Query 024723
Match_columns 263
No_of_seqs 123 out of 1129
Neff 8.6
Searched_HMMs 13730
Date Mon Mar 25 13:20:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024723.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024723hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a65a1 f.54.1.1 (A:5-513) Na( 35.6 1.1E+02 0.0083 25.2 18.0 29 41-69 236-264 (509)
2 d1r3jc_ f.14.1.1 (C:) Potassiu 16.4 1E+02 0.0074 19.3 4.6 30 128-157 66-95 (103)
3 d1wpga4 f.33.1.1 (A:1-124,A:24 14.4 2.6E+02 0.019 22.5 8.0 18 180-197 421-438 (472)
4 d1q90r_ f.23.12.1 (R:) ISP sub 9.7 1.3E+02 0.0098 15.6 3.4 17 198-214 19-35 (39)
5 d2h8pc1 f.14.1.1 (C:22-78) Pot 6.1 1.2E+02 0.0089 17.1 1.6 41 83-124 6-46 (57)
6 d1h9aa1 c.2.1.3 (A:1-181,A:413 5.2 81 0.0059 22.7 0.5 30 190-219 4-33 (195)
7 d1gpua1 c.36.1.10 (A:3-337) Tr 3.8 1.7E+02 0.012 22.8 1.6 39 66-104 43-81 (335)
8 d2axtm1 f.23.35.1 (M:1-36) Pho 3.7 3.1E+02 0.023 13.7 2.5 16 203-218 11-26 (36)
9 d1ciya3 f.1.3.1 (A:33-255) del 3.5 3.8E+02 0.027 19.1 3.3 28 174-201 6-33 (223)
10 d1qkia1 c.2.1.3 (A:12-199,A:43 3.4 2.4E+02 0.017 20.2 1.9 26 194-219 23-48 (203)
No 1
>d2a65a1 f.54.1.1 (A:5-513) Na(+):neurotransmitter symporter homologue LeuT {Aquifex aeolicus [TaxId: 63363]}
Probab=35.62 E-value=1.1e+02 Score=25.21 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=20.8
Q ss_pred cHHHHHHHHHHHHHHhcCccchhhhhhcC
Q 024723 41 TVFNFFSALGDVAFAYAGHNVVLEIQATI 69 (263)
Q Consensus 41 ~~~~~~~~~~~~~faf~~~~~~~~i~~~m 69 (263)
+..-...|.+...|+.+.-.-....+.+.
T Consensus 236 ~~~vW~~A~~Q~ffSlgiG~G~~i~~~Sy 264 (509)
T d2a65a1 236 DPGVWIAAVGQIFFTLSLGFGAIITYASY 264 (509)
T ss_dssp CHHHHHHHHHHHHHHHTTTSSHHHHHHTT
T ss_pred ChHHHHHHHHHHhhhhcccCCceeeehhh
Confidence 33445779999999998766666666664
No 2
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=16.36 E-value=1e+02 Score=19.35 Aligned_cols=30 Identities=7% Similarity=0.113 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHHh
Q 024723 128 MANFFVVVHVIGSYQIYAMPVFDMIETLLV 157 (263)
Q Consensus 128 ~~~~~~~i~~~~s~pl~~~p~~~~~~~~~~ 157 (263)
..|+...+..+.+..+...+.....+....
T Consensus 66 ~gr~~~~~~~~~Gi~~~~~~~~~i~~~~~~ 95 (103)
T d1r3jc_ 66 WGRCVAVVVMVAGITSFGLVTAALATWFVG 95 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555556655555555444444443
No 3
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=14.39 E-value=2.6e+02 Score=22.49 Aligned_cols=18 Identities=6% Similarity=-0.025 Sum_probs=11.1
Q ss_pred HHHHHhhcCChhHHHHhh
Q 024723 180 TMFIGITFPFFGGLLGFF 197 (263)
Q Consensus 180 ~~~vA~~ip~~~~v~~lv 197 (263)
..+....+|.++.+++..
