Query 024724
Match_columns 263
No_of_seqs 173 out of 1473
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 13:21:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024724.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024724hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v0s_A Perakine reductase; AKR 100.0 1.3E-56 4.4E-61 397.7 18.0 258 2-259 10-336 (337)
2 3n2t_A Putative oxidoreductase 100.0 4.6E-53 1.6E-57 376.3 21.5 242 2-245 28-344 (348)
3 1pyf_A IOLS protein; beta-alph 100.0 2E-52 6.7E-57 367.3 24.9 231 2-233 10-310 (312)
4 1pz1_A GSP69, general stress p 100.0 3.3E-52 1.1E-56 368.8 20.6 240 2-242 10-322 (333)
5 3eau_A Voltage-gated potassium 100.0 2.5E-49 8.6E-54 349.6 22.6 231 2-237 12-326 (327)
6 3lut_A Voltage-gated potassium 100.0 1.8E-49 6.1E-54 355.6 20.8 237 2-243 46-366 (367)
7 3erp_A Putative oxidoreductase 100.0 1.1E-48 3.8E-53 348.7 23.2 227 2-232 43-349 (353)
8 3n6q_A YGHZ aldo-keto reductas 100.0 1.3E-48 4.3E-53 347.6 22.8 228 2-234 22-334 (346)
9 1ur3_M Hypothetical oxidoreduc 100.0 1.8E-47 6E-52 336.4 23.0 210 2-237 32-318 (319)
10 1lqa_A TAS protein; TIM barrel 100.0 2.5E-47 8.7E-52 339.2 22.6 229 2-234 10-340 (346)
11 1gve_A Aflatoxin B1 aldehyde r 100.0 1.5E-47 5E-52 338.3 20.7 234 1-242 1-325 (327)
12 3b3d_A YTBE protein, putative 100.0 1.5E-47 5.1E-52 336.2 20.2 195 2-238 48-306 (314)
13 1ynp_A Oxidoreductase, AKR11C1 100.0 4.7E-47 1.6E-51 333.5 22.0 214 2-237 30-312 (317)
14 4gie_A Prostaglandin F synthas 100.0 4.2E-47 1.4E-51 329.9 19.8 197 2-239 21-279 (290)
15 2bp1_A Aflatoxin B1 aldehyde r 100.0 5.4E-47 1.8E-51 338.6 20.8 233 2-242 35-358 (360)
16 4gac_A Alcohol dehydrogenase [ 100.0 5.1E-47 1.7E-51 334.5 20.3 203 1-238 9-298 (324)
17 3up8_A Putative 2,5-diketo-D-g 100.0 1.3E-46 4.4E-51 327.5 20.1 195 2-240 31-289 (298)
18 3f7j_A YVGN protein; aldo-keto 100.0 1.3E-45 4.6E-50 318.3 21.0 193 2-238 14-268 (276)
19 4f40_A Prostaglandin F2-alpha 100.0 3.3E-45 1.1E-49 317.8 21.5 193 2-238 18-280 (288)
20 3b3e_A YVGN protein; aldo-keto 100.0 3E-45 1E-49 320.5 21.0 192 2-237 48-301 (310)
21 3ln3_A Dihydrodiol dehydrogena 100.0 1.4E-44 4.6E-49 318.9 22.6 220 1-251 13-320 (324)
22 3o0k_A Aldo/keto reductase; ss 100.0 5.9E-45 2E-49 315.1 19.4 185 2-231 34-282 (283)
23 1qwk_A Aldose reductase, aldo- 100.0 3.3E-44 1.1E-48 315.5 22.1 211 2-238 13-299 (317)
24 2wzm_A Aldo-keto reductase; ox 100.0 1.4E-44 4.8E-49 312.8 19.1 190 2-236 19-272 (283)
25 3o3r_A Aldo-keto reductase fam 100.0 6.1E-44 2.1E-48 313.7 22.6 206 1-241 9-302 (316)
26 1vbj_A Prostaglandin F synthas 100.0 4.6E-44 1.6E-48 309.3 20.9 191 2-236 17-269 (281)
27 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 7.2E-44 2.5E-48 314.1 22.3 206 2-238 13-306 (323)
28 1hw6_A 2,5-diketo-D-gluconic a 100.0 4.1E-44 1.4E-48 309.4 17.5 191 2-235 11-265 (278)
29 1mzr_A 2,5-diketo-D-gluconate 100.0 1.4E-43 4.8E-48 308.0 19.5 192 2-236 33-286 (296)
30 3buv_A 3-OXO-5-beta-steroid 4- 100.0 2.6E-43 9E-48 310.9 20.8 207 2-238 15-309 (326)
31 1vp5_A 2,5-diketo-D-gluconic a 100.0 2E-43 6.9E-48 307.4 19.3 191 2-235 23-278 (298)
32 1zgd_A Chalcone reductase; pol 100.0 2.2E-43 7.4E-48 309.7 19.5 204 2-242 17-303 (312)
33 3h7u_A Aldo-keto reductase; st 100.0 1.7E-43 5.8E-48 313.0 19.0 205 2-244 33-318 (335)
34 1us0_A Aldose reductase; oxido 100.0 7.9E-43 2.7E-47 306.6 21.3 203 1-238 9-299 (316)
35 1s1p_A Aldo-keto reductase fam 100.0 4.3E-43 1.5E-47 310.1 19.6 205 2-237 13-305 (331)
36 4exb_A Putative uncharacterize 100.0 5.6E-43 1.9E-47 304.0 16.2 177 2-223 39-292 (292)
37 3krb_A Aldose reductase; ssgci 100.0 2.1E-42 7.3E-47 305.9 19.2 202 1-235 21-317 (334)
38 1mi3_A Xylose reductase, XR; a 100.0 4.9E-42 1.7E-46 302.3 19.7 204 2-236 13-308 (322)
39 3h7r_A Aldo-keto reductase; st 100.0 2.7E-42 9.2E-47 304.7 16.4 196 2-239 33-309 (331)
40 2bgs_A Aldose reductase; holoe 100.0 3.8E-41 1.3E-45 298.5 16.9 193 2-238 45-319 (344)
41 3cf4_A Acetyl-COA decarboxylas 96.9 0.00055 1.9E-08 66.4 4.3 104 61-209 259-384 (807)
42 3k13_A 5-methyltetrahydrofolat 82.9 14 0.00047 31.3 11.0 106 24-133 35-145 (300)
43 4f0h_B Ribulose bisphosphate c 81.8 4.9 0.00017 29.8 6.7 72 7-82 2-89 (138)
44 1tx2_A DHPS, dihydropteroate s 80.6 18 0.0006 30.6 10.8 133 25-185 62-201 (297)
45 1rbl_M Ribulose 1,5 bisphospha 78.2 6.1 0.00021 28.1 6.0 70 9-82 10-95 (109)
46 1svd_M Ribulose bisphosphate c 77.6 7.6 0.00026 27.7 6.4 70 9-82 12-97 (110)
47 1bwv_S Rubisco, protein (ribul 76.5 8.1 0.00028 28.7 6.5 72 7-82 2-89 (138)
48 2q02_A Putative cytoplasmic pr 76.2 28 0.00097 27.9 11.7 128 1-181 2-135 (272)
49 1bxn_I Rubisco, protein (ribul 75.9 8 0.00027 28.7 6.3 72 7-82 2-89 (139)
50 3lab_A Putative KDPG (2-keto-3 75.0 12 0.00042 30.0 7.8 87 24-126 23-117 (217)
51 3obe_A Sugar phosphate isomera 74.9 32 0.0011 28.6 11.0 127 7-182 22-166 (305)
52 3l23_A Sugar phosphate isomera 73.8 15 0.00051 30.6 8.5 37 7-47 14-50 (303)
53 2yci_X 5-methyltetrahydrofolat 69.4 43 0.0015 27.7 10.2 98 24-129 32-133 (271)
54 1wdd_S Ribulose bisphosphate c 68.9 16 0.00053 26.8 6.4 70 9-82 11-107 (128)
55 3tr9_A Dihydropteroate synthas 68.4 55 0.0019 27.8 11.6 99 24-128 47-155 (314)
56 1wa3_A 2-keto-3-deoxy-6-phosph 66.8 29 0.00099 26.9 8.4 88 24-126 20-109 (205)
57 2rdx_A Mandelate racemase/muco 65.6 35 0.0012 29.4 9.4 98 24-133 201-300 (379)
58 3ktc_A Xylose isomerase; putat 65.2 12 0.0004 31.7 6.1 44 4-47 6-55 (333)
59 4e38_A Keto-hydroxyglutarate-a 64.9 37 0.0013 27.5 8.7 85 24-126 44-132 (232)
60 4hb7_A Dihydropteroate synthas 64.7 60 0.002 26.9 11.6 99 24-128 28-132 (270)
61 1aj0_A DHPS, dihydropteroate s 64.3 62 0.0021 26.9 15.5 140 24-185 36-182 (282)
62 3q45_A Mandelate racemase/muco 64.1 38 0.0013 29.2 9.2 73 61-133 224-298 (368)
63 3zxw_B Ribulose bisphosphate c 63.5 18 0.00063 26.0 5.8 69 10-82 10-94 (118)
64 3dg3_A Muconate cycloisomerase 63.5 44 0.0015 28.7 9.6 73 61-133 225-298 (367)
65 4h1z_A Enolase Q92ZS5; dehydra 63.0 34 0.0012 30.0 8.9 74 61-134 272-346 (412)
66 1mdl_A Mandelate racemase; iso 62.9 29 0.00099 29.7 8.3 96 24-128 201-298 (359)
67 1f6y_A 5-methyltetrahydrofolat 62.8 63 0.0021 26.5 11.8 101 24-129 23-124 (262)
68 1gk8_I Ribulose bisphosphate c 62.7 15 0.00053 27.2 5.4 70 9-82 11-114 (140)
69 3i4k_A Muconate lactonizing en 62.4 76 0.0026 27.4 10.9 101 24-133 206-308 (383)
70 1ydn_A Hydroxymethylglutaryl-C 62.3 25 0.00085 29.3 7.5 100 23-128 23-140 (295)
71 2nql_A AGR_PAT_674P, isomerase 62.2 15 0.00051 32.0 6.3 101 24-133 220-321 (388)
72 2pgw_A Muconate cycloisomerase 61.0 34 0.0011 29.7 8.4 100 24-132 202-303 (384)
73 3ngj_A Deoxyribose-phosphate a 60.9 23 0.0008 28.8 6.8 28 24-51 155-182 (239)
74 1eye_A DHPS 1, dihydropteroate 59.7 75 0.0026 26.4 14.5 101 23-129 26-132 (280)
75 4a35_A Mitochondrial enolase s 59.0 86 0.0029 27.8 10.8 67 61-127 285-356 (441)
76 1nu5_A Chloromuconate cycloiso 58.9 61 0.0021 27.8 9.6 101 24-133 200-302 (370)
77 3dx5_A Uncharacterized protein 58.1 26 0.00089 28.4 6.9 34 7-46 2-35 (286)
78 3qy7_A Tyrosine-protein phosph 57.8 76 0.0026 25.9 9.9 47 24-70 18-68 (262)
79 3gd6_A Muconate cycloisomerase 57.8 37 0.0013 29.6 8.1 100 24-133 199-301 (391)
80 2ovl_A Putative racemase; stru 57.2 31 0.0011 29.7 7.4 97 24-129 203-301 (371)
81 2gl5_A Putative dehydratase pr 56.5 98 0.0033 26.9 10.7 69 61-129 258-328 (410)
82 2qgy_A Enolase from the enviro 56.1 99 0.0034 26.7 11.3 97 24-129 206-304 (391)
83 2qw5_A Xylose isomerase-like T 55.3 90 0.0031 25.9 11.3 41 7-48 10-53 (335)
84 2poz_A Putative dehydratase; o 55.3 63 0.0022 28.0 9.2 70 61-130 239-310 (392)
85 3ozy_A Putative mandelate race 55.1 61 0.0021 28.1 9.0 68 61-128 235-305 (389)
86 1nvm_A HOA, 4-hydroxy-2-oxoval 54.9 74 0.0025 27.1 9.4 101 22-127 26-139 (345)
87 3p6l_A Sugar phosphate isomera 54.8 78 0.0027 25.1 9.3 33 7-47 11-43 (262)
88 3ndo_A Deoxyribose-phosphate a 54.7 45 0.0015 26.9 7.5 27 24-50 144-170 (231)
89 2ps2_A Putative mandelate race 53.5 37 0.0013 29.2 7.3 98 24-133 202-302 (371)
90 1vp8_A Hypothetical protein AF 53.3 81 0.0028 24.8 9.0 90 38-133 15-110 (201)
91 2qde_A Mandelate racemase/muco 53.1 62 0.0021 28.1 8.8 101 24-133 201-303 (397)
92 3jva_A Dipeptide epimerase; en 52.5 45 0.0015 28.5 7.7 70 61-130 223-294 (354)
93 2o56_A Putative mandelate race 52.4 77 0.0026 27.5 9.3 70 61-130 255-326 (407)
94 1t57_A Conserved protein MTH16 51.7 87 0.003 24.7 9.3 77 54-133 36-117 (206)
95 3mwc_A Mandelate racemase/muco 50.8 81 0.0028 27.5 9.1 73 61-133 244-318 (400)
96 2chr_A Chloromuconate cycloiso 50.8 44 0.0015 28.6 7.4 73 61-133 228-302 (370)
97 2ox4_A Putative mandelate race 50.7 65 0.0022 28.0 8.5 70 61-130 249-320 (403)
98 1tkk_A Similar to chloromucona 50.3 27 0.00093 30.0 5.9 100 24-132 197-300 (366)
99 3fcp_A L-Ala-D/L-Glu epimerase 50.2 1E+02 0.0034 26.6 9.6 73 61-133 233-307 (381)
100 3eez_A Putative mandelate race 49.3 20 0.0007 31.1 5.0 98 24-133 201-300 (378)
101 1mzh_A Deoxyribose-phosphate a 48.7 69 0.0024 25.4 7.7 64 24-92 130-196 (225)
102 3qld_A Mandelate racemase/muco 48.7 90 0.0031 27.1 9.1 73 61-133 229-303 (388)
103 3r12_A Deoxyribose-phosphate a 48.1 82 0.0028 25.9 8.1 28 24-51 171-198 (260)
104 3qxb_A Putative xylose isomera 45.8 1E+02 0.0035 25.3 8.8 40 6-50 20-59 (316)
105 2c35_A Human RPB4, DNA-directe 45.6 24 0.00084 26.5 4.2 62 166-237 88-149 (152)
106 2y5s_A DHPS, dihydropteroate s 45.3 1.3E+02 0.0046 25.0 11.3 141 24-185 44-190 (294)
107 2cw6_A Hydroxymethylglutaryl-C 45.2 1.2E+02 0.0042 25.0 9.1 102 23-127 24-140 (298)
108 3u0h_A Xylose isomerase domain 45.1 49 0.0017 26.5 6.5 33 7-47 5-37 (281)
109 4dwd_A Mandelate racemase/muco 45.1 1.4E+02 0.0048 25.9 9.7 68 61-129 231-300 (393)
110 2p8b_A Mandelate racemase/muco 44.7 67 0.0023 27.5 7.6 72 61-132 226-299 (369)
111 3kws_A Putative sugar isomeras 44.6 1.2E+02 0.0041 24.3 10.5 34 7-48 27-60 (287)
112 2ftp_A Hydroxymethylglutaryl-C 44.6 89 0.0031 26.0 8.1 103 22-127 26-143 (302)
113 1ub3_A Aldolase protein; schif 44.5 95 0.0032 24.7 7.9 28 24-51 131-158 (220)
114 4hpn_A Putative uncharacterize 44.5 1.4E+02 0.0049 25.4 9.7 67 61-127 228-296 (378)
115 3uj2_A Enolase 1; enzyme funct 43.7 1.3E+02 0.0045 26.7 9.4 66 61-126 319-389 (449)
116 2og9_A Mandelate racemase/muco 43.5 1.1E+02 0.0038 26.4 8.9 96 24-128 219-316 (393)
117 3bjs_A Mandelate racemase/muco 43.5 1.7E+02 0.0058 25.6 11.0 95 24-127 241-338 (428)
118 3h87_C Putative uncharacterize 43.2 67 0.0023 20.9 5.7 57 166-226 12-69 (73)
119 3dgb_A Muconate cycloisomerase 43.0 1E+02 0.0034 26.6 8.5 73 61-133 234-308 (382)
120 2qq6_A Mandelate racemase/muco 41.7 93 0.0032 27.1 8.1 70 61-130 250-321 (410)
121 1vcv_A Probable deoxyribose-ph 41.7 1.1E+02 0.0037 24.5 7.8 27 24-50 126-152 (226)
122 3i6e_A Muconate cycloisomerase 41.5 76 0.0026 27.4 7.4 73 61-133 232-306 (385)
123 3t7y_A YOP proteins translocat 41.2 11 0.00038 26.1 1.6 25 111-135 45-69 (97)
124 3mkc_A Racemase; metabolic pro 41.1 1.3E+02 0.0045 26.0 8.9 68 61-128 246-315 (394)
125 2pp0_A L-talarate/galactarate 41.0 1.3E+02 0.0043 26.1 8.8 96 24-128 232-329 (398)
126 2zad_A Muconate cycloisomerase 40.7 1.4E+02 0.0047 25.2 8.9 100 24-132 194-296 (345)
127 3go2_A Putative L-alanine-DL-g 40.6 82 0.0028 27.5 7.5 67 61-127 251-318 (409)
128 2gdq_A YITF; mandelate racemas 40.4 1.2E+02 0.0042 26.0 8.6 95 24-127 196-293 (382)
129 4e8g_A Enolase, mandelate race 40.4 27 0.00091 30.6 4.3 73 61-133 247-321 (391)
130 2akz_A Gamma enolase, neural; 40.3 1.7E+02 0.0059 25.9 9.6 66 61-126 300-368 (439)
131 3dip_A Enolase; structural gen 40.3 1.9E+02 0.0063 25.2 10.4 97 24-129 225-324 (410)
132 3r0u_A Enzyme of enolase super 39.8 1.1E+02 0.0037 26.4 8.2 101 24-133 198-302 (379)
133 1rvk_A Isomerase/lactonizing e 39.6 1.8E+02 0.0061 24.8 9.6 67 61-127 240-309 (382)
134 3ekg_A Mandelate racemase/muco 39.5 1.9E+02 0.0065 25.2 9.7 68 61-128 250-321 (404)
135 3vnd_A TSA, tryptophan synthas 39.1 1.4E+02 0.0047 24.5 8.2 100 24-125 30-152 (267)
136 2hzg_A Mandelate racemase/muco 38.9 1.1E+02 0.0037 26.5 8.0 67 61-127 235-304 (401)
137 4dye_A Isomerase; enolase fami 38.9 50 0.0017 28.9 5.8 96 24-130 224-321 (398)
138 1chr_A Chloromuconate cycloiso 38.5 1.8E+02 0.0063 24.7 10.9 73 61-133 228-302 (370)
139 2a6c_A Helix-turn-helix motif; 38.5 34 0.0011 22.2 3.7 32 163-194 15-46 (83)
140 1zs4_A Regulatory protein CII; 37.6 88 0.003 20.9 5.5 47 172-231 28-74 (83)
141 3r4e_A Mandelate racemase/muco 37.6 99 0.0034 27.1 7.6 70 61-130 260-331 (418)
142 3mqt_A Mandelate racemase/muco 37.2 1.2E+02 0.0042 26.2 8.1 69 61-129 241-311 (394)
143 3ik4_A Mandelate racemase/muco 37.0 84 0.0029 26.9 6.9 72 61-133 229-302 (365)
144 3bzy_B ESCU; auto cleavage pro 36.7 12 0.00042 25.1 1.1 25 111-135 30-54 (83)
145 2hk0_A D-psicose 3-epimerase; 36.7 1.7E+02 0.0058 23.8 9.5 36 7-47 22-57 (309)
