (263)
Q Consensus 124 ~~d~~~~~~~l~~~~---~~~i~~~G~S~Gg~~a~~~a~~~-~i~~~v~~~~~-~~--~~~~~~~~~~p~l~i~G~~D~~ 196 (263)
..|+.+++++++++. ..+|+++|+||||.+++.++... .++++++++|. .. ......++++|+|+++|++|+.
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~~~~~~~~~~~P~l~~~g~~D~~ 158 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPPPLEDAPKIKAPVLILFGENDPF 158 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGGHHHHGGG--S-EEEEEETT-TT
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCcchhhhcccCCCEeecCccCCCC
Confidence 788999999998874 56999999999999999998654 89999999992 22 2245788999999999999999
Q ss_pred CChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHh
Q 024721 197 LPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l 259 (263)
++.+..+.+.+.+ .+.+.+.++++|||++|+|..+... ..+..+.+++|+++++||+++|
T Consensus 159 ~~~~~~~~~~~~l-~~~~~~~~~~~y~ga~HgF~~~~~~--~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 159 FPPEEVEALEEAL-KAAGVDVEVHVYPGAGHGFANPSRP--PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp S-HHHHHHHHHHH-HCTTTTEEEEEETT--TTTTSTTST--T--HHHHHHHHHHHHHHHCC--
T ss_pred CChHHHHHHHHHH-HhcCCcEEEEECCCCcccccCCCCc--ccCHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999 4567799999999999999877665 4455889999999999999986
No 3
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=7e-27 Score=186.51 Aligned_cols=211 Identities=23% Similarity=0.423 Sum_probs=166.4
Q ss_pred CeeEEEeCCCCCC--eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCC--Ccchhh-hhhcCCCcc
Q 024721 48 GLKAYVTGPPHSK--KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNP--KYDKDT-WRKNHTTDK 122 (263)
Q Consensus 48 ~~~~~~~~~~~~~--~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~--~~~~~~-~~~~~~~~~ 122 (263)
.+++|+..|.++. |+||++|+.+|.+ +.++.+++.|+++||.|++||++...+...... ...... .....+..+
T Consensus 13 ~~~~~~a~P~~~~~~P~VIv~hei~Gl~-~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (236)
T COG0412 13 ELPAYLARPAGAGGFPGVIVLHEIFGLN-PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAE 91 (236)
T ss_pred eEeEEEecCCcCCCCCEEEEEecccCCc-hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHH
Confidence 4899999987543 6899999999987 588999999999999999999974332222111 111111 112334467
Q ss_pred ccccHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhhcCC-CccEEEEecCCCCCh--hhhhcccccEEEEecCCCCC
Q 024721 123 GYEDAKPVIAALKEKG---VSAVGAAGFCWGGKVAVKLASNQ-DVQAAVLLHPSNVTE--DEIKVVKVPIAVLGAERDNG 196 (263)
Q Consensus 123 ~~~d~~~~~~~l~~~~---~~~i~~~G~S~Gg~~a~~~a~~~-~i~~~v~~~~~~~~~--~~~~~~~~p~l~i~G~~D~~ 196 (263)
...|+.+++++|..+. .++|+++|+||||.+++.++... .+++.++++|..... ....++.+|+|+++|+.|+.
T Consensus 92 ~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~~~~~~~~~~pvl~~~~~~D~~ 171 (236)
T COG0412 92 VLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTADAPKIKVPVLLHLAGEDPY 171 (236)
T ss_pred HHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCcccccccccCcEEEEecccCCC
Confidence 8899999999998774 67999999999999999999665 899999999998743 34568999999999999999
Q ss_pred CChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccC-CCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 197 LPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRY-FVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
+|.+..+.+.+++. ..+..+++.+|+++.|+|.... +....++....+.+|+++.+||++++.
T Consensus 172 ~p~~~~~~~~~~~~-~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 172 IPAADVDALAAALE-DAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CChhHHHHHHHHHH-hcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999994 4445789999999999998653 111233447899999999999999875
No 4
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=5.9e-24 Score=161.13 Aligned_cols=177 Identities=22% Similarity=0.300 Sum_probs=148.2
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKG 138 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 138 (263)
.+.+||++||..|.. ...+.++++|.++||.|.+|.|+ |++.. .+.+...+++++.+|+....++|.+.+
T Consensus 14 G~~AVLllHGFTGt~-~Dvr~Lgr~L~e~GyTv~aP~yp-GHG~~--------~e~fl~t~~~DW~~~v~d~Y~~L~~~g 83 (243)
T COG1647 14 GNRAVLLLHGFTGTP-RDVRMLGRYLNENGYTVYAPRYP-GHGTL--------PEDFLKTTPRDWWEDVEDGYRDLKEAG 83 (243)
T ss_pred CCEEEEEEeccCCCc-HHHHHHHHHHHHCCceEecCCCC-CCCCC--------HHHHhcCCHHHHHHHHHHHHHHHHHcC
Confidence 447899999999987 47899999999999999999994 55422 222334566888899999999999888
Q ss_pred CCeEEEEEEeccHHHHHHhhcCCCccEEEEecCCCCC-------------------------------------------
Q 024721 139 VSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT------------------------------------------- 175 (263)
Q Consensus 139 ~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~------------------------------------------- 175 (263)
.+.|.++|.||||.+++.+|.+..++++|.+++....
T Consensus 84 y~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~ 163 (243)
T COG1647 84 YDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTT 163 (243)
T ss_pred CCeEEEEeecchhHHHHHHHhhCCccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHH
Confidence 9999999999999999999988778999888765420
Q ss_pred ----------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHH
Q 024721 176 ----------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAA 245 (263)
Q Consensus 176 ----------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~ 245 (263)
...+..|..|+++++|.+|+++|.+.++.+++...+. ++++.+|++.||.++.+ +.++
T Consensus 164 ~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~---~KeL~~~e~SgHVIt~D---------~Erd 231 (243)
T COG1647 164 AQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESD---DKELKWLEGSGHVITLD---------KERD 231 (243)
T ss_pred HHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCC---cceeEEEccCCceeecc---------hhHH
Confidence 2346678899999999999999999999999998432 79999999999998765 5689
Q ss_pred HHHHHHHHHHHH
Q 024721 246 EAHEDMINWFEK 257 (263)
Q Consensus 246 ~~~~~~~~fl~~ 257 (263)
++.+.+..||++
T Consensus 232 ~v~e~V~~FL~~ 243 (243)
T COG1647 232 QVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHhhC
Confidence 999999999973
No 5
>PRK13604 luxD acyl transferase; Provisional
Probab=99.91 E-value=7e-23 Score=166.80 Aligned_cols=171 Identities=14% Similarity=0.242 Sum_probs=129.4
Q ss_pred eeEEEeCCCC----CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccc
Q 024721 49 LKAYVTGPPH----SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGY 124 (263)
Q Consensus 49 ~~~~~~~~~~----~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (263)
+++|+..|++ +.+.||+.|| ++.....+..++++|+++||.|+.+|+|++.|.+.+.. ...+.....
T Consensus 22 L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--------~~~t~s~g~ 92 (307)
T PRK13604 22 IRVWETLPKENSPKKNNTILIASG-FARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--------DEFTMSIGK 92 (307)
T ss_pred EEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--------ccCcccccH
Confidence 8999998852 2244555555 44444568999999999999999999863322221111 112223346
Q ss_pred ccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcCCCccEEEEecCCCCC-----------------------------
Q 024721 125 EDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT----------------------------- 175 (263)
Q Consensus 125 ~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~----------------------------- 175 (263)
.|+.++++|+++.+.++|+++||||||.+++.+|.+.+++++|+.+|....
T Consensus 93 ~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~ 172 (307)
T PRK13604 93 NSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGH 172 (307)
T ss_pred HHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCcccHHHHHHHhhhcccccCcccccccccccccc
Confidence 899999999998877899999999999999888877678888887765420
Q ss_pred ----------------h------hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccc
Q 024721 176 ----------------E------DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTV 231 (263)
Q Consensus 176 ----------------~------~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 231 (263)
. +..+++++|+|++||++|+++|.+.++.+++.++. .++++..+||+.|.|..
T Consensus 173 ~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s---~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 173 NLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS---EQCKLYSLIGSSHDLGE 247 (307)
T ss_pred cccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc---CCcEEEEeCCCccccCc
Confidence 0 12445679999999999999999999999998742 27999999999999964
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.91 E-value=6.9e-23 Score=185.32 Aligned_cols=198 Identities=18% Similarity=0.297 Sum_probs=151.8
Q ss_pred eeEEEeCCCCCC-----eeEEEEecccCCC-chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcc
Q 024721 49 LKAYVTGPPHSK-----KAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDK 122 (263)
Q Consensus 49 ~~~~~~~~~~~~-----~~vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (263)
+.+|+..|.+.. |.||++|||.... ...+......|+++||.|+.+|+|+..|+. . .+........-..
T Consensus 378 i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG-~----~F~~~~~~~~g~~ 452 (620)
T COG1506 378 IHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYG-R----EFADAIRGDWGGV 452 (620)
T ss_pred EEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccH-H----HHHHhhhhccCCc
Confidence 889999886433 6788999986432 235677888999999999999995322211 0 1111111122245
Q ss_pred ccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEecCCCC------------------------
Q 024721 123 GYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNV------------------------ 174 (263)
Q Consensus 123 ~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~------------------------ 174 (263)
..+|+.+.++++.+. +.+|++++|+|.||.++++++ ..+.++++++..+...
T Consensus 453 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (620)
T COG1506 453 DLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPP 532 (620)
T ss_pred cHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhcCCHHHhCCCcc
Confidence 668999999988776 567999999999999999977 4468888888666431
Q ss_pred ----------ChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHH
Q 024721 175 ----------TEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSA 244 (263)
Q Consensus 175 ----------~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~ 244 (263)
+.....++++|+|+|||++|..+|.++..++.++|+ ..|.++++++||+.+|++..+ +..
T Consensus 533 ~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~-~~g~~~~~~~~p~e~H~~~~~---------~~~ 602 (620)
T COG1506 533 EDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALK-RKGKPVELVVFPDEGHGFSRP---------ENR 602 (620)
T ss_pred cChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHH-HcCceEEEEEeCCCCcCCCCc---------hhH
Confidence 012456789999999999999999999999999995 478899999999999999763 446
Q ss_pred HHHHHHHHHHHHHHhhh
Q 024721 245 AEAHEDMINWFEKHVKC 261 (263)
Q Consensus 245 ~~~~~~~~~fl~~~l~~ 261 (263)
.+.++++++||+++++.
T Consensus 603 ~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 603 VKVLKEILDWFKRHLKQ 619 (620)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 78999999999999875
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.91 E-value=3.2e-22 Score=164.63 Aligned_cols=191 Identities=18% Similarity=0.232 Sum_probs=135.5
Q ss_pred eeEEEeCCCCCCeeEEEE-ecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccH
Q 024721 49 LKAYVTGPPHSKKAVLMI-SDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDA 127 (263)
Q Consensus 49 ~~~~~~~~~~~~~~vv~~-h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (263)
+.++++.|....+++|++ ||. +.+...|..+++.|+++||.|+++|++ |.|.+... ... ..+.....+|+
T Consensus 13 l~~~~~~~~~~~~~~v~llHG~-~~~~~~~~~~~~~l~~~g~~via~D~~-G~G~S~~~-~~~------~~~~~~~~~d~ 83 (276)
T PHA02857 13 IYCKYWKPITYPKALVFISHGA-GEHSGRYEELAENISSLGILVFSHDHI-GHGRSNGE-KMM------IDDFGVYVRDV 83 (276)
T ss_pred EEEEeccCCCCCCEEEEEeCCC-ccccchHHHHHHHHHhCCCEEEEccCC-CCCCCCCc-cCC------cCCHHHHHHHH
Confidence 555556664333345554 665 444568899999999999999999996 44332211 000 11223455677
Q ss_pred HHHHHHHHhc-CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC-----------------------------
Q 024721 128 KPVIAALKEK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT----------------------------- 175 (263)
Q Consensus 128 ~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~----------------------------- 175 (263)
...++.+.+. ...+++++|||+||.+++.+| ..+ .++++|+++|....
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPE 163 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHh
Confidence 7777766543 345899999999999999988 344 68999998764200
Q ss_pred --------------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCce
Q 024721 176 --------------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDH 217 (263)
Q Consensus 176 --------------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~ 217 (263)
...+.++++|+|+++|++|.++|++..+.+.+.+.. ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~----~~ 239 (276)
T PHA02857 164 SVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC----NR 239 (276)
T ss_pred hccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC----Cc
Confidence 012346789999999999999999999988887632 57
Q ss_pred eEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHh
Q 024721 218 LVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 218 ~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l 259 (263)
++.++++++|....+.. +.++++++.+.+||+++.
T Consensus 240 ~~~~~~~~gH~~~~e~~-------~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 240 EIKIYEGAKHHLHKETD-------EVKKSVMKEIETWIFNRV 274 (276)
T ss_pred eEEEeCCCcccccCCch-------hHHHHHHHHHHHHHHHhc
Confidence 89999999998865422 347899999999999863
No 8
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.90 E-value=3.5e-22 Score=169.78 Aligned_cols=199 Identities=21% Similarity=0.237 Sum_probs=137.7
Q ss_pred eeCCeeEE--EeCCC--CCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC
Q 024721 45 ELGGLKAY--VTGPP--HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 120 (263)
Q Consensus 45 ~~~~~~~~--~~~~~--~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (263)
+.+|++.+ ...|+ .++++||++||+.+....++..+++.|+++||.|+++|++ |.|.+.... . ...++
T Consensus 68 ~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~-G~G~S~~~~--~-----~~~~~ 139 (349)
T PLN02385 68 NSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYP-GFGLSEGLH--G-----YIPSF 139 (349)
T ss_pred cCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCC-CCCCCCCCC--C-----CcCCH
Confidence 34554433 34454 2356677888765553335688999999999999999996 443322110 0 01234
Q ss_pred ccccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC---------------------
Q 024721 121 DKGYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV--------------------- 174 (263)
Q Consensus 121 ~~~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~--------------------- 174 (263)
+..++|+..+++.+... +..+++++||||||.+++.++ .++ .++++|+++|...
T Consensus 140 ~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T PLN02385 140 DDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANL 219 (349)
T ss_pred HHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHH
Confidence 56677888888877543 334799999999999999987 334 6888887764210
Q ss_pred ------------------C---------------------------------hhhhhcccccEEEEecCCCCCCChHHHH
Q 024721 175 ------------------T---------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMK 203 (263)
Q Consensus 175 ------------------~---------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~ 203 (263)
. ...+.++++|+|+++|++|.++|++..+
T Consensus 220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~ 299 (349)
T PLN02385 220 LPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSK 299 (349)
T ss_pred CCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHH
Confidence 0 0113457899999999999999999999
Q ss_pred HHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 204 RFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 204 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
.+++.+.. .+++++++++++|....+... +..+++.+.+.+||++++.
T Consensus 300 ~l~~~~~~---~~~~l~~i~~~gH~l~~e~p~------~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 300 FLYEKASS---SDKKLKLYEDAYHSILEGEPD------EMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHcCC---CCceEEEeCCCeeecccCCCh------hhHHHHHHHHHHHHHHhcc
Confidence 88888732 257899999999987543222 2256789999999999875
No 9
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=4.6e-22 Score=167.91 Aligned_cols=203 Identities=20% Similarity=0.252 Sum_probs=141.6
Q ss_pred eEEeeCCeeEEE--eCCCC---CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhh
Q 024721 42 TVTELGGLKAYV--TGPPH---SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRK 116 (263)
Q Consensus 42 ~~~~~~~~~~~~--~~~~~---~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~ 116 (263)
.+...+|.+.++ ..|++ +++.||++||+.+.....+..+++.|+++||.|+++|+| |.|.+.... . +
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~r-GhG~S~~~~--~---~-- 107 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLE-GHGRSEGLR--A---Y-- 107 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCC-CCCCCCCcc--c---c--
Confidence 344456755444 33432 345578888875443234677888999999999999996 333322110 0 0
Q ss_pred cCCCccccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC-----------------
Q 024721 117 NHTTDKGYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV----------------- 174 (263)
Q Consensus 117 ~~~~~~~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~----------------- 174 (263)
..+.+...+|+.++++++... +..+++++||||||.+++.++ ..+ +++++|+++|...
T Consensus 108 ~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PLN02298 108 VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTF 187 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHH
Confidence 123456778999999999764 234799999999999999977 344 6999988765310
Q ss_pred -----------------C--------------------------------------hhhhhcccccEEEEecCCCCCCCh
Q 024721 175 -----------------T--------------------------------------EDEIKVVKVPIAVLGAERDNGLPP 199 (263)
Q Consensus 175 -----------------~--------------------------------------~~~~~~~~~p~l~i~G~~D~~~~~ 199 (263)
. ...+.++++|+|+++|++|+++|.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~ 267 (330)
T PLN02298 188 VARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDP 267 (330)
T ss_pred HHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCH
Confidence 0 001235779999999999999999
Q ss_pred HHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhh
Q 024721 200 AQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
+..+.+++.++. .+++++++++++|........ ...+++.+.+.+||++++..
T Consensus 268 ~~~~~l~~~i~~---~~~~l~~~~~a~H~~~~e~pd------~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 268 DVSRALYEEAKS---EDKTIKIYDGMMHSLLFGEPD------ENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred HHHHHHHHHhcc---CCceEEEcCCcEeeeecCCCH------HHHHHHHHHHHHHHHHhccC
Confidence 999999888732 257899999999987543221 23578899999999998754
No 10
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.90 E-value=2.2e-22 Score=159.95 Aligned_cols=181 Identities=24% Similarity=0.345 Sum_probs=134.3
Q ss_pred eeEEEEecccCC-CchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc--
Q 024721 61 KAVLMISDIYGD-EPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-- 137 (263)
Q Consensus 61 ~~vv~~h~~~g~-~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-- 137 (263)
+++|++.||+|. ....|..++..|+..||.|+++|++ |.|.+.+. ..+ -.+++..++|+...++.++.+
T Consensus 54 r~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~-GhG~SdGl-----~~y--i~~~d~~v~D~~~~~~~i~~~~e 125 (313)
T KOG1455|consen 54 RGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYE-GHGRSDGL-----HAY--VPSFDLVVDDVISFFDSIKEREE 125 (313)
T ss_pred ceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeecc-CCCcCCCC-----ccc--CCcHHHHHHHHHHHHHHHhhccc
Confidence 455555555554 3357888999999999999999996 33322211 000 113456677888888876655
Q ss_pred -CCCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCCC---------------------------------------
Q 024721 138 -GVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNVT--------------------------------------- 175 (263)
Q Consensus 138 -~~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~~--------------------------------------- 175 (263)
..-+.+++||||||.+++.++. +| ...+++++.|....
T Consensus 126 ~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kd 205 (313)
T KOG1455|consen 126 NKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKD 205 (313)
T ss_pred cCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCC
Confidence 2348999999999999999984 55 56777776654300
Q ss_pred ---------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEc
Q 024721 176 ---------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTY 222 (263)
Q Consensus 176 ---------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 222 (263)
.+.+..+++|.|++||++|.+..++.++.+++...++ ++++..|
T Consensus 206 p~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~---DKTlKlY 282 (313)
T KOG1455|consen 206 PEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSS---DKTLKLY 282 (313)
T ss_pred HHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCC---CCceecc
Confidence 2456788999999999999999999999999998443 8999999
Q ss_pred CCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 223 PGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 223 ~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
||..|+....... +..+.++..|++||+++
T Consensus 283 pGm~H~Ll~gE~~------en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 283 PGMWHSLLSGEPD------ENVEIVFGDIISWLDER 312 (313)
T ss_pred ccHHHHhhcCCCc------hhHHHHHHHHHHHHHhc
Confidence 9999999752222 45789999999999976
No 11
>PRK10566 esterase; Provisional
Probab=99.90 E-value=5.1e-22 Score=161.06 Aligned_cols=194 Identities=20% Similarity=0.286 Sum_probs=132.9
Q ss_pred CCeeEEEeCCCC----CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCc
Q 024721 47 GGLKAYVTGPPH----SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTD 121 (263)
Q Consensus 47 ~~~~~~~~~~~~----~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~ 121 (263)
.++..+.+.|.+ +.|.||++||..+.. ..+..+++.|+++||.|+++|++ +|.+.. .........|... ..
T Consensus 10 ~~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~-~~~~~~~~~~~~~--~~ 85 (249)
T PRK10566 10 AGIEVLHAFPAGQRDTPLPTVFFYHGFTSSK-LVYSYFAVALAQAGFRVIMPDAPMHGARFS-GDEARRLNHFWQI--LL 85 (249)
T ss_pred cCcceEEEcCCCCCCCCCCEEEEeCCCCccc-chHHHHHHHHHhCCCEEEEecCCcccccCC-CccccchhhHHHH--HH
Confidence 455555444432 346788888876654 46788999999999999999996 333211 1111111111110 11
Q ss_pred cccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEecCCCC---------C-------------
Q 024721 122 KGYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNV---------T------------- 175 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~---------~------------- 175 (263)
...+|+..+++++.+. +.++|+++|||+||.+++.++ ..+.+++.+.+.+... .
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (249)
T PRK10566 86 QNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEF 165 (249)
T ss_pred HHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHH
Confidence 2346777788887765 467999999999999999987 4566776655432210 0
Q ss_pred ------------hhhhhcc-cccEEEEecCCCCCCChHHHHHHHHHHHcCCCC--ceeEEEcCCCCccccccCCCCChhh
Q 024721 176 ------------EDEIKVV-KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKF--DHLVKTYPGVCHGWTVRYFVNDTFA 240 (263)
Q Consensus 176 ------------~~~~~~~-~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~~H~~~~~~~~~~~~~ 240 (263)
...+.++ ++|+|+++|++|+++|.+..+.+.+.++. .+. +.++.++++++|.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~H~~~---------- 234 (249)
T PRK10566 166 NNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRE-RGLDKNLTCLWEPGVRHRIT---------- 234 (249)
T ss_pred HHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh-cCCCcceEEEecCCCCCccC----------
Confidence 0123444 68999999999999999999999999954 332 478889999999873
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q 024721 241 VNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 241 ~~~~~~~~~~~~~fl~~~l 259 (263)
.+.++.+.+||+++|
T Consensus 235 ----~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 235 ----PEALDAGVAFFRQHL 249 (249)
T ss_pred ----HHHHHHHHHHHHhhC
Confidence 257899999999875
No 12
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.89 E-value=1.6e-22 Score=160.23 Aligned_cols=167 Identities=21% Similarity=0.333 Sum_probs=125.1
Q ss_pred hHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhc---CCCccccccHHHHHHHHHhc---CCCeEEEEEEecc
Q 024721 77 YRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN---HTTDKGYEDAKPVIAALKEK---GVSAVGAAGFCWG 150 (263)
Q Consensus 77 ~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~---~~~~i~~~G~S~G 150 (263)
|......|+++||.|+.+|+|++.+.. ..|... ......++|+..+++++.++ +++||+++|+|+|
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g--------~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~G 74 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYG--------KDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYG 74 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSH--------HHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccc--------hhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEccccc
Confidence 345678899999999999996433211 111111 11234568899999999876 6789999999999
Q ss_pred HHHHHHhhc-CC-CccEEEEecCCCCC---------------------------------hhhhhc--ccccEEEEecCC
Q 024721 151 GKVAVKLAS-NQ-DVQAAVLLHPSNVT---------------------------------EDEIKV--VKVPIAVLGAER 193 (263)
Q Consensus 151 g~~a~~~a~-~~-~i~~~v~~~~~~~~---------------------------------~~~~~~--~~~p~l~i~G~~ 193 (263)
|.+++.++. .+ .++++++.+|.... ...+.+ +.+|+|+++|++
T Consensus 75 G~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~ 154 (213)
T PF00326_consen 75 GYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGEN 154 (213)
T ss_dssp HHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETT
T ss_pred ccccchhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCC
Confidence 999999874 44 78999998775421 123445 789999999999
Q ss_pred CCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhh
Q 024721 194 DNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 194 D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
|+.+|.+...++.++|+ +.+.+.++.++|+++|++... +...+..+++.+||+++|+.
T Consensus 155 D~~Vp~~~s~~~~~~L~-~~g~~~~~~~~p~~gH~~~~~---------~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 155 DPRVPPSQSLRLYNALR-KAGKPVELLIFPGEGHGFGNP---------ENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp BSSSTTHHHHHHHHHHH-HTTSSEEEEEETT-SSSTTSH---------HHHHHHHHHHHHHHHHHTT-
T ss_pred CCccCHHHHHHHHHHHH-hcCCCEEEEEcCcCCCCCCCc---------hhHHHHHHHHHHHHHHHcCC
Confidence 99999999999999995 567789999999999988544 34568999999999999975
No 13
>PRK10749 lysophospholipase L2; Provisional
Probab=99.89 E-value=2.9e-21 Score=162.94 Aligned_cols=208 Identities=14% Similarity=0.118 Sum_probs=142.6
Q ss_pred CceEEeeCCeeEEEe--CCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhc
Q 024721 40 AGTVTELGGLKAYVT--GPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN 117 (263)
Q Consensus 40 ~~~~~~~~~~~~~~~--~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~ 117 (263)
+..+...+|.+.++. .++.++++||++||. +.+...|..++..+++.||.|+++|++ |.|.+.........+ ..
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~-~~~~~~y~~~~~~l~~~g~~v~~~D~~-G~G~S~~~~~~~~~~--~~ 107 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGR-IESYVKYAELAYDLFHLGYDVLIIDHR-GQGRSGRLLDDPHRG--HV 107 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCc-cchHHHHHHHHHHHHHCCCeEEEEcCC-CCCCCCCCCCCCCcC--cc
Confidence 344555677655554 343445667777775 444457888999999999999999996 333222111000000 01
Q ss_pred CCCccccccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC--------------------
Q 024721 118 HTTDKGYEDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV-------------------- 174 (263)
Q Consensus 118 ~~~~~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~-------------------- 174 (263)
.+++...+|+..+++.+... +..+++++||||||.+++.++ ..+ .++++|+.+|...
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGH 187 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHh
Confidence 24466778888888876544 557899999999999999877 333 7888888776310
Q ss_pred --------------------------Ch-------------------------------------hhhhcccccEEEEec
Q 024721 175 --------------------------TE-------------------------------------DEIKVVKVPIAVLGA 191 (263)
Q Consensus 175 --------------------------~~-------------------------------------~~~~~~~~p~l~i~G 191 (263)
.. ..+.++++|+|+++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 267 (330)
T PRK10749 188 PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQA 267 (330)
T ss_pred cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Confidence 00 012356899999999
Q ss_pred CCCCCCChHHHHHHHHHHHcCCC--CceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 192 ERDNGLPPAQMKRFDEILYAKPK--FDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 192 ~~D~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
++|++++++..+.+.+.++.+.. .+++++++||++|....+.+ ..++++++.+.+||+++
T Consensus 268 ~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~-------~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 268 EEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD-------AMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc-------HHHHHHHHHHHHHHhhc
Confidence 99999999999989888853221 35689999999998765432 23678999999999864
No 14
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.88 E-value=5.7e-21 Score=163.69 Aligned_cols=181 Identities=22% Similarity=0.304 Sum_probs=133.8
Q ss_pred CeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-C
Q 024721 60 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-G 138 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~ 138 (263)
+++||++||+.+.. ..|..+++.|+++||.|+++|++ |.|.+..... ...+.+...+|+..+++++... +
T Consensus 136 ~~~Vl~lHG~~~~~-~~~~~~a~~L~~~Gy~V~~~D~r-GhG~S~~~~~-------~~~~~~~~~~Dl~~~l~~l~~~~~ 206 (395)
T PLN02652 136 RGILIIIHGLNEHS-GRYLHFAKQLTSCGFGVYAMDWI-GHGGSDGLHG-------YVPSLDYVVEDTEAFLEKIRSENP 206 (395)
T ss_pred ceEEEEECCchHHH-HHHHHHHHHHHHCCCEEEEeCCC-CCCCCCCCCC-------CCcCHHHHHHHHHHHHHHHHHhCC
Confidence 45677777765543 46788999999999999999996 3332221100 0123355678999999998765 3
Q ss_pred CCeEEEEEEeccHHHHHHhhcCC----CccEEEEecCCCC--------------------------------C-------
Q 024721 139 VSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPSNV--------------------------------T------- 175 (263)
Q Consensus 139 ~~~i~~~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~~--------------------------------~------- 175 (263)
..+++++||||||.+++.++.++ +++++++.+|... .
T Consensus 207 ~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~ 286 (395)
T PLN02652 207 GVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAA 286 (395)
T ss_pred CCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHH
Confidence 44899999999999999887543 6888888776420 0
Q ss_pred ------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCC
Q 024721 176 ------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGV 225 (263)
Q Consensus 176 ------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 225 (263)
...+.++++|+|+++|++|.++|++..+.+++.+.. .++++++++++
T Consensus 287 ~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~---~~k~l~~~~ga 363 (395)
T PLN02652 287 LLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAAS---RHKDIKLYDGF 363 (395)
T ss_pred HHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCC---CCceEEEECCC
Confidence 011345789999999999999999999998888632 25788999999
Q ss_pred CccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhh
Q 024721 226 CHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 226 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
+|....+ ...+++++.+.+||++++..
T Consensus 364 ~H~l~~e---------~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 364 LHDLLFE---------PEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred eEEeccC---------CCHHHHHHHHHHHHHHHhhc
Confidence 9987553 23679999999999998753
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=2.3e-20 Score=155.07 Aligned_cols=196 Identities=16% Similarity=0.113 Sum_probs=136.3
Q ss_pred ceEEeeCCeeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC
Q 024721 41 GTVTELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 120 (263)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (263)
..+.++++...++...+.++++||++||+.+.. ..|..+++.|++. |+|+++|++ |.|.+....... ......+++
T Consensus 10 ~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dlp-G~G~S~~~~~~~-~~~~~~~~~ 85 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNA-DHWRKNTPVLAKS-HRVYAIDLL-GYGYSDKPNPRS-APPNSFYTF 85 (294)
T ss_pred CceEEEcCeEEEEEEcCCCCCeEEEECCCCCCh-hHHHHHHHHHHhC-CeEEEEcCC-CCCCCCCCcccc-ccccccCCH
Confidence 445577887777665443457899999877665 5788899999876 799999995 443332210000 000012344
Q ss_pred ccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCC------------------------
Q 024721 121 DKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNV------------------------ 174 (263)
Q Consensus 121 ~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~------------------------ 174 (263)
+.+.+|+.++++.+ +.+++.++||||||.+++.+|. +| +++++|++.+...
T Consensus 86 ~~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T PLN02824 86 ETWGEQLNDFCSDV---VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRE 162 (294)
T ss_pred HHHHHHHHHHHHHh---cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhc
Confidence 56666777766655 5678999999999999999884 34 7899988764210
Q ss_pred --------------------------C-------------------------------------hhhhhcccccEEEEec
Q 024721 175 --------------------------T-------------------------------------EDEIKVVKVPIAVLGA 191 (263)
Q Consensus 175 --------------------------~-------------------------------------~~~~~~~~~p~l~i~G 191 (263)
. ...++++++|+|+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 242 (294)
T PLN02824 163 TAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWG 242 (294)
T ss_pred hhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEe
Confidence 0 0123457899999999
Q ss_pred CCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 192 ERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 192 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
++|.++|.+..+.+.+.+ . ..++++++++||.... +..+++.+.+.+||+++
T Consensus 243 ~~D~~~~~~~~~~~~~~~-~----~~~~~~i~~~gH~~~~----------e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 243 EKDPWEPVELGRAYANFD-A----VEDFIVLPGVGHCPQD----------EAPELVNPLIESFVARH 294 (294)
T ss_pred cCCCCCChHHHHHHHhcC-C----ccceEEeCCCCCChhh----------hCHHHHHHHHHHHHhcC
Confidence 999999988777654443 1 4678999999997754 33578999999999864
No 16
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.86 E-value=4.7e-20 Score=159.23 Aligned_cols=182 Identities=18% Similarity=0.205 Sum_probs=130.5
Q ss_pred eeEEEeCCCC-CCeeEEEEecccCCC-chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccccc
Q 024721 49 LKAYVTGPPH-SKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED 126 (263)
Q Consensus 49 ~~~~~~~~~~-~~~~vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (263)
+.+|+..|.. .+.++|++|||+++. ...+..+++.|+++||.|+++|++ |.|.+.... . . .+....
T Consensus 181 l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~p-G~G~s~~~~-~-------~---~d~~~~ 248 (414)
T PRK05077 181 ITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMP-SVGFSSKWK-L-------T---QDSSLL 248 (414)
T ss_pred EEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCC-CCCCCCCCC-c-------c---ccHHHH
Confidence 8899887753 234567777777653 346777899999999999999996 443221110 0 0 111123
Q ss_pred HHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC--------------------------
Q 024721 127 AKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT-------------------------- 175 (263)
Q Consensus 127 ~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~-------------------------- 175 (263)
...+++++... +.++|+++|||+||.+++.+| .++ +++++|++.|....
T Consensus 249 ~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~lg~~ 328 (414)
T PRK05077 249 HQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRLGMH 328 (414)
T ss_pred HHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHHhCCC
Confidence 35778888765 678999999999999999988 445 89999998764310
Q ss_pred ------------------hhhh-hcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCC
Q 024721 176 ------------------EDEI-KVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVN 236 (263)
Q Consensus 176 ------------------~~~~-~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~ 236 (263)
...+ .++++|+|+++|++|+++|.+..+.+.+..+ +.++.++|++ |.+
T Consensus 329 ~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-----~~~l~~i~~~-~~~------- 395 (414)
T PRK05077 329 DASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-----DGKLLEIPFK-PVY------- 395 (414)
T ss_pred CCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-----CCeEEEccCC-Ccc-------
Confidence 0001 3578999999999999999999987766552 5678999985 434
Q ss_pred ChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 237 DTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 237 ~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
+..+++.+.+.+||+++|.
T Consensus 396 -----e~~~~~~~~i~~wL~~~l~ 414 (414)
T PRK05077 396 -----RNFDKALQEISDWLEDRLC 414 (414)
T ss_pred -----CCHHHHHHHHHHHHHHHhC
Confidence 2357999999999998863
No 17
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=7.8e-20 Score=152.46 Aligned_cols=194 Identities=17% Similarity=0.207 Sum_probs=131.0
Q ss_pred CceEEeeCC-----eeEEEeCCCC-CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCC-CCCCCCCCCCCcchh
Q 024721 40 AGTVTELGG-----LKAYVTGPPH-SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKD 112 (263)
Q Consensus 40 ~~~~~~~~~-----~~~~~~~~~~-~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~-~g~~~~~~~~~~~~~ 112 (263)
++....+++ ++.++..... .+|+||++||+.+.. ..|..+++.|++.||.|+++|++ +|.+..+...
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~-~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~----- 93 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWS-YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRR----- 93 (302)
T ss_pred CceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCch-hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCc-----
Confidence 345555555 6666654332 357899999876554 57889999998889999999996 3433211100
Q ss_pred hhhhcCCCccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCC----------------
Q 024721 113 TWRKNHTTDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNV---------------- 174 (263)
Q Consensus 113 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~---------------- 174 (263)
..++++...+|+.++++.+ +.+++.++|||+||.+++.+|. .+ ++++++++.+...
T Consensus 94 ---~~~~~~~~a~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 167 (302)
T PRK00870 94 ---EDYTYARHVEWMRSWFEQL---DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAF 167 (302)
T ss_pred ---ccCCHHHHHHHHHHHHHHc---CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcc
Confidence 1123344555655555544 6678999999999999999884 33 7888877653200
Q ss_pred ---------------------C------------------------------------------hhhhhcccccEEEEec
Q 024721 175 ---------------------T------------------------------------------EDEIKVVKVPIAVLGA 191 (263)
Q Consensus 175 ---------------------~------------------------------------------~~~~~~~~~p~l~i~G 191 (263)
. ...+.++++|+|+++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 247 (302)
T PRK00870 168 SQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFS 247 (302)
T ss_pred cccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEec
Confidence 0 0012456899999999
Q ss_pred CCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 192 ERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 192 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
++|+++|... +.+.+.++. .....+.++++++|.... +..+++.+.+.+||+++
T Consensus 248 ~~D~~~~~~~-~~~~~~~~~--~~~~~~~~i~~~gH~~~~----------e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 248 DSDPITGGGD-AILQKRIPG--AAGQPHPTIKGAGHFLQE----------DSGEELAEAVLEFIRAT 301 (302)
T ss_pred CCCCcccCch-HHHHhhccc--ccccceeeecCCCccchh----------hChHHHHHHHHHHHhcC
Confidence 9999999765 666666631 112347899999998754 33568889999999764
No 18
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.85 E-value=1.3e-19 Score=149.71 Aligned_cols=205 Identities=20% Similarity=0.288 Sum_probs=145.3
Q ss_pred CceEEeeCCeeEEEe--CCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhc
Q 024721 40 AGTVTELGGLKAYVT--GPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN 117 (263)
Q Consensus 40 ~~~~~~~~~~~~~~~--~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~ 117 (263)
.+.+...++.+.++. .+..+..++|++.||.+.....|..+++.|+.+||.|+++|+| |+|.+.. ...+ . .
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~R-GhG~S~r-~~rg---~--~ 83 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLR-GHGRSPR-GQRG---H--V 83 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCC-CCCCCCC-CCcC---C--c
Confidence 455666677555443 3333332444444445555568899999999999999999995 4443321 0000 0 1
Q ss_pred CCCccccccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhhcC--CCccEEEEecCCC---------------------
Q 024721 118 HTTDKGYEDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSN--------------------- 173 (263)
Q Consensus 118 ~~~~~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~--------------------- 173 (263)
..++.+..|+..+++.+.+. ...+++++||||||.+++.++.+ ++++++|+.+|..
T Consensus 84 ~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~ 163 (298)
T COG2267 84 DSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGR 163 (298)
T ss_pred hhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccc
Confidence 12567788999999988764 45699999999999999998733 4899998866543
Q ss_pred --------C----C-------------------------------------------hhhhhcccccEEEEecCCCCCCC
Q 024721 174 --------V----T-------------------------------------------EDEIKVVKVPIAVLGAERDNGLP 198 (263)
Q Consensus 174 --------~----~-------------------------------------------~~~~~~~~~p~l~i~G~~D~~~~ 198 (263)
. . ......+++|+|+++|++|.+++
T Consensus 164 ~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~ 243 (298)
T COG2267 164 IRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVD 243 (298)
T ss_pred cccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCcccc
Confidence 1 1 01244568999999999999999
Q ss_pred -hHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhh
Q 024721 199 -PAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 199 -~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
.+...++++.+.. .++++++++|+.|....+.+. .++++++.+.+||.+++..
T Consensus 244 ~~~~~~~~~~~~~~---~~~~~~~~~g~~He~~~E~~~-------~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 244 NVEGLARFFERAGS---PDKELKVIPGAYHELLNEPDR-------AREEVLKDILAWLAEALPS 297 (298)
T ss_pred CcHHHHHHHHhcCC---CCceEEecCCcchhhhcCcch-------HHHHHHHHHHHHHHhhccC
Confidence 6777777777632 257999999999988765432 2389999999999988754
No 19
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.85 E-value=2.9e-20 Score=138.11 Aligned_cols=142 Identities=27% Similarity=0.460 Sum_probs=113.4
Q ss_pred eEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh--cCC
Q 024721 62 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE--KGV 139 (263)
Q Consensus 62 ~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~--~~~ 139 (263)
+||++||+.+.. ..+..+++.|+++||.|+.+|++ +.+.. ....++..+++.+.. .+.
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~~-~~~~~------------------~~~~~~~~~~~~~~~~~~~~ 60 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDYP-GHGDS------------------DGADAVERVLADIRAGYPDP 60 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESCT-TSTTS------------------HHSHHHHHHHHHHHHHHCTC
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEecC-CCCcc------------------chhHHHHHHHHHHHhhcCCC
Confidence 478888877764 57899999999999999999995 33211 112466677776532 277
Q ss_pred CeEEEEEEeccHHHHHHhh-cCCCccEEEEecCCCCChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCcee
Q 024721 140 SAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVTEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHL 218 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~ 218 (263)
++++++|||+||.+++.++ .+++++++|++.|.. ....+.+.+.|+++++|++|+.++.+..+++++.++ .+.+
T Consensus 61 ~~i~l~G~S~Gg~~a~~~~~~~~~v~~~v~~~~~~-~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~----~~~~ 135 (145)
T PF12695_consen 61 DRIILIGHSMGGAIAANLAARNPRVKAVVLLSPYP-DSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP----GPKE 135 (145)
T ss_dssp CEEEEEEETHHHHHHHHHHHHSTTESEEEEESESS-GCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC----SSEE
T ss_pred CcEEEEEEccCcHHHHHHhhhccceeEEEEecCcc-chhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC----CCcE
Confidence 8999999999999999987 458999999999953 356788899999999999999999999999999984 2689
Q ss_pred EEEcCCCCcc
Q 024721 219 VKTYPGVCHG 228 (263)
Q Consensus 219 ~~~~~g~~H~ 228 (263)
+..++|++|+
T Consensus 136 ~~~i~g~~H~ 145 (145)
T PF12695_consen 136 LYIIPGAGHF 145 (145)
T ss_dssp EEEETTS-TT
T ss_pred EEEeCCCcCc
Confidence 9999999994
No 20
>PRK11460 putative hydrolase; Provisional
Probab=99.84 E-value=3.7e-19 Score=142.47 Aligned_cols=182 Identities=13% Similarity=0.111 Sum_probs=117.7
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcC--CCc-------cccccHHH
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNH--TTD-------KGYEDAKP 129 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~--~~~-------~~~~d~~~ 129 (263)
+.+.||++||..+. ...+..+++.|.+.++.+..++.+ |........ ...|+... +.+ .....+..
T Consensus 15 ~~~~vIlLHG~G~~-~~~~~~l~~~l~~~~~~~~~i~~~-g~~~~~~~~---g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 15 AQQLLLLFHGVGDN-PVAMGEIGSWFAPAFPDALVVSVG-GPEPSGNGA---GRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCcEEEEEeCCCCC-hHHHHHHHHHHHHHCCCCEEECCC-CCCCcCCCC---CcccccCCCCCccchHHHHHHHHHHHHH
Confidence 34567777765555 467889999998876544444432 110000000 01122111 111 11122333
Q ss_pred HHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCChhhhhcccccEEEEecCCCCCCChHHHHH
Q 024721 130 VIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTEDEIKVVKVPIAVLGAERDNGLPPAQMKR 204 (263)
Q Consensus 130 ~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~ 204 (263)
.++++.++ +.++|+++|||+||.+++.++ ..+ .+.+++++++.............|+|++||++|+++|.+..++
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~~~~~~~~pvli~hG~~D~vvp~~~~~~ 169 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLPETAPTATTIHLIHGGEDPVIDVAHAVA 169 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccccccccCCCcEEEEecCCCCccCHHHHHH
Confidence 44444333 456899999999999999977 445 4566777877643222333467899999999999999999999
Q ss_pred HHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 205 FDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 205 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
+.+.|+ +.+.+++++.|++++|.+. .+..+.+.+||++++.
T Consensus 170 ~~~~L~-~~g~~~~~~~~~~~gH~i~--------------~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 170 AQEALI-SLGGDVTLDIVEDLGHAID--------------PRLMQFALDRLRYTVP 210 (232)
T ss_pred HHHHHH-HCCCCeEEEEECCCCCCCC--------------HHHHHHHHHHHHHHcc
Confidence 999995 4566899999999999984 3667778888877764
No 21
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.83 E-value=7e-19 Score=145.10 Aligned_cols=180 Identities=15% Similarity=0.136 Sum_probs=121.2
Q ss_pred eeEEEeCCCCCCeeEEEEecccCCCchhhH---HHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccc
Q 024721 49 LKAYVTGPPHSKKAVLMISDIYGDEPPIYR---SVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYE 125 (263)
Q Consensus 49 ~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~---~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (263)
...++... +.+|+||++||+.+.. ..|. .....+.+.||.|+++|++ |.|.+....... .......+
T Consensus 20 ~~~~y~~~-g~~~~ivllHG~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~-G~G~S~~~~~~~-------~~~~~~~~ 89 (282)
T TIGR03343 20 FRIHYNEA-GNGEAVIMLHGGGPGA-GGWSNYYRNIGPFVDAGYRVILKDSP-GFNKSDAVVMDE-------QRGLVNAR 89 (282)
T ss_pred eeEEEEec-CCCCeEEEECCCCCch-hhHHHHHHHHHHHHhCCCEEEEECCC-CCCCCCCCcCcc-------cccchhHH
Confidence 44555443 3457899999865543 2332 3355677789999999995 443332110000 00011234
Q ss_pred cHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCC-----------------------------
Q 024721 126 DAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNV----------------------------- 174 (263)
Q Consensus 126 d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~----------------------------- 174 (263)
|+.++++.+ +.++++++||||||.+++.+|. .+ +++++|++.+...
T Consensus 90 ~l~~~l~~l---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (282)
T TIGR03343 90 AVKGLMDAL---DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLK 166 (282)
T ss_pred HHHHHHHHc---CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHH
Confidence 555544444 7789999999999999999884 44 8888888654210
Q ss_pred -------------C-----------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHH
Q 024721 175 -------------T-----------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFD 206 (263)
Q Consensus 175 -------------~-----------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~ 206 (263)
. ...++++++|+|+++|++|++++++..+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~ 246 (282)
T TIGR03343 167 QMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLL 246 (282)
T ss_pred HHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHH
Confidence 0 0013457899999999999999998888888
Q ss_pred HHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 207 EILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 207 ~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
+.++ +.++++++++||....+ ..+++.+.+.+||+
T Consensus 247 ~~~~-----~~~~~~i~~agH~~~~e----------~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 247 WNMP-----DAQLHVFSRCGHWAQWE----------HADAFNRLVIDFLR 281 (282)
T ss_pred HhCC-----CCEEEEeCCCCcCCccc----------CHHHHHHHHHHHhh
Confidence 7773 58899999999987543 35688889999986
No 22
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.83 E-value=3.1e-19 Score=146.93 Aligned_cols=186 Identities=15% Similarity=0.207 Sum_probs=129.9
Q ss_pred EEeeCCeeEEEeC-C-CCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC
Q 024721 43 VTELGGLKAYVTG-P-PHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 120 (263)
Q Consensus 43 ~~~~~~~~~~~~~-~-~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (263)
..++++.+..+.. . +..+++||++||..+.. ..|..+.+.|.+ +|.|+++|++ |.|.+... . ..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~-~~w~~~~~~L~~-~~~vi~~Dl~-G~G~S~~~-~-------~~~~~ 74 (276)
T TIGR02240 6 TIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANL-ELVFPFIEALDP-DLEVIAFDVP-GVGGSSTP-R-------HPYRF 74 (276)
T ss_pred EeccCCcEEEEEEecCCCCCCcEEEEeCCCcch-HHHHHHHHHhcc-CceEEEECCC-CCCCCCCC-C-------CcCcH
Confidence 3355665554432 2 22346899999866654 577888888865 6999999995 43332211 0 11334
Q ss_pred ccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCC------------------------
Q 024721 121 DKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNV------------------------ 174 (263)
Q Consensus 121 ~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~------------------------ 174 (263)
+.+.+|+.++++.+ +.+++.++||||||.+++.+|.+ + ++++++++++...
T Consensus 75 ~~~~~~~~~~i~~l---~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T TIGR02240 75 PGLAKLAARMLDYL---DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS 151 (276)
T ss_pred HHHHHHHHHHHHHh---CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc
Confidence 56667777777776 56789999999999999998843 2 6777777543210
Q ss_pred ----------------C-------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHH
Q 024721 175 ----------------T-------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDE 207 (263)
Q Consensus 175 ----------------~-------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~ 207 (263)
. ...+.++++|+|+++|++|+++|++..+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~ 231 (276)
T TIGR02240 152 HGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAW 231 (276)
T ss_pred cccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHH
Confidence 0 01245778999999999999999998888887
Q ss_pred HHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 208 ILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 208 ~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
.++ +.+++++++ ||....+ ..+++.+.+.+|+++.
T Consensus 232 ~~~-----~~~~~~i~~-gH~~~~e----------~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 232 RIP-----NAELHIIDD-GHLFLIT----------RAEAVAPIIMKFLAEE 266 (276)
T ss_pred hCC-----CCEEEEEcC-CCchhhc----------cHHHHHHHHHHHHHHh
Confidence 773 467788885 9976542 3568899999999865
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.83 E-value=7.9e-19 Score=144.16 Aligned_cols=188 Identities=20% Similarity=0.260 Sum_probs=129.9
Q ss_pred ceEEeeCCeeEEEeCCCC-CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCC
Q 024721 41 GTVTELGGLKAYVTGPPH-SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 119 (263)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~-~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~ 119 (263)
....++++++.++...+. .+++||++||..+.. ..|..+.+.|++ +|.|+++|++ |.|.+..... ..++
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~-G~G~S~~~~~-------~~~~ 77 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGAST-HSWRDLMPPLAR-SFRVVAPDLP-GHGFTRAPFR-------FRFT 77 (278)
T ss_pred cceeeECCEEEEEEecCCCCCCeEEEEcCCCCCH-HHHHHHHHHHhh-CcEEEeecCC-CCCCCCCccc-------cCCC
Confidence 345577888877654432 357889999876664 567888888875 6999999996 4332211110 1123
Q ss_pred CccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCCC----------------------
Q 024721 120 TDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNVT---------------------- 175 (263)
Q Consensus 120 ~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~~---------------------- 175 (263)
.+...+|+.++++.+ +.++++++||||||.+++.+|.. + ++++++++.+....
T Consensus 78 ~~~~~~~l~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (278)
T TIGR03056 78 LPSMAEDLSALCAAE---GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFT 154 (278)
T ss_pred HHHHHHHHHHHHHHc---CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccc
Confidence 345556666655543 55689999999999999998833 3 57777766532100
Q ss_pred ----------------------------------------------------------hhhhhcccccEEEEecCCCCCC
Q 024721 176 ----------------------------------------------------------EDEIKVVKVPIAVLGAERDNGL 197 (263)
Q Consensus 176 ----------------------------------------------------------~~~~~~~~~p~l~i~G~~D~~~ 197 (263)
...++++++|+|+++|++|.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~v 234 (278)
T TIGR03056 155 PPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAV 234 (278)
T ss_pred hHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCccc
Confidence 0012346789999999999999
Q ss_pred ChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 198 PPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 198 ~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
|.+..+.+.+.++ +.++..++++||.+..+ ..+++.+.+.+||+
T Consensus 235 p~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 235 PPDESKRAATRVP-----TATLHVVPGGGHLVHEE----------QADGVVGLILQAAE 278 (278)
T ss_pred CHHHHHHHHHhcc-----CCeEEEECCCCCccccc----------CHHHHHHHHHHHhC
Confidence 9988888877763 46889999999987643 35678888888874
No 24
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.83 E-value=8.6e-19 Score=145.69 Aligned_cols=189 Identities=16% Similarity=0.220 Sum_probs=132.1
Q ss_pred eEEeeCCeeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCc
Q 024721 42 TVTELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTD 121 (263)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 121 (263)
...+.+|.+.++.... .+++||++||..+.. ..|..+++.|++.+ .|+++|++ |.|.+.... . .++.+
T Consensus 10 ~~~~~~g~~i~y~~~G-~g~~vvllHG~~~~~-~~w~~~~~~L~~~~-~via~D~~-G~G~S~~~~-~-------~~~~~ 77 (295)
T PRK03592 10 RRVEVLGSRMAYIETG-EGDPIVFLHGNPTSS-YLWRNIIPHLAGLG-RCLAPDLI-GMGASDKPD-I-------DYTFA 77 (295)
T ss_pred eEEEECCEEEEEEEeC-CCCEEEEECCCCCCH-HHHHHHHHHHhhCC-EEEEEcCC-CCCCCCCCC-C-------CCCHH
Confidence 4456788777765433 457899999877665 57888999998875 99999996 443332211 0 13345
Q ss_pred cccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC-------C-----------------
Q 024721 122 KGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV-------T----------------- 175 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~-------~----------------- 175 (263)
...+|+..+++.+ +.+++.++|||+||.+++.+| ..| ++++++++.+... .
T Consensus 78 ~~a~dl~~ll~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (295)
T PRK03592 78 DHARYLDAWFDAL---GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGE 154 (295)
T ss_pred HHHHHHHHHHHHh---CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccccc
Confidence 5566777766665 667999999999999999988 334 7888888664110 0
Q ss_pred -----------------------h-------------------------------------------hhhhcccccEEEE
Q 024721 176 -----------------------E-------------------------------------------DEIKVVKVPIAVL 189 (263)
Q Consensus 176 -----------------------~-------------------------------------------~~~~~~~~p~l~i 189 (263)
. ..+.++++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 234 (295)
T PRK03592 155 EMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLI 234 (295)
T ss_pred ccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEE
Confidence 0 0013468899999
Q ss_pred ecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHh
Q 024721 190 GAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 190 ~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l 259 (263)
+|++|.++++....++...+.. +.++++++++||....+ ..+++.+.+.+||++..
T Consensus 235 ~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e----------~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 235 NAEPGAILTTGAIRDWCRSWPN----QLEITVFGAGLHFAQED----------SPEEIGAAIAAWLRRLR 290 (295)
T ss_pred eccCCcccCcHHHHHHHHHhhh----hcceeeccCcchhhhhc----------CHHHHHHHHHHHHHHhc
Confidence 9999999965555555444312 47788999999977642 35788999999998754
No 25
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.83 E-value=1.5e-18 Score=142.62 Aligned_cols=185 Identities=18% Similarity=0.178 Sum_probs=132.3
Q ss_pred eeEEEeCCCC-CCeeEEEEecccCCC---chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccc
Q 024721 49 LKAYVTGPPH-SKKAVLMISDIYGDE---PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGY 124 (263)
Q Consensus 49 ~~~~~~~~~~-~~~~vv~~h~~~g~~---~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (263)
+.+++..|.+ .++++|++||+.+.. ...+..+++.|+++||.|+++|++ |.+.+.... .+.+...
T Consensus 14 l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~-G~G~S~~~~----------~~~~~~~ 82 (274)
T TIGR03100 14 LVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYR-GMGDSEGEN----------LGFEGID 82 (274)
T ss_pred EEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCC-CCCCCCCCC----------CCHHHHH
Confidence 7788887764 356899999876532 223567899999999999999995 444322110 1234566
Q ss_pred ccHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhhc-CCCccEEEEecCCCCC--------------------------
Q 024721 125 EDAKPVIAALKEK--GVSAVGAAGFCWGGKVAVKLAS-NQDVQAAVLLHPSNVT-------------------------- 175 (263)
Q Consensus 125 ~d~~~~~~~l~~~--~~~~i~~~G~S~Gg~~a~~~a~-~~~i~~~v~~~~~~~~-------------------------- 175 (263)
+|+.++++++++. +.++++++|||+||.+++.+|. +++++++|+++|....
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFWRKL 162 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHHHHh
Confidence 8999999999865 4578999999999999999874 4689999998876420
Q ss_pred -------------------------------------hhhhhcccccEEEEecCCCCCCChHHH------HHHHHHHHcC
Q 024721 176 -------------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQM------KRFDEILYAK 212 (263)
Q Consensus 176 -------------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~------~~~~~~l~~~ 212 (263)
...+..+++|+|+++|++|...+ ... ..+.+.+..
T Consensus 163 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~- 240 (274)
T TIGR03100 163 LSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALED- 240 (274)
T ss_pred cCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhc-
Confidence 01123567899999999998753 221 233333421
Q ss_pred CCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 213 PKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 213 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
.++++..+++++|.++.+ ...+++.+.+.+||++
T Consensus 241 --~~v~~~~~~~~~H~l~~e---------~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 241 --PGIERVEIDGADHTFSDR---------VWREWVAARTTEWLRR 274 (274)
T ss_pred --CCeEEEecCCCCcccccH---------HHHHHHHHHHHHHHhC
Confidence 268899999999966443 4468999999999963
No 26
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.82 E-value=4.6e-19 Score=144.03 Aligned_cols=170 Identities=12% Similarity=0.176 Sum_probs=124.2
Q ss_pred CCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 58 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
..+|+||++||..+.. ..|..+++.|++ +|.|+++|++ |.|.+... ...+.++..+|+.++++.+
T Consensus 14 ~~~~~iv~lhG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~-G~G~s~~~---------~~~~~~~~~~d~~~~l~~l--- 78 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL-DNLGVLARDLVN-DHDIIQVDMR-NHGLSPRD---------PVMNYPAMAQDLLDTLDAL--- 78 (255)
T ss_pred CCCCCEEEECCCCCch-hHHHHHHHHHhh-CCeEEEECCC-CCCCCCCC---------CCCCHHHHHHHHHHHHHHc---
Confidence 3467899999987765 577888888875 6999999996 43322211 1134456667777777765
Q ss_pred CCCeEEEEEEeccHHHHHHhhcC--CCccEEEEecCCCC-----------------------C-----------------
Q 024721 138 GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSNV-----------------------T----------------- 175 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~~-----------------------~----------------- 175 (263)
+.+++.++||||||.+++.+|.. .++++++++.+... .
T Consensus 79 ~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (255)
T PRK10673 79 QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGV 158 (255)
T ss_pred CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHH
Confidence 55689999999999999998843 37999988643210 0
Q ss_pred ----------------h-------------hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCC
Q 024721 176 ----------------E-------------DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVC 226 (263)
Q Consensus 176 ----------------~-------------~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 226 (263)
. ..++++++|+|+++|++|+.++.+..+.+.+.++ +.++.++++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~g 233 (255)
T PRK10673 159 IQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP-----QARAHVIAGAG 233 (255)
T ss_pred HHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC-----CcEEEEeCCCC
Confidence 0 0123456899999999999999888887877763 57889999999
Q ss_pred ccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 227 HGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 227 H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
|....+ ..+++.+.+.+||++
T Consensus 234 H~~~~~----------~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 234 HWVHAE----------KPDAVLRAIRRYLND 254 (255)
T ss_pred Ceeecc----------CHHHHHHHHHHHHhc
Confidence 976542 356788999999875
No 27
>PRK06489 hypothetical protein; Provisional
Probab=99.82 E-value=1.8e-18 Score=147.64 Aligned_cols=195 Identities=17% Similarity=0.172 Sum_probs=120.9
Q ss_pred eeCCeeEEEeCCCC-C-------CeeEEEEecccCCCchhh-HHHHHHHH-------hCCCEEEeecCCCCCCCCCCCCC
Q 024721 45 ELGGLKAYVTGPPH-S-------KKAVLMISDIYGDEPPIY-RSVADKVA-------GAGFLVVAPDFFHGDAANPSNPK 108 (263)
Q Consensus 45 ~~~~~~~~~~~~~~-~-------~~~vv~~h~~~g~~~~~~-~~~~~~l~-------~~G~~vv~~d~~~g~~~~~~~~~ 108 (263)
+.+|++.++...++ . +|+||++||+.++...++ ..+.+.|. .++|.|+++|++ |.|.+....
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~-GhG~S~~p~- 123 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGI-GHGKSSKPS- 123 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCC-CCCCCCCCC-
Confidence 45667766654332 2 578999999887653332 24555542 457999999996 433222111
Q ss_pred cchhhhhhcCCCccccccHHHHHHHH-HhcCCCeEE-EEEEeccHHHHHHhh-cCC-CccEEEEecCCC-----------
Q 024721 109 YDKDTWRKNHTTDKGYEDAKPVIAAL-KEKGVSAVG-AAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSN----------- 173 (263)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~~~~~l-~~~~~~~i~-~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~----------- 173 (263)
.........++.+..++|+.. .+ ...+.+++. ++||||||.+++.+| ..| +++++|++.+..
T Consensus 124 ~~~~~~~~~~~~~~~a~~~~~---~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~ 200 (360)
T PRK06489 124 DGLRAAFPRYDYDDMVEAQYR---LVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWR 200 (360)
T ss_pred cCCCCCCCcccHHHHHHHHHH---HHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHH
Confidence 000000001222233333333 23 223666775 899999999999988 334 778877654310
Q ss_pred -----------------------------------------------CC-------------------------------
Q 024721 174 -----------------------------------------------VT------------------------------- 175 (263)
Q Consensus 174 -----------------------------------------------~~------------------------------- 175 (263)
..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
T PRK06489 201 RMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSR 280 (360)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhh
Confidence 00
Q ss_pred ----hhhhhcccccEEEEecCCCCCCChHHH--HHHHHHHHcCCCCceeEEEcCCC----CccccccCCCCChhhhhHHH
Q 024721 176 ----EDEIKVVKVPIAVLGAERDNGLPPAQM--KRFDEILYAKPKFDHLVKTYPGV----CHGWTVRYFVNDTFAVNSAA 245 (263)
Q Consensus 176 ----~~~~~~~~~p~l~i~G~~D~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~g~----~H~~~~~~~~~~~~~~~~~~ 245 (263)
...+.++++|+|+++|++|.++|++.. +.+.+.++ +.+++++|++ ||... . ..+
T Consensus 281 ~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-----~a~l~~i~~a~~~~GH~~~-e----------~P~ 344 (360)
T PRK06489 281 DYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-----HGRLVLIPASPETRGHGTT-G----------SAK 344 (360)
T ss_pred ccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-----CCeEEEECCCCCCCCcccc-c----------CHH
Confidence 011345789999999999999998765 56666663 4789999986 99764 2 146
Q ss_pred HHHHHHHHHHHHHhh
Q 024721 246 EAHEDMINWFEKHVK 260 (263)
Q Consensus 246 ~~~~~~~~fl~~~l~ 260 (263)
++.+.+.+||++.-+
T Consensus 345 ~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 345 FWKAYLAEFLAQVPK 359 (360)
T ss_pred HHHHHHHHHHHhccc
Confidence 888899999986543
No 28
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.81 E-value=1.1e-18 Score=141.26 Aligned_cols=170 Identities=18% Similarity=0.271 Sum_probs=118.8
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKG 138 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 138 (263)
++|+||++||+.+.. ..|..+.+.|. +||.|+++|++ |.|.+..... ..++.++..+|+..+++.+ +
T Consensus 12 ~~~~iv~lhG~~~~~-~~~~~~~~~l~-~~~~vi~~D~~-G~G~S~~~~~-------~~~~~~~~~~~~~~~i~~~---~ 78 (257)
T TIGR03611 12 DAPVVVLSSGLGGSG-SYWAPQLDVLT-QRFHVVTYDHR-GTGRSPGELP-------PGYSIAHMADDVLQLLDAL---N 78 (257)
T ss_pred CCCEEEEEcCCCcch-hHHHHHHHHHH-hccEEEEEcCC-CCCCCCCCCc-------ccCCHHHHHHHHHHHHHHh---C
Confidence 456788888876654 57777887776 47999999995 4332221111 1123344455565555544 6
Q ss_pred CCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCCC-----------------------------------------
Q 024721 139 VSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNVT----------------------------------------- 175 (263)
Q Consensus 139 ~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~~----------------------------------------- 175 (263)
..++.++||||||.+++.++. .+ .++++|++.+....
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENA 158 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccc
Confidence 678999999999999999873 33 67777766542100
Q ss_pred --------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcC
Q 024721 176 --------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYP 223 (263)
Q Consensus 176 --------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 223 (263)
...+..+++|+|+++|++|..+|.+..+.+.+.++ +.+++.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~ 233 (257)
T TIGR03611 159 ARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP-----NAQLKLLP 233 (257)
T ss_pred hhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC-----CceEEEEC
Confidence 01234578999999999999999998888888763 46788899
Q ss_pred CCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 224 GVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 224 g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
++||.+..+ ..+++.+.+.+||+
T Consensus 234 ~~gH~~~~~----------~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 234 YGGHASNVT----------DPETFNRALLDFLK 256 (257)
T ss_pred CCCCCcccc----------CHHHHHHHHHHHhc
Confidence 999987542 24678888999986
No 29
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.81 E-value=2.6e-18 Score=146.57 Aligned_cols=189 Identities=20% Similarity=0.185 Sum_probs=124.0
Q ss_pred eeCCe-eEEEeCCCC-----CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcC
Q 024721 45 ELGGL-KAYVTGPPH-----SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNH 118 (263)
Q Consensus 45 ~~~~~-~~~~~~~~~-----~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~ 118 (263)
.+++. +.++...+. .+|+||++||+.+.. ..|..+.+.|++ +|.|+++|++ |.|.+...... .+
T Consensus 67 ~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~-~~w~~~~~~L~~-~~~via~Dl~-G~G~S~~~~~~-------~~ 136 (360)
T PLN02679 67 KWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASI-PHWRRNIGVLAK-NYTVYAIDLL-GFGASDKPPGF-------SY 136 (360)
T ss_pred EECCceeEEEEEecCcccCCCCCeEEEECCCCCCH-HHHHHHHHHHhc-CCEEEEECCC-CCCCCCCCCCc-------cc
Confidence 34443 655553221 237889999876654 577888888876 7999999995 44332211100 12
Q ss_pred CCccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc--CC-CccEEEEecCCCC---------------------
Q 024721 119 TTDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS--NQ-DVQAAVLLHPSNV--------------------- 174 (263)
Q Consensus 119 ~~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~--~~-~i~~~v~~~~~~~--------------------- 174 (263)
+.+...+++.++++.+ +.+++.++||||||.+++.++. .| +++++|++++...
T Consensus 137 ~~~~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (360)
T PLN02679 137 TMETWAELILDFLEEV---VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWL 213 (360)
T ss_pred cHHHHHHHHHHHHHHh---cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHH
Confidence 3344555666665544 6679999999999999998763 33 7888887653210
Q ss_pred --------------------------------------C--------------------------------hhhhhcccc
Q 024721 175 --------------------------------------T--------------------------------EDEIKVVKV 184 (263)
Q Consensus 175 --------------------------------------~--------------------------------~~~~~~~~~ 184 (263)
. ...+.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 293 (360)
T PLN02679 214 IDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISL 293 (360)
T ss_pred HHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCC
Confidence 0 011345678
Q ss_pred cEEEEecCCCCCCChHHH-HHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 185 PIAVLGAERDNGLPPAQM-KRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 185 p~l~i~G~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
|+|+++|++|+++|.+.. ..+.+.+.. .-.+.++++++++||.... +..+++.+.+.+||++
T Consensus 294 PtLii~G~~D~~~p~~~~~~~~~~~l~~-~ip~~~l~~i~~aGH~~~~----------E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 294 PILVLWGDQDPFTPLDGPVGKYFSSLPS-QLPNVTLYVLEGVGHCPHD----------DRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CEEEEEeCCCCCcCchhhHHHHHHhhhc-cCCceEEEEcCCCCCCccc----------cCHHHHHHHHHHHHHh
Confidence 999999999999987632 223333322 1126889999999997654 3367899999999985
No 30
>PLN02965 Probable pheophorbidase
Probab=99.81 E-value=1.4e-18 Score=141.37 Aligned_cols=169 Identities=12% Similarity=0.126 Sum_probs=121.5
Q ss_pred eEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCC-C
Q 024721 62 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGV-S 140 (263)
Q Consensus 62 ~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~ 140 (263)
.||++||++... ..|..+.+.|.+.||.|+++|++ |.|.+..... ..++.+.+.+|+.++++.+ +. +
T Consensus 5 ~vvllHG~~~~~-~~w~~~~~~L~~~~~~via~Dl~-G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l---~~~~ 72 (255)
T PLN02965 5 HFVFVHGASHGA-WCWYKLATLLDAAGFKSTCVDLT-GAGISLTDSN-------TVSSSDQYNRPLFALLSDL---PPDH 72 (255)
T ss_pred EEEEECCCCCCc-CcHHHHHHHHhhCCceEEEecCC-cCCCCCCCcc-------ccCCHHHHHHHHHHHHHhc---CCCC
Confidence 488888887664 57889999998889999999995 4443321110 0123455566777777665 44 4
Q ss_pred eEEEEEEeccHHHHHHhhcC--CCccEEEEecCCC-----------------------------C--C-------h----
Q 024721 141 AVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSN-----------------------------V--T-------E---- 176 (263)
Q Consensus 141 ~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~-----------------------------~--~-------~---- 176 (263)
++.++||||||.+++.+|.. ++++++|++.+.. . . .
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHH
Confidence 89999999999999998843 4788877765320 0 0 0
Q ss_pred ----------------------------------hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEc
Q 024721 177 ----------------------------------DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTY 222 (263)
Q Consensus 177 ----------------------------------~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 222 (263)
..+..+++|+|+++|++|..+|++..+.+.+.++ +.+++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-----~a~~~~i 227 (255)
T PLN02965 153 HYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP-----PAQTYVL 227 (255)
T ss_pred HHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-----cceEEEe
Confidence 0112478999999999999999988888888773 4678999
Q ss_pred CCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 223 PGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 223 ~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
+++||....+ ..+++.+.+.+|++.
T Consensus 228 ~~~GH~~~~e----------~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 228 EDSDHSAFFS----------VPTTLFQYLLQAVSS 252 (255)
T ss_pred cCCCCchhhc----------CHHHHHHHHHHHHHH
Confidence 9999988653 356788888888764
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.81 E-value=3.6e-18 Score=140.35 Aligned_cols=174 Identities=17% Similarity=0.232 Sum_probs=117.4
Q ss_pred CCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 58 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
+.+++||++||+++....++..+...+.+.||.|+++|++ |.+.+....... ...+.+...+|+..+++.+
T Consensus 23 ~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~-G~G~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~--- 93 (288)
T TIGR01250 23 GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQL-GCGYSDQPDDSD-----ELWTIDYFVDELEEVREKL--- 93 (288)
T ss_pred CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCC-CCCCCCCCCccc-----ccccHHHHHHHHHHHHHHc---
Confidence 3457899999988876556677777777669999999996 433221110000 0122344455555555443
Q ss_pred CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC----------------------------------------
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT---------------------------------------- 175 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~---------------------------------------- 175 (263)
+.++++++|||+||.+++.+| ..+ +++++++..+....