T Consensus 421 l~~~i~yiP~l~~vf~~~ 438 (472)
T d1wpga4 421 LHFLILYVDPLPMIFKLK 438 (472)
T ss_dssp HHHHHHHSTTTHHHHTCC
T ss_pred HHHHHHHhhHHHHHHccc
Confidence 334446688887766553
No 4
>d1q90r_ f.23.12.1 (R:) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=9.75 E-value=1.3e+02 Score=15.60 Aligned_cols=17 Identities=29% Similarity=0.276 Sum_probs=8.8
Q ss_pred hhhhhhhHHHhHhHHHH
Q 024723 198 GGFAFAPTTYFLPCIIW 214 (263)
Q Consensus 198 Gs~~~~~l~~i~P~l~~ 214 (263)
|+.+........|-.-|
T Consensus 19 G~~~~~~~g~l~py~~f 35 (39)
T d1q90r_ 19 GGAGLPITTLALGYGAF 35 (39)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hccchhhhhhccceeEE
Confidence 55555555555554433
No 5
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=6.05 E-value=1.2e+02 Score=17.13 Aligned_cols=41 Identities=10% Similarity=0.240 Sum_probs=22.1
Q ss_pred chhhhHHHHHHHHHHhhhhhhhhhccccchhhhhhCCCCchH
Q 024723 83 RGVVVAYIVVALCYFPVALIGYWMFGNKVEDNILLSLEKPTW 124 (263)
Q Consensus 83 ~~~~~s~~~~~i~Y~~~g~~gy~~fG~~~~~~il~nl~~~~~ 124 (263)
|.+..+..+..+.-.+.+...|..=.+. +++-+.++|+.-|
T Consensus 6 R~~~~~~~~~~i~i~~~s~~~y~~E~~~-~~~~f~sip~a~W 46 (57)
T d2h8pc1 6 RAAGAATVLLVIVLLAGSYLAVLAERGA-PGAQLITYPRALW 46 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCccccccchhhh
Confidence 3444455555555556677777775544 3333456664433
No 6
>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}
Probab=5.17 E-value=81 Score=22.73 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=24.4
Q ss_pred hhHHHHhhhhhhhhhHHHhHhHHHHHHHhC
Q 024723 190 FGGLLGFFGGFAFAPTTYFLPCIIWLAIYK 219 (263)
Q Consensus 190 ~~~v~~lvGs~~~~~l~~i~P~l~~l~~~~ 219 (263)
..+++-+.||++.-..=-++|+++.+....
T Consensus 4 ~~t~lVIFGaTGDLa~RKL~PAL~~L~~~g 33 (195)
T d1h9aa1 4 IKTLVTFFGGTGDLAKRKLYPSVFNLYKKG 33 (195)
T ss_dssp CCEEEEEETTTSHHHHHTHHHHHHHHHHTT
T ss_pred CceEEEEECcccHHHHhHHHHHHHHHHHcC
Confidence 344556779999999999999999998754
No 7
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.83 E-value=1.7e+02 Score=22.82 Aligned_cols=39 Identities=28% Similarity=0.230 Sum_probs=21.4
Q ss_pred hhcCCCCCCCCCCCCCcchhhhHHHHHHHHHHhhhhhhh
Q 024723 66 QATIPSTPEKPSKGPMWRGVVVAYIVVALCYFPVALIGY 104 (263)
Q Consensus 66 ~~~m~~~~~~p~~~~~~~~~~~s~~~~~i~Y~~~g~~gy 104 (263)
|+.||..++||+.....+.+...-=.+..+|.+....||
T Consensus 43 y~~~~~~p~~p~~~~rDrfilSkGH~~~~lYa~l~~~G~ 81 (335)
T d1gpua1 43 WSQMRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGY 81 (335)
T ss_dssp HHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHTTC
T ss_pred HHHhccCcCCCCCCCCCeEEEeCcchhHHHHHHHHHhCC
Confidence 344442234454322224444333357788999999998
No 8
>d2axtm1 f.23.35.1 (M:1-36) Photosystem II reaction center protein M, PsbM {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=3.74 E-value=3.1e+02 Score=13.67 Aligned_cols=16 Identities=13% Similarity=0.496 Sum_probs=10.7
Q ss_pred hhHHHhHhHHHHHHHh
Q 024723 203 APTTYFLPCIIWLAIY 218 (263)
Q Consensus 203 ~~l~~i~P~l~~l~~~ 218 (263)
+.+-.+.|..|.+.++
T Consensus 11 t~LFilvPt~FLliLy 26 (36)
T d2axtm1 11 TALFVLVPSVFLIILY 26 (36)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 4566677887766654
No 9
>d1ciya3 f.1.3.1 (A:33-255) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=3.52 E-value=3.8e+02 Score=19.14 Aligned_cols=28 Identities=14% Similarity=0.066 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhhcCChhHHHHhhhhhh
Q 024723 174 NLYVASTMFIGITFPFFGGLLGFFGGFA 201 (263)
Q Consensus 174 ~~~v~~~~~vA~~ip~~~~v~~lvGs~~ 201 (263)
+.+-+...+++.++|..+.++++++-+.
T Consensus 6 i~~~~~~~ll~~~iP~~g~~~~li~~lw 33 (223)
T d1ciya3 6 ISLSLTQFLLSEFVPGAGFVLGLVDIIW 33 (223)
T ss_dssp HHHHHHHHHHHCCSSSHHHHHHHHHHTT
T ss_pred hHHHHHHHHhhhcCCchHHHHHHHHHHc
Confidence 4455677788888999988877665443
No 10
>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.40 E-value=2.4e+02 Score=20.20 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=22.3
Q ss_pred HHhhhhhhhhhHHHhHhHHHHHHHhC
Q 024723 194 LGFFGGFAFAPTTYFLPCIIWLAIYK 219 (263)
Q Consensus 194 ~~lvGs~~~~~l~~i~P~l~~l~~~~ 219 (263)
+-+.||.+.-..=.++|+|+.+....
T Consensus 23 ~VIFGatGDLA~RKL~PALf~L~~~g 48 (203)
T d1qkia1 23 FIIMGASGDLAKKKIYPTIWWLFRDG 48 (203)
T ss_dssp EEEETTTSHHHHHTHHHHHHHHHHTT
T ss_pred EEEECcccHHHHhHHHHHHHHHHHcC
Confidence 45679999999999999999998753
Done!