146 3v3w_A Starvation sensing prot 36.6 1.2E+02 0.004 26.7 7.9 70 61-130 266-337 (424)
147 1nsj_A PRAI, phosphoribosyl an 36.2 71 0.0024 25.1 5.8 32 71-102 52-84 (205)
148 3c01_E Surface presentation of 36.0 13 0.00046 25.8 1.3 25 111-135 30-54 (98)
149 3oa3_A Aldolase; structural ge 35.9 1.4E+02 0.0049 24.9 7.8 89 24-125 186-280 (288)
150 3kz3_A Repressor protein CI; f 35.8 38 0.0013 21.6 3.6 54 165-218 11-66 (80)
151 3szu_A ISPH, 4-hydroxy-3-methy 35.8 74 0.0025 27.1 6.1 44 169-213 241-290 (328)
152 3rr1_A GALD, putative D-galact 35.7 2.1E+02 0.0071 24.9 9.4 69 61-129 218-288 (405)
153 3cqj_A L-ribulose-5-phosphate 35.7 1.7E+02 0.0059 23.5 9.0 36 7-49 18-53 (295)
154 3lmz_A Putative sugar isomeras 35.6 1.3E+02 0.0046 23.6 7.7 34 7-48 19-52 (257)
155 3sjn_A Mandelate racemase/muco 34.4 1.3E+02 0.0045 25.8 7.8 69 61-129 234-304 (374)
156 4e5t_A Mandelate racemase / mu 34.3 2.3E+02 0.0078 24.5 9.5 68 61-128 248-317 (404)
157 1sjd_A N-acylamino acid racema 34.3 1.3E+02 0.0045 25.5 7.8 72 61-132 222-295 (368)
158 3tha_A Tryptophan synthase alp 33.9 1.2E+02 0.0042 24.6 7.0 88 24-122 26-117 (252)
159 3tj4_A Mandelate racemase; eno 33.8 2.2E+02 0.0076 24.2 9.7 68 61-128 237-306 (372)
160 1y14_A B32, RPB4, DNA-directed 33.7 57 0.002 25.4 4.7 59 167-235 125-183 (187)
161 3toy_A Mandelate racemase/muco 33.7 1.9E+02 0.0065 24.9 8.7 97 24-129 225-323 (383)
162 2cpg_A REPA protein, transcrip 33.6 57 0.0019 18.2 3.7 24 165-188 11-34 (45)
163 3stp_A Galactonate dehydratase 33.5 1.8E+02 0.006 25.5 8.5 96 24-128 242-339 (412)
164 3vcn_A Mannonate dehydratase; 33.2 1.1E+02 0.0039 26.8 7.3 70 61-130 267-338 (425)
165 3sbf_A Mandelate racemase / mu 33.2 1.7E+02 0.006 25.3 8.4 70 61-130 241-312 (401)
166 2vt1_B Surface presentation of 33.1 10 0.00035 26.2 0.3 25 111-135 30-54 (93)
167 4abx_A DNA repair protein RECN 33.0 29 0.00098 26.6 2.9 28 159-186 122-149 (175)
168 1vhc_A Putative KHG/KDPG aldol 32.8 1.2E+02 0.0042 24.1 6.8 87 24-126 27-115 (224)
169 2yw3_A 4-hydroxy-2-oxoglutarat 32.7 1.6E+02 0.0056 22.8 7.5 87 24-126 23-109 (207)
170 1kko_A 3-methylaspartate ammon 32.3 1.1E+02 0.0039 26.7 7.1 70 61-130 285-361 (413)
171 3v5c_A Mandelate racemase/muco 32.1 73 0.0025 27.7 5.7 68 61-129 240-313 (392)
172 3lqv_P Splicing factor 3B subu 32.0 42 0.0014 19.0 2.6 17 212-228 15-31 (39)
173 4djd_D C/Fe-SP, corrinoid/iron 31.8 1.8E+02 0.006 24.7 7.9 92 28-129 82-188 (323)
174 3ro6_B Putative chloromuconate 31.6 92 0.0031 26.5 6.3 101 24-133 196-299 (356)
175 3vni_A Xylose isomerase domain 31.1 2E+02 0.0069 22.9 11.7 36 7-47 3-38 (294)
176 2oz8_A MLL7089 protein; struct 30.9 2.5E+02 0.0087 24.0 11.4 91 24-127 202-296 (389)
177 3hgj_A Chromate reductase; TIM 30.4 1.4E+02 0.0049 25.3 7.3 75 24-100 237-317 (349)
178 3ddm_A Putative mandelate race 30.4 2.6E+02 0.009 24.0 9.5 96 24-127 211-308 (392)
179 3fv9_G Mandelate racemase/muco 30.2 63 0.0021 28.0 5.0 98 24-133 206-306 (386)
180 2k9i_A Plasmid PRN1, complete 30.2 65 0.0022 18.8 3.7 25 165-189 18-42 (55)
181 3b1s_B Flagellar biosynthetic 36.1 11 0.00038 25.6 0.0 27 111-137 30-56 (87)
182 3u9i_A Mandelate racemase/muco 29.9 1.2E+02 0.0042 26.3 6.8 72 61-133 259-332 (393)
183 3na8_A Putative dihydrodipicol 29.6 2.5E+02 0.0085 23.5 11.4 187 7-232 95-309 (315)
184 1r0m_A N-acylamino acid racema 29.5 2.6E+02 0.0089 23.7 9.7 72 61-132 228-301 (375)
185 3ugv_A Enolase; enzyme functio 29.2 2E+02 0.0069 24.8 8.1 69 61-129 259-329 (390)
186 1i60_A IOLI protein; beta barr 29.1 2.1E+02 0.0071 22.5 9.3 125 7-181 2-138 (278)
187 4dxk_A Mandelate racemase / mu 29.0 2.1E+02 0.0071 24.8 8.2 70 61-130 250-321 (400)
188 4hnl_A Mandelate racemase/muco 28.8 98 0.0034 27.1 6.1 71 61-131 261-333 (421)
189 1kcz_A Beta-methylaspartase; b 28.8 1.3E+02 0.0043 26.3 6.7 68 61-128 285-359 (413)
190 3kws_A Putative sugar isomeras 28.8 1.7E+02 0.0057 23.5 7.2 54 74-128 26-84 (287)
191 3tcs_A Racemase, putative; PSI 28.7 2.8E+02 0.0096 23.9 9.0 69 61-129 239-309 (388)
192 2nx9_A Oxaloacetate decarboxyl 28.6 2.9E+02 0.01 24.6 9.1 105 24-131 28-150 (464)
193 2vp8_A Dihydropteroate synthas 28.5 2.7E+02 0.0091 23.5 10.4 99 24-129 63-168 (318)
194 3dnf_A ISPH, LYTB, 4-hydroxy-3 28.4 56 0.0019 27.5 4.1 44 169-213 225-274 (297)
195 2hxt_A L-fuconate dehydratase; 28.4 2.2E+02 0.0075 24.9 8.3 67 61-127 282-351 (441)
196 3qtp_A Enolase 1; glycolysis, 28.3 3.2E+02 0.011 24.3 11.0 66 61-126 309-378 (441)
197 1vyr_A Pentaerythritol tetrani 28.3 1.5E+02 0.0053 25.3 7.1 73 24-100 249-322 (364)
198 3b7h_A Prophage LP1 protein 11 28.2 29 0.00099 21.8 1.9 28 167-194 8-35 (78)
199 1x7f_A Outer surface protein; 28.1 3E+02 0.01 23.9 11.7 37 24-60 39-75 (385)
200 2an7_A Protein PARD; bacterial 28.0 1.3E+02 0.0046 19.9 5.0 25 167-191 12-36 (83)
201 4hv0_A AVTR; ribbon-helix-heli 27.6 80 0.0027 21.9 4.0 25 167-191 9-33 (106)
202 1wbh_A KHG/KDPG aldolase; lyas 27.5 2.2E+02 0.0076 22.2 8.6 86 24-126 26-114 (214)
203 2p0o_A Hypothetical protein DU 27.4 3E+02 0.01 23.8 13.4 159 24-214 15-236 (372)
204 3by5_A Cobalamin biosynthesis 27.2 44 0.0015 25.2 3.0 28 7-41 12-40 (155)
205 3m5v_A DHDPS, dihydrodipicolin 27.2 2.6E+02 0.0091 23.0 14.0 37 24-60 88-125 (301)
206 2ph5_A Homospermidine synthase 27.1 28 0.00097 31.4 2.2 23 25-47 93-115 (480)
207 3no5_A Uncharacterized protein 27.1 1.7E+02 0.0059 24.1 6.9 58 5-74 105-164 (275)
208 1bwv_A Rubisco, protein (ribul 27.0 2E+02 0.0068 26.0 7.7 106 23-131 189-306 (493)
209 2keb_A DNA polymerase subunit 26.9 73 0.0025 22.1 3.7 26 166-191 45-70 (101)
210 3my9_A Muconate cycloisomerase 26.7 1.9E+02 0.0066 24.7 7.5 73 61-133 231-305 (377)
211 3p3b_A Mandelate racemase/muco 26.7 1.7E+02 0.0058 25.2 7.2 67 61-127 240-311 (392)
212 1wuf_A Hypothetical protein LI 26.6 1.7E+02 0.0058 25.2 7.2 73 61-133 241-315 (393)
213 2dqw_A Dihydropteroate synthas 26.2 2.8E+02 0.0097 23.0 11.0 99 24-129 50-154 (294)
214 3iv8_A N-acetylglucosamine-6-p 26.2 3.1E+02 0.011 23.6 9.0 97 24-126 76-193 (381)
215 2glo_A Brinker CG9653-PA; prot 25.5 77 0.0026 19.0 3.5 20 171-191 28-47 (59)
216 2qdd_A Mandelate racemase/muco 25.3 97 0.0033 26.6 5.3 73 61-133 226-300 (378)
217 1n7k_A Deoxyribose-phosphate a 24.9 2.7E+02 0.0091 22.3 8.8 27 24-50 146-172 (234)
218 1tv8_A MOAA, molybdenum cofact 24.8 3E+02 0.01 22.8 9.6 102 23-131 50-169 (340)
219 3b0z_B Flagellar biosynthetic 30.7 15 0.00053 26.2 0.0 27 111-137 30-56 (114)
220 1tzz_A Hypothetical protein L1 24.8 3.3E+02 0.011 23.3 9.2 67 61-127 250-325 (392)
221 1v5x_A PRA isomerase, phosphor 24.7 97 0.0033 24.3 4.7 32 71-102 51-83 (203)
222 3t76_A VANU, transcriptional r 24.6 35 0.0012 22.8 1.8 25 169-193 27-51 (88)
223 2vef_A Dihydropteroate synthas 24.6 3.1E+02 0.011 23.0 11.0 100 24-129 31-137 (314)
224 3bzs_A ESCU; auto cleavage pro 24.4 23 0.0008 26.2 0.9 25 111-135 84-108 (137)
225 3rcy_A Mandelate racemase/muco 24.2 3.2E+02 0.011 23.9 8.6 68 61-128 243-312 (433)
226 2jlj_A YSCU, YOP proteins tran 23.6 24 0.00082 26.4 0.9 25 111-135 83-107 (144)
227 2gou_A Oxidoreductase, FMN-bin 23.5 2.1E+02 0.007 24.5 7.0 73 24-100 248-321 (365)
228 3t6c_A RSPA, putative MAND fam 23.5 3.7E+02 0.013 23.5 8.9 69 61-129 280-350 (440)
229 2zc8_A N-acylamino acid racema 23.4 2.7E+02 0.0092 23.5 7.8 72 61-132 221-294 (369)
230 1wue_A Mandelate racemase/muco 23.2 1.8E+02 0.0062 24.9 6.7 73 61-133 241-315 (386)
231 2qul_A D-tagatose 3-epimerase; 23.1 2.4E+02 0.0082 22.3 7.2 46 84-129 20-68 (290)
232 3cny_A Inositol catabolism pro 23.0 2.5E+02 0.0086 22.4 7.3 41 7-47 11-52 (301)
233 2r1j_L Repressor protein C2; p 22.9 33 0.0011 20.7 1.4 26 169-194 8-33 (68)
234 3dxi_A Putative aldolase; TIM 22.9 3.2E+02 0.011 22.9 8.0 104 23-127 21-133 (320)
235 4e2i_2 DNA polymerase alpha su 22.8 88 0.003 20.6 3.4 26 166-191 22-47 (78)
236 3hou_D DNA-directed RNA polyme 22.4 93 0.0032 24.8 4.0 61 165-235 157-217 (221)
237 2gpe_A Bifunctional protein PU 22.3 97 0.0033 18.0 3.4 22 166-187 13-34 (52)
238 3nvt_A 3-deoxy-D-arabino-heptu 22.2 3.8E+02 0.013 23.2 10.1 97 24-130 154-258 (385)
239 3mcm_A 2-amino-4-hydroxy-6-hyd 22.0 4.2E+02 0.014 23.5 11.1 101 23-128 209-322 (442)
240 3vni_A Xylose isomerase domain 22.0 1.4E+02 0.0048 24.0 5.5 47 83-129 19-69 (294)
241 4e4u_A Mandalate racemase/muco 22.0 3.9E+02 0.013 23.1 10.5 68 61-128 241-310 (412)
242 3s5s_A Mandelate racemase/muco 21.9 1E+02 0.0035 26.7 4.7 72 61-133 230-303 (389)
243 3tc3_A UV damage endonuclease; 21.8 3E+02 0.01 23.1 7.4 80 111-215 63-142 (310)
244 1z41_A YQJM, probable NADH-dep 21.7 1.9E+02 0.0065 24.3 6.4 76 24-100 227-306 (338)
245 3nav_A Tryptophan synthase alp 21.7 3.3E+02 0.011 22.2 8.3 99 24-125 32-154 (271)
246 3gr7_A NADPH dehydrogenase; fl 21.5 2.9E+02 0.0099 23.3 7.5 82 24-107 227-314 (340)
247 3qhx_A Cystathionine gamma-syn 21.4 2.8E+02 0.0097 23.4 7.6 55 81-135 139-195 (392)
248 2lr8_A CAsp8-associated protei 26.8 20 0.00068 23.1 0.0 27 105-131 17-43 (70)
249 1y7y_A C.AHDI; helix-turn-heli 21.2 75 0.0026 19.4 2.9 30 165-194 12-41 (74)
250 2yci_X 5-methyltetrahydrofolat 20.8 2.1E+02 0.007 23.5 6.2 57 25-82 146-210 (271)
251 3eeg_A 2-isopropylmalate synth 20.8 3.5E+02 0.012 22.6 7.8 98 23-126 25-140 (325)
252 3ks6_A Glycerophosphoryl diest 20.6 1.4E+02 0.0047 23.9 5.0 19 111-129 194-212 (250)
253 3qq6_A HTH-type transcriptiona 20.3 40 0.0014 21.5 1.4 50 169-218 13-65 (78)
254 1mxs_A KDPG aldolase; 2-keto-3 20.3 3.2E+02 0.011 21.5 8.9 86 24-126 36-124 (225)
255 3tqp_A Enolase; energy metabol 20.2 4.4E+02 0.015 23.1 9.9 67 61-127 293-364 (428)
256 3tji_A Mandelate racemase/muco 20.2 2.4E+02 0.0083 24.6 6.9 69 61-129 262-332 (422)
No 1
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=1.3e-56 Score=397.69 Aligned_cols=258 Identities=67% Similarity=1.133 Sum_probs=199.8
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCC-CchhHHHHh--------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ-NANETLLGK-------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~-G~sE~~lG~-------------------- 60 (263)
|++||+||||||++|+.|+...+.+++.++|+.|+++|||+||||+.||. |.||+++|+
T Consensus 10 g~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~i~TK~~~~~ 89 (337)
T 3v0s_A 10 GLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQVGTKFGIHE 89 (337)
T ss_dssp SCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCEEEEEECEEE
T ss_pred CceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceEEEeeecccc
Confidence 78999999999999988886668899999999999999999999999997 699999997
Q ss_pred ------------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC
Q 024724 61 ------------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV 92 (263)
Q Consensus 61 ------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~ 92 (263)
|++|++|+++||||+||||||+.++++++++.
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~ 169 (337)
T 3v0s_A 90 IGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAV 169 (337)
T ss_dssp EETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHH
T ss_pred CCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhcc
Confidence 99999999999999999999999999999999
Q ss_pred CCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHH
Q 024724 93 HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIE 172 (263)
Q Consensus 93 ~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (263)
.+++++|++||++++..+.+++++|+++||++++|+||++|+|+++.....++.++.+...|.|..+..+.....++.+.
T Consensus 170 ~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 249 (337)
T 3v0s_A 170 HPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIE 249 (337)
T ss_dssp SCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHHHHHHC-------------------------CHHHH
T ss_pred CCceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCCCCCCCCCCCcchhhcccccchhhhhhHHHHHHHHH
Confidence 99999999999999987789999999999999999999999999874344566667777777777777778888889999
Q ss_pred HHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccCCCCCcccccccccc
Q 024724 173 NLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVAGDRDPEGFDKASWT 252 (263)
Q Consensus 173 ~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 252 (263)
+||+++|+|++|+||+|+++++.+++||+|+++++||++|+++++++||++++++|+++.+..++.|.+|+.......|.
T Consensus 250 ~ia~~~g~t~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~~g~~~~~~~~~~~~~ 329 (337)
T 3v0s_A 250 ALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVXLTKEDLKEISDAVPLDEVAGESIHEVIAVTNWK 329 (337)
T ss_dssp HHHHHTTSCHHHHHHHHHHTTCTTBCCCCCCSCHHHHHHHHHGGGCCCCHHHHHHHHHTCC-----------------CT
T ss_pred HHHHHhCCCHHHHHHHHHHhCCCCeEEEcCCCCHHHHHHHHHHhccCCCHHHHHHHHHhhcccCCCCCCchHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999854467888
Q ss_pred cccCCCC
Q 024724 253 FANTPPK 259 (263)
Q Consensus 253 ~~~~~~~ 259 (263)
+.++|+.