T Consensus 94 ~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (288)
T TIGR01250 94 GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAV 173 (288)
T ss_pred CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHH
Confidence 566799999999999999987 333 78888875542100
Q ss_pred --------------------------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHH
Q 024721 176 --------------------------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRF 205 (263)
Q Consensus 176 --------------------------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~ 205 (263)
...+.++++|+|+++|++|.+ +++..+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~ 252 (288)
T TIGR01250 174 EVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREM 252 (288)
T ss_pred HHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHH
Confidence 001235689999999999985 56777777
Q ss_pred HHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 206 DEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 206 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
.+.++ +.+++.++++||....+ ..+++.+.+.+||+
T Consensus 253 ~~~~~-----~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 253 QELIA-----GSRLVVFPDGSHMTMIE----------DPEVYFKLLSDFIR 288 (288)
T ss_pred HHhcc-----CCeEEEeCCCCCCcccC----------CHHHHHHHHHHHhC
Confidence 76663 46788999999977653 24678888888874
No 32
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.81 E-value=5.2e-18 Score=137.07 Aligned_cols=194 Identities=18% Similarity=0.209 Sum_probs=138.5
Q ss_pred CceEEeeCCeeEEEeCCCC-CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCC-CCCCCCCCCCCcchhhhhhc
Q 024721 40 AGTVTELGGLKAYVTGPPH-SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKN 117 (263)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~-~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~ 117 (263)
...+.++++++..+..... .+|.|+++||.... +..|+.....|+++||+|+++|+| .|.+..+.. ...
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~-wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~--------~~~ 93 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPES-WYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPH--------ISE 93 (322)
T ss_pred ceeeEEEccEEEEEEeecCCCCCEEEEEccCCcc-chhhhhhhhhhhhcceEEEecCCCCCCCCCCCCC--------cce
Confidence 4456678888887765433 45666666665555 457888999999999999999996 344333221 123
Q ss_pred CCCccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhh--cCCCccEEEEecCCCCC--------------------
Q 024721 118 HTTDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLA--SNQDVQAAVLLHPSNVT-------------------- 175 (263)
Q Consensus 118 ~~~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a--~~~~i~~~v~~~~~~~~-------------------- 175 (263)
++......|+..+++.+ +.++++++||+||+.+++.++ ..+++++.|..+.....
T Consensus 94 Yt~~~l~~di~~lld~L---g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~ 170 (322)
T KOG4178|consen 94 YTIDELVGDIVALLDHL---GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYIC 170 (322)
T ss_pred eeHHHHHHHHHHHHHHh---ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeE
Confidence 55567778888888888 578999999999999999988 33488888885422100
Q ss_pred --------------------------------------------------------------------------------
Q 024721 176 -------------------------------------------------------------------------------- 175 (263)
Q Consensus 176 -------------------------------------------------------------------------------- 175 (263)
T Consensus 171 ~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~ 250 (322)
T KOG4178|consen 171 LFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAA 250 (322)
T ss_pred eccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhc
Confidence
Q ss_pred hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHH
Q 024721 176 EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWF 255 (263)
Q Consensus 176 ~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 255 (263)
+..+.++++|+++++|++|.+.+.......+++.-.. ..+.++++|+||....+ ..+++.+.+.+||
T Consensus 251 ~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~---l~~~vv~~~~gH~vqqe----------~p~~v~~~i~~f~ 317 (322)
T KOG4178|consen 251 PWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR---LTERVVIEGIGHFVQQE----------KPQEVNQAILGFI 317 (322)
T ss_pred cccccccccceEEEEecCcccccchhHHHHHHHhhcc---ccceEEecCCccccccc----------CHHHHHHHHHHHH
Confidence 1124567899999999999998766444444443121 34688999999977553 3579999999999
Q ss_pred HHH
Q 024721 256 EKH 258 (263)
Q Consensus 256 ~~~ 258 (263)
++.
T Consensus 318 ~~~ 320 (322)
T KOG4178|consen 318 NSF 320 (322)
T ss_pred Hhh
Confidence 975
No 33
>PLN02578 hydrolase
Probab=99.80 E-value=7.6e-18 Score=143.44 Aligned_cols=182 Identities=14% Similarity=0.144 Sum_probs=124.4
Q ss_pred EeeCCeeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccc
Q 024721 44 TELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG 123 (263)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 123 (263)
.+..+.+..+...+ ++++||++||..+.. ..|..+.+.|++ +|.|+++|++ |.|.+.... ..++.+..
T Consensus 71 ~~~~~~~i~Y~~~g-~g~~vvliHG~~~~~-~~w~~~~~~l~~-~~~v~~~D~~-G~G~S~~~~--------~~~~~~~~ 138 (354)
T PLN02578 71 WTWRGHKIHYVVQG-EGLPIVLIHGFGASA-FHWRYNIPELAK-KYKVYALDLL-GFGWSDKAL--------IEYDAMVW 138 (354)
T ss_pred EEECCEEEEEEEcC-CCCeEEEECCCCCCH-HHHHHHHHHHhc-CCEEEEECCC-CCCCCCCcc--------cccCHHHH
Confidence 35567666555433 557889998866653 567788888875 5999999995 444322110 11223334
Q ss_pred cccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCC---------------------------
Q 024721 124 YEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNV--------------------------- 174 (263)
Q Consensus 124 ~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~--------------------------- 174 (263)
.+|+..+++.+ ..+++.++|||+||.+++.+|.. + ++++++++.+...
T Consensus 139 a~~l~~~i~~~---~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (354)
T PLN02578 139 RDQVADFVKEV---VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPL 215 (354)
T ss_pred HHHHHHHHHHh---ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHH
Confidence 45555555544 55789999999999999998843 3 7888887643210
Q ss_pred -------------------------------C-----------------------------------------hhhhhcc
Q 024721 175 -------------------------------T-----------------------------------------EDEIKVV 182 (263)
Q Consensus 175 -------------------------------~-----------------------------------------~~~~~~~ 182 (263)
. .+.+.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 295 (354)
T PLN02578 216 KEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKL 295 (354)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcC
Confidence 0 0012446
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
++|+|+++|++|.++|.+..+.+.+.++ +.++++++ +||.... +..+++.+.+.+||+
T Consensus 296 ~~PvLiI~G~~D~~v~~~~~~~l~~~~p-----~a~l~~i~-~GH~~~~----------e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 296 SCPLLLLWGDLDPWVGPAKAEKIKAFYP-----DTTLVNLQ-AGHCPHD----------EVPEQVNKALLEWLS 353 (354)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCEEEEeC-CCCCccc----------cCHHHHHHHHHHHHh
Confidence 8999999999999999998888887763 45677775 7997754 335788899999986
No 34
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.80 E-value=3.8e-18 Score=143.81 Aligned_cols=161 Identities=17% Similarity=0.226 Sum_probs=113.2
Q ss_pred HHHHHHHHhCCCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh-------------------c
Q 024721 78 RSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE-------------------K 137 (263)
Q Consensus 78 ~~~~~~l~~~G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~-------------------~ 137 (263)
..+++.|+++||.|+++|++ +|.+...... .. . -.+++..++|+..+++.+.+ .
T Consensus 64 ~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~-~g---~--~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (332)
T TIGR01607 64 DSWIENFNKNGYSVYGLDLQGHGESDGLQNL-RG---H--INCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNT 137 (332)
T ss_pred HHHHHHHHHCCCcEEEecccccCCCcccccc-cc---c--hhhHHHHHHHHHHHHHHhhhhhcccccccccccccccccc
Confidence 46899999999999999996 3432211100 00 0 02346677888888887754 1
Q ss_pred -C-CCeEEEEEEeccHHHHHHhhc-C---------CCccEEEEecCCC--------------------------------
Q 024721 138 -G-VSAVGAAGFCWGGKVAVKLAS-N---------QDVQAAVLLHPSN-------------------------------- 173 (263)
Q Consensus 138 -~-~~~i~~~G~S~Gg~~a~~~a~-~---------~~i~~~v~~~~~~-------------------------------- 173 (263)
. ..+++++||||||.+++.++. . ..++++|+.+|..
T Consensus 138 ~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 217 (332)
T TIGR01607 138 KENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFR 217 (332)
T ss_pred ccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCccc
Confidence 1 358999999999999998762 1 1577877655420
Q ss_pred --C-C--------------------------------------hhhhhcc--cccEEEEecCCCCCCChHHHHHHHHHHH
Q 024721 174 --V-T--------------------------------------EDEIKVV--KVPIAVLGAERDNGLPPAQMKRFDEILY 210 (263)
Q Consensus 174 --~-~--------------------------------------~~~~~~~--~~p~l~i~G~~D~~~~~~~~~~~~~~l~ 210 (263)
. . ...+..+ ++|+|+++|++|++++.+..+.+++.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~ 297 (332)
T TIGR01607 218 ISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLS 297 (332)
T ss_pred ccCccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhcc
Confidence 0 0 0123344 6899999999999999998888877763
Q ss_pred cCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 211 AKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 211 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
. .++++.++++++|....+. ..+++.+.+.+||+
T Consensus 298 ~---~~~~l~~~~g~~H~i~~E~---------~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 298 I---SNKELHTLEDMDHVITIEP---------GNEEVLKKIIEWIS 331 (332)
T ss_pred C---CCcEEEEECCCCCCCccCC---------CHHHHHHHHHHHhh
Confidence 2 2578999999999886542 24789999999986
No 35
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.80 E-value=4.9e-18 Score=138.22 Aligned_cols=162 Identities=15% Similarity=0.169 Sum_probs=113.6
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCCC
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGVS 140 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 140 (263)
|+||++||+.+.. ..|..+.+.|.+ .|.|+++|++ |.|.+.... .+ .+...++.+.+...+
T Consensus 14 ~~ivllHG~~~~~-~~w~~~~~~L~~-~~~vi~~Dl~-G~G~S~~~~---------~~-------~~~~~~~~l~~~~~~ 74 (256)
T PRK10349 14 VHLVLLHGWGLNA-EVWRCIDEELSS-HFTLHLVDLP-GFGRSRGFG---------AL-------SLADMAEAVLQQAPD 74 (256)
T ss_pred CeEEEECCCCCCh-hHHHHHHHHHhc-CCEEEEecCC-CCCCCCCCC---------CC-------CHHHHHHHHHhcCCC
Confidence 4699999865554 578889999975 4999999995 443322100 01 122333334444567
Q ss_pred eEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCC-----------------------------------------C--
Q 024721 141 AVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNV-----------------------------------------T-- 175 (263)
Q Consensus 141 ~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~-----------------------------------------~-- 175 (263)
++.++||||||.+++.+|.. + ++++++++.+... .
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETA 154 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchH
Confidence 89999999999999998843 3 8888888754210 0
Q ss_pred ----------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEE
Q 024721 176 ----------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKT 221 (263)
Q Consensus 176 ----------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 221 (263)
...+.++++|+|+++|++|.++|.+..+.+.+.++ +.++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-----~~~~~~ 229 (256)
T PRK10349 155 RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-----HSESYI 229 (256)
T ss_pred HHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC-----CCeEEE
Confidence 01245678999999999999999888777766663 578999
Q ss_pred cCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 222 YPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 222 ~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
+|++||....+ ..+++.+.+.+|-+
T Consensus 230 i~~~gH~~~~e----------~p~~f~~~l~~~~~ 254 (256)
T PRK10349 230 FAKAAHAPFIS----------HPAEFCHLLVALKQ 254 (256)
T ss_pred eCCCCCCcccc----------CHHHHHHHHHHHhc
Confidence 99999977653 34677777777643
No 36
>PRK10162 acetyl esterase; Provisional
Probab=99.79 E-value=1.8e-17 Score=138.89 Aligned_cols=188 Identities=19% Similarity=0.179 Sum_probs=136.8
Q ss_pred eeEEEeCCCC-CCeeEEEEecccC--CCchhhHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccc
Q 024721 49 LKAYVTGPPH-SKKAVLMISDIYG--DEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGY 124 (263)
Q Consensus 49 ~~~~~~~~~~-~~~~vv~~h~~~g--~~~~~~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (263)
+++.++.|.. ..|.||++|||.- .+...+..+++.|++. |+.|+.+||| ..+. .++....
T Consensus 69 i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYr-lape---------------~~~p~~~ 132 (318)
T PRK10162 69 VETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYT-LSPE---------------ARFPQAI 132 (318)
T ss_pred eEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCC-CCCC---------------CCCCCcH
Confidence 7788887754 3467888887642 2223566788888874 9999999995 2210 1223456
Q ss_pred ccHHHHHHHHHhc------CCCeEEEEEEeccHHHHHHhhc---C-----CCccEEEEecCCCCCh--------------
Q 024721 125 EDAKPVIAALKEK------GVSAVGAAGFCWGGKVAVKLAS---N-----QDVQAAVLLHPSNVTE-------------- 176 (263)
Q Consensus 125 ~d~~~~~~~l~~~------~~~~i~~~G~S~Gg~~a~~~a~---~-----~~i~~~v~~~~~~~~~-------------- 176 (263)
+|+.++++|+.++ +.++|+++|+|+||.+++.++. + ..++++++++|.....
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~~ 212 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVWDG 212 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCccc
Confidence 8999999998753 4579999999999999999772 1 3688999988753110
Q ss_pred --------------------h-h-----hhcc---cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCc
Q 024721 177 --------------------D-E-----IKVV---KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCH 227 (263)
Q Consensus 177 --------------------~-~-----~~~~---~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 227 (263)
. . ...+ -.|+++++|+.|++.+ +.+.+.++| .+.|.++++++++|..|
T Consensus 213 l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L-~~aGv~v~~~~~~g~~H 289 (318)
T PRK10162 213 LTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTL-AAHQQPCEFKLYPGTLH 289 (318)
T ss_pred cCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHH-HHcCCCEEEEEECCCce
Confidence 0 0 0112 2599999999999864 577899999 45678999999999999
Q ss_pred cccccCCCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 228 GWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
+|....... +...++++.+.+||+++++
T Consensus 290 ~f~~~~~~~-----~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 290 AFLHYSRMM-----DTADDALRDGAQFFTAQLK 317 (318)
T ss_pred ehhhccCch-----HHHHHHHHHHHHHHHHHhc
Confidence 996543221 4577899999999999875
No 37
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.78 E-value=9.4e-18 Score=139.58 Aligned_cols=193 Identities=19% Similarity=0.225 Sum_probs=122.6
Q ss_pred eeCC--eeEEEeCCC-CC--CeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCC----cchhhhh
Q 024721 45 ELGG--LKAYVTGPP-HS--KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPK----YDKDTWR 115 (263)
Q Consensus 45 ~~~~--~~~~~~~~~-~~--~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~----~~~~~~~ 115 (263)
..+| +.+|+..|. .. -|+||.+||..+... .+... -.++..||.|+.+|.| |.+....+.. ....++.
T Consensus 63 s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~-~~~~~-~~~a~~G~~vl~~d~r-Gqg~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 63 SFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG-DPFDL-LPWAAAGYAVLAMDVR-GQGGRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp EGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG-GHHHH-HHHHHTT-EEEEE--T-TTSSSS-B-SSBSSS-SSSST
T ss_pred ccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC-Ccccc-cccccCCeEEEEecCC-CCCCCCCCccccCCCCCccHH
Confidence 3345 888998887 32 366777777666533 33332 2477899999999995 4431111100 0111111
Q ss_pred hc--CC-C-----ccccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEecCCCCC--------
Q 024721 116 KN--HT-T-----DKGYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT-------- 175 (263)
Q Consensus 116 ~~--~~-~-----~~~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~~-------- 175 (263)
.. .+ . ...+.|+..+++++.++ |.++|++.|.|+||.+++.+| -+++|+++++..|..-+
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d~~~~~~~~ 219 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLCDFRRALELR 219 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSSSHHHHHHHT
T ss_pred hcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCccchhhhhhcC
Confidence 00 01 1 23346888889998876 577999999999999999976 67899999998876521
Q ss_pred -----------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEE
Q 024721 176 -----------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVK 220 (263)
Q Consensus 176 -----------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 220 (263)
.+.+.++++|+++-.|-.|+++|+...-..++.++. ++++.
T Consensus 220 ~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~----~K~l~ 295 (320)
T PF05448_consen 220 ADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG----PKELV 295 (320)
T ss_dssp --STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S----SEEEE
T ss_pred CccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC----CeeEE
Confidence 234678999999999999999999999999999842 69999
Q ss_pred EcCCCCccccccCCCCChhhhhHHHHH-HHHHHHHHHHH
Q 024721 221 TYPGVCHGWTVRYFVNDTFAVNSAAEA-HEDMINWFEKH 258 (263)
Q Consensus 221 ~~~g~~H~~~~~~~~~~~~~~~~~~~~-~~~~~~fl~~~ 258 (263)
+||..+|... .+. .++.++||+++
T Consensus 296 vyp~~~He~~--------------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 296 VYPEYGHEYG--------------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp EETT--SSTT--------------HHHHHHHHHHHHHH-
T ss_pred eccCcCCCch--------------hhHHHHHHHHHHhcC
Confidence 9999999653 344 78899999875
No 38
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.78 E-value=5.3e-18 Score=136.31 Aligned_cols=169 Identities=17% Similarity=0.307 Sum_probs=114.1
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKG 138 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 138 (263)
.+|++|++||. +.+...|..+++.|. .||.|+++|++ |.|.+.... ...+.+...+|+..+++.+ +
T Consensus 12 ~~~~li~~hg~-~~~~~~~~~~~~~l~-~~~~v~~~d~~-G~G~s~~~~--------~~~~~~~~~~~~~~~i~~~---~ 77 (251)
T TIGR02427 12 GAPVLVFINSL-GTDLRMWDPVLPALT-PDFRVLRYDKR-GHGLSDAPE--------GPYSIEDLADDVLALLDHL---G 77 (251)
T ss_pred CCCeEEEEcCc-ccchhhHHHHHHHhh-cccEEEEecCC-CCCCCCCCC--------CCCCHHHHHHHHHHHHHHh---C
Confidence 34556666664 544457788888886 58999999995 443321110 1123344455665555544 5
Q ss_pred CCeEEEEEEeccHHHHHHhhcC--CCccEEEEecCCCC--------------------------------------C---
Q 024721 139 VSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSNV--------------------------------------T--- 175 (263)
Q Consensus 139 ~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~~--------------------------------------~--- 175 (263)
.+++.++|||+||.+++.+|.. ..+++++++++... .
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPAR 157 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHH
Confidence 6789999999999999998733 36666665543210 0
Q ss_pred ----------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCc
Q 024721 176 ----------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCH 227 (263)
Q Consensus 176 ----------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 227 (263)
...+.++++|+++++|++|..+|.+..+.+.+.++ +.+++++++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH 232 (251)
T TIGR02427 158 LDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-----GARFAEIRGAGH 232 (251)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-----CceEEEECCCCC
Confidence 01234578999999999999999988887777763 467899999999
Q ss_pred cccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 228 GWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
....+ ..++..+.+.+||+
T Consensus 233 ~~~~~----------~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 233 IPCVE----------QPEAFNAALRDFLR 251 (251)
T ss_pred ccccc----------ChHHHHHHHHHHhC
Confidence 77542 24677778888763
No 39
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.78 E-value=1.2e-17 Score=133.88 Aligned_cols=161 Identities=15% Similarity=0.190 Sum_probs=114.6
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCCC
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGVS 140 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 140 (263)
|+||++||+.+.. ..|..+++.|++ +|.|+++|++ |.+.+.... ..++..+++.+.+...+
T Consensus 5 ~~iv~~HG~~~~~-~~~~~~~~~l~~-~~~vi~~d~~-G~G~s~~~~----------------~~~~~~~~~~~~~~~~~ 65 (245)
T TIGR01738 5 VHLVLIHGWGMNA-EVFRCLDEELSA-HFTLHLVDLP-GHGRSRGFG----------------PLSLADAAEAIAAQAPD 65 (245)
T ss_pred ceEEEEcCCCCch-hhHHHHHHhhcc-CeEEEEecCC-cCccCCCCC----------------CcCHHHHHHHHHHhCCC
Confidence 6799999865554 577888998874 6999999995 443221110 02344445555444456
Q ss_pred eEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCC-------C------------------------------------
Q 024721 141 AVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNV-------T------------------------------------ 175 (263)
Q Consensus 141 ~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~-------~------------------------------------ 175 (263)
+++++||||||.+++.++. .| ++++++++.+... .
T Consensus 66 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (245)
T TIGR01738 66 PAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPT 145 (245)
T ss_pred CeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc
Confidence 8999999999999999883 34 5888887643210 0
Q ss_pred -----------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEE
Q 024721 176 -----------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVK 220 (263)
Q Consensus 176 -----------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 220 (263)
...+.++++|+|+++|++|.++|.+..+.+.+.++ +.+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~ 220 (245)
T TIGR01738 146 ARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-----HSELY 220 (245)
T ss_pred cchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-----CCeEE
Confidence 01235688999999999999999988887777663 57899
Q ss_pred EcCCCCccccccCCCCChhhhhHHHHHHHHHHHHH
Q 024721 221 TYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWF 255 (263)
Q Consensus 221 ~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 255 (263)
+++++||....+ ..+++.+.+.+|+
T Consensus 221 ~~~~~gH~~~~e----------~p~~~~~~i~~fi 245 (245)
T TIGR01738 221 IFAKAAHAPFLS----------HAEAFCALLVAFK 245 (245)
T ss_pred EeCCCCCCcccc----------CHHHHHHHHHhhC
Confidence 999999987553 2567778888774
No 40
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.78 E-value=9.8e-18 Score=133.03 Aligned_cols=107 Identities=25% Similarity=0.369 Sum_probs=81.0
Q ss_pred CCCeEEEEEEeccHHHHHHhh-cC-CCccEEEEecCCCCChhhh----hcc-cccEEEEecCCCCCCChHHHHHHHHHHH
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA-SN-QDVQAAVLLHPSNVTEDEI----KVV-KVPIAVLGAERDNGLPPAQMKRFDEILY 210 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a-~~-~~i~~~v~~~~~~~~~~~~----~~~-~~p~l~i~G~~D~~~~~~~~~~~~~~l~ 210 (263)
+.++|++.|+|+||.+++.++ +. ..+.++++++|........ ... +.|++++||++|+++|.+..+...+.|
T Consensus 103 ~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L- 181 (216)
T PF02230_consen 103 DPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRPEALAKTPILIIHGDEDPVVPFEWAEKTAEFL- 181 (216)
T ss_dssp -GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHH-
T ss_pred ChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccccccCCCcEEEEecCCCCcccHHHHHHHHHHH-
Confidence 567999999999999999988 33 4999999999887543222 122 679999999999999999999999999
Q ss_pred cCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHh
Q 024721 211 AKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 211 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l 259 (263)
++.+.+++++.|+|.+|... .+..+.+.+||++++
T Consensus 182 ~~~~~~v~~~~~~g~gH~i~--------------~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 182 KAAGANVEFHEYPGGGHEIS--------------PEELRDLREFLEKHI 216 (216)
T ss_dssp HCTT-GEEEEEETT-SSS----------------HHHHHHHHHHHHHH-
T ss_pred HhcCCCEEEEEcCCCCCCCC--------------HHHHHHHHHHHhhhC
Confidence 45666899999999999773 578888999999874
No 41
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.77 E-value=6.6e-17 Score=133.74 Aligned_cols=187 Identities=16% Similarity=0.210 Sum_probs=121.7
Q ss_pred CceEEeeCCeeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCC
Q 024721 40 AGTVTELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 119 (263)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~ 119 (263)
.....++++.+.++... +.+++||++||+.... ..|..+.+.|.+ +|+|+++|++ |.|.+...... .++
T Consensus 15 ~~~~~~~~~~~i~y~~~-G~~~~iv~lHG~~~~~-~~~~~~~~~l~~-~~~vi~~D~~-G~G~S~~~~~~-------~~~ 83 (286)
T PRK03204 15 ESRWFDSSRGRIHYIDE-GTGPPILLCHGNPTWS-FLYRDIIVALRD-RFRCVAPDYL-GFGLSERPSGF-------GYQ 83 (286)
T ss_pred cceEEEcCCcEEEEEEC-CCCCEEEEECCCCccH-HHHHHHHHHHhC-CcEEEEECCC-CCCCCCCCCcc-------ccC
Confidence 34555667766655433 3457899998876543 467888888865 5999999996 43322211100 112
Q ss_pred CccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc-C-CCccEEEEecCCCC-----------------------
Q 024721 120 TDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS-N-QDVQAAVLLHPSNV----------------------- 174 (263)
Q Consensus 120 ~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~-~-~~i~~~v~~~~~~~----------------------- 174 (263)
.+...+++..+++.+ +.+++.++||||||.+++.++. . .+++++|++.+...
T Consensus 84 ~~~~~~~~~~~~~~~---~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T PRK03204 84 IDEHARVIGEFVDHL---GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAI 160 (286)
T ss_pred HHHHHHHHHHHHHHh---CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhh
Confidence 233334444444443 6678999999999999999873 3 38888886543210
Q ss_pred -------------------Ch----------------h--------------hhhc---------ccccEEEEecCCCCC
Q 024721 175 -------------------TE----------------D--------------EIKV---------VKVPIAVLGAERDNG 196 (263)
Q Consensus 175 -------------------~~----------------~--------------~~~~---------~~~p~l~i~G~~D~~ 196 (263)
+. . .+.. +++|+|+++|++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~ 240 (286)
T PRK03204 161 LRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVA 240 (286)
T ss_pred hhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcc
Confidence 00 0 0001 179999999999999
Q ss_pred CChH-HHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHH
Q 024721 197 LPPA-QMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWF 255 (263)
Q Consensus 197 ~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 255 (263)
+++. ..+.+.+.++ +.++++++++||....+ ..+++.+.+.+||
T Consensus 241 ~~~~~~~~~~~~~ip-----~~~~~~i~~aGH~~~~e----------~Pe~~~~~i~~~~ 285 (286)
T PRK03204 241 FRPKTILPRLRATFP-----DHVLVELPNAKHFIQED----------APDRIAAAIIERF 285 (286)
T ss_pred cCcHHHHHHHHHhcC-----CCeEEEcCCCccccccc----------CHHHHHHHHHHhc
Confidence 8655 4566666663 57899999999987653 3568888888886
No 42
>PRK10985 putative hydrolase; Provisional
Probab=99.76 E-value=6.7e-17 Score=136.03 Aligned_cols=183 Identities=15% Similarity=0.198 Sum_probs=124.5
Q ss_pred CCeeEEEEecccCCCc-hhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 59 SKKAVLMISDIYGDEP-PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~-~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
++|.||++||..|... .++..+++.|+++||.|+++|+| |.+..+...... + .....+|+..+++++.+.
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~r-G~g~~~~~~~~~-------~-~~~~~~D~~~~i~~l~~~ 127 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFR-GCSGEPNRLHRI-------Y-HSGETEDARFFLRWLQRE 127 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCC-CCCCCccCCcce-------E-CCCchHHHHHHHHHHHHh
Confidence 3567888888776532 35567899999999999999996 433222111000 0 122458999999999875
Q ss_pred -CCCeEEEEEEeccHHHHHHhh-cC-C--CccEEEEecCCCC--------------------------------------
Q 024721 138 -GVSAVGAAGFCWGGKVAVKLA-SN-Q--DVQAAVLLHPSNV-------------------------------------- 174 (263)
Q Consensus 138 -~~~~i~~~G~S~Gg~~a~~~a-~~-~--~i~~~v~~~~~~~-------------------------------------- 174 (263)
+..+++++||||||.++..++ .. + .+++++++++...
T Consensus 128 ~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 207 (324)
T PRK10985 128 FGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGT 207 (324)
T ss_pred CCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 566899999999999877755 32 2 4788777665420
Q ss_pred ---------------------------------------ChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCC
Q 024721 175 ---------------------------------------TEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKF 215 (263)
Q Consensus 175 ---------------------------------------~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~ 215 (263)
....++++++|+|+++|++|++++++..+.+.+.. .
T Consensus 208 ~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-----~ 282 (324)
T PRK10985 208 LPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLP-----P 282 (324)
T ss_pred ccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhC-----C
Confidence 01235677899999999999999987766553332 1
Q ss_pred ceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 216 DHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 216 ~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
+.++.+++++||.-..+..... ......+.+.+||+..+.
T Consensus 283 ~~~~~~~~~~GH~~~~~g~~~~-----~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 283 NVEYQLTEHGGHVGFVGGTLLK-----PQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred CeEEEECCCCCceeeCCCCCCC-----CCccHHHHHHHHHHHhhc
Confidence 5788899999996654432110 124667789999987654
No 43
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.76 E-value=6.6e-17 Score=140.82 Aligned_cols=187 Identities=17% Similarity=0.205 Sum_probs=122.3
Q ss_pred eeCCeeEEEe--CCCC--CCeeEEEEecccCCCchhhHH-HHHHHH---hCCCEEEeecCCCCCCCCCCCCCcchhhhhh
Q 024721 45 ELGGLKAYVT--GPPH--SKKAVLMISDIYGDEPPIYRS-VADKVA---GAGFLVVAPDFFHGDAANPSNPKYDKDTWRK 116 (263)
Q Consensus 45 ~~~~~~~~~~--~~~~--~~~~vv~~h~~~g~~~~~~~~-~~~~l~---~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~ 116 (263)
+.++.+.|+. .|++ .+++||++||+.+.. ..|.. +...|+ +++|.|+++|++ |.|.+..... .
T Consensus 182 ~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~-G~G~S~~p~~-------~ 252 (481)
T PLN03087 182 SSSNESLFVHVQQPKDNKAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLL-GFGRSPKPAD-------S 252 (481)
T ss_pred eeCCeEEEEEEecCCCCCCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCC-CCCCCcCCCC-------C
Confidence 4455555443 4433 246899999887665 34543 445555 368999999996 3332221111 0
Q ss_pred cCCCccccccHH-HHHHHHHhcCCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC-------------------
Q 024721 117 NHTTDKGYEDAK-PVIAALKEKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV------------------- 174 (263)
Q Consensus 117 ~~~~~~~~~d~~-~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~------------------- 174 (263)
.++.+...+++. .+++. .+..++.++||||||.+++.+| .+| ++++++++.+...
T Consensus 253 ~ytl~~~a~~l~~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~ 329 (481)
T PLN03087 253 LYTLREHLEMIERSVLER---YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPR 329 (481)
T ss_pred cCCHHHHHHHHHHHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhccc
Confidence 122334444442 34443 3677999999999999999987 444 7888888763210
Q ss_pred ---C----------------h--------------------------h-------------h------------------
Q 024721 175 ---T----------------E--------------------------D-------------E------------------ 178 (263)
Q Consensus 175 ---~----------------~--------------------------~-------------~------------------ 178 (263)
. . . .
T Consensus 330 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 409 (481)
T PLN03087 330 RVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGY 409 (481)
T ss_pred ccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhH
Confidence 0 0 0 0
Q ss_pred h----hcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHH
Q 024721 179 I----KVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINW 254 (263)
Q Consensus 179 ~----~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~f 254 (263)
+ .++++|+|+++|++|+++|++..+.+.+.++ +.++++++++||..... +..++..+.+.+|
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-----~a~l~vI~~aGH~~~v~---------e~p~~fa~~L~~F 475 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-----RARVKVIDDKDHITIVV---------GRQKEFARELEEI 475 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-----CCEEEEeCCCCCcchhh---------cCHHHHHHHHHHH
Confidence 0 1478999999999999999999988888874 58899999999975421 1246778888888
Q ss_pred HHH
Q 024721 255 FEK 257 (263)
Q Consensus 255 l~~ 257 (263)
.+.
T Consensus 476 ~~~ 478 (481)
T PLN03087 476 WRR 478 (481)
T ss_pred hhc
Confidence 764
No 44
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.76 E-value=1.2e-16 Score=131.39 Aligned_cols=197 Identities=17% Similarity=0.174 Sum_probs=119.4
Q ss_pred eeEEEeCCC----CCCeeEEEEecccCCCchhhHH--HHHHHH-hCCCEEEeecCC-CCCCCCCCC--CCcch-hhhhhc
Q 024721 49 LKAYVTGPP----HSKKAVLMISDIYGDEPPIYRS--VADKVA-GAGFLVVAPDFF-HGDAANPSN--PKYDK-DTWRKN 117 (263)
Q Consensus 49 ~~~~~~~~~----~~~~~vv~~h~~~g~~~~~~~~--~~~~l~-~~G~~vv~~d~~-~g~~~~~~~--~~~~~-~~~~~~ 117 (263)
++.+++.|+ ++.|.|+++||..+.. ..+.. ....++ +.||.|++||.. +|.+.+... ...+. ..|+..
T Consensus 27 ~~~~v~~P~~~~~~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d 105 (275)
T TIGR02821 27 MTFGVFLPPQAAAGPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVD 105 (275)
T ss_pred eEEEEEcCCCccCCCCCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcccccc
Confidence 456666664 2346677777665543 33322 233444 469999999984 333211100 00000 001100
Q ss_pred CCC---c---ccccc-HHHHHHHHHh---cCCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC----------
Q 024721 118 HTT---D---KGYED-AKPVIAALKE---KGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT---------- 175 (263)
Q Consensus 118 ~~~---~---~~~~d-~~~~~~~l~~---~~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~---------- 175 (263)
... . ..... ...+...+.+ .+.++++++||||||.+++.++ +.+ .++++++++|....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (275)
T TIGR02821 106 ATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQKAF 185 (275)
T ss_pred CCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHHHH
Confidence 000 0 01111 1222223333 2567999999999999999988 333 78888887776311
Q ss_pred -------h---------hhhh--cccccEEEEecCCCCCCCh-HHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCC
Q 024721 176 -------E---------DEIK--VVKVPIAVLGAERDNGLPP-AQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVN 236 (263)
Q Consensus 176 -------~---------~~~~--~~~~p~l~i~G~~D~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~ 236 (263)
. .... ....|+++.+|++|+.++. .....+.+.++ +.+.++++..+||++|+|.
T Consensus 186 ~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~-~~g~~v~~~~~~g~~H~f~------ 258 (275)
T TIGR02821 186 SAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACR-AAGQALTLRRQAGYDHSYY------ 258 (275)
T ss_pred HHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHH-HcCCCeEEEEeCCCCccch------
Confidence 0 0011 2357999999999999998 56678888884 4677899999999999993
Q ss_pred ChhhhhHHHHHHHHHHHHHHHHh
Q 024721 237 DTFAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 237 ~~~~~~~~~~~~~~~~~fl~~~l 259 (263)
.....++..++|+..++
T Consensus 259 ------~~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 259 ------FIASFIADHLRHHAERL 275 (275)
T ss_pred ------hHHHhHHHHHHHHHhhC
Confidence 35678888888887653
No 45
>PRK07581 hypothetical protein; Validated
Probab=99.76 E-value=3.3e-17 Score=138.85 Aligned_cols=196 Identities=12% Similarity=0.159 Sum_probs=122.4
Q ss_pred eCCeeEEEeCCCC---CCeeEEEEecccCCCchhhHHHH---HHHHhCCCEEEeecCC-CCCCCCCCCC--Ccchhhhhh
Q 024721 46 LGGLKAYVTGPPH---SKKAVLMISDIYGDEPPIYRSVA---DKVAGAGFLVVAPDFF-HGDAANPSNP--KYDKDTWRK 116 (263)
Q Consensus 46 ~~~~~~~~~~~~~---~~~~vv~~h~~~g~~~~~~~~~~---~~l~~~G~~vv~~d~~-~g~~~~~~~~--~~~~~~~~~ 116 (263)
+++++.++...+. .++++|++||+++.+...+..+. +.|...+|.|+++|++ +|.+..+... ..+ ..
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~----~~ 98 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFN----AA 98 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCC----CC
Confidence 3455555543221 24456666777664433443332 3666678999999996 3433222110 000 00
Q ss_pred cCCCccccccHHHHHHHHHh-cCCCeE-EEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC------------------
Q 024721 117 NHTTDKGYEDAKPVIAALKE-KGVSAV-GAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV------------------ 174 (263)
Q Consensus 117 ~~~~~~~~~d~~~~~~~l~~-~~~~~i-~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~------------------ 174 (263)
.+......+|+......+.+ .+.+++ .++||||||.+++.+| .+| +++++|++++...
T Consensus 99 ~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 99 RFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTA 178 (339)
T ss_pred CCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHh
Confidence 11112234666654444433 477885 7899999999999988 444 6777776521100
Q ss_pred --------------------------------------------------------------C-----------------
Q 024721 175 --------------------------------------------------------------T----------------- 175 (263)
Q Consensus 175 --------------------------------------------------------------~----------------- 175 (263)
.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccc
Confidence 0
Q ss_pred ---------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCC-CCccccccCCCCChhhhhHHH
Q 024721 176 ---------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPG-VCHGWTVRYFVNDTFAVNSAA 245 (263)
Q Consensus 176 ---------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~ 245 (263)
...+.++++|+|+++|++|..+|++..+.+.+.++ +.+++++++ +||..... ..+
T Consensus 259 ~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-----~a~l~~i~~~~GH~~~~~----------~~~ 323 (339)
T PRK07581 259 RNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP-----NAELRPIESIWGHLAGFG----------QNP 323 (339)
T ss_pred cCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEeCCCCCcccccc----------CcH
Confidence 00123467999999999999999988888877763 478899998 89976543 245
Q ss_pred HHHHHHHHHHHHHhh
Q 024721 246 EAHEDMINWFEKHVK 260 (263)
Q Consensus 246 ~~~~~~~~fl~~~l~ 260 (263)
++.+.+.+||++.+.
T Consensus 324 ~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 324 ADIAFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHHHHh
Confidence 788899999998764
No 46
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.75 E-value=1.4e-17 Score=141.31 Aligned_cols=185 Identities=17% Similarity=0.230 Sum_probs=125.1
Q ss_pred eCCeeEEEeCCCCCCeeEEEEecccCCCch-----------hhHHHHH---HHHhCCCEEEeecCCCCCCCCCCCCCcch
Q 024721 46 LGGLKAYVTGPPHSKKAVLMISDIYGDEPP-----------IYRSVAD---KVAGAGFLVVAPDFFHGDAANPSNPKYDK 111 (263)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vv~~h~~~g~~~~-----------~~~~~~~---~l~~~G~~vv~~d~~~g~~~~~~~~~~~~ 111 (263)
.++++.++......++++|++||+++.... +|..+.+ .|...+|.|+++|++ |.+.+...
T Consensus 43 ~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~-G~g~s~~~----- 116 (343)
T PRK08775 43 LEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFI-GADGSLDV----- 116 (343)
T ss_pred CCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCC-CCCCCCCC-----
Confidence 356666665433234568999988887543 5666665 464457999999996 43322110
Q ss_pred hhhhhcCCCccccccHHHHHHHHHhcCCCe-EEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCC--------------
Q 024721 112 DTWRKNHTTDKGYEDAKPVIAALKEKGVSA-VGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNV-------------- 174 (263)
Q Consensus 112 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~-------------- 174 (263)
.++.+...+|+.++++.+ +.++ +.++||||||.+++.+|. +| +++++|++.+...
T Consensus 117 -----~~~~~~~a~dl~~ll~~l---~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~ 188 (343)
T PRK08775 117 -----PIDTADQADAIALLLDAL---GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRR 188 (343)
T ss_pred -----CCCHHHHHHHHHHHHHHc---CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHH
Confidence 122334456666666554 6555 579999999999999883 34 7787777653210
Q ss_pred ---------------------------C----------------------------------------------------
Q 024721 175 ---------------------------T---------------------------------------------------- 175 (263)
Q Consensus 175 ---------------------------~---------------------------------------------------- 175 (263)
.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T PRK08775 189 AVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL 268 (343)
T ss_pred HHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh
Confidence 0
Q ss_pred -hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCC-CCccccccCCCCChhhhhHHHHHHHHHHH
Q 024721 176 -EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPG-VCHGWTVRYFVNDTFAVNSAAEAHEDMIN 253 (263)
Q Consensus 176 -~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (263)
...+.++++|+|+++|++|.++|.+..+.+.+.+.. +.++.++++ +||....+ ..+++.+.+.+
T Consensus 269 ~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p----~a~l~~i~~~aGH~~~lE----------~Pe~~~~~l~~ 334 (343)
T PRK08775 269 HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGP----RGSLRVLRSPYGHDAFLK----------ETDRIDAILTT 334 (343)
T ss_pred cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC----CCeEEEEeCCccHHHHhc----------CHHHHHHHHHH
Confidence 001235678999999999999998888888777621 477899984 89987653 35788999999
Q ss_pred HHHHH
Q 024721 254 WFEKH 258 (263)
Q Consensus 254 fl~~~ 258 (263)
||++.
T Consensus 335 FL~~~ 339 (343)
T PRK08775 335 ALRST 339 (343)
T ss_pred HHHhc
Confidence 99753
No 47
>PLN02511 hydrolase
Probab=99.74 E-value=1.1e-16 Score=137.66 Aligned_cols=184 Identities=18% Similarity=0.174 Sum_probs=121.6
Q ss_pred CCeeEEEEecccCCCch-hhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 59 SKKAVLMISDIYGDEPP-IYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~-~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
.+|.||++||+.|.... ++..++..+.++||.|+++|+| |.|.+..... ........+|+..+++++...
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~r-G~G~s~~~~~--------~~~~~~~~~Dl~~~i~~l~~~ 169 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSR-GCADSPVTTP--------QFYSASFTGDLRQVVDHVAGR 169 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecC-CCCCCCCCCc--------CEEcCCchHHHHHHHHHHHHH
Confidence 45678899988776533 5567788888899999999996 4432221100 011235568999999999875
Q ss_pred -CCCeEEEEEEeccHHHHHHhh-cCC-C--ccEEEEecCCCC--------------------------------------
Q 024721 138 -GVSAVGAAGFCWGGKVAVKLA-SNQ-D--VQAAVLLHPSNV-------------------------------------- 174 (263)
Q Consensus 138 -~~~~i~~~G~S~Gg~~a~~~a-~~~-~--i~~~v~~~~~~~-------------------------------------- 174 (263)
+..+++++||||||.+++.++ ..+ + +++.+++++...
T Consensus 170 ~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~ 249 (388)
T PLN02511 170 YPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGL 249 (388)
T ss_pred CCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 345899999999999999976 333 3 677766543210
Q ss_pred ----C------------------------------------hhhhhcccccEEEEecCCCCCCChHHHH-HHHHHHHcCC
Q 024721 175 ----T------------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMK-RFDEILYAKP 213 (263)
Q Consensus 175 ----~------------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~-~~~~~l~~~~ 213 (263)
. ...+.++++|+|+++|++|+++|.+... ...+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~---- 325 (388)
T PLN02511 250 GGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN---- 325 (388)
T ss_pred CCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC----
Confidence 0 0123468899999999999999876542 232222
Q ss_pred CCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 214 KFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 214 ~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
.+.++.+++++||.-..+..... .......+.+.+||+....
T Consensus 326 -p~~~l~~~~~gGH~~~~E~p~~~----~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 326 -PNCLLIVTPSGGHLGWVAGPEAP----FGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred -CCEEEEECCCcceeccccCCCCC----CCCccHHHHHHHHHHHHHH
Confidence 26889999999996654332110 0012456778888876543
No 48
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.74 E-value=1.6e-16 Score=135.12 Aligned_cols=191 Identities=18% Similarity=0.226 Sum_probs=130.2
Q ss_pred eeCCeeEEEeCCCC---CCeeEEEEecccCCCc----hhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhc
Q 024721 45 ELGGLKAYVTGPPH---SKKAVLMISDIYGDEP----PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN 117 (263)
Q Consensus 45 ~~~~~~~~~~~~~~---~~~~vv~~h~~~g~~~----~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~ 117 (263)
+.+.+..+.+.|.. .+++||++|+...... ...+.++++|+++||.|+++|++ |.+.+.. .
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~-g~g~s~~-----------~ 111 (350)
T TIGR01836 44 REDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWG-YPDRADR-----------Y 111 (350)
T ss_pred EcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCC-CCCHHHh-----------c
Confidence 45567777777642 2456888886533211 11357999999999999999994 3221110 1
Q ss_pred CCCcccc-ccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC-------------------
Q 024721 118 HTTDKGY-EDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV------------------- 174 (263)
Q Consensus 118 ~~~~~~~-~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~------------------- 174 (263)
.+.+.+. +++.++++++.+. +.+++.++||||||.+++.++ ..+ ++++++++.+...
T Consensus 112 ~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (350)
T TIGR01836 112 LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDL 191 (350)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHH
Confidence 1223343 3578888888776 567999999999999999976 333 6777777554210
Q ss_pred --------------------------------------C-----------------------------------------
Q 024721 175 --------------------------------------T----------------------------------------- 175 (263)
Q Consensus 175 --------------------------------------~----------------------------------------- 175 (263)
.
T Consensus 192 ~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g 271 (350)
T TIGR01836 192 AVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLING 271 (350)
T ss_pred HHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCC
Confidence 0
Q ss_pred -------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHH
Q 024721 176 -------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAH 248 (263)
Q Consensus 176 -------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~ 248 (263)
...+.++++|+|+++|++|.++|++..+.+.+.+.. .++++.+++++.|.+.... +..++++
T Consensus 272 ~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~--------~~~~~v~ 340 (350)
T TIGR01836 272 EVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSS---EDYTELSFPGGHIGIYVSG--------KAQKEVP 340 (350)
T ss_pred eeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCC---CCeEEEEcCCCCEEEEECc--------hhHhhhh
Confidence 001335689999999999999999999999888732 3678889986444443322 2368999
Q ss_pred HHHHHHHHHH
Q 024721 249 EDMINWFEKH 258 (263)
Q Consensus 249 ~~~~~fl~~~ 258 (263)
+.+.+||+++
T Consensus 341 ~~i~~wl~~~ 350 (350)
T TIGR01836 341 PAIGKWLQAR 350 (350)
T ss_pred HHHHHHHHhC
Confidence 9999999863
No 49
>PLN02872 triacylglycerol lipase
Probab=99.74 E-value=3.1e-17 Score=140.31 Aligned_cols=186 Identities=16% Similarity=0.106 Sum_probs=123.4
Q ss_pred CeeEEEEecccCCCchh-----hHHHHHHHHhCCCEEEeecCCCCCCCCCC---CCCcchhhhhhcCCCcccc-ccHHHH
Q 024721 60 KKAVLMISDIYGDEPPI-----YRSVADKVAGAGFLVVAPDFFHGDAANPS---NPKYDKDTWRKNHTTDKGY-EDAKPV 130 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~-----~~~~~~~l~~~G~~vv~~d~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~-~d~~~~ 130 (263)
+|+|+++||.......+ .+.++..|+++||.|+++|.| |.+++.. ....... + ..++..+.. .|+.++
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~R-G~~~s~gh~~~~~~~~~-f-w~~s~~e~a~~Dl~a~ 150 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVR-GTRWSYGHVTLSEKDKE-F-WDWSWQELALYDLAEM 150 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccc-ccccccCCCCCCccchh-c-cCCcHHHHHHHHHHHH
Confidence 56788888876544322 145777899999999999996 3322111 0000101 0 123334444 799999
Q ss_pred HHHHHhcCCCeEEEEEEeccHHHHHHhhcCC----CccEEEEecCCC---------------------------------
Q 024721 131 IAALKEKGVSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPSN--------------------------------- 173 (263)
Q Consensus 131 ~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~--------------------------------- 173 (263)
++++.+...+++.++|||+||.+++.++.++ +++.++++.|..
T Consensus 151 id~i~~~~~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (395)
T PLN02872 151 IHYVYSITNSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFR 230 (395)
T ss_pred HHHHHhccCCceEEEEECHHHHHHHHHhhChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCC
Confidence 9999876557999999999999988654322 233222221110
Q ss_pred --------------------------------------------------------------------------------
Q 024721 174 -------------------------------------------------------------------------------- 173 (263)
Q Consensus 174 -------------------------------------------------------------------------------- 173 (263)
T Consensus 231 ~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg 310 (395)
T PLN02872 231 SDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYG 310 (395)
T ss_pred cHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhC
Confidence
Q ss_pred ---CChhhhhcc--cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcc--ccccCCCCChhhhhHHHH
Q 024721 174 ---VTEDEIKVV--KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHG--WTVRYFVNDTFAVNSAAE 246 (263)
Q Consensus 174 ---~~~~~~~~~--~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~--~~~~~~~~~~~~~~~~~~ 246 (263)
.+.-.+.++ ++|+++++|++|.+++++.++.+.+.++. ..++..+++.+|. +... ++.++
T Consensus 311 ~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~----~~~l~~l~~~gH~dfi~~~---------eape~ 377 (395)
T PLN02872 311 QVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS----KPELLYLENYGHIDFLLST---------SAKED 377 (395)
T ss_pred CCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC----ccEEEEcCCCCCHHHHhCc---------chHHH
Confidence 001235666 57999999999999999999998888842 2578889999996 2121 34678
Q ss_pred HHHHHHHHHHHHhhh
Q 024721 247 AHEDMINWFEKHVKC 261 (263)
Q Consensus 247 ~~~~~~~fl~~~l~~ 261 (263)
+.+.+++||+++...
T Consensus 378 V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 378 VYNHMIQFFRSLGKS 392 (395)
T ss_pred HHHHHHHHHHHhhhc
Confidence 999999999987654
No 50
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.74 E-value=1.4e-16 Score=124.61 Aligned_cols=185 Identities=18% Similarity=0.180 Sum_probs=129.4
Q ss_pred eeEEEeCCCCC-CeeEEEEecccCCCchhhHHHHHHHHh-CCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccccc
Q 024721 49 LKAYVTGPPHS-KKAVLMISDIYGDEPPIYRSVADKVAG-AGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED 126 (263)
Q Consensus 49 ~~~~~~~~~~~-~~~vv~~h~~~g~~~~~~~~~~~~l~~-~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (263)
+...+..|+.. .+.+|+.||-...-. -+..+-..|.. -.+.++.+|| .|.|.+.+.+ +.....+|
T Consensus 48 ~~~~y~~~~~~~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DY-SGyG~S~G~p-----------sE~n~y~D 114 (258)
T KOG1552|consen 48 IVCMYVRPPEAAHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDY-SGYGRSSGKP-----------SERNLYAD 114 (258)
T ss_pred EEEEEEcCccccceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEec-ccccccCCCc-----------ccccchhh
Confidence 33333444444 456666666533222 22233333444 2799999999 4444332221 22356699
Q ss_pred HHHHHHHHHhcC--CCeEEEEEEeccHHHHHHhhcCCCccEEEEecCCCC-------------------Chhhhhccccc
Q 024721 127 AKPVIAALKEKG--VSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNV-------------------TEDEIKVVKVP 185 (263)
Q Consensus 127 ~~~~~~~l~~~~--~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~-------------------~~~~~~~~~~p 185 (263)
+.++.++|++.. .++|+++|+|+|...++.+|....++++|+.+|... ..+..+.+++|
T Consensus 115 i~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~~i~~P 194 (258)
T KOG1552|consen 115 IKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYPLAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKISKITCP 194 (258)
T ss_pred HHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCCcceEEEeccchhhhhhhccCcceEEeeccccccCcceeccCC
Confidence 999999999884 689999999999999999885544999999887642 13456778999
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhh
Q 024721 186 IAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 186 ~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
+|++||++|++++.....++++..+. ..+-.+..|++|.....+ .+..+.+..|+..-...
T Consensus 195 VLiiHgtdDevv~~sHg~~Lye~~k~----~~epl~v~g~gH~~~~~~-----------~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 195 VLIIHGTDDEVVDFSHGKALYERCKE----KVEPLWVKGAGHNDIELY-----------PEYIEHLRRFISSVLPS 255 (258)
T ss_pred EEEEecccCceecccccHHHHHhccc----cCCCcEEecCCCcccccC-----------HHHHHHHHHHHHHhccc
Confidence 99999999999999999999999843 467778888999665432 46777777777765443
No 51
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.74 E-value=1.6e-16 Score=128.14 Aligned_cols=161 Identities=11% Similarity=0.167 Sum_probs=109.7
Q ss_pred CeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCC
Q 024721 60 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGV 139 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 139 (263)
+|+||++||+.+.. ..|..+.+.| + +|.|+++|++ |.|.+.... ..+.+...+|+.++++. .+.
T Consensus 2 ~p~vvllHG~~~~~-~~w~~~~~~l-~-~~~vi~~D~~-G~G~S~~~~---------~~~~~~~~~~l~~~l~~---~~~ 65 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDWQPVGEAL-P-DYPRLYIDLP-GHGGSAAIS---------VDGFADVSRLLSQTLQS---YNI 65 (242)
T ss_pred CCEEEEECCCCCCh-HHHHHHHHHc-C-CCCEEEecCC-CCCCCCCcc---------ccCHHHHHHHHHHHHHH---cCC
Confidence 46788999887765 5778888888 3 6999999996 333221110 11234444555555554 367
Q ss_pred CeEEEEEEeccHHHHHHhhc-C-C-CccEEEEecCCCC------------------------------------------
Q 024721 140 SAVGAAGFCWGGKVAVKLAS-N-Q-DVQAAVLLHPSNV------------------------------------------ 174 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a~-~-~-~i~~~v~~~~~~~------------------------------------------ 174 (263)
+++.++||||||.+++.+|. . + +++++++..+...
T Consensus 66 ~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (242)
T PRK11126 66 LPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASL 145 (242)
T ss_pred CCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhcc
Confidence 79999999999999999873 3 3 4999887543210
Q ss_pred -C---------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEE
Q 024721 175 -T---------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVK 220 (263)
Q Consensus 175 -~---------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 220 (263)
. ...+.++++|+++++|++|+.+. .+.+.. +.+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~------~~~~~ 214 (242)
T PRK11126 146 NAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL------ALPLH 214 (242)
T ss_pred CccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh------cCeEE
Confidence 0 01234578999999999998542 222221 57899
Q ss_pred EcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 221 TYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 221 ~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
.++++||.+..+ ..+++.+.+.+||++
T Consensus 215 ~i~~~gH~~~~e----------~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 215 VIPNAGHNAHRE----------NPAAFAASLAQILRL 241 (242)
T ss_pred EeCCCCCchhhh----------ChHHHHHHHHHHHhh
Confidence 999999977653 356888889999875
No 52
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.74 E-value=7e-17 Score=129.54 Aligned_cols=168 Identities=16% Similarity=0.294 Sum_probs=108.6
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHH-HhcCC
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAAL-KEKGV 139 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l-~~~~~ 139 (263)
|+||++||..+.. ..|..+++.|+ .||.|+++|++ |.+.+...... ...+.++..++ +++.+ ...+.
T Consensus 2 ~~vv~~hG~~~~~-~~~~~~~~~L~-~~~~v~~~d~~-g~G~s~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~ 69 (251)
T TIGR03695 2 PVLVFLHGFLGSG-ADWQALIELLG-PHFRCLAIDLP-GHGSSQSPDEI------ERYDFEEAAQD---ILATLLDQLGI 69 (251)
T ss_pred CEEEEEcCCCCch-hhHHHHHHHhc-ccCeEEEEcCC-CCCCCCCCCcc------ChhhHHHHHHH---HHHHHHHHcCC
Confidence 6788888877665 57889999998 79999999995 33322111000 01111222222 12222 22266
Q ss_pred CeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCC-------------------------------------------
Q 024721 140 SAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNV------------------------------------------- 174 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~------------------------------------------- 174 (263)
+++.++|||+||.+++.+|.. + .+++++++.+...
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQK 149 (251)
T ss_pred CeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecc
Confidence 799999999999999998843 3 6788877654310
Q ss_pred --C----------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCcee
Q 024721 175 --T----------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHL 218 (263)
Q Consensus 175 --~----------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~ 218 (263)
. ...+..+++|+++++|++|+.++ +..+.+.+.+ .+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-----~~~~ 223 (251)
T TIGR03695 150 NLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-----PNLT 223 (251)
T ss_pred cCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-----CCCc
Confidence 0 00134578999999999998764 3334443333 2578
Q ss_pred EEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 219 VKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 219 ~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
++.+|++||....+. .+++.+.+.+||+
T Consensus 224 ~~~~~~~gH~~~~e~----------~~~~~~~i~~~l~ 251 (251)
T TIGR03695 224 LVIIANAGHNIHLEN----------PEAFAKILLAFLE 251 (251)
T ss_pred EEEEcCCCCCcCccC----------hHHHHHHHHHHhC
Confidence 999999999775532 3578888888873
No 53
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.73 E-value=6e-17 Score=128.05 Aligned_cols=152 Identities=24% Similarity=0.403 Sum_probs=109.3
Q ss_pred EEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCCCeE
Q 024721 63 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGVSAV 142 (263)
Q Consensus 63 vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 142 (263)
||++||+.+.. ..|..+++.|+ +||.|+++|++ |.+.+..... ....+.++..+|+..+++ +.+.+++
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l~-~~~~v~~~d~~-G~G~s~~~~~------~~~~~~~~~~~~l~~~l~---~~~~~~~ 68 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEALA-RGYRVIAFDLP-GHGRSDPPPD------YSPYSIEDYAEDLAELLD---ALGIKKV 68 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHHH-TTSEEEEEECT-TSTTSSSHSS------GSGGSHHHHHHHHHHHHH---HTTTSSE
T ss_pred eEEECCCCCCH-HHHHHHHHHHh-CCCEEEEEecC-Cccccccccc------cCCcchhhhhhhhhhccc---ccccccc
Confidence 68888877765 67889999995 79999999995 4433222110 111222334445554444 4466799
Q ss_pred EEEEEeccHHHHHHhhc-CC-CccEEEEecCCCC-------C--------------------------------------
Q 024721 143 GAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNV-------T-------------------------------------- 175 (263)
Q Consensus 143 ~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~-------~-------------------------------------- 175 (263)
.++|||+||.+++.++. .+ ++++++++.+... .
T Consensus 69 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 69 ILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLI 148 (228)
T ss_dssp EEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccc
Confidence 99999999999999884 44 8999999887651 0
Q ss_pred --------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccc
Q 024721 176 --------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTV 231 (263)
Q Consensus 176 --------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 231 (263)
...++++++|+++++|++|.+++.+..+.+.+.++ ++++.++++++|....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 149 RSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-----NAELVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-----TEEEEEETTSSSTHHH
T ss_pred cccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-----CCEEEEECCCCCccHH
Confidence 01245678999999999999999888877777763 5899999999997754
No 54
>PLN02442 S-formylglutathione hydrolase
Probab=99.73 E-value=6.8e-16 Score=127.29 Aligned_cols=198 Identities=17% Similarity=0.191 Sum_probs=121.8
Q ss_pred eeEEEeCCC----CCCeeEEEEecccCCCchhh---HHHHHHHHhCCCEEEeecCC-CCCCCCCCCC--Ccch-hhhhh-
Q 024721 49 LKAYVTGPP----HSKKAVLMISDIYGDEPPIY---RSVADKVAGAGFLVVAPDFF-HGDAANPSNP--KYDK-DTWRK- 116 (263)
Q Consensus 49 ~~~~~~~~~----~~~~~vv~~h~~~g~~~~~~---~~~~~~l~~~G~~vv~~d~~-~g~~~~~~~~--~~~~-~~~~~- 116 (263)
+..+++.|+ .+.|.|+++||+.+... .+ ..+.+.++..||.|++||.. +|........ .... ..+..
T Consensus 32 ~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~ 110 (283)
T PLN02442 32 MTFSVYFPPASDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLN 110 (283)
T ss_pred eEEEEEcCCcccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeec
Confidence 667776664 23467777887666542 23 22446667779999999974 3311100000 0000 00000
Q ss_pred c-------CC-CccccccHHHHHHHH-HhcCCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCCh---------
Q 024721 117 N-------HT-TDKGYEDAKPVIAAL-KEKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTE--------- 176 (263)
Q Consensus 117 ~-------~~-~~~~~~d~~~~~~~l-~~~~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~~--------- 176 (263)
. .. .+...+++...++.. ...+.++++++||||||..++.++ +++ .++++++++|.....
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (283)
T PLN02442 111 ATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKAF 190 (283)
T ss_pred cccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHHH
Confidence 0 00 011223343344332 223778999999999999999987 334 788888887764210
Q ss_pred --------------------hhhhcccccEEEEecCCCCCCChH-HHHHHHHHHHcCCCCceeEEEcCCCCccccccCCC
Q 024721 177 --------------------DEIKVVKVPIAVLGAERDNGLPPA-QMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFV 235 (263)
Q Consensus 177 --------------------~~~~~~~~p~l~i~G~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~ 235 (263)
......++|+++++|++|++++.. ..+.+.+.++ +.+.+++++++||.+|.+.
T Consensus 191 ~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~-~~g~~~~~~~~pg~~H~~~----- 264 (283)
T PLN02442 191 TNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACK-EAGAPVTLRLQPGYDHSYF----- 264 (283)
T ss_pred HHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHH-HcCCCeEEEEeCCCCccHH-----
Confidence 012235789999999999999863 4677888884 4566899999999999883
Q ss_pred CChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 236 NDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
.....++..+.|..++++
T Consensus 265 -------~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 265 -------FIATFIDDHINHHAQALK 282 (283)
T ss_pred -------HHHHHHHHHHHHHHHHhc
Confidence 345566666677776665
No 55
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.73 E-value=4.6e-16 Score=127.78 Aligned_cols=182 Identities=17% Similarity=0.143 Sum_probs=119.0
Q ss_pred CCeeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccccc
Q 024721 47 GGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED 126 (263)
Q Consensus 47 ~~~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (263)
+|-++++..|.+.+|.||++||.++.. ..|..+++.|.++||.|+++|++ |.+.+...... ..+.+. +
T Consensus 5 ~~~~~~~~~~~~~~p~vvliHG~~~~~-~~w~~~~~~L~~~g~~vi~~dl~-g~G~s~~~~~~-------~~~~~~---~ 72 (273)
T PLN02211 5 NGEEVTDMKPNRQPPHFVLIHGISGGS-WCWYKIRCLMENSGYKVTCIDLK-SAGIDQSDADS-------VTTFDE---Y 72 (273)
T ss_pred cccccccccccCCCCeEEEECCCCCCc-CcHHHHHHHHHhCCCEEEEeccc-CCCCCCCCccc-------CCCHHH---H
Confidence 455555556766778899999987765 47889999999889999999996 33322111100 012222 3
Q ss_pred HHHHHHHHHhcC-CCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCC-----------------------------
Q 024721 127 AKPVIAALKEKG-VSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNV----------------------------- 174 (263)
Q Consensus 127 ~~~~~~~l~~~~-~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~----------------------------- 174 (263)
+..+.+.+.+.+ .++++++||||||.++..++. .+ +++++|.+.+...
T Consensus 73 ~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T PLN02211 73 NKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFG 152 (273)
T ss_pred HHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeec
Confidence 334444554443 478999999999999999874 33 6777776533100
Q ss_pred --------C-----------------h------------------------hhhhcc-cccEEEEecCCCCCCChHHHHH
Q 024721 175 --------T-----------------E------------------------DEIKVV-KVPIAVLGAERDNGLPPAQMKR 204 (263)
Q Consensus 175 --------~-----------------~------------------------~~~~~~-~~p~l~i~G~~D~~~~~~~~~~ 204 (263)
. . ....++ ++|+++|.|++|..+|++..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~ 232 (273)
T PLN02211 153 LGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEA 232 (273)
T ss_pred cCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHH
Confidence 0 0 001123 6799999999999999998888
Q ss_pred HHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 205 FDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 205 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
+.+.++ ..+++.++ +||.-... ..+++.+.+.+...
T Consensus 233 m~~~~~-----~~~~~~l~-~gH~p~ls----------~P~~~~~~i~~~a~ 268 (273)
T PLN02211 233 MIKRWP-----PSQVYELE-SDHSPFFS----------TPFLLFGLLIKAAA 268 (273)
T ss_pred HHHhCC-----ccEEEEEC-CCCCcccc----------CHHHHHHHHHHHHH
Confidence 887763 24677887 79976542 23455555555543
No 56
>PRK10115 protease 2; Provisional
Probab=99.73 E-value=4.9e-16 Score=141.93 Aligned_cols=198 Identities=13% Similarity=0.075 Sum_probs=138.0
Q ss_pred eCC--eeEE-EeCCC----CCCeeEEEEecccCCC-chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhc
Q 024721 46 LGG--LKAY-VTGPP----HSKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN 117 (263)
Q Consensus 46 ~~~--~~~~-~~~~~----~~~~~vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~ 117 (263)
-+| ++++ ++.|. ++.|.||+.||+++.. .+.|......|+++||+|+.+++|+|.++.. .|...
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~--------~w~~~ 495 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQ--------QWYED 495 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCH--------HHHHh
Confidence 355 6653 33342 3457899999998854 2355566678999999999999975543221 12111
Q ss_pred ---CCCccccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhhc-C-CCccEEEEecCCCC---------------
Q 024721 118 ---HTTDKGYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLAS-N-QDVQAAVLLHPSNV--------------- 174 (263)
Q Consensus 118 ---~~~~~~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a~-~-~~i~~~v~~~~~~~--------------- 174 (263)
....+..+|+.+++++|.++ ++++++++|.|.||.++..++. . ..++|+|+..|...
T Consensus 496 g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~ 575 (686)
T PRK10115 496 GKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTG 575 (686)
T ss_pred hhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChh
Confidence 11235568999999999887 5789999999999999999774 3 48999998766531
Q ss_pred ---------------------Chhhhhccccc-EEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEc---CCCCccc
Q 024721 175 ---------------------TEDEIKVVKVP-IAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTY---PGVCHGW 229 (263)
Q Consensus 175 ---------------------~~~~~~~~~~p-~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~g~~H~~ 229 (263)
+...+.+++.| +|+++|++|+.+|+....++..+|+. .+.+.+++++ ++.||+.
T Consensus 576 ~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~-~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 576 EFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRE-LKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred HHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHh-cCCCCceEEEEecCCCCCCC
Confidence 01234456678 67779999999999999999999954 4557777777 8999984
Q ss_pred cccCCCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 230 TVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
... . ...-+.......||-+.+.
T Consensus 655 ~~~--r------~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 655 KSG--R------FKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred CcC--H------HHHHHHHHHHHHHHHHHhC
Confidence 221 1 2233444556777776654
No 57
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.72 E-value=3.7e-17 Score=122.47 Aligned_cols=190 Identities=16% Similarity=0.179 Sum_probs=136.1
Q ss_pred EeeCCeeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhC-CCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCc
Q 024721 44 TELGGLKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTD 121 (263)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~-G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~ 121 (263)
..++|...-+-........|+++.|..|.....|......+... -+.++++|.+ +|.+..+. .. +..+
T Consensus 26 v~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~-Rk---------f~~~ 95 (277)
T KOG2984|consen 26 VHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE-RK---------FEVQ 95 (277)
T ss_pred eeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCc-cc---------chHH
Confidence 35566554444434444578999999997666666655555544 3899999996 45543332 11 2223
Q ss_pred cccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCC-------------------------
Q 024721 122 KGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNV------------------------- 174 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~------------------------- 174 (263)
...+|...+++.++..+..++.++|||=||..++.+|.. + .+..++.+.+...
T Consensus 96 ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P 175 (277)
T KOG2984|consen 96 FFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQP 175 (277)
T ss_pred HHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcch
Confidence 344788888888888888899999999999999997743 2 6666666544320
Q ss_pred --------------------------------ChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEc
Q 024721 175 --------------------------------TEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTY 222 (263)
Q Consensus 175 --------------------------------~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 222 (263)
....+++++||+|+++|++|++++...+..+.... + ..++.++
T Consensus 176 ~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~-~----~a~~~~~ 250 (277)
T KOG2984|consen 176 YEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK-S----LAKVEIH 250 (277)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc-c----cceEEEc
Confidence 02346889999999999999999987776655554 2 5789999
Q ss_pred CCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 223 PGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 223 ~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
|.++|.|..++ ++++.+.+.+||+++
T Consensus 251 peGkHn~hLry----------a~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 251 PEGKHNFHLRY----------AKEFNKLVLDFLKST 276 (277)
T ss_pred cCCCcceeeec----------hHHHHHHHHHHHhcc
Confidence 99999998865 569999999999864
No 58
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.72 E-value=2.1e-16 Score=117.76 Aligned_cols=180 Identities=18% Similarity=0.264 Sum_probs=122.6
Q ss_pred eeEEEeCCC-CCCeeEEEEec--ccCCC--chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccc
Q 024721 49 LKAYVTGPP-HSKKAVLMISD--IYGDE--PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG 123 (263)
Q Consensus 49 ~~~~~~~~~-~~~~~vv~~h~--~~g~~--~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 123 (263)
+.+.+..++ ...|..|++|. .+|++ ......++..|.++||.++.+|+| |-|.+....+.+. ..
T Consensus 16 le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfR-gVG~S~G~fD~Gi----------GE 84 (210)
T COG2945 16 LEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFR-GVGRSQGEFDNGI----------GE 84 (210)
T ss_pred ceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeeccc-ccccccCcccCCc----------ch
Confidence 444444333 23455556652 23322 235567888999999999999995 4333323222222 23
Q ss_pred cccHHHHHHHHHhcCC-CeE-EEEEEeccHHHHHHhhc-CCCccEEEEecCCCCC--hhhhhcccccEEEEecCCCCCCC
Q 024721 124 YEDAKPVIAALKEKGV-SAV-GAAGFCWGGKVAVKLAS-NQDVQAAVLLHPSNVT--EDEIKVVKVPIAVLGAERDNGLP 198 (263)
Q Consensus 124 ~~d~~~~~~~l~~~~~-~~i-~~~G~S~Gg~~a~~~a~-~~~i~~~v~~~~~~~~--~~~~~~~~~p~l~i~G~~D~~~~ 198 (263)
.+|..++++|++++.+ .+. .+.|+|+|+.++..+|. .+.+...++..|.... -..+.....|.++++|+.|++++
T Consensus 85 ~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~dfs~l~P~P~~~lvi~g~~Ddvv~ 164 (210)
T COG2945 85 LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDFSFLAPCPSPGLVIQGDADDVVD 164 (210)
T ss_pred HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhhhhccCCCCCceeEecChhhhhc
Confidence 4899999999998833 334 78999999999999884 4577777777765542 12345567899999999998877
Q ss_pred hHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 199 PAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
.....++.+- .+..++..++++|.|... ...+.+.+.+||.