T Consensus 330 ~~~~~~~ 336 (337)
T 3v0s_A 330 FANTPPL 336 (337)
T ss_dssp TCCCCCC
T ss_pred cCCCCCC
Confidence 8888875
No 2
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=4.6e-53 Score=376.32 Aligned_cols=242 Identities=26% Similarity=0.462 Sum_probs=222.3
Q ss_pred CcccccceeccccCCCC-CCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--------------------
Q 024724 2 VLQVSKLGLGCMNLSSG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~-~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-------------------- 60 (263)
|++||+||||||++|+. |+.. +++++.++|+.|+++|||+||||+.||.|.||+++|+
T Consensus 28 g~~vs~lglGt~~~g~~~~g~~-~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~g~~~~ 106 (348)
T 3n2t_A 28 DTPLSRVALGTWAIGGWMWGGP-DDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAEKPNKAHVATKLGLHWV 106 (348)
T ss_dssp SSCEESEEEECTTSSCSSSCST-THHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHSCCCCEEEEEECEEEE
T ss_pred CCccCCEeEeCccccCCCCCCC-CHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhhCCCeEEEEEeecCCCc
Confidence 78999999999999864 6654 8899999999999999999999999999999999885
Q ss_pred ---------------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHH
Q 024724 61 ---------------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRA 89 (263)
Q Consensus 61 ---------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~ 89 (263)
|++|++|+++||||+||||||+.++++++
T Consensus 107 ~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 186 (348)
T 3n2t_A 107 GEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIF 186 (348)
T ss_dssp SSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHH
T ss_pred CCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceEEecCCCCHHHHHHH
Confidence 99999999999999999999999999999
Q ss_pred hcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCC-CcCCCCCCCcccccCCCCCCcchhhhHHHH
Q 024724 90 HGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK-AVVESVPADSILHFFPRYKGENLDRNKNIY 168 (263)
Q Consensus 90 ~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
++..+++++|++||++++..+.+++++|+++||++++|+||++|+|+++ .....++.++.|...+.|.....+..++.+
T Consensus 187 ~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 266 (348)
T 3n2t_A 187 REVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAM 266 (348)
T ss_dssp HHHSCCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCCTTCCCCTTSGGGGCGGGSTTHHHHHHHHH
T ss_pred HHhCCccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCCccCCCCCCCcchhhcccccchhhHHHHHHHH
Confidence 9999999999999999998888999999999999999999999999998 444456677777777778887788888999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCC--ccCCCCCccc
Q 024724 169 FRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIE--EVAGDRDPEG 245 (263)
Q Consensus 169 ~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~--~~~~~~~~~~ 245 (263)
+.+.+||+++|+|++|+||+|++++ ++++||+|+++++||++|+++++++||++++++|+++.+.. ...|++|..+
T Consensus 267 ~~l~~iA~~~g~t~aqvaL~w~l~~-~v~~~I~g~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~~~~~~~~g~~~~~~ 344 (348)
T 3n2t_A 267 DEFEKLAEKRGKSVMAFAVRWVLDQ-GPVIALWGARKPGQVSGVKDVFGWSLTDEEKKAVDDILARHVPNPIDPTFMAP 344 (348)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHTT-TTEEEEEECSSGGGGTTHHHHSSCCCCHHHHHHHHHHHHHHSCCCCCSSCCC-
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHC-CCcEEEeCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCCccccCC
Confidence 9999999999999999999999999 88999999999999999999999999999999999998766 6678888765
No 3
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=2e-52 Score=367.28 Aligned_cols=231 Identities=29% Similarity=0.523 Sum_probs=212.1
Q ss_pred CcccccceeccccCCCC--CCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh-------------------
Q 024724 2 VLQVSKLGLGCMNLSSG--YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~--~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~------------------- 60 (263)
|++||+||||||++|+. |+. .+++++.++|+.|+++|||+||||+.||.|.||+++|+
T Consensus 10 g~~vs~lglGt~~~g~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~~i~TK~g~~ 88 (312)
T 1pyf_A 10 DLQVFPIGLGTNAVGGHNLYPN-LNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHR 88 (312)
T ss_dssp CCEECSBCEECTTSSCTTTCSS-CCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGCEEEEEECEE
T ss_pred CCcccCEeEeccccCCCCCCCC-CCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeEEEEEEeCCC
Confidence 78999999999999865 543 37899999999999999999999999999999999998
Q ss_pred ------------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC
Q 024724 61 ------------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV 92 (263)
Q Consensus 61 ------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~ 92 (263)
|++|++|+++||||+||||||+.++++++++.
T Consensus 89 ~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~ 168 (312)
T 1pyf_A 89 KQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKD 168 (312)
T ss_dssp EETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhh
Confidence 99999999999999999999999999999999
Q ss_pred CCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCC-CcCCCCCCCcccccCCCCCCcchhhhHHHHHHH
Q 024724 93 HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK-AVVESVPADSILHFFPRYKGENLDRNKNIYFRI 171 (263)
Q Consensus 93 ~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (263)
.+++++|++||++++..+.+++++|+++||++++|+||++|+|+++ .....+++++.|...+.|..+..+......+.+
T Consensus 169 ~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l 248 (312)
T 1pyf_A 169 GLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKL 248 (312)
T ss_dssp SCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTTCGGGGSGGGSHHHHHHHHHHHHTT
T ss_pred CCceEEeccCCccccchHHHHHHHHHHcCCeEEEecccccccccCCCCCCCCCCCcccccccccccchhHHHHHHHHHHH
Confidence 9999999999999998777899999999999999999999999998 334456667777766777665566777888999
Q ss_pred HHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCC
Q 024724 172 ENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVP 233 (263)
Q Consensus 172 ~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~ 233 (263)
.++|+++|+|++|+||+|++++|.|++||+|+++++||++|+++++++||++++++|+++.+
T Consensus 249 ~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a~~~~L~~~~~~~l~~~~~ 310 (312)
T 1pyf_A 249 APIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKLFA 310 (312)
T ss_dssp HHHHHHTTSCHHHHHHHHHHHSTTCCCBCCCCSSHHHHHHHHGGGGCCCCHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHhhccCCCCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999875
No 4
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=3.3e-52 Score=368.79 Aligned_cols=240 Identities=26% Similarity=0.452 Sum_probs=217.7
Q ss_pred CcccccceeccccCCCC-CCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--------------------
Q 024724 2 VLQVSKLGLGCMNLSSG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~-~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-------------------- 60 (263)
|++||+||||||++|+. |+. .+++++.++|+.|+++|||+||||+.||.|.||+++|+
T Consensus 10 g~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~~i~TK~~~~ 88 (333)
T 1pz1_A 10 GIEASRIGLGTWAIGGTMWGG-TDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVILATKTALD 88 (333)
T ss_dssp SCEEESEEEECTGGGCTTTTC-CCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGCEEEEEECEE
T ss_pred CCcccCEeEechhhcCCcCCC-CCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeEEEEEeeCcc
Confidence 78999999999999865 664 38899999999999999999999999999999999987
Q ss_pred ------------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC
Q 024724 61 ------------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV 92 (263)
Q Consensus 61 ------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~ 92 (263)
|++|++|+++||||+||||||+.++++++++.
T Consensus 89 ~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~ 168 (333)
T 1pz1_A 89 WKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAV 168 (333)
T ss_dssp ESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhc
Confidence 99999999999999999999999999999999
Q ss_pred CCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCC-cCCCCCCCcccccCCCCCCcchhhhHHHHHHH
Q 024724 93 HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA-VVESVPADSILHFFPRYKGENLDRNKNIYFRI 171 (263)
Q Consensus 93 ~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (263)
.+++++|++||++++..+.+++++|+++||++++|+||++|+|+++. ....+++++.|...|.|....+....+.++.+
T Consensus 169 ~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l 248 (333)
T 1pz1_A 169 APLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQL 248 (333)
T ss_dssp SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCCTTCCCCTTCGGGSCGGGSTTTHHHHHHHHHHH
T ss_pred CCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccCCccCCCccccccCCCccccccccccchhhHHHHHHHHHHH
Confidence 99999999999999987789999999999999999999999999983 33344555666555566666667888899999
Q ss_pred HHHHHHcCC-CHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCC--ccCCCCC
Q 024724 172 ENLAKKYKC-TSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIE--EVAGDRD 242 (263)
Q Consensus 172 ~~ia~~~g~-s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~--~~~~~~~ 242 (263)
.++|+++|+ |++|+||+|+++++.|++||+|+++++||++|+++++++||++++++|+++.+.. ++.|.+|
T Consensus 249 ~~ia~~~g~~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~~~~g~~~ 322 (333)
T 1pz1_A 249 DKLAKTRYGKSVIHLAVRWILDQPGADIALWGARKPGQLEALSEITGWTLNSEDQKDINTILENTISDPVGPEF 322 (333)
T ss_dssp HHHHHHHHSCCHHHHHHHHHHTSTTCCEEEEECCSGGGGTTCTTSSSCCCCHHHHHHHHHHHHHHCSSCCCSGG
T ss_pred HHHHHHhCCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHhhcccCCccccc
Confidence 999999999 9999999999999999999999999999999999999999999999999998766 6777776
No 5
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=2.5e-49 Score=349.63 Aligned_cols=231 Identities=28% Similarity=0.467 Sum_probs=197.7
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||.. ||...+.+++.++|+.|+++|||+||||+.||.|.||+++|+
T Consensus 12 g~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~ 88 (327)
T 3eau_A 12 GLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWG 88 (327)
T ss_dssp SCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEEESBC
T ss_pred CCcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCeEEEEEeecCC
Confidence 78999999999843 344558899999999999999999999999999999999998
Q ss_pred -----------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC-
Q 024724 61 -----------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV- 92 (263)
Q Consensus 61 -----------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~- 92 (263)
|++|++|+++||||+||||||+.+++.++...
T Consensus 89 ~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 168 (327)
T 3eau_A 89 GKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVA 168 (327)
T ss_dssp CSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHHHHHH
Confidence 99999999999999999999999999887653
Q ss_pred -----CCceEEeccCCCcccc-hhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCC-------CCc
Q 024724 93 -----HPITAVQMEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRY-------KGE 159 (263)
Q Consensus 93 -----~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~-------~~~ 159 (263)
.+++++|++||++++. .+.+++++|+++||++++|+||++|+|++++... .+.+ .+...+.+ ..+
T Consensus 169 ~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 246 (327)
T 3eau_A 169 RQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPY-SRASLKGYQWLKDKILSE 246 (327)
T ss_dssp HHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTS-CCTT-SGGGSTTCHHHHHHHHSH
T ss_pred HHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccCC-CCCC-cccccccccccccccccc
Confidence 5789999999999986 3467999999999999999999999999984432 2222 22221111 112
Q ss_pred chhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCC--CCCHHHHHHHHHhCCCCcc
Q 024724 160 NLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRI--KLTKEDLKEISDAVPIEEV 237 (263)
Q Consensus 160 ~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~--~Lt~e~~~~i~~~~~~~~~ 237 (263)
.........+.+.++|+++|+|++|+||+|++++|.|++||+|+++++||++|++++++ +||++++++|+++.++.|+
T Consensus 247 ~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~~~L~~e~~~~i~~~~~~~p~ 326 (327)
T 3eau_A 247 EGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPY 326 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHSSTTCCEEEECCSSHHHHHHHHGGGGGGGGCCHHHHHHHHHHHCCCCC
T ss_pred hhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCceEEeCCCCHHHHHHHHHHhccCCCCCHHHHHHHHHHhhccCC
Confidence 22345667899999999999999999999999999999999999999999999999998 9999999999999987553
No 6
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-49 Score=355.62 Aligned_cols=237 Identities=27% Similarity=0.444 Sum_probs=199.3
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||.. ||...+.+++.++|+.|+++|||+||||+.||.|.||++||+
T Consensus 46 g~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~ 122 (367)
T 3lut_A 46 GLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWG 122 (367)
T ss_dssp SCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEEESBC
T ss_pred CCcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCceEEEEeccccC
Confidence 78999999999843 344558899999999999999999999999999999999998
Q ss_pred -----------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC-
Q 024724 61 -----------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV- 92 (263)
Q Consensus 61 -----------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~- 92 (263)
|++|++|+++||||+||||||+..++.+++..
T Consensus 123 ~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 202 (367)
T 3lut_A 123 GKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVA 202 (367)
T ss_dssp CSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHHH
Confidence 89999999999999999999999999887653
Q ss_pred -----CCceEEeccCCCcccch-hhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCC-------CCc
Q 024724 93 -----HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRY-------KGE 159 (263)
Q Consensus 93 -----~~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~-------~~~ 159 (263)
.+++++|++||++++.. +.+++++|+++||++++|+||++|+|+++.... .+. +.|...+.+ ..+
T Consensus 203 ~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~~-~~~-~~r~~~~~~~~~~~~~~~~ 280 (367)
T 3lut_A 203 RQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPP-YSRASLKGYQWLKDKILSE 280 (367)
T ss_dssp HHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTTS-CCT-TSGGGSTTCHHHHHHHTSH
T ss_pred HHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCCC-CCC-cccccccccccccccccch
Confidence 57899999999999975 558999999999999999999999999984332 222 222211111 111
Q ss_pred chhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCC--CCCHHHHHHHHHhCCCCcc
Q 024724 160 NLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRI--KLTKEDLKEISDAVPIEEV 237 (263)
Q Consensus 160 ~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~--~Lt~e~~~~i~~~~~~~~~ 237 (263)
.........+.+.++|+++|+|++|+||+|+++++.|++||+|+++++||++|++++++ +||++++++|+++.++.++
T Consensus 281 ~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~~~Ls~e~~~~i~~~~~~~~~ 360 (367)
T 3lut_A 281 EGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPY 360 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTSTTEEEEEECCSSHHHHHHHHTHHHHGGGCCHHHHHHHHHHHCCCCC
T ss_pred hhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEecCCCCHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCC
Confidence 12234567789999999999999999999999999999999999999999999999986 8999999999999999998
Q ss_pred CCCCCc
Q 024724 238 AGDRDP 243 (263)
Q Consensus 238 ~~~~~~ 243 (263)
.+.+|.
T Consensus 361 ~~~~~~ 366 (367)
T 3lut_A 361 SKKDYR 366 (367)
T ss_dssp C-----
T ss_pred cccccC
Confidence 888774
No 7
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=1.1e-48 Score=348.73 Aligned_cols=227 Identities=26% Similarity=0.436 Sum_probs=192.9
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCC--CchhHHHHh-------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANETLLGK------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~--G~sE~~lG~------------------- 60 (263)
|++||+||||||.. ||...+.+++.++|+.|+++|||+||||+.||. |.||+++|+
T Consensus 43 g~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~ 119 (353)
T 3erp_A 43 GVKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKA 119 (353)
T ss_dssp SCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CCccCCeeecChhh---cCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeee
Confidence 78999999999942 333458899999999999999999999999998 999999986
Q ss_pred ---------------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHH
Q 024724 61 ---------------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRA 89 (263)
Q Consensus 61 ---------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~ 89 (263)
|++|++|+++||||+||||||++++++++
T Consensus 120 g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~ 199 (353)
T 3erp_A 120 GYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQA 199 (353)
T ss_dssp SSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHH
T ss_pred ccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecCCCHHHHHHH
Confidence 99999999999999999999999999888
Q ss_pred hcC-----CCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccC-CCCCC-cchh
Q 024724 90 HGV-----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFF-PRYKG-ENLD 162 (263)
Q Consensus 90 ~~~-----~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~-~~~~~-~~~~ 162 (263)
++. .+++++|++||++++..+.+++++|+++||++++|+||++|+|++++... .|.+...... +.|.+ ...+
T Consensus 200 ~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~~-~p~~~r~~~~~~~~~~~~~~~ 278 (353)
T 3erp_A 200 IDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLNG-IPEDSRAASGSRFLKPEQITA 278 (353)
T ss_dssp HHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC--------------------CCH
T ss_pred HHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCCccCC-CCCcccccccccccccccccH
Confidence 764 57899999999999987789999999999999999999999999984333 3332222111 11222 2224
Q ss_pred hhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhcc-CCCCCHHHHHHHHHhC
Q 024724 163 RNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSL-RIKLTKEDLKEISDAV 232 (263)
Q Consensus 163 ~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~-~~~Lt~e~~~~i~~~~ 232 (263)
..++.++.+.+||+++|+|++|+||+|+++++.|++||+|+++++||++|++++ +++||++++++|+++.
T Consensus 279 ~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~G~~~~~~l~enl~a~~~~~Ls~ee~~~i~~~~ 349 (353)
T 3erp_A 279 DKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSAAECAEIDAIL 349 (353)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTSCCCEEEECCSSHHHHHHHHHGGGGCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEEeCCCCHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 577888999999999999999999999999999999999999999999999999 8899999999999987
No 8
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=1.3e-48 Score=347.63 Aligned_cols=228 Identities=24% Similarity=0.444 Sum_probs=192.9
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCC--CchhHHHHh-------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANETLLGK------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~--G~sE~~lG~------------------- 60 (263)
|++||.||||||.. ||...+.+++.++|+.|+++||||||||+.||. |.||+++|+
T Consensus 22 g~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~~~I~TK~ 98 (346)
T 3n6q_A 22 GLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKA 98 (346)
T ss_dssp SCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHCTTTGGGCEEEEEE
T ss_pred CCeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhhcccccccEEEEEEe
Confidence 78999999999864 444457899999999999999999999999998 999999997
Q ss_pred ---------------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHH
Q 024724 61 ---------------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRA 89 (263)
Q Consensus 61 ---------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~ 89 (263)
|++|++|+++||||+||||||++++++++
T Consensus 99 g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~ 178 (346)
T 3n6q_A 99 GYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKM 178 (346)
T ss_dssp CSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHH
T ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHH
Confidence 99999999999999999999999999886
Q ss_pred hcC-----CCceEEeccCCCcccchhh-hhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCC-----CCC
Q 024724 90 HGV-----HPITAVQMEWSLWTRDIEE-EIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPR-----YKG 158 (263)
Q Consensus 90 ~~~-----~~~~~~q~~~n~~~~~~~~-~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~-----~~~ 158 (263)
++. .+++++|++||++++..+. +++++|+++||++++|+||++|+|++++... .|.+. |...+. +.+
T Consensus 179 ~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~-~~~~~-r~~~~~~~~~~~~~ 256 (346)
T 3n6q_A 179 VELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNG-IPQDS-RMHREGNKVRGLTP 256 (346)
T ss_dssp HHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC-----------------------
T ss_pred HHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCccCC-CCCcc-ccccccccccccch
Confidence 553 5788999999999998766 8999999999999999999999999984332 22222 211111 222
Q ss_pred -cchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhcc-CCCCCHHHHHHHHHhCCC
Q 024724 159 -ENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSL-RIKLTKEDLKEISDAVPI 234 (263)
Q Consensus 159 -~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~-~~~Lt~e~~~~i~~~~~~ 234 (263)
...+..++.++.+.+||+++|+|++|+||+|++++|.|++||+|+++++||++|++++ +++||++++++|+++.+.
T Consensus 257 ~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~a~~~~~Ls~e~~~~i~~~~~~ 334 (346)
T 3n6q_A 257 KMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQHIAD 334 (346)
T ss_dssp --CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSSTTCSEEEECCSSHHHHHHHHGGGGCCCCCHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCcEEEcCCCCHHHHHHHHhhccCCCCCHHHHHHHHHHHhc
Confidence 2224677888999999999999999999999999999999999999999999999998 789999999999999864
No 9
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=1.8e-47 Score=336.39 Aligned_cols=210 Identities=23% Similarity=0.343 Sum_probs=190.9
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
+++||+||||||++|+ |+ .+++++.++|+.|+++|||+||||+.||.|.||+.+|+
T Consensus 32 ~~~vs~lglGt~~~g~-~~--~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~ 108 (319)
T 1ur3_M 32 GPEFSRFVMGYWRLMD-WN--MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIA 108 (319)
T ss_dssp CCEEESSEEECTTTTT-TT--CCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTCEEEEEECEE
T ss_pred CcccccccEeccccCC-CC--CCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeEEEEEeeccC
Confidence 5789999999999986 53 37889999999999999999999999999999999997
Q ss_pred ----------------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHH
Q 024724 61 ----------------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRR 88 (263)
Q Consensus 61 ----------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~ 88 (263)
|++|++|+++||||+||||||+.+++++
T Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~ 188 (319)
T 1ur3_M 109 TTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFAL 188 (319)
T ss_dssp CTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEESCCHHHHHH
T ss_pred CCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecCCCHHHHHH
Confidence 8999999999999999999999999999
Q ss_pred HhcCC--CceEEeccCCCcccch-hhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhH
Q 024724 89 AHGVH--PITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNK 165 (263)
Q Consensus 89 ~~~~~--~~~~~q~~~n~~~~~~-~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
+.+.. +++++|++||++++.. +.+++++|+++||++++|+||++|+|... +...
T Consensus 189 ~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~~-----------------------~~~~ 245 (319)
T 1ur3_M 189 LQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFND-----------------------DYFQ 245 (319)
T ss_dssp HHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSC-----------------------GGGH
T ss_pred HHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccCC-----------------------chhH
Confidence 88864 7899999999999975 46799999999999999999999987431 1234
Q ss_pred HHHHHHHHHHHHcCCCH-HHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCcc
Q 024724 166 NIYFRIENLAKKYKCTS-AQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEV 237 (263)
Q Consensus 166 ~~~~~l~~ia~~~g~s~-~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~ 237 (263)
...+.+.++|+++|+|+ +|+||+|++++|.+++||+|+++++||++|+++++++||++++++|+++.++.++
T Consensus 246 ~~~~~l~~ia~~~g~t~~aqvaL~w~l~~~~~~~~I~G~~~~~~l~en~~a~~~~Ls~ee~~~l~~~~~~~~~ 318 (319)
T 1ur3_M 246 PLRDELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYDV 318 (319)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHTSTTCCEEEECCSCHHHHHHHHGGGGCCCCHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHhcCCCC
Confidence 56789999999999999 9999999999999999999999999999999999999999999999999876544
No 10
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=2.5e-47 Score=339.24 Aligned_cols=229 Identities=29% Similarity=0.435 Sum_probs=197.9
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcC-------CCchhHHHHh--------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG-------QNANETLLGK-------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-------~G~sE~~lG~-------------- 60 (263)
|++||+||||||+||. ..+.+++.++|+.|+++|||+||||+.|| .|.||+++|+
T Consensus 10 g~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~~~R~~~~i~ 85 (346)
T 1lqa_A 10 SLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIA 85 (346)
T ss_dssp SCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHHCCGGGCEEE
T ss_pred CCeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhcCCCceEEEE
Confidence 7899999999998763 23788999999999999999999999996 6789988875
Q ss_pred ------------------------------------------------H---------------------------HHHH
Q 024724 61 ------------------------------------------------I---------------------------GEMK 65 (263)
Q Consensus 61 ------------------------------------------------~---------------------------~~l~ 65 (263)
. ++|+
T Consensus 86 TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~~~e~~~al~ 165 (346)
T 1lqa_A 86 SKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALA 165 (346)
T ss_dssp EEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSCHHHHHHHHH
T ss_pred EeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCCHHHHHHHHH
Confidence 2 4799
Q ss_pred HHHHcCCcCEEEcCCCCHHHHHHHhc------CCCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCC
Q 024724 66 KLVEEGKIKYIGLSEASPDTIRRAHG------VHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKA 139 (263)
Q Consensus 66 ~l~~~Gkir~iGvs~~~~~~l~~~~~------~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~ 139 (263)
+|+++||||+||||||+..++.++++ ..+++++|++||++++..+.+++++|+++||++++|+||++|+|++++
T Consensus 166 ~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~ 245 (346)
T 1lqa_A 166 EYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKY 245 (346)
T ss_dssp HHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTTGGGGGGTTT
T ss_pred HHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecchhhhhhcCcc
Confidence 99999999999999999988776543 256899999999999987789999999999999999999999999984
Q ss_pred cCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCC
Q 024724 140 VVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIK 219 (263)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~ 219 (263)
.....|.++.+...+.|.....+...+.++.+.++|+++|+|++|+||+|++++|.|++||+|+++++||++|+++++++
T Consensus 246 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~~~~~l~enl~a~~~~ 325 (346)
T 1lqa_A 246 LNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLE 325 (346)
T ss_dssp GGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEECCSSHHHHHHHHGGGGCC
T ss_pred ccccCCCcchhhcchhhcccccHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCC
Confidence 33334444433333445444556778889999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhCCC
Q 024724 220 LTKEDLKEISDAVPI 234 (263)
Q Consensus 220 Lt~e~~~~i~~~~~~ 234 (263)
||++++++|+++.+.
T Consensus 326 L~~e~~~~l~~~~~~ 340 (346)
T 1lqa_A 326 LSEDVLAEIEAVHQV 340 (346)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhh
Confidence 999999999998653
No 11
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=1.5e-47 Score=338.32 Aligned_cols=234 Identities=21% Similarity=0.260 Sum_probs=195.9
Q ss_pred CCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--------------------
Q 024724 1 MVLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-------------------- 60 (263)
Q Consensus 1 ~~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-------------------- 60 (263)
|.-.+|+||||||+||.. .+.+++.++|+.|+++|||+||||+.||.|.||+++|+
T Consensus 1 ~~~~~~~lglGt~~~g~~----~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~ 76 (327)
T 1gve_A 1 MSQARPATVLGAMEMGRR----MDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAP 76 (327)
T ss_dssp ---CCCEEEEECTTBTTT----BCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECS
T ss_pred CCCCCCCeEEcccccCCC----CCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECC
Confidence 445689999999999742 47899999999999999999999999999999999997
Q ss_pred --------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC----
Q 024724 61 --------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV---- 92 (263)
Q Consensus 61 --------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~---- 92 (263)
|++|++|+++||||+||||||+.+++.++++.
T Consensus 77 ~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~ 156 (327)
T 1gve_A 77 MFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKN 156 (327)
T ss_dssp CTTCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999887654
Q ss_pred --CCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcC-CCCCCCcccccCCCCCC----------c
Q 024724 93 --HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV-ESVPADSILHFFPRYKG----------E 159 (263)
Q Consensus 93 --~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~-~~~~~~~~~~~~~~~~~----------~ 159 (263)
.+++++|++||++++..+.+++++|+++||++++|+||++|+|+++... ..++ +...+.+.. +
T Consensus 157 g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 232 (327)
T 1gve_A 157 GWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDG----KNPESRFFGNPFSQLYMDRY 232 (327)
T ss_dssp TCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCGGGGGS----CCCSSSSSSCTTHHHHHHHH
T ss_pred CCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCcccCCCccc----cCCCccccccccchhhhhcc
Confidence 5689999999999998778999999999999999999999999987321 1110 000011111 1
Q ss_pred chhhhHHHHHHHHHHHHH----cCCCHHHHHHHHhhcCCCc-----eeeccCCCcHHHHHHhhhccCC-CCCHHHHHHHH
Q 024724 160 NLDRNKNIYFRIENLAKK----YKCTSAQLALAWVLGQGDD-----VVPIPGTTKIKNLDDNIDSLRI-KLTKEDLKEIS 229 (263)
Q Consensus 160 ~~~~~~~~~~~l~~ia~~----~g~s~~q~al~w~l~~~~v-----~~vi~g~~~~~~l~enl~a~~~-~Lt~e~~~~i~ 229 (263)
..+..++..+.+.++|++ +|+|++|+||+|++++|.| ++||+|+++++||++|++++++ +||++++++|+
T Consensus 233 ~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~~I~g~~~~~~l~en~~a~~~~~L~~e~~~~l~ 312 (327)
T 1gve_A 233 WKEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQNLALVEEGPLEPAVVDAFD 312 (327)
T ss_dssp CSHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTSSCCGGGTCEEEECCSSHHHHHHHHHHTTCCCCCHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHhCCCccccCCCeEEECCCCHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 114456778999999999 9999999999999999998 8999999999999999999987 89999999999
Q ss_pred HhCCCCccCCCCC
Q 024724 230 DAVPIEEVAGDRD 242 (263)
Q Consensus 230 ~~~~~~~~~~~~~ 242 (263)
++.+..+...+.|
T Consensus 313 ~~~~~~~~~~~~~ 325 (327)
T 1gve_A 313 QAWNLVAHECPNY 325 (327)
T ss_dssp HHHHHHGGGCCCS
T ss_pred HHHHhccCCCccc
Confidence 9987654444433
No 12
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-47 Score=336.17 Aligned_cols=195 Identities=26% Similarity=0.450 Sum_probs=175.5
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||.||||||+++ +.+++.++|+.|+++||||||||+.|| +|+.+|+
T Consensus 48 G~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r~~~~i~~k 117 (314)
T 3b3d_A 48 GVEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISREDLFITSK 117 (314)
T ss_dssp SCEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCGGGCEEEEE
T ss_pred cCcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCccccccccc
Confidence 789999999999874 457899999999999999999999999 8999987
Q ss_pred -------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceE
Q 024724 61 -------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITA 97 (263)
Q Consensus 61 -------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~ 97 (263)
|++|++|+++||||+||||||+.+++.++++...+..
T Consensus 118 ~~~~~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~i~~ 197 (314)
T 3b3d_A 118 VWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEGKYKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKP 197 (314)
T ss_dssp ECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTTHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCSSCC
T ss_pred CcCCCCCHHHHHHHHHHHHHHhCCCcccccccccccccchhHHHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcCCCe
Confidence 9999999999999999999999999999998876654
Q ss_pred EeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHH
Q 024724 98 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKK 177 (263)
Q Consensus 98 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 177 (263)
+|.+||+..+..+.+++++|+++||++++|+||++|.|+++ ..+.++|++
T Consensus 198 ~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~------------------------------~~~~~ia~~ 247 (314)
T 3b3d_A 198 MINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDH------------------------------PVLADIAQT 247 (314)
T ss_dssp SEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTC------------------------------HHHHHHHHH
T ss_pred EEEEeccccccchHHHHHHHHHcCCEEEEeccccCCcccCc------------------------------hhhHHHHHH
Confidence 45555555555578999999999999999999999998765 367889999
Q ss_pred cCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccC
Q 024724 178 YKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVA 238 (263)
Q Consensus 178 ~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~ 238 (263)
+|+|++|+||+|++++| .+||+|+++++||+||+++++++||++|+++|+++.++.++.
T Consensus 248 ~g~t~aqvaL~w~l~~~--~v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~~ 306 (314)
T 3b3d_A 248 YNKSVAQIILRWDLQHG--IITIPKSTKEHRIKENASVFDFELTQDDMNRIDALNENLRVG 306 (314)
T ss_dssp TTCCHHHHHHHHHHHTT--CEECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCCS
T ss_pred cCCCHHHHHHHHHHhCC--CEEEECCCCHHHHHHHHHhcCCCCCHHHHHHHhccCCCCCCC
Confidence 99999999999999999 568999999999999999999999999999999998876654
No 13
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=4.7e-47 Score=333.51 Aligned_cols=214 Identities=29% Similarity=0.494 Sum_probs=189.5
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||++|. +.+++.++|+.|+++|||+||||+.||.|.||+.+|+
T Consensus 30 g~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~~~~~~~ 103 (317)
T 1ynp_A 30 DLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGRRQDIILATKVGNRFEQ 103 (317)
T ss_dssp SCEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTTCGGGCEEEEEC------
T ss_pred CCcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCeEEEEeeeCCCcCC
Confidence 7899999999999864 5688999999999999999999999999999999998
Q ss_pred -----------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC
Q 024724 61 -----------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH 93 (263)
Q Consensus 61 -----------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~ 93 (263)
|++|++|+++||||+||||||+.++++++++..
T Consensus 104 ~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 183 (317)
T 1ynp_A 104 GKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRS 183 (317)
T ss_dssp ---------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHHS
T ss_pred CCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHhcC
Confidence 899999999999999999999999999999988
Q ss_pred CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHH
Q 024724 94 PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIEN 173 (263)
Q Consensus 94 ~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (263)
+++++|++||++++..+. ++++|+++||++++|+||++|+|+++ .+. . + +.|... ......+.+.+
T Consensus 184 ~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~-~~~--~----~---~~~~~~---~~~~~~~~l~~ 249 (317)
T 1ynp_A 184 NIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR-PLP--E----G---EGYLNY---RYDELKLLRES 249 (317)
T ss_dssp CCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS-CCC--T----T---CCBTTB---CHHHHHHHHHH
T ss_pred CCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC-CCc--c----c---cccccc---cHHHHHHHHHH
Confidence 899999999999997655 99999999999999999999999876 211 0 0 111111 22344578888
Q ss_pred HHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccC-CCCCHHHHHHHHHhCCCCcc
Q 024724 174 LAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLR-IKLTKEDLKEISDAVPIEEV 237 (263)
Q Consensus 174 ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~-~~Lt~e~~~~i~~~~~~~~~ 237 (263)
||+ |+|++|+||+|++++|.|++||+|+++++||++|+++++ ++||++++++|+++.++.+.
T Consensus 250 ia~--g~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~~Ls~ee~~~l~~~~~~~~~ 312 (317)
T 1ynp_A 250 LPT--DRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKLAKAAVY 312 (317)
T ss_dssp SCS--SSCHHHHHHHHHHTSTTEEEEECCCSSHHHHHHHHHHHTSCCCCHHHHHHHHHHSCCCCC
T ss_pred HHc--CCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCCHHHHHHHHHHHhhhcc
Confidence 888 999999999999999999999999999999999999998 89999999999999876543
No 14
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=4.2e-47 Score=329.90 Aligned_cols=197 Identities=25% Similarity=0.441 Sum_probs=177.1
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||.||||||+++ +.+++.++|+.|+++||||||||+.|| ||+.+|+
T Consensus 21 G~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~r~~~~i~tk~~~~ 90 (290)
T 4gie_A 21 SVRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVPREEVWVTTKVWNS 90 (290)
T ss_dssp SCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCCGGGSEEEEEECGG
T ss_pred CCCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCcchhcccccccccc
Confidence 899999999999863 567899999999999999999999999 8999998
Q ss_pred ---------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCC--ceEEe
Q 024724 61 ---------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHP--ITAVQ 99 (263)
Q Consensus 61 ---------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~--~~~~q 99 (263)
|++|++|+++||||+||+|||+++++.++.+... +.++|
T Consensus 91 ~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q 170 (290)
T 4gie_A 91 DQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKKKFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQ 170 (290)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSSSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCSEEE
T ss_pred CCChHHHHHHHHHHHHHhCCCceeeEEecCCCCCcchHHHHHHHHHHHCCCcceeeecCCCHHHHHHHHHhccCCCceee
Confidence 9999999999999999999999999999988754 45677
Q ss_pred ccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHcC
Q 024724 100 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKYK 179 (263)
Q Consensus 100 ~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g 179 (263)
+++++..+ +.+++++|+++||++++|+||++|.+++.... +.+.++|+++|
T Consensus 171 ~~~~~~~~--~~~l~~~~~~~gi~~~a~spl~~G~l~~~~~~---------------------------~~l~~iA~~~g 221 (290)
T 4gie_A 171 VELHPLFQ--QRTLREFCKQHNIAITAWSPLGSGEEAGILKN---------------------------HVLGEIAKKHN 221 (290)
T ss_dssp EECBTTBC--CHHHHHHHHHTTCEEEEESTTCSSGGGCGGGC---------------------------HHHHHHHHHHT
T ss_pred Eeccccch--hHHHHHHHHHcCceEeeecccccccccccchh---------------------------HHHHHHHHHhC
Confidence 77776655 67899999999999999999999988765211 47999999999
Q ss_pred CCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccCC
Q 024724 180 CTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVAG 239 (263)
Q Consensus 180 ~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~~ 239 (263)
+|++|+||+|++++| .+||+|+++++||++|+++++++||++|+++|+++.++.++..
T Consensus 222 ~t~aqvaL~w~l~~~--~v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~~~ 279 (290)
T 4gie_A 222 KSPAQVVIRWDIQHG--IVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRIGA 279 (290)
T ss_dssp CCHHHHHHHHHHHTT--CEECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCCSC
T ss_pred CCHHHHHHHHHHhCC--CEEEECCCCHHHHHHHHhhcCCCCCHHHHHHHhccCCCCCcCC
Confidence 999999999999999 5689999999999999999999999999999999988766543
No 15
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=5.4e-47 Score=338.58 Aligned_cols=233 Identities=20% Similarity=0.264 Sum_probs=195.0
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
+..||+||||||+||+ ..+.+++.++|+.|+++||||||||+.||.|.||+++|+
T Consensus 35 ~~~ip~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v~I~TK~~~~ 110 (360)
T 2bp1_A 35 PPPRVASVLGTMEMGR----RMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKANPW 110 (360)
T ss_dssp ---CCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCCEEEEEECCC
T ss_pred CCCCCCEEECchhhCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhccCCCCeEEEEeeecCC
Confidence 3569999999999874 237889999999999999999999999999999999997
Q ss_pred -------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC-----
Q 024724 61 -------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV----- 92 (263)
Q Consensus 61 -------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~----- 92 (263)
|++|++|+++||||+||||||+.++++++++.
T Consensus 111 ~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g 190 (360)
T 2bp1_A 111 DGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNG 190 (360)
T ss_dssp TTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999887654
Q ss_pred -CCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcC-CCCCCCcccccCCCCCC----------cc
Q 024724 93 -HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVV-ESVPADSILHFFPRYKG----------EN 160 (263)
Q Consensus 93 -~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~-~~~~~~~~~~~~~~~~~----------~~ 160 (263)
.+++++|++||++++..+.+++++|+++||++++|+||++|+|++++.. ..++. ...+.+.. +.
T Consensus 191 ~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 266 (360)
T 2bp1_A 191 WILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGK----QPVGRFFGNSWAETYRNRFW 266 (360)
T ss_dssp CCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCGGGGTTT----CCSBTTBSSTTHHHHHHHHC
T ss_pred CCCceEEeeccchhhccchhhHHHHHHHcCCeEEEecccccCcccCCccCcCcccc----cccccccccccchhhhhccc
Confidence 5689999999999998778999999999999999999999999987321 11110 00011111 11
Q ss_pred hhhhHHHHHHHHHHHHH----cCCCHHHHHHHHhhcCCCc-----eeeccCCCcHHHHHHhhhccCC-CCCHHHHHHHHH
Q 024724 161 LDRNKNIYFRIENLAKK----YKCTSAQLALAWVLGQGDD-----VVPIPGTTKIKNLDDNIDSLRI-KLTKEDLKEISD 230 (263)
Q Consensus 161 ~~~~~~~~~~l~~ia~~----~g~s~~q~al~w~l~~~~v-----~~vi~g~~~~~~l~enl~a~~~-~Lt~e~~~~i~~ 230 (263)
.+..++..+.+.++|++ +|+|++|+||+|++++|.| ++||+|+++++||++|++++++ +||++++++|++
T Consensus 267 ~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~vI~G~~~~~~l~enl~a~~~~~L~~e~~~~l~~ 346 (360)
T 2bp1_A 267 KEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAATEEGPLEPAVVDAFNQ 346 (360)
T ss_dssp CHHHHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHSSCCGGGTCEEEECCSSHHHHHHHHHHHTSCCCCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCcccccCCCeEEECCCCHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 23456778899999999 9999999999999999988 7999999999999999999987 899999999999
Q ss_pred hCCCCccCCCCC
Q 024724 231 AVPIEEVAGDRD 242 (263)
Q Consensus 231 ~~~~~~~~~~~~ 242 (263)
+.+..+..-+.|
T Consensus 347 ~~~~~~~~~~~~ 358 (360)
T 2bp1_A 347 AWHLVAHECPNY 358 (360)
T ss_dssp HHHHHGGGCCCS
T ss_pred HHHhccCCcccc
Confidence 976554433333
No 16
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=5.1e-47 Score=334.46 Aligned_cols=203 Identities=27% Similarity=0.362 Sum_probs=180.3
Q ss_pred CCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--------------------
Q 024724 1 MVLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-------------------- 60 (263)
Q Consensus 1 ~~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-------------------- 60 (263)
.|++||.||||||++ +++++.++|+.|+++||||||||+.|| ||+.+|+
T Consensus 9 tG~~vp~iGlGtw~~--------~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~~~r~~~~~~ 77 (324)
T 4gac_A 9 TGQKMPLIGLGTWKS--------EPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAVPREELFVT 77 (324)
T ss_dssp TSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSSBCGGGCEEE
T ss_pred CCCEeccceeECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhcccceecccccccc
Confidence 389999999999875 789999999999999999999999999 8999998
Q ss_pred -----------------------------------------------------------------HHHHHHHHHcCCcCE
Q 024724 61 -----------------------------------------------------------------IGEMKKLVEEGKIKY 75 (263)
Q Consensus 61 -----------------------------------------------------------------~~~l~~l~~~Gkir~ 75 (263)
|++|++|+++||||+
T Consensus 78 ~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~ 157 (324)
T 4gac_A 78 SKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVKA 157 (324)
T ss_dssp EEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHHHHHHHHHHHHTTSBSC
T ss_pred cccCCCCCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHCCCeeE
Confidence 679999999999999
Q ss_pred EEcCCCCHHHHHHHhcCC--CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccC
Q 024724 76 IGLSEASPDTIRRAHGVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFF 153 (263)
Q Consensus 76 iGvs~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~ 153 (263)
||+|||+.++++++.... .+.++|++||++.+ +.+++++|+++||++++|+||++|.++++......