T Consensus 165 l~~~l~~~~~------~~~~~i~i~~a~HFF~gK-----------l~~l~~~i~~~l~ 205 (210)
T COG2945 165 LVAVLKWQES------IKITVITIPGADHFFHGK-----------LIELRDTIADFLE 205 (210)
T ss_pred HHHHHHhhcC------CCCceEEecCCCceeccc-----------HHHHHHHHHHHhh
Confidence 6655544333 367889999999988643 4678888999984
No 59
>PLN00021 chlorophyllase
Probab=99.72 E-value=1e-15 Score=127.24 Aligned_cols=196 Identities=19% Similarity=0.206 Sum_probs=130.3
Q ss_pred CCeeEEEeCCCC--CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccc
Q 024721 47 GGLKAYVTGPPH--SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGY 124 (263)
Q Consensus 47 ~~~~~~~~~~~~--~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (263)
.++.+.++.|.. ..|+||++||+.+.. .+|..+++.|+++||.|+++|++ +.. +.. .....
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~-~~y~~l~~~Las~G~~VvapD~~-g~~--~~~-------------~~~~i 99 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYN-SFYSQLLQHIASHGFIVVAPQLY-TLA--GPD-------------GTDEI 99 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCc-ccHHHHHHHHHhCCCEEEEecCC-CcC--CCC-------------chhhH
Confidence 347777777753 346778888876654 57899999999999999999984 321 000 01122
Q ss_pred ccHHHHHHHHHh-----------cCCCeEEEEEEeccHHHHHHhhcC-C------CccEEEEecCCCCCh----------
Q 024721 125 EDAKPVIAALKE-----------KGVSAVGAAGFCWGGKVAVKLASN-Q------DVQAAVLLHPSNVTE---------- 176 (263)
Q Consensus 125 ~d~~~~~~~l~~-----------~~~~~i~~~G~S~Gg~~a~~~a~~-~------~i~~~v~~~~~~~~~---------- 176 (263)
+|...+++|+.+ .+.++++++|||+||.+++.+|.. + +++++++++|.....
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~il 179 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPVL 179 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCccc
Confidence 455566666654 134689999999999999998833 2 688999888753110
Q ss_pred ---hhhhcccccEEEEecCCCC-----C----CChHH-HHHHHHHHHcCCCCceeEEEcCCCCccccccCCCC-------
Q 024721 177 ---DEIKVVKVPIAVLGAERDN-----G----LPPAQ-MKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVN------- 236 (263)
Q Consensus 177 ---~~~~~~~~p~l~i~G~~D~-----~----~~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~------- 236 (263)
....++..|+|++.+..|. . .|... ..++++.++. ++.+.+.++++|.-..+....
T Consensus 180 ~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 255 (313)
T PLN00021 180 TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA----PAVHFVAKDYGHMDMLDDDTSGIRGKIT 255 (313)
T ss_pred ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC----CeeeeeecCCCcceeecCCCcccccccc
Confidence 0223467999999998763 2 23333 3667777632 677888888888655333310
Q ss_pred ------ChhhhhHHHHHHHHHHHHHHHHhhhCC
Q 024721 237 ------DTFAVNSAAEAHEDMINWFEKHVKCDK 263 (263)
Q Consensus 237 ------~~~~~~~~~~~~~~~~~fl~~~l~~~~ 263 (263)
.......++.+...+..||+.+|..|+
T Consensus 256 ~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~~ 288 (313)
T PLN00021 256 GCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGDT 288 (313)
T ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHhcCch
Confidence 011124577788899999999998763
No 60
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.72 E-value=1.1e-16 Score=126.35 Aligned_cols=137 Identities=24% Similarity=0.351 Sum_probs=92.4
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEecCCCCC-------------------------
Q 024721 125 EDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT------------------------- 175 (263)
Q Consensus 125 ~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~~------------------------- 175 (263)
+.+..+++||.++ +.++|+++|.|.||-+++.+| ..+.|+++|+++|+...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 5678899999987 457999999999999999988 55799999998877410
Q ss_pred ------------------------hhhhhcccccEEEEecCCCCCCChHHH-HHHHHHHHcCCCC-ceeEEEcCCCCccc
Q 024721 176 ------------------------EDEIKVVKVPIAVLGAERDNGLPPAQM-KRFDEILYAKPKF-DHLVKTYPGVCHGW 229 (263)
Q Consensus 176 ------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~-~~~~~~l~~~~~~-~~~~~~~~g~~H~~ 229 (263)
.-.+.++++|+|++.|++|.++|.... +.+.+.|+.+... +.++..||++||.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred ecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 013567899999999999999997664 4577778543322 47889999999999
Q ss_pred cccCCCCC------------------hhhhhHHHHHHHHHHHHHHHHhhh
Q 024721 230 TVRYFVND------------------TFAVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 230 ~~~~~~~~------------------~~~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
..++.+.. ..+.++.++.|+.+++||+++|+.
T Consensus 164 ~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~~ 213 (213)
T PF08840_consen 164 EPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLGQ 213 (213)
T ss_dssp -STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred cCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 76654321 123567899999999999999863
No 61
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.72 E-value=5.5e-16 Score=130.41 Aligned_cols=180 Identities=22% Similarity=0.361 Sum_probs=114.0
Q ss_pred eeEEEeCCCCCC-eeEEEEecccC-CCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccccc
Q 024721 49 LKAYVTGPPHSK-KAVLMISDIYG-DEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED 126 (263)
Q Consensus 49 ~~~~~~~~~~~~-~~vv~~h~~~g-~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (263)
+.+|+..|++.+ .|+|++.+|.. ...+++..+.++|+.+|++++++|+ +|.|.+...+ -+. +.-.-
T Consensus 177 I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDm-PG~G~s~~~~--------l~~---D~~~l 244 (411)
T PF06500_consen 177 IPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDM-PGQGESPKWP--------LTQ---DSSRL 244 (411)
T ss_dssp EEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE---TTSGGGTTT---------S-S----CCHH
T ss_pred EEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEcc-CCCcccccCC--------CCc---CHHHH
Confidence 889988887544 35666666665 4444556667889999999999999 5665332110 011 11234
Q ss_pred HHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh--cCCCccEEEEecCCCCC--------------------------
Q 024721 127 AKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA--SNQDVQAAVLLHPSNVT-------------------------- 175 (263)
Q Consensus 127 ~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a--~~~~i~~~v~~~~~~~~-------------------------- 175 (263)
..++++++... |.+||+++|.|+||.++.++| .+++++++|+..+....
T Consensus 245 ~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~rlG~~ 324 (411)
T PF06500_consen 245 HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASRLGMA 324 (411)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHHCT-S
T ss_pred HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHHhCCc
Confidence 56778888776 677999999999999999988 35799999998876411
Q ss_pred ------------------hhhh--hcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCC-ccccccCC
Q 024721 176 ------------------EDEI--KVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVC-HGWTVRYF 234 (263)
Q Consensus 176 ------------------~~~~--~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~-H~~~~~~~ 234 (263)
..-+ .+..+|+|.+++++|+++|.++.+.+.+. +. +.+...++... |
T Consensus 325 ~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~--s~---~gk~~~~~~~~~~------- 392 (411)
T PF06500_consen 325 AVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES--ST---DGKALRIPSKPLH------- 392 (411)
T ss_dssp CE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT--BT---T-EEEEE-SSSHH-------
T ss_pred cCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc--CC---CCceeecCCCccc-------
Confidence 1123 55678999999999999999988765444 32 33444554322 3
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHHh
Q 024721 235 VNDTFAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~fl~~~l 259 (263)
..-++....+.+||++.|
T Consensus 393 -------~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 393 -------MGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp -------HHHHHHHHHHHHHHHHHH
T ss_pred -------cchHHHHHHHHHHHHHhc
Confidence 224688999999999876
No 62
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.71 E-value=1.6e-15 Score=114.95 Aligned_cols=184 Identities=18% Similarity=0.250 Sum_probs=134.4
Q ss_pred eeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHH-hCCCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCcccccc
Q 024721 49 LKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVA-GAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYED 126 (263)
Q Consensus 49 ~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~-~~G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (263)
++.|+-..+.+.|.++++|+..|.- .+...+++.+- +.+..|+.++|| .|.+ .+. .+.+...-|
T Consensus 67 L~a~~~~~E~S~pTlLyfh~NAGNm-Ghr~~i~~~fy~~l~mnv~ivsYRGYG~S--~Gs-----------psE~GL~lD 132 (300)
T KOG4391|consen 67 LDAYLMLSESSRPTLLYFHANAGNM-GHRLPIARVFYVNLKMNVLIVSYRGYGKS--EGS-----------PSEEGLKLD 132 (300)
T ss_pred EeeeeecccCCCceEEEEccCCCcc-cchhhHHHHHHHHcCceEEEEEeeccccC--CCC-----------ccccceecc
Confidence 7788877677788899999776643 23445666544 459999999996 3432 111 112345579
Q ss_pred HHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhhcC--CCccEEEEecCCC---------------------------C
Q 024721 127 AKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSN---------------------------V 174 (263)
Q Consensus 127 ~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~---------------------------~ 174 (263)
.+++++++.++ +.+++++.|.|.||..++.+|+. +++.++++=.... .
T Consensus 133 s~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~ 212 (300)
T KOG4391|consen 133 SEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWL 212 (300)
T ss_pred HHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhhHHHHHHHHhhhc
Confidence 99999999886 67899999999999999998844 5888887733211 0
Q ss_pred ChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHH
Q 024721 175 TEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINW 254 (263)
Q Consensus 175 ~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~f 254 (263)
+.......+.|.|++.|.+|+++|+....++++..+++ .+++..||++.|.=+.- -+--++.+.+|
T Consensus 213 S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~---~Krl~eFP~gtHNDT~i-----------~dGYfq~i~dF 278 (300)
T KOG4391|consen 213 SYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR---TKRLAEFPDGTHNDTWI-----------CDGYFQAIEDF 278 (300)
T ss_pred chhhhccccCceEEeecCccccCCcHHHHHHHHhCchh---hhhheeCCCCccCceEE-----------eccHHHHHHHH
Confidence 11233445789999999999999999999999998544 68899999999954322 24577888999
Q ss_pred HHHHhh
Q 024721 255 FEKHVK 260 (263)
Q Consensus 255 l~~~l~ 260 (263)
|.+...
T Consensus 279 laE~~~ 284 (300)
T KOG4391|consen 279 LAEVVK 284 (300)
T ss_pred HHHhcc
Confidence 987654
No 63
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.71 E-value=1.9e-15 Score=130.54 Aligned_cols=181 Identities=18% Similarity=0.160 Sum_probs=115.6
Q ss_pred CCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccccc-HHHHHHHHH
Q 024721 57 PHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED-AKPVIAALK 135 (263)
Q Consensus 57 ~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~l~ 135 (263)
++.+|+||++||+.+.. ..|....+.|++ +|.|+++|++ |.|.+... .... .+.....+. +..+.+++.
T Consensus 102 ~~~~p~vvllHG~~~~~-~~~~~~~~~L~~-~~~vi~~D~r-G~G~S~~~-~~~~------~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQ-GFFFRNFDALAS-RFRVIAIDQL-GWGGSSRP-DFTC------KSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred CCCCCEEEEECCCCcch-hHHHHHHHHHHh-CCEEEEECCC-CCCCCCCC-Cccc------ccHHHHHHHHHHHHHHHHH
Confidence 34557899999876654 456667788876 5999999996 33322111 0000 000111111 223334555
Q ss_pred hcCCCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCCC--------------------------------------
Q 024721 136 EKGVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNVT-------------------------------------- 175 (263)
Q Consensus 136 ~~~~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~~-------------------------------------- 175 (263)
..+.++++++||||||.+++.+|. ++ +++++|++.+....
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 251 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRG 251 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHh
Confidence 557779999999999999999873 33 67777776432100
Q ss_pred ------------------------------------------------------------------hhhhhcccccEEEE
Q 024721 176 ------------------------------------------------------------------EDEIKVVKVPIAVL 189 (263)
Q Consensus 176 ------------------------------------------------------------------~~~~~~~~~p~l~i 189 (263)
...+.++++|++++
T Consensus 252 ~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI 331 (402)
T PLN02894 252 LGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFI 331 (402)
T ss_pred ccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEE
Confidence 00134468899999
Q ss_pred ecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhhC
Q 024721 190 GAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKCD 262 (263)
Q Consensus 190 ~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 262 (263)
+|++|.+.+ ...+.+.+.+ +...++++++++||....+ ..+++.+.+.+|++.++..+
T Consensus 332 ~G~~D~i~~-~~~~~~~~~~----~~~~~~~~i~~aGH~~~~E----------~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 332 YGRHDWMNY-EGAVEARKRM----KVPCEIIRVPQGGHFVFLD----------NPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred EeCCCCCCc-HHHHHHHHHc----CCCCcEEEeCCCCCeeecc----------CHHHHHHHHHHHHHHhccCC
Confidence 999998765 4444554443 1247899999999976543 34688888898888887654
No 64
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.71 E-value=8.8e-16 Score=128.28 Aligned_cols=188 Identities=15% Similarity=0.118 Sum_probs=118.3
Q ss_pred eEEeeCCeeEEEeCCCC-CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC
Q 024721 42 TVTELGGLKAYVTGPPH-SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 120 (263)
Q Consensus 42 ~~~~~~~~~~~~~~~~~-~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (263)
.+...++.+.++...+. .+++||++||+.+... ...+...+...+|.|+++|++ |.|.+..... . ...+.
T Consensus 8 ~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~--~~~~~~~~~~~~~~vi~~D~~-G~G~S~~~~~-~-----~~~~~ 78 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGT--DPGCRRFFDPETYRIVLFDQR-GCGKSTPHAC-L-----EENTT 78 (306)
T ss_pred eEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCC--CHHHHhccCccCCEEEEECCC-CCCCCCCCCC-c-----ccCCH
Confidence 44444566665544332 2567999999876542 234445555568999999996 4332221100 0 01122
Q ss_pred ccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCC-------------------------
Q 024721 121 DKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSN------------------------- 173 (263)
Q Consensus 121 ~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~------------------------- 173 (263)
.+..+|+..+++.+ +.+++.++||||||.+++.++ ..+ +++++|+..+..
T Consensus 79 ~~~~~dl~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (306)
T TIGR01249 79 WDLVADIEKLREKL---GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRF 155 (306)
T ss_pred HHHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHH
Confidence 33445555555444 567899999999999999987 333 566666543110
Q ss_pred --------C---------------C----------------------------------------h--------------
Q 024721 174 --------V---------------T----------------------------------------E-------------- 176 (263)
Q Consensus 174 --------~---------------~----------------------------------------~-------------- 176 (263)
. . .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (306)
T TIGR01249 156 MDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDV 235 (306)
T ss_pred hhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcC
Confidence 0 0 0
Q ss_pred -----hhhhcc-cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHH
Q 024721 177 -----DEIKVV-KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHED 250 (263)
Q Consensus 177 -----~~~~~~-~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~ 250 (263)
..+.++ ++|+|+++|++|.++|.+..+.+.+.++ +.++++++++||.... ++..+.
T Consensus 236 ~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~-------------~~~~~~ 297 (306)
T TIGR01249 236 ENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-----EAELKVTNNAGHSAFD-------------PNNLAA 297 (306)
T ss_pred chHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCCCCC-------------hHHHHH
Confidence 001234 5899999999999999998888888773 5789999999997642 245566
Q ss_pred HHHHHHHHh
Q 024721 251 MINWFEKHV 259 (263)
Q Consensus 251 ~~~fl~~~l 259 (263)
+.+|+...|
T Consensus 298 i~~~~~~~~ 306 (306)
T TIGR01249 298 LVHALETYL 306 (306)
T ss_pred HHHHHHHhC
Confidence 777776543
No 65
>PRK11071 esterase YqiA; Provisional
Probab=99.71 E-value=4.9e-16 Score=120.54 Aligned_cols=151 Identities=15% Similarity=0.161 Sum_probs=103.7
Q ss_pred eeEEEEecccCCCchhhH--HHHHHHHhC--CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 61 KAVLMISDIYGDEPPIYR--SVADKVAGA--GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~--~~~~~l~~~--G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
|+||++||..++.. .+. .+.+.+.+. +|.|+++|++ |.+ ++..+++..+++ +
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~-g~~-------------------~~~~~~l~~l~~---~ 57 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLP-PYP-------------------ADAAELLESLVL---E 57 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCC-CCH-------------------HHHHHHHHHHHH---H
Confidence 46888888777653 343 345666653 7999999994 321 112233333333 3
Q ss_pred cCCCeEEEEEEeccHHHHHHhhcCCCccEEEEecCCCCC-----------------------hh--------hhh--ccc
Q 024721 137 KGVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT-----------------------ED--------EIK--VVK 183 (263)
Q Consensus 137 ~~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~-----------------------~~--------~~~--~~~ 183 (263)
.+.+++.++|||+||.+++.+|.....+ +++++|.... .. ... ...
T Consensus 58 ~~~~~~~lvG~S~Gg~~a~~~a~~~~~~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~ 136 (190)
T PRK11071 58 HGGDPLGLVGSSLGGYYATWLSQCFMLP-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESP 136 (190)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHHcCCC-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCCh
Confidence 3667999999999999999988543334 4666665431 00 011 245
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 184 VPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 184 ~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
+|+++++|++|+++|.+.+.++++.. +.+.++|++|.|.. .++.++.+.+||+
T Consensus 137 ~~v~iihg~~De~V~~~~a~~~~~~~--------~~~~~~ggdH~f~~------------~~~~~~~i~~fl~ 189 (190)
T PRK11071 137 DLIWLLQQTGDEVLDYRQAVAYYAAC--------RQTVEEGGNHAFVG------------FERYFNQIVDFLG 189 (190)
T ss_pred hhEEEEEeCCCCcCCHHHHHHHHHhc--------ceEEECCCCcchhh------------HHHhHHHHHHHhc
Confidence 68899999999999999998888753 35577999999943 3688899999985
No 66
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.70 E-value=2.6e-15 Score=128.25 Aligned_cols=189 Identities=20% Similarity=0.184 Sum_probs=129.3
Q ss_pred EEeeCCeeEEEeCCC-CCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCc
Q 024721 43 VTELGGLKAYVTGPP-HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTD 121 (263)
Q Consensus 43 ~~~~~~~~~~~~~~~-~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 121 (263)
....++++..+...+ ..+++||++||+.+.. ..|+.+++.|++ +|.|+++|++ |.|.+..... . ....++.+
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~-~~w~~~~~~L~~-~~~Via~Dlp-G~G~S~~p~~-~---~~~~ys~~ 181 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQA-YSYRKVLPVLSK-NYHAIAFDWL-GFGFSDKPQP-G---YGFNYTLD 181 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCH-HHHHHHHHHHhc-CCEEEEECCC-CCCCCCCCcc-c---ccccCCHH
Confidence 445667776555333 2357899999876554 577888999975 7999999996 3332221110 0 00123445
Q ss_pred cccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCC-------------------------
Q 024721 122 KGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNV------------------------- 174 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~------------------------- 174 (263)
.+.+|+..+++.+ +.+++.++|||+||.+++.+|.. | +++++|++.+...
T Consensus 182 ~~a~~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~ 258 (383)
T PLN03084 182 EYVSSLESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQD 258 (383)
T ss_pred HHHHHHHHHHHHh---CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcc
Confidence 5667777777665 56789999999999999998843 3 7888888764410
Q ss_pred -----------------C--------------------h----h-----------hh------hcccccEEEEecCCCCC
Q 024721 175 -----------------T--------------------E----D-----------EI------KVVKVPIAVLGAERDNG 196 (263)
Q Consensus 175 -----------------~--------------------~----~-----------~~------~~~~~p~l~i~G~~D~~ 196 (263)
. . . .+ ..+++|+|+++|++|.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~ 338 (383)
T PLN03084 259 PLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRW 338 (383)
T ss_pred hHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCC
Confidence 0 0 0 00 13578999999999999
Q ss_pred CChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 197 LPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
++.+..+.+.+.. +.++.++++++|.... +..+++.+.+.+||++
T Consensus 339 v~~~~~~~~a~~~------~a~l~vIp~aGH~~~~----------E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 339 LNYDGVEDFCKSS------QHKLIELPMAGHHVQE----------DCGEELGGIISGILSK 383 (383)
T ss_pred cCHHHHHHHHHhc------CCeEEEECCCCCCcch----------hCHHHHHHHHHHHhhC
Confidence 9988777666543 4688999999997754 3357888889999863
No 67
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.69 E-value=1.9e-15 Score=129.55 Aligned_cols=181 Identities=22% Similarity=0.310 Sum_probs=117.8
Q ss_pred eeCCeeEEEeCCC-CCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccc
Q 024721 45 ELGGLKAYVTGPP-HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG 123 (263)
Q Consensus 45 ~~~~~~~~~~~~~-~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 123 (263)
..++...++.... +.+++||++||+.+.. ..|..+.+.|.+ +|.|+++|++ |.+.+.... ...+.+..
T Consensus 115 ~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~-~~~v~~~d~~-g~G~s~~~~--------~~~~~~~~ 183 (371)
T PRK14875 115 RIGGRTVRYLRLGEGDGTPVVLIHGFGGDL-NNWLFNHAALAA-GRPVIALDLP-GHGASSKAV--------GAGSLDEL 183 (371)
T ss_pred eEcCcEEEEecccCCCCCeEEEECCCCCcc-chHHHHHHHHhc-CCEEEEEcCC-CCCCCCCCC--------CCCCHHHH
Confidence 3444444433322 3357788999766654 567788888875 4999999995 443221110 01112223
Q ss_pred cccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCCC--------------------------
Q 024721 124 YEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNVT-------------------------- 175 (263)
Q Consensus 124 ~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~~-------------------------- 175 (263)
.+++.. .+...+..+++++|||+||.+++.+|. .+ ++++++++++....
T Consensus 184 ~~~~~~---~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (371)
T PRK14875 184 AAAVLA---FLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLEL 260 (371)
T ss_pred HHHHHH---HHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHH
Confidence 333333 334446778999999999999999874 34 88999887654100
Q ss_pred ----------------------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHH
Q 024721 176 ----------------------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEIL 209 (263)
Q Consensus 176 ----------------------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l 209 (263)
...+.++++|+|+++|++|.++|.+..+.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~--- 337 (371)
T PRK14875 261 LFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP--- 337 (371)
T ss_pred HhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc---
Confidence 0123457899999999999999976654321
Q ss_pred HcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 210 YAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 210 ~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
. ..++.+++++||....+ ..+++.+.+.+||++
T Consensus 338 -~----~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 338 -D----GVAVHVLPGAGHMPQME----------AAADVNRLLAEFLGK 370 (371)
T ss_pred -C----CCeEEEeCCCCCChhhh----------CHHHHHHHHHHHhcc
Confidence 1 47889999999977542 246777888888875
No 68
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.69 E-value=9.4e-16 Score=131.68 Aligned_cols=187 Identities=17% Similarity=0.223 Sum_probs=120.8
Q ss_pred CeeEEEEecccCCCch------------hhHHHH---HHHHhCCCEEEeecCCCCCC-C-CCCCCC-cchhhh---hhcC
Q 024721 60 KKAVLMISDIYGDEPP------------IYRSVA---DKVAGAGFLVVAPDFFHGDA-A-NPSNPK-YDKDTW---RKNH 118 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~------------~~~~~~---~~l~~~G~~vv~~d~~~g~~-~-~~~~~~-~~~~~~---~~~~ 118 (263)
+|+||++||..+.... +|..+. ..|...+|.|+++|++++.+ . .+.+.. .....+ ...+
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 5789999988776532 244443 13435689999999964221 1 111100 000001 0123
Q ss_pred CCccccccHHHHHHHHHhcCCCe-EEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCCC--------------------
Q 024721 119 TTDKGYEDAKPVIAALKEKGVSA-VGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNVT-------------------- 175 (263)
Q Consensus 119 ~~~~~~~d~~~~~~~l~~~~~~~-i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~~-------------------- 175 (263)
+.+.+.+|+..+++.+ +.++ +.++||||||.+++.+|. .| +++++|++.+....
T Consensus 128 ~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~ 204 (379)
T PRK00175 128 TIRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPD 204 (379)
T ss_pred CHHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCC
Confidence 4455666666666665 6667 589999999999999873 33 77777765432100
Q ss_pred --------------------------------------------------------------------------------
Q 024721 176 -------------------------------------------------------------------------------- 175 (263)
Q Consensus 176 -------------------------------------------------------------------------------- 175 (263)
T Consensus 205 ~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~ 284 (379)
T PRK00175 205 WHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYL 284 (379)
T ss_pred CCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHH
Confidence
Q ss_pred -----------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcC-CCCccccccCCCCC
Q 024721 176 -----------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYP-GVCHGWTVRYFVND 237 (263)
Q Consensus 176 -----------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-g~~H~~~~~~~~~~ 237 (263)
...+.++++|+|+++|++|.++|++..+.+.+.++. .+.+.++.+++ ++||....
T Consensus 285 ~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~-a~~~~~l~~i~~~~GH~~~l------ 357 (379)
T PRK00175 285 TRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLA-AGADVSYAEIDSPYGHDAFL------ 357 (379)
T ss_pred HHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHh-cCCCeEEEEeCCCCCchhHh------
Confidence 001235688999999999999999999999999842 33345777774 89997755
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhh
Q 024721 238 TFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 238 ~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
+..+++.+.+.+||++.-.
T Consensus 358 ----e~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 358 ----LDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred ----cCHHHHHHHHHHHHHhhhh
Confidence 2356888999999987543
No 69
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.68 E-value=1.1e-15 Score=130.20 Aligned_cols=183 Identities=17% Similarity=0.230 Sum_probs=115.1
Q ss_pred CCeeEEEEecccCCCch----------hhHHHH---HHHHhCCCEEEeecCCC-CCCCCCC-CC-Ccchhhhh---hcCC
Q 024721 59 SKKAVLMISDIYGDEPP----------IYRSVA---DKVAGAGFLVVAPDFFH-GDAANPS-NP-KYDKDTWR---KNHT 119 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~----------~~~~~~---~~l~~~G~~vv~~d~~~-g~~~~~~-~~-~~~~~~~~---~~~~ 119 (263)
.+++||++||..++... +|..+. ..|.+.+|.|+++|+++ +.+.+.. .. +.+ ..+. ..++
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~-~~~~~~~~~~~ 108 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGG-RPYGSDFPLIT 108 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCC-CcCCCCCCCCc
Confidence 34678888887764321 355553 35656789999999964 1322211 10 001 0010 1233
Q ss_pred CccccccHHHHHHHHHhcCCCe-EEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC---------------------
Q 024721 120 TDKGYEDAKPVIAALKEKGVSA-VGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT--------------------- 175 (263)
Q Consensus 120 ~~~~~~d~~~~~~~l~~~~~~~-i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~--------------------- 175 (263)
.+.+.+|+..+++.+ +.++ +.++||||||.+++.+| ..| +++++|++.+....
T Consensus 109 ~~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (351)
T TIGR01392 109 IRDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNEVQRQAILADPNW 185 (351)
T ss_pred HHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHHHHHHHHHhCCCC
Confidence 445555666655544 6677 99999999999999987 333 67777765432100
Q ss_pred --------------------------------------------------------------------------------
Q 024721 176 -------------------------------------------------------------------------------- 175 (263)
Q Consensus 176 -------------------------------------------------------------------------------- 175 (263)
T Consensus 186 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 265 (351)
T TIGR01392 186 NDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLT 265 (351)
T ss_pred CCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHH
Confidence
Q ss_pred ---------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeE-EEcCCCCccccccCCCCChh
Q 024721 176 ---------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLV-KTYPGVCHGWTVRYFVNDTF 239 (263)
Q Consensus 176 ---------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~g~~H~~~~~~~~~~~~ 239 (263)
...++++++|+|+++|++|.++|++..+.+.+.++. ....+++ .+++++||....
T Consensus 266 ~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~-~~~~v~~~~i~~~~GH~~~l-------- 336 (351)
T TIGR01392 266 RALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA-AGLRVTYVEIESPYGHDAFL-------- 336 (351)
T ss_pred HHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh-cCCceEEEEeCCCCCcchhh--------
Confidence 011234578999999999999999999999999853 2111222 256789997754
Q ss_pred hhhHHHHHHHHHHHHHH
Q 024721 240 AVNSAAEAHEDMINWFE 256 (263)
Q Consensus 240 ~~~~~~~~~~~~~~fl~ 256 (263)
+..+++.+.+.+||+
T Consensus 337 --e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 337 --VETDQVEELIRGFLR 351 (351)
T ss_pred --cCHHHHHHHHHHHhC
Confidence 235688888888874
No 70
>COG0400 Predicted esterase [General function prediction only]
Probab=99.68 E-value=1.7e-15 Score=117.59 Aligned_cols=173 Identities=18% Similarity=0.197 Sum_probs=114.3
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhc-----CCCccccccHHHHHHHHH
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN-----HTTDKGYEDAKPVIAALK 135 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~l~ 135 (263)
|.||++||..++. ..+..+.+.+.. .+.++.+.-+ .... ....|+.. ++.+....+...+.+.+.
T Consensus 19 ~~iilLHG~Ggde-~~~~~~~~~~~P-~~~~is~rG~---v~~~-----g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 19 PLLILLHGLGGDE-LDLVPLPELILP-NATLVSPRGP---VAEN-----GGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred cEEEEEecCCCCh-hhhhhhhhhcCC-CCeEEcCCCC---cccc-----CcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 4466666655443 444555544443 3666666331 1100 00111111 122333344444444443
Q ss_pred hc------CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCChhh-h-hcccccEEEEecCCCCCCChHHHHHH
Q 024721 136 EK------GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTEDE-I-KVVKVPIAVLGAERDNGLPPAQMKRF 205 (263)
Q Consensus 136 ~~------~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~~~~-~-~~~~~p~l~i~G~~D~~~~~~~~~~~ 205 (263)
.. +.++++++|+|.||.+++.+. ..+ .++++++++|....... . ..-..|+|+++|+.|+++|....+++
T Consensus 89 ~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~~~~~~pill~hG~~Dpvvp~~~~~~l 168 (207)
T COG0400 89 ELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLPDLAGTPILLSHGTEDPVVPLALAEAL 168 (207)
T ss_pred HHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccccccCCCeEEEeccCcCCccCHHHHHHH
Confidence 32 568999999999999999977 333 79999999988765432 2 23468999999999999999999999
Q ss_pred HHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHh
Q 024721 206 DEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 206 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l 259 (263)
.+.|. +.|.+++..+++ .||... .+..+.+.+|+.+.+
T Consensus 169 ~~~l~-~~g~~v~~~~~~-~GH~i~--------------~e~~~~~~~wl~~~~ 206 (207)
T COG0400 169 AEYLT-ASGADVEVRWHE-GGHEIP--------------PEELEAARSWLANTL 206 (207)
T ss_pred HHHHH-HcCCCEEEEEec-CCCcCC--------------HHHHHHHHHHHHhcc
Confidence 99994 477799999999 699874 467777888988754
No 71
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.67 E-value=3.3e-15 Score=120.83 Aligned_cols=195 Identities=19% Similarity=0.305 Sum_probs=131.5
Q ss_pred eeEEEeC-CCCC-CeeEEEEecccCCC-chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccc
Q 024721 49 LKAYVTG-PPHS-KKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYE 125 (263)
Q Consensus 49 ~~~~~~~-~~~~-~~~vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (263)
+...+.. |... .|.||++||..|+. .++.+.+++.+.++||.||++++| |++..+...+.- .-....+
T Consensus 62 ~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~R-gcs~~~n~~p~~--------yh~G~t~ 132 (345)
T COG0429 62 IDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFR-GCSGEANTSPRL--------YHSGETE 132 (345)
T ss_pred EEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecc-cccCCcccCcce--------ecccchh
Confidence 4444444 3333 46788999887743 567788999999999999999995 554443322111 1134458
Q ss_pred cHHHHHHHHHhc-CCCeEEEEEEeccH-HHHHHhhcC---CCccEEEEec-CCC--------------------------
Q 024721 126 DAKPVIAALKEK-GVSAVGAAGFCWGG-KVAVKLASN---QDVQAAVLLH-PSN-------------------------- 173 (263)
Q Consensus 126 d~~~~~~~l~~~-~~~~i~~~G~S~Gg-~~a~~~a~~---~~i~~~v~~~-~~~-------------------------- 173 (263)
|+..+++++++. .+.++..+|+|+|| +++..++.+ ..+.+.+.++ |..
T Consensus 133 D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~ 212 (345)
T COG0429 133 DIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLK 212 (345)
T ss_pred HHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHH
Confidence 999999999886 67799999999999 555556643 3555555433 321
Q ss_pred ----------------------------------------------------CChhhhhcccccEEEEecCCCCCCChHH
Q 024721 174 ----------------------------------------------------VTEDEIKVVKVPIAVLGAERDNGLPPAQ 201 (263)
Q Consensus 174 ----------------------------------------------------~~~~~~~~~~~p~l~i~G~~D~~~~~~~ 201 (263)
.+...+++|.+|+|+|+..+|++++++.
T Consensus 213 ~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~ 292 (345)
T COG0429 213 RNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEV 292 (345)
T ss_pred HHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhh
Confidence 0124578899999999999999999876
Q ss_pred HHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhh
Q 024721 202 MKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 202 ~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
.......+ ++ ++.+..-+.+||.=....... ...-.+.+.+.+||+..+..
T Consensus 293 iP~~~~~~--np--~v~l~~t~~GGHvGfl~~~~~-----~~~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 293 IPKLQEML--NP--NVLLQLTEHGGHVGFLGGKLL-----HPQMWLEQRILDWLDPFLEA 343 (345)
T ss_pred CCcchhcC--CC--ceEEEeecCCceEEeccCccc-----cchhhHHHHHHHHHHHHHhh
Confidence 65443332 22 577888777888543332221 11237888999999987653
No 72
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.65 E-value=3.4e-15 Score=116.96 Aligned_cols=174 Identities=20% Similarity=0.222 Sum_probs=122.2
Q ss_pred eeEEEeCCCC---CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCC----CCCc-chhhhhhcC--
Q 024721 49 LKAYVTGPPH---SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPS----NPKY-DKDTWRKNH-- 118 (263)
Q Consensus 49 ~~~~~~~~~~---~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~----~~~~-~~~~~~~~~-- 118 (263)
+++|+..|.. +.|.||-+||..|... .+..+. .++..||.|+.+|.| |.+.+.. .+.. +..+|..+.
T Consensus 69 I~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l-~wa~~Gyavf~MdvR-GQg~~~~dt~~~p~~~s~pG~mtrGil 145 (321)
T COG3458 69 IKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDML-HWAVAGYAVFVMDVR-GQGSSSQDTADPPGGPSDPGFMTRGIL 145 (321)
T ss_pred EEEEEEeecccCCccceEEEEeeccCCCC-Cccccc-cccccceeEEEEecc-cCCCccccCCCCCCCCcCCceeEeecc
Confidence 8889888753 3477888888776543 222322 345679999999996 3322211 1111 222222221
Q ss_pred ------CCccccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEecCCCCC-------------
Q 024721 119 ------TTDKGYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNVT------------- 175 (263)
Q Consensus 119 ------~~~~~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~~------------- 175 (263)
-+..-..|+..+++.+... +..||++.|.|+||.+++.++ .+++|+++++.+|....
T Consensus 146 D~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~df~r~i~~~~~~~y 225 (321)
T COG3458 146 DRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFLSDFPRAIELATEGPY 225 (321)
T ss_pred cCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhcccccccccccchhheeecccCcH
Confidence 1133345777777777655 678999999999999999976 67899999999987521
Q ss_pred --------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccc
Q 024721 176 --------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGW 229 (263)
Q Consensus 176 --------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 229 (263)
.+.+.++++|+|+..|-.|+++|+...-.+++++.. .+++.+|+--+|.-
T Consensus 226 dei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~----~K~i~iy~~~aHe~ 301 (321)
T COG3458 226 DEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT----SKTIEIYPYFAHEG 301 (321)
T ss_pred HHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC----CceEEEeecccccc
Confidence 234678899999999999999999999899999843 57788888767744
No 73
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.65 E-value=5.6e-15 Score=116.92 Aligned_cols=153 Identities=16% Similarity=0.176 Sum_probs=98.5
Q ss_pred EEeCCC---CCCeeEEEEecccCCCchhhH---HHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhc---CCCcc
Q 024721 52 YVTGPP---HSKKAVLMISDIYGDEPPIYR---SVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN---HTTDK 122 (263)
Q Consensus 52 ~~~~~~---~~~~~vv~~h~~~g~~~~~~~---~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~---~~~~~ 122 (263)
|++.|+ ++.|.||++||+.+.. ..+. .+.+.+.+.||.|++||++ |.+..... ..|+.. .....
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~-~~~~~~~~~~~~a~~~g~~Vv~Pd~~-g~~~~~~~-----~~~~~~~~~~~~~~ 74 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTA-SAYVIDWGWKAAADRYGFVLVAPEQT-SYNSSNNC-----WDWFFTHHRARGTG 74 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCH-HHHhhhcChHHHHHhCCeEEEecCCc-CccccCCC-----CCCCCccccCCCCc
Confidence 344454 2456788888866543 2232 3455555679999999995 32211000 011111 11123
Q ss_pred ccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCCh-----------------h---
Q 024721 123 GYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTE-----------------D--- 177 (263)
Q Consensus 123 ~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~~-----------------~--- 177 (263)
...|+..+++++.+. +.++++++|||+||.+++.++ .++ .+.+++.+++..... .
T Consensus 75 ~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (212)
T TIGR01840 75 EVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAASVC 154 (212)
T ss_pred cHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHHHH
Confidence 456777888888765 557999999999999999987 444 688888887664210 0
Q ss_pred -h-------hhcccccEEEEecCCCCCCChHHHHHHHHHHHc
Q 024721 178 -E-------IKVVKVPIAVLGAERDNGLPPAQMKRFDEILYA 211 (263)
Q Consensus 178 -~-------~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~ 211 (263)
. ......|++++||++|+++|.+..+++.+.+++
T Consensus 155 ~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 155 RLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred HHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 0 011234578999999999999999999999864
No 74
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.64 E-value=9.6e-15 Score=122.13 Aligned_cols=175 Identities=22% Similarity=0.231 Sum_probs=118.9
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
.+++||++||+.++ ...|+.....|.+. |+.|+++|.+ |.|+.... +.+. .++ ..+.+....+...+.
T Consensus 57 ~~~pvlllHGF~~~-~~~w~~~~~~L~~~~~~~v~aiDl~-G~g~~s~~-~~~~-----~y~---~~~~v~~i~~~~~~~ 125 (326)
T KOG1454|consen 57 DKPPVLLLHGFGAS-SFSWRRVVPLLSKAKGLRVLAIDLP-GHGYSSPL-PRGP-----LYT---LRELVELIRRFVKEV 125 (326)
T ss_pred CCCcEEEeccccCC-cccHhhhccccccccceEEEEEecC-CCCcCCCC-CCCC-----cee---hhHHHHHHHHHHHhh
Confidence 56889999998774 45788888888876 6999999995 43321110 0010 011 112222222333333
Q ss_pred CCCeEEEEEEeccHHHHHHhhc-CC-CccEEE---EecCCCC--------------------------------------
Q 024721 138 GVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAV---LLHPSNV-------------------------------------- 174 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v---~~~~~~~-------------------------------------- 174 (263)
...++.++|||+||.+++.+|. .| .++.++ ...+...
T Consensus 126 ~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (326)
T KOG1454|consen 126 FVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG 205 (326)
T ss_pred cCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh
Confidence 5567999999999999999883 33 778887 3222210
Q ss_pred --------------------------------------------C-----hhhhhccc-ccEEEEecCCCCCCChHHHHH
Q 024721 175 --------------------------------------------T-----EDEIKVVK-VPIAVLGAERDNGLPPAQMKR 204 (263)
Q Consensus 175 --------------------------------------------~-----~~~~~~~~-~p~l~i~G~~D~~~~~~~~~~ 204 (263)
. ...++++. +|+|+++|++|+++|.+.++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~ 285 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEE 285 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHH
Confidence 0 11235555 999999999999999997777
Q ss_pred HHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHh
Q 024721 205 FDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 205 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l 259 (263)
+.+.++ +.++.+++++||.-.. +..+++.+.+..|++.+.
T Consensus 286 ~~~~~p-----n~~~~~I~~~gH~~h~----------e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 286 LKKKLP-----NAELVEIPGAGHLPHL----------ERPEEVAALLRSFIARLR 325 (326)
T ss_pred HHhhCC-----CceEEEeCCCCccccc----------CCHHHHHHHHHHHHHHhc
Confidence 776652 6899999999997655 336789999999998753
No 75
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.63 E-value=1.6e-14 Score=142.86 Aligned_cols=182 Identities=12% Similarity=0.181 Sum_probs=119.8
Q ss_pred CeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCC
Q 024721 60 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGV 139 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 139 (263)
+++||++||+.+.. ..|..+.+.|.+ +|.|+++|++ |.|.+..........-...++.+...+++..+++.+ +.
T Consensus 1371 ~~~vVllHG~~~s~-~~w~~~~~~L~~-~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---~~ 1444 (1655)
T PLN02980 1371 GSVVLFLHGFLGTG-EDWIPIMKAISG-SARCISIDLP-GHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---TP 1444 (1655)
T ss_pred CCeEEEECCCCCCH-HHHHHHHHHHhC-CCEEEEEcCC-CCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---CC
Confidence 56889999887775 467888998875 5999999995 433322110000000000122233444555554443 66
Q ss_pred CeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC--C----------------------------------------
Q 024721 140 SAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV--T---------------------------------------- 175 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~--~---------------------------------------- 175 (263)
+++.++||||||.+++.++ .+| ++++++++.+... .
T Consensus 1445 ~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 1524 (1655)
T PLN02980 1445 GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLR 1524 (1655)
T ss_pred CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhc
Confidence 7999999999999999988 333 8888887654310 0
Q ss_pred ------------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcC-------
Q 024721 176 ------------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAK------- 212 (263)
Q Consensus 176 ------------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~------- 212 (263)
...+.++++|+|+++|++|..++ +..+++.+.+...
T Consensus 1525 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~ 1603 (1655)
T PLN02980 1525 NHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDK 1603 (1655)
T ss_pred cCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccc
Confidence 01245568899999999999875 5566677666421
Q ss_pred CCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 213 PKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 213 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
+....++++++++||.... +..+++.+.+.+||++.
T Consensus 1604 ~~~~a~lvvI~~aGH~~~l----------E~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1604 GKEIIEIVEIPNCGHAVHL----------ENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred cccceEEEEECCCCCchHH----------HCHHHHHHHHHHHHHhc
Confidence 0013689999999997765 33568899999999864
No 76
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.62 E-value=9.5e-14 Score=116.35 Aligned_cols=183 Identities=24% Similarity=0.251 Sum_probs=129.8
Q ss_pred eeEEEeCC--CC--CCeeEEEEeccc---CCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCc
Q 024721 49 LKAYVTGP--PH--SKKAVLMISDIY---GDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTD 121 (263)
Q Consensus 49 ~~~~~~~~--~~--~~~~vv~~h~~~---g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 121 (263)
+++.++.| .. ..|.||++|||. |........+...++..|+.|+++|||-.. .+++.
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP----------------e~~~p 127 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP----------------EHPFP 127 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC----------------CCCCC
Confidence 55666666 22 357788888774 232222244555666679999999996211 12345
Q ss_pred cccccHHHHHHHHHhc------CCCeEEEEEEeccHHHHHHhh---cC---CCccEEEEecCCCCC--------------
Q 024721 122 KGYEDAKPVIAALKEK------GVSAVGAAGFCWGGKVAVKLA---SN---QDVQAAVLLHPSNVT-------------- 175 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~------~~~~i~~~G~S~Gg~~a~~~a---~~---~~i~~~v~~~~~~~~-------------- 175 (263)
..++|+.++++|+.++ ++++|+++|+|.||.+++.++ ++ +..++.++++|+...
T Consensus 128 ~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~ 207 (312)
T COG0657 128 AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEAD 207 (312)
T ss_pred chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCcc
Confidence 6678999999999865 478999999999999999987 22 367888888876310
Q ss_pred ----------------------------h---hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCC
Q 024721 176 ----------------------------E---DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPG 224 (263)
Q Consensus 176 ----------------------------~---~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g 224 (263)
+ ..+.. -.|+++++|+.|.+.+ +.+.+.++| .+.|..++++.+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L-~~agv~~~~~~~~g 283 (312)
T COG0657 208 LLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERL-RAAGVPVELRVYPG 283 (312)
T ss_pred ccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHH-HHcCCeEEEEEeCC
Confidence 0 00122 3689999999999887 677888898 55788999999999
Q ss_pred CCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 225 VCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 225 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
..|+|..... ....+.+..+.+||++.
T Consensus 284 ~~H~f~~~~~-------~~a~~~~~~~~~~l~~~ 310 (312)
T COG0657 284 MIHGFDLLTG-------PEARSALRQIAAFLRAA 310 (312)
T ss_pred cceeccccCc-------HHHHHHHHHHHHHHHHh
Confidence 9999943322 23556688888888744
No 77
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.62 E-value=1.2e-14 Score=123.84 Aligned_cols=197 Identities=17% Similarity=0.276 Sum_probs=107.2
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCC-CC--CCCCc-chh----h-----hh--hcC-------
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAA-NP--SNPKY-DKD----T-----WR--KNH------- 118 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~-~~--~~~~~-~~~----~-----~~--~~~------- 118 (263)
-|||++.||.++....|..++..||++||.|+++|++.|+.. .. .+... ... . +. ...
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 345555555554457889999999999999999999866421 10 00000 000 0 00 000
Q ss_pred ----CCccccccHHHHHHHHHhc-----------------------CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEec
Q 024721 119 ----TTDKGYEDAKPVIAALKEK-----------------------GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLH 170 (263)
Q Consensus 119 ----~~~~~~~d~~~~~~~l~~~-----------------------~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~ 170 (263)
..+....|+..+++.+.+. +.++|+++|||+||..++.++ .+.++++.|++.
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I~LD 259 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGILLD 259 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEEEeC
Confidence 0022334567777776531 245899999999999999976 557999999999
Q ss_pred CCCCCh--hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCCh----------
Q 024721 171 PSNVTE--DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDT---------- 238 (263)
Q Consensus 171 ~~~~~~--~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~---------- 238 (263)
|+..+. .....++.|+|+|+.+. +.-......+.+.. . .+....+..+.|..|.-..+.....+
T Consensus 260 ~W~~Pl~~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~-~-~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~ 335 (379)
T PF03403_consen 260 PWMFPLGDEIYSKIPQPLLFINSES--FQWWENIFRMKKVI-S-NNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLK 335 (379)
T ss_dssp ---TTS-GGGGGG--S-EEEEEETT--T--HHHHHHHHTT----TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS
T ss_pred CcccCCCcccccCCCCCEEEEECcc--cCChhhHHHHHHHh-c-cCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccc
Confidence 998753 34577899999998864 22333444444433 2 23367788899999976433222111
Q ss_pred --hh-hhHHHHHHHHHHHHHHHHhhh
Q 024721 239 --FA-VNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 239 --~~-~~~~~~~~~~~~~fl~~~l~~ 261 (263)
.+ ..+.+...+.+++||+++|+.
T Consensus 336 g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 336 GSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp -SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred cCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 01 255778888999999999874
No 78
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.58 E-value=4e-13 Score=111.67 Aligned_cols=189 Identities=17% Similarity=0.225 Sum_probs=138.1
Q ss_pred eCCeeEEEeCCCC-----CCeeEEEEecccC----CCchhhHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhh
Q 024721 46 LGGLKAYVTGPPH-----SKKAVLMISDIYG----DEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWR 115 (263)
Q Consensus 46 ~~~~~~~~~~~~~-----~~~~vv~~h~~~g----~~~~~~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~ 115 (263)
.+++.++++.|.. ..|.||++|||.- ...+.|..++..++.+ +..|+.+|||- .+
T Consensus 71 ~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL-AP-------------- 135 (336)
T KOG1515|consen 71 FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL-AP-------------- 135 (336)
T ss_pred CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc-CC--------------
Confidence 4567888877742 3467888887742 2356788889888665 99999999962 11
Q ss_pred hcCCCccccccHHHHHHHHHhc-------CCCeEEEEEEeccHHHHHHhh---c-----CCCccEEEEecCCCCC-----
Q 024721 116 KNHTTDKGYEDAKPVIAALKEK-------GVSAVGAAGFCWGGKVAVKLA---S-----NQDVQAAVLLHPSNVT----- 175 (263)
Q Consensus 116 ~~~~~~~~~~d~~~~~~~l~~~-------~~~~i~~~G~S~Gg~~a~~~a---~-----~~~i~~~v~~~~~~~~----- 175 (263)
.+.+....+|...++.|+.++ |.+||+++|-|.||.+|..+| . .+++++.++++|.+..
T Consensus 136 -Eh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~ 214 (336)
T KOG1515|consen 136 -EHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTE 214 (336)
T ss_pred -CCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCC
Confidence 123345568888888887763 788999999999999999877 1 2489999999998611
Q ss_pred ----------------------------------------hh-----hhhcccc-cEEEEecCCCCCCChHHHHHHHHHH
Q 024721 176 ----------------------------------------ED-----EIKVVKV-PIAVLGAERDNGLPPAQMKRFDEIL 209 (263)
Q Consensus 176 ----------------------------------------~~-----~~~~~~~-p~l~i~G~~D~~~~~~~~~~~~~~l 209 (263)
.. ......+ |+|++..+.|.+. +....+.++|
T Consensus 215 ~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~L 292 (336)
T KOG1515|consen 215 SEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKL 292 (336)
T ss_pred HHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHH
Confidence 00 1112233 5999999999876 5667888999
Q ss_pred HcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 210 YAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 210 ~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
.+.|.+.++..++++.|+|..-.+.. +.+.+..+.+.+|+++.
T Consensus 293 -kk~Gv~v~~~~~e~~~H~~~~~~~~~-----~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 293 -KKAGVEVTLIHYEDGFHGFHILDPSS-----KEAHALMDAIVEFIKSN 335 (336)
T ss_pred -HHcCCeEEEEEECCCeeEEEecCCch-----hhHHHHHHHHHHHHhhc
Confidence 55788888889999999996544331 45788889999999864
No 79
>PRK05855 short chain dehydrogenase; Validated
Probab=99.58 E-value=4e-14 Score=128.26 Aligned_cols=190 Identities=14% Similarity=0.167 Sum_probs=121.0
Q ss_pred eEEeeCCeeEEEeCCC-CCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC
Q 024721 42 TVTELGGLKAYVTGPP-HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 120 (263)
Q Consensus 42 ~~~~~~~~~~~~~~~~-~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (263)
.+...+|.+.++...+ ..+|+||++||+.+.. ..|..+.+.| ..||.|+++|++ |.|.+...... ..++.
T Consensus 6 ~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~-~~w~~~~~~L-~~~~~Vi~~D~~-G~G~S~~~~~~------~~~~~ 76 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNH-EVWDGVAPLL-ADRFRVVAYDVR-GAGRSSAPKRT------AAYTL 76 (582)
T ss_pred EEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchH-HHHHHHHHHh-hcceEEEEecCC-CCCCCCCCCcc------cccCH
Confidence 3445677665554322 2357899999987665 5788899988 568999999995 44433211100 12345
Q ss_pred ccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcCC----CccEEEEecCCCC----------------------
Q 024721 121 DKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPSNV---------------------- 174 (263)
Q Consensus 121 ~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~~---------------------- 174 (263)
+...+|+..+++.+.. ..++.++||||||.+++.++..+ .+..++...+...
T Consensus 77 ~~~a~dl~~~i~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (582)
T PRK05855 77 ARLADDFAAVIDAVSP--DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARA 154 (582)
T ss_pred HHHHHHHHHHHHHhCC--CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHH
Confidence 6667788888877631 23599999999999998776432 2222222110000
Q ss_pred -------------------------------------------C---------------------------hhhhhcccc
Q 024721 175 -------------------------------------------T---------------------------EDEIKVVKV 184 (263)
Q Consensus 175 -------------------------------------------~---------------------------~~~~~~~~~ 184 (263)
. ......+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (582)
T PRK05855 155 LGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDV 234 (582)
T ss_pred HHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccC
Confidence 0 000122689
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 185 PIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 185 p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
|+|+++|++|+++|.+..+.+.+.++ ..++++++ +||....+ ..+++.+.+.+||++.
T Consensus 235 P~lii~G~~D~~v~~~~~~~~~~~~~-----~~~~~~~~-~gH~~~~e----------~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 235 PVQLIVPTGDPYVRPALYDDLSRWVP-----RLWRREIK-AGHWLPMS----------HPQVLAAAVAEFVDAV 292 (582)
T ss_pred ceEEEEeCCCcccCHHHhccccccCC-----cceEEEcc-CCCcchhh----------ChhHHHHHHHHHHHhc
Confidence 99999999999999888777665542 45677777 58977543 2457788888888763
No 80
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.57 E-value=1.1e-13 Score=132.15 Aligned_cols=192 Identities=16% Similarity=0.173 Sum_probs=128.6
Q ss_pred eeCCeeEEEeCCCC-------CCeeEEEEecccCCCchhhHH-----HHHHHHhCCCEEEeecCCCCCCCCCCCCCcchh
Q 024721 45 ELGGLKAYVTGPPH-------SKKAVLMISDIYGDEPPIYRS-----VADKVAGAGFLVVAPDFFHGDAANPSNPKYDKD 112 (263)
Q Consensus 45 ~~~~~~~~~~~~~~-------~~~~vv~~h~~~g~~~~~~~~-----~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~ 112 (263)
+.+-++.+.+.|.. .+++||++|++.... ..|.. +.+.|+++||.|+++|+ |.+..... .
T Consensus 45 ~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~--G~~~~~~~---~-- 116 (994)
T PRK07868 45 SVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDF--GSPDKVEG---G-- 116 (994)
T ss_pred EcCcEEEEEeCCCCccccccCCCCcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcC--CCCChhHc---C--
Confidence 44557888777653 357899999976654 33433 47899999999999996 33211110 0
Q ss_pred hhhhcCCCccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc-C-C-CccEEEEecCC-----------------
Q 024721 113 TWRKNHTTDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS-N-Q-DVQAAVLLHPS----------------- 172 (263)
Q Consensus 113 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~-~-~-~i~~~v~~~~~----------------- 172 (263)
...++.+.+.++..+++.+++...+++.++||||||.+++.++. + + +++.++++...
T Consensus 117 ---~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~ 193 (994)
T PRK07868 117 ---MERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAA 193 (994)
T ss_pred ---ccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhh
Confidence 01222333444555555555555568999999999999988763 3 3 68888762110
Q ss_pred C-------------------------------------------------CC----------h-----------------
Q 024721 173 N-------------------------------------------------VT----------E----------------- 176 (263)
Q Consensus 173 ~-------------------------------------------------~~----------~----------------- 176 (263)
. .+ .
T Consensus 194 ~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~ 273 (994)
T PRK07868 194 AAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQF 273 (994)
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHH
Confidence 0 00 0
Q ss_pred -----------------hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeE-EEcCCCCccccccCCCCCh
Q 024721 177 -----------------DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLV-KTYPGVCHGWTVRYFVNDT 238 (263)
Q Consensus 177 -----------------~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~g~~H~~~~~~~~~~~ 238 (263)
..+.++++|+|+++|++|.++|++..+.+.+.++ +.++ ..++++||.-..-..
T Consensus 274 ~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~-----~a~~~~~~~~~GH~g~~~g~---- 344 (994)
T PRK07868 274 IAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP-----NAEVYESLIRAGHFGLVVGS---- 344 (994)
T ss_pred HHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEEeCCCCCEeeeech----
Confidence 0246778999999999999999999998887763 3444 566788997654333
Q ss_pred hhhhHHHHHHHHHHHHHHHHh
Q 024721 239 FAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 239 ~~~~~~~~~~~~~~~fl~~~l 259 (263)
...+++|..+.+||+++=
T Consensus 345 ---~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 345 ---RAAQQTWPTVADWVKWLE 362 (994)
T ss_pred ---hhhhhhChHHHHHHHHhc
Confidence 347899999999999753
No 81
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.57 E-value=1.8e-13 Score=111.40 Aligned_cols=185 Identities=17% Similarity=0.183 Sum_probs=118.2
Q ss_pred CCeeEEEeC--CC-CCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCcc
Q 024721 47 GGLKAYVTG--PP-HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDK 122 (263)
Q Consensus 47 ~~~~~~~~~--~~-~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (263)
++...|... ++ ..+.++|++||..++.. .|..-.+.|++ .+.|.++|.+ .|.+..+.-.. +.+.
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliHGyGAg~g-~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~----------d~~~ 141 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIHGYGAGLG-LFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSI----------DPTT 141 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEeccchhHH-HHHHhhhhhhh-cCceEEecccCCCCCCCCCCCC----------Cccc
Confidence 334444443 23 34578999998776653 44444566776 7999999996 34443333111 1111
Q ss_pred ccccHHHHH-HHHHhcCCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC------------------------
Q 024721 123 GYEDAKPVI-AALKEKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT------------------------ 175 (263)
Q Consensus 123 ~~~d~~~~~-~~l~~~~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~------------------------ 175 (263)
........+ +|-.+.+..+..++|||+||+++..+| +.| +|+-+++++|+..+
T Consensus 142 ~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~ 221 (365)
T KOG4409|consen 142 AEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVA 221 (365)
T ss_pred chHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhh
Confidence 112233333 233445788999999999999999998 444 99999999887521
Q ss_pred ------------------------------------------------------------------------hhhhhcc-
Q 024721 176 ------------------------------------------------------------------------EDEIKVV- 182 (263)
Q Consensus 176 ------------------------------------------------------------------------~~~~~~~- 182 (263)
.+.+..+
T Consensus 222 ~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~ 301 (365)
T KOG4409|consen 222 TNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELK 301 (365)
T ss_pred hcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhc
Confidence 2334444
Q ss_pred -cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 183 -KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 183 -~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
++|+++|+|++|.+=. ....++.+.+.. ..++++++|++||....+. .+.+.+.+..++++
T Consensus 302 ~~~pv~fiyG~~dWmD~-~~g~~~~~~~~~---~~~~~~~v~~aGHhvylDn----------p~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 302 KDVPVTFIYGDRDWMDK-NAGLEVTKSLMK---EYVEIIIVPGAGHHVYLDN----------PEFFNQIVLEECDK 363 (365)
T ss_pred cCCCEEEEecCcccccc-hhHHHHHHHhhc---ccceEEEecCCCceeecCC----------HHHHHHHHHHHHhc
Confidence 4999999999887643 344455554422 2689999999999775532 35666777777664
No 82
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.57 E-value=5.4e-13 Score=96.59 Aligned_cols=192 Identities=17% Similarity=0.214 Sum_probs=122.5
Q ss_pred EEEeCCCCCCeeEEEEecccC--CCchhhHHHHHHHHhCCCEEEeecCCCCC--CCCCCCCCcchhhhhhcCCCcccccc
Q 024721 51 AYVTGPPHSKKAVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPDFFHGD--AANPSNPKYDKDTWRKNHTTDKGYED 126 (263)
Q Consensus 51 ~~~~~~~~~~~~vv~~h~~~g--~~~~~~~~~~~~l~~~G~~vv~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (263)
.+++.|.++.+++|++-|+-| .+++.+...+..|+.+|+.|+.+++.+.. ......++.. .......
T Consensus 4 ~~~~~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~---------~~t~~~~ 74 (213)
T COG3571 4 GFLFDPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPG---------SGTLNPE 74 (213)
T ss_pred ccccCCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCc---------cccCCHH
Confidence 345667777776665555544 33468889999999999999999985211 1000000000 0111122
Q ss_pred HHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhhcC--CCccEEEEec-CCC---CC----hhhhhcccccEEEEecCCCC
Q 024721 127 AKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLH-PSN---VT----EDEIKVVKVPIAVLGAERDN 195 (263)
Q Consensus 127 ~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~-~~~---~~----~~~~~~~~~p~l~i~G~~D~ 195 (263)
....+..+++. ...++++-|+||||.++-.++.+ -.|.+++++. |.. .+ ..++..+..|+||.+|++|+
T Consensus 75 ~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGtrD~ 154 (213)
T COG3571 75 YIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGTRDE 154 (213)
T ss_pred HHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccchhhhccCCCCCeEEeeccccc
Confidence 33333344443 44589999999999999998843 3688888763 332 22 24677889999999999999
Q ss_pred CCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 196 GLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 196 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
+-..+.+..+ .+ + .+.++++++++.|.+-.....+.....+......+++-.|..+
T Consensus 155 fGtr~~Va~y--~l-s---~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 155 FGTRDEVAGY--AL-S---DPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred ccCHHHHHhh--hc-C---CceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 9887776332 22 2 2799999999999986554333333334455566677777664
No 83
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.56 E-value=6.7e-14 Score=106.12 Aligned_cols=161 Identities=19% Similarity=0.268 Sum_probs=114.6
Q ss_pred CCCeeEEEEecccCCC-chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 58 HSKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
++...+|++||..... ...+..+|..|.+.||.++.+|+ .|.|.+.+....+ . ....++|+..+++++..
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF-~GnGeS~gsf~~G------n--~~~eadDL~sV~q~~s~ 101 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDF-SGNGESEGSFYYG------N--YNTEADDLHSVIQYFSN 101 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEe-cCCCCcCCccccC------c--ccchHHHHHHHHHHhcc
Confidence 3445666777665533 23567788999999999999999 4554332221111 1 12334999999999986
Q ss_pred cCCCeEEEEEEeccHHHHHHhhc-CCCccEEEEecCCCCC----------------------------------------
Q 024721 137 KGVSAVGAAGFCWGGKVAVKLAS-NQDVQAAVLLHPSNVT---------------------------------------- 175 (263)
Q Consensus 137 ~~~~~i~~~G~S~Gg~~a~~~a~-~~~i~~~v~~~~~~~~---------------------------------------- 175 (263)
.+..--+++|||-||.+++.++. .+.++-++..+|....
T Consensus 102 ~nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSl 181 (269)
T KOG4667|consen 102 SNRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESL 181 (269)
T ss_pred CceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHH
Confidence 54334478999999999999884 3466667666655310
Q ss_pred --------hhhhhcc--cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccccc
Q 024721 176 --------EDEIKVV--KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVR 232 (263)
Q Consensus 176 --------~~~~~~~--~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~ 232 (263)
.....+| +||+|-+||..|.++|.+.++++.+.++ +..+..+||+.|.|...
T Consensus 182 mdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-----nH~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 182 MDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-----NHKLEIIEGADHNYTGH 243 (269)
T ss_pred HHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc-----CCceEEecCCCcCccch
Confidence 1122333 7999999999999999999999999884 37799999999999653
No 84
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.56 E-value=2.2e-13 Score=105.45 Aligned_cols=171 Identities=15% Similarity=0.273 Sum_probs=109.1
Q ss_pred eeEEEeCCCCC---CeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccc
Q 024721 49 LKAYVTGPPHS---KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYE 125 (263)
Q Consensus 49 ~~~~~~~~~~~---~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (263)
+.+|...|+.. +.+.|++..|++.....+..++++|+..||+|+.+|..+.-|.+.+. ...++++....
T Consensus 15 I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~--------I~eftms~g~~ 86 (294)
T PF02273_consen 15 IRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD--------INEFTMSIGKA 86 (294)
T ss_dssp EEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------------HHHHHH
T ss_pred EEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC--------hhhcchHHhHH
Confidence 77888887643 23677788888877789999999999999999999986322322221 23355667778
Q ss_pred cHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcCCCccEEEEecCCCC-------------------------------
Q 024721 126 DAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNV------------------------------- 174 (263)
Q Consensus 126 d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~------------------------------- 174 (263)
++..+++|+.+.+..+++++.-|.-|.+|+..|++..+.-++...|...
T Consensus 87 sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~ 166 (294)
T PF02273_consen 87 SLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADINLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGHN 166 (294)
T ss_dssp HHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTEE
T ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhccCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcccccccc
Confidence 9999999999989999999999999999999998777777777666541
Q ss_pred --------------------ChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 175 --------------------TEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 175 --------------------~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
..+..+++.+|++.+++.+|.++....+.++.+.+.. ...++..++|+.|...
T Consensus 167 l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s---~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 167 LGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINS---NKCKLYSLPGSSHDLG 239 (294)
T ss_dssp EEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT-----EEEEEETT-SS-TT
T ss_pred cchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCC---CceeEEEecCccchhh
Confidence 1356788899999999999999999988888887732 2688889999999874
No 85
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.56 E-value=3.2e-13 Score=119.04 Aligned_cols=166 Identities=16% Similarity=0.184 Sum_probs=116.6
Q ss_pred CCeeEEEeCCCC---CCeeEEEEecccCCCchhh-----HHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcC
Q 024721 47 GGLKAYVTGPPH---SKKAVLMISDIYGDEPPIY-----RSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNH 118 (263)
Q Consensus 47 ~~~~~~~~~~~~---~~~~vv~~h~~~g~~~~~~-----~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~ 118 (263)
+-++.+.+.|.. .++|||++|+...... .+ +.++++|+++||.|+++|++ |.+.+.. ..
T Consensus 172 ~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwr-gpg~s~~-----------~~ 238 (532)
T TIGR01838 172 ELFQLIQYEPTTETVHKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWR-NPDASQA-----------DK 238 (532)
T ss_pred CcEEEEEeCCCCCcCCCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECC-CCCcccc-----------cC
Confidence 447788777764 3478999998765321 11 47999999999999999995 3221111 01
Q ss_pred CCcccc-ccHHHHHHHHHhc-CCCeEEEEEEeccHHHHH-----HhhcC--CCccEEEEecCCCCC--------------
Q 024721 119 TTDKGY-EDAKPVIAALKEK-GVSAVGAAGFCWGGKVAV-----KLASN--QDVQAAVLLHPSNVT-------------- 175 (263)
Q Consensus 119 ~~~~~~-~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~-----~~a~~--~~i~~~v~~~~~~~~-------------- 175 (263)
+.+++. +++.++++.+.+. +.+++.++|||+||.++. ..+.. .++++++++......
T Consensus 239 ~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~ 318 (532)
T TIGR01838 239 TFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEI 318 (532)
T ss_pred ChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchh
Confidence 122333 3577778877754 677999999999999852 23333 378888876543200
Q ss_pred --------------------------------------------------------------------------------
Q 024721 176 -------------------------------------------------------------------------------- 175 (263)
Q Consensus 176 -------------------------------------------------------------------------------- 175 (263)
T Consensus 319 ~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~ 398 (532)
T TIGR01838 319 VAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALT 398 (532)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCc
Confidence
Q ss_pred ---------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 176 ---------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 176 ---------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
...+.++++|+|+++|++|.++|++.++.+.+.++ ..+..+++++||...
T Consensus 399 ~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-----~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 399 TGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-----GPKTFVLGESGHIAG 457 (532)
T ss_pred CCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-----CCEEEEECCCCCchH
Confidence 23577889999999999999999999888877763 345667888999875
No 86
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.55 E-value=9.5e-14 Score=112.58 Aligned_cols=174 Identities=20% Similarity=0.267 Sum_probs=128.4
Q ss_pred CCCeeEEEEecccCCCchhhHHHHHHHHhC-CCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHH
Q 024721 58 HSKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 135 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~-G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 135 (263)
.+.|+++++||.+|+. .+|+.++..|++. |-.|+++|.| ||.+.. ...+++....+|+..+++...
T Consensus 50 ~~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~-----------~~~h~~~~ma~dv~~Fi~~v~ 117 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDVRNHGSSPK-----------ITVHNYEAMAEDVKLFIDGVG 117 (315)
T ss_pred CCCCceEEecccccCC-CCHHHHHHHhcccccCceEEEecccCCCCcc-----------ccccCHHHHHHHHHHHHHHcc
Confidence 4568999999999997 5789999999987 8899999998 675322 223456778889999998886
Q ss_pred hc-CCCeEEEEEEeccH-HHHHHhh--cCCCccEEEEe--cCCCCC----------------------------------
Q 024721 136 EK-GVSAVGAAGFCWGG-KVAVKLA--SNQDVQAAVLL--HPSNVT---------------------------------- 175 (263)
Q Consensus 136 ~~-~~~~i~~~G~S~Gg-~~a~~~a--~~~~i~~~v~~--~~~~~~---------------------------------- 175 (263)
.. ...++.++|||||| .+++..+ +...+..++.. .|....
T Consensus 118 ~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~ 197 (315)
T KOG2382|consen 118 GSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLI 197 (315)
T ss_pred cccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHH
Confidence 43 35689999999999 4444433 22244444432 221100
Q ss_pred ----------------------------------------------hhhh--hcccccEEEEecCCCCCCChHHHHHHHH
Q 024721 176 ----------------------------------------------EDEI--KVVKVPIAVLGAERDNGLPPAQMKRFDE 207 (263)
Q Consensus 176 ----------------------------------------------~~~~--~~~~~p~l~i~G~~D~~~~~~~~~~~~~ 207 (263)
...+ .....|+|++.|.++.+++.+...++..
T Consensus 198 ~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~ 277 (315)
T KOG2382|consen 198 EVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEK 277 (315)
T ss_pred HHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHH
Confidence 0112 4457899999999999999998888887
Q ss_pred HHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 208 ILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 208 ~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
.++ .+++++++++||..+.+ ..+++.+.+.+|+..+
T Consensus 278 ~fp-----~~e~~~ld~aGHwVh~E----------~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 278 IFP-----NVEVHELDEAGHWVHLE----------KPEEFIESISEFLEEP 313 (315)
T ss_pred hcc-----chheeecccCCceeecC----------CHHHHHHHHHHHhccc
Confidence 774 58999999999988764 3578999999998764
No 87
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.54 E-value=1.2e-12 Score=104.19 Aligned_cols=184 Identities=20% Similarity=0.197 Sum_probs=121.4
Q ss_pred CCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 58 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
+..|.+|++|| +.....+|..+.++++++||+||.+|++. ... ......++++.++++|+.+.