T Consensus 158 iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a~spL~~g~~~~~~~~~~~--------- 226 (324)
T 4gac_A 158 LGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLA--QNELIAHCHARGLEVTAYSPLGSSDRAWRHPDEPV--------- 226 (324)
T ss_dssp EEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTCCGGGGGGSTTSCC---------
T ss_pred ecCCCCCHHHHHHHHHhCCCCcceeeeccCchhh--HHHHHHHHHHhceeeeecCCcccCccccCCCCCcc---------
Confidence 999999999999887764 45799999999887 57899999999999999999999998877322110
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCC
Q 024724 154 PRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVP 233 (263)
Q Consensus 154 ~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~ 233 (263)
+...+.+.++|+++|+|++|+||+|+++++ .+||+|+++++||+||+++++++||+||+++|+++.+
T Consensus 227 -----------~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~v~I~G~~~~~~l~eN~~a~~~~Ls~ee~~~id~l~~ 293 (324)
T 4gac_A 227 -----------LLEEPVVLALAEKHGRSPAQILLRWQVQRK--VICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNK 293 (324)
T ss_dssp -----------GGGCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCBCCCHHHHHHHTCCSSCCCCHHHHHHHHTTCC
T ss_pred -----------hhhHHHHHHHHHHhCCCHHHHHHHHHHHCC--CEEEECCCCHHHHHHHHhhCCCCCCHHHHHHHhccCc
Confidence 111257899999999999999999999999 5699999999999999999999999999999999988
Q ss_pred CCccC
Q 024724 234 IEEVA 238 (263)
Q Consensus 234 ~~~~~ 238 (263)
+.|..
T Consensus 294 ~~R~~ 298 (324)
T 4gac_A 294 NWRYI 298 (324)
T ss_dssp CCCCC
T ss_pred CCCcc
Confidence 76553
No 17
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-46 Score=327.51 Aligned_cols=195 Identities=24% Similarity=0.473 Sum_probs=178.0
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||.||||||++ +.+++.++|+.|+++|||+||||+.|| ||+.+|+
T Consensus 31 g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~I~TK~~~~ 99 (298)
T 3up8_A 31 GANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRADVFLTTKVWVD 99 (298)
T ss_dssp TCCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGGGCEEEEEECGG
T ss_pred CeecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChHHEEEEeccCCC
Confidence 68999999999987 468999999999999999999999999 8999998
Q ss_pred ----------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC--CceEE
Q 024724 61 ----------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH--PITAV 98 (263)
Q Consensus 61 ----------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~--~~~~~ 98 (263)
|++|++|+++||||+||||||+.++++++++.. +++++
T Consensus 100 ~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~ 179 (298)
T 3up8_A 100 NYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATN 179 (298)
T ss_dssp GCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhCCCCceEE
Confidence 999999999999999999999999999988764 78999
Q ss_pred eccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHc
Q 024724 99 QMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKY 178 (263)
Q Consensus 99 q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~ 178 (263)
|++||++.+ +.+++++|+++||++++|+||++|.|... +.+.++|+++
T Consensus 180 Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~l~~~------------------------------~~l~~ia~~~ 227 (298)
T 3up8_A 180 QVEYHPYLD--QTKVLQTARRLGMSLTSYYAMANGKVPAD------------------------------PLLTEIGGRH 227 (298)
T ss_dssp EEECBTTBC--CHHHHHHHHHHTCEEEEECTTGGGHHHHC------------------------------HHHHHHHHHH
T ss_pred EEecccccc--cHHHHHHHHHCCCEEEEECCCcCCccccc------------------------------chHHHHHHHc
Confidence 999999988 57899999999999999999999865322 4899999999
Q ss_pred CCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHh-CCCCccCCC
Q 024724 179 KCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDA-VPIEEVAGD 240 (263)
Q Consensus 179 g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~-~~~~~~~~~ 240 (263)
|+|++|+||+|++++|+|+ ||+|+++++|+++|+++++++||++|++.|+++ .++.++..+
T Consensus 228 g~s~aqvaL~w~l~~p~v~-~I~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~r~~~p 289 (298)
T 3up8_A 228 GKTAAQVALRWLVQQQDVI-VLSKTATEARLKENFAIFDFALTREEMAAVRELARPNGRIVNP 289 (298)
T ss_dssp TCCHHHHHHHHHHTSTTEE-EEECCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCTTCCCCCB
T ss_pred CCCHHHHHHHHHHHCCCcE-EEECCCCHHHHHHHHHhCCCCCCHHHHHHHHHHhccCCcccCC
Confidence 9999999999999998865 899999999999999999999999999999999 555454443
No 18
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=1.3e-45 Score=318.29 Aligned_cols=193 Identities=27% Similarity=0.411 Sum_probs=177.0
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||+++ +.+++.++|+.|+++||||||||+.|| +|+.+|+
T Consensus 14 g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i~TK~~~~ 83 (276)
T 3f7j_A 14 GVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREELFITSKVWNE 83 (276)
T ss_dssp SCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCSCGGGCEEEEEECGG
T ss_pred CCEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCCCcccEEEEEeeCCC
Confidence 789999999999873 568899999999999999999999999 7999997
Q ss_pred ---------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC--CceEEe
Q 024724 61 ---------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH--PITAVQ 99 (263)
Q Consensus 61 ---------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~--~~~~~q 99 (263)
|++|++|+++||||+||||||++++++++++.. ++.++|
T Consensus 84 ~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q 163 (276)
T 3f7j_A 84 DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQ 163 (276)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCcHHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhcCCCceeee
Confidence 999999999999999999999999999987753 457999
Q ss_pred ccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHcC
Q 024724 100 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKYK 179 (263)
Q Consensus 100 ~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g 179 (263)
++||++.+ +.+++++|+++||++++|+||++|.|... +.+.++|+++|
T Consensus 164 ~~~~~~~~--~~~l~~~~~~~gi~v~a~spl~~G~l~~~------------------------------~~l~~ia~~~g 211 (276)
T 3f7j_A 164 VEFHPRLT--QKELRDYCKGQGIQLEAWSPLMQGQLLDN------------------------------EVLTQIAEKHN 211 (276)
T ss_dssp EECBTTBC--CHHHHHHHHHHTCEEEEESTTGGGTTTTC------------------------------HHHHHHHHHHT
T ss_pred eeeccccC--CHHHHHHHHHCCCEEEEecCCCCCccCCC------------------------------HHHHHHHHHhC
Confidence 99999988 57899999999999999999999976432 48999999999
Q ss_pred CCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccC
Q 024724 180 CTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVA 238 (263)
Q Consensus 180 ~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~ 238 (263)
+|++|+||+|+++++ .++|+|+++++|+++|+++++++||++++++|+++.++.++.
T Consensus 212 ~t~aqval~w~l~~~--~v~i~g~~~~~~l~en~~a~~~~L~~e~~~~l~~l~~~~r~~ 268 (276)
T 3f7j_A 212 KSVAQVILRWDLQHG--VVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERVG 268 (276)
T ss_dssp CCHHHHHHHHHHHTT--CEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCSS
T ss_pred CCHHHHHHHHHHhCC--CEEeeCCCCHHHHHHHHhhCCCCCCHHHHHHHHhhccCCccC
Confidence 999999999999999 469999999999999999999999999999999998876553
No 19
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=3.3e-45 Score=317.78 Aligned_cols=193 Identities=23% Similarity=0.383 Sum_probs=176.1
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||+++. .+++.++|+.|+++||||||||+.|| +|+.+|+
T Consensus 18 g~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~~~~I~TK~~~~ 87 (288)
T 4f40_A 18 GVKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPREDVFITTKLWNT 87 (288)
T ss_dssp SCEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGGGCEEEEEECGG
T ss_pred CCeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChhhEEEEEecCCC
Confidence 7899999999999853 37899999999999999999999999 8999997
Q ss_pred -----------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC-
Q 024724 61 -----------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV- 92 (263)
Q Consensus 61 -----------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~- 92 (263)
|++|++|+++||||+||||||+.++++++++.
T Consensus 88 ~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 167 (288)
T 4f40_A 88 EQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMC 167 (288)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhC
Confidence 78999999999999999999999999999886
Q ss_pred -CCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHH
Q 024724 93 -HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRI 171 (263)
Q Consensus 93 -~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (263)
.+++++|++||++++. .+++++|+++||++++|+||++|.|.+. +.+
T Consensus 168 ~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~------------------------------~~l 215 (288)
T 4f40_A 168 TVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLGQGKLLSN------------------------------PIL 215 (288)
T ss_dssp SSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC--CGGGC------------------------------HHH
T ss_pred CCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEecCCCCCccccc------------------------------HHH
Confidence 4678999999999984 6899999999999999999999977542 478
Q ss_pred HHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccC
Q 024724 172 ENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVA 238 (263)
Q Consensus 172 ~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~ 238 (263)
.++|+++|+|++|+||+|+++++ .+||+|+++++|+++|+++++++||++++++|+++.++.+++
T Consensus 216 ~~ia~~~g~t~aqvaL~w~l~~~--~~~i~g~~~~~~l~en~~~~~~~L~~ee~~~i~~l~~~~r~~ 280 (288)
T 4f40_A 216 SAIGAKYNKTAAQVILRWNIQKN--LITIPKSVHRERIEENADIFDFELGAEDVMSIDALNTNSRYG 280 (288)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHTT--CEECCBCSSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCSS
T ss_pred HHHHHHhCCCHHHHHHHHHHhCC--CeEeeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhccCCccc
Confidence 99999999999999999999999 789999999999999999999999999999999998765543
No 20
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=3e-45 Score=320.54 Aligned_cols=192 Identities=27% Similarity=0.412 Sum_probs=176.8
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||+++ +.+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 48 g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~I~TK~~~~ 117 (310)
T 3b3e_A 48 GVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREELFITSKVWNE 117 (310)
T ss_dssp SCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHSSSCGGGCEEEEEECGG
T ss_pred CCeeCceeeeCCcCC-------CHHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHhcCCCcceEEEEEeCCCC
Confidence 789999999999873 468899999999999999999999999 7999997
Q ss_pred ---------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC--CceEEe
Q 024724 61 ---------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH--PITAVQ 99 (263)
Q Consensus 61 ---------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~--~~~~~q 99 (263)
|++|++|+++||||+||||||++++++++++.. ++.++|
T Consensus 118 ~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q 197 (310)
T 3b3e_A 118 DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQ 197 (310)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCcccHHHHHHHHHHHHHcCCcceEeecCCCHHHHHHHHHhcCCCcceee
Confidence 999999999999999999999999999987753 457999
Q ss_pred ccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHcC
Q 024724 100 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKYK 179 (263)
Q Consensus 100 ~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g 179 (263)
++||++.+ +.+++++|+++||++++|+||++|.|... +.+.++|+++|
T Consensus 198 ~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~l~~~------------------------------~~l~~iA~~~g 245 (310)
T 3b3e_A 198 VEFHPRLT--QKELRDYCKGQGIQLEAWSPLMQGQLLDN------------------------------EVLTQIAEKHN 245 (310)
T ss_dssp EECBTTBC--CHHHHHHHHHHTCEEEEESTTGGGTTTTC------------------------------HHHHHHHHHHT
T ss_pred eeccCccC--CHHHHHHHHHcCCEEEEeccccCCCcCCC------------------------------HHHHHHHHHhC
Confidence 99999988 57899999999999999999999976432 48999999999
Q ss_pred CCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCcc
Q 024724 180 CTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEV 237 (263)
Q Consensus 180 ~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~ 237 (263)
+|++|+||+|+++++ .++|+|+++++||++|+++++++||++|+++|+++.++.+.
T Consensus 246 ~t~aqvaL~w~l~~~--~v~I~gs~~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~r~ 301 (310)
T 3b3e_A 246 KSVAQVILRWDLQHG--VVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 301 (310)
T ss_dssp CCHHHHHHHHHHHTT--CEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred CCHHHHHHHHHHcCC--CeEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHhhhhCCcc
Confidence 999999999999999 45999999999999999999999999999999999887655
No 21
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=1.4e-44 Score=318.95 Aligned_cols=220 Identities=17% Similarity=0.250 Sum_probs=186.8
Q ss_pred CCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--------------------
Q 024724 1 MVLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-------------------- 60 (263)
Q Consensus 1 ~~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-------------------- 60 (263)
.|++||.||||||+++ ..+.+++.++|+.|+++||||||||+.|| +|+.+|+
T Consensus 13 tg~~v~~lglGt~~~~-----~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~R~~~~I~T 84 (324)
T 3ln3_A 13 DGHLIPALGFGTYXPX-----EVPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAGVVXREDLFVTT 84 (324)
T ss_dssp TSCEEESSEEECCCCT-----TSCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEE
T ss_pred CCCCcCCeeecCCccc-----CCChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccCCcccceeEEEe
Confidence 3789999999999974 23788999999999999999999999999 7999986
Q ss_pred ----------------------------------------------------------------HHHHHHHHHcCCcCEE
Q 024724 61 ----------------------------------------------------------------IGEMKKLVEEGKIKYI 76 (263)
Q Consensus 61 ----------------------------------------------------------------~~~l~~l~~~Gkir~i 76 (263)
|++|++|+++||||+|
T Consensus 85 K~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~i 164 (324)
T 3ln3_A 85 KLWCTCFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSI 164 (324)
T ss_dssp EECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred eeCCccCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCHHHHHHHHHHHHhcCCeeEE
Confidence 4799999999999999
Q ss_pred EcCCCCHHHHHHHhcCCC----ceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCccccc
Q 024724 77 GLSEASPDTIRRAHGVHP----ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHF 152 (263)
Q Consensus 77 Gvs~~~~~~l~~~~~~~~----~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~ 152 (263)
|||||+.++++++++... +.++|++||++.+ +.+++++|+++||++++|+||++|.+..-.. ...
T Consensus 165 GvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~g~~~~~~~-~~~-------- 233 (324)
T 3ln3_A 165 GVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVAYGALGTQRYXEWVD-QNS-------- 233 (324)
T ss_dssp EEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTSCCCCTTTSC-TTS--------
T ss_pred EecCCcHHHHHHHHHhcCccCCceeeEeeeCcccc--hHHHHHHHHHcCCEEEEecCCCCCCcccccc-cCC--------
Confidence 999999999999988743 6699999999987 5789999999999999999999997532110 000
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhC
Q 024724 153 FPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAV 232 (263)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~ 232 (263)
+. ....+.+.++|+++|+|++|+||+|+++++ .+||+|+++++||++|+++++++||++++++|+++.
T Consensus 234 -~~---------~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~--~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~l~ 301 (324)
T 3ln3_A 234 -PV---------LLNDPVLCDVAXXNXRSPALIALRYLIQRG--IVPLAQSFXENEMRENLQVFGFQLSPEDMXTLDGLN 301 (324)
T ss_dssp -CC---------GGGCHHHHHHHHHHTSCHHHHHHHHHHHTT--CEEEECCSSHHHHHHHGGGGGCCCCHHHHHHHHTTC
T ss_pred -cc---------hhcCHHHHHHHHhhCCCHHHHHHHHHHhCC--CEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhcc
Confidence 00 001258999999999999999999999998 579999999999999999999999999999999999
Q ss_pred CCCccCCCCCccccccccc
Q 024724 233 PIEEVAGDRDPEGFDKASW 251 (263)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~ 251 (263)
++.++....|+.....++|
T Consensus 302 ~~~r~~~~~~~~~~~~~p~ 320 (324)
T 3ln3_A 302 XNFRYLPAEFLVDHPEYPF 320 (324)
T ss_dssp CCCCSCCCGGGCSSTTCTT
T ss_pred cCCcccCchhhhcCCCCCC
Confidence 9888776666554333333
No 22
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=5.9e-45 Score=315.07 Aligned_cols=185 Identities=26% Similarity=0.419 Sum_probs=170.5
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 34 g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i~TK~~~~ 102 (283)
T 3o0k_A 34 GNHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGIARADIFLTTKLWNS 102 (283)
T ss_dssp SCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSSCGGGCEEEEEECGG
T ss_pred CCEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCCcccEEEEEccCCC
Confidence 78999999999987 578999999999999999999999999 7999998
Q ss_pred -----------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC--CCceE
Q 024724 61 -----------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV--HPITA 97 (263)
Q Consensus 61 -----------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~--~~~~~ 97 (263)
|++|++|+++||||+||||||+.++++++++. .++++
T Consensus 103 ~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~ 182 (283)
T 3o0k_A 103 DQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVL 182 (283)
T ss_dssp GCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSE
T ss_pred CCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEEeccCcHHHHHHHHHhCCCCeEE
Confidence 89999999999999999999999999998775 34579
Q ss_pred EeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHH
Q 024724 98 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKK 177 (263)
Q Consensus 98 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 177 (263)
+|++||++.+ +.+++++|+++||++++|+||++|.|... +.+.++|++
T Consensus 183 ~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~l~~~------------------------------~~l~~ia~~ 230 (283)
T 3o0k_A 183 NQIELHPQFQ--QDELRLFHGKHDIATEAWSPLGQGKLLED------------------------------PTLKSIAEK 230 (283)
T ss_dssp EEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCC-CTTC------------------------------HHHHHHHHH
T ss_pred EEeecCcccC--cHHHHHHHHHCCcEEEEecCCCCCccccc------------------------------hHHHHHHHH
Confidence 9999999998 56899999999999999999999976432 489999999
Q ss_pred cCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHh
Q 024724 178 YKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDA 231 (263)
Q Consensus 178 ~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~ 231 (263)
+|+|++|+||+|+++++. +||+|+++++|+++|+++++++||++|+++|+++
T Consensus 231 ~g~t~aqvaL~w~l~~~~--v~I~g~~~~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 231 HAKSVAQIILRWHIETGN--IVIPKSITPARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp HTSCHHHHHHHHHHHHTC--EECCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred hCCCHHHHHHHHHHHCCC--EEEeCCCCHHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 999999999999999994 5899999999999999999999999999999875
No 23
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=3.3e-44 Score=315.50 Aligned_cols=211 Identities=23% Similarity=0.368 Sum_probs=179.5
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 13 g~~vs~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~~~~i~TK 81 (317)
T 1qwk_A 13 GVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVKREELFITTK 81 (317)
T ss_dssp SCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCCGGGCEEEEE
T ss_pred CCEeCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCChhheEEEee
Confidence 78999999999975 688999999999999999999999999 6888875
Q ss_pred -----------------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHH
Q 024724 61 -----------------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIR 87 (263)
Q Consensus 61 -----------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~ 87 (263)
|++|++|+++||||+||||||+.++++
T Consensus 82 ~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~ 161 (317)
T 1qwk_A 82 AWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQIS 161 (317)
T ss_dssp ECTTTSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHH
T ss_pred eCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHHcCCeeEEEecCCCHHHHH
Confidence 579999999999999999999999999
Q ss_pred HHhcCC--CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhH
Q 024724 88 RAHGVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNK 165 (263)
Q Consensus 88 ~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
++++.. +++++|++||++.+ +.+++++|+++||++++|+||++|.|+ +.......+.+.+.. +. .
T Consensus 162 ~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~~~~~~~~~~-~~---------~ 228 (317)
T 1qwk_A 162 RALALGLTPVHNSQVELHLYFP--QHDHVDFCKKHNISVTSYATLGSPGRV-NFTLPTGQKLDWAPA-PS---------D 228 (317)
T ss_dssp HHHTTCSSCCCEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCSCCEE-CCBCTTCCBCCCEEC-SS---------G
T ss_pred HHHHhcCCccceecceeccccC--cHHHHHHHHHcCCEEEEecCccCCCcc-ccccccccccccccc-ch---------h
Confidence 998874 46899999999988 468999999999999999999999876 311111011111110 10 0
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccC
Q 024724 166 NIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVA 238 (263)
Q Consensus 166 ~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~ 238 (263)
...+.+.++|+++|+|++|+||+|+++++ .+||+|+++++||++|+++++++||++++++|+++.++.+..