T Consensus 15 g~yPVv~f~~G-~~~~~s~Ys~ll~hvAShGyIVV~~d~~~-~~~---------------~~~~~~~~~~~~vi~Wl~~~ 77 (259)
T PF12740_consen 15 GTYPVVLFLHG-FLLINSWYSQLLEHVASHGYIVVAPDLYS-IGG---------------PDDTDEVASAAEVIDWLAKG 77 (259)
T ss_pred CCcCEEEEeCC-cCCCHHHHHHHHHHHHhCceEEEEecccc-cCC---------------CCcchhHHHHHHHHHHHHhc
Confidence 34455555554 55555689999999999999999999742 110 01122346777788887652
Q ss_pred -----------CCCeEEEEEEeccHHHHHHhhcC-------CCccEEEEecCCCC-C-----------h-hhhhcccccE
Q 024721 138 -----------GVSAVGAAGFCWGGKVAVKLASN-------QDVQAAVLLHPSNV-T-----------E-DEIKVVKVPI 186 (263)
Q Consensus 138 -----------~~~~i~~~G~S~Gg~~a~~~a~~-------~~i~~~v~~~~~~~-~-----------~-~~~~~~~~p~ 186 (263)
|.++++++|||.||-++..++.. .++++++++.|..- . - ..-.+.+.|+
T Consensus 78 L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~s~~~~~P~ 157 (259)
T PF12740_consen 78 LESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTYTPQSFDFSMPA 157 (259)
T ss_pred chhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccCcccccCCCCCe
Confidence 45699999999999999987732 38999999998761 0 0 1112245899
Q ss_pred EEEecCCCC---------CCCh-HHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCC---C-----------Ch-hhh
Q 024721 187 AVLGAERDN---------GLPP-AQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFV---N-----------DT-FAV 241 (263)
Q Consensus 187 l~i~G~~D~---------~~~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~---~-----------~~-~~~ 241 (263)
|++..+.+. ..|. ...++++++++ . +.-..+..+.||.=..+... . +. -..
T Consensus 158 lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~-~---p~~~~v~~~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~ 233 (259)
T PF12740_consen 158 LVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECK-P---PSWHFVAKDYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRD 233 (259)
T ss_pred EEEecccCcccccccCCCCCCCCCCHHHHHHhcC-C---CEEEEEeCCCCchHhhcCCCcchhHHHHHHhhccCCCCCHH
Confidence 999877774 3343 34567888873 2 45555667789965433331 0 01 112
Q ss_pred hHHHHHHHHHHHHHHHHhhhC
Q 024721 242 NSAAEAHEDMINWFEKHVKCD 262 (263)
Q Consensus 242 ~~~~~~~~~~~~fl~~~l~~~ 262 (263)
+.++-....++.||+..|..+
T Consensus 234 ~~r~f~~g~~vAfl~~~l~g~ 254 (259)
T PF12740_consen 234 PMRRFVGGIMVAFLNAQLQGD 254 (259)
T ss_pred HHHHHHHHHHHHHHHHHhcCc
Confidence 456677779999999999876
No 88
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=1.7e-13 Score=125.95 Aligned_cols=186 Identities=16% Similarity=0.188 Sum_probs=128.9
Q ss_pred eeEEEEecccCCC---chhhHHHHHH-HHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 61 KAVLMISDIYGDE---PPIYRSVADK-VAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 61 ~~vv~~h~~~g~~---~~~~~~~~~~-l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
|.+|..|||.++. ..+...+... +.+.|++|+.+|.| |.+........... .+. -...++|...+++++.+
T Consensus 527 Pllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~R-Gs~~~G~~~~~~~~---~~l-G~~ev~D~~~~~~~~~~ 601 (755)
T KOG2100|consen 527 PLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGR-GSGGYGWDFRSALP---RNL-GDVEVKDQIEAVKKVLK 601 (755)
T ss_pred CEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCC-CcCCcchhHHHHhh---hhc-CCcchHHHHHHHHHHHh
Confidence 5677777877621 1223445555 44569999999995 44322221111110 011 12345677777777766
Q ss_pred c---CCCeEEEEEEeccHHHHHHhh-cCC--CccEEEEecCCCCC---------------------------hhhhhccc
Q 024721 137 K---GVSAVGAAGFCWGGKVAVKLA-SNQ--DVQAAVLLHPSNVT---------------------------EDEIKVVK 183 (263)
Q Consensus 137 ~---~~~~i~~~G~S~Gg~~a~~~a-~~~--~i~~~v~~~~~~~~---------------------------~~~~~~~~ 183 (263)
. |.+||+++|+|.||.+++.+. .++ -+++.++++|...- ...+..++
T Consensus 602 ~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~ 681 (755)
T KOG2100|consen 602 LPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIK 681 (755)
T ss_pred cccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhhcCCCccccchhhhccccchhhhhc
Confidence 5 778999999999999999976 443 56666888886420 12344455
Q ss_pred ccE-EEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhh
Q 024721 184 VPI-AVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 184 ~p~-l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
.|. |++||+.|+.++.+....++++| ++.|.+.++.+||+..|++.... .....+..+..||+.++..
T Consensus 682 ~~~~LliHGt~DdnVh~q~s~~~~~aL-~~~gv~~~~~vypde~H~is~~~---------~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 682 TPKLLLIHGTEDDNVHFQQSAILIKAL-QNAGVPFRLLVYPDENHGISYVE---------VISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred cCCEEEEEcCCcCCcCHHHHHHHHHHH-HHCCCceEEEEeCCCCccccccc---------chHHHHHHHHHHHHHHcCc
Confidence 555 99999999999999999999999 66788899999999999996542 2368889999999977654
No 89
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.53 E-value=1.8e-12 Score=105.21 Aligned_cols=116 Identities=20% Similarity=0.190 Sum_probs=81.4
Q ss_pred eeEEEeCCCCC--CeeEEEEecccCCC---chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccc
Q 024721 49 LKAYVTGPPHS--KKAVLMISDIYGDE---PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG 123 (263)
Q Consensus 49 ~~~~~~~~~~~--~~~vv~~h~~~g~~---~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 123 (263)
+-+++..|.+. .+.||++||..+.. ...+..+++.|+++||.|+++|++ |.|.+..... ..+...+
T Consensus 12 ~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~-G~G~S~g~~~--------~~~~~~~ 82 (266)
T TIGR03101 12 RFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLY-GCGDSAGDFA--------AARWDVW 82 (266)
T ss_pred EEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCC-CCCCCCCccc--------cCCHHHH
Confidence 44555555443 45677888754321 234566789999999999999995 4432221110 1223456
Q ss_pred cccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc-C-CCccEEEEecCCC
Q 024721 124 YEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS-N-QDVQAAVLLHPSN 173 (263)
Q Consensus 124 ~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~-~-~~i~~~v~~~~~~ 173 (263)
.+|+..+++++.+.+..+++++||||||.+++.+|. . .+++++|++.|..
T Consensus 83 ~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 83 KEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 689999999998877789999999999999999873 3 4888899988754
No 90
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.53 E-value=7.6e-14 Score=110.26 Aligned_cols=149 Identities=23% Similarity=0.278 Sum_probs=106.3
Q ss_pred EEEEecccC--CCchhhHHHHHHHHh-CCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc--
Q 024721 63 VLMISDIYG--DEPPIYRSVADKVAG-AGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-- 137 (263)
Q Consensus 63 vv~~h~~~g--~~~~~~~~~~~~l~~-~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-- 137 (263)
||++|||.- .+......++..+++ .|+.|+.+|||-. + ..++...++|+.++++|+.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~-p---------------~~~~p~~~~D~~~a~~~l~~~~~ 64 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA-P---------------EAPFPAALEDVKAAYRWLLKNAD 64 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T-T---------------TSSTTHHHHHHHHHHHHHHHTHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc-c---------------cccccccccccccceeeeccccc
Confidence 688997743 222344667777776 7999999999621 1 123456779999999999875
Q ss_pred ----CCCeEEEEEEeccHHHHHHhhc------CCCccEEEEecCCCCC--------------------------------
Q 024721 138 ----GVSAVGAAGFCWGGKVAVKLAS------NQDVQAAVLLHPSNVT-------------------------------- 175 (263)
Q Consensus 138 ----~~~~i~~~G~S~Gg~~a~~~a~------~~~i~~~v~~~~~~~~-------------------------------- 175 (263)
+.++|+++|+|.||.+++.++. .+.++++++++|....
T Consensus 65 ~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (211)
T PF07859_consen 65 KLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLY 144 (211)
T ss_dssp HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHH
T ss_pred cccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccc
Confidence 4679999999999999999872 1368999999987410
Q ss_pred -----h-----hhhh--cc--cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 176 -----E-----DEIK--VV--KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 176 -----~-----~~~~--~~--~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
. ..+. .. -.|+++++|++|.++ .....+.++|+ +.|.++++++++|..|.|.
T Consensus 145 ~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~-~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 145 LPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLK-KAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHH-HTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHH-HCCCCEEEEEECCCeEEee
Confidence 0 0010 11 248999999999875 46678999995 4778999999999999884
No 91
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.51 E-value=1.1e-12 Score=102.13 Aligned_cols=165 Identities=13% Similarity=0.205 Sum_probs=113.8
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK- 137 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 137 (263)
.+..++++++..|+. ..|+.+...|.. -+.++.+++ +|++.... +....|+..+++.+...
T Consensus 6 ~~~~L~cfP~AGGsa-~~fr~W~~~lp~-~iel~avql-PGR~~r~~---------------ep~~~di~~Lad~la~el 67 (244)
T COG3208 6 ARLRLFCFPHAGGSA-SLFRSWSRRLPA-DIELLAVQL-PGRGDRFG---------------EPLLTDIESLADELANEL 67 (244)
T ss_pred CCceEEEecCCCCCH-HHHHHHHhhCCc-hhheeeecC-CCcccccC---------------CcccccHHHHHHHHHHHh
Confidence 445689999887775 578899987765 489999999 55542211 23346666666666543
Q ss_pred ----CCCeEEEEEEeccHHHHHHhhcC----C-CccEEEEecCCCCC---------------------------------
Q 024721 138 ----GVSAVGAAGFCWGGKVAVKLASN----Q-DVQAAVLLHPSNVT--------------------------------- 175 (263)
Q Consensus 138 ----~~~~i~~~G~S~Gg~~a~~~a~~----~-~i~~~v~~~~~~~~--------------------------------- 175 (263)
...++++.||||||.++..+|+. . .++++.........
T Consensus 68 ~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~ 147 (244)
T COG3208 68 LPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDP 147 (244)
T ss_pred ccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCH
Confidence 23589999999999999999832 1 35555544322100
Q ss_pred ---------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCC
Q 024721 176 ---------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYF 234 (263)
Q Consensus 176 ---------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~ 234 (263)
-..-..+++|+..+.|++|..+..+....|.+..+. ..++++++| +|.|..
T Consensus 148 El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~----~f~l~~fdG-gHFfl~--- 219 (244)
T COG3208 148 ELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG----DFTLRVFDG-GHFFLN--- 219 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC----CceEEEecC-cceehh---
Confidence 001245789999999999999999888888887632 699999996 998854
Q ss_pred CCChhhhhHHHHHHHHHHHHHH
Q 024721 235 VNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
+..+++.+.+.+.+.
T Consensus 220 -------~~~~~v~~~i~~~l~ 234 (244)
T COG3208 220 -------QQREEVLARLEQHLA 234 (244)
T ss_pred -------hhHHHHHHHHHHHhh
Confidence 234555555555554
No 92
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.50 E-value=1.3e-12 Score=120.57 Aligned_cols=163 Identities=17% Similarity=0.200 Sum_probs=117.6
Q ss_pred HHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-----------------CCCe
Q 024721 79 SVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-----------------GVSA 141 (263)
Q Consensus 79 ~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-----------------~~~~ 141 (263)
.+.++|+++||+|+..|.| |.+.+.+.. .. ......+|..++|+|+..+ ...+
T Consensus 270 ~~~~~~~~rGYaVV~~D~R-Gtg~SeG~~--------~~-~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGk 339 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGI-GTRGSDGCP--------TT-GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGK 339 (767)
T ss_pred hHHHHHHhCCeEEEEEcCC-CCCCCCCcC--------cc-CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCe
Confidence 4668999999999999995 433222211 00 1134558999999999843 1469
Q ss_pred EEEEEEeccHHHHHHhhc--CCCccEEEEecCCCC---------------------------------------------
Q 024721 142 VGAAGFCWGGKVAVKLAS--NQDVQAAVLLHPSNV--------------------------------------------- 174 (263)
Q Consensus 142 i~~~G~S~Gg~~a~~~a~--~~~i~~~v~~~~~~~--------------------------------------------- 174 (263)
|+++|.|+||.+++.+|. .+.++++|...+...
T Consensus 340 VGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~ 419 (767)
T PRK05371 340 VAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEA 419 (767)
T ss_pred eEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHH
Confidence 999999999999998773 468888888543210
Q ss_pred ---------------------------ChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCc
Q 024721 175 ---------------------------TEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCH 227 (263)
Q Consensus 175 ---------------------------~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 227 (263)
....+.++++|+|+++|.+|..++.....+++++++. .+.+.++.+.++ +|
T Consensus 420 ~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~-~g~pkkL~l~~g-~H 497 (767)
T PRK05371 420 CEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPE-NGVPKKLFLHQG-GH 497 (767)
T ss_pred HHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHh-cCCCeEEEEeCC-Cc
Confidence 0012346789999999999999999888899999954 455788877775 88
Q ss_pred cccccCCCCChhhhhHHHHHHHHHHHHHHHHhhhC
Q 024721 228 GWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKCD 262 (263)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 262 (263)
..... ....+..+.+.+||+.+|++.
T Consensus 498 ~~~~~---------~~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 498 VYPNN---------WQSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred cCCCc---------hhHHHHHHHHHHHHHhccccC
Confidence 65332 124577888999999998864
No 93
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.50 E-value=7.9e-13 Score=113.27 Aligned_cols=66 Identities=12% Similarity=0.076 Sum_probs=53.1
Q ss_pred cccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCC-CCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 181 VVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPG-VCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 181 ~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
++++|+|+++|++|.++|++..+.+.+.++. .+.+.+++++++ +||.... +..+++.+.+.+||++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~-~~~~a~l~~I~s~~GH~~~l----------e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQK-QGKYAEVYEIESINGHMAGV----------FDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhh-cCCCeEEEEECCCCCcchhh----------cCHHHHHHHHHHHHcc
Confidence 5789999999999999999999989888842 233688999985 8997654 2356888889999875
No 94
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.49 E-value=5.1e-13 Score=105.26 Aligned_cols=112 Identities=19% Similarity=0.272 Sum_probs=83.6
Q ss_pred eeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhC-CCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCcccccc
Q 024721 49 LKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYED 126 (263)
Q Consensus 49 ~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~-G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (263)
+++|+..|+.+.-+|++++||.|.+.-.|..++.++.++ -.+|+++|.| ||.+...+. ...+.+...+|
T Consensus 62 ~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e---------~dlS~eT~~KD 132 (343)
T KOG2564|consen 62 FNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE---------DDLSLETMSKD 132 (343)
T ss_pred EEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh---------hhcCHHHHHHH
Confidence 889998886555567777777787777889999999886 6788999997 554322111 11344667789
Q ss_pred HHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC---CCccEEEEe
Q 024721 127 AKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN---QDVQAAVLL 169 (263)
Q Consensus 127 ~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~---~~i~~~v~~ 169 (263)
+.++++++-...+.+|+++||||||.++...|.. |.+.+++.+
T Consensus 133 ~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~vi 178 (343)
T KOG2564|consen 133 FGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVI 178 (343)
T ss_pred HHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEE
Confidence 9999988876667789999999999999987743 466666663
No 95
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.49 E-value=1.1e-13 Score=114.71 Aligned_cols=172 Identities=20% Similarity=0.229 Sum_probs=93.1
Q ss_pred eeEEEeCCCC---CCeeEEEEecccCCCc-----------------hhhHHHHHHHHhCCCEEEeecCC-CCCCCCCCCC
Q 024721 49 LKAYVTGPPH---SKKAVLMISDIYGDEP-----------------PIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNP 107 (263)
Q Consensus 49 ~~~~~~~~~~---~~~~vv~~h~~~g~~~-----------------~~~~~~~~~l~~~G~~vv~~d~~-~g~~~~~~~~ 107 (263)
+..|+..|++ +-|+||++|+-.+.+. +.-..++.+|+++||+|+++|.+ .|........
T Consensus 101 vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~ 180 (390)
T PF12715_consen 101 VPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGA 180 (390)
T ss_dssp EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCC
T ss_pred EEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccccccccccc
Confidence 7888888875 3467888885433210 01234689999999999999996 3432211111
Q ss_pred Cc----c---hhhhhhc--CCC-ccccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEecCC-
Q 024721 108 KY----D---KDTWRKN--HTT-DKGYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPS- 172 (263)
Q Consensus 108 ~~----~---~~~~~~~--~~~-~~~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~- 172 (263)
.. + ...+... .+. ....-|...++++|.++ +++||+++|+||||..++.+| .+++|++.|...-.
T Consensus 181 ~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdRIka~v~~~~l~ 260 (390)
T PF12715_consen 181 AQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDRIKATVANGYLC 260 (390)
T ss_dssp TTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT--EEEEES-B-
T ss_pred ccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchhhHhHhhhhhhh
Confidence 00 1 1111111 111 12223556688888776 678999999999999999977 67899888753210
Q ss_pred -C-------------------C----------Chhhhhc-----ccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCce
Q 024721 173 -N-------------------V----------TEDEIKV-----VKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDH 217 (263)
Q Consensus 173 -~-------------------~----------~~~~~~~-----~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~ 217 (263)
. . .--+++. -..|+|++.|++|..+|. ++..++.. . ...+.
T Consensus 261 ~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~Dklf~i--V~~AY~~~-~-~p~n~ 336 (390)
T PF12715_consen 261 TTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKDKLFPI--VRRAYAIM-G-APDNF 336 (390)
T ss_dssp -HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHHH--HHHHHHHT-T--GGGE
T ss_pred ccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcccccHH--HHHHHHhc-C-CCcce
Confidence 0 0 0001111 157999999999998754 66777775 2 44578
Q ss_pred eEEEcCC
Q 024721 218 LVKTYPG 224 (263)
Q Consensus 218 ~~~~~~g 224 (263)
++..||+
T Consensus 337 ~~~~~p~ 343 (390)
T PF12715_consen 337 QIHHYPK 343 (390)
T ss_dssp EE---GG
T ss_pred EEeeccc
Confidence 8888886
No 96
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.48 E-value=5.6e-12 Score=105.73 Aligned_cols=158 Identities=19% Similarity=0.294 Sum_probs=108.9
Q ss_pred CCeeEEEEecccCCC-chhhHHHHHHHHhCCCEEEeecCCCCCC-CCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 59 SKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDA-ANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
..|.||++||..|++ ..+.+.++..+.++||.|++++.| |.+ .....+ +- ......+|+..+++++++
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~R-G~~g~~LtTp-r~--------f~ag~t~Dl~~~v~~i~~ 193 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHR-GLGGSKLTTP-RL--------FTAGWTEDLREVVNHIKK 193 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCC-CCCCCccCCC-ce--------eecCCHHHHHHHHHHHHH
Confidence 347788899887754 457788899999999999999996 332 222211 11 113455899999999998
Q ss_pred c-CCCeEEEEEEeccHHHHHHhh-cC----CCccEEEEecCCCC------------------------------------
Q 024721 137 K-GVSAVGAAGFCWGGKVAVKLA-SN----QDVQAAVLLHPSNV------------------------------------ 174 (263)
Q Consensus 137 ~-~~~~i~~~G~S~Gg~~a~~~a-~~----~~i~~~v~~~~~~~------------------------------------ 174 (263)
+ ...++..+|+||||.+...+. .. +-+.|+....|+..
T Consensus 194 ~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~ 273 (409)
T KOG1838|consen 194 RYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLF 273 (409)
T ss_pred hCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhh
Confidence 7 555899999999999999955 22 24455555556541
Q ss_pred ----------------------------------------ChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCC
Q 024721 175 ----------------------------------------TEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPK 214 (263)
Q Consensus 175 ----------------------------------------~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~ 214 (263)
+...+.+|.+|+|+|++.+|+++|++.. -+. ...+++
T Consensus 274 ~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~i-p~~-~~~~np- 350 (409)
T KOG1838|consen 274 EDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAI-PID-DIKSNP- 350 (409)
T ss_pred hccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccC-CHH-HHhcCC-
Confidence 0245778899999999999999997643 222 332333
Q ss_pred CceeEEEcCCCCcccc
Q 024721 215 FDHLVKTYPGVCHGWT 230 (263)
Q Consensus 215 ~~~~~~~~~g~~H~~~ 230 (263)
++-+.+-..+||-=.
T Consensus 351 -~v~l~~T~~GGHlgf 365 (409)
T KOG1838|consen 351 -NVLLVITSHGGHLGF 365 (409)
T ss_pred -cEEEEEeCCCceeee
Confidence 566666666688443
No 97
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.47 E-value=2e-12 Score=99.31 Aligned_cols=188 Identities=21% Similarity=0.236 Sum_probs=127.7
Q ss_pred eeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCC-CCCCCCcchhhhhhcCCC-cccccc
Q 024721 49 LKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAA-NPSNPKYDKDTWRKNHTT-DKGYED 126 (263)
Q Consensus 49 ~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~-~~~~~~~~~~~~~~~~~~-~~~~~d 126 (263)
+.++.+...++.+..|++.+.+|...-+|+.++...+.+||.|+++||| |.+. ++...... ...+ +=...|
T Consensus 18 l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyR-G~g~S~p~~~~~~------~~~~~DwA~~D 90 (281)
T COG4757 18 LPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYR-GIGQSRPASLSGS------QWRYLDWARLD 90 (281)
T ss_pred CccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecc-cccCCCccccccC------ccchhhhhhcc
Confidence 4555555555556678888888876678999999999999999999996 3322 11111100 0111 223369
Q ss_pred HHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhhcCCCccEEEEec------CCC--------------------------
Q 024721 127 AKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLH------PSN-------------------------- 173 (263)
Q Consensus 127 ~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~------~~~-------------------------- 173 (263)
+.++++++++. ...+...+|||+||.+.-.+.++++..+...+. +..
T Consensus 91 ~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~ 170 (281)
T COG4757 91 FPAALAALKKALPGHPLYFVGHSFGGQALGLLGQHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYM 170 (281)
T ss_pred hHHHHHHHHhhCCCCceEEeeccccceeecccccCcccceeeEeccccccccchhhhhcccceeeccccccchhhccccC
Confidence 99999999874 455899999999999988888766544433321 110
Q ss_pred ------------------------------CC------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCce
Q 024721 174 ------------------------------VT------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDH 217 (263)
Q Consensus 174 ------------------------------~~------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~ 217 (263)
.+ .+..+.+++|++++...+|+.+|+...+.+.+.-+.+ +.
T Consensus 171 p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nA---pl 247 (281)
T COG4757 171 PKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNA---PL 247 (281)
T ss_pred cHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcC---cc
Confidence 00 2345778999999999999999999988888776432 56
Q ss_pred eEEEcCCC----CccccccCCCCChhhhhHHHHHHHHHHHHH
Q 024721 218 LVKTYPGV----CHGWTVRYFVNDTFAVNSAAEAHEDMINWF 255 (263)
Q Consensus 218 ~~~~~~g~----~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 255 (263)
+...++.+ ||.=..+ +..+..|+++++||
T Consensus 248 ~~~~~~~~~~~lGH~gyfR---------~~~Ealwk~~L~w~ 280 (281)
T COG4757 248 EMRDLPRAEGPLGHMGYFR---------EPFEALWKEMLGWF 280 (281)
T ss_pred cceecCcccCcccchhhhc---------cchHHHHHHHHHhh
Confidence 66666554 6643332 11368899999997
No 98
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.47 E-value=1.4e-12 Score=104.22 Aligned_cols=198 Identities=16% Similarity=0.200 Sum_probs=127.3
Q ss_pred CeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCC-CCCCCCCCc-----chhhhhhcCCC-------------
Q 024721 60 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGD-AANPSNPKY-----DKDTWRKNHTT------------- 120 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~-~~~~~~~~~-----~~~~~~~~~~~------------- 120 (263)
+-|||++.||.|.....|..++-.||++||.|+++++|..+ .+++...+. ....|..-...
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 33566666666666678999999999999999999997332 222111111 11111111000
Q ss_pred -ccccccHHHHHHHHHhc------------------------CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEecCCCC
Q 024721 121 -DKGYEDAKPVIAALKEK------------------------GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNV 174 (263)
Q Consensus 121 -~~~~~d~~~~~~~l~~~------------------------~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~ 174 (263)
-....++..++..+++. +-++++++|||+||..++... .+.++++.|++.++..
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAWMF 276 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeeeec
Confidence 11122344444444432 224789999999999998854 5669999999999987
Q ss_pred Ch--hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCC-------------Chh
Q 024721 175 TE--DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVN-------------DTF 239 (263)
Q Consensus 175 ~~--~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~-------------~~~ 239 (263)
+. ...++++.|+|+|.-++=+ -.+....+++...++. ...+.++.|+=|.-..+.... +..
T Consensus 277 Pl~~~~~~~arqP~~finv~~fQ--~~en~~vmKki~~~n~--g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~d 352 (399)
T KOG3847|consen 277 PLDQLQYSQARQPTLFINVEDFQ--WNENLLVMKKIESQNE--GNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETD 352 (399)
T ss_pred ccchhhhhhccCCeEEEEccccc--chhHHHHHHhhhCCCc--cceEEEEccceecccccCccccHHHHHHHhccCCCCC
Confidence 65 4678899999999964322 2356666777764333 346788888888654332111 111
Q ss_pred hhhHHHHHHHHHHHHHHHHhhh
Q 024721 240 AVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 240 ~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
..++.+...+..++||++++..
T Consensus 353 py~~~~~~~r~slaFLq~h~d~ 374 (399)
T KOG3847|consen 353 PYEAMQIAIRASLAFLQKHLDL 374 (399)
T ss_pred hHHHHHHHHHHHHHHHHhhhhh
Confidence 1378899999999999998764
No 99
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.45 E-value=9.2e-13 Score=106.78 Aligned_cols=197 Identities=17% Similarity=0.236 Sum_probs=83.3
Q ss_pred ceEEeeCC-eeEEEeCCCC--CCeeEEEEecccC--CCchhhHHHHHHHHhCCCEEEeecCCC-CCCCCCCCCCcchhhh
Q 024721 41 GTVTELGG-LKAYVTGPPH--SKKAVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPDFFH-GDAANPSNPKYDKDTW 114 (263)
Q Consensus 41 ~~~~~~~~-~~~~~~~~~~--~~~~vv~~h~~~g--~~~~~~~~~~~~l~~~G~~vv~~d~~~-g~~~~~~~~~~~~~~~ 114 (263)
|....+.. +..|-+.+.. ++..||++.|... ...++...+++.|.+.||.++-+.+.. -.++.
T Consensus 11 G~lh~Y~~~~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G----------- 79 (303)
T PF08538_consen 11 GILHHYTPKLVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWG----------- 79 (303)
T ss_dssp EEEEEECCTTEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS------------
T ss_pred eEEEEECCCCeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcC-----------
Confidence 44444443 4444444332 2334555554432 224688899999987899999998841 11211
Q ss_pred hhcCCCccccccHHHHHHHHHhc-----CCCeEEEEEEeccHHHHHHhh---cC----CCccEEEEecCCCCC-------
Q 024721 115 RKNHTTDKGYEDAKPVIAALKEK-----GVSAVGAAGFCWGGKVAVKLA---SN----QDVQAAVLLHPSNVT------- 175 (263)
Q Consensus 115 ~~~~~~~~~~~d~~~~~~~l~~~-----~~~~i~~~G~S~Gg~~a~~~a---~~----~~i~~~v~~~~~~~~------- 175 (263)
..+.++-++|+..+++|++.. +.++|+++|||.|..-++.+. .+ +.|.++|+-.|....
T Consensus 80 --~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~ 157 (303)
T PF08538_consen 80 --TSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFL 157 (303)
T ss_dssp --S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSH
T ss_pred --cchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcc
Confidence 123355678999999999987 467999999999999999976 22 579999996654310
Q ss_pred -------------------------------------------------------------------hhhhhcccccEEE
Q 024721 176 -------------------------------------------------------------------EDEIKVVKVPIAV 188 (263)
Q Consensus 176 -------------------------------------------------------------------~~~~~~~~~p~l~ 188 (263)
...+.++.+|+|+
T Consensus 158 ~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLv 237 (303)
T PF08538_consen 158 GEREAYEELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLV 237 (303)
T ss_dssp HH---HHHHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEE
T ss_pred cchHHHHHHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEE
Confidence 1246677899999
Q ss_pred EecCCCCCCChHH-HHHHHHHHHcCCC---CceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 189 LGAERDNGLPPAQ-MKRFDEILYAKPK---FDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 189 i~G~~D~~~~~~~-~~~~~~~l~~~~~---~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
+.+++|+.+|... .+.+.++++...+ ....--++||+.|.+..+... .+.+++.+.+..||+
T Consensus 238 l~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~------~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 238 LYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQA------EAREWLVERVVKFLK 303 (303)
T ss_dssp EEE--TT-----------------------------------------------------------------
T ss_pred EecCCCceecccccccccccccccccccccccccccccccccccccccccc------cccccccccccccCC
Confidence 9999999998643 3345555533222 123355899999988654322 234567777777764
No 100
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.41 E-value=7.5e-12 Score=95.06 Aligned_cols=135 Identities=17% Similarity=0.176 Sum_probs=91.4
Q ss_pred EEEEecccCCC-chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc---C
Q 024721 63 VLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK---G 138 (263)
Q Consensus 63 vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~ 138 (263)
|+++||..++. ..++..+.+.+.+. +.|-.+++. . -++...++.+.+. -
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~--~------------------------P~~~~W~~~l~~~i~~~ 53 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD--N------------------------PDLDEWVQALDQAIDAI 53 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T--S--------------------------HHHHHHHHHHCCHC-
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC--C------------------------CCHHHHHHHHHHHHhhc
Confidence 57888877653 34667778888777 777777761 1 2444455555443 2
Q ss_pred CCeEEEEEEeccHHHHHHhh-cC--CCccEEEEecCCCCC-h------------hhhhcccccEEEEecCCCCCCChHHH
Q 024721 139 VSAVGAAGFCWGGKVAVKLA-SN--QDVQAAVLLHPSNVT-E------------DEIKVVKVPIAVLGAERDNGLPPAQM 202 (263)
Q Consensus 139 ~~~i~~~G~S~Gg~~a~~~a-~~--~~i~~~v~~~~~~~~-~------------~~~~~~~~p~l~i~G~~D~~~~~~~~ 202 (263)
.+++.++|||+|+..++.++ .+ .+++++++++|.... . .....+..|.+++.+++|+++|.+..
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~viaS~nDp~vp~~~a 133 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVIASDNDPYVPFERA 133 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEEEETTBSSS-HHHH
T ss_pred CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEEEcCCCCccCHHHH
Confidence 34699999999999999977 33 499999999987642 1 11223457889999999999999999
Q ss_pred HHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 203 KRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 203 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
+.+.+.+ +.++..++++||...
T Consensus 134 ~~~A~~l------~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 134 QRLAQRL------GAELIILGGGGHFNA 155 (171)
T ss_dssp HHHHHHH------T-EEEEETS-TTSSG
T ss_pred HHHHHHc------CCCeEECCCCCCccc
Confidence 9999999 588999999999443
No 101
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.41 E-value=1e-11 Score=101.96 Aligned_cols=132 Identities=20% Similarity=0.228 Sum_probs=91.4
Q ss_pred HHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcC--CCeEEEEEEeccHHHHHHhhc--
Q 024721 84 VAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKG--VSAVGAAGFCWGGKVAVKLAS-- 159 (263)
Q Consensus 84 l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~--~~~i~~~G~S~Gg~~a~~~a~-- 159 (263)
|+++||+||.+|.| |.+.+...... ......+|..++|+|+..+. ..+|+++|.|.+|...+.+|.
T Consensus 53 ~~~~GY~vV~~D~R-G~g~S~G~~~~---------~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~ 122 (272)
T PF02129_consen 53 FAERGYAVVVQDVR-GTGGSEGEFDP---------MSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARR 122 (272)
T ss_dssp HHHTT-EEEEEE-T-TSTTS-S-B-T---------TSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT
T ss_pred HHhCCCEEEEECCc-ccccCCCcccc---------CChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcC
Confidence 99999999999995 44322221100 03456689999999999883 349999999999999999874
Q ss_pred CCCccEEEEecCCCCC----------------------------------------------------------------
Q 024721 160 NQDVQAAVLLHPSNVT---------------------------------------------------------------- 175 (263)
Q Consensus 160 ~~~i~~~v~~~~~~~~---------------------------------------------------------------- 175 (263)
++.+++++...+....
T Consensus 123 ~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (272)
T PF02129_consen 123 PPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYW 202 (272)
T ss_dssp -TTEEEEEEESE-SBTCCTSSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHH
T ss_pred CCCceEEEecccCCcccccchhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHH
Confidence 4699999986544200
Q ss_pred ------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCC-CceeEEEcCCCCcc
Q 024721 176 ------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPK-FDHLVKTYPGVCHG 228 (263)
Q Consensus 176 ------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~g~~H~ 228 (263)
...+.++++|+|++.|-.|..+. ....+.++.+ .+.+ .+.++++-|. .|.
T Consensus 203 ~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l-~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 203 DEWLDHPPYDPFWQERSPSERLDKIDVPVLIVGGWYDTLFL-RGALRAYEAL-RAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp HHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEEETTCSSTS-HHHHHHHHHH-CTTSTC-EEEEEESE-STT
T ss_pred HHHHhCCCcCHHHHhCChHHHHhhCCCCEEEecccCCcccc-hHHHHHHHHh-hcCCCCCCEEEEeCC-CCC
Confidence 12357889999999999997777 5667778888 4444 4568888874 774
No 102
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.41 E-value=1.5e-11 Score=96.42 Aligned_cols=194 Identities=18% Similarity=0.178 Sum_probs=123.2
Q ss_pred eeEEEeCCCCCC-eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccH
Q 024721 49 LKAYVTGPPHSK-KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDA 127 (263)
Q Consensus 49 ~~~~~~~~~~~~-~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (263)
.+..+..|...+ -+||+++|++.....+|.++...++++||.|++|+.....+ + +-.+.+++.
T Consensus 33 kpLlI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~--p--------------~~~~Ei~~a 96 (307)
T PF07224_consen 33 KPLLIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP--P--------------DGQDEIKSA 96 (307)
T ss_pred CCeEEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC--C--------------CchHHHHHH
Confidence 455566665433 24555555555444689999999999999999999842221 1 113445788
Q ss_pred HHHHHHHHhc-----------CCCeEEEEEEeccHHHHHHhhcCC----CccEEEEecCCCCCh-------------hhh
Q 024721 128 KPVIAALKEK-----------GVSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPSNVTE-------------DEI 179 (263)
Q Consensus 128 ~~~~~~l~~~-----------~~~~i~~~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~~~~-------------~~~ 179 (263)
..+++|+.+. +.++++++|||.||..+..+|... ++.++|.+.|..-.. ..-
T Consensus 97 a~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty~p~S 176 (307)
T PF07224_consen 97 ASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTPPPILTYVPQS 176 (307)
T ss_pred HHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCCCCeeecCCcc
Confidence 8899998753 456999999999999999988432 788999888764210 011
Q ss_pred hcccccEEEEecCCC----CC---CChH--HHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCC------------h
Q 024721 180 KVVKVPIAVLGAERD----NG---LPPA--QMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVND------------T 238 (263)
Q Consensus 180 ~~~~~p~l~i~G~~D----~~---~~~~--~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~------------~ 238 (263)
-+++.|+++|...-- .. +.++ ..++++++.+. +....+-.+-||.=..+.+... .
T Consensus 177 F~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~----p~~hfV~~dYGHmDmLDD~~~g~~G~~~~clCkng 252 (307)
T PF07224_consen 177 FDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKP----PCAHFVAKDYGHMDMLDDDTPGIIGKLSYCLCKNG 252 (307)
T ss_pred cccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcc----cceeeeecccccccccccCccccccceeeEeecCC
Confidence 245689999875544 22 2222 34678888742 4445555556775543333210 0
Q ss_pred h--hhhHHHHHHHHHHHHHHHHhhhC
Q 024721 239 F--AVNSAAEAHEDMINWFEKHVKCD 262 (263)
Q Consensus 239 ~--~~~~~~~~~~~~~~fl~~~l~~~ 262 (263)
+ ....+.-+-..+++||+.+|..|
T Consensus 253 ~~pr~pMRr~vgGivVAFL~a~l~~~ 278 (307)
T PF07224_consen 253 KSPRDPMRRFVGGIVVAFLKAYLEGD 278 (307)
T ss_pred CCcchHHHHhhhhhHHHHHHHHHcCC
Confidence 0 01234555568899999998776
No 103
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=7.4e-12 Score=108.70 Aligned_cols=192 Identities=17% Similarity=0.184 Sum_probs=127.5
Q ss_pred eeEEEeCCC-----CCCeeEEEEecccCCCc--hhhH----HHHHHHHhCCCEEEeecCCCCC--CCCCCCCCcchhhhh
Q 024721 49 LKAYVTGPP-----HSKKAVLMISDIYGDEP--PIYR----SVADKVAGAGFLVVAPDFFHGD--AANPSNPKYDKDTWR 115 (263)
Q Consensus 49 ~~~~~~~~~-----~~~~~vv~~h~~~g~~~--~~~~----~~~~~l~~~G~~vv~~d~~~g~--~~~~~~~~~~~~~~~ 115 (263)
+-+-++.|. .+.|.++.+.||.+... +.|. -....|++.||.|+.+|-|+.. |.. +..+.
T Consensus 626 lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk-------FE~~i 698 (867)
T KOG2281|consen 626 LYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK-------FESHI 698 (867)
T ss_pred EEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh-------hHHHH
Confidence 445566664 34577899999887321 1121 1356789999999999996321 211 12222
Q ss_pred hcCCCccccccHHHHHHHHHhc----CCCeEEEEEEeccHHHHHH-hhcCC-CccEEEEecCCCC---------------
Q 024721 116 KNHTTDKGYEDAKPVIAALKEK----GVSAVGAAGFCWGGKVAVK-LASNQ-DVQAAVLLHPSNV--------------- 174 (263)
Q Consensus 116 ~~~~~~~~~~d~~~~~~~l~~~----~~~~i~~~G~S~Gg~~a~~-~a~~~-~i~~~v~~~~~~~--------------- 174 (263)
...=-...++|=...+++|.++ +.+||++-|||.||.+++. +++.| -++.+|+-.|...
T Consensus 699 k~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~ 778 (867)
T KOG2281|consen 699 KKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMGY 778 (867)
T ss_pred hhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcCC
Confidence 2211133445656666666665 6889999999999999998 55666 4555555444320
Q ss_pred C---------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChh
Q 024721 175 T---------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTF 239 (263)
Q Consensus 175 ~---------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~ 239 (263)
+ .+.++.-+..+|++||--|+.+.......+.++| -++|++.++++||+..|+.-...
T Consensus 779 P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~l-vkagKpyeL~IfP~ERHsiR~~e------ 851 (867)
T KOG2281|consen 779 PDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSAL-VKAGKPYELQIFPNERHSIRNPE------ 851 (867)
T ss_pred CccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHH-HhCCCceEEEEccccccccCCCc------
Confidence 0 1234444556999999999999999989999999 56788999999999999885432
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 024721 240 AVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 240 ~~~~~~~~~~~~~~fl~~ 257 (263)
.....-..++.||++
T Consensus 852 ---s~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 852 ---SGIYYEARLLHFLQE 866 (867)
T ss_pred ---cchhHHHHHHHHHhh
Confidence 223444567777764
No 104
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.39 E-value=2.6e-11 Score=109.11 Aligned_cols=113 Identities=15% Similarity=0.099 Sum_probs=76.2
Q ss_pred eeEEEeCCCC--CCeeEEEEecccCCCc---hhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccc
Q 024721 49 LKAYVTGPPH--SKKAVLMISDIYGDEP---PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG 123 (263)
Q Consensus 49 ~~~~~~~~~~--~~~~vv~~h~~~g~~~---~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 123 (263)
+.++++.|.+ +.|.||++|+...... ......++.|+++||.|+++|+| |.+.+.... .... ...
T Consensus 9 L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~R-G~g~S~g~~--------~~~~-~~~ 78 (550)
T TIGR00976 9 LAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTR-GRGASEGEF--------DLLG-SDE 78 (550)
T ss_pred EEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEecc-ccccCCCce--------EecC-ccc
Confidence 5566677753 3456666765443321 12234567899999999999996 333222110 0111 456
Q ss_pred cccHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhhcC--CCccEEEEecC
Q 024721 124 YEDAKPVIAALKEK--GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHP 171 (263)
Q Consensus 124 ~~d~~~~~~~l~~~--~~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~ 171 (263)
.+|+..+++++.++ ...+|+++|+|+||.+++.+|.. +.+++++...+
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~ 130 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEG 130 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCc
Confidence 78999999999876 34599999999999999998843 58888887443
No 105
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.38 E-value=4.7e-12 Score=104.53 Aligned_cols=164 Identities=23% Similarity=0.271 Sum_probs=112.1
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCC-CCCCCcchhhhhhcCCCccccccHHHHHHHHHhc--
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAAN-PSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-- 137 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-- 137 (263)
-|||++.|+.|+....+..+++.+++.||.|..+|+. |+... .......... +.....-+...|+..++++|.+.
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hp-gs~~~~~~~~~~~~~~-~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHP-GSNAGGAPAAYAGPGS-YAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCC-CcccccCChhhcCCcc-cchhhhhcccccHHHHHHHHHHhhc
Confidence 4678888888877778999999999999999999994 32111 0000000000 00011123447999999988765
Q ss_pred --------CCCeEEEEEEeccHHHHHHhhc----------------------------------------------CCCc
Q 024721 138 --------GVSAVGAAGFCWGGKVAVKLAS----------------------------------------------NQDV 163 (263)
Q Consensus 138 --------~~~~i~~~G~S~Gg~~a~~~a~----------------------------------------------~~~i 163 (263)
+..+|+++|||+||..++.++- +++|
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~rDpri 228 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYDLRDPRI 228 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccccchhhhccccccc
Confidence 3569999999999999998762 3478
Q ss_pred cEEEEecCCCCC---hhhhhcccccEEEEecCCCCCCChHHH-HHHHHHHHcCCCCceeEEEcCCCCccc
Q 024721 164 QAAVLLHPSNVT---EDEIKVVKVPIAVLGAERDNGLPPAQM-KRFDEILYAKPKFDHLVKTYPGVCHGW 229 (263)
Q Consensus 164 ~~~v~~~~~~~~---~~~~~~~~~p~l~i~G~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~ 229 (263)
+++++..|.... ..-+.+++.|++++.|..|.+.|...- ......| .+....+...|++.|.-
T Consensus 229 ravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l---~g~~k~~~~vp~a~h~s 295 (365)
T COG4188 229 RAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYL---PGALKYLRLVPGATHFS 295 (365)
T ss_pred eeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccC---CcchhheeecCCCcccc
Confidence 888888776432 345778899999999999998776442 2334444 33345678888899954
No 106
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.38 E-value=2e-11 Score=107.02 Aligned_cols=166 Identities=14% Similarity=0.084 Sum_probs=119.4
Q ss_pred CCeeEEEeCCCCC---CeeEEEEecccCCCc----hhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCC
Q 024721 47 GGLKAYVTGPPHS---KKAVLMISDIYGDEP----PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 119 (263)
Q Consensus 47 ~~~~~~~~~~~~~---~~~vv~~h~~~g~~~----~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~ 119 (263)
+-++.+.+.|... +.|||+++....... .--+.++++|.++||.|+++|++. .+.. ....+
T Consensus 199 ~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~n-P~~~-----------~r~~~ 266 (560)
T TIGR01839 199 EVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRN-PDKA-----------HREWG 266 (560)
T ss_pred CceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCC-CChh-----------hcCCC
Confidence 4477887877532 467888887654210 011578999999999999999941 1100 11234
Q ss_pred CccccccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHH----hh-cCC--CccEEEEecCCCCC----------------
Q 024721 120 TDKGYEDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVK----LA-SNQ--DVQAAVLLHPSNVT---------------- 175 (263)
Q Consensus 120 ~~~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~----~a-~~~--~i~~~v~~~~~~~~---------------- 175 (263)
++++++.+..+++.+++. +.++|.++|+|+||.++.. ++ ..+ +|+.++++......
T Consensus 267 ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~ 346 (560)
T TIGR01839 267 LSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLE 346 (560)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHH
Confidence 566777888999998877 6779999999999999985 33 333 68888764432100
Q ss_pred --------------------------------------------------------------------------------
Q 024721 176 -------------------------------------------------------------------------------- 175 (263)
Q Consensus 176 -------------------------------------------------------------------------------- 175 (263)
T Consensus 347 ~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG 426 (560)
T TIGR01839 347 AAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPD 426 (560)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCC
Confidence
Q ss_pred -------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccc
Q 024721 176 -------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGW 229 (263)
Q Consensus 176 -------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 229 (263)
.-++++|++|+|++.|++|.++|++.+....+.+. + +++++..++ ||--
T Consensus 427 ~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~g---s-~~~fvl~~g-GHIg 482 (560)
T TIGR01839 427 ALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLG---G-KRRFVLSNS-GHIQ 482 (560)
T ss_pred CEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcC---C-CeEEEecCC-Cccc
Confidence 12578899999999999999999999998888772 2 688999985 8954
No 107
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.35 E-value=7.1e-11 Score=90.50 Aligned_cols=182 Identities=19% Similarity=0.226 Sum_probs=116.9
Q ss_pred CCeeEEEEecccCCCchhh----HHHHHHHHhCCCEEEeecCCCCC-----CCC--------CCCCCcchhhhhhcCC-C
Q 024721 59 SKKAVLMISDIYGDEPPIY----RSVADKVAGAGFLVVAPDFFHGD-----AAN--------PSNPKYDKDTWRKNHT-T 120 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~----~~~~~~l~~~G~~vv~~d~~~g~-----~~~--------~~~~~~~~~~~~~~~~-~ 120 (263)
.++.|||+||..-+. ..+ ..+.+.+.+. +..+.+|-++-- +.. +.+...+..+|+.... .
T Consensus 4 ~k~rvLcLHGfrQsg-~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSG-KVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhhcc-HHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 346699999876543 222 3345555555 677777764311 100 0111111345655544 2
Q ss_pred cccccc----HHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc----------CCCccEEEEecCCCCCh------hhhh
Q 024721 121 DKGYED----AKPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS----------NQDVQAAVLLHPSNVTE------DEIK 180 (263)
Q Consensus 121 ~~~~~d----~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~----------~~~i~~~v~~~~~~~~~------~~~~ 180 (263)
...... +..+.+++.++++ -=+++|+|+|+.++..++. .|.++-+|.++|..... ....
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~~ 160 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYKR 160 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhcc
Confidence 222233 5555556666543 3479999999999999763 25789999999876541 1335
Q ss_pred cccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 181 VVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 181 ~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
.+++|.|.+.|+.|+++|...++.+++... +..+...| +||.+.. .....+.+.+||++.+.
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~-----~a~vl~Hp-ggH~VP~------------~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFK-----DATVLEHP-GGHIVPN------------KAKYKEKIADFIQSFLQ 222 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcC-----CCeEEecC-CCccCCC------------chHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999984 23566666 5997743 23566778888887654
Q ss_pred h
Q 024721 261 C 261 (263)
Q Consensus 261 ~ 261 (263)
.
T Consensus 223 ~ 223 (230)
T KOG2551|consen 223 E 223 (230)
T ss_pred h
Confidence 3
No 108
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.34 E-value=4.6e-12 Score=100.79 Aligned_cols=129 Identities=23% Similarity=0.336 Sum_probs=89.9
Q ss_pred CEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhh-cCC-CccE
Q 024721 89 FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQA 165 (263)
Q Consensus 89 ~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~ 165 (263)
|.|+++|.| |.+.+....... .. .-...|+.+.++.+.+. +.+++.++||||||.+++.+| ..| ++++
T Consensus 1 f~vi~~d~r-G~g~S~~~~~~~----~~----~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~ 71 (230)
T PF00561_consen 1 FDVILFDLR-GFGYSSPHWDPD----FP----DYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKK 71 (230)
T ss_dssp EEEEEEECT-TSTTSSSCCGSG----SC----THCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEE
T ss_pred CEEEEEeCC-CCCCCCCCccCC----cc----cccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcC
Confidence 689999995 444332100000 11 11224455555444443 666799999999999999977 444 8999
Q ss_pred EEEecCC---------------CCC-------------------------------------------------------
Q 024721 166 AVLLHPS---------------NVT------------------------------------------------------- 175 (263)
Q Consensus 166 ~v~~~~~---------------~~~------------------------------------------------------- 175 (263)
+++..+. ...
T Consensus 72 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00561_consen 72 LVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAF 151 (230)
T ss_dssp EEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHH
T ss_pred cEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHH
Confidence 9999885 100
Q ss_pred ----------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccc
Q 024721 176 ----------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTV 231 (263)
Q Consensus 176 ----------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 231 (263)
...+.++++|+|+++|++|.++|++....+.+.++ +.++++++++||....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 152 DNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-----NSQLVLIEGSGHFAFL 218 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-----TEEEEEETTCCSTHHH
T ss_pred hhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-----CCEEEECCCCChHHHh
Confidence 12356789999999999999999999888766663 5889999999997744
No 109
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.33 E-value=6.8e-11 Score=89.35 Aligned_cols=158 Identities=20% Similarity=0.268 Sum_probs=109.4
Q ss_pred EEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-CCCe
Q 024721 63 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-GVSA 141 (263)
Q Consensus 63 vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~ 141 (263)
+|++.|-.|-. ..-..+++.|+++|+.|+-+|.+ ..+++..++++...|+..+++...++ +.++
T Consensus 5 ~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl--------------~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~ 69 (192)
T PF06057_consen 5 AVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSL--------------RYFWSERTPEQTAADLARIIRHYRARWGRKR 69 (192)
T ss_pred EEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechH--------------HHHhhhCCHHHHHHHHHHHHHHHHHHhCCce
Confidence 44554433433 45578999999999999999973 23344556788889999999988777 7789
Q ss_pred EEEEEEeccHHHHHHhhcC------CCccEEEEecCCCCC---------------------hhhhhccc-ccEEEEecCC
Q 024721 142 VGAAGFCWGGKVAVKLASN------QDVQAAVLLHPSNVT---------------------EDEIKVVK-VPIAVLGAER 193 (263)
Q Consensus 142 i~~~G~S~Gg~~a~~~a~~------~~i~~~v~~~~~~~~---------------------~~~~~~~~-~p~l~i~G~~ 193 (263)
+.++|+|+|+-+..-+.+. .+++.++++.+.... ..++.+++ .|+++++|++
T Consensus 70 vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~ 149 (192)
T PF06057_consen 70 VVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGED 149 (192)
T ss_pred EEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCC
Confidence 9999999999887776532 388899888776421 23445554 4999999988
Q ss_pred CCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 194 DNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 194 D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
|+-.. +. .+ ...+.+.+..|| ||-|..+ -+.+.+.|++-|++
T Consensus 150 E~d~~---cp----~l---~~~~~~~i~lpG-gHHfd~d-----------y~~La~~Il~~l~~ 191 (192)
T PF06057_consen 150 EDDSL---CP----SL---RQPGVEVIALPG-GHHFDGD-----------YDALAKRILDALKA 191 (192)
T ss_pred CCCCc---Cc----cc---cCCCcEEEEcCC-CcCCCCC-----------HHHHHHHHHHHHhc
Confidence 76421 11 12 122688999997 6767543 24556666665553
No 110
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.32 E-value=1e-10 Score=99.62 Aligned_cols=189 Identities=13% Similarity=0.079 Sum_probs=127.0
Q ss_pred eeEEEeCCCCC-----CeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccc
Q 024721 49 LKAYVTGPPHS-----KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKG 123 (263)
Q Consensus 49 ~~~~~~~~~~~-----~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 123 (263)
.+.+.+.|... .|+||++....+......+.+.+.|.+ |+.|+..|+. .+..- +.. ...++++++
T Consensus 86 ~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~--~p~~v---p~~----~~~f~ldDY 155 (406)
T TIGR01849 86 CRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWV--NARMV---PLS----AGKFDLEDY 155 (406)
T ss_pred eEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCC--CCCCC---chh----cCCCCHHHH
Confidence 56666665422 268888887776443455788999998 9999999983 22100 000 012344555
Q ss_pred cccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhh-----cC-C-CccEEEEecCCCC----------------------
Q 024721 124 YEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLA-----SN-Q-DVQAAVLLHPSNV---------------------- 174 (263)
Q Consensus 124 ~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a-----~~-~-~i~~~v~~~~~~~---------------------- 174 (263)
++.+..+++.+ +.+ +.++|+|+||..++.++ .. + +++.++++.+...
T Consensus 156 i~~l~~~i~~~---G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~ 231 (406)
T TIGR01849 156 IDYLIEFIRFL---GPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQH 231 (406)
T ss_pred HHHHHHHHHHh---CCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHH
Confidence 54444444444 655 99999999999977543 21 2 5888877443210
Q ss_pred ------------------C-------------------------------------------------------------
Q 024721 175 ------------------T------------------------------------------------------------- 175 (263)
Q Consensus 175 ------------------~------------------------------------------------------------- 175 (263)
+
T Consensus 232 ~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~ 311 (406)
T TIGR01849 232 NVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTID 311 (406)
T ss_pred HhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHH
Confidence 0
Q ss_pred ------------------hhhhhccc-ccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCC
Q 024721 176 ------------------EDEIKVVK-VPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVN 236 (263)
Q Consensus 176 ------------------~~~~~~~~-~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~ 236 (263)
.-++++|+ +|+|.+.|++|.++|++..+.+.+.+..-+..+++.++.+++||-=...+.
T Consensus 312 ~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~-- 389 (406)
T TIGR01849 312 VVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGS-- 389 (406)
T ss_pred HHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeCh--
Confidence 12577888 999999999999999999999888863223335667777778995544333
Q ss_pred ChhhhhHHHHHHHHHHHHHHHH
Q 024721 237 DTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 237 ~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
..+++.|..+.+||.++
T Consensus 390 -----r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 390 -----RFREEIYPLVREFIRRN 406 (406)
T ss_pred -----hhhhhhchHHHHHHHhC
Confidence 45789999999999864
No 111
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.31 E-value=1e-10 Score=89.79 Aligned_cols=149 Identities=18% Similarity=0.140 Sum_probs=93.5
Q ss_pred EEEEecccCCC-chhhHHHHHHHHhCC--CEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCC
Q 024721 63 VLMISDIYGDE-PPIYRSVADKVAGAG--FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGV 139 (263)
Q Consensus 63 vv~~h~~~g~~-~~~~~~~~~~l~~~G--~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 139 (263)
||.+||..++. ......+.+++++.+ ..+..++.. .. +... +..+.+.+.+...
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-~~-------------------p~~a---~~~l~~~i~~~~~ 58 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-PF-------------------PEEA---IAQLEQLIEELKP 58 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-cC-------------------HHHH---HHHHHHHHHhCCC
Confidence 56777765533 223345667777765 456666662 11 1111 2222333334345
Q ss_pred CeEEEEEEeccHHHHHHhhcCCCccEEEEecCCCCC-----------------------h---hhh-------hcccccE
Q 024721 140 SAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT-----------------------E---DEI-------KVVKVPI 186 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~-----------------------~---~~~-------~~~~~p~ 186 (263)
+.+.++|.|+||..|.++|....+++ |+++|...+ . ..+ ..-..++
T Consensus 59 ~~~~liGSSlGG~~A~~La~~~~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~ 137 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAERYGLPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERY 137 (187)
T ss_pred CCeEEEEEChHHHHHHHHHHHhCCCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccE
Confidence 56999999999999999997777777 788887632 0 011 1224689
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHH
Q 024721 187 AVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWF 255 (263)
Q Consensus 187 l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 255 (263)
+++.++.|++++.... .+..+ .....+.+|++|.|.. -++....+++|+
T Consensus 138 lvll~~~DEvLd~~~a---~~~~~-----~~~~~i~~ggdH~f~~------------f~~~l~~i~~f~ 186 (187)
T PF05728_consen 138 LVLLQTGDEVLDYREA---VAKYR-----GCAQIIEEGGDHSFQD------------FEEYLPQIIAFL 186 (187)
T ss_pred EEEEecCCcccCHHHH---HHHhc-----CceEEEEeCCCCCCcc------------HHHHHHHHHHhh
Confidence 9999999999987443 33332 2334455677999953 467778888886
No 112
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.29 E-value=1.1e-11 Score=93.50 Aligned_cols=160 Identities=16% Similarity=0.120 Sum_probs=116.3
Q ss_pred eEEEeCCCCCCeeEEEEecccC--CCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccH
Q 024721 50 KAYVTGPPHSKKAVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDA 127 (263)
Q Consensus 50 ~~~~~~~~~~~~~vv~~h~~~g--~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (263)
.+-+..|....+..|++|||+- ++...-...+..+..+||+|+.++|- -.+ ..+..++.+.++
T Consensus 57 ~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~-l~~--------------q~htL~qt~~~~ 121 (270)
T KOG4627|consen 57 LVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN-LCP--------------QVHTLEQTMTQF 121 (270)
T ss_pred EEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC-cCc--------------ccccHHHHHHHH
Confidence 3444566677789999999864 22223345666777889999999982 111 113345666788
Q ss_pred HHHHHHHHhc--CCCeEEEEEEeccHHHHHHhh---cCCCccEEEEecCCCC-------------------------Chh
Q 024721 128 KPVIAALKEK--GVSAVGAAGFCWGGKVAVKLA---SNQDVQAAVLLHPSNV-------------------------TED 177 (263)
Q Consensus 128 ~~~~~~l~~~--~~~~i~~~G~S~Gg~~a~~~a---~~~~i~~~v~~~~~~~-------------------------~~~ 177 (263)
...++++.+. +.+.+.+-|||.|+.++..+. ++|+|.+++++.|... ...
T Consensus 122 ~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~ 201 (270)
T KOG4627|consen 122 THGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLW 201 (270)
T ss_pred HHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHH
Confidence 8888888765 456799999999999999855 4579999998877631 123
Q ss_pred hhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccc
Q 024721 178 EIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGW 229 (263)
Q Consensus 178 ~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 229 (263)
.+..++.|+|++.+++|..--.++.+.+.+.++ ...+..+++.+|.-
T Consensus 202 ~~~~v~~~ilVv~~~~espklieQnrdf~~q~~-----~a~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 202 EYTDVTVWILVVAAEHESPKLIEQNRDFADQLR-----KASFTLFKNYDHYD 248 (270)
T ss_pred HhcCceeeeeEeeecccCcHHHHhhhhHHHHhh-----hcceeecCCcchhh
Confidence 567788999999999997655677777877774 47789999988844
No 113
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.28 E-value=2.3e-10 Score=90.01 Aligned_cols=143 Identities=15% Similarity=0.158 Sum_probs=86.1
Q ss_pred eeEEEEecccCCCchhhHHH--HHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcC--CCccccccHHHHHHHHH
Q 024721 61 KAVLMISDIYGDEPPIYRSV--ADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNH--TTDKGYEDAKPVIAALK 135 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~--~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~l~ 135 (263)
|.||++||..+.. ..+... ...++++ ||.|+.|+... .... . .-..|.... .-......+..+++++.
T Consensus 17 PLVv~LHG~~~~a-~~~~~~s~~~~lAd~~GfivvyP~~~~-~~~~---~--~cw~w~~~~~~~g~~d~~~i~~lv~~v~ 89 (220)
T PF10503_consen 17 PLVVVLHGCGQSA-EDFAAGSGWNALADREGFIVVYPEQSR-RANP---Q--GCWNWFSDDQQRGGGDVAFIAALVDYVA 89 (220)
T ss_pred CEEEEeCCCCCCH-HHHHhhcCHHHHhhcCCeEEEcccccc-cCCC---C--CcccccccccccCccchhhHHHHHHhHh
Confidence 4555666554432 332221 2346654 99999998621 1000 0 001121111 11122345667777776
Q ss_pred hc---CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC-------------------hh-------hh-hccc
Q 024721 136 EK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT-------------------ED-------EI-KVVK 183 (263)
Q Consensus 136 ~~---~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~-------------------~~-------~~-~~~~ 183 (263)
.+ |++||++.|+|.||.++..++ ..| .+.++..++|.... .. .. ..-.
T Consensus 90 ~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~~a~~~~g~~~~ 169 (220)
T PF10503_consen 90 ARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAAAWGARSDAGAYPG 169 (220)
T ss_pred hhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChHHHHHhhhhccCCCC
Confidence 55 788999999999999999988 344 77777776655311 00 00 0113
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHHH
Q 024721 184 VPIAVLGAERDNGLPPAQMKRFDEILY 210 (263)
Q Consensus 184 ~p~l~i~G~~D~~~~~~~~~~~~~~l~ 210 (263)
.|++++||+.|..+.+...+++.+.+.
T Consensus 170 ~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCEEEEecCCCCccCcchHHHHHHHHH
Confidence 599999999999999988888777764
No 114
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.26 E-value=3.2e-10 Score=96.42 Aligned_cols=192 Identities=18% Similarity=0.205 Sum_probs=127.5
Q ss_pred CCCeeEEEEecccCCCchhh-----HHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcch--hhhhhcCCC-ccccccHHH
Q 024721 58 HSKKAVLMISDIYGDEPPIY-----RSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDK--DTWRKNHTT-DKGYEDAKP 129 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~~~~~-----~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~~ 129 (263)
+++|+|++.||....+..+. ..++-.|+++||.|..-+.| |..++..-..... ..-+..++. +-...|+.+
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~R-Gn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA 149 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNR-GNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPA 149 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCc-CcccchhhcccCCcCCcceeecchhhhhhcCHHH
Confidence 55688888888877653322 44677899999999999995 4433222111110 000112233 335679999
Q ss_pred HHHHHHhc-CCCeEEEEEEeccHHHHHHhhc-CC----CccEEEEecCCCC-----------------------------
Q 024721 130 VIAALKEK-GVSAVGAAGFCWGGKVAVKLAS-NQ----DVQAAVLLHPSNV----------------------------- 174 (263)
Q Consensus 130 ~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~-~~----~i~~~v~~~~~~~----------------------------- 174 (263)
+++++.+. +.+++..+|||+|+.....+.+ +| +|+..++.+|...
T Consensus 150 ~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~ 229 (403)
T KOG2624|consen 150 MIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRK 229 (403)
T ss_pred HHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCc
Confidence 99999876 6789999999999999998663 32 6888877666530
Q ss_pred --------------------------------------------------------------------------------
Q 024721 175 -------------------------------------------------------------------------------- 174 (263)
Q Consensus 175 -------------------------------------------------------------------------------- 174 (263)
T Consensus 230 ~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~ 309 (403)
T KOG2624|consen 230 EFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDY 309 (403)
T ss_pred cccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCC
Confidence
Q ss_pred --------------ChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhh
Q 024721 175 --------------TEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFA 240 (263)
Q Consensus 175 --------------~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~ 240 (263)
+...+..+.+|+.+.+|++|.++.+++++.+...+.. ... ....-+++-.| +..-...
T Consensus 310 G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~-~~~-~~~~~~~~ynH-lDFi~g~----- 381 (403)
T KOG2624|consen 310 GSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPN-SVI-KYIVPIPEYNH-LDFIWGL----- 381 (403)
T ss_pred CccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhccc-ccc-cccccCCCccc-eeeeecc-----
Confidence 0124567789999999999999999999988887742 211 22222565566 2111111
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q 024721 241 VNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 241 ~~~~~~~~~~~~~fl~~~l 259 (263)
++.+++++.+++.+++..
T Consensus 382 -da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 382 -DAKEEVYDPVIERLRLFE 399 (403)
T ss_pred -CcHHHHHHHHHHHHHhhh
Confidence 457889999999888654
No 115
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.25 E-value=4.1e-11 Score=94.66 Aligned_cols=165 Identities=21% Similarity=0.267 Sum_probs=82.7
Q ss_pred CCeeEEEEecccCCCchhhHH----HHHHHHhCCCEEEeecCCCCC----CCCCC--------CCCcchhhhhhcCCCcc
Q 024721 59 SKKAVLMISDIYGDEPPIYRS----VADKVAGAGFLVVAPDFFHGD----AANPS--------NPKYDKDTWRKNHTTDK 122 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~----~~~~l~~~G~~vv~~d~~~g~----~~~~~--------~~~~~~~~~~~~~~~~~ 122 (263)
.++.||++||...+. ..++. +.+.|.+.++..+.+|-+.-. +.... ........|+.......
T Consensus 3 ~k~riLcLHG~~~na-~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA-EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--H-HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCH-HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 346788888875543 44443 445555437999999875211 11100 00111122443333223
Q ss_pred ccccHHHHHHHHH----hcCCCeEEEEEEeccHHHHHHhhc----------CCCccEEEEecCCCCChh------hhhcc
Q 024721 123 GYEDAKPVIAALK----EKGVSAVGAAGFCWGGKVAVKLAS----------NQDVQAAVLLHPSNVTED------EIKVV 182 (263)
Q Consensus 123 ~~~d~~~~~~~l~----~~~~~~i~~~G~S~Gg~~a~~~a~----------~~~i~~~v~~~~~~~~~~------~~~~~ 182 (263)
...++...++++. +.++ -.+++|+|+||.++..++. .+.++.+|++++...... ...++
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~i 160 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPKI 160 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT-
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhccccC
Confidence 3444555555444 4343 5789999999999998761 236899999987764321 23457
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
++|+|.++|++|++++++..+.+.+.... ..++...++ ||.+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~----~~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDP----DARVIEHDG-GHHVP 203 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHH----HEEEEEESS-SSS--
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccC----CcEEEEECC-CCcCc
Confidence 99999999999999999999999999852 177888885 99774
No 116
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.20 E-value=4.2e-10 Score=92.97 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=54.6
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCCC-CceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhh
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKPK-FDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKC 261 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~ 261 (263)
+.|+++.+|..|+++|....+++.+.+- +.| .+++++.+++.+|.-.. .......++||++++.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c-~~G~a~V~~~~~~~~~H~~~~-------------~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWC-AAGGADVEYVRYPGGGHLGAA-------------FASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHH-HcCCCCEEEEecCCCChhhhh-------------hcCcHHHHHHHHHHHCC
Confidence 6799999999999999999999999984 456 68999999999996532 23446788999998876
Q ss_pred C
Q 024721 262 D 262 (263)
Q Consensus 262 ~ 262 (263)
+
T Consensus 285 ~ 285 (290)
T PF03583_consen 285 K 285 (290)
T ss_pred C
Confidence 5
No 117
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.20 E-value=8.1e-10 Score=88.12 Aligned_cols=148 Identities=16% Similarity=0.236 Sum_probs=100.6
Q ss_pred EEEeC-CCCCCe-eEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHH
Q 024721 51 AYVTG-PPHSKK-AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAK 128 (263)
Q Consensus 51 ~~~~~-~~~~~~-~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 128 (263)
+|... |.++.. .||-+||-+|+. ..++.+...|.+.|++++..+| +|.+.....+... ++..+...-+.
T Consensus 24 ~y~D~~~~gs~~gTVv~~hGsPGSH-~DFkYi~~~l~~~~iR~I~iN~-PGf~~t~~~~~~~-------~~n~er~~~~~ 94 (297)
T PF06342_consen 24 VYEDSLPSGSPLGTVVAFHGSPGSH-NDFKYIRPPLDEAGIRFIGINY-PGFGFTPGYPDQQ-------YTNEERQNFVN 94 (297)
T ss_pred EEEecCCCCCCceeEEEecCCCCCc-cchhhhhhHHHHcCeEEEEeCC-CCCCCCCCCcccc-------cChHHHHHHHH
Confidence 44444 334333 466688888876 5789999999999999999999 5655443322221 22223334445
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhhcCCCccEEEEecCCCCC---------------------------------
Q 024721 129 PVIAALKEKGVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT--------------------------------- 175 (263)
Q Consensus 129 ~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~--------------------------------- 175 (263)
++++.|.- .+++..+|||.|+-.++.+|...+..++++++|....
T Consensus 95 ~ll~~l~i--~~~~i~~gHSrGcenal~la~~~~~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~ 172 (297)
T PF06342_consen 95 ALLDELGI--KGKLIFLGHSRGCENALQLAVTHPLHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFY 172 (297)
T ss_pred HHHHHcCC--CCceEEEEeccchHHHHHHHhcCccceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 55554422 2589999999999999999865567799998876521
Q ss_pred --------------------------------hhhhhcccccEEEEecCCCCCCChHHHHHHHHHH
Q 024721 176 --------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEIL 209 (263)
Q Consensus 176 --------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l 209 (263)
.+.+.+-++|+|+++|.+|.++-.+.+.++...+
T Consensus 173 y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 173 YRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred HHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 2234455689999999999998777666665554
No 118
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.15 E-value=4.2e-09 Score=91.00 Aligned_cols=182 Identities=9% Similarity=0.055 Sum_probs=108.1
Q ss_pred eeEEEeCCCC----CCeeEEEEecccCCCchhhHHHHHHHHhCC----CEEEeecCCCCCCCCCCCCCcchhhhhhcCCC
Q 024721 49 LKAYVTGPPH----SKKAVLMISDIYGDEPPIYRSVADKVAGAG----FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 120 (263)
Q Consensus 49 ~~~~~~~~~~----~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G----~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (263)
.+++++.|++ +.|.|+++||..-..........+.|.+.| ..+|.+|...+.. ......+.
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~-R~~el~~~---------- 262 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTH-RSQELPCN---------- 262 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCccc-ccccCCch----------
Confidence 6677777753 235566666543222122345566666666 4577887631111 10100000
Q ss_pred ccccc-cHHHHHHHHHhc-----CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC-C------h----hhhhc
Q 024721 121 DKGYE-DAKPVIAALKEK-----GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV-T------E----DEIKV 181 (263)
Q Consensus 121 ~~~~~-d~~~~~~~l~~~-----~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~-~------~----~~~~~ 181 (263)
....+ -...++.++.++ +.++.+++|+||||..++.++ .+| .+.++++++|++. . . ..+..
T Consensus 263 ~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~ 342 (411)
T PRK10439 263 ADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRGGQQEGVLLEQLKA 342 (411)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCccCCchhHHHHHHHh
Confidence 01111 123334444433 567899999999999999988 444 8899999998752 1 0 11111
Q ss_pred -----ccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 182 -----VKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 182 -----~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
....+++-+|+.|..+ .+..+++.+.| .+.|.++++.+++| ||.+ ..........+.||-
T Consensus 343 ~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L-~~~G~~~~~~~~~G-GHd~------------~~Wr~~L~~~L~~l~ 407 (411)
T PRK10439 343 GEVSARGLRIVLEAGRREPMI-MRANQALYAQL-HPAGHSVFWRQVDG-GHDA------------LCWRGGLIQGLIDLW 407 (411)
T ss_pred cccCCCCceEEEeCCCCCchH-HHHHHHHHHHH-HHCCCcEEEEECCC-CcCH------------HHHHHHHHHHHHHHh
Confidence 1346888899988654 35678899999 45677899999997 8976 334455555555553
No 119
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.14 E-value=3.6e-10 Score=90.09 Aligned_cols=85 Identities=21% Similarity=0.151 Sum_probs=67.0
Q ss_pred CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCChhhhhcc-cccEEEEecCCCCCCChHHHHHHHHHHHcCCC
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVTEDEIKVV-KVPIAVLGAERDNGLPPAQMKRFDEILYAKPK 214 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~~~~~~~~-~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~ 214 (263)
|.+||.++|.|+||..++.++ +.| .+.+.+.++|........+.+ +.|+.++|+.+|+++|.+.+.-.+++++. -+
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~-~~ 345 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKA-LD 345 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhhhhhhccCceEEEEecCCCccccCcceeehHHHHh-hc
Confidence 778999999999999999988 334 889999999988655555555 67999999999999999888777777743 33
Q ss_pred CceeEEEcC
Q 024721 215 FDHLVKTYP 223 (263)
Q Consensus 215 ~~~~~~~~~ 223 (263)
.++++..|.
T Consensus 346 ~kv~Ytaf~ 354 (387)
T COG4099 346 RKVNYTAFL 354 (387)
T ss_pred cccchhhhh
Confidence 345555554
No 120
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.05 E-value=6.9e-09 Score=79.12 Aligned_cols=105 Identities=20% Similarity=0.275 Sum_probs=79.6
Q ss_pred CCCeEEEEEEeccHHHHHHhhc--CCCccEEEEecCCCCCh-hhh----h-cccccEEEEecCCCCCCChHHHHHHHHHH
Q 024721 138 GVSAVGAAGFCWGGKVAVKLAS--NQDVQAAVLLHPSNVTE-DEI----K-VVKVPIAVLGAERDNGLPPAQMKRFDEIL 209 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a~--~~~i~~~v~~~~~~~~~-~~~----~-~~~~p~l~i~G~~D~~~~~~~~~~~~~~l 209 (263)
+.+||++-|+|+||.+++..+. ...+.+++..++..... ..+ . .-..|++..||+.|+++|..-.+...+.|
T Consensus 91 ~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d~~vp~~~g~~s~~~l 170 (206)
T KOG2112|consen 91 PSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTADPLVPFRFGEKSAQFL 170 (206)
T ss_pred CccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCccccCcchhheecccCCceeehHHHHHHHHHH
Confidence 4679999999999999999883 23667777777665421 111 1 11679999999999999998888888888
Q ss_pred HcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 210 YAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 210 ~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
+. .+..++++.|+|.+|... .+-..++..|+++
T Consensus 171 ~~-~~~~~~f~~y~g~~h~~~--------------~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 171 KS-LGVRVTFKPYPGLGHSTS--------------PQELDDLKSWIKT 203 (206)
T ss_pred HH-cCCceeeeecCCcccccc--------------HHHHHHHHHHHHH
Confidence 44 555699999999999664 3566778888876
No 121
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.04 E-value=7.2e-09 Score=85.63 Aligned_cols=144 Identities=17% Similarity=0.174 Sum_probs=93.3
Q ss_pred HHHHHHhCCCEEEeecCC-CCCCCCCCCCCcchhhhhhcC-C-CccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHH
Q 024721 80 VADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNH-T-TDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVK 156 (263)
Q Consensus 80 ~~~~l~~~G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~-~-~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~ 156 (263)
++..|.+.|+..+.+..+ +|.-....+....... .... - -...+.+...+++|+++++..++++.|.||||.+|..
T Consensus 113 ~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~-VsDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~l 191 (348)
T PF09752_consen 113 MARPLLKEGIASLILENPYYGQRKPKDQRRSSLRN-VSDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAAL 191 (348)
T ss_pred hhhHHHHcCcceEEEecccccccChhHhhcccccc-hhHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHh
Confidence 388899999999988775 5542211111111100 0000 0 0345578899999999998889999999999999999
Q ss_pred hh-cCCCccEEEEe-cCCCCC-----------------------------------------------------------
Q 024721 157 LA-SNQDVQAAVLL-HPSNVT----------------------------------------------------------- 175 (263)
Q Consensus 157 ~a-~~~~i~~~v~~-~~~~~~----------------------------------------------------------- 175 (263)
+| ..|+.-+++.+ ++...+
T Consensus 192 aa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~ 271 (348)
T PF09752_consen 192 AASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMR 271 (348)
T ss_pred hhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHH
Confidence 77 44544444432 222100
Q ss_pred -----hhhhhcc-----cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 176 -----EDEIKVV-----KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 176 -----~~~~~~~-----~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
.-++.+. ...+.++.+++|.++|...+..+.+.++ ..++.+++| ||.-.
T Consensus 272 ~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP-----GsEvR~l~g-GHVsA 330 (348)
T PF09752_consen 272 GVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWP-----GSEVRYLPG-GHVSA 330 (348)
T ss_pred HHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCC-----CCeEEEecC-CcEEE
Confidence 0011222 2358899999999999998888877774 578888997 99553
No 122
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.02 E-value=1.7e-08 Score=82.39 Aligned_cols=165 Identities=18% Similarity=0.228 Sum_probs=108.1
Q ss_pred CeeEEEEecccCCCchhhHHHHHHHHhC---CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 60 KKAVLMISDIYGDEPPIYRSVADKVAGA---GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~~~~~~~~l~~~---G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
+..++++.|-.|.- .+|..+.+.|.++ .|.|+.+.+ -|....+...... .-...++.++.++--...++.+..
T Consensus 2 ~~li~~IPGNPGlv-~fY~~Fl~~L~~~l~~~~~i~~ish-~Gh~~~~~~~~~~--~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV-EFYEEFLSALYEKLNPQFEILGISH-AGHSTSPSNSKFS--PNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCChH-HHHHHHHHHHHHhCCCCCeeEEecC-CCCcCCccccccc--CCCCccCHHHHHHHHHHHHHHHhh
Confidence 35678888888874 6999999999866 699999998 4443322221100 001122333333434444443333
Q ss_pred c---CCCeEEEEEEeccHHHHHHhhc-CC----CccEEEEecCCCCC---------------------------------
Q 024721 137 K---GVSAVGAAGFCWGGKVAVKLAS-NQ----DVQAAVLLHPSNVT--------------------------------- 175 (263)
Q Consensus 137 ~---~~~~i~~~G~S~Gg~~a~~~a~-~~----~i~~~v~~~~~~~~--------------------------------- 175 (263)
. ...+++++|||.|+++++.+.+ .+ +++.+++..|-...
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~~~~~~~l~~~ 157 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWLASFLSFLLSL 157 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 2 3468999999999999999883 23 78888887765410
Q ss_pred ---------------------------------------------------h-hh-hhcc---cccEEEEecCCCCCCCh
Q 024721 176 ---------------------------------------------------E-DE-IKVV---KVPIAVLGAERDNGLPP 199 (263)
Q Consensus 176 ---------------------------------------------------~-~~-~~~~---~~p~l~i~G~~D~~~~~ 199 (263)
. +. +... ...+.+.+|++|.++|.
T Consensus 158 lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~fg~~D~Wvp~ 237 (266)
T PF10230_consen 158 LPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFYFGQNDHWVPN 237 (266)
T ss_pred CCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEEEeCCCCCCCH
Confidence 1 11 1222 46899999999999999
Q ss_pred HHHHHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 200 AQMKRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 200 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
+..+++.+..+. ...+..+.. +|..|+|.
T Consensus 238 ~~~~~l~~~~~~-~~~~~~v~~-~~i~HaFc 266 (266)
T PF10230_consen 238 ETRDELIERYPG-HEPDVVVDE-EGIPHAFC 266 (266)
T ss_pred HHHHHHHHHcCC-CCCeEEEec-CCCCCCCC
Confidence 999999999842 223566666 88999873
No 123
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.99 E-value=1e-08 Score=82.24 Aligned_cols=119 Identities=20% Similarity=0.206 Sum_probs=68.3
Q ss_pred eeEEEeCCCC---CCeeEEEEecccCCCchhhHHHH--HHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC--
Q 024721 49 LKAYVTGPPH---SKKAVLMISDIYGDEPPIYRSVA--DKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT-- 120 (263)
Q Consensus 49 ~~~~~~~~~~---~~~~vv~~h~~~g~~~~~~~~~~--~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~-- 120 (263)
...+++.|.. +.|.||++||..++. .-+.... +.++++ ||.|+.||-+.+. +... ....|....+.
T Consensus 47 r~y~l~vP~g~~~~apLvv~LHG~~~sg-ag~~~~sg~d~lAd~~gFlV~yPdg~~~~-wn~~----~~~~~~~p~~~~~ 120 (312)
T COG3509 47 RSYRLYVPPGLPSGAPLVVVLHGSGGSG-AGQLHGTGWDALADREGFLVAYPDGYDRA-WNAN----GCGNWFGPADRRR 120 (312)
T ss_pred cceEEEcCCCCCCCCCEEEEEecCCCCh-HHhhcccchhhhhcccCcEEECcCccccc-cCCC----cccccCCcccccC
Confidence 5556666653 235677777766543 2233333 555554 9999999764322 1111 11112111111
Q ss_pred -ccccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCC
Q 024721 121 -DKGYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSN 173 (263)
Q Consensus 121 -~~~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~ 173 (263)
.+.+..+.++++.+..+ ++.||++.|.|.||.++..++.. + .+.++..+.+..
T Consensus 121 g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 121 GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 22334566666666554 67799999999999999998843 4 555555555444
No 124
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.99 E-value=1.8e-09 Score=88.58 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=72.6
Q ss_pred CCCeeEEEEecccCCC-chhhHHHHHHHHh-CCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHH
Q 024721 58 HSKKAVLMISDIYGDE-PPIYRSVADKVAG-AGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 135 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~-~~~~~~~~~~l~~-~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 135 (263)
..+|.+|++||+.+.. ..++..+++.+.+ .+|.|+++|++.+....+ . ..........+++..+++.+.
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y-------~--~a~~~~~~v~~~la~~l~~L~ 104 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNY-------P--QAVNNTRVVGAELAKFLDFLV 104 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccCh-------H--HHHHhHHHHHHHHHHHHHHHH
Confidence 3457799999987754 3455566665554 579999999953211000 0 001112233457778888876
Q ss_pred hc---CCCeEEEEEEeccHHHHHHhhcC--CCccEEEEecCCC
Q 024721 136 EK---GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSN 173 (263)
Q Consensus 136 ~~---~~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~ 173 (263)
+. +.+++.++|||+||.++..++.. ++++.++++.|..
T Consensus 105 ~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 105 DNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 64 45789999999999999998844 4899999998765
No 125
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.97 E-value=2.2e-08 Score=87.02 Aligned_cols=118 Identities=14% Similarity=0.213 Sum_probs=84.0
Q ss_pred CCCeEEEEEEeccHHHHHHhhcCC---CccEEEEec-CCC-------CChhhhhcccccEEEEecCCCCCCChHHHHHHH
Q 024721 138 GVSAVGAAGFCWGGKVAVKLASNQ---DVQAAVLLH-PSN-------VTEDEIKVVKVPIAVLGAERDNGLPPAQMKRFD 206 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a~~~---~i~~~v~~~-~~~-------~~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~ 206 (263)
...+|+++|+|||+.++..+.-.. .++++|++. |.. ...+.+.++..|+||+.|.+|..+++...+.+.
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vr 327 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVR 327 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCcchhhHhcCCceEEEecCCcccCCHHHHHHHH
Confidence 456999999999988887766322 588888864 221 223567788999999999999999999999999
Q ss_pred HHHHcCCCCceeEEEcCCCCccccccCCCCChhh---hhHHHHHHHHHHHHHHHHh
Q 024721 207 EILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFA---VNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 207 ~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~---~~~~~~~~~~~~~fl~~~l 259 (263)
+++ ++ ..+++++.+++|.+.........+. .+......++|.+|+...+
T Consensus 328 eKM-qA---~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~~l 379 (784)
T KOG3253|consen 328 EKM-QA---EVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTIAL 379 (784)
T ss_pred HHh-hc---cceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHHhh
Confidence 998 43 6889999999999976553322111 1223344455555555444
No 126
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.95 E-value=8.7e-08 Score=76.67 Aligned_cols=154 Identities=22% Similarity=0.356 Sum_probs=94.1
Q ss_pred CeeEEEEecccCCCchhhHHHHHHHHhC--CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 60 KKAVLMISDIYGDEPPIYRSVADKVAGA--GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~~~~~~~~l~~~--G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
.++++++||+.+... .+......+... .|.++.+|.+ |.+.+. . . ........+++..+++. .
T Consensus 21 ~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~-g~g~s~-~--~-------~~~~~~~~~~~~~~~~~---~ 85 (282)
T COG0596 21 GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLR-GHGRSD-P--A-------GYSLSAYADDLAALLDA---L 85 (282)
T ss_pred CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEeccc-CCCCCC-c--c-------cccHHHHHHHHHHHHHH---h
Confidence 457999999887653 333422333332 1999999996 554332 0 0 01111123444444443 3
Q ss_pred CCCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCC---------------------------C--------------
Q 024721 138 GVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSN---------------------------V-------------- 174 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~---------------------------~-------------- 174 (263)
+..++.++|||+||.+++.++. .+ +++++++..+.. .
T Consensus 86 ~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (282)
T COG0596 86 GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGL 165 (282)
T ss_pred CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccc
Confidence 5556999999999999999873 33 466665544210 0
Q ss_pred ------------C------------------------------h-----hhhhcccccEEEEecCCCCCCChHHHHHHHH
Q 024721 175 ------------T------------------------------E-----DEIKVVKVPIAVLGAERDNGLPPAQMKRFDE 207 (263)
Q Consensus 175 ------------~------------------------------~-----~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~ 207 (263)
. . .....+++|+++++|++|.+.|......+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~ 245 (282)
T COG0596 166 LAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAA 245 (282)
T ss_pred cccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHh
Confidence 0 0 1234456999999999997777655444554
Q ss_pred HHHcCCCCceeEEEcCCCCcccccc
Q 024721 208 ILYAKPKFDHLVKTYPGVCHGWTVR 232 (263)
Q Consensus 208 ~l~~~~~~~~~~~~~~g~~H~~~~~ 232 (263)
.++ + ..++..+++++|.....
T Consensus 246 ~~~---~-~~~~~~~~~~gH~~~~~ 266 (282)
T COG0596 246 ALP---N-DARLVVIPGAGHFPHLE 266 (282)
T ss_pred hCC---C-CceEEEeCCCCCcchhh
Confidence 542 1 47889999999977653
No 127
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.93 E-value=5.1e-08 Score=77.89 Aligned_cols=169 Identities=20% Similarity=0.288 Sum_probs=102.0
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCCC
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGVS 140 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 140 (263)
++|+++|++.|.. ..|..+++.+....+.|+.++++ |.. .... ......+-+...++.+....++
T Consensus 1 ~~lf~~p~~gG~~-~~y~~la~~l~~~~~~v~~i~~~-~~~-~~~~------------~~~si~~la~~y~~~I~~~~~~ 65 (229)
T PF00975_consen 1 RPLFCFPPAGGSA-SSYRPLARALPDDVIGVYGIEYP-GRG-DDEP------------PPDSIEELASRYAEAIRARQPE 65 (229)
T ss_dssp -EEEEESSTTCSG-GGGHHHHHHHTTTEEEEEEECST-TSC-TTSH------------EESSHHHHHHHHHHHHHHHTSS
T ss_pred CeEEEEcCCccCH-HHHHHHHHhCCCCeEEEEEEecC-CCC-CCCC------------CCCCHHHHHHHHHHHhhhhCCC
Confidence 3689999988864 68899999998755888999883 332 0000 0011112233344444444444
Q ss_pred -eEEEEEEeccHHHHHHhhcC-----CCccEEEEecCCCCC---------------------------------------
Q 024721 141 -AVGAAGFCWGGKVAVKLASN-----QDVQAAVLLHPSNVT--------------------------------------- 175 (263)
Q Consensus 141 -~i~~~G~S~Gg~~a~~~a~~-----~~i~~~v~~~~~~~~--------------------------------------- 175 (263)
++.++|||+||.+|+.+|+. ..+..++++.+....
T Consensus 66 gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (229)
T PF00975_consen 66 GPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARL 145 (229)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHH
T ss_pred CCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHH
Confidence 99999999999999999832 368889998844210
Q ss_pred ----------hhh--hhcc---cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhh
Q 024721 176 ----------EDE--IKVV---KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFA 240 (263)
Q Consensus 176 ----------~~~--~~~~---~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~ 240 (263)
... .... .+|.++....+|+........ ..+.+........+++.++| +|..... ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~W~~~~~~~~~~~~v~G-~H~~~l~-~~----- 217 (229)
T PF00975_consen 146 LRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLE-EADRWWDYTSGDVEVHDVPG-DHFSMLK-PH----- 217 (229)
T ss_dssp HHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGG-HHCHHHGCBSSSEEEEEESS-ETTGHHS-TT-----
T ss_pred HHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhh-hHHHHHHhcCCCcEEEEEcC-CCcEecc-hH-----
Confidence 000 1111 246888888888877654111 11212233344688999996 9977654 22
Q ss_pred hhHHHHHHHHHHHHH
Q 024721 241 VNSAAEAHEDMINWF 255 (263)
Q Consensus 241 ~~~~~~~~~~~~~fl 255 (263)
..++.+.|.+||
T Consensus 218 ---~~~i~~~I~~~~ 229 (229)
T PF00975_consen 218 ---VAEIAEKIAEWL 229 (229)
T ss_dssp ---HHHHHHHHHHHH
T ss_pred ---HHHHHHHHhccC
Confidence 345555555554
No 128
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.92 E-value=2.8e-08 Score=83.45 Aligned_cols=164 Identities=16% Similarity=0.160 Sum_probs=111.3
Q ss_pred eeEEEeCCCCC---CeeEEEEecccCCC----chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCc
Q 024721 49 LKAYVTGPPHS---KKAVLMISDIYGDE----PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTD 121 (263)
Q Consensus 49 ~~~~~~~~~~~---~~~vv~~h~~~g~~----~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 121 (263)
.....+.|.+. ++|++++|...... -..-..+...+.+.|..|.+++++. .. .. ......+
T Consensus 93 ~~liqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~n-Pd-------~~----~~~~~~e 160 (445)
T COG3243 93 LELIQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRN-PD-------AS----LAAKNLE 160 (445)
T ss_pred hhhhccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccC-ch-------Hh----hhhccHH
Confidence 33444445433 36788888765421 1122568889999999999999841 11 00 0112334
Q ss_pred ccc-ccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhhcC---CCccEEEEecCCCC----------------------
Q 024721 122 KGY-EDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLASN---QDVQAAVLLHPSNV---------------------- 174 (263)
Q Consensus 122 ~~~-~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~~---~~i~~~v~~~~~~~---------------------- 174 (263)
+++ +++...++.+++. +.++|-++|+|.||.++..++.. .+|+.+..+.....
T Consensus 161 dYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~ 240 (445)
T COG3243 161 DYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDAD 240 (445)
T ss_pred HHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhh
Confidence 555 7788888888877 55799999999999999886522 24777666432110
Q ss_pred --------------------------------------------------------------------------------
Q 024721 175 -------------------------------------------------------------------------------- 174 (263)
Q Consensus 175 -------------------------------------------------------------------------------- 174 (263)
T Consensus 241 i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~ 320 (445)
T COG3243 241 IVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVS 320 (445)
T ss_pred hhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEEC
Confidence
Q ss_pred -ChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccc
Q 024721 175 -TEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGW 229 (263)
Q Consensus 175 -~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 229 (263)
..-++.+++||++++.+++|.+.|.+.+......+ .| +++++..+ .||--
T Consensus 321 G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~---~g-~~~f~l~~-sGHIa 371 (445)
T COG3243 321 GTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLL---GG-EVTFVLSR-SGHIA 371 (445)
T ss_pred CEEechhhcccceEEEeecccccCCHHHHHHHHHhc---CC-ceEEEEec-CceEE
Confidence 01257889999999999999999999888777666 22 68888887 59943
No 129
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.89 E-value=1.4e-07 Score=70.03 Aligned_cols=106 Identities=12% Similarity=0.097 Sum_probs=77.2
Q ss_pred CCeEEEEEEeccHHHHHHhhcC--CCccEEEEecCCCCCh-------------hhhhcccccEEEEecCCCCCCChHHHH
Q 024721 139 VSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSNVTE-------------DEIKVVKVPIAVLGAERDNGLPPAQMK 203 (263)
Q Consensus 139 ~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~~~~-------------~~~~~~~~p~l~i~G~~D~~~~~~~~~ 203 (263)
.+++++++||+|+..++.++.+ ..|++++++.|..... ....+..-|.+++.+.+|++++.+..+
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~vvaSrnDp~~~~~~a~ 137 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVVVASRNDPYVSYEHAE 137 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCCCccccCCCceeEEEecCCCCCCHHHHH
Confidence 4569999999999999998843 5999999999876432 112334558999999999999999999
Q ss_pred HHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 204 RFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 204 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
.+.+.+ ...+.....+||...... . ....+....+.+|+.+
T Consensus 138 ~~a~~w------gs~lv~~g~~GHiN~~sG-~------g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 138 DLANAW------GSALVDVGEGGHINAESG-F------GPWPEGYALLAQLLSR 178 (181)
T ss_pred HHHHhc------cHhheecccccccchhhc-C------CCcHHHHHHHHHHhhh
Confidence 999998 356778888899443322 2 1244555555555543
No 130
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.89 E-value=1.8e-08 Score=87.01 Aligned_cols=105 Identities=16% Similarity=0.166 Sum_probs=69.8
Q ss_pred CCeeEEEEecccCCC--chhhHHHHHHHHhC--CCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHH
Q 024721 59 SKKAVLMISDIYGDE--PPIYRSVADKVAGA--GFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAA 133 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~--~~~~~~~~~~l~~~--G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 133 (263)
.+|++|++||+.+.. ..+...+++.|.+. .|+|+++|++ +|.+..+... ........++..++++
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~----------~~t~~vg~~la~lI~~ 109 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA----------AYTKLVGKDVAKFVNW 109 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc----------ccHHHHHHHHHHHHHH
Confidence 357889999987542 22334466665432 6999999996 2322111100 0112333567778887
Q ss_pred HHhc---CCCeEEEEEEeccHHHHHHhhcC--CCccEEEEecCCC
Q 024721 134 LKEK---GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSN 173 (263)
Q Consensus 134 l~~~---~~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~ 173 (263)
|.+. +.+++.++|||+||.++..++.. .++..++++.|..
T Consensus 110 L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 110 MQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred HHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 7543 46799999999999999998843 4899999999864
No 131
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.88 E-value=2.4e-06 Score=71.26 Aligned_cols=184 Identities=13% Similarity=0.168 Sum_probs=108.4
Q ss_pred eEEEEecccCCC-c-hhhHHHHHHHHhCCCEEEeecCCC--CC--CCCCCC---------CCcchh------------hh
Q 024721 62 AVLMISDIYGDE-P-PIYRSVADKVAGAGFLVVAPDFFH--GD--AANPSN---------PKYDKD------------TW 114 (263)
Q Consensus 62 ~vv~~h~~~g~~-~-~~~~~~~~~l~~~G~~vv~~d~~~--g~--~~~~~~---------~~~~~~------------~~ 114 (263)
.||++|+..... + .....+.+.|.+.||.++++..+. +. +..... ...... +.
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 466667654332 1 245667788989999999987742 11 000000 000000 00
Q ss_pred hhcCCCccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC---CCccEEEEecCCCCCh-------hhhhcccc
Q 024721 115 RKNHTTDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN---QDVQAAVLLHPSNVTE-------DEIKVVKV 184 (263)
Q Consensus 115 ~~~~~~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~---~~i~~~v~~~~~~~~~-------~~~~~~~~ 184 (263)
. ....+.....+.+++.++.+++..+++++||+.|+..+..+..+ +.+.++|++++..... +.+..++.
T Consensus 169 ~-~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n~~l~~~la~l~i 247 (310)
T PF12048_consen 169 R-EAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRNPALAEQLAQLKI 247 (310)
T ss_pred h-HHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhhhhHHHHhhccCC
Confidence 0 00012344567788888888777789999999999999997643 2688999999876432 34567899
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHH
Q 024721 185 PIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKH 258 (263)
Q Consensus 185 p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 258 (263)
|+|=|++.+ ..........=....+++.....+-..+.+..|.... ..+.+.++|..||+++
T Consensus 248 PvLDi~~~~-~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-----------~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 248 PVLDIYSAD-NPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-----------WQEQLLRRIRGWLKRH 309 (310)
T ss_pred CEEEEecCC-ChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhh-----------HHHHHHHHHHHHHHhh
Confidence 999999866 3221222221122222333334555566665554421 1234999999999875
No 132
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.86 E-value=5e-08 Score=74.34 Aligned_cols=94 Identities=18% Similarity=0.126 Sum_probs=65.7
Q ss_pred CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC-----------------------------hhhhhcccccE
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT-----------------------------EDEIKVVKVPI 186 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~-----------------------------~~~~~~~~~p~ 186 (263)
++.++++.||||||.-++..+ +++ +.+.+-++.|...+ ..........+
T Consensus 139 d~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~i 218 (283)
T KOG3101|consen 139 DPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDI 218 (283)
T ss_pred cchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccE
Confidence 566899999999999999876 444 67777666665421 12344556679
Q ss_pred EEEecCCCCCCChHH-HHHHHHHHHcCCCCceeEEEcCCCCccccc
Q 024721 187 AVLGAERDNGLPPAQ-MKRFDEILYAKPKFDHLVKTYPGVCHGWTV 231 (263)
Q Consensus 187 l~i~G~~D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 231 (263)
|+-+|+.|++.+... -+.+.++.+.....++.+...+|-.|++..
T Consensus 219 lIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 219 LIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYF 264 (283)
T ss_pred EEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcceee
Confidence 999999999987322 344566664333356788888988898754
No 133
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.86 E-value=3.9e-08 Score=85.69 Aligned_cols=201 Identities=15% Similarity=0.163 Sum_probs=137.6
Q ss_pred eCC--eeEEEeCC---CCCCeeEEEEecccCC-CchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCC
Q 024721 46 LGG--LKAYVTGP---PHSKKAVLMISDIYGD-EPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 119 (263)
Q Consensus 46 ~~~--~~~~~~~~---~~~~~~vv~~h~~~g~-~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~ 119 (263)
.+| ++.++... .++.|.+|.-.||+.- ..+.|......+.++|...+..+.|+|.-+.+.. .....+.+
T Consensus 402 kDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~W-----H~Aa~k~n 476 (648)
T COG1505 402 KDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEW-----HQAGMKEN 476 (648)
T ss_pred CCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHH-----HHHHhhhc
Confidence 355 77777641 2246778888888873 3567777778888999999999998554322211 11122344
Q ss_pred CccccccHHHHHHHHHhcC---CCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC--------------------
Q 024721 120 TDKGYEDAKPVIAALKEKG---VSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV-------------------- 174 (263)
Q Consensus 120 ~~~~~~d~~~~~~~l~~~~---~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~-------------------- 174 (263)
.++..+|+.++.+.|.+++ ++++++.|-|.||.++-.+. +.| .+-|+++-.|...
T Consensus 477 rq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~P 556 (648)
T COG1505 477 KQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNP 556 (648)
T ss_pred chhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhcCCC
Confidence 5677899999999998884 56999999999999887755 555 5566666444321
Q ss_pred -Chh---------hhhcc-----cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChh
Q 024721 175 -TED---------EIKVV-----KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTF 239 (263)
Q Consensus 175 -~~~---------~~~~~-----~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~ 239 (263)
.++ .+.++ =.|+||-.+.+|+-|.|....++..+|. ..+.++-+.+--++||+-..+.
T Consensus 557 d~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~-e~~~pv~~~e~t~gGH~g~~~~------ 629 (648)
T COG1505 557 DDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQ-EVGAPVLLREETKGGHGGAAPT------ 629 (648)
T ss_pred CCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHH-hcCCceEEEeecCCcccCCCCh------
Confidence 111 11122 2589999999999999999999999994 4556777777667899774432
Q ss_pred hhhHHHHHHHHHHHHHHHHhh
Q 024721 240 AVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 240 ~~~~~~~~~~~~~~fl~~~l~ 260 (263)
.....-...+..||.++|.
T Consensus 630 --~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 630 --AEIARELADLLAFLLRTLG 648 (648)
T ss_pred --HHHHHHHHHHHHHHHHhhC
Confidence 2234555678888888774
No 134
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.83 E-value=1.3e-08 Score=93.12 Aligned_cols=98 Identities=19% Similarity=0.188 Sum_probs=67.5
Q ss_pred CeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCC-CCCC-CCCCCC-----Ccchhhhhh-------cCCCccccc
Q 024721 60 KKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGDA-ANPSNP-----KYDKDTWRK-------NHTTDKGYE 125 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~-~g~~-~~~~~~-----~~~~~~~~~-------~~~~~~~~~ 125 (263)
.|+||++||..+.. ..|..+++.|+++||.|+++|++ ||.. +..... ......+++ +..+.+.+.
T Consensus 449 ~P~VVllHG~~g~~-~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 449 WPVVIYQHGITGAK-ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CcEEEEeCCCCCCH-HHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 35677778777765 57889999999999999999996 5543 211100 011111211 224567778
Q ss_pred cHHHHHHHHH------h-------cCCCeEEEEEEeccHHHHHHhh
Q 024721 126 DAKPVIAALK------E-------KGVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 126 d~~~~~~~l~------~-------~~~~~i~~~G~S~Gg~~a~~~a 158 (263)
|+..+...+. + .+..+++++||||||.++..++
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~ 573 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFI 573 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHH
Confidence 8888888887 1 2356999999999999999976
No 135
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.80 E-value=3.5e-07 Score=75.90 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=63.5
Q ss_pred CCeeEEEEecccCCCc--h--------hhHHHH---HHHHhCCCEEEeecCCCCC-CCC-CCCCCcchhhhhhcCCCccc
Q 024721 59 SKKAVLMISDIYGDEP--P--------IYRSVA---DKVAGAGFLVVAPDFFHGD-AAN-PSNPKYDKDTWRKNHTTDKG 123 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~--~--------~~~~~~---~~l~~~G~~vv~~d~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~ 123 (263)
...+||++|+..|... . ||..+. +.+-..-|.|++.|..+|. |.+ |.+.... +..+....+.-.
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~-g~~yg~~FP~~t 128 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG-GKPYGSDFPVIT 128 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC-CCccccCCCccc
Confidence 3467777777666321 1 343332 1233335999999997544 322 2222222 222222223344
Q ss_pred cccHHHHHHHHH-hcCCCeEE-EEEEeccHHHHHHhh-cCC-CccEEEEecC
Q 024721 124 YEDAKPVIAALK-EKGVSAVG-AAGFCWGGKVAVKLA-SNQ-DVQAAVLLHP 171 (263)
Q Consensus 124 ~~d~~~~~~~l~-~~~~~~i~-~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~ 171 (263)
++|...+-+.+. ..+.+++. ++|-||||+.++..+ ..| +++.++.+..
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 456555555553 34888887 899999999999977 444 6666665443
No 136
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.75 E-value=1.1e-06 Score=68.78 Aligned_cols=177 Identities=18% Similarity=0.146 Sum_probs=112.0
Q ss_pred eeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhC-C--CEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccc
Q 024721 49 LKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGA-G--FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYE 125 (263)
Q Consensus 49 ~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~-G--~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (263)
+..++..+...++.++++.|-.|.. .+|..+++.|.+. + +.+.++... |...-+....++-. . ...+.-...+
T Consensus 18 ~~~~v~~~~~~~~li~~IpGNPG~~-gFY~~F~~~L~~~l~~r~~~wtIsh~-~H~~~P~sl~~~~s-~-~~~eifsL~~ 93 (301)
T KOG3975|consen 18 LKPWVTKSGEDKPLIVWIPGNPGLL-GFYTEFARHLHLNLIDRLPVWTISHA-GHALMPASLREDHS-H-TNEEIFSLQD 93 (301)
T ss_pred eeeeeccCCCCceEEEEecCCCCch-hHHHHHHHHHHHhcccccceeEEecc-ccccCCcccccccc-c-ccccccchhh
Confidence 3344444445566788888888876 5899999988875 2 336655542 22211111111100 0 1122334456
Q ss_pred cHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhhc-C---CCccEEEEecCCCC-------------------------
Q 024721 126 DAKPVIAALKEK--GVSAVGAAGFCWGGKVAVKLAS-N---QDVQAAVLLHPSNV------------------------- 174 (263)
Q Consensus 126 d~~~~~~~l~~~--~~~~i~~~G~S~Gg~~a~~~a~-~---~~i~~~v~~~~~~~------------------------- 174 (263)
++..-++++++. ...++.++|||-|+.+.+.+.. . ..++.+++..|-..
T Consensus 94 QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt 173 (301)
T KOG3975|consen 94 QVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLT 173 (301)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhhee
Confidence 788888888876 3459999999999999999763 1 15555555444320
Q ss_pred -------------------------------------------------C-----------hhhhhcccccEEEEecCCC
Q 024721 175 -------------------------------------------------T-----------EDEIKVVKVPIAVLGAERD 194 (263)
Q Consensus 175 -------------------------------------------------~-----------~~~~~~~~~p~l~i~G~~D 194 (263)
. .+-.+.=.+-+-+.+|.+|
T Consensus 174 ~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~D 253 (301)
T KOG3975|consen 174 SYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTND 253 (301)
T ss_pred eeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCC
Confidence 0 0111222457889999999
Q ss_pred CCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccC
Q 024721 195 NGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRY 233 (263)
Q Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~ 233 (263)
.++|.+....+++.+++ .+.++.+ ++..|+|....
T Consensus 254 gW~p~~~~d~~kdd~~e---ed~~Lde-dki~HAFV~~~ 288 (301)
T KOG3975|consen 254 GWVPSHYYDYYKDDVPE---EDLKLDE-DKIPHAFVVKH 288 (301)
T ss_pred CCcchHHHHHHhhhcch---hceeecc-ccCCcceeecc
Confidence 99999988888888843 3788888 67999997643
No 137
>PRK04940 hypothetical protein; Provisional
Probab=98.75 E-value=2.1e-07 Score=70.37 Aligned_cols=97 Identities=11% Similarity=0.052 Sum_probs=69.0
Q ss_pred CeEEEEEEeccHHHHHHhhcCCCccEEEEecCCCCChh---------------------hhhcccc--cEEEEecCCCCC
Q 024721 140 SAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVTED---------------------EIKVVKV--PIAVLGAERDNG 196 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~~~---------------------~~~~~~~--p~l~i~G~~D~~ 196 (263)
+++.++|.|+||+.|.++|....++++ +++|...+.. +++ ++. ..+++..+.|++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aV-LiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~-~~~p~r~~vllq~gDEv 137 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQV-IFNPNLFPEENMEGKIDRPEEYADIATKCVTNFR-EKNRDRCLVILSRNDEV 137 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEE-EECCCCChHHHHHHHhCCCcchhhhhHHHHHHhh-hcCcccEEEEEeCCCcc
Confidence 479999999999999999987777665 4566553311 222 233 358899999999
Q ss_pred CChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 197 LPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 197 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
.....+.+.+.. -.++.+.+|+.|.|.. -++....|++|+++
T Consensus 138 LDyr~a~~~y~~-------~y~~~v~~GGdH~f~~------------fe~~l~~I~~F~~~ 179 (180)
T PRK04940 138 LDSQRTAEELHP-------YYEIVWDEEQTHKFKN------------ISPHLQRIKAFKTL 179 (180)
T ss_pred cCHHHHHHHhcc-------CceEEEECCCCCCCCC------------HHHHHHHHHHHHhc
Confidence 986554433322 2268899999999943 46788899999863
No 138
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.69 E-value=2.8e-07 Score=74.29 Aligned_cols=185 Identities=16% Similarity=0.154 Sum_probs=109.2
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHH-hCCC--EE--EeecCCCCC----CCCCCCCCcch--hhhhhcC--CCccccc
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVA-GAGF--LV--VAPDFFHGD----AANPSNPKYDK--DTWRKNH--TTDKGYE 125 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~-~~G~--~v--v~~d~~~g~----~~~~~~~~~~~--~~~~~~~--~~~~~~~ 125 (263)
...|+|++||+.|.. ..+..+.+.+. +.|. .+ +.++- .|. |.-.......+ =.+.... ++.....
T Consensus 10 ~~tPTifihG~~gt~-~s~~~mi~~~~~~~~~~~~~l~v~V~~-~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYGGTA-NSFNHMINRLENKQGVAQKVLTVTVSK-NGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TTGGC-CCCHHHHHHHHHCSTS-S-EEEEEEET-TSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCCCCh-hHHHHHHHHHHhhcCCCceEEEEEECC-CCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 346899999988875 46788999996 6652 33 33333 332 11000000000 0000111 1233445
Q ss_pred cHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhhc-------CCCccEEEEecCCCCCh---------------------
Q 024721 126 DAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLAS-------NQDVQAAVLLHPSNVTE--------------------- 176 (263)
Q Consensus 126 d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~-------~~~i~~~v~~~~~~~~~--------------------- 176 (263)
-+..++.+|.++ ..+++=++||||||.....++. -|+++.+|.+.+.+...
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~ 167 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMT 167 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccC
Confidence 678888888877 7889999999999999998651 24789999987654210
Q ss_pred ---hh-h----hc--ccccEEEEecC------CCCCCChHHHHHHHHHHHcCCCCceeEEEcCC--CCccccccCCCCCh
Q 024721 177 ---DE-I----KV--VKVPIAVLGAE------RDNGLPPAQMKRFDEILYAKPKFDHLVKTYPG--VCHGWTVRYFVNDT 238 (263)
Q Consensus 177 ---~~-~----~~--~~~p~l~i~G~------~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~~~~~~~~~~~ 238 (263)
.. + .. -++.+|-|.|. .|-.+|...++.+...++. .....+..++.| +.|+-..+
T Consensus 168 ~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~-~~~~Y~e~~v~G~~a~HS~Lhe------ 240 (255)
T PF06028_consen 168 PMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKN-RAKSYQEKTVTGKDAQHSQLHE------ 240 (255)
T ss_dssp HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTT-TSSEEEEEEEESGGGSCCGGGC------
T ss_pred HHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhc-ccCceEEEEEECCCCccccCCC------
Confidence 00 1 11 14579999998 7899999988888877743 334666677765 46755442
Q ss_pred hhhhHHHHHHHHHHHHHHH
Q 024721 239 FAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 239 ~~~~~~~~~~~~~~~fl~~ 257 (263)
..++.+.|.+||.+
T Consensus 241 -----N~~V~~~I~~FLw~ 254 (255)
T PF06028_consen 241 -----NPQVDKLIIQFLWG 254 (255)
T ss_dssp -----CHHHHHHHHHHHCT
T ss_pred -----CHHHHHHHHHHhcC
Confidence 25788889999853
No 139
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.67 E-value=3.5e-08 Score=80.00 Aligned_cols=113 Identities=19% Similarity=0.244 Sum_probs=70.0
Q ss_pred HHHHHHHhc---CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC-----------------h-h-----hhh
Q 024721 129 PVIAALKEK---GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT-----------------E-D-----EIK 180 (263)
Q Consensus 129 ~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~-----------------~-~-----~~~ 180 (263)
.++.++.+. ..++.+++|+||||..++.++ ++| .+.++++++|.... . . ...
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 180 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALSQK 180 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHHHT
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhhcc
Confidence 444455443 233499999999999999988 554 89999999965110 0 0 123
Q ss_pred cccccEEEEecCCCCCCCh----------HHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHH
Q 024721 181 VVKVPIAVLGAERDNGLPP----------AQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHED 250 (263)
Q Consensus 181 ~~~~p~l~i~G~~D~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~ 250 (263)
.-..++++.+|+.|..... .....+.+.+ ...+....++.++| +|.+ ......+..
T Consensus 181 ~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~G-~H~~------------~~W~~~l~~ 246 (251)
T PF00756_consen 181 KKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLL-KAKGIPHTYHVFPG-GHDW------------AYWRRRLPD 246 (251)
T ss_dssp TSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHC-CCEECTTESEEEHS-ESSH------------HHHHHHHHH
T ss_pred cCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHH-HHcCCCceEEEecC-ccch------------hhHHHHHHH
Confidence 3456889999999984321 1122233334 34455677788884 7866 335566666
Q ss_pred HHHHH
Q 024721 251 MINWF 255 (263)
Q Consensus 251 ~~~fl 255 (263)
.+.||
T Consensus 247 ~L~~~ 251 (251)
T PF00756_consen 247 ALPWM 251 (251)
T ss_dssp HHHHH
T ss_pred HHhhC
Confidence 66654
No 140
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.65 E-value=9.8e-08 Score=62.71 Aligned_cols=52 Identities=31% Similarity=0.395 Sum_probs=37.3
Q ss_pred eeEEEeCCCCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCC-CCC
Q 024721 49 LKAYVTGPPHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGD 100 (263)
Q Consensus 49 ~~~~~~~~~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~-~g~ 100 (263)
+..+...|+++..++|++.||++.....|..+++.|+++||.|+++|+| +|.
T Consensus 4 L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~ 56 (79)
T PF12146_consen 4 LFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGR 56 (79)
T ss_pred EEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCC
Confidence 3344456665534555555556665678999999999999999999996 444
No 141
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.65 E-value=1.6e-07 Score=82.43 Aligned_cols=191 Identities=16% Similarity=0.142 Sum_probs=121.5
Q ss_pred CCCeeEEEEecccCCC-chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 58 HSKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
+++|.+|..+|++|-+ .++|..-...|..+|+..+..|-|+|..........+ ......+-.+|+.+.+++|-+
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G-----~lakKqN~f~Dfia~AeyLve 542 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDG-----RLAKKQNSFDDFIACAEYLVE 542 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhcc-----chhhhcccHHHHHHHHHHHHH
Confidence 4678899999999854 2344443345667899999999985432111110000 011235667899999999998
Q ss_pred cC---CCeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCCC---------------------h------------hh
Q 024721 137 KG---VSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNVT---------------------E------------DE 178 (263)
Q Consensus 137 ~~---~~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~~---------------------~------------~~ 178 (263)
.+ ++++.+.|.|.||.++..+.++ | -++++++-.|.... + ..
T Consensus 543 ~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~p 622 (712)
T KOG2237|consen 543 NGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSP 622 (712)
T ss_pred cCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChhhhhhhheecccCc
Confidence 74 6799999999999999998844 4 67777775554310 0 01
Q ss_pred hhcc-----cccEEEEecCCCCCCChHHHHHHHHHHHcCC------CCceeEEEcCCCCccccccCCCCChhhhhHHHHH
Q 024721 179 IKVV-----KVPIAVLGAERDNGLPPAQMKRFDEILYAKP------KFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEA 247 (263)
Q Consensus 179 ~~~~-----~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~ 247 (263)
..++ =..+|+..+.+|+-+++-....+.++|+.+. ..++-+.+..++||+.-.+. ...-+-
T Consensus 623 v~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~--------~k~~~E 694 (712)
T KOG2237|consen 623 VDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPR--------FKQIEE 694 (712)
T ss_pred cCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCch--------HHHHHH
Confidence 1111 1358999999988887766666666665211 12567888999999764322 112334
Q ss_pred HHHHHHHHHHHhhh
Q 024721 248 HEDMINWFEKHVKC 261 (263)
Q Consensus 248 ~~~~~~fl~~~l~~ 261 (263)
.....+||.+.+..
T Consensus 695 ~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 695 AAFRYAFLAKMLNS 708 (712)
T ss_pred HHHHHHHHHHHhcC
Confidence 45667787776543
No 142
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.65 E-value=3.5e-06 Score=71.19 Aligned_cols=108 Identities=12% Similarity=0.138 Sum_probs=86.4
Q ss_pred CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEecCCCC------------------------------------------
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLHPSNV------------------------------------------ 174 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~~~~~------------------------------------------ 174 (263)
..++.++.|.|-=|..++.+| .++||++++.+.=...
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~ 249 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLM 249 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHH
Confidence 577999999999999999977 5679999988331110
Q ss_pred ---C-hhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHH
Q 024721 175 ---T-EDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHED 250 (263)
Q Consensus 175 ---~-~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~ 250 (263)
+ .....+++.|-|++.|..|+++.++....+++.|+ | ++.+..+|+++|+... .++.+.
T Consensus 250 ~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~---G-~K~lr~vPN~~H~~~~-------------~~~~~~ 312 (367)
T PF10142_consen 250 QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLP---G-EKYLRYVPNAGHSLIG-------------SDVVQS 312 (367)
T ss_pred HhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCC---C-CeeEEeCCCCCcccch-------------HHHHHH
Confidence 0 12345779999999999999999999999999994 3 6889999999998854 477788
Q ss_pred HHHHHHHHhhhC
Q 024721 251 MINWFEKHVKCD 262 (263)
Q Consensus 251 ~~~fl~~~l~~~ 262 (263)
+..|++..+.+.
T Consensus 313 l~~f~~~~~~~~ 324 (367)
T PF10142_consen 313 LRAFYNRIQNGR 324 (367)
T ss_pred HHHHHHHHHcCC
Confidence 999998776553
No 143
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.56 E-value=1.6e-07 Score=73.88 Aligned_cols=88 Identities=18% Similarity=0.303 Sum_probs=54.2
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCE---EEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFL---VVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~---vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
.||||+||..+.....|..++++|.++||. +++++| +..... . . .. ......+...++..+++.+++.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~ty-g~~~~~-~----~-~~--~~~~~~~~~~~l~~fI~~Vl~~ 72 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTY-GSGNGS-P----S-VQ--NAHMSCESAKQLRAFIDAVLAY 72 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE---S-CCHH-T----H-HH--HHHB-HHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccC-CCCCCC-C----c-cc--ccccchhhHHHHHHHHHHHHHh
Confidence 479999999885557889999999999999 799998 222100 0 0 00 0111223346788888877765
Q ss_pred -CCCeEEEEEEeccHHHHHHhh
Q 024721 138 -GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 138 -~~~~i~~~G~S~Gg~~a~~~a 158 (263)
+. +|-++||||||.++-.+.
T Consensus 73 TGa-kVDIVgHS~G~~iaR~yi 93 (219)
T PF01674_consen 73 TGA-KVDIVGHSMGGTIARYYI 93 (219)
T ss_dssp HT---EEEEEETCHHHHHHHHH
T ss_pred hCC-EEEEEEcCCcCHHHHHHH
Confidence 66 999999999999998876
No 144
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.47 E-value=1.7e-05 Score=63.95 Aligned_cols=169 Identities=11% Similarity=0.098 Sum_probs=111.8
Q ss_pred eEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcC---
Q 024721 62 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKG--- 138 (263)
Q Consensus 62 ~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~--- 138 (263)
++|++.||.|.........++...+.|+.++.+-.....- .... .....-+..+++.+.+..
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~-------------~~~~--~~~~~~~~~l~~~l~~~~~~~ 65 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADF-------------FWPS--KRLAPAADKLLELLSDSQSAS 65 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHH-------------eeec--cchHHHHHHHHHHhhhhccCC
Confidence 4788889998876666667777777899999987631110 0000 122233444555555442
Q ss_pred CCeEEEEEEeccHHHHHHh-h---c--C------CCccEEEEecCC-C----------------C-------C-------
Q 024721 139 VSAVGAAGFCWGGKVAVKL-A---S--N------QDVQAAVLLHPS-N----------------V-------T------- 175 (263)
Q Consensus 139 ~~~i~~~G~S~Gg~~a~~~-a---~--~------~~i~~~v~~~~~-~----------------~-------~------- 175 (263)
..+|.+-.+|.||...+.. . . . +++++.|.=+.. . . .
T Consensus 66 ~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (240)
T PF05705_consen 66 PPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFL 145 (240)
T ss_pred CCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHH
Confidence 2389999999999888873 2 1 1 247777762211 0 0 0
Q ss_pred -----------------------hhh--hhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 176 -----------------------EDE--IKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 176 -----------------------~~~--~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
.+. ....++|-|+++++.|.+++.+++++..+..++ .|.+++...+++..|.-+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~-~G~~V~~~~f~~S~HV~H 224 (240)
T PF05705_consen 146 LRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARR-KGWDVRAEKFEDSPHVAH 224 (240)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHH-cCCeEEEecCCCCchhhh
Confidence 001 122358999999999999999999999999854 677899999999999777
Q ss_pred ccCCCCChhhhhHHHHHHHHHHHHH
Q 024721 231 VRYFVNDTFAVNSAAEAHEDMINWF 255 (263)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~fl 255 (263)
.+.+ .++-++.+.+|+
T Consensus 225 ~r~~---------p~~Y~~~v~~fw 240 (240)
T PF05705_consen 225 LRKH---------PDRYWRAVDEFW 240 (240)
T ss_pred cccC---------HHHHHHHHHhhC
Confidence 6543 367777777663
No 145
>COG0627 Predicted esterase [General function prediction only]
Probab=98.45 E-value=4.3e-06 Score=69.51 Aligned_cols=109 Identities=21% Similarity=0.236 Sum_probs=79.8
Q ss_pred eEEEEEEeccHHHHHHhh-cC-CCccEEEEecCCCCCh------------------------------------hhhh--
Q 024721 141 AVGAAGFCWGGKVAVKLA-SN-QDVQAAVLLHPSNVTE------------------------------------DEIK-- 180 (263)
Q Consensus 141 ~i~~~G~S~Gg~~a~~~a-~~-~~i~~~v~~~~~~~~~------------------------------------~~~~-- 180 (263)
+.+++||||||.-|+.+| .+ ++++.+.+++|..... ....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l 232 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKL 232 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHHHhcCCCccccccccCchhHHHHh
Confidence 799999999999999988 55 4788877776643210 0111
Q ss_pred --c----------ccccEEEEecCCCCCCC--hHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHH
Q 024721 181 --V----------VKVPIAVLGAERDNGLP--PAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAE 246 (263)
Q Consensus 181 --~----------~~~p~l~i~G~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~ 246 (263)
. ...++++-+|..|.+.. ....+.+.+++ .+.+.+..+...++..|++ .....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~-~~~g~~~~~~~~~~G~Hsw------------~~w~~ 299 (316)
T COG0627 233 VANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEAL-RAAGIPNGVRDQPGGDHSW------------YFWAS 299 (316)
T ss_pred hhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHH-HhcCCCceeeeCCCCCcCH------------HHHHH
Confidence 1 34577788898888764 33356677887 5566688888888889988 44788
Q ss_pred HHHHHHHHHHHHhhhC
Q 024721 247 AHEDMINWFEKHVKCD 262 (263)
Q Consensus 247 ~~~~~~~fl~~~l~~~ 262 (263)
.++..+.|+.+.|...
T Consensus 300 ~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 300 QLADHLPWLAGALGLA 315 (316)
T ss_pred HHHHHHHHHHHHhccC
Confidence 8999999999888653
No 146
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.42 E-value=1e-05 Score=67.77 Aligned_cols=141 Identities=15% Similarity=0.175 Sum_probs=90.1
Q ss_pred EEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-CCCeEE
Q 024721 65 MISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-GVSAVG 143 (263)
Q Consensus 65 ~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~ 143 (263)
++..|-|+-...-+.+++.|.++|+.|+-+|.. ..|+...++++..+|+..++++...+ +.+++.
T Consensus 264 v~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsL--------------RYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~ 329 (456)
T COG3946 264 VFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSL--------------RYFWSERTPEQIAADLSRLIRFYARRWGAKRVL 329 (456)
T ss_pred EEEecCCchhhhhHHHHHHHHHCCCceeeeehh--------------hhhhccCCHHHHHHHHHHHHHHHHHhhCcceEE
Confidence 333444433345578999999999999999973 12233446678889999999988876 778999
Q ss_pred EEEEeccHHHHHHhhcC------------------C------CccEEEEecCCC--CChhhhhccc-ccEEEEecCCCC-
Q 024721 144 AAGFCWGGKVAVKLASN------------------Q------DVQAAVLLHPSN--VTEDEIKVVK-VPIAVLGAERDN- 195 (263)
Q Consensus 144 ~~G~S~Gg~~a~~~a~~------------------~------~i~~~v~~~~~~--~~~~~~~~~~-~p~l~i~G~~D~- 195 (263)
++|+|+|+-+.-...+. . .+.+.+...+.. ....++.++. .-+..|+|.+|+
T Consensus 330 liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~~g~~~~~~~~~~l~~~~v~CiYG~~e~d 409 (456)
T COG3946 330 LIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAGEGAGDVVPDIAKLPLARVQCIYGQEEKD 409 (456)
T ss_pred EEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCCcCCCCcchhhhhCCcceeEEEecCcccc
Confidence 99999999775543210 0 233444444333 2223444443 368888987754
Q ss_pred -CCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccccc
Q 024721 196 -GLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVR 232 (263)
Q Consensus 196 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~ 232 (263)
.+|.-.. ...+.+.+|| ||-|..+
T Consensus 410 ~~Cp~l~~------------~~~~~v~lpG-gHHFd~d 434 (456)
T COG3946 410 TACPSLKA------------KGVDTVKLPG-GHHFDGD 434 (456)
T ss_pred ccCCcchh------------hcceeEecCC-CcccCcc
Confidence 4442211 1477889997 6657543
No 147
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.40 E-value=1.2e-06 Score=75.35 Aligned_cols=109 Identities=14% Similarity=0.091 Sum_probs=69.4
Q ss_pred CCCeeEEEEeccc---CCCchhhHHHHHHHHhCC-CEEEeecCCCC-CCCCCCCCCcchhhhhh--cCCCccccccHHHH
Q 024721 58 HSKKAVLMISDIY---GDEPPIYRSVADKVAGAG-FLVVAPDFFHG-DAANPSNPKYDKDTWRK--NHTTDKGYEDAKPV 130 (263)
Q Consensus 58 ~~~~~vv~~h~~~---g~~~~~~~~~~~~l~~~G-~~vv~~d~~~g-~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~ 130 (263)
++.|++|++|||. |... ....-...|+++| ++||++|||=| -|+-.- ..+.+ .........|...+
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s-~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~------~~~~~~~~~~~n~Gl~DqilA 164 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGS-EPLYDGSALAARGDVVVVSVNYRLGALGFLDL------SSLDTEDAFASNLGLLDQILA 164 (491)
T ss_pred CCCcEEEEEeccccccCCCc-ccccChHHHHhcCCEEEEEeCcccccceeeeh------hhccccccccccccHHHHHHH
Confidence 4458899999873 3222 1122345688887 99999999833 222110 00000 00011345789999
Q ss_pred HHHHHhc------CCCeEEEEEEeccHHHHHHhhcCC----CccEEEEecCCC
Q 024721 131 IAALKEK------GVSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPSN 173 (263)
Q Consensus 131 ~~~l~~~------~~~~i~~~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~~ 173 (263)
++|++++ |++.|.++|.|.||+.++.+...| -++.+|+.+|..
T Consensus 165 LkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 165 LKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 9999886 788999999999999999976544 444555555554
No 148
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.37 E-value=3e-06 Score=67.43 Aligned_cols=100 Identities=24% Similarity=0.193 Sum_probs=60.4
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHH--------hCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHH
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVA--------GAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPV 130 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~--------~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 130 (263)
.+.+|||+||..|+.. .++.++..+. ...+.+++.|+. ....... .....+..+.+...
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~-~~~s~~~-----------g~~l~~q~~~~~~~ 69 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFN-EELSAFH-----------GRTLQRQAEFLAEA 69 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccC-ccccccc-----------cccHHHHHHHHHHH
Confidence 3578999999777653 4556665552 125888899983 2211100 01111222334444
Q ss_pred HHHHHhc------CCCeEEEEEEeccHHHHHHhhcC-----CCccEEEEecC
Q 024721 131 IAALKEK------GVSAVGAAGFCWGGKVAVKLASN-----QDVQAAVLLHP 171 (263)
Q Consensus 131 ~~~l~~~------~~~~i~~~G~S~Gg~~a~~~a~~-----~~i~~~v~~~~ 171 (263)
++.+.+. +.++|.++||||||.++-.+... ..++.++.+..
T Consensus 70 i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~t 121 (225)
T PF07819_consen 70 IKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGT 121 (225)
T ss_pred HHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcC
Confidence 4444322 56799999999999999886622 26888888763
No 149
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.36 E-value=5.9e-05 Score=63.71 Aligned_cols=166 Identities=13% Similarity=0.101 Sum_probs=99.7
Q ss_pred eEEEeC-CCC----CCeeEEEEecccC--CCchhhHHHHHHHHhC--CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC
Q 024721 50 KAYVTG-PPH----SKKAVLMISDIYG--DEPPIYRSVADKVAGA--GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 120 (263)
Q Consensus 50 ~~~~~~-~~~----~~~~vv~~h~~~g--~~~~~~~~~~~~l~~~--G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (263)
..|+.. |.. ++|.||++|||.= ...+....+...+... ...+++.||- -.+... ....+
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYs-Lt~~~~-----------~~~~y 174 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYS-LTSSDE-----------HGHKY 174 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEecc-cccccc-----------CCCcC
Confidence 355554 432 3467777776631 1112222222222211 5689999992 111000 11234
Q ss_pred ccccccHHHHHHHHH-hcCCCeEEEEEEeccHHHHHHhh---cC----CCccEEEEecCCCCC-----------------
Q 024721 121 DKGYEDAKPVIAALK-EKGVSAVGAAGFCWGGKVAVKLA---SN----QDVQAAVLLHPSNVT----------------- 175 (263)
Q Consensus 121 ~~~~~d~~~~~~~l~-~~~~~~i~~~G~S~Gg~~a~~~a---~~----~~i~~~v~~~~~~~~----------------- 175 (263)
.....++.+..++|. +.+.+.|.++|-|.||.+++.+. ++ +..+.+++++|+...
T Consensus 175 PtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~ 254 (374)
T PF10340_consen 175 PTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNEKR 254 (374)
T ss_pred chHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCccccccccc
Confidence 455678888888888 55788999999999999999865 22 367899999998511
Q ss_pred --------------------------------------hhhhhcc--cccEEEEecCCCCCCChHHHHHHHHHHHcCC--
Q 024721 176 --------------------------------------EDEIKVV--KVPIAVLGAERDNGLPPAQMKRFDEILYAKP-- 213 (263)
Q Consensus 176 --------------------------------------~~~~~~~--~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~-- 213 (263)
.+...++ ...+++++|+++-+ .++.+++.+.+....
T Consensus 255 D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evf--rddI~~~~~~~~~~~~~ 332 (374)
T PF10340_consen 255 DMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVF--RDDILEWAKKLNDVKPN 332 (374)
T ss_pred cccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCcccc--HHHHHHHHHHHhhcCcc
Confidence 0122222 34799999975543 356778888874322
Q ss_pred --CCceeEEEcCCCCccc
Q 024721 214 --KFDHLVKTYPGVCHGW 229 (263)
Q Consensus 214 --~~~~~~~~~~g~~H~~ 229 (263)
+...++.+-+++.|.-
T Consensus 333 ~~~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 333 KFSNSNNVYIDEGGIHIG 350 (374)
T ss_pred ccCCcceEEEecCCcccc
Confidence 1245777788888854
No 150
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.35 E-value=2.3e-05 Score=60.59 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=67.2
Q ss_pred eeEEEEecccCCC---chhhHHHHHHHHhCCCEEEeecCCC-CCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 61 KAVLMISDIYGDE---PPIYRSVADKVAGAGFLVVAPDFFH-GDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 61 ~~vv~~h~~~g~~---~~~~~~~~~~l~~~G~~vv~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
...|++-||.|.. .++...++.+|-+.+|..+-+.++. -.|+ ...+..+-.+|+..+++.+..
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~-------------Gt~slk~D~edl~~l~~Hi~~ 102 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGY-------------GTFSLKDDVEDLKCLLEHIQL 102 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccc-------------ccccccccHHHHHHHHHHhhc
Confidence 3455566666643 3466788999999999999998851 1111 123445666889999997765
Q ss_pred cC-CCeEEEEEEeccHHHHHHhhc----CCCccEEEEecCC
Q 024721 137 KG-VSAVGAAGFCWGGKVAVKLAS----NQDVQAAVLLHPS 172 (263)
Q Consensus 137 ~~-~~~i~~~G~S~Gg~~a~~~a~----~~~i~~~v~~~~~ 172 (263)
.+ ...|+++|||.|..-.+.+.. ...+++.|+-.|.
T Consensus 103 ~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 103 CGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred cCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 43 348999999999988887652 2356666665554
No 151
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.34 E-value=9.5e-06 Score=71.98 Aligned_cols=165 Identities=16% Similarity=0.121 Sum_probs=110.0
Q ss_pred CCCeeEEEEecccCCCc-hhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhc---CCCccccccHHHHHHH
Q 024721 58 HSKKAVLMISDIYGDEP-PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKN---HTTDKGYEDAKPVIAA 133 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~~-~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~ 133 (263)
++.|.+|...|..|.+. +.+....-.|..+||+-...--|+|.-.. ..|.+. ....+-..|+.++.++
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG--------~~WYe~GK~l~K~NTf~DFIa~a~~ 517 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELG--------RAWYEDGKLLNKKNTFTDFIAAARH 517 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccC--------hHHHHhhhhhhccccHHHHHHHHHH
Confidence 45577888888888543 35555555788899877777666443111 112221 2235566899999999
Q ss_pred HHhc---CCCeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCCC------------------------hh-------
Q 024721 134 LKEK---GVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNVT------------------------ED------- 177 (263)
Q Consensus 134 l~~~---~~~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~~------------------------~~------- 177 (263)
|.++ ..++|+++|-|.||+++..+++. | .++++++-.|.... .+
T Consensus 518 Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yikS 597 (682)
T COG1770 518 LVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKS 597 (682)
T ss_pred HHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHHhh
Confidence 9887 46699999999999999998844 3 78888887765411 00
Q ss_pred --hhhcc----cccEEEEecCCCCCCChHHHHHHHHHHHcCC--CCceeEEEcCCCCcccc
Q 024721 178 --EIKVV----KVPIAVLGAERDNGLPPAQMKRFDEILYAKP--KFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 178 --~~~~~----~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~g~~H~~~ 230 (263)
.+.++ =.|+|++.|.+|+-|..=...+|..+|+... +.+.-+..-=.+||+=.
T Consensus 598 YSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~ 658 (682)
T COG1770 598 YSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGA 658 (682)
T ss_pred cCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCC
Confidence 11222 2589999999999998766677877775322 22455666345899653
No 152
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.33 E-value=6e-05 Score=61.15 Aligned_cols=187 Identities=14% Similarity=0.190 Sum_probs=106.2
Q ss_pred eCCeeEEEeCCCC-CCeeEEEEecccCCCchhhHHH-----HHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCC
Q 024721 46 LGGLKAYVTGPPH-SKKAVLMISDIYGDEPPIYRSV-----ADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 119 (263)
Q Consensus 46 ~~~~~~~~~~~~~-~~~~vv~~h~~~g~~~~~~~~~-----~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~ 119 (263)
.+.+.+++.+..+ .+|++|-+|...-.....+..+ ++.+.+ .|.++=+|.+ |+.......+.+ +.-.+
T Consensus 8 ~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aP-Gqe~ga~~~p~~----y~yPs 81 (283)
T PF03096_consen 8 YGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAP-GQEEGAATLPEG----YQYPS 81 (283)
T ss_dssp TEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-T-TTSTT-----TT---------
T ss_pred ceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCC-CCCCCccccccc----ccccC
Confidence 3447788876554 4566777776532222213332 445554 5999999984 432211111111 11234
Q ss_pred CccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCCC----------------------
Q 024721 120 TDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNVT---------------------- 175 (263)
Q Consensus 120 ~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~~---------------------- 175 (263)
++++.+++..+++++ +.+.+..+|.-.|+.+-.++| .+| ++.++|++++....
T Consensus 82 md~LAe~l~~Vl~~f---~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt 158 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHF---GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMT 158 (283)
T ss_dssp HHHHHCTHHHHHHHH---T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTT
T ss_pred HHHHHHHHHHHHHhC---CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccccc
Confidence 578888898888888 667899999999999999988 444 99999998866411
Q ss_pred -----------------------------------------------------hhhhhcccccEEEEecCCCCCCChHHH
Q 024721 176 -----------------------------------------------------EDEIKVVKVPIAVLGAERDNGLPPAQM 202 (263)
Q Consensus 176 -----------------------------------------------------~~~~~~~~~p~l~i~G~~D~~~~~~~~ 202 (263)
....+...||+|++.|++-+.. +.+
T Consensus 159 ~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~v 236 (283)
T PF03096_consen 159 SSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--DDV 236 (283)
T ss_dssp S-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--HHH
T ss_pred cchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--hhH
Confidence 0123445699999999888754 566
Q ss_pred HHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 203 KRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 203 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
.++..+|. .....+...+++|=.... +....+.+.+.-||+
T Consensus 237 v~~ns~Ld---p~~ttllkv~dcGglV~e----------EqP~klaea~~lFlQ 277 (283)
T PF03096_consen 237 VEMNSKLD---PTKTTLLKVADCGGLVLE----------EQPGKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHS----CCCEEEEEETT-TT-HHH----------H-HHHHHHHHHHHHH
T ss_pred HHHHhhcC---cccceEEEecccCCcccc----------cCcHHHHHHHHHHHc
Confidence 78888883 236888888888664432 334455555555554
No 153
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.32 E-value=1.8e-06 Score=77.13 Aligned_cols=114 Identities=18% Similarity=0.177 Sum_probs=71.9
Q ss_pred eeEEEeCCC-----CCCeeEEEEeccc---CCCchhhHHHHHHHHhC-C-CEEEeecCCCCC-CCCCCCCCcchhhhhhc
Q 024721 49 LKAYVTGPP-----HSKKAVLMISDIY---GDEPPIYRSVADKVAGA-G-FLVVAPDFFHGD-AANPSNPKYDKDTWRKN 117 (263)
Q Consensus 49 ~~~~~~~~~-----~~~~~vv~~h~~~---g~~~~~~~~~~~~l~~~-G-~~vv~~d~~~g~-~~~~~~~~~~~~~~~~~ 117 (263)
+..-++.|. ++.|.+|++|||. |... .+ ....|+.. + +.|++++||-|. +.-..... .
T Consensus 79 l~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~-~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~--------~ 147 (493)
T cd00312 79 LYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGS-LY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI--------E 147 (493)
T ss_pred CeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCC-CC--ChHHHHhcCCCEEEEEecccccccccccCCCC--------C
Confidence 555555553 2347788999873 3221 11 23445544 3 999999997332 22111000 0
Q ss_pred CCCccccccHHHHHHHHHhc------CCCeEEEEEEeccHHHHHHhhcC----CCccEEEEecCCC
Q 024721 118 HTTDKGYEDAKPVIAALKEK------GVSAVGAAGFCWGGKVAVKLASN----QDVQAAVLLHPSN 173 (263)
Q Consensus 118 ~~~~~~~~d~~~~~~~l~~~------~~~~i~~~G~S~Gg~~a~~~a~~----~~i~~~v~~~~~~ 173 (263)
........|...+++|+++. ++++|.++|+|.||.++..++.. +.++++|+.+|..
T Consensus 148 ~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 148 LPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 11122357999999999875 67899999999999999987743 3577777777643
No 154
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.32 E-value=3.2e-06 Score=76.06 Aligned_cols=105 Identities=16% Similarity=0.063 Sum_probs=64.2
Q ss_pred CeeEEEEeccc---CCCchhhHHHHHHHHhCCCEEEeecCCCCC-CC--CCCCCCcchhhhhhcCCCccccccHHHHHHH
Q 024721 60 KKAVLMISDIY---GDEPPIYRSVADKVAGAGFLVVAPDFFHGD-AA--NPSNPKYDKDTWRKNHTTDKGYEDAKPVIAA 133 (263)
Q Consensus 60 ~~~vv~~h~~~---g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~-~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 133 (263)
.|++|++|||. |............+++++++||+++||=|. |. ....... .--....|...+++|
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~---------~gN~Gl~Dq~~AL~W 195 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP---------SGNYGLLDQRLALKW 195 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH---------BSTHHHHHHHHHHHH
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC---------chhhhhhhhHHHHHH
Confidence 37788899763 222112334455667789999999997321 11 0000000 011234699999999
Q ss_pred HHhc------CCCeEEEEEEeccHHHHHHhh----cCCCccEEEEecCCC
Q 024721 134 LKEK------GVSAVGAAGFCWGGKVAVKLA----SNQDVQAAVLLHPSN 173 (263)
Q Consensus 134 l~~~------~~~~i~~~G~S~Gg~~a~~~a----~~~~i~~~v~~~~~~ 173 (263)
+++. |+++|.++|+|.||..+..+. ..+-++.+|+.+|..