T Consensus 229 ~~~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~vI~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~~ 299 (317)
T 1qwk_A 229 LQDQNVLALAEKTHKTPAQVLLRYALDRG--CAILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLF 299 (317)
T ss_dssp GGCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEEECCCCSHHHHHHHHCCSSCCCCHHHHHHHTTTCCCCCSC
T ss_pred hccHHHHHHHHHHCcCHHHHHHHHHHhCC--CeEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHHhhcCccc
Confidence 11268999999999999999999999998 699999999999999999999999999999999998875554
No 24
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=1.4e-44 Score=312.82 Aligned_cols=190 Identities=22% Similarity=0.349 Sum_probs=173.6
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||++ ..+++.++|+.|+++||||||||+.|| +|+.+|+
T Consensus 19 g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R~~v~i~TK~~~~ 87 (283)
T 2wzm_A 19 DNTLPVVGIGVGEL--------SDSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRDEIYVTTKLATP 87 (283)
T ss_dssp SCEEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCGGGCEEEEEECGG
T ss_pred CCEEcceeEECCCC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCcccEEEEeccCCC
Confidence 78999999999987 347899999999999999999999999 7999998
Q ss_pred -----------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC--CceE
Q 024724 61 -----------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH--PITA 97 (263)
Q Consensus 61 -----------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~--~~~~ 97 (263)
|++|++|+++||||+||||||++++++++++.. ++++
T Consensus 88 ~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~ 167 (283)
T 2wzm_A 88 DQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAV 167 (283)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHCCCCSE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhcCCCccc
Confidence 899999999999999999999999999988753 4599
Q ss_pred EeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHH
Q 024724 98 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKK 177 (263)
Q Consensus 98 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 177 (263)
+|++||++.+. .+++++|+++||++++|+||++|.+... +.+.++|++
T Consensus 168 ~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~------------------------------~~l~~ia~~ 215 (283)
T 2wzm_A 168 NQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGRLLDH------------------------------PAVTAIAEA 215 (283)
T ss_dssp EEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTGGGGC------------------------------HHHHHHHHH
T ss_pred ccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCcccch------------------------------HHHHHHHHH
Confidence 99999999984 5799999999999999999999843211 479999999
Q ss_pred cCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCc
Q 024724 178 YKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEE 236 (263)
Q Consensus 178 ~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 236 (263)
+|+|++|+||+|+++++ .+||+|+++++||++|+++++++||++++++|+++.++.+
T Consensus 216 ~g~s~aqvaL~w~l~~~--~~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~~ 272 (283)
T 2wzm_A 216 HGRTAAQVLLRWSIQLG--NVVISRSANPERIASNLDVFGFELTADEMETLNGLDDGTR 272 (283)
T ss_dssp HTCCHHHHHHHHHHHTT--CEEEECCSSHHHHHHHHCCSSCCCCHHHHHHHHTCCCCCC
T ss_pred hCCCHHHHHHHHHHHCC--CEEEeCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCC
Confidence 99999999999999997 4899999999999999999999999999999999987644
No 25
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=6.1e-44 Score=313.72 Aligned_cols=206 Identities=26% Similarity=0.364 Sum_probs=177.9
Q ss_pred CCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--------------------
Q 024724 1 MVLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-------------------- 60 (263)
Q Consensus 1 ~~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-------------------- 60 (263)
.|++||.||||||++ +.+++.++|+.|+++||||||||+.|| +|+.+|+
T Consensus 9 tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~R~~v~I~T 77 (316)
T 3o3r_A 9 TKAKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVRREDLFIVS 77 (316)
T ss_dssp TSCEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEE
T ss_pred CCCEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCChHHcEEEe
Confidence 378999999999975 567899999999999999999999999 7999986
Q ss_pred ----------------------------------------------------------------HHHHHHHHHcCCcCEE
Q 024724 61 ----------------------------------------------------------------IGEMKKLVEEGKIKYI 76 (263)
Q Consensus 61 ----------------------------------------------------------------~~~l~~l~~~Gkir~i 76 (263)
|++|++|+++||||+|
T Consensus 78 K~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~i 157 (316)
T 3o3r_A 78 KLWSTFFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKAL 157 (316)
T ss_dssp EECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSEEEE
T ss_pred eeCCCcCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHcCCCcEE
Confidence 4799999999999999
Q ss_pred EcCCCCHHHHHHHhcCC----CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCccccc
Q 024724 77 GLSEASPDTIRRAHGVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHF 152 (263)
Q Consensus 77 Gvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~ 152 (263)
|||||+.++++++++.. +++++|++||++.+ +.+++++|+++||++++|+||++|..... . +. .
T Consensus 158 GvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~~~~~--~---~~-~---- 225 (316)
T 3o3r_A 158 GVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLT--QEKLIQYCHSKGIAVIAYSPLGSPDRPYA--K---PE-D---- 225 (316)
T ss_dssp EEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CHHHHHHHHTTTCEEEEECTTCCTTCTTC--C---TT-S----
T ss_pred EEecCCHHHHHHHHHhCCCCCCceEeeccCCcccc--hHHHHHHHHHcCCEEEEecccCCCCCccc--c---cc-c----
Confidence 99999999999998864 47899999999988 57899999999999999999999831110 0 00 0
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhC
Q 024724 153 FPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAV 232 (263)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~ 232 (263)
+.+. ..+.+.++|+++|+|++|+||+|+++++ .+||+|+++++||++|+++++++||++++++|+++.
T Consensus 226 -~~~~---------~~~~l~~ia~~~g~t~aqvaL~w~l~~~--~~vi~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~ 293 (316)
T 3o3r_A 226 -PVVL---------EIPKIKEIAAKHKKTIAQVLIRFHVQRN--VAVIPKSVTLSHIKENIQVFDFQLSEEDMAAILSLN 293 (316)
T ss_dssp -CCST---------TCHHHHHHHHHHTCCHHHHHHHHHHTTT--CEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTC
T ss_pred -hhhh---------cCHHHHHHHHHhCCCHHHHHHHHHHhCC--CEEeCCCCCHHHHHHHHhhCCCCcCHHHHHHHHccc
Confidence 0000 0158999999999999999999999998 579999999999999999999999999999999999
Q ss_pred CCCccCCCC
Q 024724 233 PIEEVAGDR 241 (263)
Q Consensus 233 ~~~~~~~~~ 241 (263)
++.+.....
T Consensus 294 ~~~r~~~~~ 302 (316)
T 3o3r_A 294 RNWRACGLF 302 (316)
T ss_dssp CCCCCCSCG
T ss_pred cCCcccccc
Confidence 887775543
No 26
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=4.6e-44 Score=309.28 Aligned_cols=191 Identities=25% Similarity=0.401 Sum_probs=174.3
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||+++ +.+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 17 g~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~~~i~TK~~~~ 86 (281)
T 1vbj_A 17 GVMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVPREELFVTTKLWNS 86 (281)
T ss_dssp SCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSCGGGCEEEEEECGG
T ss_pred CCeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCChhHEEEEeccCCC
Confidence 789999999999874 457899999999999999999999999 7999998
Q ss_pred ---------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC--CceEEe
Q 024724 61 ---------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH--PITAVQ 99 (263)
Q Consensus 61 ---------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~--~~~~~q 99 (263)
|++|++|+++||||+||||||++++++++++.. +++++|
T Consensus 87 ~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q 166 (281)
T 1vbj_A 87 DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPGKDKFIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQ 166 (281)
T ss_dssp GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCCSSCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSCSSCCSEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCCCHHHHHHHHHHHHHCCCccEEEeeCCCHHHHHHHHHhCCCCceeee
Confidence 899999999999999999999999999998864 458999
Q ss_pred ccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHcC
Q 024724 100 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKYK 179 (263)
Q Consensus 100 ~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g 179 (263)
++||++.+. .+++++|+++||++++|+||++|.+... +.+.++|+++|
T Consensus 167 ~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~~------------------------------~~l~~ia~~~g 214 (281)
T 1vbj_A 167 IELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGHLVED------------------------------ARLKAIGGKYG 214 (281)
T ss_dssp EECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGTTTTC------------------------------HHHHHHHHTTT
T ss_pred EEeccccCC--HHHHHHHHHcCCEEEEecCCcCCCCCCC------------------------------HHHHHHHHHhC
Confidence 999999884 6799999999999999999999842111 48999999999
Q ss_pred CCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCc
Q 024724 180 CTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEE 236 (263)
Q Consensus 180 ~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 236 (263)
+|++|+||+|+++++ .+||+|+++++||++|+++++++||++++++|+++.++.+
T Consensus 215 ~s~aqvaL~w~l~~~--~~~I~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~ 269 (281)
T 1vbj_A 215 KTAAQVMLRWEIQAG--VITIPKSGNEARIKENGNIFDFELTAEDIQVIDGMNAGHR 269 (281)
T ss_dssp CCHHHHHHHHHHHTT--CEECCBCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHHHCC--CEEecCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccCC
Confidence 999999999999996 5899999999999999999999999999999999987644
No 27
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=7.2e-44 Score=314.12 Aligned_cols=206 Identities=25% Similarity=0.322 Sum_probs=178.6
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||++|. .+.+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 13 g~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~I~TK 84 (323)
T 1afs_A 13 GNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGTVKREDIFYTSK 84 (323)
T ss_dssp SCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTSCCGGGCEEEEE
T ss_pred CCeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcCCCChHHeEEEEe
Confidence 7899999999998752 2678899999999999999999999999 6888876
Q ss_pred ---------------------------------H------------------------------HHHHHHHHcCCcCEEE
Q 024724 61 ---------------------------------I------------------------------GEMKKLVEEGKIKYIG 77 (263)
Q Consensus 61 ---------------------------------~------------------------------~~l~~l~~~Gkir~iG 77 (263)
| ++|++|+++||||+||
T Consensus 85 ~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iG 164 (323)
T 1afs_A 85 LWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIG 164 (323)
T ss_dssp ECGGGCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred cCCCcCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHcCCcCEEE
Confidence 1 3799999999999999
Q ss_pred cCCCCHHHHHHHhcCC----CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccC
Q 024724 78 LSEASPDTIRRAHGVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFF 153 (263)
Q Consensus 78 vs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~ 153 (263)
||||+.++++++++.. +++++|++||++.+. .+++++|+++||++++|+||++|.|++- .....
T Consensus 165 vSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~~-~~~~~--------- 232 (323)
T 1afs_A 165 VSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVSYCTLGSSRDKTW-VDQKS--------- 232 (323)
T ss_dssp EESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCCCCTTT-SCTTS---------
T ss_pred eeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEEecCccCCccccc-cccCC---------
Confidence 9999999999998874 559999999999884 6899999999999999999999998752 11000
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCC
Q 024724 154 PRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVP 233 (263)
Q Consensus 154 ~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~ 233 (263)
+.+ + ..+.+.++|+++|+|++|+||+|+++++ ++||+|+++++||++|+++++++||++++++|+++.+
T Consensus 233 ~~~--------~-~~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~ 301 (323)
T 1afs_A 233 PVL--------L-DDPVLCAIAKKYKQTPALVALRYQLQRG--VVPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLNR 301 (323)
T ss_dssp CCG--------G-GCHHHHHHHHHTTCCHHHHHHHHHHHTT--CEEEECCSCHHHHHHHTTTTSCCCCHHHHHHHHTTCC
T ss_pred cch--------h-cCHHHHHHHHHhCCCHHHHHHHHHHhCC--CEEeeCCCCHHHHHHHHhhccCCCCHHHHHHHHhhcc
Confidence 100 0 1268999999999999999999999998 6899999999999999999999999999999999987
Q ss_pred CCccC
Q 024724 234 IEEVA 238 (263)
Q Consensus 234 ~~~~~ 238 (263)
+.+.+
T Consensus 302 ~~~~~ 306 (323)
T 1afs_A 302 NFRYN 306 (323)
T ss_dssp CCCSC
T ss_pred cCCcc
Confidence 65543
No 28
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=4.1e-44 Score=309.35 Aligned_cols=191 Identities=25% Similarity=0.368 Sum_probs=171.1
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||+++ .+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 11 g~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~~~i~TK~~~~ 79 (278)
T 1hw6_A 11 GNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDDLFITTKLWND 79 (278)
T ss_dssp SCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGGCEEEEEECCC
T ss_pred CCccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChhhEEEEEeeCCC
Confidence 789999999999873 46899999999999999999999999 7999998
Q ss_pred -----------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC--CCceE
Q 024724 61 -----------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV--HPITA 97 (263)
Q Consensus 61 -----------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~--~~~~~ 97 (263)
|++|++|+++||||+||||||+.++++++++. .++++
T Consensus 80 ~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~ 159 (278)
T 1hw6_A 80 RHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAV 159 (278)
T ss_dssp -----CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhcCCCcee
Confidence 89999999999999999999999999998875 34589
Q ss_pred EeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHH
Q 024724 98 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKK 177 (263)
Q Consensus 98 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 177 (263)
+|++||++.+. .+++++|+++||++++|+||++|. ++ + +.. +.+.++|++
T Consensus 160 ~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~--~~-----~-----------~~~----------~~l~~ia~~ 209 (278)
T 1hw6_A 160 NQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQGK--YD-----L-----------FGA----------EPVTAAAAA 209 (278)
T ss_dssp EEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGS--SC-----C-----------TTS----------HHHHHHHHH
T ss_pred EEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCCC--cc-----c-----------ccc----------HHHHHHHHH
Confidence 99999999985 689999999999999999999983 11 0 000 479999999
Q ss_pred cCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCC
Q 024724 178 YKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIE 235 (263)
Q Consensus 178 ~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 235 (263)
+|+|++|+||+|+++++ .+||+|+++++||++|+++++++||++++++|+++.++.
T Consensus 210 ~g~s~aqvaL~w~l~~~--v~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~ 265 (278)
T 1hw6_A 210 HGKTPAQAVLRWHLQKG--FVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDPGD 265 (278)
T ss_dssp HTCCHHHHHHHHHHHTT--CBBCCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCC--
T ss_pred hCCCHHHHHHHHHHHCC--CEEEcCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccC
Confidence 99999999999999996 489999999999999999999999999999999998653
No 29
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=1.4e-43 Score=308.05 Aligned_cols=192 Identities=29% Similarity=0.376 Sum_probs=173.3
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||++ ..+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 33 g~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R~~v~I~TK~~~~ 101 (296)
T 1mzr_A 33 GNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNREELFITTKLWND 101 (296)
T ss_dssp SCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGGGCEEEEEECGG
T ss_pred CCeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCcccEEEEeccCCC
Confidence 78999999999987 468899999999999999999999999 7999997
Q ss_pred ---------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC--CCceEEe
Q 024724 61 ---------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV--HPITAVQ 99 (263)
Q Consensus 61 ---------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~--~~~~~~q 99 (263)
|++|++|+++||||+||||||++++++++++. .+++++|
T Consensus 102 ~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q 181 (296)
T 1mzr_A 102 DHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQ 181 (296)
T ss_dssp GTTCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEE
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHHhcCCCceEEe
Confidence 89999999999999999999999999998764 4568999
Q ss_pred ccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHcC
Q 024724 100 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKYK 179 (263)
Q Consensus 100 ~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g 179 (263)
++||++.+. .+++++|+++||++++|+||++|.+. .+. .+.+.++|+++|
T Consensus 182 ~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~~~------~l~----------------------~~~l~~ia~~~g 231 (296)
T 1mzr_A 182 IELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGGKG------VFD----------------------QKVIRDLADKYG 231 (296)
T ss_dssp EECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTCTT------TTT----------------------SHHHHHHHHHHT
T ss_pred eecccccCC--HHHHHHHHHCCCeEEEeccccCCcch------hcC----------------------hHHHHHHHHHhC
Confidence 999999984 67999999999999999999998431 000 047899999999
Q ss_pred CCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCc
Q 024724 180 CTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEE 236 (263)
Q Consensus 180 ~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~ 236 (263)
+|++|+||+|+++++ .+||+|+++++||++|+++++++||++++++|+++.+..+
T Consensus 232 ~s~aqvaL~w~l~~~--v~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~~ 286 (296)
T 1mzr_A 232 KTPAQIVIRWHLDSG--LVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKR 286 (296)
T ss_dssp CCHHHHHHHHHHHTT--CEECCBCCCHHHHHHTTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHHhCC--CEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhhcCC
Confidence 999999999999996 4899999999999999999999999999999999987644
No 30
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=2.6e-43 Score=310.89 Aligned_cols=207 Identities=23% Similarity=0.349 Sum_probs=178.4
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||.||||||++|+ ..+.+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 15 g~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~i~TK 87 (326)
T 3buv_A 15 GNSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGKVRREDIFYCGK 87 (326)
T ss_dssp SCEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEE
T ss_pred CCeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCCCChhHeEEEee
Confidence 7899999999999763 23678899999999999999999999999 6888876
Q ss_pred ---------------------------------H------------------------------HHHHHHHHcCCcCEEE
Q 024724 61 ---------------------------------I------------------------------GEMKKLVEEGKIKYIG 77 (263)
Q Consensus 61 ---------------------------------~------------------------------~~l~~l~~~Gkir~iG 77 (263)
| ++|++|+++||||+||
T Consensus 88 ~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iG 167 (326)
T 3buv_A 88 LWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLG 167 (326)
T ss_dssp ECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred eCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccHHHHHHHHHHHHHcCCccEEE
Confidence 1 3899999999999999
Q ss_pred cCCCCHHHHHHHhcCCC----ceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccC
Q 024724 78 LSEASPDTIRRAHGVHP----ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFF 153 (263)
Q Consensus 78 vs~~~~~~l~~~~~~~~----~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~ 153 (263)
||||+.++++++++... ++++|++||++.+ +.+++++|+++||++++|+||++|.|+ +... +. +
T Consensus 168 vSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~---~~-~----- 235 (326)
T 3buv_A 168 VSNFNRRQLELILNKPGLKHKPVSNQVECHPYFT--QPKLLKFCQQHDIVITAYSPLGTSRNP-IWVN---VS-S----- 235 (326)
T ss_dssp EESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCCCCT-TTSC---TT-S-----
T ss_pred EeCCCHHHHHHHHHhCCCCCCCeeeeeecccccC--cHHHHHHHHHcCCEEEEeccccCCccc-cccc---cC-C-----
Confidence 99999999999988744 6799999999987 468999999999999999999999886 3111 00 0
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCC
Q 024724 154 PRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVP 233 (263)
Q Consensus 154 ~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~ 233 (263)
+.+ + ..+.+.++|+++|+|++|+||+|+++++ ++||+|+++++||++|+++++++||++++++|+++.+
T Consensus 236 ~~~--------~-~~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~ 304 (326)
T 3buv_A 236 PPL--------L-KDALLNSLGKRYNKTAAQIVLRFNIQRG--VVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNK 304 (326)
T ss_dssp CCG--------G-GCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCC
T ss_pred ccc--------c-ccHHHHHHHHHhCCCHHHHHHHHHHhCC--CEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhcc
Confidence 100 0 1268999999999999999999999998 6899999999999999999999999999999999987
Q ss_pred CCccC
Q 024724 234 IEEVA 238 (263)
Q Consensus 234 ~~~~~ 238 (263)
+.+.+
T Consensus 305 ~~~~~ 309 (326)
T 3buv_A 305 NVRFV 309 (326)
T ss_dssp SCCSC
T ss_pred CCccc
Confidence 65543
No 31
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=2e-43 Score=307.35 Aligned_cols=191 Identities=26% Similarity=0.411 Sum_probs=172.4
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||++ ..+++.++|+.|++.|||+||||+.|| +|+.+|+
T Consensus 23 g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~~v~I~TK 91 (298)
T 1vp5_A 23 GVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRREELFVTTK 91 (298)
T ss_dssp SCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEE
T ss_pred CCCccCeeEeCCcC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCChhhEEEEec
Confidence 78999999999986 357899999999999999999999999 7988886
Q ss_pred ------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC--Cce
Q 024724 61 ------------------------------------------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH--PIT 96 (263)
Q Consensus 61 ------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~--~~~ 96 (263)
|++|++|+++||||+||||||++++++++++.. +++
T Consensus 92 ~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~ 171 (298)
T 1vp5_A 92 LWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFGDVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPA 171 (298)
T ss_dssp ECGGGCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCS
T ss_pred cCCCCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCce
Confidence 899999999999999999999999999998864 459
Q ss_pred EEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHH
Q 024724 97 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAK 176 (263)
Q Consensus 97 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~ 176 (263)
++|++||++.+. .+++++|+++||++++|+||++|. +. .+. -+.+.++|+
T Consensus 172 v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~--~~----------------~l~----------~~~l~~ia~ 221 (298)
T 1vp5_A 172 VNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGR--KN----------------IFQ----------NGVLRSIAE 221 (298)
T ss_dssp EEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGG--GG----------------GGG----------CHHHHHHHH
T ss_pred EEEEecccccCC--HHHHHHHHHCCCEEEEecccccCC--cc----------------ccC----------cHHHHHHHH
Confidence 999999999984 679999999999999999999983 10 000 047899999
Q ss_pred HcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCC
Q 024724 177 KYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIE 235 (263)
Q Consensus 177 ~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 235 (263)
++|+|++|+||+|+++++ .+||+|+++++||++|+++++++||++++++|+++.+..