T Consensus 196 V~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 196 VQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred HHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 9986 688999999999999999865 234799999998854
No 155
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.21 E-value=0.00012 Score=57.78 Aligned_cols=183 Identities=14% Similarity=0.123 Sum_probs=108.7
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCC-----CEEEeecCCCCC----CCCCCCCCcch---hhhhhcCCCccccccHH
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAG-----FLVVAPDFFHGD----AANPSNPKYDK---DTWRKNHTTDKGYEDAK 128 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G-----~~vv~~d~~~g~----~~~~~~~~~~~---~~~~~~~~~~~~~~d~~ 128 (263)
-|.|++||..|.. ..+..+++.|.+.+ --++.+|- .|. |.-..+..... .--.++.+..+...=+.
T Consensus 46 iPTIfIhGsgG~a-sS~~~Mv~ql~~~~~~~~e~Lt~~V~~-dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 46 IPTIFIHGSGGTA-SSLNGMVNQLLPDYKAGTESLTMTVDV-DGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred cceEEEecCCCCh-hHHHHHHHHhhhcccccccceEEEEcC-CCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 3689999877764 56788888888764 34555555 332 10001100000 00011122233344578
Q ss_pred HHHHHHHhc-CCCeEEEEEEeccHHHHHHhh-------cCCCccEEEEecCCCCC-------------------------
Q 024721 129 PVIAALKEK-GVSAVGAAGFCWGGKVAVKLA-------SNQDVQAAVLLHPSNVT------------------------- 175 (263)
Q Consensus 129 ~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a-------~~~~i~~~v~~~~~~~~------------------------- 175 (263)
.++.+|.++ +...+=++||||||.....++ +-|.++..|++.+.+..
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y~ 203 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPYY 203 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHHH
Confidence 888888887 778999999999999888866 22578888887765430
Q ss_pred ---hhhhhcc--cccEEEEecCCCCC------CChHHHHHHHHHHHcCCCCceeEEEcCC--CCccccccCCCCChhhhh
Q 024721 176 ---EDEIKVV--KVPIAVLGAERDNG------LPPAQMKRFDEILYAKPKFDHLVKTYPG--VCHGWTVRYFVNDTFAVN 242 (263)
Q Consensus 176 ---~~~~~~~--~~p~l~i~G~~D~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~~~~~~~~~~~~~~~ 242 (263)
......+ ..-+|+|.|+-|+- +|...+...+..+.. ++.......|+| +.|.-..+
T Consensus 204 ~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~-~~ksy~e~~~~Gk~a~Hs~lhe---------- 272 (288)
T COG4814 204 DYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKK-NGKSYIESLYKGKDARHSKLHE---------- 272 (288)
T ss_pred HHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhcc-CcceeEEEeeeCCcchhhccCC----------
Confidence 0011112 34699999987653 666777777777743 333444445554 45654332
Q ss_pred HHHHHHHHHHHHHHH
Q 024721 243 SAAEAHEDMINWFEK 257 (263)
Q Consensus 243 ~~~~~~~~~~~fl~~ 257 (263)
...+.+.+.+||.+
T Consensus 273 -n~~v~~yv~~FLw~ 286 (288)
T COG4814 273 -NPTVAKYVKNFLWE 286 (288)
T ss_pred -ChhHHHHHHHHhhc
Confidence 24677778888764
No 156
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.14 E-value=5.8e-05 Score=60.46 Aligned_cols=131 Identities=13% Similarity=0.176 Sum_probs=80.7
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhCCC--EEEeecCCC-CCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHH
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGAGF--LVVAPDFFH-GDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 135 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~--~vv~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 135 (263)
.+..+|++||............++.....+| .++.+.|+. |....+.. ....-.....++..+++.|.
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~---------d~~~a~~s~~~l~~~L~~L~ 87 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY---------DRESARFSGPALARFLRDLA 87 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhh---------hhhhHHHHHHHHHHHHHHHH
Confidence 4567888887655433333444443333344 788888852 32111110 00011122356667777776
Q ss_pred hc-CCCeEEEEEEeccHHHHHHhhc-----C------CCccEEEEecCCCCCh------hhhhcccccEEEEecCCCCCC
Q 024721 136 EK-GVSAVGAAGFCWGGKVAVKLAS-----N------QDVQAAVLLHPSNVTE------DEIKVVKVPIAVLGAERDNGL 197 (263)
Q Consensus 136 ~~-~~~~i~~~G~S~Gg~~a~~~a~-----~------~~i~~~v~~~~~~~~~------~~~~~~~~p~l~i~G~~D~~~ 197 (263)
+. +..+|.+++||||+.+.+.+.+ . .++..+++..|..... ..+.+...++.+.+..+|...
T Consensus 88 ~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~~D~AL 167 (233)
T PF05990_consen 88 RAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSRNDRAL 167 (233)
T ss_pred hccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcCCchHH
Confidence 66 6789999999999999998641 1 1677888888876542 123445679999999999865
Q ss_pred C
Q 024721 198 P 198 (263)
Q Consensus 198 ~ 198 (263)
.
T Consensus 168 ~ 168 (233)
T PF05990_consen 168 K 168 (233)
T ss_pred H
Confidence 4
No 157
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.11 E-value=7.9e-05 Score=61.55 Aligned_cols=96 Identities=11% Similarity=0.155 Sum_probs=65.9
Q ss_pred hCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc----CCCeEEEEEEeccHHHHHHhhcCC
Q 024721 86 GAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK----GVSAVGAAGFCWGGKVAVKLASNQ 161 (263)
Q Consensus 86 ~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~----~~~~i~~~G~S~Gg~~a~~~a~~~ 161 (263)
+.|-+|++++|| |-+.+.+. .+.+++..|..++++|++++ ++++|.+.|||+||.++..+.++.
T Consensus 169 ~~~aNvl~fNYp-GVg~S~G~-----------~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 169 ELGANVLVFNYP-GVGSSTGP-----------PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HcCCcEEEECCC-ccccCCCC-----------CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 358999999995 44332221 12356788999999999864 357999999999999988865432
Q ss_pred ------CccEEEEecCCC--------------------------CChhhhhcccccEEEEecCC
Q 024721 162 ------DVQAAVLLHPSN--------------------------VTEDEIKVVKVPIAVLGAER 193 (263)
Q Consensus 162 ------~i~~~v~~~~~~--------------------------~~~~~~~~~~~p~l~i~G~~ 193 (263)
.++-++.-.-.+ .+....++++||-+++++.+
T Consensus 237 ~~~~~dgi~~~~ikDRsfssl~~vas~~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 237 VLKGSDGIRWFLIKDRSFSSLAAVASQFFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred ccccCCCeeEEEEecCCcchHHHHHHHHHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 344444332222 12345677899999999864
No 158
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.08 E-value=4.9e-06 Score=69.94 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=62.2
Q ss_pred CCeeEEEEecccCCC--chhhHHHHHHHHhC---CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHH
Q 024721 59 SKKAVLMISDIYGDE--PPIYRSVADKVAGA---GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAA 133 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~--~~~~~~~~~~l~~~---G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 133 (263)
.+|.+|++||+.+.. ..+...+.+.+.++ .+.|+++|+..+.... .. . ...........+..+++.
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-----Y~--~--a~~n~~~vg~~la~~l~~ 140 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-----YP--Q--AVANTRLVGRQLAKFLSF 140 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS------HH--H--HHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-----cc--c--hhhhHHHHHHHHHHHHHH
Confidence 457788999887754 35667777765554 7999999993221100 00 0 000011222345555666
Q ss_pred HHhc---CCCeEEEEEEeccHHHHHHhhcC--C--CccEEEEecCCCC
Q 024721 134 LKEK---GVSAVGAAGFCWGGKVAVKLASN--Q--DVQAAVLLHPSNV 174 (263)
Q Consensus 134 l~~~---~~~~i~~~G~S~Gg~~a~~~a~~--~--~i~~~v~~~~~~~ 174 (263)
|.+. +.++|.++|||+||.++-.+++. . ++..+..+.|...
T Consensus 141 L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 141 LINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 6532 57799999999999999998832 3 7999999988753
No 159
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.08 E-value=0.00026 Score=56.79 Aligned_cols=92 Identities=15% Similarity=0.125 Sum_probs=55.7
Q ss_pred CCCeEEEEEEeccHHHHHHhh-cC-CCccEEEEecCCCCChh--------hhhcc-cccEEEEec--CCCC---CCCh--
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA-SN-QDVQAAVLLHPSNVTED--------EIKVV-KVPIAVLGA--ERDN---GLPP-- 199 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a-~~-~~i~~~v~~~~~~~~~~--------~~~~~-~~p~l~i~G--~~D~---~~~~-- 199 (263)
+.++.+++|||+||.+++.+. .. ..+....+++|+..-.+ ..... +.++++..| +.|. ....
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~~~~~~i~l~iG~~e~~~~~~~~~~~~ 214 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAILREIESLKLLKTKRICLYIGSGELDSSRSIRMAEN 214 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHhccccccccCCCcceEEEecccccCcchhhhhhhH
Confidence 567899999999999999955 55 48888888898763211 01111 334444444 3333 2222
Q ss_pred -HHHHHHHHHHHcCCCCceeEEEcCCCCccc
Q 024721 200 -AQMKRFDEILYAKPKFDHLVKTYPGVCHGW 229 (263)
Q Consensus 200 -~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 229 (263)
...++..+.+....+....+..+++.+|+-
T Consensus 215 ~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~ 245 (264)
T COG2819 215 KQEAAELSSLLEKRTGARLVFQEEPLEHHGS 245 (264)
T ss_pred HHHHHHHHHHHhhccCCceEecccccccccc
Confidence 223333444433366677788888878855
No 160
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.08 E-value=9.8e-05 Score=59.99 Aligned_cols=88 Identities=18% Similarity=0.165 Sum_probs=58.2
Q ss_pred CCCeEEEEEEeccHHHHHHhhc-CC-CccEEEEecCCCCCh----------------hhhhcc-cccEEEEecCCCCCCC
Q 024721 138 GVSAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLHPSNVTE----------------DEIKVV-KVPIAVLGAERDNGLP 198 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~~~~~~~----------------~~~~~~-~~p~l~i~G~~D~~~~ 198 (263)
...+-+++|.|+||.+++.++. .| .+-.+++.+|..... ..+... ..-++...++.+.+.+
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~l~~g~~~~~~~~ 254 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAESLKILHAIGTDERIVLTTGGEEGDFLR 254 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhhhhhhhhccCccceEEeecCCccccccc
Confidence 4557899999999999999884 44 777777777765321 011111 1223333344444444
Q ss_pred hHHHHHHHHHHHcCCCCceeEEEcCCCCccc
Q 024721 199 PAQMKRFDEILYAKPKFDHLVKTYPGVCHGW 229 (263)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 229 (263)
..+++++.| ...+.+..+..|+| ||.+
T Consensus 255 --pNr~L~~~L-~~~g~~~~yre~~G-gHdw 281 (299)
T COG2382 255 --PNRALAAQL-EKKGIPYYYREYPG-GHDW 281 (299)
T ss_pred --hhHHHHHHH-HhcCCcceeeecCC-CCch
Confidence 466788888 55777999999998 9977
No 161
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.07 E-value=4.5e-05 Score=75.87 Aligned_cols=168 Identities=11% Similarity=0.038 Sum_probs=100.1
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKG 138 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 138 (263)
.+++++++|++.|.. ..|..+++.|.. ++.|+.++.+ |.+.... ...+.+...+++...++.+. .
T Consensus 1067 ~~~~l~~lh~~~g~~-~~~~~l~~~l~~-~~~v~~~~~~-g~~~~~~----------~~~~l~~la~~~~~~i~~~~--~ 1131 (1296)
T PRK10252 1067 DGPTLFCFHPASGFA-WQFSVLSRYLDP-QWSIYGIQSP-RPDGPMQ----------TATSLDEVCEAHLATLLEQQ--P 1131 (1296)
T ss_pred CCCCeEEecCCCCch-HHHHHHHHhcCC-CCcEEEEECC-CCCCCCC----------CCCCHHHHHHHHHHHHHhhC--C
Confidence 346799999888765 577888888854 6999999984 3321100 01222334444444443321 2
Q ss_pred CCeEEEEEEeccHHHHHHhhc----C-CCccEEEEecCCCCC--------------------------------------
Q 024721 139 VSAVGAAGFCWGGKVAVKLAS----N-QDVQAAVLLHPSNVT-------------------------------------- 175 (263)
Q Consensus 139 ~~~i~~~G~S~Gg~~a~~~a~----~-~~i~~~v~~~~~~~~-------------------------------------- 175 (263)
..++.++|||+||.+++.+|. . .++..++++.+....
T Consensus 1132 ~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1211 (1296)
T PRK10252 1132 HGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTE 1211 (1296)
T ss_pred CCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHH
Confidence 348999999999999999884 2 366666665431100
Q ss_pred ---------h--------hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCCh
Q 024721 176 ---------E--------DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDT 238 (263)
Q Consensus 176 ---------~--------~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~ 238 (263)
. .....+.+|++++.++.|..........|.+.. ...++..+++ +|.....
T Consensus 1212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-----~~~~~~~v~g-~H~~~~~------ 1279 (1296)
T PRK10252 1212 LFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-----AELDVYRQDC-AHVDIIS------ 1279 (1296)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-----CCCEEEECCC-CHHHHCC------
Confidence 0 001234578889999888655444444443332 1567778874 8976442
Q ss_pred hhhhHHHHHHHHHHHHHHHHh
Q 024721 239 FAVNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 239 ~~~~~~~~~~~~~~~fl~~~l 259 (263)
......+.++|.+.+
T Consensus 1280 ------~~~~~~~~~~l~~~l 1294 (1296)
T PRK10252 1280 ------PEAFEKIGPILRATL 1294 (1296)
T ss_pred ------cHHHHHHHHHHHHHh
Confidence 123455666666554
No 162
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.05 E-value=4.4e-05 Score=66.56 Aligned_cols=88 Identities=10% Similarity=0.134 Sum_probs=61.9
Q ss_pred chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-CCCeEEEEEEeccHH
Q 024721 74 PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-GVSAVGAAGFCWGGK 152 (263)
Q Consensus 74 ~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~ 152 (263)
..+|..+.+.|.+.||.+ ..|+ .|.+++.... ...++..+++...++.+.+. +.+++.++||||||.
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL-~g~gYDwR~~----------~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGl 174 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTL-FGFGYDFRQS----------NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGL 174 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCc-ccCCCCcccc----------ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHH
Confidence 357889999999999866 6787 4544433211 11234457788888877654 567999999999999
Q ss_pred HHHHhhc-CC-----CccEEEEecCCC
Q 024721 153 VAVKLAS-NQ-----DVQAAVLLHPSN 173 (263)
Q Consensus 153 ~a~~~a~-~~-----~i~~~v~~~~~~ 173 (263)
++..++. .+ .|+.+|++++..
T Consensus 175 va~~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 175 LVKCFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHHHHCCHhHHhHhccEEEECCCC
Confidence 9998663 22 478888876543
No 163
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.03 E-value=0.00051 Score=55.51 Aligned_cols=119 Identities=18% Similarity=0.207 Sum_probs=74.8
Q ss_pred eCCeeEEEeCCC-CCCeeEEEEecccCCCchhhHHH-----HHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCC
Q 024721 46 LGGLKAYVTGPP-HSKKAVLMISDIYGDEPPIYRSV-----ADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 119 (263)
Q Consensus 46 ~~~~~~~~~~~~-~~~~~vv~~h~~~g~~~~~~~~~-----~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~ 119 (263)
.+.+.+.+.+.+ +.+|++|-+|...-.....+..+ +..+.++ |.++-+|.+ |.-......+.+ +.-.+
T Consensus 31 ~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~P-Gqe~gAp~~p~~----y~yPs 104 (326)
T KOG2931|consen 31 HGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAP-GQEDGAPSFPEG----YPYPS 104 (326)
T ss_pred cccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCC-ccccCCccCCCC----CCCCC
Confidence 355888888754 34566555554432222223332 4556666 999999984 432111110001 11123
Q ss_pred CccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCC
Q 024721 120 TDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSN 173 (263)
Q Consensus 120 ~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~ 173 (263)
++++.+++..+++++ +.+.|..+|.-.|+.+-.+.| .+| ++.++|+++...
T Consensus 105 md~LAd~l~~VL~~f---~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 105 MDDLADMLPEVLDHF---GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDP 157 (326)
T ss_pred HHHHHHHHHHHHHhc---CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCC
Confidence 467777888888877 667899999999999999988 454 999999987543
No 164
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.02 E-value=9.7e-05 Score=60.81 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=55.5
Q ss_pred hhhccc-ccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 178 EIKVVK-VPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 178 ~~~~~~-~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
.+..+. +|+|+++|++|..+|....+.+++..+.+ +.+...+++++|....... ...++.+..+.+||.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~-------~~~~~~~~~~~~f~~ 295 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER---PKKLLFVPGGGHIDLYDNP-------PAVEQALDKLAEFLE 295 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC---CceEEEecCCccccccCcc-------HHHHHHHHHHHHHHH
Confidence 344555 79999999999999999999888887432 5678888888997754221 224589999999999
Q ss_pred HHh
Q 024721 257 KHV 259 (263)
Q Consensus 257 ~~l 259 (263)
+++
T Consensus 296 ~~l 298 (299)
T COG1073 296 RHL 298 (299)
T ss_pred Hhc
Confidence 876
No 165
>COG3150 Predicted esterase [General function prediction only]
Probab=98.00 E-value=0.00015 Score=53.62 Aligned_cols=111 Identities=15% Similarity=0.111 Sum_probs=66.1
Q ss_pred cccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcCCCccEEEEecCCCCC--------------------------
Q 024721 122 KGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSNVT-------------------------- 175 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~~~-------------------------- 175 (263)
...+.+..++... +...+.++|.|.||+.+-+++..-.+++++. +|...+
T Consensus 44 ~a~~ele~~i~~~---~~~~p~ivGssLGGY~At~l~~~~Girav~~-NPav~P~e~l~gylg~~en~ytg~~y~le~~h 119 (191)
T COG3150 44 QALKELEKAVQEL---GDESPLIVGSSLGGYYATWLGFLCGIRAVVF-NPAVRPYELLTGYLGRPENPYTGQEYVLESRH 119 (191)
T ss_pred HHHHHHHHHHHHc---CCCCceEEeecchHHHHHHHHHHhCChhhhc-CCCcCchhhhhhhcCCCCCCCCcceEEeehhh
Confidence 3444455444443 4445999999999999999997777776653 333211
Q ss_pred -----hhhhhcccc-cEEEEecCC-CCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHH
Q 024721 176 -----EDEIKVVKV-PIAVLGAER-DNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAH 248 (263)
Q Consensus 176 -----~~~~~~~~~-p~l~i~G~~-D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~ 248 (263)
...+..++. ..+.+.... |++...... .+.+. .+...+++|..|.|.. -+...
T Consensus 120 I~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a---~a~y~-----~~~~~V~dgg~H~F~~------------f~~~l 179 (191)
T COG3150 120 IATLCVLQFRELNRPRCLVLLSQTGDEVLDYRQA---VAYYH-----PCYEIVWDGGDHKFKG------------FSRHL 179 (191)
T ss_pred HHHHHHhhccccCCCcEEEeecccccHHHHHHHH---HHHhh-----hhhheeecCCCccccc------------hHHhH
Confidence 112233333 344444444 887754433 33332 3456777889999953 34566
Q ss_pred HHHHHHHH
Q 024721 249 EDMINWFE 256 (263)
Q Consensus 249 ~~~~~fl~ 256 (263)
+.|..|..
T Consensus 180 ~~i~aF~g 187 (191)
T COG3150 180 QRIKAFKG 187 (191)
T ss_pred HHHHHHhc
Confidence 67777753
No 166
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.00 E-value=0.00015 Score=62.97 Aligned_cols=53 Identities=23% Similarity=0.235 Sum_probs=39.9
Q ss_pred hhhcccccEEEEecCCCCCCChHHHHHHHHHHH------cCCCCceeEEEcCCCCcccc
Q 024721 178 EIKVVKVPIAVLGAERDNGLPPAQMKRFDEILY------AKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 178 ~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~g~~H~~~ 230 (263)
++++|++|+++++|..|.+.|++++..|.-.+. ...|-.+-+.+.+..||-=.
T Consensus 292 DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGI 350 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGI 350 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEE
Confidence 588999999999999999999998865544432 23343566778888899543
No 167
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.99 E-value=0.0018 Score=55.18 Aligned_cols=38 Identities=18% Similarity=0.236 Sum_probs=31.3
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEc
Q 024721 184 VPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTY 222 (263)
Q Consensus 184 ~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 222 (263)
+-....|+..|+..|.+.=+++++.+ .+-|-+++++.+
T Consensus 294 ~~yvsYHs~~D~~~p~~~K~~l~~~l-~~lgfda~l~lI 331 (403)
T PF11144_consen 294 IIYVSYHSIKDDLAPAEDKEELYEIL-KNLGFDATLHLI 331 (403)
T ss_pred eEEEEEeccCCCCCCHHHHHHHHHHH-HHcCCCeEEEEe
Confidence 34567789999999999999999999 556778888877
No 168
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.97 E-value=2.6e-05 Score=68.94 Aligned_cols=116 Identities=19% Similarity=0.163 Sum_probs=74.4
Q ss_pred CC--eeEEEeCCC--CCCeeEEEEeccc-C-C--CchhhHHHHH---HHHhCCCEEEeecCCCCCCCCCCCCCcchhhhh
Q 024721 47 GG--LKAYVTGPP--HSKKAVLMISDIY-G-D--EPPIYRSVAD---KVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWR 115 (263)
Q Consensus 47 ~~--~~~~~~~~~--~~~~~vv~~h~~~-g-~--~~~~~~~~~~---~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~ 115 (263)
+| +..-++.|+ ++.|.++....+. . . .......... .++.+||+||..|.| |++.+.+..
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvR-G~~~SeG~~-------- 98 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVR-GRGGSEGVF-------- 98 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccc-ccccCCccc--------
Confidence 55 444455676 4445566555221 1 1 0112233344 688899999999995 443332211
Q ss_pred hcCCCccccccHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhh--cCCCccEEEEecCC
Q 024721 116 KNHTTDKGYEDAKPVIAALKEK--GVSAVGAAGFCWGGKVAVKLA--SNQDVQAAVLLHPS 172 (263)
Q Consensus 116 ~~~~~~~~~~d~~~~~~~l~~~--~~~~i~~~G~S~Gg~~a~~~a--~~~~i~~~v~~~~~ 172 (263)
.... .+..+|-..+|+|+.++ ...+|+++|.|++|...+.+| .+|.+++++...+.
T Consensus 99 ~~~~-~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~ 158 (563)
T COG2936 99 DPES-SREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGL 158 (563)
T ss_pred ceec-cccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccc
Confidence 1111 14668999999999988 456999999999999999977 44688888885543
No 169
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.94 E-value=0.00077 Score=53.51 Aligned_cols=160 Identities=20% Similarity=0.256 Sum_probs=89.4
Q ss_pred EEeCCCCCCeeEEEEecc-c-CCC-chhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHH
Q 024721 52 YVTGPPHSKKAVLMISDI-Y-GDE-PPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAK 128 (263)
Q Consensus 52 ~~~~~~~~~~~vv~~h~~-~-g~~-~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 128 (263)
|+..|+.+. +||-|-|| + |.. .-.|+.+.+.|+++||.|++.=|..+- ..+... .+..+...
T Consensus 9 wvl~P~~P~-gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tf-----------DH~~~A---~~~~~~f~ 73 (250)
T PF07082_consen 9 WVLIPPRPK-GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTF-----------DHQAIA---REVWERFE 73 (250)
T ss_pred EEEeCCCCC-EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCC-----------cHHHHH---HHHHHHHH
Confidence 445555443 56655554 3 322 237899999999999999988773221 000000 11123344
Q ss_pred HHHHHHHhcC-----CCeEEEEEEeccHHHHHHhhcCC--Ccc--EEEEecCCCC--------------------Chhh-
Q 024721 129 PVIAALKEKG-----VSAVGAAGFCWGGKVAVKLASNQ--DVQ--AAVLLHPSNV--------------------TEDE- 178 (263)
Q Consensus 129 ~~~~~l~~~~-----~~~i~~~G~S~Gg~~a~~~a~~~--~i~--~~v~~~~~~~--------------------~~~~- 178 (263)
.+++.+.+.. .-+++-+|||+|+-+-+.+.... .-+ .++++.-... ++.+
T Consensus 74 ~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET 153 (250)
T PF07082_consen 74 RCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPSPEET 153 (250)
T ss_pred HHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHhhhccccccCccCCHHHH
Confidence 5555555431 12788899999999999876321 223 3333331110 0110
Q ss_pred ---h--hcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 179 ---I--KVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 179 ---~--~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
+ .......|++-=.+|.+ ++...+.+.|+.+...-.+....+| .|...
T Consensus 154 ~~li~~~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTP 206 (250)
T PF07082_consen 154 RRLIRESYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTP 206 (250)
T ss_pred HHHHHHhcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCc
Confidence 0 01123467777777765 3555666777554444577888986 99664
No 170
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.81 E-value=4.4e-05 Score=62.79 Aligned_cols=125 Identities=21% Similarity=0.159 Sum_probs=79.6
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc---
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK--- 137 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--- 137 (263)
..||++-|-.|.. --.++..-++.||.|+-++++ |-..+.+.+ -+.+..+.+.+++++.-+.
T Consensus 244 ~LvIC~EGNAGFY---EvG~m~tP~~lgYsvLGwNhP-GFagSTG~P-----------~p~n~~nA~DaVvQfAI~~Lgf 308 (517)
T KOG1553|consen 244 DLVICFEGNAGFY---EVGVMNTPAQLGYSVLGWNHP-GFAGSTGLP-----------YPVNTLNAADAVVQFAIQVLGF 308 (517)
T ss_pred eEEEEecCCccce---EeeeecChHHhCceeeccCCC-CccccCCCC-----------CcccchHHHHHHHHHHHHHcCC
Confidence 3455554444432 134555667789999999994 322111110 0112224455666654433
Q ss_pred CCCeEEEEEEeccHHHHHHhhc-CCCccEEEEecCCCC----------------------------ChhhhhcccccEEE
Q 024721 138 GVSAVGAAGFCWGGKVAVKLAS-NQDVQAAVLLHPSNV----------------------------TEDEIKVVKVPIAV 188 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a~-~~~i~~~v~~~~~~~----------------------------~~~~~~~~~~p~l~ 188 (263)
..+.|++.|||-||..+.++|+ .|.++++|+-..... ..+.+.+.+.|+.+
T Consensus 309 ~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~l 388 (517)
T KOG1553|consen 309 RQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRL 388 (517)
T ss_pred CccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhhhchHHHHHHHHHHHHHhcccchHHHHHhhcCchhH
Confidence 4668999999999999999884 579999998443220 12345667899999
Q ss_pred EecCCCCCCChH
Q 024721 189 LGAERDNGLPPA 200 (263)
Q Consensus 189 i~G~~D~~~~~~ 200 (263)
|.-++|+++...
T Consensus 389 IRRt~dEIitt~ 400 (517)
T KOG1553|consen 389 IRRTQDEIITTA 400 (517)
T ss_pred hhhhhHhhhhcc
Confidence 999999987544
No 171
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.74 E-value=0.00023 Score=57.43 Aligned_cols=97 Identities=19% Similarity=0.178 Sum_probs=64.4
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-CC
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-GV 139 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~ 139 (263)
|++.+||+..|.- ..|..++.+|... ..|+..+.+ |.+.. . .......+.+...++.+++. +.
T Consensus 1 ~pLF~fhp~~G~~-~~~~~L~~~l~~~-~~v~~l~a~-g~~~~-~------------~~~~~l~~~a~~yv~~Ir~~QP~ 64 (257)
T COG3319 1 PPLFCFHPAGGSV-LAYAPLAAALGPL-LPVYGLQAP-GYGAG-E------------QPFASLDDMAAAYVAAIRRVQPE 64 (257)
T ss_pred CCEEEEcCCCCcH-HHHHHHHHHhccC-ceeeccccC-ccccc-c------------cccCCHHHHHHHHHHHHHHhCCC
Confidence 4688889888775 5788899999876 888888874 22100 0 01112223344555555554 55
Q ss_pred CeEEEEEEeccHHHHHHhhcC-----CCccEEEEecCCC
Q 024721 140 SAVGAAGFCWGGKVAVKLASN-----QDVQAAVLLHPSN 173 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a~~-----~~i~~~v~~~~~~ 173 (263)
.++.+.|||+||.+++.+|.. ..+..++++....
T Consensus 65 GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~ 103 (257)
T COG3319 65 GPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVP 103 (257)
T ss_pred CCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCC
Confidence 599999999999999998832 3677777776544
No 172
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.54 E-value=0.0014 Score=54.76 Aligned_cols=127 Identities=11% Similarity=0.129 Sum_probs=77.1
Q ss_pred CeeEEEEecccCCCchhhHHHHHHHHhCCC--EEEeecCC-CCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 60 KKAVLMISDIYGDEPPIYRSVADKVAGAGF--LVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~--~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
+..+|++||....-......+++-....|+ ..+.+.|+ .|+-..+.- .+.+......++..++++|.+
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~---------DreS~~~Sr~aLe~~lr~La~ 186 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNY---------DRESTNYSRPALERLLRYLAT 186 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeeccc---------chhhhhhhHHHHHHHHHHHHh
Confidence 345666676554433455666776666664 56666765 333111111 011112334678899999987
Q ss_pred c-CCCeEEEEEEeccHHHHHHhhc-----C-----CCccEEEEecCCCCCh------hhhhcccccEEEEecCCCC
Q 024721 137 K-GVSAVGAAGFCWGGKVAVKLAS-----N-----QDVQAAVLLHPSNVTE------DEIKVVKVPIAVLGAERDN 195 (263)
Q Consensus 137 ~-~~~~i~~~G~S~Gg~~a~~~a~-----~-----~~i~~~v~~~~~~~~~------~~~~~~~~p~l~i~G~~D~ 195 (263)
. ...+|.+++||||..+++...+ . .+|+-+++..|..... ..+.+.+.|.-+....+|.
T Consensus 187 ~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~~~mg~~~~~ft~~~s~dDr 262 (377)
T COG4782 187 DKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQIAAMGKPDPPFTLFVSRDDR 262 (377)
T ss_pred CCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHHHHhcCCCCCeeEEecccch
Confidence 6 4679999999999999987642 1 2688888888876421 1234455666665555553
No 173
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.48 E-value=0.00038 Score=48.22 Aligned_cols=59 Identities=20% Similarity=0.187 Sum_probs=48.2
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHH
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFE 256 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 256 (263)
..|+|++.++.|+..|.+..+.+.+.+. +.+++.+++.||+.....+ .-+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-----~s~lvt~~g~gHg~~~~~s----------~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-----GSRLVTVDGAGHGVYAGGS----------PCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-----CceEEEEeccCcceecCCC----------hHHHHHHHHHHH
Confidence 5899999999999999999999999984 3689999999999874222 355667777776
No 174
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.44 E-value=0.0021 Score=58.64 Aligned_cols=100 Identities=23% Similarity=0.163 Sum_probs=57.8
Q ss_pred CCeeEEEeCCC----------CCCeeEEEEecccCCCchhhHHHHHHHHh----------------CCCEEEeecCCCCC
Q 024721 47 GGLKAYVTGPP----------HSKKAVLMISDIYGDEPPIYRSVADKVAG----------------AGFLVVAPDFFHGD 100 (263)
Q Consensus 47 ~~~~~~~~~~~----------~~~~~vv~~h~~~g~~~~~~~~~~~~l~~----------------~G~~vv~~d~~~g~ 100 (263)
+....|+++.+ -++-||+++.|-.|+..+ .+.++..... ..|..+++|+ .+.
T Consensus 66 ~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQ-vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDF-nEe 143 (973)
T KOG3724|consen 66 DKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQ-VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDF-NEE 143 (973)
T ss_pred CceEEEEecccccccccccccCCCceEEEecCCCCchHH-HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcc-cch
Confidence 33666666542 134589999988886532 3444443331 1245555555 111
Q ss_pred CCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-------C---CCeEEEEEEeccHHHHHHhhc
Q 024721 101 AANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-------G---VSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-------~---~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
...+.+....+.++.+..++.++... + +..|+++||||||.+|..++.
T Consensus 144 -----------~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 144 -----------FTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT 201 (973)
T ss_pred -----------hhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh
Confidence 00111223345556666777666543 1 457999999999999998773
No 175
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.40 E-value=0.00057 Score=54.17 Aligned_cols=27 Identities=11% Similarity=0.336 Sum_probs=19.8
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHh
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAG 86 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~ 86 (263)
+...||++||..|.. ..+..+.+.+..
T Consensus 3 ~~hLvV~vHGL~G~~-~d~~~~~~~l~~ 29 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNP-ADMRYLKNHLEK 29 (217)
T ss_pred CCEEEEEeCCCCCCH-HHHHHHHHHHHH
Confidence 446788888888875 467777777766
No 176
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.29 E-value=0.00093 Score=53.25 Aligned_cols=57 Identities=18% Similarity=0.240 Sum_probs=40.7
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 186 IAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 186 ~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
+.++.+++|..+|...+..+-+.++ .+++.+.+| ||...--.. .+...+.|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP-----g~eVr~~eg-GHVsayl~k---------~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP-----GCEVRYLEG-GHVSAYLFK---------QDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC-----CCEEEEeec-Cceeeeehh---------chHHHHHHHHHHHh
Confidence 6777899999999988888877774 477778874 896532221 34666777777764
No 177
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.27 E-value=0.00096 Score=58.66 Aligned_cols=110 Identities=19% Similarity=0.116 Sum_probs=65.6
Q ss_pred eeEEEEecccCCCch--hhHHHHHHHHhC-CCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 61 KAVLMISDIYGDEPP--IYRSVADKVAGA-GFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~--~~~~~~~~l~~~-G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
.||+++-||-+.-.. ....+...||++ |-.+++.++| .|.+....+... +-++-.+.++.+.|+..++++++.
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~---~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLST---ENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGG---STTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccch---hhHHhcCHHHHHHHHHHHHHHHHH
Confidence 346666665553222 123355667765 8899999998 787654332111 122234568899999999999985
Q ss_pred c----CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCC
Q 024721 137 K----GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSN 173 (263)
Q Consensus 137 ~----~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~ 173 (263)
. ...+++++|-|.||.++.++- +.| -+.+.++.++..
T Consensus 106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp HTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred hhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 4 345999999999999999976 455 677777776554
No 178
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.26 E-value=0.012 Score=52.12 Aligned_cols=71 Identities=14% Similarity=0.110 Sum_probs=50.0
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhhC
Q 024721 184 VPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKCD 262 (263)
Q Consensus 184 ~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~~ 262 (263)
.|+.|+.-..|++.. +.-.+..+|+ +.|..+.+.+.++..|+|..-.-.+ .+..+.-+..++-|+..|..+
T Consensus 788 Pp~~i~ac~mDP~LD--D~vmfA~kLr-~lG~~v~l~vle~lPHGFLnft~ls-----~E~~~~~~~CI~rl~~~L~~~ 858 (880)
T KOG4388|consen 788 PPVHIVACAMDPMLD--DSVMFARKLR-NLGQPVTLRVLEDLPHGFLNFTALS-----RETRQAAELCIERLRLVLTPP 858 (880)
T ss_pred CCceEEEeccCcchh--HHHHHHHHHH-hcCCceeehhhhcCCccceeHHhhC-----HHHHHHHHHHHHHHHHHhCCC
Confidence 478899999999874 4556778884 4667899999999999996432221 234566666777777666543
No 179
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.18 E-value=0.0046 Score=48.43 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=28.2
Q ss_pred CCCeEEEEEEeccHHHHHHhhcCCCccEEEEecCCC
Q 024721 138 GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSN 173 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~ 173 (263)
..++|.++++|||-.+|..+....+++..+++.|-.
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~~~~aiAINGT~ 90 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIPFKRAIAINGTP 90 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCCcceeEEEECCC
Confidence 356899999999999988876656677777777654
No 180
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.17 E-value=0.0054 Score=47.58 Aligned_cols=137 Identities=20% Similarity=0.140 Sum_probs=75.5
Q ss_pred hhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-CCCeEEEEEEeccHHH
Q 024721 75 PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-GVSAVGAAGFCWGGKV 153 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~ 153 (263)
..|..++..+.. .+.|+.++.+ |.+.... .. ...+ ..+....+.+... ...++.++|||+||.+
T Consensus 13 ~~~~~~~~~l~~-~~~v~~~~~~-g~~~~~~-~~---------~~~~---~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 13 HEYARLAAALRG-RRDVSALPLP-GFGPGEP-LP---------ASAD---ALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred HHHHHHHHhcCC-CccEEEecCC-CCCCCCC-CC---------CCHH---HHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 457778888865 5899999984 3321100 00 0011 1122223333332 3558999999999999
Q ss_pred HHHhhcC-----CCccEEEEecCCCCC--------------------------h-------h--------hhhcccccEE
Q 024721 154 AVKLASN-----QDVQAAVLLHPSNVT--------------------------E-------D--------EIKVVKVPIA 187 (263)
Q Consensus 154 a~~~a~~-----~~i~~~v~~~~~~~~--------------------------~-------~--------~~~~~~~p~l 187 (263)
+..++.. ..+.+++........ . . ....+.+|+.
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDARLTAMGAYLRLFGGWTPGPVAAPTL 157 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccchhhhHHHHHHHHhccCCCCCCCCCEE
Confidence 9887732 256666655432100 0 0 0123467899
Q ss_pred EEecCCCCCC-ChHHHHHHHHHHHcCCCCceeEEEcCCCCccccc
Q 024721 188 VLGAERDNGL-PPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTV 231 (263)
Q Consensus 188 ~i~G~~D~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~ 231 (263)
++.+++|... +......|.+. .....+++.++| +|.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~W~~~----~~~~~~~~~~~g-~H~~~~ 197 (212)
T smart00824 158 LVRASEPLAEWPDEDPDGWRAH----WPLPHTVVDVPG-DHFTMM 197 (212)
T ss_pred EEeccCCCCCCCCCCcccccCC----CCCCceeEEccC-chHHHH
Confidence 9988888543 22222223222 223678889985 886643
No 181
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.09 E-value=0.0017 Score=54.96 Aligned_cols=97 Identities=19% Similarity=0.213 Sum_probs=62.1
Q ss_pred CeeEEEEecccCCCchhhHHHHHHHHhCCCE---EEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh
Q 024721 60 KKAVLMISDIYGDEPPIYRSVADKVAGAGFL---VVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~---vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
.-+++++||..+. ...+..+...+.+.|+. +..+++..... . .+.....+.+...++.+..
T Consensus 59 ~~pivlVhG~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~--------------~~~~~~~~ql~~~V~~~l~ 122 (336)
T COG1075 59 KEPIVLVHGLGGG-YGNFLPLDYRLAILGWLTNGVYAFELSGGDG-T--------------YSLAVRGEQLFAYVDEVLA 122 (336)
T ss_pred CceEEEEccCcCC-cchhhhhhhhhcchHHHhcccccccccccCC-C--------------ccccccHHHHHHHHHHHHh
Confidence 3479999998444 35677788788888887 88887732211 0 0111122334444433332
Q ss_pred -cCCCeEEEEEEeccHHHHHHhhcC-C---CccEEEEecCC
Q 024721 137 -KGVSAVGAAGFCWGGKVAVKLASN-Q---DVQAAVLLHPS 172 (263)
Q Consensus 137 -~~~~~i~~~G~S~Gg~~a~~~a~~-~---~i~~~v~~~~~ 172 (263)
.+.+++-++||||||..+..++.. + +++.++.+.+.
T Consensus 123 ~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 123 KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 256799999999999999987743 2 68888887654
No 182
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.02 E-value=0.014 Score=49.74 Aligned_cols=99 Identities=15% Similarity=0.089 Sum_probs=62.1
Q ss_pred eEEEEecccCCC-chhhHHHHHHHHhCCCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCC
Q 024721 62 AVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGV 139 (263)
Q Consensus 62 ~vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 139 (263)
|.|+.-.|.+.. .+...+....| +-+-+.+++| .+.+.... .. +...+..+...|...+++.++..-.
T Consensus 64 PtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p------~D-W~~Lti~QAA~D~Hri~~A~K~iY~ 133 (448)
T PF05576_consen 64 PTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEP------AD-WSYLTIWQAASDQHRIVQAFKPIYP 133 (448)
T ss_pred CeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCC------CC-cccccHhHhhHHHHHHHHHHHhhcc
Confidence 444444555532 22323333333 3466777886 34332111 11 2345667888999999999988866
Q ss_pred CeEEEEEEeccHHHHHHhhc-CC-CccEEEEec
Q 024721 140 SAVGAAGFCWGGKVAVKLAS-NQ-DVQAAVLLH 170 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a~-~~-~i~~~v~~~ 170 (263)
.++.-.|.|-||+.++..=+ .| .+.+.|++.
T Consensus 134 ~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 134 GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred CCceecCcCCCceeEEEEeeeCCCCCCeeeeee
Confidence 78999999999999887553 23 788888754
No 183
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.83 E-value=0.0022 Score=55.50 Aligned_cols=82 Identities=16% Similarity=0.138 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhCCCEE-----Ee-ecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCCCeEEEEEEec
Q 024721 76 IYRSVADKVAGAGFLV-----VA-PDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGVSAVGAAGFCW 149 (263)
Q Consensus 76 ~~~~~~~~l~~~G~~v-----v~-~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~ 149 (263)
.|..+++.|.+.||.. .+ +|+|.... ..+.....++..++.+.+...+++.++||||
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-----------------~~~~~~~~lk~~ie~~~~~~~~kv~li~HSm 128 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-----------------ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSM 128 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-----------------hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 6889999999888753 22 46542110 1124456788888887766678999999999
Q ss_pred cHHHHHHhh-cC-------CCccEEEEecCCCC
Q 024721 150 GGKVAVKLA-SN-------QDVQAAVLLHPSNV 174 (263)
Q Consensus 150 Gg~~a~~~a-~~-------~~i~~~v~~~~~~~ 174 (263)
||.++..+. .. ..|+++|.+++...
T Consensus 129 Ggl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 129 GGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred CchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 999999855 21 26899999886653
No 184
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.76 E-value=0.0064 Score=55.12 Aligned_cols=115 Identities=15% Similarity=0.059 Sum_probs=67.6
Q ss_pred eeEEEeCCCCC----CeeEEEEecccC---CCchh-hHHHHHHHHhCCCEEEeecCCCCC-CCCCC-CCCcchhhhhhcC
Q 024721 49 LKAYVTGPPHS----KKAVLMISDIYG---DEPPI-YRSVADKVAGAGFLVVAPDFFHGD-AANPS-NPKYDKDTWRKNH 118 (263)
Q Consensus 49 ~~~~~~~~~~~----~~~vv~~h~~~g---~~~~~-~~~~~~~l~~~G~~vv~~d~~~g~-~~~~~-~~~~~~~~~~~~~ 118 (263)
+..=++.|... .|++|++|||.- ..... .......+..+...||+++||=|. |.-.. +... .+
T Consensus 97 LylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~-~g------ 169 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA-PG------ 169 (545)
T ss_pred ceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCC-CC------
Confidence 55555566533 477889997732 21111 122333444557999999997331 21100 1000 01
Q ss_pred CCccccccHHHHHHHHHhc------CCCeEEEEEEeccHHHHHHhhcCC----CccEEEEecCC
Q 024721 119 TTDKGYEDAKPVIAALKEK------GVSAVGAAGFCWGGKVAVKLASNQ----DVQAAVLLHPS 172 (263)
Q Consensus 119 ~~~~~~~d~~~~~~~l~~~------~~~~i~~~G~S~Gg~~a~~~a~~~----~i~~~v~~~~~ 172 (263)
--...|...+++|+++. |+++|.++|||.||..+-.+...| .++.++..+|.
T Consensus 170 --N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 170 --NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred --cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 11224888889998876 688999999999999998876433 34444444443
No 185
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.54 E-value=0.013 Score=51.90 Aligned_cols=107 Identities=14% Similarity=0.105 Sum_probs=62.7
Q ss_pred CCeeEEEEecccCCCchhhHHHHH------------------HHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVAD------------------KVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 120 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~------------------~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (263)
..|.||+++||.|.+. .+--+.+ .+.+ -..++.+|.+.|.|.+....... ..+.
T Consensus 76 ~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S~~~~~~~------~~~~ 147 (462)
T PTZ00472 76 EAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFSYADKADY------DHNE 147 (462)
T ss_pred CCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcccCCCCCC------CCCh
Confidence 4578999999988652 1111100 1111 25777778755555554321110 1123
Q ss_pred ccccccHHHHHHHHHhc----CCCeEEEEEEeccHHHHHHhhcC----------C--CccEEEEecCCC
Q 024721 121 DKGYEDAKPVIAALKEK----GVSAVGAAGFCWGGKVAVKLASN----------Q--DVQAAVLLHPSN 173 (263)
Q Consensus 121 ~~~~~d~~~~~~~l~~~----~~~~i~~~G~S~Gg~~a~~~a~~----------~--~i~~~v~~~~~~ 173 (263)
++..+|+..+++..-+. ...+++++|+|+||..+..+|.. . .+++++...|..
T Consensus 148 ~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 148 SEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 45667777777654332 34799999999999999887621 1 467776655554
No 186
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.54 E-value=0.0082 Score=47.73 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=33.4
Q ss_pred HHHHHHHh---cCCCeEEEEEEeccHHHHHHhhcC------CCccEEEEecCCCC
Q 024721 129 PVIAALKE---KGVSAVGAAGFCWGGKVAVKLASN------QDVQAAVLLHPSNV 174 (263)
Q Consensus 129 ~~~~~l~~---~~~~~i~~~G~S~Gg~~a~~~a~~------~~i~~~v~~~~~~~ 174 (263)
.+++++.+ .....+.+.|||.||.+|..++.. .+|..++.+.+...
T Consensus 70 ~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 70 SALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 34444443 334469999999999999997732 48999999887654
No 187
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.54 E-value=0.013 Score=43.62 Aligned_cols=73 Identities=11% Similarity=0.046 Sum_probs=46.7
Q ss_pred ccHHHHHHHHHh-cCCCeEEEEEEeccHHHHHHhhc---C---CCccEEEEecCCCCChhh------hhcccccEEEEec
Q 024721 125 EDAKPVIAALKE-KGVSAVGAAGFCWGGKVAVKLAS---N---QDVQAAVLLHPSNVTEDE------IKVVKVPIAVLGA 191 (263)
Q Consensus 125 ~d~~~~~~~l~~-~~~~~i~~~G~S~Gg~~a~~~a~---~---~~i~~~v~~~~~~~~~~~------~~~~~~p~l~i~G 191 (263)
..+...++.... .+..+|.++|||+||.+|..++. . .+...++.+.+....... .......+.-++.
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i~~ 91 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRIVN 91 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEEEE
Confidence 344444444333 25679999999999999999872 1 255667777655432221 2234567888888
Q ss_pred CCCCCC
Q 024721 192 ERDNGL 197 (263)
Q Consensus 192 ~~D~~~ 197 (263)
.+|.+-
T Consensus 92 ~~D~v~ 97 (153)
T cd00741 92 DNDIVP 97 (153)
T ss_pred CCCccC
Confidence 888764
No 188
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.51 E-value=0.0056 Score=51.18 Aligned_cols=89 Identities=16% Similarity=0.118 Sum_probs=70.5
Q ss_pred CCCeEEEEEEeccHHHHHHhh-cCCCccEEEEec-----------------CCCCC------------------------
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA-SNQDVQAAVLLH-----------------PSNVT------------------------ 175 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a-~~~~i~~~v~~~-----------------~~~~~------------------------ 175 (263)
..++..+.|-|.-|..++..| .++++.+++.+. |...+
T Consensus 232 ~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~ 311 (507)
T COG4287 232 EIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLL 311 (507)
T ss_pred eeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHH
Confidence 567899999999999999988 788999888733 21110
Q ss_pred ----h------hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccc
Q 024721 176 ----E------DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWT 230 (263)
Q Consensus 176 ----~------~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 230 (263)
+ ....++..|-+++.+..|++++++....+++.|+ | .+.+.+.|+..|...
T Consensus 312 ~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LP---G-~kaLrmvPN~~H~~~ 372 (507)
T COG4287 312 EIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLP---G-EKALRMVPNDPHNLI 372 (507)
T ss_pred HhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCC---C-ceeeeeCCCCcchhh
Confidence 0 1125677899999999999999999999999984 3 578999999999664
No 189
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.16 E-value=0.0099 Score=53.18 Aligned_cols=89 Identities=11% Similarity=0.092 Sum_probs=57.9
Q ss_pred hhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-CCCeEEEEEEeccHHHH
Q 024721 76 IYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-GVSAVGAAGFCWGGKVA 154 (263)
Q Consensus 76 ~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a 154 (263)
.|..+.+.|++.||. --++ .+.+++....... ....+++...++..|+.+.+. +.++++++||||||.++
T Consensus 157 vw~kLIe~L~~iGY~--~~nL-~gAPYDWRls~~~------le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ 227 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNM-YMAAYDWRLSFQN------TEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYF 227 (642)
T ss_pred eHHHHHHHHHHcCCC--CCce-eecccccccCccc------hhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHH
Confidence 347899999999997 3444 3444333211000 011244556788888887765 46799999999999999
Q ss_pred HHhhc-----------------CCCccEEEEecCCC
Q 024721 155 VKLAS-----------------NQDVQAAVLLHPSN 173 (263)
Q Consensus 155 ~~~a~-----------------~~~i~~~v~~~~~~ 173 (263)
+.... +..|++.|.++|..
T Consensus 228 lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 228 LHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 98542 01467888877654
No 190
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.13 E-value=0.064 Score=43.17 Aligned_cols=97 Identities=16% Similarity=0.120 Sum_probs=62.2
Q ss_pred eeEEEEecccCCCc-hhhHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-
Q 024721 61 KAVLMISDIYGDEP-PIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK- 137 (263)
Q Consensus 61 ~~vv~~h~~~g~~~-~~~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 137 (263)
.|+|++||.+..-. ..+..+.+.+.+. |..|...|...|... .......+++..+-+.+...
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~---------------s~l~pl~~Qv~~~ce~v~~m~ 88 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKD---------------SSLMPLWEQVDVACEKVKQMP 88 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcch---------------hhhccHHHHHHHHHHHHhcch
Confidence 46888898765432 2366777777765 899999998333110 01122334455555555432
Q ss_pred -CCCeEEEEEEeccHHHHHHhhc---CCCccEEEEecCC
Q 024721 138 -GVSAVGAAGFCWGGKVAVKLAS---NQDVQAAVLLHPS 172 (263)
Q Consensus 138 -~~~~i~~~G~S~Gg~~a~~~a~---~~~i~~~v~~~~~ 172 (263)
-.+-+.++|.|+||.++-.++. .|.++..|+..+.
T Consensus 89 ~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 89 ELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred hccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 2457899999999999998883 3688888886643
No 191
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.02 E-value=0.012 Score=45.79 Aligned_cols=72 Identities=18% Similarity=0.201 Sum_probs=44.7
Q ss_pred HHHHHhCCCEEEeecCCCCC--CCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc--CCCeEEEEEEeccHHHHHH
Q 024721 81 ADKVAGAGFLVVAPDFFHGD--AANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK--GVSAVGAAGFCWGGKVAVK 156 (263)
Q Consensus 81 ~~~l~~~G~~vv~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~i~~~G~S~Gg~~a~~ 156 (263)
+..|.+. ..|++|-||.-. .......... ....+-...|+..+.++..++ +.++++++|||+|+.+..+
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~------~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~ 111 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDA------EKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLR 111 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchh------HHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHH
Confidence 3344433 689999986322 1110111111 111244568999999866554 4569999999999999999
Q ss_pred hhc
Q 024721 157 LAS 159 (263)
Q Consensus 157 ~a~ 159 (263)
+.+
T Consensus 112 LL~ 114 (207)
T PF11288_consen 112 LLK 114 (207)
T ss_pred HHH
Confidence 874
No 192
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.00 E-value=0.077 Score=39.77 Aligned_cols=105 Identities=12% Similarity=0.171 Sum_probs=67.8
Q ss_pred cccccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhh-cCC-CccEEEEecCCCC------------------------
Q 024721 122 KGYEDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLA-SNQ-DVQAAVLLHPSNV------------------------ 174 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a-~~~-~i~~~v~~~~~~~------------------------ 174 (263)
..++.=.+.-+|+.++ =+.+-.+-|-||||..+..+. ++| -+..+|+++|...
T Consensus 82 dr~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg 161 (227)
T COG4947 82 DRAERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPG 161 (227)
T ss_pred HHHHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhccC
Confidence 3344445555666655 234567789999999999977 555 5667777666531
Q ss_pred --Chhhhhcc-cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccc
Q 024721 175 --TEDEIKVV-KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGW 229 (263)
Q Consensus 175 --~~~~~~~~-~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 229 (263)
++..+.++ +..+.+.+|..|+..+. .+.+.+.+ +....+..+.++.|..|.+
T Consensus 162 ~~dp~~l~rlr~~~~vfc~G~e~~~L~~--~~~L~~~l-~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 162 LADPFRLERLRRIDMVFCIGDEDPFLDN--NQHLSRLL-SDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred CcChHHHHHHhhccEEEEecCccccccc--hHHHHHHh-ccccccHHHHHhccccccc
Confidence 11122222 45688889999998864 45677777 4455567777787777755
No 193
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.98 E-value=0.023 Score=48.44 Aligned_cols=97 Identities=19% Similarity=0.206 Sum_probs=63.6
Q ss_pred eeEEEEecccCCCchhh---HHHHHHHHhC-CCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHH
Q 024721 61 KAVLMISDIYGDEPPIY---RSVADKVAGA-GFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 135 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~---~~~~~~l~~~-G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 135 (263)
.||++.-|--|+- .++ .+++..++.+ +-.+|-+++| .|.+...+.......+...-.+.++...|...++..++
T Consensus 81 gPIffYtGNEGdi-e~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDI-EWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CceEEEeCCcccH-HHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 4567666554431 222 2334444443 6788888998 78776655432222223333455788899999999998
Q ss_pred hc---CCCeEEEEEEeccHHHHHHhh
Q 024721 136 EK---GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 136 ~~---~~~~i~~~G~S~Gg~~a~~~a 158 (263)
+. ...+|+.+|-|.||+++.+.=
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfR 185 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFR 185 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHH
Confidence 76 456999999999999998854
No 194
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.94 E-value=0.33 Score=41.10 Aligned_cols=68 Identities=12% Similarity=0.137 Sum_probs=53.1
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
..+.+.+++..|.++|.+..+++.+.. +..|.++...-+.++.|--..+..+ ...++.+.+|+++...
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~-~~~g~~v~s~~~~ds~H~~h~r~~p---------~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALR-REKGVNVKSVKFKDSEHVAHFRSFP---------KTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHH-HhcCceEEEeeccCccceeeeccCc---------HHHHHHHHHHHHhccc
Confidence 568899999999999999999987776 4456677777777788866554443 5788899999987654
No 195
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.84 E-value=0.053 Score=41.36 Aligned_cols=74 Identities=15% Similarity=0.129 Sum_probs=50.3
Q ss_pred cccHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhhcC--CCccEEEEecCCCCChhhhhccc---ccEEEEecCCCCC
Q 024721 124 YEDAKPVIAALKEK--GVSAVGAAGFCWGGKVAVKLASN--QDVQAAVLLHPSNVTEDEIKVVK---VPIAVLGAERDNG 196 (263)
Q Consensus 124 ~~d~~~~~~~l~~~--~~~~i~~~G~S~Gg~~a~~~a~~--~~i~~~v~~~~~~~~~~~~~~~~---~p~l~i~G~~D~~ 196 (263)
..++..+++-|+.. +..++.++|||+|..++-.+++. ..+..++.+............+. ..++...+.+|++
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~a~~l~~~~~~v~a~~a~~D~I 170 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDSASDLGVPPGHVYAMTAPGDPI 170 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCCHHHcCCCCCcEEEeeCCCCCc
Confidence 34566666666554 35599999999999999998865 47777776653333323333333 4589999988876
Q ss_pred C
Q 024721 197 L 197 (263)
Q Consensus 197 ~ 197 (263)
-
T Consensus 171 ~ 171 (177)
T PF06259_consen 171 A 171 (177)
T ss_pred c
Confidence 3
No 196
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.84 E-value=0.014 Score=42.52 Aligned_cols=21 Identities=24% Similarity=0.245 Sum_probs=18.7
Q ss_pred CCCeEEEEEEeccHHHHHHhh
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a 158 (263)
...+|.+.|||+||.+|..++
T Consensus 62 ~~~~i~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 62 PDYSIVITGHSLGGALASLAA 82 (140)
T ss_dssp TTSEEEEEEETHHHHHHHHHH
T ss_pred cCccchhhccchHHHHHHHHH
Confidence 446999999999999999877
No 197
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.83 E-value=0.061 Score=43.94 Aligned_cols=102 Identities=15% Similarity=0.215 Sum_probs=47.0
Q ss_pred CeeEEEEecccCCC--chhhHHHHHHHHhC--CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHH
Q 024721 60 KKAVLMISDIYGDE--PPIYRSVADKVAGA--GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 135 (263)
Q Consensus 60 ~~~vv~~h~~~g~~--~~~~~~~~~~l~~~--G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 135 (263)
..|||+.||....- ...+..+.+.+.+. |--|..++. |.+... .....++ ....+.+..+.+.+.
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i--g~~~~~----D~~~s~f-----~~v~~Qv~~vc~~l~ 73 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI--GNDPSE----DVENSFF-----GNVNDQVEQVCEQLA 73 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S--SSSHHH----HHHHHHH-----SHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE--CCCcch----hhhhhHH-----HHHHHHHHHHHHHHh
Confidence 34788888875431 11344444433332 777777776 221000 0001111 112233334444444
Q ss_pred hcC--CCeEEEEEEeccHHHHHHhh---cCCCccEEEEecCC
Q 024721 136 EKG--VSAVGAAGFCWGGKVAVKLA---SNQDVQAAVLLHPS 172 (263)
Q Consensus 136 ~~~--~~~i~~~G~S~Gg~~a~~~a---~~~~i~~~v~~~~~ 172 (263)
+.. .+-+.++|+|+||.+.-.++ ..+.++-+|++.+.
T Consensus 74 ~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 74 NDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp H-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred hChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 321 25799999999999998887 34689999998754
No 198
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.59 E-value=0.38 Score=42.19 Aligned_cols=104 Identities=16% Similarity=0.089 Sum_probs=58.8
Q ss_pred EEEeCCCCCCeeEEEEecccCCCchhhH--HHHHHHHhCCCEEEee-cCC-CCCCCCCCCCCcchhhhhhcCCCcccccc
Q 024721 51 AYVTGPPHSKKAVLMISDIYGDEPPIYR--SVADKVAGAGFLVVAP-DFF-HGDAANPSNPKYDKDTWRKNHTTDKGYED 126 (263)
Q Consensus 51 ~~~~~~~~~~~~vv~~h~~~g~~~~~~~--~~~~~l~~~G~~vv~~-d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (263)
.|++.|..-+||+.+...|+-.. .-+. .+++ ..|.-.+.+ |.| -|.....+ .+++.+.
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~a-EGFEgy~MMk---~Lg~PfLL~~DpRleGGaFYlG--------------s~eyE~~ 340 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRPA-EGFEGYFMMK---RLGAPFLLIGDPRLEGGAFYLG--------------SDEYEQG 340 (511)
T ss_pred EEecCCcCCCCCeEEeeccCccc-CcchhHHHHH---hcCCCeEEeeccccccceeeeC--------------cHHHHHH
Confidence 45566776667766555554332 2222 2333 345544444 665 23221111 1222334
Q ss_pred HHHHHHH-HHhc--CCCeEEEEEEeccHHHHHHhhcCCCccEEEEecCC
Q 024721 127 AKPVIAA-LKEK--GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPS 172 (263)
Q Consensus 127 ~~~~~~~-l~~~--~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~ 172 (263)
+..+++. |... +.+.+++.|-|||..-|+.+++.-...|++.--|-
T Consensus 341 I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~AIiVgKPL 389 (511)
T TIGR03712 341 IINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPHAIIVGKPL 389 (511)
T ss_pred HHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCceEEEcCcc
Confidence 4444432 2222 46689999999999999999987777888775543
No 199
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.55 E-value=0.069 Score=42.59 Aligned_cols=72 Identities=17% Similarity=0.103 Sum_probs=40.6
Q ss_pred ccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhhc-------CCCccEEEEecCCCCChhhhh---cccccEEEEecCC
Q 024721 125 EDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLAS-------NQDVQAAVLLHPSNVTEDEIK---VVKVPIAVLGAER 193 (263)
Q Consensus 125 ~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~-------~~~i~~~v~~~~~~~~~~~~~---~~~~p~l~i~G~~ 193 (263)
+++...++.+.+. +..+|.++|||+||.+|..++. ...+..+..-.|......... ....-++-+.-.+
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg~~~~a~~~~~~~~~~~rvv~~~ 191 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVGNAAFAEYLESTKGRVYRVVHGN 191 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCCCHHHHHHhhccCCCEEEEEECC
Confidence 3444444433333 4568999999999999998772 124554444444443333222 3344455555556
Q ss_pred CCC
Q 024721 194 DNG 196 (263)
Q Consensus 194 D~~ 196 (263)
|.+
T Consensus 192 D~V 194 (229)
T cd00519 192 DIV 194 (229)
T ss_pred Ccc
Confidence 754
No 200
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=95.43 E-value=0.47 Score=38.87 Aligned_cols=71 Identities=14% Similarity=0.046 Sum_probs=49.5
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhh
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVK 260 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~ 260 (263)
.+.++-+-||+|++.-..+.+...+.+..-+....+..+-|++||-=...++ +-+++....+.+|+.++=+
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGs-------rfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGS-------RFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccc-------hHHHHHHHHHHHHHHHhCc
Confidence 4568889999999987766666666553222224667788999995433322 3478899999999997644
No 201
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.27 E-value=0.11 Score=43.91 Aligned_cols=102 Identities=24% Similarity=0.337 Sum_probs=64.3
Q ss_pred eeCCeeEEEeC--CC-C---C-CeeEEEEecccCCCchhhHHHHHHHHhC---C------CEEEeecCCCCCCCCCCCCC
Q 024721 45 ELGGLKAYVTG--PP-H---S-KKAVLMISDIYGDEPPIYRSVADKVAGA---G------FLVVAPDFFHGDAANPSNPK 108 (263)
Q Consensus 45 ~~~~~~~~~~~--~~-~---~-~~~vv~~h~~~g~~~~~~~~~~~~l~~~---G------~~vv~~d~~~g~~~~~~~~~ 108 (263)
.+.|+++.... |+ . + -.|++++||+.|+-.++ ..+..-|-+. | |.|++|.. .|-+++.....
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EF-ykfIPlLT~p~~hg~~~d~~FEVI~PSl-PGygwSd~~sk 207 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREF-YKFIPLLTDPKRHGNESDYAFEVIAPSL-PGYGWSDAPSK 207 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHHHH-HhhhhhhcCccccCCccceeEEEeccCC-CCcccCcCCcc
Confidence 56776655432 22 1 1 24799999999986544 4555555443 2 88999998 67666655433
Q ss_pred cchhhhhhcCCCccccccHHHHHH-HHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 109 YDKDTWRKNHTTDKGYEDAKPVIA-ALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 109 ~~~~~~~~~~~~~~~~~d~~~~~~-~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
.+++. ..+..+++ .+...+.++.++=|-.||..++-.+|+
T Consensus 208 ~GFn~-----------~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlas 248 (469)
T KOG2565|consen 208 TGFNA-----------AATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLAS 248 (469)
T ss_pred CCccH-----------HHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHh
Confidence 33211 12222222 333448899999999999999999884
No 202
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.27 E-value=0.025 Score=48.99 Aligned_cols=69 Identities=14% Similarity=0.223 Sum_probs=47.5
Q ss_pred hhHHHHHHHHhCCCE----E--EeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-CCCeEEEEEEe
Q 024721 76 IYRSVADKVAGAGFL----V--VAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-GVSAVGAAGFC 148 (263)
Q Consensus 76 ~~~~~~~~l~~~G~~----v--v~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~~~G~S 148 (263)
+|..+.+.|+.-||. + +.+|+|-+- .+....+++..+++..++...+. +.++|++++||
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~--------------~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHS 190 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSY--------------HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHS 190 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhcc--------------CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecC
Confidence 567788888888887 3 334543111 01122345567788888877666 45899999999
Q ss_pred ccHHHHHHhh
Q 024721 149 WGGKVAVKLA 158 (263)
Q Consensus 149 ~Gg~~a~~~a 158 (263)
||+.+.+...
T Consensus 191 MG~l~~lyFl 200 (473)
T KOG2369|consen 191 MGGLYVLYFL 200 (473)
T ss_pred CccHHHHHHH
Confidence 9999999876
No 203
>PLN02606 palmitoyl-protein thioesterase
Probab=95.24 E-value=0.18 Score=41.74 Aligned_cols=95 Identities=12% Similarity=0.014 Sum_probs=54.8
Q ss_pred eeEEEEeccc--CCCchhhHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 61 KAVLMISDIY--GDEPPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 61 ~~vv~~h~~~--g~~~~~~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
.|||+.||.. ..+ +.+..+.+.+.+. |+-+..+.. + .+. ..+ ++ ....+++..+-+.+.+.
T Consensus 27 ~PvViwHGlgD~~~~-~~~~~~~~~i~~~~~~pg~~v~i-g-~~~-----~~s---~~-----~~~~~Qv~~vce~l~~~ 90 (306)
T PLN02606 27 VPFVLFHGFGGECSN-GKVSNLTQFLINHSGYPGTCVEI-G-NGV-----QDS---LF-----MPLRQQASIACEKIKQM 90 (306)
T ss_pred CCEEEECCCCcccCC-chHHHHHHHHHhCCCCCeEEEEE-C-CCc-----ccc---cc-----cCHHHHHHHHHHHHhcc
Confidence 4688899876 232 3667777777533 654444433 1 110 001 10 12224444444444432
Q ss_pred --CCCeEEEEEEeccHHHHHHhh---cC-CCccEEEEecC
Q 024721 138 --GVSAVGAAGFCWGGKVAVKLA---SN-QDVQAAVLLHP 171 (263)
Q Consensus 138 --~~~~i~~~G~S~Gg~~a~~~a---~~-~~i~~~v~~~~ 171 (263)
-.+-+-++|+|+||.+.-.++ .. |.++-.|.+.+
T Consensus 91 ~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 91 KELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred hhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 124699999999999998877 23 57888888653
No 204
>PLN02633 palmitoyl protein thioesterase family protein
Probab=94.83 E-value=0.36 Score=40.04 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=56.3
Q ss_pred eeEEEEecccCCC-chhhHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-
Q 024721 61 KAVLMISDIYGDE-PPIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK- 137 (263)
Q Consensus 61 ~~vv~~h~~~g~~-~~~~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 137 (263)
.|+|+.||....- .+.+..+.+.+.+. |.-+..+.. |.+.. ..|+ ....+++..+-+.+.+.
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i--g~~~~--------~s~~-----~~~~~Qve~vce~l~~~~ 90 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI--GNGVG--------DSWL-----MPLTQQAEIACEKVKQMK 90 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE--CCCcc--------ccce-----eCHHHHHHHHHHHHhhch
Confidence 4678888764321 23566677766553 666666654 22210 1111 12224444444444432
Q ss_pred -CCCeEEEEEEeccHHHHHHhh---cC-CCccEEEEecCC
Q 024721 138 -GVSAVGAAGFCWGGKVAVKLA---SN-QDVQAAVLLHPS 172 (263)
Q Consensus 138 -~~~~i~~~G~S~Gg~~a~~~a---~~-~~i~~~v~~~~~ 172 (263)
-.+-+.++|+|+||.++-.++ .. |.++..|++.+.
T Consensus 91 ~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 91 ELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred hhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 124699999999999998877 23 579999887653
No 205
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.70 E-value=0.062 Score=41.18 Aligned_cols=74 Identities=15% Similarity=0.094 Sum_probs=46.8
Q ss_pred cccHHHHHHHHHhcC-CCeEEEEEEeccHHHHHHhhcC--------CCccEEEEecCCCCCh--hhh-hcccccEEEEec
Q 024721 124 YEDAKPVIAALKEKG-VSAVGAAGFCWGGKVAVKLASN--------QDVQAAVLLHPSNVTE--DEI-KVVKVPIAVLGA 191 (263)
Q Consensus 124 ~~d~~~~~~~l~~~~-~~~i~~~G~S~Gg~~a~~~a~~--------~~i~~~v~~~~~~~~~--~~~-~~~~~p~l~i~G 191 (263)
..++...++.....+ ..+|+++|+|+|+.++..++.. .+|.+++++....... ... ....-.++-++-
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~~~~~~~~~~~~~~C~ 143 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQPGIPGDYSDRVRSYCN 143 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTTTBTCSCGGGEEEE-B
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCccccCcccccceeEEcC
Confidence 355555555555554 4599999999999999997744 2788888886433221 111 223345788888
Q ss_pred CCCCCC
Q 024721 192 ERDNGL 197 (263)
Q Consensus 192 ~~D~~~ 197 (263)
..|.++
T Consensus 144 ~gD~vC 149 (179)
T PF01083_consen 144 PGDPVC 149 (179)
T ss_dssp TT-GGG
T ss_pred CCCccc
Confidence 888776
No 206
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.60 E-value=0.074 Score=39.38 Aligned_cols=34 Identities=12% Similarity=0.183 Sum_probs=27.9
Q ss_pred CeEEEEEEeccHHHHHHhhcCCCccEEEEecCCC
Q 024721 140 SAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPSN 173 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~~ 173 (263)
+.|.++.+|||-.++-++.+.-+++...++.|-.