T Consensus 222 ~~g~s~aqvaL~w~l~~~--v~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 278 (298)
T 1vp5_A 222 KYGKTVAQVILRWLTQKG--IVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQ 278 (298)
T ss_dssp HHTCCHHHHHHHHHHHTT--CEECCCCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCSS
T ss_pred HhCCCHHHHHHHHHHhCC--CEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccc
Confidence 999999999999999997 489999999999999999999999999999999998764
No 32
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=2.2e-43 Score=309.67 Aligned_cols=204 Identities=25% Similarity=0.376 Sum_probs=179.0
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+|||||++++. +.+++.++|+.|+++||||||||+.|| ||+.+|+
T Consensus 17 g~~v~~lglGt~~~~~------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~~~g~~~R~~~~i~TK 87 (312)
T 1zgd_A 17 QLKMPVVGMGSAPDFT------CKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAIELGLVTRDDLFVTSK 87 (312)
T ss_dssp CCEEESBCBCCSCCTT------CCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEE
T ss_pred CCCCCceeEcCcccCC------CHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCCCcchheEEEec
Confidence 7899999999955321 456899999999999999999999999 7988885
Q ss_pred ------------------------------------------------------------HHHHHHHHHcCCcCEEEcCC
Q 024724 61 ------------------------------------------------------------IGEMKKLVEEGKIKYIGLSE 80 (263)
Q Consensus 61 ------------------------------------------------------------~~~l~~l~~~Gkir~iGvs~ 80 (263)
|++|++|+++||||+|||||
T Consensus 88 ~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn 167 (312)
T 1zgd_A 88 LWVTENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVSN 167 (312)
T ss_dssp ECGGGCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHHHHHTTSBSCEEEES
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHHHHHHHHHHHHcCCCCEEEEeC
Confidence 25899999999999999999
Q ss_pred CCHHHHHHHhcCC--CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCC
Q 024724 81 ASPDTIRRAHGVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKG 158 (263)
Q Consensus 81 ~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
|+.++++++++.. +++++|++||++.+ +.+++++|+++||++++|+||++|.+.+. + +.+.
T Consensus 168 ~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spl~~G~~~~~--~------------~~~~- 230 (312)
T 1zgd_A 168 FSVKKLENLLSVATVLPAVNQVEMNLAWQ--QKKLREFCNAHGIVLTAFSPVRKGASRGP--N------------EVME- 230 (312)
T ss_dssp CCHHHHHHHHTTCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTTTTTTTSS--C------------TTTT-
T ss_pred CCHHHHHHHHHhCCCCceEEeeecCcccC--CHHHHHHHHHcCCEEEEecCCCCCCCCCC--c------------cccc-
Confidence 9999999998874 67999999999998 46899999999999999999998865431 0 0000
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccC
Q 024724 159 ENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVA 238 (263)
Q Consensus 159 ~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~ 238 (263)
.+.+.++|+++|+|++|+||+|+++++ ++||+|+++++||++|+++++++||++++++|+++.++.++.
T Consensus 231 ---------~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~ 299 (312)
T 1zgd_A 231 ---------NDMLKEIADAHGKSVAQISLRWLYEQG--VTFVPKSYDKERMNQNLRIFDWSLTKEDHEKIAQIKQNRLIP 299 (312)
T ss_dssp ---------CHHHHHHHHHHTSCHHHHHHHHHHHTT--CEECCCCCSHHHHHHTTCCSSCCCCHHHHHHHTTSCCCCSCC
T ss_pred ---------cHHHHHHHHHcCCCHHHHHHHHHHHCC--CEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHhccCccC
Confidence 158999999999999999999999997 589999999999999999999999999999999999888888
Q ss_pred CCCC
Q 024724 239 GDRD 242 (263)
Q Consensus 239 ~~~~ 242 (263)
|.++
T Consensus 300 ~~~~ 303 (312)
T 1zgd_A 300 GPTK 303 (312)
T ss_dssp CSEE
T ss_pred CCCC
Confidence 8765
No 33
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-43 Score=312.98 Aligned_cols=205 Identities=22% Similarity=0.296 Sum_probs=179.7
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||++ +.+++.++|+.|+++|||+||||+.|| ||+.+|+
T Consensus 33 g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~~R~~v~I~TK 101 (335)
T 3h7u_A 33 GAKFPSVGLGTWQA--------SPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFEDRVVKREDLFITSK 101 (335)
T ss_dssp SCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEE
T ss_pred CCEecceeEeCCcC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHhcCCCCcceeEEEee
Confidence 78999999999975 678999999999999999999999999 8999886
Q ss_pred ----------------------------------------------------------HHHHHHHHHcCCcCEEEcCCCC
Q 024724 61 ----------------------------------------------------------IGEMKKLVEEGKIKYIGLSEAS 82 (263)
Q Consensus 61 ----------------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~ 82 (263)
|++|++|+++||||+||||||+
T Consensus 102 ~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~ 181 (335)
T 3h7u_A 102 LWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFS 181 (335)
T ss_dssp ECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCC
T ss_pred eCCCCCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHHHHHHHHHHHcCCccEEEecCCC
Confidence 3699999999999999999999
Q ss_pred HHHHHHHhcC--CCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcc
Q 024724 83 PDTIRRAHGV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGEN 160 (263)
Q Consensus 83 ~~~l~~~~~~--~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
.++++++++. .+++++|++||++.+. .+++++|+++||++++|+||++|.+.-. .... +
T Consensus 182 ~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~sPL~~g~~~~~-------~~~~------~---- 242 (335)
T 3h7u_A 182 TKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSAYSPLGSPGTTWL-------KSDV------L---- 242 (335)
T ss_dssp HHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTTCTTS-------CCCG------G----
T ss_pred HHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEEeccCcCCCCCCC-------Cccc------c----
Confidence 9999998875 4568999999999984 6899999999999999999997632100 0000 0
Q ss_pred hhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccCCC
Q 024724 161 LDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVAGD 240 (263)
Q Consensus 161 ~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~~~ 240 (263)
..+.+.++|+++|+|++|+||+|+++++ ++||+|+++++||++|+++++++||++++++|+++.+..++.+.
T Consensus 243 ------~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g~~~~~~l~enl~a~~~~L~~e~~~~i~~l~~~~~~~~~ 314 (335)
T 3h7u_A 243 ------KNPILNMVAEKLGKSPAQVALRWGLQMG--HSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQARLVTGS 314 (335)
T ss_dssp ------GCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCBCSCHHHHHHHHCCSSCCCCHHHHHHGGGSCCCCSCCCG
T ss_pred ------ccHHHHHHHHHHCcCHHHHHHHHHHHCC--CEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhHhhcCccccc
Confidence 0158999999999999999999999998 79999999999999999999999999999999999988777776
Q ss_pred CCcc
Q 024724 241 RDPE 244 (263)
Q Consensus 241 ~~~~ 244 (263)
.|.+
T Consensus 315 ~~~~ 318 (335)
T 3h7u_A 315 FLVH 318 (335)
T ss_dssp GGBC
T ss_pred eecc
Confidence 6543
No 34
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=7.9e-43 Score=306.63 Aligned_cols=203 Identities=25% Similarity=0.319 Sum_probs=176.2
Q ss_pred CCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--------------------
Q 024724 1 MVLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-------------------- 60 (263)
Q Consensus 1 ~~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-------------------- 60 (263)
.|++||+||||||++ +.+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 9 tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~I~T 77 (316)
T 1us0_A 9 NGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVKREELFIVS 77 (316)
T ss_dssp TSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSCGGGCEEEE
T ss_pred CCCEECCEeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCChhHeEEEE
Confidence 378999999999874 788999999999999999999999999 6888875
Q ss_pred ----------------------------------H------------------------------HHHHHHHHcCCcCEE
Q 024724 61 ----------------------------------I------------------------------GEMKKLVEEGKIKYI 76 (263)
Q Consensus 61 ----------------------------------~------------------------------~~l~~l~~~Gkir~i 76 (263)
| ++|++|+++||||+|
T Consensus 78 K~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~i 157 (316)
T 1us0_A 78 KLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAI 157 (316)
T ss_dssp EECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBSCE
T ss_pred eeCCCcCCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHHHHHHHHHHHCCCccEE
Confidence 1 389999999999999
Q ss_pred EcCCCCHHHHHHHhcCC----CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCccccc
Q 024724 77 GLSEASPDTIRRAHGVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHF 152 (263)
Q Consensus 77 Gvs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~ 152 (263)
|||||+.++++++++.. +++++|++||++.+ +.+++++|+++||++++|+||++|.+.-. ....
T Consensus 158 GvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~G~l~~~--~~~~-------- 225 (316)
T 1us0_A 158 GISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLT--QEKLIQYCQSKGIVVTAYSPLGSPDRPWA--KPED-------- 225 (316)
T ss_dssp EEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCTTCTTC--CTTS--------
T ss_pred EEecCCHHHHHHHHHhCcccCCceeeehhcCCccC--CHHHHHHHHHcCCEEEEecccccCccccc--cCCC--------
Confidence 99999999999998874 45999999999987 46899999999999999999999976211 0000
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhC
Q 024724 153 FPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAV 232 (263)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~ 232 (263)
+.+. ..+.+.++|+++|+|++|+||+|+++++ ++||+|+++++||++|+++++++||++++++|+++.
T Consensus 226 -~~~~---------~~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~ 293 (316)
T 1us0_A 226 -PSLL---------EDPRIKAIAAKHNKTTAQVLIRFPMQRN--LVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYN 293 (316)
T ss_dssp -CCTT---------TCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTC
T ss_pred -cccc---------cCHHHHHHHHHhCCCHHHHHHHHHHHCC--CEEEeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhc
Confidence 1110 0158999999999999999999999998 699999999999999999999999999999999998
Q ss_pred CCCccC
Q 024724 233 PIEEVA 238 (263)
Q Consensus 233 ~~~~~~ 238 (263)
++.+.+
T Consensus 294 ~~~~~~ 299 (316)
T 1us0_A 294 RNWRVC 299 (316)
T ss_dssp CCCCSC
T ss_pred cCCccc
Confidence 775544
No 35
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=4.3e-43 Score=310.07 Aligned_cols=205 Identities=26% Similarity=0.314 Sum_probs=177.4
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||.||||||.+|. .+.+++.++|+.|+++|||+||||+.|| +|+.+|+
T Consensus 13 g~~v~~lglGt~~~~~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~~~R~~~~I~TK 84 (331)
T 1s1p_A 13 GHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIFYTSK 84 (331)
T ss_dssp SCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEE
T ss_pred CCEeCCeeEcCccCCC-----CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCCCCchheEEEec
Confidence 7899999999998742 2678899999999999999999999999 6888875
Q ss_pred ---------------------------------H------------------------------HHHHHHHHcCCcCEEE
Q 024724 61 ---------------------------------I------------------------------GEMKKLVEEGKIKYIG 77 (263)
Q Consensus 61 ---------------------------------~------------------------------~~l~~l~~~Gkir~iG 77 (263)
| ++|++|+++||||+||
T Consensus 85 ~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gkir~iG 164 (331)
T 1s1p_A 85 LWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIG 164 (331)
T ss_dssp ECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred cCCccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHHHHHHHHHHHHHcCCccEEE
Confidence 1 4899999999999999
Q ss_pred cCCCCHHHHHHHhcCC----CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccC
Q 024724 78 LSEASPDTIRRAHGVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFF 153 (263)
Q Consensus 78 vs~~~~~~l~~~~~~~----~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~ 153 (263)
||||+.++++++++.. +++++|++||++.+. .+++++|+++||++++|+||++|.|++- .. +. +
T Consensus 165 vSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~~~-~~---~~-~----- 232 (331)
T 1s1p_A 165 VSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQRDKRW-VD---PN-S----- 232 (331)
T ss_dssp EESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCCCCTTT-SC---TT-S-----
T ss_pred EeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEEeccccCCccccc-cc---CC-C-----
Confidence 9999999999998874 569999999999884 6899999999999999999999988752 11 00 0
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCC
Q 024724 154 PRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVP 233 (263)
Q Consensus 154 ~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~ 233 (263)
+.+ + ..+.+.++|+++|+|++|+||+|+++++ ++||+|+++++||++|+++++++||++++++|+++.+
T Consensus 233 ~~~--------~-~~~~l~~ia~~~g~s~aqvaL~w~l~~~--~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~ 301 (331)
T 1s1p_A 233 PVL--------L-EDPVLCALAKKHKRTPALIALRYQLQRG--VVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDR 301 (331)
T ss_dssp CCG--------G-GCHHHHHHHHHHTSCHHHHHHHHHHHTT--CEEEEECCSHHHHHHHGGGGGCCCCHHHHHHHHTTCC
T ss_pred ccc--------c-cCHHHHHHHHHhCCCHHHHHHHHHHhCC--CEEeeCCCCHHHHHHHhhhcCCCcCHHHHHHHHHHhc
Confidence 100 0 0168999999999999999999999998 6899999999999999999999999999999999987
Q ss_pred CCcc
Q 024724 234 IEEV 237 (263)
Q Consensus 234 ~~~~ 237 (263)
+.+.
T Consensus 302 ~~~~ 305 (331)
T 1s1p_A 302 NLHY 305 (331)
T ss_dssp CCCS
T ss_pred CCcc
Confidence 6544
No 36
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=5.6e-43 Score=304.05 Aligned_cols=177 Identities=25% Similarity=0.293 Sum_probs=157.2
Q ss_pred CcccccceeccccCCC--------CCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh-------------
Q 024724 2 VLQVSKLGLGCMNLSS--------GYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~--------~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~------------- 60 (263)
|++||+||||||++|+ .|+. .+++++.++|+.|+++|||+||||+.|| .||+.+|+
T Consensus 39 g~~vs~lglGt~~~g~~~~~~~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~lG~al~~~R~~v~I~T 115 (292)
T 4exb_A 39 GLAVSPLGLGTVKFGRDQGVKYPSGFTI-PDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLLRGQREHWVIVS 115 (292)
T ss_dssp SCEECSEEEECSTTTCC---------CC-CCHHHHHHHHHHHHHTTCCEEECCTTST--THHHHHHHHHTTTGGGCEEEE
T ss_pred CCccCCEeEcccccCCCcccccccccCC-CCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHHHHHHhccCCCcEEEEE
Confidence 7899999999999986 3444 3789999999999999999999999998 79999998
Q ss_pred --------------------------------------------------------HHHHHHHHHcCCcCEEEcCCCCHH
Q 024724 61 --------------------------------------------------------IGEMKKLVEEGKIKYIGLSEASPD 84 (263)
Q Consensus 61 --------------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~~~ 84 (263)
|++|++|+++||||+||||||+.+
T Consensus 116 K~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~ 195 (292)
T 4exb_A 116 KVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVE 195 (292)
T ss_dssp EESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTTSEEEEEEECSSHH
T ss_pred eeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCCCceEEEeCCCCHH
Confidence 899999999999999999999999
Q ss_pred HHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhh
Q 024724 85 TIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRN 164 (263)
Q Consensus 85 ~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
+++++++. ++++|++||++++.. .+++++|+++||++++|+||++|+|++
T Consensus 196 ~l~~~~~~--~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~--------------------------- 245 (292)
T 4exb_A 196 GGLRALRE--GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACL--------------------------- 245 (292)
T ss_dssp HHHHHHHH--SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC--------------------------------
T ss_pred HHHHHHHh--hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCC---------------------------
Confidence 99999887 899999999999976 689999999999999999999997632
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHH
Q 024724 165 KNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKE 223 (263)
Q Consensus 165 ~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e 223 (263)
++|+|++|+||+|++++|.+++||+|+++++||+||++++++.||+|
T Consensus 246 ------------~~g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 246 ------------GAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp ---------------CCHHHHHHHHHHHSTTCCEEEECCCCHHHHHHHHHHHHHHHC--
T ss_pred ------------CCCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHHhhccCCCC
Confidence 27899999999999999999999999999999999999999988875
No 37
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=2.1e-42 Score=305.92 Aligned_cols=202 Identities=22% Similarity=0.348 Sum_probs=172.9
Q ss_pred CCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--------------------
Q 024724 1 MVLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-------------------- 60 (263)
Q Consensus 1 ~~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-------------------- 60 (263)
.|++||.||||||++ +++++.++|+.|+++|||+||||+.|| ||+.+|+
T Consensus 21 tg~~vp~lGlGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~~~~~g~~R~~v~I 89 (334)
T 3krb_A 21 SMQYPPRLGFGTWQA--------PPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFKDASSGIKREDVWI 89 (334)
T ss_dssp CCSSCCSBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHCTTSSCCGGGCEE
T ss_pred CCCccCCeeeeCCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhhhccCCCChhhEEE
Confidence 378999999999975 788999999999999999999999999 7887762
Q ss_pred --------------------------------------------------------------------HHHHHHHHHcCC
Q 024724 61 --------------------------------------------------------------------IGEMKKLVEEGK 72 (263)
Q Consensus 61 --------------------------------------------------------------------~~~l~~l~~~Gk 72 (263)
|++|++|+++||
T Consensus 90 ~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~l~~~Gk 169 (334)
T 3krb_A 90 TSKLWNYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGL 169 (334)
T ss_dssp EEEECGGGCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHHTS
T ss_pred EeeeCCCCCCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHHHHHcCC
Confidence 258999999999
Q ss_pred cCEEEcCCCCHHHHHHHhcCC--CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCccc
Q 024724 73 IKYIGLSEASPDTIRRAHGVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSIL 150 (263)
Q Consensus 73 ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~ 150 (263)
||+||||||+.++++++++.. +++++|++||++.+ +.+++++|+++||++++|+||++|+|+++...... +
T Consensus 170 ir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~c~~~gI~v~ayspL~~G~L~~~~~~~~~-----~ 242 (334)
T 3krb_A 170 VKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHP--NDATVKFCLDNGIGVTAYSPMGGSYADPRDPSGTQ-----K 242 (334)
T ss_dssp EEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCCSBC-------CC-----B
T ss_pred ccEEEEecCCHHHHHHHHHhCCCceEEeeeecCcccc--cHHHHHHHHHcCCEEEEEecCCCCcccCCCCCCCc-----c
Confidence 999999999999999998765 67999999999988 57899999999999999999999999986321110 0
Q ss_pred ccCCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHH-----HHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHH
Q 024724 151 HFFPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLAL-----AWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDL 225 (263)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al-----~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~ 225 (263)
+. ....+.+.++|+++|+|++|+|| +|+++ + ++||+|+++++||++|+++++++||++++
T Consensus 243 ---~~---------~~~~~~l~~iA~~~g~s~aqvaLaw~~~~w~l~-~--~~vI~gs~~~~~l~en~~a~~~~Ls~ee~ 307 (334)
T 3krb_A 243 ---NV---------ILECKTLKAIADAKGTSPHCVALAWHVKKWNTS-M--YSVIPKSQTPARIEANFKCTEVQLSDDDM 307 (334)
T ss_dssp ---CG---------GGGCHHHHHHHHHHTSCHHHHHHHHHHHHSCST-T--EEECCBCSSHHHHHHHGGGGGCCCCHHHH
T ss_pred ---cc---------hhccHHHHHHHHHhCcCHHHhHHhhHhhhhhcC-C--eEEeeCCCCHHHHHHHHhhcCCCCCHHHH
Confidence 00 01126899999999999999999 88888 4 89999999999999999999999999999
Q ss_pred HHHHHhCCCC
Q 024724 226 KEISDAVPIE 235 (263)
Q Consensus 226 ~~i~~~~~~~ 235 (263)
++|+++.++.