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~lksatAiNGTg 90 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIRLKSATAINGTG 90 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhccccceeeecCCC
Confidence 3677999999999998888877888888887654
No 207
>PLN02847 triacylglycerol lipase
Probab=94.12 E-value=0.19 Score=45.21 Aligned_cols=21 Identities=24% Similarity=0.265 Sum_probs=18.5
Q ss_pred CCCeEEEEEEeccHHHHHHhh
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a 158 (263)
+.-++.++|||+||.+|..++
T Consensus 249 PdYkLVITGHSLGGGVAALLA 269 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLT 269 (633)
T ss_pred CCCeEEEeccChHHHHHHHHH
Confidence 445899999999999999977
No 208
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.44 E-value=0.25 Score=44.01 Aligned_cols=74 Identities=15% Similarity=0.095 Sum_probs=55.8
Q ss_pred hhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCC-------CceeEEEcCCCCccccccCCCCChhhhhHHHHHHH
Q 024721 177 DEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPK-------FDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHE 249 (263)
Q Consensus 177 ~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~ 249 (263)
..+++-...+|+.||..|+++|+.....+++++....+ .-.++.+.||.+|-........ -+.+.
T Consensus 347 saF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~--------~d~l~ 418 (474)
T PF07519_consen 347 SAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDP--------FDALT 418 (474)
T ss_pred HHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCC--------CCHHH
Confidence 44555567899999999999999888888888754332 2478899999999875443321 36888
Q ss_pred HHHHHHHHH
Q 024721 250 DMINWFEKH 258 (263)
Q Consensus 250 ~~~~fl~~~ 258 (263)
.+++|+++=
T Consensus 419 aL~~WVE~G 427 (474)
T PF07519_consen 419 ALVDWVENG 427 (474)
T ss_pred HHHHHHhCC
Confidence 899999853
No 209
>PLN02310 triacylglycerol lipase
Probab=93.29 E-value=0.057 Score=46.46 Aligned_cols=61 Identities=18% Similarity=0.274 Sum_probs=36.4
Q ss_pred CeEEEEEEeccHHHHHHhhcC-----CCc-cEEEEecCCCC-Ch---hhhhcccccEEEEecCCCCC--CChH
Q 024721 140 SAVGAAGFCWGGKVAVKLASN-----QDV-QAAVLLHPSNV-TE---DEIKVVKVPIAVLGAERDNG--LPPA 200 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a~~-----~~i-~~~v~~~~~~~-~~---~~~~~~~~p~l~i~G~~D~~--~~~~ 200 (263)
.+|.++|||+||.+|...|.+ +.+ -.++.+..... .. +.+......++=+.-.+|.+ +|+.
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~~~~~~~RVvn~~DiVP~lPp~ 281 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAFKEKLNELGVKTLRVVVKQDKVPKLPGL 281 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHHHHHHHhcCCCEEEEEECCCccCccCcc
Confidence 489999999999999987721 221 12334432222 11 22333456677777778865 5653
No 210
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.24 E-value=0.97 Score=35.35 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=26.7
Q ss_pred CCCeEEEEEEeccHHHHHHhh-cC---CCccEEEEecCC
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA-SN---QDVQAAVLLHPS 172 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a-~~---~~i~~~v~~~~~ 172 (263)
....++++.||.||..++.+. +. .++.++++-...
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 567899999999999999987 33 366666665544
No 211
>PLN02209 serine carboxypeptidase
Probab=93.11 E-value=1.1 Score=39.53 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=25.5
Q ss_pred CCeEEEEEEeccHHHHHHhhc-----C-----C--CccEEEEecCCC
Q 024721 139 VSAVGAAGFCWGGKVAVKLAS-----N-----Q--DVQAAVLLHPSN 173 (263)
Q Consensus 139 ~~~i~~~G~S~Gg~~a~~~a~-----~-----~--~i~~~v~~~~~~ 173 (263)
.+++.+.|.|.||..+-.+|. + + .+++++...|..
T Consensus 166 ~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 166 SNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred CCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 458999999999998887762 1 1 566777766654
No 212
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.03 E-value=0.76 Score=40.48 Aligned_cols=78 Identities=17% Similarity=0.141 Sum_probs=42.7
Q ss_pred CEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHH-HHHhc---CCCeEEEEEEeccHHHHHHhhc-----
Q 024721 89 FLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIA-ALKEK---GVSAVGAAGFCWGGKVAVKLAS----- 159 (263)
Q Consensus 89 ~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~l~~~---~~~~i~~~G~S~Gg~~a~~~a~----- 159 (263)
..++-+|.+-|.|.+....... ...+ ...++|+..+++ ++... ..+++++.|.|.||..+-.+|.
T Consensus 116 anllfiDqPvGtGfSy~~~~~~-----~~~d-~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~ 189 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPID-----KTGD-ISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQG 189 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCC-----ccCC-HHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhh
Confidence 5677778765666554322111 0000 111134433333 33222 3468999999999998887762
Q ss_pred C-----C--CccEEEEecCC
Q 024721 160 N-----Q--DVQAAVLLHPS 172 (263)
Q Consensus 160 ~-----~--~i~~~v~~~~~ 172 (263)
+ + .+++++...|.
T Consensus 190 n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 190 NYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred cccccCCcccceeeEecCCC
Confidence 1 1 56777775554
No 213
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=93.03 E-value=0.24 Score=38.04 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=61.8
Q ss_pred CccEEEEecCCCCChhhhhcccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhh
Q 024721 162 DVQAAVLLHPSNVTEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAV 241 (263)
Q Consensus 162 ~i~~~v~~~~~~~~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~ 241 (263)
-.++-..+.|-...+..+. ++++|-+-|++|++....+.+...+.+..-+...+..++.+|+||-=.....
T Consensus 115 L~~G~~~~~Gr~Vdp~aI~--~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~------- 185 (202)
T PF06850_consen 115 LPRGTWTVRGRPVDPAAIR--RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS------- 185 (202)
T ss_pred ccCCceEECCEEcchHHcc--cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccch-------
Confidence 4455555555554444442 6688889999999999888887777775444446778899999995443332
Q ss_pred hHHHHHHHHHHHHHHHH
Q 024721 242 NSAAEAHEDMINWFEKH 258 (263)
Q Consensus 242 ~~~~~~~~~~~~fl~~~ 258 (263)
.-+++.+..+.+|+.++
T Consensus 186 rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 186 RWREEIYPRIREFIRQH 202 (202)
T ss_pred hhhhhhhHHHHHHHHhC
Confidence 23678888999998764
No 214
>PLN02454 triacylglycerol lipase
Probab=92.96 E-value=0.11 Score=44.90 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=24.8
Q ss_pred cccHHHHHHHHHhc-CCC--eEEEEEEeccHHHHHHhh
Q 024721 124 YEDAKPVIAALKEK-GVS--AVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 124 ~~d~~~~~~~l~~~-~~~--~i~~~G~S~Gg~~a~~~a 158 (263)
.+++...++.+.+. ... +|.++|||+||.+|..+|
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA 246 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAA 246 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHH
Confidence 34555555555443 222 599999999999999987
No 215
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.84 E-value=0.067 Score=47.27 Aligned_cols=77 Identities=18% Similarity=0.272 Sum_probs=44.3
Q ss_pred ccHHHHHHHHHhcC-CCeEEEEEEeccHHHHHHhhc-----CCCc--cEEEEec-CCCCCh---hhhhcccccEEEEecC
Q 024721 125 EDAKPVIAALKEKG-VSAVGAAGFCWGGKVAVKLAS-----NQDV--QAAVLLH-PSNVTE---DEIKVVKVPIAVLGAE 192 (263)
Q Consensus 125 ~d~~~~~~~l~~~~-~~~i~~~G~S~Gg~~a~~~a~-----~~~i--~~~v~~~-~~~~~~---~~~~~~~~p~l~i~G~ 192 (263)
.++..+++..++.+ ...|.++|||+||.+|...|. .+.. -.++.|. |..-.. +.+......++=+.-.
T Consensus 302 ~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~~~l~~~~lRVVN~ 381 (525)
T PLN03037 302 EEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKLNELGVKVLRVVNK 381 (525)
T ss_pred HHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHHHhcCCCEEEEEEC
Confidence 34444444443322 247999999999999999772 1221 2233333 222221 2234445678888888
Q ss_pred CCCC--CChHH
Q 024721 193 RDNG--LPPAQ 201 (263)
Q Consensus 193 ~D~~--~~~~~ 201 (263)
+|.+ +|+..
T Consensus 382 ~DiVP~lPp~~ 392 (525)
T PLN03037 382 QDIVPKLPGII 392 (525)
T ss_pred CCccccCCchh
Confidence 8866 56543
No 216
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.67 E-value=0.35 Score=41.36 Aligned_cols=88 Identities=16% Similarity=0.219 Sum_probs=46.7
Q ss_pred CCCeeEEEEecccCCCchhhHHHHHHHHhC--CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHH
Q 024721 58 HSKKAVLMISDIYGDEPPIYRSVADKVAGA--GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK 135 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~--G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 135 (263)
+++..+|+.||..+.+..++...++..... ++.++.-.+. +.-.. ...... ++. . .....+.+.+.
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~-~~~~~-T~~Gv~---~lG----~---Rla~~~~e~~~ 145 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKM-NNMCQ-TFDGVD---VLG----E---RLAEEVKETLY 145 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccc-cchhh-ccccce---eee----c---ccHHHHhhhhh
Confidence 445679999999885455666777766655 4433333332 11100 000000 000 0 12222333333
Q ss_pred hcCCCeEEEEEEeccHHHHHHh
Q 024721 136 EKGVSAVGAAGFCWGGKVAVKL 157 (263)
Q Consensus 136 ~~~~~~i~~~G~S~Gg~~a~~~ 157 (263)
....++|..+|||.||.++-.+
T Consensus 146 ~~si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 146 DYSIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred ccccceeeeeeeecCCeeeeEE
Confidence 3335799999999999877653
No 217
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=92.47 E-value=0.45 Score=41.41 Aligned_cols=108 Identities=16% Similarity=0.105 Sum_probs=56.4
Q ss_pred CCeeEEEEecccCCCchhhHHHHH-------------------HHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVAD-------------------KVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHT 119 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~-------------------~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~ 119 (263)
..|.||++.||.|.+. .+-.+.+ .+.+ -..++-+|.+-|.|.+....... ...+
T Consensus 39 ~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD~PvGtGfS~~~~~~~-----~~~~ 111 (415)
T PF00450_consen 39 DDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFIDQPVGTGFSYGNDPSD-----YVWN 111 (415)
T ss_dssp SS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE--STTSTT-EESSGGG-----GS-S
T ss_pred CccEEEEecCCceecc-ccccccccCceEEeeccccccccccccccc-ccceEEEeecCceEEeecccccc-----ccch
Confidence 4578999999998653 2211111 0111 25667777655666554432211 0011
Q ss_pred CccccccHHHHHHHH-Hhc---CCCeEEEEEEeccHHHHHHhhc-----C-------CCccEEEEecCCC
Q 024721 120 TDKGYEDAKPVIAAL-KEK---GVSAVGAAGFCWGGKVAVKLAS-----N-------QDVQAAVLLHPSN 173 (263)
Q Consensus 120 ~~~~~~d~~~~~~~l-~~~---~~~~i~~~G~S~Gg~~a~~~a~-----~-------~~i~~~v~~~~~~ 173 (263)
.++..+|+..+++.. ... ...++.+.|-|.||..+-.+|. . -.++++++.+|..
T Consensus 112 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 112 DDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred hhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 233334444444322 222 4559999999999999888762 1 2588999988876
No 218
>PLN00413 triacylglycerol lipase
Probab=92.35 E-value=0.18 Score=44.23 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=19.5
Q ss_pred hcCCCeEEEEEEeccHHHHHHhh
Q 024721 136 EKGVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 136 ~~~~~~i~~~G~S~Gg~~a~~~a 158 (263)
+.+..++.+.|||+||.+|..+|
T Consensus 280 ~~p~~kliVTGHSLGGALAtLaA 302 (479)
T PLN00413 280 QNPTSKFILSGHSLGGALAILFT 302 (479)
T ss_pred HCCCCeEEEEecCHHHHHHHHHH
Confidence 33556899999999999999876
No 219
>PLN02162 triacylglycerol lipase
Probab=91.85 E-value=0.2 Score=43.84 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=18.4
Q ss_pred CCCeEEEEEEeccHHHHHHhh
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a 158 (263)
+..++.+.|||+||.+|..+|
T Consensus 276 p~~kliVTGHSLGGALAtLaA 296 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFP 296 (475)
T ss_pred CCceEEEEecChHHHHHHHHH
Confidence 456899999999999999865
No 220
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=91.38 E-value=2.2 Score=37.67 Aligned_cols=106 Identities=14% Similarity=0.058 Sum_probs=57.4
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHH----h--------------CCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVA----G--------------AGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT 120 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~----~--------------~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (263)
.+|.||.+-||.|=+. ..++..++- . +--.++-.|.+-|.|.++........ .+.
T Consensus 72 ~dPlvLWLnGGPGCSS--l~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-----~~D 144 (454)
T KOG1282|consen 72 TDPLVLWLNGGPGCSS--LGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-----TGD 144 (454)
T ss_pred CCCEEEEeCCCCCccc--hhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-----CCc
Confidence 4678889999988431 112222111 0 01345566665566655543222111 111
Q ss_pred cccccc-HHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhhc----------CC--CccEEEEecC
Q 024721 121 DKGYED-AKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLAS----------NQ--DVQAAVLLHP 171 (263)
Q Consensus 121 ~~~~~d-~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a~----------~~--~i~~~v~~~~ 171 (263)
+...+| ...+.+|+.+. ..+.+.+.|-|.+|..+-.+|. .+ .+++++.-.|
T Consensus 145 ~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg 211 (454)
T KOG1282|consen 145 DGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNG 211 (454)
T ss_pred HHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCc
Confidence 222234 33444566554 4568999999999988887772 12 5677777333
No 221
>PLN02934 triacylglycerol lipase
Probab=91.29 E-value=0.26 Score=43.56 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=23.1
Q ss_pred HHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhh
Q 024721 127 AKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 127 ~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a 158 (263)
+...++.+.+. +..++.+.|||+||.+|..+|
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHH
Confidence 44444433333 455999999999999999976
No 222
>PLN02408 phospholipase A1
Probab=90.80 E-value=0.27 Score=41.85 Aligned_cols=56 Identities=11% Similarity=0.132 Sum_probs=32.5
Q ss_pred eEEEEEEeccHHHHHHhhcC-----C--CccEEEEecCCCC-Ch---hhhhcccccEEEEecCCCCC
Q 024721 141 AVGAAGFCWGGKVAVKLASN-----Q--DVQAAVLLHPSNV-TE---DEIKVVKVPIAVLGAERDNG 196 (263)
Q Consensus 141 ~i~~~G~S~Gg~~a~~~a~~-----~--~i~~~v~~~~~~~-~~---~~~~~~~~p~l~i~G~~D~~ 196 (263)
+|.+.|||+||.+|..+|.+ + ..-.++.+.+... .. +.+......++=+.-.+|.+
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~~~~~~~~~~lRVvN~~D~V 267 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRRQLEKQGTKVLRIVNSDDVI 267 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHHHHHhcCCcEEEEEeCCCCc
Confidence 69999999999999998721 1 1122344433222 11 22333345667666767754
No 223
>PLN02571 triacylglycerol lipase
Probab=90.72 E-value=0.27 Score=42.59 Aligned_cols=18 Identities=22% Similarity=0.314 Sum_probs=16.8
Q ss_pred eEEEEEEeccHHHHHHhh
Q 024721 141 AVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 141 ~i~~~G~S~Gg~~a~~~a 158 (263)
+|.++|||+||.+|...|
T Consensus 227 sI~VTGHSLGGALAtLaA 244 (413)
T PLN02571 227 SITICGHSLGAALATLNA 244 (413)
T ss_pred cEEEeccchHHHHHHHHH
Confidence 699999999999999977
No 224
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.69 E-value=2.1 Score=38.27 Aligned_cols=73 Identities=15% Similarity=0.127 Sum_probs=48.4
Q ss_pred cCCCeEEEEEEeccHHHHHHhhcC-C-CccEEEEecCCCCChhhhhcccccEEEEecCCCCCCChHHHHHHHHHH
Q 024721 137 KGVSAVGAAGFCWGGKVAVKLASN-Q-DVQAAVLLHPSNVTEDEIKVVKVPIAVLGAERDNGLPPAQMKRFDEIL 209 (263)
Q Consensus 137 ~~~~~i~~~G~S~Gg~~a~~~a~~-~-~i~~~v~~~~~~~~~~~~~~~~~p~l~i~G~~D~~~~~~~~~~~~~~l 209 (263)
+.+++-...|-|.||+-++..|+. | .+.++++-+|...-.......--+...+.......+++...+.+.++.
T Consensus 112 ~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~av 186 (474)
T PF07519_consen 112 KAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTHLQLAHAWPAQVMYPDPGGYLSPCKLDLIHAAV 186 (474)
T ss_pred CCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHHHHHHhhhhhhhhccCCCCCCCHHHHHHHHHHH
Confidence 367789999999999999999944 4 899999999987432221111123333444346666777666655543
No 225
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=90.31 E-value=1.3 Score=37.54 Aligned_cols=60 Identities=23% Similarity=0.223 Sum_probs=41.7
Q ss_pred CCCeEEEEEEeccHHHHHHhh----cC---CCccEEEEecCCC-CChhhhh----cccccEEEEecCCCCCC
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA----SN---QDVQAAVLLHPSN-VTEDEIK----VVKVPIAVLGAERDNGL 197 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a----~~---~~i~~~v~~~~~~-~~~~~~~----~~~~p~l~i~G~~D~~~ 197 (263)
+..+|.++|||+|+.+.+.+. +. ..|+.++++.... .+..... -+...+.=++.++|.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r~vVsGr~vN~YS~~D~vL 289 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIRSVVSGRLVNVYSENDWVL 289 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHHHHccCeEEEEecCcHHHH
Confidence 566899999999999999865 22 2467777775433 2333322 24678888999999753
No 226
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=90.08 E-value=2.6 Score=37.29 Aligned_cols=85 Identities=14% Similarity=0.050 Sum_probs=57.8
Q ss_pred HhCCCEEEeecCC-CCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc----CCCeEEEEEEeccHHHHHHhh-
Q 024721 85 AGAGFLVVAPDFF-HGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK----GVSAVGAAGFCWGGKVAVKLA- 158 (263)
Q Consensus 85 ~~~G~~vv~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~----~~~~i~~~G~S~Gg~~a~~~a- 158 (263)
.+.|-.|+..++| .|.+.+..+.... -++..+..+.+.|+..+|+.+..+ +..+++..|-|.-|.++.+.=
T Consensus 115 kkfgA~v~~lEHRFYG~S~P~~~~st~---nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~ 191 (514)
T KOG2182|consen 115 KKFGATVFQLEHRFYGQSSPIGDLSTS---NLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFRE 191 (514)
T ss_pred HHhCCeeEEeeeeccccCCCCCCCccc---chhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHH
Confidence 3458999999998 7865433322111 133345578889999999988765 345999999999999998854
Q ss_pred cCC-CccEEEEecCC
Q 024721 159 SNQ-DVQAAVLLHPS 172 (263)
Q Consensus 159 ~~~-~i~~~v~~~~~ 172 (263)
..| -+.+.|+.++.
T Consensus 192 ~yPel~~GsvASSap 206 (514)
T KOG2182|consen 192 KYPELTVGSVASSAP 206 (514)
T ss_pred hCchhheeecccccc
Confidence 445 45555554443
No 227
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=89.85 E-value=0.67 Score=37.87 Aligned_cols=51 Identities=18% Similarity=0.280 Sum_probs=33.8
Q ss_pred cccccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhhcCCCccEEEEecCC
Q 024721 122 KGYEDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPS 172 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~ 172 (263)
++..+....+..+++. ...+|.+.|||.||.+|..+...-.+-.+..-+|.
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP~VaFesPG 308 (425)
T COG5153 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLPVVAFESPG 308 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCceEEecCch
Confidence 3334444444444444 44599999999999999998866555555555554
No 228
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=89.85 E-value=0.67 Score=37.87 Aligned_cols=51 Identities=18% Similarity=0.280 Sum_probs=33.8
Q ss_pred cccccHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhhcCCCccEEEEecCC
Q 024721 122 KGYEDAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLASNQDVQAAVLLHPS 172 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~~~~i~~~v~~~~~ 172 (263)
++..+....+..+++. ...+|.+.|||.||.+|..+...-.+-.+..-+|.
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP~VaFesPG 308 (425)
T KOG4540|consen 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLPVVAFESPG 308 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCceEEecCch
Confidence 3334444444444444 44599999999999999998866555555555554
No 229
>PLN02324 triacylglycerol lipase
Probab=89.44 E-value=0.38 Score=41.61 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=16.9
Q ss_pred eEEEEEEeccHHHHHHhh
Q 024721 141 AVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 141 ~i~~~G~S~Gg~~a~~~a 158 (263)
+|.+.|||+||.+|...|
T Consensus 216 sItvTGHSLGGALAtLaA 233 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSA 233 (415)
T ss_pred eEEEecCcHHHHHHHHHH
Confidence 799999999999999977
No 230
>PLN02753 triacylglycerol lipase
Probab=89.36 E-value=0.23 Score=44.13 Aligned_cols=19 Identities=26% Similarity=0.455 Sum_probs=17.7
Q ss_pred CeEEEEEEeccHHHHHHhh
Q 024721 140 SAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a 158 (263)
.+|.++|||+||.+|...|
T Consensus 312 ~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 312 LSITVTGHSLGGALAILSA 330 (531)
T ss_pred ceEEEEccCHHHHHHHHHH
Confidence 4899999999999999987
No 231
>PLN02719 triacylglycerol lipase
Probab=89.20 E-value=0.4 Score=42.47 Aligned_cols=19 Identities=32% Similarity=0.461 Sum_probs=17.4
Q ss_pred CeEEEEEEeccHHHHHHhh
Q 024721 140 SAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a 158 (263)
.+|.++|||+||.+|..+|
T Consensus 298 ~sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSA 316 (518)
T ss_pred ceEEEecCcHHHHHHHHHH
Confidence 3899999999999999977
No 232
>PLN02761 lipase class 3 family protein
Probab=88.95 E-value=0.26 Score=43.73 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=17.4
Q ss_pred CeEEEEEEeccHHHHHHhh
Q 024721 140 SAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 140 ~~i~~~G~S~Gg~~a~~~a 158 (263)
.+|.++|||+||.+|...|
T Consensus 294 ~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 294 ISITVTGHSLGASLALVSA 312 (527)
T ss_pred ceEEEeccchHHHHHHHHH
Confidence 3799999999999999877
No 233
>PLN02802 triacylglycerol lipase
Probab=88.35 E-value=0.53 Score=41.72 Aligned_cols=18 Identities=22% Similarity=0.455 Sum_probs=17.0
Q ss_pred eEEEEEEeccHHHHHHhh
Q 024721 141 AVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 141 ~i~~~G~S~Gg~~a~~~a 158 (263)
.|.+.|||+||.+|..+|
T Consensus 331 sI~VTGHSLGGALAtLaA 348 (509)
T PLN02802 331 SITVTGHSLGAALALLVA 348 (509)
T ss_pred eEEEeccchHHHHHHHHH
Confidence 799999999999999977
No 234
>PF03283 PAE: Pectinacetylesterase
Probab=87.99 E-value=1.5 Score=37.65 Aligned_cols=34 Identities=24% Similarity=0.195 Sum_probs=28.6
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh
Q 024721 125 EDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 125 ~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a 158 (263)
..+.+++++|.+. +.++|.+.|.|.||.-++..+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 4588889988776 467999999999999999855
No 235
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=86.95 E-value=1.2 Score=27.57 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=14.1
Q ss_pred eEEeeCC--eeEEEeCCCC-------CCeeEEEEecccCCCc
Q 024721 42 TVTELGG--LKAYVTGPPH-------SKKAVLMISDIYGDEP 74 (263)
Q Consensus 42 ~~~~~~~--~~~~~~~~~~-------~~~~vv~~h~~~g~~~ 74 (263)
.+++.|| +..+...+++ ++|+|++.||.++++.
T Consensus 16 ~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~ 57 (63)
T PF04083_consen 16 EVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD 57 (63)
T ss_dssp EEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG
T ss_pred EEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH
Confidence 3446677 4444433322 3577888888877654
No 236
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=85.51 E-value=0.9 Score=38.59 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=23.3
Q ss_pred cHHHHHHHHHhc-CCCeEEEEEEeccHHHHHHhh
Q 024721 126 DAKPVIAALKEK-GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 126 d~~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a 158 (263)
.+.+.++.|... ..-+|.+.|||+||.+|..+|
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa 189 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAA 189 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHH
Confidence 344444433333 445899999999999999987
No 237
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=80.44 E-value=11 Score=33.66 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=27.6
Q ss_pred ccccccHHHHHHHHH----hc--CCCeEEEEEEeccHHHHHHhh
Q 024721 121 DKGYEDAKPVIAALK----EK--GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 121 ~~~~~d~~~~~~~l~----~~--~~~~i~~~G~S~Gg~~a~~~a 158 (263)
...-+|+..+.+.+. +. ..++.+++|-|.||.-+..+|
T Consensus 173 ~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A 216 (498)
T COG2939 173 EGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFA 216 (498)
T ss_pred hccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHH
Confidence 444567666665543 33 345899999999999999887
No 238
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.29 E-value=3 Score=37.71 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=26.2
Q ss_pred ccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHHhh
Q 024721 123 GYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 123 ~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~~a 158 (263)
.......+++.+.+. +..+|..+||||||.++=.+.
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHH
Confidence 344556677777665 367999999999998876643
No 239
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=80.00 E-value=16 Score=30.10 Aligned_cols=36 Identities=17% Similarity=0.080 Sum_probs=27.3
Q ss_pred ccccHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhh
Q 024721 123 GYEDAKPVIAALKEK--GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 123 ~~~d~~~~~~~l~~~--~~~~i~~~G~S~Gg~~a~~~a 158 (263)
....+..+..++.+. ..++|.++|+|-|+..|-.+|
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a 110 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFA 110 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHH
Confidence 334566666666544 556899999999999998877
No 240
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=79.61 E-value=5.3 Score=31.84 Aligned_cols=21 Identities=24% Similarity=0.264 Sum_probs=18.2
Q ss_pred CCCeEEEEEEeccHHHHHHhh
Q 024721 138 GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~~a~~~a 158 (263)
..+++.++|+|+|+.++...+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~ 66 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVL 66 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHH
Confidence 456899999999999998865
No 241
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=78.67 E-value=5.5 Score=31.58 Aligned_cols=29 Identities=14% Similarity=0.121 Sum_probs=19.8
Q ss_pred ccHHHHHHHHHhc-------CCCeEEEEEEeccHHHH
Q 024721 125 EDAKPVIAALKEK-------GVSAVGAAGFCWGGKVA 154 (263)
Q Consensus 125 ~d~~~~~~~l~~~-------~~~~i~~~G~S~Gg~~a 154 (263)
.-+++++||+... ..++++++|.| ||..+
T Consensus 107 g~LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~g 142 (219)
T TIGR02690 107 GSQKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQS 142 (219)
T ss_pred HHHHHHHHhcccCcccccccCCCcEEEEEeC-CcHhH
Confidence 3478888888653 24678899988 54443
No 242
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=78.34 E-value=2.8 Score=37.09 Aligned_cols=85 Identities=20% Similarity=0.146 Sum_probs=50.4
Q ss_pred HHHHHhC-CCEEEeecCCCCC-CCC-CCCCCcchhhhhhcCCCccccccHHHHHHHHHhc------CCCeEEEEEEeccH
Q 024721 81 ADKVAGA-GFLVVAPDFFHGD-AAN-PSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK------GVSAVGAAGFCWGG 151 (263)
Q Consensus 81 ~~~l~~~-G~~vv~~d~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~------~~~~i~~~G~S~Gg 151 (263)
++.|+.. ..+||.++||-|. |.- ....+...+ ..-.-|=.-+++|++++ ++++|.++|.|.|+
T Consensus 158 Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPG--------NmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGa 229 (601)
T KOG4389|consen 158 GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPG--------NMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGA 229 (601)
T ss_pred cceeeeeccEEEEEeeeeeccceEEecCCCCCCCC--------ccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccch
Confidence 5666765 4688888997332 211 000001000 11123556678888876 68899999999998
Q ss_pred HHHHH-hh---cCCCccEEEEecCCC
Q 024721 152 KVAVK-LA---SNQDVQAAVLLHPSN 173 (263)
Q Consensus 152 ~~a~~-~a---~~~~i~~~v~~~~~~ 173 (263)
..+.. +. +++-++..|+-+|+.
T Consensus 230 ASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 230 ASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred hhhhheecCCCchhhHHHHHhhcCCC
Confidence 87665 33 334566666666554
No 243
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=76.57 E-value=6.1 Score=30.32 Aligned_cols=61 Identities=20% Similarity=0.315 Sum_probs=45.5
Q ss_pred hhHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc--CCCeEEEEEEeccHH
Q 024721 76 IYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK--GVSAVGAAGFCWGGK 152 (263)
Q Consensus 76 ~~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~i~~~G~S~Gg~ 152 (263)
..+.+.+.+.+. |+.+++|.|.++-+ .-+++++||+... ..+++.+++.|.|+.
T Consensus 57 ~v~~~~~~i~~aD~li~~tPeYn~s~p-----------------------g~lKnaiD~l~~~~~~~Kpv~~~~~s~g~~ 113 (184)
T COG0431 57 AVQALREAIAAADGLIIATPEYNGSYP-----------------------GALKNAIDWLSREALGGKPVLLLGTSGGGA 113 (184)
T ss_pred HHHHHHHHHHhCCEEEEECCccCCCCC-----------------------HHHHHHHHhCCHhHhCCCcEEEEecCCCch
Confidence 456677777765 89999999943332 5788889988665 456889999999988
Q ss_pred HHHHhhc
Q 024721 153 VAVKLAS 159 (263)
Q Consensus 153 ~a~~~a~ 159 (263)
-++....
T Consensus 114 ~~~~a~~ 120 (184)
T COG0431 114 GGLRAQN 120 (184)
T ss_pred hHHHHHH
Confidence 8887653
No 244
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=74.15 E-value=12 Score=33.41 Aligned_cols=65 Identities=11% Similarity=-0.045 Sum_probs=45.1
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcC----------------CC---------C-----ceeEEEcCCCCcccccc
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAK----------------PK---------F-----DHLVKTYPGVCHGWTVR 232 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~----------------~~---------~-----~~~~~~~~g~~H~~~~~ 232 (263)
..+||+..|+.|-+++....+++.+.|... .+ . +..+..+.++||....
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~- 442 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPM- 442 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChh-
Confidence 579999999999999998888888887411 00 0 2334445567775533
Q ss_pred CCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 233 YFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
+..+.+.+.+..|++.
T Consensus 443 ---------d~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 443 ---------DQPAVALTMINRFLRN 458 (462)
T ss_pred ---------hHHHHHHHHHHHHHcC
Confidence 4467888888888863
No 245
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=74.11 E-value=3 Score=29.87 Aligned_cols=41 Identities=22% Similarity=0.322 Sum_probs=26.4
Q ss_pred CeeEEEeCCCCCCeeEEEEecccCCCchhh-HHHHHHHHhCC
Q 024721 48 GLKAYVTGPPHSKKAVLMISDIYGDEPPIY-RSVADKVAGAG 88 (263)
Q Consensus 48 ~~~~~~~~~~~~~~~vv~~h~~~g~~~~~~-~~~~~~l~~~G 88 (263)
.++.++..+...+|.|+-+||+.|...++. +-+|+.|-..|
T Consensus 40 ai~~~l~~~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 40 AIKGHLANPNPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred HHHHHHcCCCCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 366777666556777888898888654433 33566655555
No 246
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=71.12 E-value=13 Score=26.01 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=16.1
Q ss_pred EEeeCCeeEEEe--CCCCC-CeeEEEEecccCCCc
Q 024721 43 VTELGGLKAYVT--GPPHS-KKAVLMISDIYGDEP 74 (263)
Q Consensus 43 ~~~~~~~~~~~~--~~~~~-~~~vv~~h~~~g~~~ 74 (263)
.++++|+.+... .++++ ..|||++||+.|+-.
T Consensus 72 ~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~ 106 (112)
T PF06441_consen 72 KTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFL 106 (112)
T ss_dssp EEEETTEEEEEEEE--S-TT-EEEEEE--SS--GG
T ss_pred eEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHH
Confidence 446788665554 33333 358999999998754
No 247
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=69.16 E-value=16 Score=30.77 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=45.5
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCC--------------------CCceeEEEcCCCCccccccCCCCChhhhh
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKP--------------------KFDHLVKTYPGVCHGWTVRYFVNDTFAVN 242 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~~~~g~~H~~~~~~~~~~~~~~~ 242 (263)
..++|+..|+.|-+++.-..+.+.+.|.... +....+.++-++||... ..
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~--~q-------- 302 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE--YR-------- 302 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC--cC--------
Confidence 4799999999999999999999999985211 01144455557888662 22
Q ss_pred HHHHHHHHHHHHHHH
Q 024721 243 SAAEAHEDMINWFEK 257 (263)
Q Consensus 243 ~~~~~~~~~~~fl~~ 257 (263)
.+.+.+.+..|++.
T Consensus 303 -P~~al~m~~~fi~~ 316 (319)
T PLN02213 303 -PNETFIMFQRWISG 316 (319)
T ss_pred -HHHHHHHHHHHHcC
Confidence 36777788888763
No 248
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=68.00 E-value=3.7 Score=34.08 Aligned_cols=44 Identities=20% Similarity=0.226 Sum_probs=29.3
Q ss_pred CeeEEEeCCCCCCeeEEEEecccCCCchhh-HHHHHHHHhCCCEE
Q 024721 48 GLKAYVTGPPHSKKAVLMISDIYGDEPPIY-RSVADKVAGAGFLV 91 (263)
Q Consensus 48 ~~~~~~~~~~~~~~~vv~~h~~~g~~~~~~-~~~~~~l~~~G~~v 91 (263)
.++.|+..|...+|.+|=+||+.|...++. +-+++.+-+.|-.-
T Consensus 97 alk~~~~n~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl~S 141 (344)
T KOG2170|consen 97 ALKSHWANPNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGLRS 141 (344)
T ss_pred HHHHHhcCCCCCCCeEEEecCCCCCchhHHHHHHHHHHHhccccc
Confidence 377888877777788888999988765443 23455555556433
No 249
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=66.97 E-value=8.3 Score=32.49 Aligned_cols=79 Identities=16% Similarity=0.144 Sum_probs=47.7
Q ss_pred EEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHH-HHHhc---CCCeEEEEEEeccHHHHHHhhc-----C
Q 024721 90 LVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIA-ALKEK---GVSAVGAAGFCWGGKVAVKLAS-----N 160 (263)
Q Consensus 90 ~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~l~~~---~~~~i~~~G~S~Gg~~a~~~a~-----~ 160 (263)
.++-+|.+-|.|.+........ .+.+..++|+..+++ ++... ..+++++.|-|.||..+-.+|. +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~------~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n 76 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDK------TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGN 76 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCc------cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhc
Confidence 5788898767777654321110 011122245444443 33222 3568999999999998888772 1
Q ss_pred -----C--CccEEEEecCCCC
Q 024721 161 -----Q--DVQAAVLLHPSNV 174 (263)
Q Consensus 161 -----~--~i~~~v~~~~~~~ 174 (263)
+ .+++++.-.|+..
T Consensus 77 ~~~~~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 77 YICCEPPINLQGYMLGNPVTY 97 (319)
T ss_pred ccccCCceeeeEEEeCCCCCC
Confidence 1 6788888887653
No 250
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=66.88 E-value=60 Score=32.83 Aligned_cols=46 Identities=24% Similarity=0.329 Sum_probs=32.6
Q ss_pred HHHHHHHHhc-CCCeEEEEEEeccHHHHHHhhc----CCCccEEEEecCCC
Q 024721 128 KPVIAALKEK-GVSAVGAAGFCWGGKVAVKLAS----NQDVQAAVLLHPSN 173 (263)
Q Consensus 128 ~~~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~----~~~i~~~v~~~~~~ 173 (263)
...++.+++. ...+.-++|+|+|+.++..+|. ......++++.|+.
T Consensus 2169 ~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2169 AYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred HHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 3344556554 4458999999999999999882 23445588877765
No 251
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=63.89 E-value=21 Score=31.64 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=45.9
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCC--------------------CCceeEEEcCCCCccccccCCCCChhhhh
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKP--------------------KFDHLVKTYPGVCHGWTVRYFVNDTFAVN 242 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~~~~g~~H~~~~~~~~~~~~~~~ 242 (263)
..++|+..|+.|-+++.-..+.+.+.|.-.. +....+.++-+|||... ..
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp--~q-------- 416 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE--YR-------- 416 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC--CC--------
Confidence 4799999999999999999999998885211 11144555667888662 22
Q ss_pred HHHHHHHHHHHHHHH
Q 024721 243 SAAEAHEDMINWFEK 257 (263)
Q Consensus 243 ~~~~~~~~~~~fl~~ 257 (263)
.+.+.+.+..|++.
T Consensus 417 -P~~al~m~~~Fi~~ 430 (433)
T PLN03016 417 -PNETFIMFQRWISG 430 (433)
T ss_pred -HHHHHHHHHHHHcC
Confidence 46778888888863
No 252
>PLN02209 serine carboxypeptidase
Probab=62.45 E-value=22 Score=31.45 Aligned_cols=63 Identities=14% Similarity=0.154 Sum_probs=45.0
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCC--------------C-----Cc-eeEEEcCCCCccccccCCCCChhhhh
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKP--------------K-----FD-HLVKTYPGVCHGWTVRYFVNDTFAVN 242 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~--------------~-----~~-~~~~~~~g~~H~~~~~~~~~~~~~~~ 242 (263)
..++|+..|+.|-+++.-..+.+.+.|.... | .+ ..+..+-+|||.. . ..
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV-p-~q-------- 420 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA-E-YL-------- 420 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc-C-cC--------
Confidence 3689999999999999999999999885111 0 11 4455566788866 2 22
Q ss_pred HHHHHHHHHHHHHH
Q 024721 243 SAAEAHEDMINWFE 256 (263)
Q Consensus 243 ~~~~~~~~~~~fl~ 256 (263)
.+++.+.+..|++
T Consensus 421 -P~~al~m~~~fi~ 433 (437)
T PLN02209 421 -PEESSIMFQRWIS 433 (437)
T ss_pred -HHHHHHHHHHHHc
Confidence 4677788888875
No 253
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=59.66 E-value=11 Score=32.76 Aligned_cols=64 Identities=11% Similarity=0.007 Sum_probs=41.5
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCC---------------------CCceeEEEcCCCCccccccCCCCChhhh
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKP---------------------KFDHLVKTYPGVCHGWTVRYFVNDTFAV 241 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~g~~H~~~~~~~~~~~~~~ 241 (263)
..++|+.+|..|-+++.-..+.+.+.|.... -.+..+..+.++||....
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~---------- 399 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ---------- 399 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH----------
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh----------
Confidence 4899999999999999999999999884110 012345667788886643
Q ss_pred hHHHHHHHHHHHHHH
Q 024721 242 NSAAEAHEDMINWFE 256 (263)
Q Consensus 242 ~~~~~~~~~~~~fl~ 256 (263)
+..+.+.+.+..||+
T Consensus 400 dqP~~a~~m~~~fl~ 414 (415)
T PF00450_consen 400 DQPEAALQMFRRFLK 414 (415)
T ss_dssp HSHHHHHHHHHHHHC
T ss_pred hCHHHHHHHHHHHhc
Confidence 235677777777774
No 254
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=57.53 E-value=15 Score=29.12 Aligned_cols=34 Identities=15% Similarity=0.345 Sum_probs=25.9
Q ss_pred eEEEEecccCCCchhhHHHHHHHHhCCCEEEeec
Q 024721 62 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPD 95 (263)
Q Consensus 62 ~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d 95 (263)
.||++|............+.+.|.++||.++.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 5889997544333466778899999999999875
No 255
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=57.51 E-value=87 Score=24.83 Aligned_cols=60 Identities=17% Similarity=0.273 Sum_probs=33.4
Q ss_pred CeeEEEEecccCCC-chhhHHHHHHHHhCCC-EEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 60 KKAVLMISDIYGDE-PPIYRSVADKVAGAGF-LVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 60 ~~~vv~~h~~~g~~-~~~~~~~~~~l~~~G~-~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
...+|++.||.... ...|.-+-..|-+.|| .|++... -|- .++..+++++++.
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v-e~y------------------------P~~d~vi~~l~~~ 191 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV-EGY------------------------PLVDTVIEYLRKN 191 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe-cCC------------------------CcHHHHHHHHHHc
Confidence 34555555554432 2344444445666788 4444433 111 4788899999887
Q ss_pred CCCeEEE
Q 024721 138 GVSAVGA 144 (263)
Q Consensus 138 ~~~~i~~ 144 (263)
+...+.+
T Consensus 192 ~~~~v~L 198 (265)
T COG4822 192 GIKEVHL 198 (265)
T ss_pred CCceEEE
Confidence 6554333
No 256
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=56.02 E-value=25 Score=32.30 Aligned_cols=75 Identities=12% Similarity=-0.047 Sum_probs=42.6
Q ss_pred cccEEEEecCCCCCCChHHHHH-HHHHHHcCCC--CceeEEEcCCCCccccccCCCCChh----hhhHHHHHHHHHHHHH
Q 024721 183 KVPIAVLGAERDNGLPPAQMKR-FDEILYAKPK--FDHLVKTYPGVCHGWTVRYFVNDTF----AVNSAAEAHEDMINWF 255 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~-~~~~l~~~~~--~~~~~~~~~g~~H~~~~~~~~~~~~----~~~~~~~~~~~~~~fl 255 (263)
..|.+++||..|.++|.....+ ++...+...+ ...++.++.++.|.=..-..+.+.. .-....++.+.|-+||
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L 634 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMWAHL 634 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHHHHh
Confidence 5799999999999999755444 3333322223 3577888888777322211111100 0123456666666666
Q ss_pred HH
Q 024721 256 EK 257 (263)
Q Consensus 256 ~~ 257 (263)
+.
T Consensus 635 ~~ 636 (690)
T PF10605_consen 635 KS 636 (690)
T ss_pred hc
Confidence 53
No 257
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=54.60 E-value=6.9 Score=17.43 Aligned_cols=11 Identities=36% Similarity=0.788 Sum_probs=6.0
Q ss_pred ChhHHHHHHHH
Q 024721 1 MMELILLTSLL 11 (263)
Q Consensus 1 ~~~~~~~~~l~ 11 (263)
||++++....+
T Consensus 1 MMk~vIIlvvL 11 (19)
T PF13956_consen 1 MMKLVIILVVL 11 (19)
T ss_pred CceehHHHHHH
Confidence 67776553333
No 258
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=53.15 E-value=22 Score=29.97 Aligned_cols=34 Identities=24% Similarity=0.153 Sum_probs=27.0
Q ss_pred ccHHHHHHHHHhc--CCCeEEEEEEeccHHHHHHhh
Q 024721 125 EDAKPVIAALKEK--GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 125 ~d~~~~~~~l~~~--~~~~i~~~G~S~Gg~~a~~~a 158 (263)
+.+..+..+|-+. ..++|.+.|+|-|+.++-.+|
T Consensus 105 ~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVla 140 (423)
T COG3673 105 QNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLA 140 (423)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHH
Confidence 4566666776655 567999999999999998776
No 259
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=52.15 E-value=27 Score=31.09 Aligned_cols=64 Identities=11% Similarity=0.038 Sum_probs=43.5
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHHHcCCCCc--------------------eeEEEcCCCCccccccCCCCChhhhhH
Q 024721 184 VPIAVLGAERDNGLPPAQMKRFDEILYAKPKFD--------------------HLVKTYPGVCHGWTVRYFVNDTFAVNS 243 (263)
Q Consensus 184 ~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~--------------------~~~~~~~g~~H~~~~~~~~~~~~~~~~ 243 (263)
.++|+..|+.|-++|.-..+.+.+.|......+ ..+..+.|+||..... .
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~----------~ 433 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYD----------K 433 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCC----------C
Confidence 699999999999999988888877774111100 2234556889955332 1
Q ss_pred HHHHHHHHHHHHHH
Q 024721 244 AAEAHEDMINWFEK 257 (263)
Q Consensus 244 ~~~~~~~~~~fl~~ 257 (263)
.+.+...+..||..
T Consensus 434 p~~al~m~~~fl~g 447 (454)
T KOG1282|consen 434 PESALIMFQRFLNG 447 (454)
T ss_pred cHHHHHHHHHHHcC
Confidence 35677788888874
No 260
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.02 E-value=14 Score=32.99 Aligned_cols=43 Identities=21% Similarity=0.345 Sum_probs=29.3
Q ss_pred HHHHHHHHh--cCCCeEEEEEEeccHHHHHHhh----cC---CCccEEEEec
Q 024721 128 KPVIAALKE--KGVSAVGAAGFCWGGKVAVKLA----SN---QDVQAAVLLH 170 (263)
Q Consensus 128 ~~~~~~l~~--~~~~~i~~~G~S~Gg~~a~~~a----~~---~~i~~~v~~~ 170 (263)
..+.+.|.. ++..+|.++|+|.|+.+.+.+. .. .-|.-++++.
T Consensus 433 ~lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~G 484 (633)
T KOG2385|consen 433 ELLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFG 484 (633)
T ss_pred HHHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeecc
Confidence 334444443 3788999999999999988643 22 2566677665
No 261
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=49.95 E-value=20 Score=29.61 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=23.3
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhh
Q 024721 129 PVIAALKEKGVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 129 ~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a 158 (263)
++.+.+.+.+..+-.++|||+|-..++.++
T Consensus 71 a~~~~l~~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 71 ALARLWRSWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHHHHHHHcCCcccEEEecCHHHHHHHHHh
Confidence 344556666777889999999999988776
No 262
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=48.18 E-value=14 Score=31.09 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=23.5
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhh
Q 024721 129 PVIAALKEKGVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 129 ~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a 158 (263)
++.+.+++.+..+-+++|||+|=..++.++
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhhcccccccceeeccchhhHHHHHHC
Confidence 344556666778889999999998888765
No 263
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=47.91 E-value=23 Score=26.65 Aligned_cols=33 Identities=39% Similarity=0.295 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN 160 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~ 160 (263)
..+++.+.+++...-.+.|-|.|+.++..++..
T Consensus 14 ~Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 14 VGVAKALRERGPLIDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcC
Confidence 356677777777777899999999999998843
No 264
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=47.89 E-value=22 Score=29.43 Aligned_cols=29 Identities=24% Similarity=0.161 Sum_probs=22.5
Q ss_pred HHHHHHhcCCCeEEEEEEeccHHHHHHhh
Q 024721 130 VIAALKEKGVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 130 ~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a 158 (263)
+.+.+++.+..+-.++|||+|=..++.++
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHh
Confidence 34445555778899999999998888766
No 265
>PRK10279 hypothetical protein; Provisional
Probab=47.00 E-value=23 Score=29.59 Aligned_cols=32 Identities=34% Similarity=0.333 Sum_probs=26.9
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
.-+++.+.+.+...-.++|-|+|+.++..+|.
T Consensus 21 iGVL~aL~E~gi~~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 21 IGVINALKKVGIEIDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHHHHcCCCcCEEEEEcHHHHHHHHHHc
Confidence 45777888877778899999999999998874
No 266
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=45.81 E-value=23 Score=27.19 Aligned_cols=34 Identities=9% Similarity=0.216 Sum_probs=23.6
Q ss_pred eEEEEecccC--CCchhhHHHHHHHHhCCCEEEeec
Q 024721 62 AVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPD 95 (263)
Q Consensus 62 ~vv~~h~~~g--~~~~~~~~~~~~l~~~G~~vv~~d 95 (263)
.||++|.+.. ........+.+.|.++||..+.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 4899995322 112355677888889999999874
No 267
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=45.63 E-value=1.4e+02 Score=23.07 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=27.7
Q ss_pred CCeeEEEEecccCCCchhh-HHHHHHHHhCCCEEEeecC
Q 024721 59 SKKAVLMISDIYGDEPPIY-RSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~-~~~~~~l~~~G~~vv~~d~ 96 (263)
.++.+|++-|..|...... ..+.+.|.+.|+.+.+.|-
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 3466888888877554433 4456678888999999985
No 268
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=45.43 E-value=26 Score=26.77 Aligned_cols=32 Identities=31% Similarity=0.285 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
..+++.+.+.+...=.++|-|.||.++..++.
T Consensus 15 ~Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~ 46 (194)
T cd07207 15 IGALKALEEAGILKKRVAGTSAGAITAALLAL 46 (194)
T ss_pred HHHHHHHHHcCCCcceEEEECHHHHHHHHHHc
Confidence 35667777766666789999999999999885
No 269
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=44.33 E-value=27 Score=29.28 Aligned_cols=32 Identities=28% Similarity=0.306 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
..+++.+.+++...=.++|-|+|+.++..++.
T Consensus 31 iGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~ 62 (306)
T cd07225 31 IGVIKALEEAGIPVDMVGGTSIGAFIGALYAE 62 (306)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 45677888877777789999999999999874
No 270
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=44.25 E-value=56 Score=25.82 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=27.1
Q ss_pred CeeEEEEecccCCCch--hhHHHHHHHHhCCCEEEeecC
Q 024721 60 KKAVLMISDIYGDEPP--IYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~--~~~~~~~~l~~~G~~vv~~d~ 96 (263)
.+.|.++.-..+.+.. +.....+.|.+.|+.+.-.+.
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 4567888766665432 556777889999999988876
No 271
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=43.95 E-value=31 Score=27.31 Aligned_cols=31 Identities=32% Similarity=0.323 Sum_probs=24.5
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 129 PVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 129 ~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
.+++.+.+.+.+.-.++|-|.|+.++..+|.
T Consensus 17 GvL~aL~e~gi~~~~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 17 GFLAALLEMGLEPSAISGTSAGALVGGLFAS 47 (221)
T ss_pred HHHHHHHHcCCCceEEEEeCHHHHHHHHHHc
Confidence 4566666666666679999999999999884
No 272
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=43.00 E-value=1.7e+02 Score=23.44 Aligned_cols=37 Identities=16% Similarity=0.061 Sum_probs=25.2
Q ss_pred CeeEEEEecccC--CCchhhHHHHHHHHhCCCEEEeecC
Q 024721 60 KKAVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 60 ~~~vv~~h~~~g--~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+|.|+++.-... ....+...+-+.|.+.|+.+..++.
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~ 69 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHR 69 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEecc
Confidence 455788776552 3333556677788888999888876
No 273
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=42.78 E-value=45 Score=28.99 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=47.9
Q ss_pred eeEEEEecccCCCchhh---HHHHHHHHhC-CCEEEeecCCC-----------CCCCCCCCCCcchhhhhhcCCCccccc
Q 024721 61 KAVLMISDIYGDEPPIY---RSVADKVAGA-GFLVVAPDFFH-----------GDAANPSNPKYDKDTWRKNHTTDKGYE 125 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~---~~~~~~l~~~-G~~vv~~d~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (263)
+-||.+....-+...++ ..+.+.|.+. ||.+++++.-. |.+..+...-..+..|..+ ..
T Consensus 45 ~RiV~LGE~sHGt~e~~~~k~rm~r~Lvee~Gf~~iA~EA~~~d~~av~~Yv~~~~~d~~~~~~~~~~~~Wr------~~ 118 (405)
T COG2312 45 ARIVLLGEPSHGTGEFFAFKARMFRALVEELGFRAIAFEADFPDAQAVNRYVRGGGDDLREAMDGFIFWVWR------RA 118 (405)
T ss_pred CeEEEecCCCCCccHHHHHHHHHHHHHHHHhCcceEEeccCcHHHHHHHHHHhccCCChHHHHhccchhhhh------HH
Confidence 45777764332222333 3456777775 99999997521 1111111100111112111 15
Q ss_pred cHHHHHHHHHhcC-----CCeEEEEEE---eccHHHHHHhh
Q 024721 126 DAKPVIAALKEKG-----VSAVGAAGF---CWGGKVAVKLA 158 (263)
Q Consensus 126 d~~~~~~~l~~~~-----~~~i~~~G~---S~Gg~~a~~~a 158 (263)
++..+++|+++.+ ...+.+.|+ +.+|.++...+
T Consensus 119 ~v~~lv~wlr~~na~r~~~~~~~f~g~D~~~~n~~~~~~~~ 159 (405)
T COG2312 119 EVRDLVEWLREFNAARSAGPQVGFYGFDAQMENGSAAALRA 159 (405)
T ss_pred HHHHHHHHHHHHhccCCcccccceeeccccccccchHHHHh
Confidence 8899999998762 346777776 44555554433
No 274
>KOG4530 consensus Predicted flavoprotein [General function prediction only]
Probab=42.56 E-value=70 Score=23.95 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=24.9
Q ss_pred hHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc
Q 024721 77 YRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK 137 (263)
Q Consensus 77 ~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 137 (263)
.+.+.+..++. ++..++|.|..|-+ .-+++++|++...
T Consensus 77 t~aw~~ki~~aD~ivFvtPqYN~gyp-----------------------A~LKNAlD~lyhe 115 (199)
T KOG4530|consen 77 TEAWRQKILEADSIVFVTPQYNFGYP-----------------------APLKNALDWLYHE 115 (199)
T ss_pred HHHHHHHHhhcceEEEecccccCCCc-----------------------hHHHHHHHHhhhh
Confidence 34455555554 78888998854432 5677888888655
No 275
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=41.35 E-value=44 Score=21.62 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=25.5
Q ss_pred ccHHHHHHHHHhc----CCCeEEEEEEeccHHHHHHhh
Q 024721 125 EDAKPVIAALKEK----GVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 125 ~d~~~~~~~l~~~----~~~~i~~~G~S~Gg~~a~~~a 158 (263)
..+...++++++. +++++-++|-|-|=.++.+++
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa 58 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIA 58 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHH
Confidence 5677788888774 578999999999988887654
No 276
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=41.22 E-value=40 Score=25.34 Aligned_cols=32 Identities=28% Similarity=0.286 Sum_probs=25.1
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
..+++.|.+++...=.++|-|.|+.++..++.
T Consensus 16 ~Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~ 47 (175)
T cd07205 16 IGVLKALEEAGIPIDIVSGTSAGAIVGALYAA 47 (175)
T ss_pred HHHHHHHHHcCCCeeEEEEECHHHHHHHHHHc
Confidence 45666776666556689999999999999884
No 277
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=40.43 E-value=35 Score=28.02 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN 160 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~ 160 (263)
..+++.+.+.+...=.+.|-|+|+.++..+|..
T Consensus 26 iGVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 26 IGILQALEEAGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHHcCCCccEEEEECHHHHHHHHHHcC
Confidence 356777777777667899999999999998853
No 278
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=40.09 E-value=43 Score=25.24 Aligned_cols=33 Identities=30% Similarity=0.310 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhcC
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLASN 160 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~ 160 (263)
..+++.+.+++...=.++|-|.|+..+..++..
T Consensus 16 ~Gvl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 16 IGVLRALEEEGIEIDIIAGSSIGALVGALYAAG 48 (175)
T ss_pred HHHHHHHHHCCCCeeEEEEeCHHHHHHHHHHcC
Confidence 345666776666667899999999999998743
No 279
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=39.30 E-value=34 Score=28.04 Aligned_cols=28 Identities=36% Similarity=0.332 Sum_probs=21.2
Q ss_pred HHHHHhcC-CCeEEEEEEeccHHHHHHhh
Q 024721 131 IAALKEKG-VSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 131 ~~~l~~~~-~~~i~~~G~S~Gg~~a~~~a 158 (263)
.+.+.+.+ ..+-.++|||+|=..++.++
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHh
Confidence 34444445 77889999999998888766
No 280
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=38.00 E-value=1.2e+02 Score=20.08 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=14.1
Q ss_pred ccHHHHHHHHHhcCCCeEEEE
Q 024721 125 EDAKPVIAALKEKGVSAVGAA 145 (263)
Q Consensus 125 ~d~~~~~~~l~~~~~~~i~~~ 145 (263)
.++..+++.+.+.+.++|.++
T Consensus 45 P~i~~~l~~l~~~g~~~vvvv 65 (101)
T cd03409 45 PDTEEAIRELAEEGYQRVVIV 65 (101)
T ss_pred CCHHHHHHHHHHcCCCeEEEE
Confidence 356677777777676666654
No 281
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.47 E-value=40 Score=26.48 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhhcCC
Q 024721 129 PVIAALKEKGVSAVGAAGFCWGGKVAVKLASNQ 161 (263)
Q Consensus 129 ~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~~~ 161 (263)
.+++.+.+.+...=.+.|.|.|+..+..++...
T Consensus 15 Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 15 GVLKALAEAGIEPDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 466677777666668999999999999988543
No 282
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=37.42 E-value=37 Score=23.94 Aligned_cols=22 Identities=36% Similarity=0.548 Sum_probs=19.6
Q ss_pred hhHHHHHHHHhCCCEEEeecCC
Q 024721 76 IYRSVADKVAGAGFLVVAPDFF 97 (263)
Q Consensus 76 ~~~~~~~~l~~~G~~vv~~d~~ 97 (263)
++...+++|+++||.|++.|--
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 5678999999999999999983
No 283
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=37.13 E-value=25 Score=30.72 Aligned_cols=67 Identities=12% Similarity=0.168 Sum_probs=35.6
Q ss_pred ccccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 182 VKVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 182 ~~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
-..|++++.|.-|.+-+ +....+.+.+.. .|...-.+..||.|+.......+ ..+..++.+++||.+
T Consensus 188 ~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~-rGiA~LtvDmPG~G~s~~~~l~~-------D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQE-DLYRLFRDYLAP-RGIAMLTVDMPGQGESPKWPLTQ-------DSSRLHQAVLDYLAS 254 (411)
T ss_dssp S-EEEEEEE--TTS-GG-GGHHHHHCCCHH-CT-EEEEE--TTSGGGTTT-S-S--------CCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCcchhHH-HHHHHHHHHHHh-CCCEEEEEccCCCcccccCCCCc-------CHHHHHHHHHHHHhc
Confidence 36699999999998643 223333343422 45456666788888764322222 124688899999975
No 284
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=36.79 E-value=45 Score=25.22 Aligned_cols=22 Identities=27% Similarity=0.289 Sum_probs=17.9
Q ss_pred hhhHHHHHHHHhCCCEEEeecC
Q 024721 75 PIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
..-..++..|+++|+.|+.+|.
T Consensus 14 t~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 14 TIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEE
T ss_pred HHHHHHHhcccccccccccccc
Confidence 3456789999999999999998
No 285
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=36.42 E-value=62 Score=26.25 Aligned_cols=39 Identities=10% Similarity=0.097 Sum_probs=25.0
Q ss_pred CCCeeEEEEecccCCCchhhHHHHHHHHhCCCE-EEeecC
Q 024721 58 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFL-VVAPDF 96 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~-vv~~d~ 96 (263)
++.+.|+++.-..+....+.....+.|.+.|+. |..++.
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i 65 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDV 65 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEec
Confidence 445668888766554334456677788888984 555555
No 286
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=35.96 E-value=29 Score=25.74 Aligned_cols=33 Identities=3% Similarity=0.082 Sum_probs=22.7
Q ss_pred eEEEEecccCCCchhhHHHHHHHHhCCCEEEeecC
Q 024721 62 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 62 ~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
..+.+..-.. +++-..+.+.|..+||.|+..+-
T Consensus 53 Tt~~l~q~~~--D~Fg~aL~~aLR~~GYaV~e~~~ 85 (151)
T PRK13883 53 TRFELQQPTP--DAFGQALVKALRDKGYALLEYNP 85 (151)
T ss_pred eEEEEecCCC--cHHHHHHHHHHHHcCeEEEecCC
Confidence 3555554222 24667788899999999998765
No 287
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=35.71 E-value=40 Score=28.14 Aligned_cols=31 Identities=35% Similarity=0.355 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 129 PVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 129 ~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
.+++.|.+.+...-.+.|-|+|+.++..+|.
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHc
Confidence 5677777778888899999999999999884
No 288
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=35.23 E-value=45 Score=26.66 Aligned_cols=33 Identities=33% Similarity=0.247 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCCC--eEEEEEEeccHHHHHHhhcC
Q 024721 128 KPVIAALKEKGVS--AVGAAGFCWGGKVAVKLASN 160 (263)
Q Consensus 128 ~~~~~~l~~~~~~--~i~~~G~S~Gg~~a~~~a~~ 160 (263)
..+++.+.+++.. .-.+.|-|.|+..+..++..
T Consensus 15 ~GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 15 LGVLSLLIEAGVINETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred HHHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcC
Confidence 3567777777643 44799999999999998853
No 289
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=35.01 E-value=68 Score=20.56 Aligned_cols=22 Identities=23% Similarity=0.218 Sum_probs=17.6
Q ss_pred chhhHHHHHHHHhCCCEEEeec
Q 024721 74 PPIYRSVADKVAGAGFLVVAPD 95 (263)
Q Consensus 74 ~~~~~~~~~~l~~~G~~vv~~d 95 (263)
...-..++..|++.|+.|+..|
T Consensus 13 tt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 13 TTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHHHHCCCeEEEEC
Confidence 3455778889988899998887
No 290
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=33.73 E-value=57 Score=26.97 Aligned_cols=87 Identities=15% Similarity=0.103 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHH----hc---CCCeEEEEEE
Q 024721 75 PIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK----EK---GVSAVGAAGF 147 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~----~~---~~~~i~~~G~ 147 (263)
+.-..-.+++..-..+++++.|- --++. -.+.. +.+...+-..++++.+. +. .-.++.+.|-
T Consensus 48 p~a~~a~E~l~~GD~A~va~QYS-ylPSw--------~sfl~--dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~Ge 116 (289)
T PF10081_consen 48 PWAVDALEYLYGGDVAIVAMQYS-YLPSW--------LSFLV--DRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGE 116 (289)
T ss_pred HHHHhHHHHHhCCCeEEEEeccc-cccch--------HHHhc--ccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEecc
Confidence 34444556666545778888772 11110 00111 11222233444444443 33 2348999999
Q ss_pred eccHHHHHHhhc-----CCCccEEEEecCC
Q 024721 148 CWGGKVAVKLAS-----NQDVQAAVLLHPS 172 (263)
Q Consensus 148 S~Gg~~a~~~a~-----~~~i~~~v~~~~~ 172 (263)
|+|+.-+...-. ..++.+++...+.
T Consensus 117 SLGa~g~~~af~~~~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 117 SLGAYGGEAAFDGLDDLRDRVDGALWVGPP 146 (289)
T ss_pred CccccchhhhhccHHHhhhhcceEEEeCCC
Confidence 999887766431 1366666665543
No 291
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=33.63 E-value=99 Score=28.18 Aligned_cols=68 Identities=13% Similarity=0.011 Sum_probs=45.8
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHHHhhhCC
Q 024721 185 PIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEKHVKCDK 263 (263)
Q Consensus 185 p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 263 (263)
...+-+|++|++.-.+.+..+.+.|.-+...++.++... |--|+.... .......+++-|++++-+|+
T Consensus 21 D~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlG--GDLFHeNkP---------Sr~~L~~~i~lLRryClgdk 88 (646)
T KOG2310|consen 21 DNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLG--GDLFHENKP---------SRKTLHRCLELLRRYCLGDK 88 (646)
T ss_pred cCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEec--CcccccCCc---------cHHHHHHHHHHHHHHccCCC
Confidence 445667999999876666666666543344478888884 555654322 35777788888998887764
No 292
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=33.46 E-value=1.6e+02 Score=27.87 Aligned_cols=37 Identities=19% Similarity=0.192 Sum_probs=26.2
Q ss_pred CeeEEEEecccCC---------CchhhHHHHHHHHhCCCEEEeecC
Q 024721 60 KKAVLMISDIYGD---------EPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 60 ~~~vv~~h~~~g~---------~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+.+||+.|+.... +...+....+.|.++||.++.++-
T Consensus 48 ~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~e 93 (672)
T PRK14581 48 TFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQ 93 (672)
T ss_pred ceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHH
Confidence 3567777765422 123567788899999999999975
No 293
>COG3233 Predicted deacetylase [General function prediction only]
Probab=33.46 E-value=2.5e+02 Score=22.41 Aligned_cols=36 Identities=17% Similarity=0.289 Sum_probs=22.4
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCC---CEE--EeecC
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAG---FLV--VAPDF 96 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G---~~v--v~~d~ 96 (263)
+.++++|...+..++.+..+.+.+.+.| -.+ |.|++
T Consensus 4 ~~iillhdVSpv~~~~~~~i~~~ide~~~~~~t~lLViPn~ 44 (233)
T COG3233 4 PLIILLHDVSPVYWPTLSNIDAAIDEYGAQNSTVLLVIPNH 44 (233)
T ss_pred cceEEEEecCcccchhHHHHHHHHHHhCCCCceEEEEeecc
Confidence 3678888887766666666555555443 333 56676
No 294
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=33.06 E-value=79 Score=27.54 Aligned_cols=35 Identities=17% Similarity=-0.037 Sum_probs=24.4
Q ss_pred eeEEEEe---cccCCCchhhHHHHHHHHhCCCEEEeecC
Q 024721 61 KAVLMIS---DIYGDEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 61 ~~vv~~h---~~~g~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+.||.+. ||-|- +..-..++..|+.+||.|+++|.
T Consensus 106 ~~vIav~n~KGGVGK-TTta~nLA~~LA~~G~rVLlIDl 143 (387)
T PHA02519 106 PVVLAVMSHKGGVYK-TSSAVHTAQWLALQGHRVLLIEG 143 (387)
T ss_pred ceEEEEecCCCCCcH-HHHHHHHHHHHHhCCCcEEEEeC
Confidence 4455454 43333 34556788899999999999995
No 295
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=32.24 E-value=69 Score=27.59 Aligned_cols=31 Identities=23% Similarity=0.369 Sum_probs=25.4
Q ss_pred EEEEecccCCCchhhHHHHHHHHhCCCEEEeecC
Q 024721 63 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 63 vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
||++|..+... ++.+++.|+++|+.|..+-.
T Consensus 2 il~~~~~~p~~---~~~la~~L~~~G~~v~~~~~ 32 (396)
T cd03818 2 ILFVHQNFPGQ---FRHLAPALAAQGHEVVFLTE 32 (396)
T ss_pred EEEECCCCchh---HHHHHHHHHHCCCEEEEEec
Confidence 78888877653 57899999999999988765
No 296
>COG1152 CdhA CO dehydrogenase/acetyl-CoA synthase alpha subunit [Energy production and conversion]
Probab=32.16 E-value=2.8e+02 Score=25.79 Aligned_cols=37 Identities=8% Similarity=0.150 Sum_probs=24.7
Q ss_pred CCeeEEEEecccC--CCchhhHHHHHHHHhCCCEEEeec
Q 024721 59 SKKAVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPD 95 (263)
Q Consensus 59 ~~~~vv~~h~~~g--~~~~~~~~~~~~l~~~G~~vv~~d 95 (263)
.-|+||.+-|=.+ ........+++.|.+++|.|++.-
T Consensus 498 ~IPGIia~vgC~nyp~g~k~v~~iaeefl~RnyiVvttG 536 (772)
T COG1152 498 TIPGIIAVIGCPNYPAGTKDVYKIAEEFLKRNYIVVTTG 536 (772)
T ss_pred CCCeEEEEecCCCCCcchhhHHHHHHHHHHcCeEEEecc
Confidence 3466666654333 222356778999999999999764
No 297
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=31.83 E-value=2.1e+02 Score=21.06 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=26.7
Q ss_pred CCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecC
Q 024721 58 HSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 58 ~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+.+|.|++.--|...+.....-+++.|++.||.|+..-.
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~ 48 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGL 48 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCC
Confidence 345666665544544444556788899999999998765
No 298
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=31.19 E-value=78 Score=24.81 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=27.6
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhC-CCEEEeecC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDF 96 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~-G~~vv~~d~ 96 (263)
..+.|+++.-..+....+...+.+.|.+. |+.+...+.
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~ 68 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHL 68 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEec
Confidence 44568888876665445667777888888 998888774
No 299
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=30.87 E-value=1.7e+02 Score=27.63 Aligned_cols=37 Identities=11% Similarity=0.097 Sum_probs=26.0
Q ss_pred CeeEEEEecccCC---------CchhhHHHHHHHHhCCCEEEeecC
Q 024721 60 KKAVLMISDIYGD---------EPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 60 ~~~vv~~h~~~g~---------~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+-+||+.|+.... +...+....+.|.++||.++.++-
T Consensus 48 ~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~e 93 (671)
T PRK14582 48 GFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQ 93 (671)
T ss_pred ceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHH
Confidence 3567777765321 123567788899999999999874
No 300
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=30.65 E-value=3.4e+02 Score=23.18 Aligned_cols=112 Identities=18% Similarity=0.201 Sum_probs=66.1
Q ss_pred HHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhc---CCCeEEEEEEeccHHHHHH
Q 024721 80 VADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK---GVSAVGAAGFCWGGKVAVK 156 (263)
Q Consensus 80 ~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~i~~~G~S~Gg~~a~~ 156 (263)
-.++--.+||.|+..|. -|+ .++-.++.+.+..+.+.+... .+..+.++--+.-|.-++.
T Consensus 213 Ai~~Akar~~DvvliDT-AGR----------------Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~ 275 (340)
T COG0552 213 AIQAAKARGIDVVLIDT-AGR----------------LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALS 275 (340)
T ss_pred HHHHHHHcCCCEEEEeC-ccc----------------ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHH
Confidence 34455556888888887 332 122345556666666666544 2456888889999999988
Q ss_pred hhcC--C--CccEEEEe--cCCCC---ChhhhhcccccEEEEe-cCC-CCCCChHHHHHHHHHH
Q 024721 157 LASN--Q--DVQAAVLL--HPSNV---TEDEIKVVKVPIAVLG-AER-DNGLPPAQMKRFDEIL 209 (263)
Q Consensus 157 ~a~~--~--~i~~~v~~--~~~~~---~~~~~~~~~~p~l~i~-G~~-D~~~~~~~~~~~~~~l 209 (263)
=|+. . .+.++++- .+... -..-...+..|++++. |+. |++.| ...+.+.+.|
T Consensus 276 QAk~F~eav~l~GiIlTKlDgtAKGG~il~I~~~l~~PI~fiGvGE~~~DL~~-Fd~~~fv~~L 338 (340)
T COG0552 276 QAKIFNEAVGLDGIILTKLDGTAKGGIILSIAYELGIPIKFIGVGEGYDDLRP-FDAEWFVDAL 338 (340)
T ss_pred HHHHHHHhcCCceEEEEecccCCCcceeeeHHHHhCCCEEEEeCCCChhhccc-cCHHHHHHHh
Confidence 7732 2 67777763 22111 1122345678998886 444 55544 3445555544
No 301
>PRK09810 entericidin A; Provisional
Probab=30.65 E-value=64 Score=18.05 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=8.2
Q ss_pred ChhHHHHHHHHHHHHh
Q 024721 1 MMELILLTSLLLNIAS 16 (263)
Q Consensus 1 ~~~~~~~~~l~~~~~~ 16 (263)
||+.+++..++..+.+
T Consensus 1 mMkk~~~l~~~~~~~L 16 (41)
T PRK09810 1 MMKRLIVLVLLASTLL 16 (41)
T ss_pred ChHHHHHHHHHHHHHH
Confidence 6666555554444433
No 302
>PF14084 DUF4264: Protein of unknown function (DUF4264)
Probab=30.48 E-value=35 Score=20.16 Aligned_cols=14 Identities=14% Similarity=0.392 Sum_probs=11.5
Q ss_pred HHHHHHHHHHhhhC
Q 024721 249 EDMINWFEKHVKCD 262 (263)
Q Consensus 249 ~~~~~fl~~~l~~~ 262 (263)
-.+++||+++|+.+
T Consensus 17 YKvVDfLNktLK~~ 30 (52)
T PF14084_consen 17 YKVVDFLNKTLKDK 30 (52)
T ss_pred HHHHHHHhhhhhhc
Confidence 35899999999875
No 303
>PRK02399 hypothetical protein; Provisional
Probab=30.06 E-value=3.9e+02 Score=23.57 Aligned_cols=96 Identities=19% Similarity=0.133 Sum_probs=49.6
Q ss_pred EEEecccCCCchhhHHHHHHHHhCCCEEEeecCC-CCCCCCCCCCCc---------chhhhhhcCCC----ccccccHHH
Q 024721 64 LMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF-HGDAANPSNPKY---------DKDTWRKNHTT----DKGYEDAKP 129 (263)
Q Consensus 64 v~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~-~g~~~~~~~~~~---------~~~~~~~~~~~----~~~~~d~~~ 129 (263)
|++-+-+..+..-+..+.+.+.+.|..|+.+|.- .+.+....+... +........+. +...+-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 4455555555555667777888889999999982 222211111111 00111111001 111112222
Q ss_pred HHHHHHhc-CCCeEEEEEEeccHHHHHHhhc
Q 024721 130 VIAALKEK-GVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 130 ~~~~l~~~-~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
+++.+.+. ...-|.-+|-|.|..++..+.+
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr 116 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMR 116 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHH
Confidence 33323233 3567888999999999888774
No 304
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=29.40 E-value=67 Score=23.73 Aligned_cols=30 Identities=37% Similarity=0.398 Sum_probs=22.6
Q ss_pred HHHHHHHhcCC--CeEEEEEEeccHHHHHHhh
Q 024721 129 PVIAALKEKGV--SAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 129 ~~~~~l~~~~~--~~i~~~G~S~Gg~~a~~~a 158 (263)
.+++.+.+++. ..-.+.|.|.|+.++..++
T Consensus 15 gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 15 GVLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 44555655544 5667899999999999988
No 305
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=29.39 E-value=1.9e+02 Score=19.89 Aligned_cols=19 Identities=32% Similarity=0.391 Sum_probs=13.7
Q ss_pred HHHHHHHHhCCCEEEeecC
Q 024721 78 RSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 78 ~~~~~~l~~~G~~vv~~d~ 96 (263)
.-++..|...||.|+....
T Consensus 17 ~~~~~~l~~~G~~V~~lg~ 35 (119)
T cd02067 17 NIVARALRDAGFEVIDLGV 35 (119)
T ss_pred HHHHHHHHHCCCEEEECCC
Confidence 4567778788999966543
No 306
>PRK10673 acyl-CoA esterase; Provisional
Probab=29.19 E-value=2.8e+02 Score=21.67 Aligned_cols=62 Identities=16% Similarity=0.152 Sum_probs=36.0
Q ss_pred cccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHHHHHHHHHH
Q 024721 183 KVPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHEDMINWFEK 257 (263)
Q Consensus 183 ~~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 257 (263)
..|++++||--+.. .....+...|.+ ...++.++--||+........ ..++..+.+.++++.
T Consensus 16 ~~~iv~lhG~~~~~---~~~~~~~~~l~~----~~~vi~~D~~G~G~s~~~~~~------~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 16 NSPIVLVHGLFGSL---DNLGVLARDLVN----DHDIIQVDMRNHGLSPRDPVM------NYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCEEEECCCCCch---hHHHHHHHHHhh----CCeEEEECCCCCCCCCCCCCC------CHHHHHHHHHHHHHH
Confidence 46899999976542 344455666632 466777777788865432221 123445556666653
No 307
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=29.15 E-value=2.8e+02 Score=21.93 Aligned_cols=101 Identities=10% Similarity=0.151 Sum_probs=52.6
Q ss_pred HHHHHHhcCCCeEEEEEEeccHHHHHHhh-----cCC-----CccEEEEecCCCCChhhhhcccccEEEEecCCCCCC-C
Q 024721 130 VIAALKEKGVSAVGAAGFCWGGKVAVKLA-----SNQ-----DVQAAVLLHPSNVTEDEIKVVKVPIAVLGAERDNGL-P 198 (263)
Q Consensus 130 ~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a-----~~~-----~i~~~v~~~~~~~~~~~~~~~~~p~l~i~G~~D~~~-~ 198 (263)
+.+.+.+.+..+.=++|.|+|=.+..++. +.+ ....+..+--.......+..+...+-++.--+|.++ .
T Consensus 82 Lcs~~kkld~mkkkvlGICFGHQiiara~Gg~Vgra~KG~~~~lg~itivk~~~~~~~yFG~~~~~l~IikcHqDevle~ 161 (245)
T KOG3179|consen 82 LCSFVKKLDFMKKKVLGICFGHQIIARAKGGKVGRAPKGPDLGLGSITIVKDAEKPEKYFGEIPKSLNIIKCHQDEVLEL 161 (245)
T ss_pred HHHHHHHHHhhccceEEEeccHHHHHHhhCCccccCCCCCcccccceEEEEecccchhhcccchhhhhHHhhcccceecC
Confidence 33344444444566899999999988876 222 122233222222233334444444445555567765 3
Q ss_pred hHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCC
Q 024721 199 PAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVN 236 (263)
Q Consensus 199 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~ 236 (263)
|+..+.+... ..+++.+|.-..|.++....+.
T Consensus 162 PE~a~llasS------e~ceve~fs~~~~~l~fQGHPE 193 (245)
T KOG3179|consen 162 PEGAELLASS------EKCEVEMFSIEDHLLCFQGHPE 193 (245)
T ss_pred Cchhhhhccc------cccceEEEEecceEEEecCCch
Confidence 4554433221 2455555555588887666554
No 308
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.95 E-value=63 Score=26.07 Aligned_cols=31 Identities=32% Similarity=0.257 Sum_probs=23.6
Q ss_pred HHHHHHHhcCCC---eE-EEEEEeccHHHHHHhhc
Q 024721 129 PVIAALKEKGVS---AV-GAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 129 ~~~~~l~~~~~~---~i-~~~G~S~Gg~~a~~~a~ 159 (263)
.+++.|.+++.. ++ .+.|-|.|+.++..++.
T Consensus 16 GVl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 16 GAAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 566677776543 33 79999999999999874
No 309
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=28.79 E-value=72 Score=25.67 Aligned_cols=31 Identities=29% Similarity=0.249 Sum_probs=23.5
Q ss_pred HHHHHHHhcCCC--e--EEEEEEeccHHHHHHhhc
Q 024721 129 PVIAALKEKGVS--A--VGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 129 ~~~~~l~~~~~~--~--i~~~G~S~Gg~~a~~~a~ 159 (263)
.+++.+.+++.. + -.+.|-|.|+.++..++.
T Consensus 16 GVl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~ 50 (243)
T cd07204 16 GVASALREHAPRLLQNARRIAGASAGAIVAAVVLC 50 (243)
T ss_pred HHHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHh
Confidence 566677766543 1 289999999999999874
No 310
>PRK03094 hypothetical protein; Provisional
Probab=28.27 E-value=72 Score=20.83 Aligned_cols=21 Identities=19% Similarity=0.197 Sum_probs=17.3
Q ss_pred hhHHHHHHHHhCCCEEEeecC
Q 024721 76 IYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 76 ~~~~~~~~l~~~G~~vv~~d~ 96 (263)
....+.++|.++||.|+-++.
T Consensus 9 ~Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 9 SLTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred CcHHHHHHHHHCCCEEEecCc
Confidence 346789999999999998764
No 311
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=28.21 E-value=1.9e+02 Score=19.29 Aligned_cols=25 Identities=12% Similarity=0.258 Sum_probs=13.4
Q ss_pred EEEEecccCCC--chhhHHHHHHHHhC
Q 024721 63 VLMISDIYGDE--PPIYRSVADKVAGA 87 (263)
Q Consensus 63 vv~~h~~~g~~--~~~~~~~~~~l~~~ 87 (263)
+|++.||.... ...+..+++.+.++
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~~~ 28 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLRER 28 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 45555544331 22456677777665
No 312
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.14 E-value=1.3e+02 Score=25.57 Aligned_cols=38 Identities=16% Similarity=0.229 Sum_probs=29.4
Q ss_pred CCCeeEEEEecccC-CCchhhHHHHHHHHhCCCEEEeec
Q 024721 58 HSKKAVLMISDIYG-DEPPIYRSVADKVAGAGFLVVAPD 95 (263)
Q Consensus 58 ~~~~~vv~~h~~~g-~~~~~~~~~~~~l~~~G~~vv~~d 95 (263)
..+|-|+++-|..| +.+.....++.+|-+.|+.|+..-
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA 174 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAA 174 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEe
Confidence 34577888888776 445577889999999999998774
No 313
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=28.12 E-value=68 Score=26.32 Aligned_cols=33 Identities=6% Similarity=0.116 Sum_probs=24.7
Q ss_pred eEEEEecccCCCchhhHHHHHHHHhCCCEEEeec
Q 024721 62 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPD 95 (263)
Q Consensus 62 ~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d 95 (263)
.||++|.... .......+.+.|.++||.++.++
T Consensus 232 ~IILmHd~~~-T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTAS-STEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCcc-HHHHHHHHHHHHHHCCCEEEeHH
Confidence 4888886533 23456778889999999999875
No 314
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=27.81 E-value=2.4e+02 Score=22.84 Aligned_cols=27 Identities=26% Similarity=0.356 Sum_probs=19.9
Q ss_pred HHHHHHHHhCCCEEEeecCCCCCCCCCC
Q 024721 78 RSVADKVAGAGFLVVAPDFFHGDAANPS 105 (263)
Q Consensus 78 ~~~~~~l~~~G~~vv~~d~~~g~~~~~~ 105 (263)
...++.|.+.|..|+.+|. .|.+-.++
T Consensus 60 ~amve~L~~~GvdV~ifdd-tg~~~TPD 86 (318)
T COG4874 60 NAMVEGLRQAGVDVVIFDD-TGQGETPD 86 (318)
T ss_pred HHHHHHHHhcCceEEEeec-CCCCCCCc
Confidence 3456788888999999999 56554443
No 315
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=27.72 E-value=2.4e+02 Score=23.92 Aligned_cols=102 Identities=13% Similarity=0.054 Sum_probs=55.3
Q ss_pred cccCCCchhhHHHHHHHHhCC--CEEEeecCC-CCCCCCCCCCCcchhh-hhhc--CCCccccccHHHHHHHHHhcC-CC
Q 024721 68 DIYGDEPPIYRSVADKVAGAG--FLVVAPDFF-HGDAANPSNPKYDKDT-WRKN--HTTDKGYEDAKPVIAALKEKG-VS 140 (263)
Q Consensus 68 ~~~g~~~~~~~~~~~~l~~~G--~~vv~~d~~-~g~~~~~~~~~~~~~~-~~~~--~~~~~~~~d~~~~~~~l~~~~-~~ 140 (263)
.|.|++......|++.+.... +.|++++-+ ++... .+.-..... .... .......+.+..+++.+.... ..
T Consensus 60 YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~--k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 137 (326)
T PF04084_consen 60 YGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSI--KDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRPSPP 137 (326)
T ss_pred EecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcH--HHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccCCCC
Confidence 446777778888888777662 566666543 32210 000000000 0000 112233345555666666654 67
Q ss_pred eEEEEEEeccHHH--------HHH-hhcCCCccEEEEecC
Q 024721 141 AVGAAGFCWGGKV--------AVK-LASNQDVQAAVLLHP 171 (263)
Q Consensus 141 ~i~~~G~S~Gg~~--------a~~-~a~~~~i~~~v~~~~ 171 (263)
+++++=|+.=|.. ++. +|+.|.|.-++.+.-
T Consensus 138 ~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~I~lIASiDh 177 (326)
T PF04084_consen 138 PLYLVIHNIDGPSLRNEKAQSLLAQLASIPNIHLIASIDH 177 (326)
T ss_pred ceEEEEECCCChhhcChHHHHHHHHHHcCCCeEEEEeccC
Confidence 9999999887765 222 556777777777653
No 316
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.49 E-value=1.2e+02 Score=26.60 Aligned_cols=43 Identities=23% Similarity=0.355 Sum_probs=30.7
Q ss_pred CCCCCCeeEEEEecccCC-CchhhHHHHHHHHhCCCEEEee--cCC
Q 024721 55 GPPHSKKAVLMISDIYGD-EPPIYRSVADKVAGAGFLVVAP--DFF 97 (263)
Q Consensus 55 ~~~~~~~~vv~~h~~~g~-~~~~~~~~~~~l~~~G~~vv~~--d~~ 97 (263)
.|...+|.||++-|.-|. .......++.++..+||.+..+ |.+
T Consensus 95 ~~~K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaDTF 140 (483)
T KOG0780|consen 95 QPKKGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCADTF 140 (483)
T ss_pred ccccCCCcEEEEEeccCCCcceeHHHHHHHHHhcCCceeEEeeccc
Confidence 345567888988887663 3456678899999999977654 553
No 317
>TIGR03566 FMN_reduc_MsuE FMN reductase, MsuE subfamily. Members of this protein family use NAD(P)H to reduce FMN and regenerate FMNH2. Members include the NADH-dependent enzyme MsuE from Pseudomonas aeruginosa, which serves as a partner to an FMNH2-dependent alkanesulfonate monooxygenase. The NADP-dependent enzyme from E. coli is outside the scope of this model.
Probab=27.44 E-value=1.3e+02 Score=22.49 Aligned_cols=51 Identities=14% Similarity=-0.003 Sum_probs=31.9
Q ss_pred hhhHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHh--cCCCeEEEEEEe
Q 024721 75 PIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKE--KGVSAVGAAGFC 148 (263)
Q Consensus 75 ~~~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~--~~~~~i~~~G~S 148 (263)
+....+.+.+.+. |+.+.+|.|.++-+ ..++.++|++.. ...+++.+++.|
T Consensus 57 ~~~~~~~~~i~~AD~iIi~tP~Y~~s~~-----------------------~~LKn~lD~~~~~~l~~K~~~~v~~~ 110 (174)
T TIGR03566 57 PDAERILQAIESADLLVVGSPVYRGSYT-----------------------GLFKHLFDLVDPNALIGKPVLLAATG 110 (174)
T ss_pred HHHHHHHHHHHHCCEEEEECCcCcCcCc-----------------------HHHHHHHHhcCHhHhCCCEEEEEEec
Confidence 3566777777776 88999999843322 456666666532 134556666554
No 318
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=27.41 E-value=1.3e+02 Score=24.10 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=22.4
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecC
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+..|++-|...+. .-..++..|++.||.|++-.-
T Consensus 7 ~k~VlItgcs~GG--IG~ala~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 7 PKKVLITGCSSGG--IGYALAKEFARNGYLVYATAR 40 (289)
T ss_pred CCeEEEeecCCcc--hhHHHHHHHHhCCeEEEEEcc
Confidence 3445555443322 235789999999999998754
No 319
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=27.40 E-value=2.4e+02 Score=22.75 Aligned_cols=22 Identities=18% Similarity=-0.004 Sum_probs=17.5
Q ss_pred hhHHHHHHHHhCCCEEEeecCC
Q 024721 76 IYRSVADKVAGAGFLVVAPDFF 97 (263)
Q Consensus 76 ~~~~~~~~l~~~G~~vv~~d~~ 97 (263)
.-+.+++.....||.|.++|.|
T Consensus 111 va~~la~la~~lGf~V~v~D~R 132 (246)
T TIGR02964 111 VGRALVRALAPLPCRVTWVDSR 132 (246)
T ss_pred HHHHHHHHHhcCCCEEEEEeCC
Confidence 4466777777789999999985
No 320
>PRK06490 glutamine amidotransferase; Provisional
Probab=27.29 E-value=3.3e+02 Score=21.85 Aligned_cols=91 Identities=10% Similarity=0.065 Sum_probs=42.2
Q ss_pred eeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcc---h-hhhhhcCCCccccccHHHHHHHHHh
Q 024721 61 KAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYD---K-DTWRKNHTTDKGYEDAKPVIAALKE 136 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~---~-~~~~~~~~~~~~~~d~~~~~~~l~~ 136 (263)
..+|+.|-..+.. ..+.+.|.+.|+.+-..+...+..........+ . ++-....+...++.+...+++...+
T Consensus 9 ~vlvi~h~~~~~~----g~l~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~~ 84 (239)
T PRK06490 9 PVLIVLHQERSTP----GRVGQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPLK 84 (239)
T ss_pred eEEEEecCCCCCC----hHHHHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHHHH
Confidence 3445556544442 346677777887777665432322110100000 0 0000111112222333333333222
Q ss_pred cCCCeEEEEEEeccHHHHHHhh
Q 024721 137 KGVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 137 ~~~~~i~~~G~S~Gg~~a~~~a 158 (263)
. .+=++|.|+|..+...+.
T Consensus 85 ~---~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 85 E---NKPFLGICLGAQMLARHL 103 (239)
T ss_pred C---CCCEEEECHhHHHHHHHc
Confidence 2 355999999999888764
No 321
>PF09989 DUF2229: CoA enzyme activase uncharacterised domain (DUF2229); InterPro: IPR018709 Proteins containing this domain include various bacterial hypothetical proteins, as well as CoA enzyme activases. The exact function of this domain has not, as yet, been defined.
Probab=26.95 E-value=80 Score=25.08 Aligned_cols=37 Identities=27% Similarity=0.489 Sum_probs=26.8
Q ss_pred CeeEEEEecccCC-CchhhHHHHHHHHhCCCEEEeecC
Q 024721 60 KKAVLMISDIYGD-EPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 60 ~~~vv~~h~~~g~-~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
++.|+++.+-+.. +......+.+.|.+.|+.|+..|+
T Consensus 183 ~~~Ivl~GrpY~~~D~~in~~I~~~l~~~G~~vit~d~ 220 (221)
T PF09989_consen 183 KPAIVLLGRPYNIYDPFINMGIPDKLRSLGVPVITEDM 220 (221)
T ss_pred CceEEEEcCCCcCCCcccCCchHHHHHHCCCeeeCccc
Confidence 4567777655553 322446789999999999999986
No 322
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=26.68 E-value=1.2e+02 Score=22.64 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=24.9
Q ss_pred eeEEEEecccCCCchh-hHHHHHHHHhCCCEEEeecC
Q 024721 61 KAVLMISDIYGDEPPI-YRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 61 ~~vv~~h~~~g~~~~~-~~~~~~~l~~~G~~vv~~d~ 96 (263)
+.+|++-|..|..... -..+.+.|.+.|+.|+..|-
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 5688888887755333 34566677788999999986
No 323
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.53 E-value=74 Score=25.85 Aligned_cols=32 Identities=25% Similarity=0.191 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCCC-eEEEEEEeccHHHHHHhhc
Q 024721 128 KPVIAALKEKGVS-AVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 128 ~~~~~~l~~~~~~-~i~~~G~S~Gg~~a~~~a~ 159 (263)
..+++.+.+.+.. .=.++|.|.|+.++..++.
T Consensus 14 ~Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~ 46 (266)
T cd07208 14 AGVLDAFLEAGIRPFDLVIGVSAGALNAASYLS 46 (266)
T ss_pred HHHHHHHHHcCCCCCCEEEEECHHHHhHHHHHh
Confidence 3566677666555 4489999999999999773
No 324
>KOG2853 consensus Possible oxidoreductase [General function prediction only]
Probab=25.83 E-value=2.2e+02 Score=24.63 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=18.9
Q ss_pred EEEEeccc-CCCchhhHHHHHHHHhCCCEEEeecC
Q 024721 63 VLMISDIY-GDEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 63 vv~~h~~~-g~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
||++.||. |.+ .-.++-+...+.|+.|++++-
T Consensus 89 VvIIGGG~~GsS--~AfWLKer~rd~gl~VvVVEr 121 (509)
T KOG2853|consen 89 VVIIGGGGSGSS--TAFWLKERARDEGLNVVVVER 121 (509)
T ss_pred EEEECCCccchh--hHHHHHHHhhcCCceEEEEec
Confidence 55555443 333 223445555566899999975
No 325
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=25.73 E-value=73 Score=28.12 Aligned_cols=32 Identities=28% Similarity=0.185 Sum_probs=24.9
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
..+++.+.+++..+=.+.|-|.|+.++..++.
T Consensus 89 iGVLkaL~E~gl~p~vIsGTSaGAivAal~as 120 (421)
T cd07230 89 IGVLKALFEANLLPRIISGSSAGSIVAAILCT 120 (421)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 35667777766555689999999999998774
No 326
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=25.67 E-value=1.3e+02 Score=23.49 Aligned_cols=38 Identities=21% Similarity=0.153 Sum_probs=25.4
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
..+.|+++.-..+....+...+.+.+.+.|+.+..+..
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~ 65 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLL 65 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEec
Confidence 34567777766554444566677788888987776654
No 327
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=25.58 E-value=1.1e+02 Score=25.76 Aligned_cols=32 Identities=16% Similarity=0.402 Sum_probs=25.9
Q ss_pred cccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhh
Q 024721 124 YEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 124 ~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a 158 (263)
..++..+++|+++. ..-++|.|||+.+++.+.
T Consensus 121 W~El~~i~~w~~~~---~~s~LgICwGaQa~a~al 152 (302)
T PRK05368 121 WDELKEILDWAKTH---VTSTLFICWAAQAALYHL 152 (302)
T ss_pred HHHHHHHHHHHHHc---CCCEEEEcHHHHHHHHHc
Confidence 35588899999876 466899999999998765
No 328
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=25.37 E-value=76 Score=26.71 Aligned_cols=28 Identities=32% Similarity=0.310 Sum_probs=21.0
Q ss_pred HHHHHhcC--CCeEEEEEEeccHHHHHHhh
Q 024721 131 IAALKEKG--VSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 131 ~~~l~~~~--~~~i~~~G~S~Gg~~a~~~a 158 (263)
.+.+.+++ ..+.++.|||+|=+.++.++
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~a 103 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAA 103 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHc
Confidence 34444433 67889999999999998876
No 329
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=25.36 E-value=84 Score=25.49 Aligned_cols=32 Identities=25% Similarity=0.133 Sum_probs=23.3
Q ss_pred HHHHHHHHhcCCC----eEEEEEEeccHHHHHHhhc
Q 024721 128 KPVIAALKEKGVS----AVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 128 ~~~~~~l~~~~~~----~i~~~G~S~Gg~~a~~~a~ 159 (263)
..+++.+.++++. .-.+.|-|.|+..+..++.
T Consensus 20 ~GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~ 55 (249)
T cd07220 20 VGVASCLLEHAPFLVANARKIYGASAGALTATALVT 55 (249)
T ss_pred HHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHc
Confidence 3566667666543 3568899999999998774
No 330
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=25.32 E-value=1.4e+02 Score=22.90 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=24.5
Q ss_pred eeEEEEecccC--CCchhhHHHHHHHHhCCCEEEeecC
Q 024721 61 KAVLMISDIYG--DEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 61 ~~vv~~h~~~g--~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+.+|.+.+.-| ++...-..++..|++.|+.|+.+|.
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~ 54 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDG 54 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 34555553333 2233456788999999999999997
No 331
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=25.02 E-value=1.1e+02 Score=20.86 Aligned_cols=31 Identities=32% Similarity=0.456 Sum_probs=22.9
Q ss_pred EEEEecccCCCchhhHHHHHHHHhC-CCEEEeecC
Q 024721 63 VLMISDIYGDEPPIYRSVADKVAGA-GFLVVAPDF 96 (263)
Q Consensus 63 vv~~h~~~g~~~~~~~~~~~~l~~~-G~~vv~~d~ 96 (263)
+|++.|..|...+ .+++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGKS---T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS---TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH---HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH---HHHHHHHHHHCCeEEEecc
Confidence 4677777775543 478888887 999998876
No 332
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=24.95 E-value=3.4e+02 Score=23.20 Aligned_cols=108 Identities=11% Similarity=0.019 Sum_probs=60.4
Q ss_pred CeeEEEEecccCCCch---hhHHHHH----------HHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCcccccc
Q 024721 60 KKAVLMISDIYGDEPP---IYRSVAD----------KVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYED 126 (263)
Q Consensus 60 ~~~vv~~h~~~g~~~~---~~~~~~~----------~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (263)
.|..+.+.|+.|.+.. +++++.. .+.+ -..++.+|.+-|.+.++-+.... +.+ +..+...|
T Consensus 31 ~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk-~adllfvDnPVGaGfSyVdg~~~----Y~~-~~~qia~D 104 (414)
T KOG1283|consen 31 RPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK-DADLLFVDNPVGAGFSYVDGSSA----YTT-NNKQIALD 104 (414)
T ss_pred CCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh-hccEEEecCCCcCceeeecCccc----ccc-cHHHHHHH
Confidence 4567778888775433 2333221 1112 25677888865666554322111 111 12344456
Q ss_pred HHHHHHHHHhc----CCCeEEEEEEeccHHHHHHhhcC-------C----CccEEEEecCCC
Q 024721 127 AKPVIAALKEK----GVSAVGAAGFCWGGKVAVKLASN-------Q----DVQAAVLLHPSN 173 (263)
Q Consensus 127 ~~~~~~~l~~~----~~~~i~~~G~S~Gg~~a~~~a~~-------~----~i~~~v~~~~~~ 173 (263)
+..+++.+-.. ...++.++--|.||-++...+.. . .+.++++-.++.
T Consensus 105 l~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 105 LVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred HHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 66655544332 34589999999999999987732 1 456666655554
No 333
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=24.92 E-value=3.7e+02 Score=21.65 Aligned_cols=91 Identities=25% Similarity=0.239 Sum_probs=54.7
Q ss_pred eEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCCC-
Q 024721 62 AVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGVS- 140 (263)
Q Consensus 62 ~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~- 140 (263)
.++..|-|+-. ...++.|.+.+..|+..|+. |.- ... ..-+.....++|....+++|.+.+.+
T Consensus 89 l~inaHvGfvd-----E~~~eklk~~~vdvvsLDfv-gDn-------~vI---k~vy~l~ksv~dyl~~l~~L~e~~irv 152 (275)
T COG1856 89 LLINAHVGFVD-----ESDLEKLKEELVDVVSLDFV-GDN-------DVI---KRVYKLPKSVEDYLRSLLLLKENGIRV 152 (275)
T ss_pred eEEEEEeeecc-----HHHHHHHHHhcCcEEEEeec-CCh-------HHH---HHHHcCCccHHHHHHHHHHHHHcCcee
Confidence 45566655443 34567788889999999994 321 011 11123344567888888888876543
Q ss_pred -eEEEEEEeccHHH----HHHhhcCCCccEEEE
Q 024721 141 -AVGAAGFCWGGKV----AVKLASNQDVQAAVL 168 (263)
Q Consensus 141 -~i~~~G~S~Gg~~----a~~~a~~~~i~~~v~ 168 (263)
+-+.+|-++|+.- ++.+..+..+.++|+
T Consensus 153 vpHitiGL~~gki~~e~kaIdiL~~~~~DalVl 185 (275)
T COG1856 153 VPHITIGLDFGKIHGEFKAIDILVNYEPDALVL 185 (275)
T ss_pred ceeEEEEeccCcccchHHHHHHHhcCCCCeEEE
Confidence 5578999998753 444444444444444
No 334
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=24.91 E-value=85 Score=20.50 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=17.7
Q ss_pred hhHHHHHHHHhCCCEEEeecC
Q 024721 76 IYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 76 ~~~~~~~~l~~~G~~vv~~d~ 96 (263)
....+.++|.++||.|+.++.
T Consensus 9 ~Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 9 GLSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred CchHHHHHHHHCCCEEEecCC
Confidence 345788999999999999875
No 335
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=24.80 E-value=3.1e+02 Score=24.74 Aligned_cols=60 Identities=20% Similarity=0.120 Sum_probs=40.8
Q ss_pred hhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHH
Q 024721 76 IYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAV 155 (263)
Q Consensus 76 ~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~ 155 (263)
.....++.|.+.|..++++|.-+|++ ..+..+++++++.-++..++.|...-.-.+.
T Consensus 225 ~~~~ra~~Lv~aGVd~i~~D~a~g~~-----------------------~~~~~~i~~i~~~~~~~~vi~g~~~t~~~~~ 281 (475)
T TIGR01303 225 DVGGKAKALLDAGVDVLVIDTAHGHQ-----------------------VKMISAIKAVRALDLGVPIVAGNVVSAEGVR 281 (475)
T ss_pred cHHHHHHHHHHhCCCEEEEeCCCCCc-----------------------HHHHHHHHHHHHHCCCCeEEEeccCCHHHHH
Confidence 45678889999999999999865543 4566777777765444455566555555555
Q ss_pred Hhh
Q 024721 156 KLA 158 (263)
Q Consensus 156 ~~a 158 (263)
.+.
T Consensus 282 ~l~ 284 (475)
T TIGR01303 282 DLL 284 (475)
T ss_pred HHH
Confidence 444
No 336
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=24.79 E-value=1.1e+02 Score=25.00 Aligned_cols=23 Identities=17% Similarity=0.158 Sum_probs=19.5
Q ss_pred chhhHHHHHHHHhCCCEEEeecC
Q 024721 74 PPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 74 ~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+..-..++..|+++|+.|+++|.
T Consensus 15 TT~a~nLA~~La~~G~rVLliD~ 37 (279)
T PRK13230 15 STTVCNIAAALAESGKKVLVVGC 37 (279)
T ss_pred HHHHHHHHHHHHhCCCEEEEEee
Confidence 34556789999999999999998
No 337
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=24.75 E-value=2.9e+02 Score=28.45 Aligned_cols=99 Identities=16% Similarity=0.080 Sum_probs=52.6
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHh------------h--c------CCCccEEEEecCCCCChhhhh-ccccc-E
Q 024721 129 PVIAALKEKGVSAVGAAGFCWGGKVAVKL------------A--S------NQDVQAAVLLHPSNVTEDEIK-VVKVP-I 186 (263)
Q Consensus 129 ~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~------------a--~------~~~i~~~v~~~~~~~~~~~~~-~~~~p-~ 186 (263)
++.|.|...+..+=+++|||.|-.-+..+ | + ...+++..+-.|- +-++.+ ++... +
T Consensus 571 aLtDlLs~lgi~PDGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~~l~kGaMAAVGL--sWEq~~~~~P~~~~ 648 (2376)
T KOG1202|consen 571 ALTDLLSCLGIRPDGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDTHLPKGAMAAVGL--SWEQCKSRCPPDVV 648 (2376)
T ss_pred HHHHHHHhcCCCCCcccccccchhcccccccccCHHHHHHHHHHcCceeccccCCCcchhhhcC--CHHHHhccCCCccc
Confidence 44455556678888999999985443321 1 0 0123333222222 222222 11111 2
Q ss_pred EEEecCCCCCC---ChHHHHHHHHHHHcCCCCceeEEEcCCCCcccccc
Q 024721 187 AVLGAERDNGL---PPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVR 232 (263)
Q Consensus 187 l~i~G~~D~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~ 232 (263)
=..|..+|... |.+.+..+.+.|+ +. .+-.......|-.|+.+
T Consensus 649 paCHNs~D~~TiSGp~a~v~~~v~qL~-~~--gvFak~V~t~G~aFHS~ 694 (2376)
T KOG1202|consen 649 PACHNSKDNVTISGPQASVFAFVEQLR-AE--GVFAKEVRTGGYAFHSP 694 (2376)
T ss_pred ccccCCCCceEecCChHHHHHHHHHhh-hc--CeeeeEecCCCccccCH
Confidence 34556666653 6778888999984 33 34455565567777654
No 338
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=24.53 E-value=1.3e+02 Score=21.89 Aligned_cols=34 Identities=12% Similarity=0.231 Sum_probs=21.0
Q ss_pred EEEEecccC-CCchhhHHHHHHHHhCCCEEEee-cC
Q 024721 63 VLMISDIYG-DEPPIYRSVADKVAGAGFLVVAP-DF 96 (263)
Q Consensus 63 vv~~h~~~g-~~~~~~~~~~~~l~~~G~~vv~~-d~ 96 (263)
+|.+.|.-+ +.+...+.+.++|.++||.|.++ +.
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~ 37 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHT 37 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEc
Confidence 455555444 33456788899999999998854 44
No 339
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=24.48 E-value=1.4e+02 Score=25.55 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=28.7
Q ss_pred CeeEEEE-ecccCCCchhhHHHHHHHHhCCCEEEeecCC
Q 024721 60 KKAVLMI-SDIYGDEPPIYRSVADKVAGAGFLVVAPDFF 97 (263)
Q Consensus 60 ~~~vv~~-h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~ 97 (263)
.+.++++ +..++.-.+.-+.++..|+++|+.|+-++..
T Consensus 4 ~~~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~ 42 (373)
T cd04950 4 RPDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEPP 42 (373)
T ss_pred CCeEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeCC
Confidence 3456666 4466655567788999999889999999883
No 340
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=24.47 E-value=3.9e+02 Score=21.74 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=19.9
Q ss_pred EEEecccCCCchhhHHH-HHHHHhC-CCEEEeecC
Q 024721 64 LMISDIYGDEPPIYRSV-ADKVAGA-GFLVVAPDF 96 (263)
Q Consensus 64 v~~h~~~g~~~~~~~~~-~~~l~~~-G~~vv~~d~ 96 (263)
|.+.|-.|........+ +..|.++ ||.|+++|.
T Consensus 3 IaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDa 37 (255)
T COG3640 3 IAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDA 37 (255)
T ss_pred EEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeC
Confidence 33444334333445554 6666666 599999997
No 341
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=24.34 E-value=2.4e+02 Score=19.24 Aligned_cols=27 Identities=11% Similarity=0.192 Sum_probs=16.0
Q ss_pred eEEEEecccCC-CchhhHHHHHHHHhCC
Q 024721 62 AVLMISDIYGD-EPPIYRSVADKVAGAG 88 (263)
Q Consensus 62 ~vv~~h~~~g~-~~~~~~~~~~~l~~~G 88 (263)
+||++.||.-. ....+..+.+.+.+++
T Consensus 2 ~illvgHGSr~~~~~~~~~l~~~l~~~~ 29 (103)
T cd03413 2 AVVFMGHGTDHPSNAVYAALEYVLREED 29 (103)
T ss_pred eEEEEECCCCchhhhHHHHHHHHHHhcC
Confidence 45666555432 2346677777777654
No 342
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.28 E-value=82 Score=27.69 Aligned_cols=32 Identities=25% Similarity=0.188 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
..+++.+.+.+..+=.+.|-|.|+.++..++.
T Consensus 83 ~GVlkaL~e~gllp~iI~GtSAGAivaalla~ 114 (407)
T cd07232 83 FGVVKALLDADLLPNVISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEECHHHHHHHHHHc
Confidence 35667777776666679999999999999874
No 343
>COG5510 Predicted small secreted protein [Function unknown]
Probab=24.24 E-value=93 Score=17.60 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=7.2
Q ss_pred ChhH---HHHHHHHHHHHhh
Q 024721 1 MMEL---ILLTSLLLNIASS 17 (263)
Q Consensus 1 ~~~~---~~~~~l~~~~~~~ 17 (263)
||++ +++..++.++.++
T Consensus 1 mmk~t~l~i~~vll~s~lla 20 (44)
T COG5510 1 MMKKTILLIALVLLASTLLA 20 (44)
T ss_pred CchHHHHHHHHHHHHHHHHH
Confidence 4555 3333333334333
No 344
>PRK11627 hypothetical protein; Provisional
Probab=24.17 E-value=3.4e+02 Score=21.03 Aligned_cols=13 Identities=8% Similarity=0.577 Sum_probs=9.9
Q ss_pred HHHHHHHhCCCEE
Q 024721 79 SVADKVAGAGFLV 91 (263)
Q Consensus 79 ~~~~~l~~~G~~v 91 (263)
.+.+.|.++||.+
T Consensus 83 ~l~~~l~~~G~~i 95 (192)
T PRK11627 83 VLEKQMTARGYMI 95 (192)
T ss_pred HHHHHHHHCCccc
Confidence 3556788889987
No 345
>PF15240 Pro-rich: Proline-rich
Probab=23.94 E-value=57 Score=24.91 Aligned_cols=17 Identities=47% Similarity=0.657 Sum_probs=10.3
Q ss_pred hhHHHHHHHHHHHHhhc
Q 024721 2 MELILLTSLLLNIASSQ 18 (263)
Q Consensus 2 ~~~~~~~~l~~~~~~~~ 18 (263)
|-|++|++.|+++++|-
T Consensus 1 MLlVLLSvALLALSSAQ 17 (179)
T PF15240_consen 1 MLLVLLSVALLALSSAQ 17 (179)
T ss_pred ChhHHHHHHHHHhhhcc
Confidence 44565666666666664
No 346
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=23.66 E-value=1.2e+02 Score=24.04 Aligned_cols=16 Identities=19% Similarity=0.154 Sum_probs=13.6
Q ss_pred HHHHHhCCCEEEeecC
Q 024721 81 ADKVAGAGFLVVAPDF 96 (263)
Q Consensus 81 ~~~l~~~G~~vv~~d~ 96 (263)
+..|+++||.|+.+|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 5556789999999998
No 347
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=23.63 E-value=3.5e+02 Score=20.87 Aligned_cols=99 Identities=12% Similarity=-0.028 Sum_probs=50.3
Q ss_pred hhhHHHHHHHHhCCCEEEeecCCCCCCCC---CCCCCcchhhhhhcCCCccccccHHHHHHHHHhc-----CCCeEEEEE
Q 024721 75 PIYRSVADKVAGAGFLVVAPDFFHGDAAN---PSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEK-----GVSAVGAAG 146 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~~d~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-----~~~~i~~~G 146 (263)
...+.++.+++++|+.|.+.-.....+.. ......-.-.....-..+...-|+..+...+... ..+-+.++|
T Consensus 21 T~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg 100 (185)
T PF09314_consen 21 TFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHALRFIKQDKIKYDIILILG 100 (185)
T ss_pred HHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHHHHHhhccccCCEEEEEc
Confidence 45566777788878776665332111111 1110000000000111244556777766665321 234577899
Q ss_pred EeccHHHHHHhhcCC--CccEEEEecCCC
Q 024721 147 FCWGGKVAVKLASNQ--DVQAAVLLHPSN 173 (263)
Q Consensus 147 ~S~Gg~~a~~~a~~~--~i~~~v~~~~~~ 173 (263)
.+.|+.+...+-.-. ..+-++-.+|..
T Consensus 101 ~~~g~~~~~~~r~~~~~g~~v~vN~DGlE 129 (185)
T PF09314_consen 101 YGIGPFFLPFLRKLRKKGGKVVVNMDGLE 129 (185)
T ss_pred CCccHHHHHHHHhhhhcCCcEEECCCcch
Confidence 998988877665333 446666666654
No 348
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=23.54 E-value=3.4e+02 Score=20.70 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=21.8
Q ss_pred HHHHHHHHhcCCCeEEEE----EEeccHHHHHHhhcCC
Q 024721 128 KPVIAALKEKGVSAVGAA----GFCWGGKVAVKLASNQ 161 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~----G~S~Gg~~a~~~a~~~ 161 (263)
..+++.+......-|..+ |++.||...+.++.+.
T Consensus 48 ~~i~~~l~~~~kPvia~v~~~~G~AasgG~~iala~D~ 85 (187)
T cd07020 48 REIVQAILASPVPVVVYVYPSGARAASAGTYILLAAHI 85 (187)
T ss_pred HHHHHHHHhCCCCEEEEEecCCCCchhHHHHHHHhCCc
Confidence 344444544433344445 9999999999888654
No 349
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=23.50 E-value=92 Score=26.35 Aligned_cols=31 Identities=26% Similarity=0.233 Sum_probs=24.3
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 129 PVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 129 ~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
.+++.+.+.+..+-.+.|-|.|+.++..++.
T Consensus 85 GVlkaL~e~gl~p~~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 85 GVVRTLVEHQLLPRVIAGSSVGSIVCAIIAT 115 (323)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 5566666666666679999999999998773
No 350
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=23.46 E-value=1.2e+02 Score=22.48 Aligned_cols=22 Identities=23% Similarity=0.157 Sum_probs=18.6
Q ss_pred hhhHHHHHHHHhCCCEEEeecC
Q 024721 75 PIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
..-..++..+++.|+.|+.+|.
T Consensus 15 t~a~~LA~~la~~g~~vllvD~ 36 (169)
T cd02037 15 TVAVNLALALAKLGYKVGLLDA 36 (169)
T ss_pred HHHHHHHHHHHHcCCcEEEEeC
Confidence 3456788899999999999997
No 351
>PRK03147 thiol-disulfide oxidoreductase; Provisional
Probab=23.40 E-value=2.5e+02 Score=20.64 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=13.4
Q ss_pred hHHHHHHHHhCCCEEEeecC
Q 024721 77 YRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 77 ~~~~~~~l~~~G~~vv~~d~ 96 (263)
+..+.+.+.+.++.++.++.
T Consensus 83 l~~~~~~~~~~~~~vi~i~~ 102 (173)
T PRK03147 83 MNELYPKYKEKGVEIIAVNV 102 (173)
T ss_pred HHHHHHHhhcCCeEEEEEEc
Confidence 34455556666788888876
No 352
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=23.13 E-value=1.6e+02 Score=25.81 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=23.9
Q ss_pred eEEEEe---cccCCCchhhHHHHHHHHhCCCEEEeecC
Q 024721 62 AVLMIS---DIYGDEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 62 ~vv~~h---~~~g~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
.||.+. ||-|- +..-..++..|+..|+.|+++|.
T Consensus 122 ~vIav~n~KGGvGK-TTta~nLA~~LA~~G~rVLlIDl 158 (405)
T PRK13869 122 QVIAVTNFKGGSGK-TTTSAHLAQYLALQGYRVLAVDL 158 (405)
T ss_pred eEEEEEcCCCCCCH-HHHHHHHHHHHHhcCCceEEEcC
Confidence 455444 33333 34456788899999999999998
No 353
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=23.01 E-value=1.4e+02 Score=23.08 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=23.5
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhC-CCEEEee
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGA-GFLVVAP 94 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~-G~~vv~~ 94 (263)
..++||++.||.|.... .+++.++++ ||.-+..
T Consensus 6 ~~~~IifVlGGPGsgKg---TqC~kiv~ky~ftHlSa 39 (195)
T KOG3079|consen 6 DKPPIIFVLGGPGSGKG---TQCEKIVEKYGFTHLSA 39 (195)
T ss_pred cCCCEEEEEcCCCCCcc---hHHHHHHHHcCceeecH
Confidence 45789999999997542 467777765 7766655
No 354
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=22.99 E-value=1.6e+02 Score=23.10 Aligned_cols=51 Identities=16% Similarity=0.263 Sum_probs=31.6
Q ss_pred CCeeEEEeCCCC-CCeeEEEEecccC-CCchhhHHHHHHHH-hCCCEEEeecCCCCC
Q 024721 47 GGLKAYVTGPPH-SKKAVLMISDIYG-DEPPIYRSVADKVA-GAGFLVVAPDFFHGD 100 (263)
Q Consensus 47 ~~~~~~~~~~~~-~~~~vv~~h~~~g-~~~~~~~~~~~~l~-~~G~~vv~~d~~~g~ 100 (263)
.++++++....- ... +.+.|..| +++.....+.+.+. ..|+.++.+|. +|.
T Consensus 10 ~~v~v~l~~~~l~~~H--~~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~-~GE 63 (229)
T PF01935_consen 10 SDVPVYLDLNKLFNRH--IAIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDP-HGE 63 (229)
T ss_pred CCceEEeeHHHhccce--EEEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcC-CCc
Confidence 346666654221 222 22335444 33456677888888 78999999998 775
No 355
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=22.77 E-value=1.1e+02 Score=25.82 Aligned_cols=17 Identities=35% Similarity=0.352 Sum_probs=15.4
Q ss_pred EEEEEeccHHHHHHhhc
Q 024721 143 GAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 143 ~~~G~S~Gg~~a~~~a~ 159 (263)
.+.|-|.||.++..++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 68999999999999884
No 356
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.66 E-value=2.9e+02 Score=22.61 Aligned_cols=58 Identities=24% Similarity=0.315 Sum_probs=40.6
Q ss_pred HHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCC-ccccccHHHHHHHHHhcCCCeEEEEE
Q 024721 78 RSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTT-DKGYEDAKPVIAALKEKGVSAVGAAG 146 (263)
Q Consensus 78 ~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~i~~~G 146 (263)
..+++...++||.++.+-.+ +... ..| ..++. .-.+.++-.++++++.++.+++++.|
T Consensus 18 ~~va~~a~~~G~~~~ii~l~-~eaD---------~~~-~~~e~~~~~iG~vg~lik~l~~~~v~~vVl~G 76 (279)
T COG3494 18 LEVAENARNQGYAPFIIGLR-GEAD---------PEL-KEFEYKEVSIGEVGKLIKLLKTEGVDRVVLAG 76 (279)
T ss_pred HHHHHHHHhCCCCcEEEEec-Cccc---------hhh-hcCCCeEEeHHHHHHHHHHHHHcCCcEEEEec
Confidence 56888888999999999874 3210 001 11222 24567899999999999888888886
No 357
>TIGR01378 thi_PPkinase thiamine pyrophosphokinase. This model has been revised. Originally, it described strictly eukaryotic thiamine pyrophosphokinase. However, it is now expanded to include also homologous enzymes, apparently functionally equivalent, from species that rely on thiamine pyrophosphokinase rather than thiamine-monophosphate kinase (TIGR01379) to produce the active TPP cofactor. This includes the thiamine pyrophosphokinase from Bacillus subtilis, previously designated YloS.
Probab=22.65 E-value=1e+02 Score=24.08 Aligned_cols=39 Identities=23% Similarity=0.342 Sum_probs=29.2
Q ss_pred CCccccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhh
Q 024721 119 TTDKGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 119 ~~~~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a 158 (263)
+.++-..|...+++++.+++.+.|.++|. +||++=-.++
T Consensus 67 ~~eKD~TD~e~Al~~~~~~~~~~i~i~Ga-~GgR~DH~la 105 (203)
T TIGR01378 67 PPEKDTTDLELALKYALERGADEITILGA-TGGRLDHTLA 105 (203)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEcC-CCCcHHHHHH
Confidence 33555679999999988888889999987 6767654443
No 358
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=22.58 E-value=1.4e+02 Score=23.64 Aligned_cols=22 Identities=27% Similarity=0.188 Sum_probs=18.5
Q ss_pred hhhHHHHHHHHhCCCEEEeecC
Q 024721 75 PIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
..-..++..|+++|+.|+.+|.
T Consensus 16 t~a~~LA~~la~~g~~VlliD~ 37 (251)
T TIGR01969 16 TITANLGVALAKLGKKVLALDA 37 (251)
T ss_pred HHHHHHHHHHHHCCCeEEEEeC
Confidence 3446688899999999999997
No 359
>PLN02757 sirohydrochlorine ferrochelatase
Probab=22.53 E-value=3.3e+02 Score=20.20 Aligned_cols=20 Identities=25% Similarity=0.227 Sum_probs=14.1
Q ss_pred cHHHHHHHHHhcCCCeEEEE
Q 024721 126 DAKPVIAALKEKGVSAVGAA 145 (263)
Q Consensus 126 d~~~~~~~l~~~~~~~i~~~ 145 (263)
++...++.+.+.+.++|+++
T Consensus 59 sl~eal~~l~~~g~~~vvVv 78 (154)
T PLN02757 59 SIKDAFGRCVEQGASRVIVS 78 (154)
T ss_pred CHHHHHHHHHHCCCCEEEEE
Confidence 56677777766677777776
No 360
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=22.47 E-value=2.2e+02 Score=22.87 Aligned_cols=23 Identities=22% Similarity=0.159 Sum_probs=19.8
Q ss_pred chhhHHHHHHHHhCCCEEEeecC
Q 024721 74 PPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 74 ~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
......++..|+++|-.|..+|.
T Consensus 16 TT~~~~LAs~la~~G~~V~lIDa 38 (231)
T PF07015_consen 16 TTAAMALASELAARGARVALIDA 38 (231)
T ss_pred HHHHHHHHHHHHHCCCeEEEEeC
Confidence 45667789999999999999997
No 361
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=22.43 E-value=1.2e+02 Score=24.88 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=27.6
Q ss_pred CeeEEEEecccC-CCchhhHHHHHHHHhCCCEEEeecC
Q 024721 60 KKAVLMISDIYG-DEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 60 ~~~vv~~h~~~g-~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
.|.||++.|+-+ +.......+.+.|-.+|+.|.++.-
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~ 92 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKA 92 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCC
Confidence 366777777655 3345677888888889999999965
No 362
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=22.41 E-value=1.4e+02 Score=24.04 Aligned_cols=23 Identities=13% Similarity=0.121 Sum_probs=19.5
Q ss_pred chhhHHHHHHHHhCCCEEEeecC
Q 024721 74 PPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 74 ~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+..-..++..|+++|+.|+++|.
T Consensus 15 TT~~~nLA~~La~~G~kVlliD~ 37 (270)
T cd02040 15 STTTQNLSAALAEMGKKVMIVGC 37 (270)
T ss_pred HHHHHHHHHHHHhCCCeEEEEEc
Confidence 34557789999999999999998
No 363
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=22.40 E-value=2.1e+02 Score=24.69 Aligned_cols=40 Identities=23% Similarity=0.298 Sum_probs=32.3
Q ss_pred CCCCeeEEEEecccCCCchhhHHHHHHHHhCCCEEEeecCC
Q 024721 57 PHSKKAVLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFF 97 (263)
Q Consensus 57 ~~~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~ 97 (263)
+.++.++|++.|--|.+ +.+..-|..|+..||.|=..-|.
T Consensus 10 ~~k~ra~vvVLGDvGRS-PRMqYHA~Sla~~gf~VdliGy~ 49 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRS-PRMQYHALSLAKLGFQVDLIGYV 49 (444)
T ss_pred cccceEEEEEecccCCC-hHHHHHHHHHHHcCCeEEEEEec
Confidence 34456777787777765 78899999999999999998884
No 364
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=22.39 E-value=53 Score=26.63 Aligned_cols=15 Identities=13% Similarity=0.209 Sum_probs=12.7
Q ss_pred CCCeEEEEEEeccHH
Q 024721 138 GVSAVGAAGFCWGGK 152 (263)
Q Consensus 138 ~~~~i~~~G~S~Gg~ 152 (263)
+.+.|.++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457999999999964
No 365
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=22.34 E-value=1e+02 Score=26.90 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 128 KPVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 128 ~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
..+++.|.+.+..+=.+.|-|.|+.++..+|.
T Consensus 99 ~Gv~kaL~e~gl~p~~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 99 LGVVKALWLRGLLPRIITGTATGALIAALVGV 130 (391)
T ss_pred HHHHHHHHHcCCCCceEEEecHHHHHHHHHHc
Confidence 35667777777666679999999999999884
No 366
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=22.32 E-value=94 Score=25.94 Aligned_cols=17 Identities=24% Similarity=0.171 Sum_probs=15.0
Q ss_pred EEEEEeccHHHHHHhhc
Q 024721 143 GAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 143 ~~~G~S~Gg~~a~~~a~ 159 (263)
.+.|-|.||.+++.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999874
No 367
>COG4594 FecB ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=22.25 E-value=2.4e+02 Score=23.12 Aligned_cols=20 Identities=15% Similarity=0.396 Sum_probs=14.2
Q ss_pred hhhhhcccccEEEEecCCCC
Q 024721 176 EDEIKVVKVPIAVLGAERDN 195 (263)
Q Consensus 176 ~~~~~~~~~p~l~i~G~~D~ 195 (263)
.+++..+...++++.-.+|.
T Consensus 235 lEqLa~~nPd~mil~t~~d~ 254 (310)
T COG4594 235 LEQLAAINPDVMILATYRDE 254 (310)
T ss_pred HHHHhcCCCCEEEEEecCch
Confidence 46788888877777665554
No 368
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=22.17 E-value=1.5e+02 Score=26.20 Aligned_cols=68 Identities=12% Similarity=0.014 Sum_probs=39.9
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccC-CCCChhh-hhHHHHHHHHHHHHHHHHh
Q 024721 184 VPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRY-FVNDTFA-VNSAAEAHEDMINWFEKHV 259 (263)
Q Consensus 184 ~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~-~~~~~~~~~~~~~fl~~~l 259 (263)
..+++-+|.-|++.--.. .+.+ ...+-.++.+++.|-...+. ++.+++. .++++...+.|-.|++..-
T Consensus 416 SNiIFSNG~LDPWSGGGV----~~ni----s~svvav~~k~GAHHlDLR~~~~~DP~~v~~aR~~Ei~iI~~WI~~~~ 485 (492)
T KOG2183|consen 416 SNIIFSNGLLDPWSGGGV----LKNI----SDSVVAVTIKEGAHHLDLRASHPEDPESVVEARELEIQIIKKWIKEFY 485 (492)
T ss_pred cceeeeCCCcCCccCcCe----eccc----cCcEEEEEecCCccceeccCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 367888898898764331 2222 11344445555566564443 3444433 5677888888899997653
No 369
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=22.12 E-value=3.1e+02 Score=19.71 Aligned_cols=59 Identities=19% Similarity=0.242 Sum_probs=38.7
Q ss_pred hhhHHHHHHHHhC-CCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHH---hc--CCCeEEEEEEe
Q 024721 75 PIYRSVADKVAGA-GFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALK---EK--GVSAVGAAGFC 148 (263)
Q Consensus 75 ~~~~~~~~~l~~~-G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~---~~--~~~~i~~~G~S 148 (263)
+.+..+.+.+.+. ++.+.+|.|.++-+ ..++.++|++. .. ..+.+++++.|
T Consensus 59 d~~~~~~~~l~~aD~iI~~sP~y~~~~s-----------------------~~lK~~lD~~~~~~~~~~~~K~~~~i~~~ 115 (152)
T PF03358_consen 59 DDVQELYDKLKEADGIIFASPVYNGSVS-----------------------GQLKNFLDRLSCWFRRALRGKPVAIIAVG 115 (152)
T ss_dssp HHHHHHHHHHHHSSEEEEEEEEBTTBE------------------------HHHHHHHHTHHHTHTTTTTTSEEEEEEEE
T ss_pred HHHHHHHhceecCCeEEEeecEEcCcCC-----------------------hhhhHHHHHhccccccccCCCEEEEEEEe
Confidence 4667788888776 79999999943222 57788888885 22 45577777666
Q ss_pred ---ccHHHHHH
Q 024721 149 ---WGGKVAVK 156 (263)
Q Consensus 149 ---~Gg~~a~~ 156 (263)
.|+..+..
T Consensus 116 g~~~g~~~~~~ 126 (152)
T PF03358_consen 116 GGRRGGLRALE 126 (152)
T ss_dssp SSSSTTHHHHH
T ss_pred cCCcHHHHHHH
Confidence 34444443
No 370
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=22.06 E-value=4e+02 Score=21.72 Aligned_cols=51 Identities=10% Similarity=0.283 Sum_probs=34.0
Q ss_pred EEEecccC-CCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCC
Q 024721 64 LMISDIYG-DEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGV 139 (263)
Q Consensus 64 v~~h~~~g-~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 139 (263)
++++|..| +++...+.+...++..|.+++-++- ..+.++..+++.++..+.
T Consensus 55 vLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k-------------------------~~L~~l~~l~~~l~~~~~ 106 (249)
T PF05673_consen 55 VLLWGARGTGKSSLVKALLNEYADQGLRLIEVSK-------------------------EDLGDLPELLDLLRDRPY 106 (249)
T ss_pred eEEecCCCCCHHHHHHHHHHHHhhcCceEEEECH-------------------------HHhccHHHHHHHHhcCCC
Confidence 44465555 3345667788889999988887764 123577777888776543
No 371
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=21.96 E-value=1.2e+02 Score=24.45 Aligned_cols=23 Identities=13% Similarity=0.056 Sum_probs=19.2
Q ss_pred chhhHHHHHHHHhCCCEEEeecC
Q 024721 74 PPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 74 ~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+..-..++..|+++|+.|+++|.
T Consensus 14 TT~a~nLA~~la~~G~rvlliD~ 36 (267)
T cd02032 14 STTSSNLSVALAKRGKKVLQIGC 36 (267)
T ss_pred HHHHHHHHHHHHHCCCcEEEEec
Confidence 34456788999999999999998
No 372
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=21.94 E-value=1.7e+02 Score=25.40 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=23.3
Q ss_pred eEEEEeccc-C-CCchhhHHHHHHHHhCCCEEEeecC
Q 024721 62 AVLMISDIY-G-DEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 62 ~vv~~h~~~-g-~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
.+|.+...- | +++..-..++..|+..|+.|+++|.
T Consensus 105 ~vI~v~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~ 141 (387)
T TIGR03453 105 QVIAVTNFKGGSGKTTTAAHLAQYLALRGYRVLAIDL 141 (387)
T ss_pred eEEEEEccCCCcCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 455554222 2 2233456778889999999999998
No 373
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=21.79 E-value=1.1e+02 Score=24.19 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=23.1
Q ss_pred CCeeEEEEecccCCCchhhHHHHHHHHhCCCE-EEeecC
Q 024721 59 SKKAVLMISDIYGDEPPIYRSVADKVAGAGFL-VVAPDF 96 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~~~~~~~~~~~l~~~G~~-vv~~d~ 96 (263)
..+.|+++.-..+........+.+.|.+.|+. +..++.
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~ 66 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVI 66 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEecc
Confidence 34556776655554334556677778777874 555554
No 374
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=21.78 E-value=2.9e+02 Score=19.25 Aligned_cols=23 Identities=13% Similarity=0.057 Sum_probs=18.6
Q ss_pred hhhHHHHHHHHhCCCEEEeecCC
Q 024721 75 PIYRSVADKVAGAGFLVVAPDFF 97 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~~d~~ 97 (263)
.....+++.|.++||.|......
T Consensus 11 ~~~~~~~~~L~~~g~~V~ii~~~ 33 (139)
T PF13477_consen 11 TFIYNLAKELKKRGYDVHIITPR 33 (139)
T ss_pred HHHHHHHHHHHHCCCEEEEEEcC
Confidence 35567899999999999988873
No 375
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=21.71 E-value=1.5e+02 Score=25.83 Aligned_cols=36 Identities=14% Similarity=0.048 Sum_probs=24.6
Q ss_pred CeeEEEEe---cccCCCchhhHHHHHHHHhCCCEEEeecC
Q 024721 60 KKAVLMIS---DIYGDEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 60 ~~~vv~~h---~~~g~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
.+.||.+. ||-|- ...-..++..|+.+|+.|+++|.
T Consensus 105 ~~~vIai~n~KGGVGK-TT~a~nLA~~LA~~G~rVLlID~ 143 (388)
T PRK13705 105 FPPVIGVAAHKGGVYK-TSVSVHLAQDLALKGLRVLLVEG 143 (388)
T ss_pred CCeEEEEECCCCCchH-HHHHHHHHHHHHhcCCCeEEEcC
Confidence 34455555 33333 33456788899999999999995
No 376
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=21.68 E-value=1.6e+02 Score=21.70 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=18.7
Q ss_pred hhhHHHHHHHHhCCCEEEeecC
Q 024721 75 PIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
..-..++..++++|+.|+.+|.
T Consensus 15 t~a~~la~~l~~~g~~vllvD~ 36 (179)
T cd02036 15 TTTANLGTALAQLGYKVVLIDA 36 (179)
T ss_pred HHHHHHHHHHHhCCCeEEEEeC
Confidence 4456788899999999999987
No 377
>PRK13236 nitrogenase reductase; Reviewed
Probab=21.32 E-value=1.4e+02 Score=24.79 Aligned_cols=34 Identities=9% Similarity=0.061 Sum_probs=23.5
Q ss_pred EEEEecccC-CCchhhHHHHHHHHhCCCEEEeecC
Q 024721 63 VLMISDIYG-DEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 63 vv~~h~~~g-~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
+|-+.|=.| +++..-..++-.|+++|+.|+.+|.
T Consensus 8 ~~~~~GKGGVGKTt~a~NLA~~La~~G~rVLliD~ 42 (296)
T PRK13236 8 QIAFYGKGGIGKSTTSQNTLAAMAEMGQRILIVGC 42 (296)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 444454333 3333456688899999999999998
No 378
>PLN00180 NDF6 (NDH-dependent flow 6); Provisional
Probab=21.03 E-value=2e+02 Score=21.36 Aligned_cols=59 Identities=17% Similarity=0.154 Sum_probs=32.9
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCccccccCCCCChhhhhHHHHHHH-HHHHHHHHHhhh
Q 024721 185 PIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVRYFVNDTFAVNSAAEAHE-DMINWFEKHVKC 261 (263)
Q Consensus 185 p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~-~~~~fl~~~l~~ 261 (263)
=++++..-+|++...+..+ . .|.+ |.+|.+.. ..+.....++++.|+ ++++=+.+.+++
T Consensus 111 G~~fFgSmKDPfYDSe~YR-------g-dGGD-------GT~hW~Yd---~QEd~E~sAReeL~REELiEEIEQkVGG 170 (180)
T PLN00180 111 GCLFFGSMKDPFYDSEEYR-------G-DGGD-------GTGHWVYE---RQEDIEESARAELWREELIEEIEQKVGG 170 (180)
T ss_pred HHhheeccCCcccchHHhc-------c-cCCC-------CceeeEee---hHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3677888899887655432 2 2222 66776632 223333355555554 566666665543
No 379
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=20.98 E-value=41 Score=25.65 Aligned_cols=34 Identities=15% Similarity=0.232 Sum_probs=27.6
Q ss_pred cccccHHHHHHHHHhcCCCeEEEEEEeccHHHHHHhh
Q 024721 122 KGYEDAKPVIAALKEKGVSAVGAAGFCWGGKVAVKLA 158 (263)
Q Consensus 122 ~~~~d~~~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a 158 (263)
.+.+.+..+++|.+++. ...+|.|||+..++.++
T Consensus 82 ~Yw~El~~i~dwa~~~v---~stl~iCWgaqaal~~~ 115 (175)
T cd03131 82 DYWEELTEILDWAKTHV---TSTLFSCWAAMAALYYF 115 (175)
T ss_pred chHHHHHHHHHHHHHhC---cchHHHHHHHHHHHHHH
Confidence 34467999999998764 56888899999999876
No 380
>PRK13835 conjugal transfer protein TrbH; Provisional
Probab=20.94 E-value=63 Score=23.75 Aligned_cols=19 Identities=26% Similarity=0.538 Sum_probs=15.9
Q ss_pred hhhHHHHHHHHhCCCEEEe
Q 024721 75 PIYRSVADKVAGAGFLVVA 93 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~ 93 (263)
++-..+...|..+||.|+.
T Consensus 69 ~Fg~aL~~aLr~~GYaVvt 87 (145)
T PRK13835 69 PFGQALEAALKGWGYAVVT 87 (145)
T ss_pred HHHHHHHHHHHhcCeEEee
Confidence 5667788889999999997
No 381
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=20.87 E-value=1.1e+02 Score=25.55 Aligned_cols=31 Identities=29% Similarity=0.246 Sum_probs=23.0
Q ss_pred HHHHHHHhcCCCeEEEEEEeccHHHHHHhhc
Q 024721 129 PVIAALKEKGVSAVGAAGFCWGGKVAVKLAS 159 (263)
Q Consensus 129 ~~~~~l~~~~~~~i~~~G~S~Gg~~a~~~a~ 159 (263)
.+++.+.+.+..+=.+.|.|.|+.++..++.
T Consensus 86 Gvl~aL~e~~l~~~~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 86 GVVKALWEQDLLPRVISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHHcCCCCCEEEEEcHHHHHHHHHHc
Confidence 4555665555555579999999999998873
No 382
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=20.80 E-value=4.7e+02 Score=22.53 Aligned_cols=63 Identities=17% Similarity=0.155 Sum_probs=38.0
Q ss_pred EEEEecccCCCchhhHHHHHHHHhCCCEEEeecCCCCCCCCCCCCCcchhhhhhcCCCccccccHHHHHHHHHhcCCCeE
Q 024721 63 VLMISDIYGDEPPIYRSVADKVAGAGFLVVAPDFFHGDAANPSNPKYDKDTWRKNHTTDKGYEDAKPVIAALKEKGVSAV 142 (263)
Q Consensus 63 vv~~h~~~g~~~~~~~~~~~~l~~~G~~vv~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 142 (263)
++++.+..-.....+..+.+.|.+.|..+..++-..+.+ ..+.+..+++.+++.+.+-|
T Consensus 26 ~livt~~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p---------------------~~~~v~~~~~~~~~~~~D~I 84 (375)
T cd08194 26 PLIVTDKVMVKLGLVDKLTDSLKKEGIESAIFDDVVSEP---------------------TDESVEEGVKLAKEGGCDVI 84 (375)
T ss_pred EEEEcCcchhhcchHHHHHHHHHHCCCeEEEECCCCCCc---------------------CHHHHHHHHHHHHhcCCCEE
Confidence 445554322222356778888888898877776422221 13677788888877776655
Q ss_pred EEEE
Q 024721 143 GAAG 146 (263)
Q Consensus 143 ~~~G 146 (263)
.-+|
T Consensus 85 IaiG 88 (375)
T cd08194 85 IALG 88 (375)
T ss_pred EEeC
Confidence 5553
No 383
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=20.54 E-value=1.5e+02 Score=24.11 Aligned_cols=22 Identities=18% Similarity=0.160 Sum_probs=19.0
Q ss_pred hhhHHHHHHHHhCCCEEEeecC
Q 024721 75 PIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 75 ~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
..-..++..|+++|+.|+.+|.
T Consensus 15 T~a~nLA~~La~~G~~VlliD~ 36 (275)
T TIGR01287 15 TTTQNIAAALAEMGKKVMIVGC 36 (275)
T ss_pred HHHHHHHHHHHHCCCeEEEEeC
Confidence 4457789999999999999998
No 384
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=20.45 E-value=2.1e+02 Score=24.41 Aligned_cols=35 Identities=14% Similarity=0.084 Sum_probs=23.2
Q ss_pred eEEEEecccC-CCchhhHHHHHHHHhCCCEEEeecC
Q 024721 62 AVLMISDIYG-DEPPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 62 ~vv~~h~~~g-~~~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
.+|.+.+-.| +++..-..++..|++.|+.|+.+|.
T Consensus 32 ~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~ 67 (329)
T cd02033 32 QIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGC 67 (329)
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 3555554333 2223446678889999999999887
No 385
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=20.35 E-value=2.1e+02 Score=25.15 Aligned_cols=41 Identities=12% Similarity=-0.037 Sum_probs=23.4
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHHHcCCCCceeEEEcCCCCcccccc
Q 024721 184 VPIAVLGAERDNGLPPAQMKRFDEILYAKPKFDHLVKTYPGVCHGWTVR 232 (263)
Q Consensus 184 ~p~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~ 232 (263)
..+++.+|+.|++..-.. .+. ........++||++|-.-..
T Consensus 377 tnviFtNG~~DPW~~lgv----~~~----~~~~~~~~~I~g~~Hc~Dl~ 417 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGV----TSD----SSDSVPAIVIPGGAHCSDLY 417 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-----SSSSEEEEEETT--TTGGGS
T ss_pred CeEEeeCCCCCCcccccC----CCC----CCCCcccEEECCCeeecccc
Confidence 479999999999865441 111 12245567889999976433
No 386
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=20.33 E-value=1.8e+02 Score=25.85 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=27.2
Q ss_pred CCeeEEEEecccCCC-chhhHHHHHHHHhCCCEEEeecC
Q 024721 59 SKKAVLMISDIYGDE-PPIYRSVADKVAGAGFLVVAPDF 96 (263)
Q Consensus 59 ~~~~vv~~h~~~g~~-~~~~~~~~~~l~~~G~~vv~~d~ 96 (263)
.+|.+|++.|..|.. +.....++.++.++|+.|..++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 346788888877743 34556788888888988777654
No 387
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=20.05 E-value=1.5e+02 Score=23.37 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=13.8
Q ss_pred HHHHHhCCCEEEeecC
Q 024721 81 ADKVAGAGFLVVAPDF 96 (263)
Q Consensus 81 ~~~l~~~G~~vv~~d~ 96 (263)
+..|+++||.|+.+|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 5567789999999998
Done!