T Consensus 308 ~~l~~l~~~~ 317 (334)
T 3krb_A 308 DAINNIHLNK 317 (334)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHhhcCC
Confidence 9999998654
No 38
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=4.9e-42 Score=302.33 Aligned_cols=204 Identities=27% Similarity=0.380 Sum_probs=173.4
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||++ +.+++.++|+.|+++||||||||+.|| +|+.+|+
T Consensus 13 g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~i~TK 81 (322)
T 1mi3_A 13 GHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGLVKREEIFLTSK 81 (322)
T ss_dssp SCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEE
T ss_pred CCEECCeeeeCCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCChhhEEEEEe
Confidence 78999999999874 788999999999999999999999999 6888875
Q ss_pred ---------------------------------H------------------------------------HHHHHHHHcC
Q 024724 61 ---------------------------------I------------------------------------GEMKKLVEEG 71 (263)
Q Consensus 61 ---------------------------------~------------------------------------~~l~~l~~~G 71 (263)
| ++|++|+++|
T Consensus 82 ~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l~~~G 161 (322)
T 1mi3_A 82 LWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAG 161 (322)
T ss_dssp ECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHHHHTT
T ss_pred eCCCCCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCCHHHHHHHHHHHHHcC
Confidence 2 3799999999
Q ss_pred CcCEEEcCCCCHHHHHHHhcCC--CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcc
Q 024724 72 KIKYIGLSEASPDTIRRAHGVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSI 149 (263)
Q Consensus 72 kir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~ 149 (263)
|||+||||||+.++++++++.. +++++|++||++.+ +.+++++|+++||++++|+||++|.+.... ....
T Consensus 162 kir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a~spL~~G~~~~~~------~~~~ 233 (322)
T 1mi3_A 162 KIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQ--QPKLIEFAQKAGVTITAYSSFGPQSFVEMN------QGRA 233 (322)
T ss_dssp SEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHHHHHHHHHTTCEEEEECTTTTHHHHTTT------CHHH
T ss_pred CcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcC--cHHHHHHHHHcCCEEEEECCCCCCCccccc------cccc
Confidence 9999999999999999998753 57899999999987 468999999999999999999999432110 0000
Q ss_pred cccCCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHH
Q 024724 150 LHFFPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEIS 229 (263)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~ 229 (263)
+ ..+.+. ..+.+.++|+++|+|++|+||+|+++++ ++||+|+++++||++|+++++++||++++++|+
T Consensus 234 ~-~~~~~~---------~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~ 301 (322)
T 1mi3_A 234 L-NTPTLF---------AHDTIKAIAAKYNKTPAEVLLRWAAQRG--IAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIA 301 (322)
T ss_dssp H-TSCCTT---------SCHHHHHHHHHHTCCHHHHHHHHHHTTT--CEECCCCCSHHHHHHTTSCCSSCCCHHHHHHHH
T ss_pred c-cCcccc---------cCHHHHHHHHHcCCCHHHHHHHHHHhCC--CEEEcCCCCHHHHHHHHhhcCCCcCHHHHHHHH
Confidence 0 001110 0158999999999999999999999998 699999999999999999999999999999999
Q ss_pred HhCCCCc
Q 024724 230 DAVPIEE 236 (263)
Q Consensus 230 ~~~~~~~ 236 (263)
++.++.+
T Consensus 302 ~~~~~~~ 308 (322)
T 1mi3_A 302 KLDIGLR 308 (322)
T ss_dssp TTCCCCC
T ss_pred hhcccCc
Confidence 9986543
No 39
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2.7e-42 Score=304.74 Aligned_cols=196 Identities=24% Similarity=0.336 Sum_probs=172.9
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh---------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--------------------- 60 (263)
|++||+||||||+ ++.++|+.|+++|||+||||+.|| ||+.+|+
T Consensus 33 g~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~~R~~v~I~TK 97 (331)
T 3h7r_A 33 GAKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGDGFVKREELFITSK 97 (331)
T ss_dssp SCEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSSCGGGCEEEEE
T ss_pred CCEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhcCCCCchhEEEEEe
Confidence 7899999999984 578999999999999999999999 8999885
Q ss_pred ----------------------------------------------------------HHHHHHHHHcCCcCEEEcCCCC
Q 024724 61 ----------------------------------------------------------IGEMKKLVEEGKIKYIGLSEAS 82 (263)
Q Consensus 61 ----------------------------------------------------------~~~l~~l~~~Gkir~iGvs~~~ 82 (263)
|++|++|+++||||+||||||+
T Consensus 98 ~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~ 177 (331)
T 3h7r_A 98 LWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFS 177 (331)
T ss_dssp ECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCC
T ss_pred eCCCCCCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHHHHHHHHHHHcCCCcEEEecCCC
Confidence 3799999999999999999999
Q ss_pred HHHHHHHhcCC--CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcc
Q 024724 83 PDTIRRAHGVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGEN 160 (263)
Q Consensus 83 ~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
.++++++++.. +++++|++||++.+ +.+++++|+++||++++|+||++|-.. ...
T Consensus 178 ~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gI~v~a~spL~~g~~~-------~~~-------------- 234 (331)
T 3h7r_A 178 SKKLTDLLNVARVTPAVNQVECHPVWQ--QQGLHELCKSKGVHLSGYSPLGSQSKG-------EVR-------------- 234 (331)
T ss_dssp HHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEEESTTSCSCTT-------TTT--------------
T ss_pred HHHHHHHHHhcCCCceeEEeecccccC--CHHHHHHHHHCCCEEEEeCCCCCCCCC-------CCc--------------
Confidence 99999988764 67899999999988 468999999999999999999976210 000
Q ss_pred hhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccCC
Q 024724 161 LDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVAG 239 (263)
Q Consensus 161 ~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~~ 239 (263)
......+.+.++|+++|+|++|+||+|+++++ ++||+|+++++||++|+++++++||++++++|+++.++..+.|
T Consensus 235 --~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~~~~ 309 (331)
T 3h7r_A 235 --LKVLQNPIVTEVAEKLGKTTAQVALRWGLQTG--HSVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQEKFCRA 309 (331)
T ss_dssp --HHHHTCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCCCSCHHHHHHHTCCSSCCCCHHHHGGGGGSCCCCSCCC
T ss_pred --cchhcCHHHHHHHHHHCcCHHHHHHHHHHHCC--CEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHHhhhcCcccC
Confidence 00111268999999999999999999999998 7999999999999999999999999999999999998876666
No 40
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=3.8e-41 Score=298.48 Aligned_cols=193 Identities=28% Similarity=0.442 Sum_probs=171.5
Q ss_pred CcccccceeccccCCCCCCCCCCHHHHHHHHHHHHH-cCCCeEeccCCcCCCchhHHHHh--------------------
Q 024724 2 VLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFS-KGITFFDTADVYGQNANETLLGK-------------------- 60 (263)
Q Consensus 2 ~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~-~Gi~~~DTA~~Yg~G~sE~~lG~-------------------- 60 (263)
|++||.||||||+. + +++.++|+.|++ +|||+||||+.|| +|+.+|+
T Consensus 45 g~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~g~~R~~v~I~TK 112 (344)
T 2bgs_A 45 GHAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEAGIDRKDLFVTSK 112 (344)
T ss_dssp SCEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHTTCCGGGCEEEEE
T ss_pred CCccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhcCCCcccEEEEec
Confidence 78999999999864 5 789999999999 9999999999999 7988876
Q ss_pred ---------------------------------H--------------------------HHHHHHHHcCCcCEEEcCCC
Q 024724 61 ---------------------------------I--------------------------GEMKKLVEEGKIKYIGLSEA 81 (263)
Q Consensus 61 ---------------------------------~--------------------------~~l~~l~~~Gkir~iGvs~~ 81 (263)
| ++|++|+++||||+||||||
T Consensus 113 ~~~~~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~aLe~l~~~GkIr~iGvSn~ 192 (344)
T 2bgs_A 113 IWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNY 192 (344)
T ss_dssp ECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecC
Confidence 1 28999999999999999999
Q ss_pred CHHHHHHHhcCC--CceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCc
Q 024724 82 SPDTIRRAHGVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGE 159 (263)
Q Consensus 82 ~~~~l~~~~~~~--~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
+.++++++++.. +++++|++||++.+ +.+++++|+++||++++|+||++| +. .. +.
T Consensus 193 ~~~~l~~~~~~~~i~p~v~Q~e~~~~~~--~~~ll~~~~~~gI~v~a~spL~~G---~~---~~------------~~-- 250 (344)
T 2bgs_A 193 TVTKLNRLLRSAKIPPAVCQMEMHPGWK--NDKIFEACKKHGIHITAYSPLGSS---EK---NL------------AH-- 250 (344)
T ss_dssp CHHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEEESTTCTT---TT---CC------------TT--
T ss_pred CHHHHHHHHHhcCCCceeeecccCcccC--cHHHHHHHHHCCCEEEEeCcccCC---Cc---hh------------hc--
Confidence 999999988753 47899999999987 468999999999999999999987 10 00 00
Q ss_pred chhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCccC
Q 024724 160 NLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEVA 238 (263)
Q Consensus 160 ~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~~ 238 (263)
.+.+.++|+++|+|++|+||+|+++++ ++||+|+++++||++|+++++++||++++++|+++.++.+.+
T Consensus 251 --------~~~l~~iA~~~g~s~aqvaL~w~l~~~--~~vI~gs~~~~~l~eNl~a~~~~Ls~ee~~~l~~l~~~~~~~ 319 (344)
T 2bgs_A 251 --------DPVVEKVANKLNKTPGQVLIKWALQRG--TSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVL 319 (344)
T ss_dssp --------CHHHHHHHHHHTCCHHHHHHHHHHHHT--CEECCBCSSHHHHHHTTCCSSCCCCHHHHHHHHHSCTTCCSC
T ss_pred --------cHHHHHHHHHhCCCHHHHHHHHHHhCC--CeEEECCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCCcc
Confidence 158899999999999999999999998 699999999999999999999999999999999998876554
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=96.92 E-value=0.00055 Score=66.40 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=74.9
Q ss_pred HHHHHHHHHcCCcCEEEc--CCCCH---H----------------HHHHHhcCCCceEEeccCCCcccchhhhhHHHHHH
Q 024724 61 IGEMKKLVEEGKIKYIGL--SEASP---D----------------TIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRE 119 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGv--s~~~~---~----------------~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~ 119 (263)
+++++++..+|+|+.+|+ |++.. . ...++++...+++++++||...+ ++++.|.+
T Consensus 259 Leaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~i~tGa~dv~vV~~n~i~~----~ll~~a~~ 334 (807)
T 3cf4_A 259 MDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKVIRSGMPDVIVVDEQCVRG----DIVPEAQK 334 (807)
T ss_dssp HHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHHHHHTCCSEEEECSSSCCT----THHHHHHH
T ss_pred HHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHHhhcCCCeEEEEEecCCCh----HHHHHHHH
Confidence 788888899999999954 43333 1 23344556788999999998653 67899999
Q ss_pred hCCceeecccCcC-cccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCcee
Q 024724 120 LGIGIVPYSPLGR-GFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVV 198 (263)
Q Consensus 120 ~gi~v~a~~~l~~-G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~ 198 (263)
+|+++++.+|.++ |++... + .+.+.+++|+++++...+
T Consensus 335 ~Gm~Vit~sp~~~~Grpd~~----------------------------------------d-~~~~~~le~LLs~~~~~~ 373 (807)
T 3cf4_A 335 LKIPVIASNPKIMYGLPNRT----------------------------------------D-ADVDETMEELKSGKIPGC 373 (807)
T ss_dssp TTCCEEECSTTCCTTCCBCT----------------------------------------T-SCHHHHHHHHHTTSSSEE
T ss_pred CCCEEEEechhhhcCCCccc----------------------------------------c-chHHHHHHHHHhCCCCCc
Confidence 9999999999876 432211 0 125778999999885455
Q ss_pred eccCCCcHHHH
Q 024724 199 PIPGTTKIKNL 209 (263)
Q Consensus 199 vi~g~~~~~~l 209 (263)
+++|+.++.++
T Consensus 374 l~~g~~~~~el 384 (807)
T 3cf4_A 374 VMLDYDKLGEL 384 (807)
T ss_dssp ECCCHHHHHHH
T ss_pred eeeCCccHHHH
Confidence 66777777664
No 42
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.92 E-value=14 Score=31.28 Aligned_cols=106 Identities=12% Similarity=0.061 Sum_probs=65.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh-HHHHHHHHH-cCCcCEEEcCCCCHHHHHHHhcC--CCceEEe
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-IGEMKKLVE-EGKIKYIGLSEASPDTIRRAHGV--HPITAVQ 99 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-~~~l~~l~~-~Gkir~iGvs~~~~~~l~~~~~~--~~~~~~q 99 (263)
+.+.+.+..+..++.|-.++|.--.+..-..|+.+.+ +..++.+++ .+. -|-|-++.++.++++++. ...-+|-
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~v--pisIDT~~~~V~eaaL~~~~Ga~iINd 112 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARV--PVMIDSSKWEVIEAGLKCLQGKSIVNS 112 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTS--CEEEECSCHHHHHHHHHHCSSCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCC--eEEEeCCCHHHHHHHHHhcCCCCEEEe
Confidence 5577777777778999999998654333233444443 333332222 122 477788999999999984 3322333
Q ss_pred ccCCCcccch-hhhhHHHHHHhCCceeecccCcCc
Q 024724 100 MEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 100 ~~~n~~~~~~-~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
.|.....+ -.++++.++++|..++.+.--..|
T Consensus 113 --Is~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G 145 (300)
T 3k13_A 113 --ISLKEGEEVFLEHARIIKQYGAATVVMAFDEKG 145 (300)
T ss_dssp --ECSTTCHHHHHHHHHHHHHHTCEEEEESEETTE
T ss_pred --CCcccCChhHHHHHHHHHHhCCeEEEEeeCCCC
Confidence 33332211 137999999999999986653334
No 43
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=81.78 E-value=4.9 Score=29.82 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=54.3
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCC----eEec------------cCCcCCCchhHHHHhHHHHHHHHHc
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGIT----FFDT------------ADVYGQNANETLLGKIGEMKKLVEE 70 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~----~~DT------------A~~Yg~G~sE~~lG~~~~l~~l~~~ 70 (263)
+|..||.++ -.+++.++..+-|+.+++.|.. |-|. -+++|..+...+|.++++..+....
T Consensus 2 ~~t~~tfSy----LP~ltd~qI~kQI~YlL~qGw~~~iEf~d~~~~r~~yW~mWkLPmFg~~d~~~Vl~Ele~C~k~~p~ 77 (138)
T 4f0h_B 2 RITQGTFSF----LPDLTDEQIKKQIDYMISKKLAIGIEYTNDIHPRNSFWEMWGLPLFEVTDPAPVLFEINACRKAKSN 77 (138)
T ss_dssp CCCCSTTTT----SCCCCHHHHHHHHHHHHHTTCEEEEEEESCCCTTCCCCEESSCCBCSCCSHHHHHHHHHHHHHHTTT
T ss_pred ccccccccc----CCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCCcCCEEeecCCCCcCCCCHHHHHHHHHHHHHHCCC
Confidence 456788875 5667999999999999999843 3332 2334445677888888888888888
Q ss_pred CCcCEEEcCCCC
Q 024724 71 GKIKYIGLSEAS 82 (263)
Q Consensus 71 Gkir~iGvs~~~ 82 (263)
..||-+|+.|..
T Consensus 78 ~YVRliGfDn~~ 89 (138)
T 4f0h_B 78 FYIKVVGFSSER 89 (138)
T ss_dssp SEEEEEEEECCT
T ss_pred CeEEEEEEeCCC
Confidence 999999998865
No 44
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=80.58 E-value=18 Score=30.58 Aligned_cols=133 Identities=11% Similarity=0.086 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHcCCCeEeccCCc-CCC----chhHHHHh-HHHHHHHHHc-CCcCEEEcCCCCHHHHHHHhcCCCceE
Q 024724 25 EEDGISMIKHAFSKGITFFDTADVY-GQN----ANETLLGK-IGEMKKLVEE-GKIKYIGLSEASPDTIRRAHGVHPITA 97 (263)
Q Consensus 25 ~~~~~~~l~~A~~~Gi~~~DTA~~Y-g~G----~sE~~lG~-~~~l~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~~ 97 (263)
.+.+.+..+..++.|...+|.-... .+| ..|+.+-+ ...++.++++ +. -|.|-+++++.++++++...--+
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~iI 139 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCCEE
Confidence 4556666666778999999975322 122 22444444 3455666554 43 47778899999999998744323
Q ss_pred EeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHH
Q 024724 98 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKK 177 (263)
Q Consensus 98 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 177 (263)
| ..|.... ..++++.++++|..++.+.. +|. |.| ....++..+.+.+.-+.|.+
T Consensus 140 N--dvsg~~~--d~~m~~~aa~~g~~vVlmh~--~G~-------------------p~y-~d~v~ev~~~l~~~i~~a~~ 193 (297)
T 1tx2_A 140 N--DIWGAKA--EPKIAEVAAHYDVPIILMHN--RDN-------------------MNY-RNLMADMIADLYDSIKIAKD 193 (297)
T ss_dssp E--ETTTTSS--CTHHHHHHHHHTCCEEEECC--CSC-------------------CCC-SSHHHHHHHHHHHHHHHHHH
T ss_pred E--ECCCCCC--CHHHHHHHHHhCCcEEEEeC--CCC-------------------CCc-chHHHHHHHHHHHHHHHHHH
Confidence 3 3333332 35789999999999998764 331 111 11223445555666667777
Q ss_pred cCCCHHHH
Q 024724 178 YKCTSAQL 185 (263)
Q Consensus 178 ~g~s~~q~ 185 (263)
.|+.+.++
T Consensus 194 ~GI~~~~I 201 (297)
T 1tx2_A 194 AGVRDENI 201 (297)
T ss_dssp TTCCGGGE
T ss_pred cCCChhcE
Confidence 77765443
No 45
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=78.24 E-value=6.1 Score=28.15 Aligned_cols=70 Identities=14% Similarity=0.290 Sum_probs=50.1
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHcCCC----eEecc------------CCcCCCchhHHHHhHHHHHHHHHcCC
Q 024724 9 GLGCMNLSSGYSSPVSEEDGISMIKHAFSKGIT----FFDTA------------DVYGQNANETLLGKIGEMKKLVEEGK 72 (263)
Q Consensus 9 glGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~----~~DTA------------~~Yg~G~sE~~lG~~~~l~~l~~~Gk 72 (263)
-|||.++ -.+++.++..+-|+.+++.|.. |-|.. +++|..+...+|.++++.........
T Consensus 10 ~~etfSy----LP~lt~eqI~kQI~Yll~qGw~p~lEf~d~~~~~~~yW~mwklPmf~~~d~~~Vl~Ele~C~k~~p~~y 85 (109)
T 1rbl_M 10 RFETFSY----LPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFACAAPQQVLDEVRECRSEYGDCY 85 (109)
T ss_dssp CCSTTTT----SSCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEECSSCCTTCCCHHHHHHHHHHHHHHCTTSE
T ss_pred ccccccc----CCCCCHHHHHHHHHHHHHCCCEEEEEeccCccccccEEeecccCCcCCCCHHHHHHHHHHHHHHCCCCe
Confidence 5777764 5667999999999999999853 33322 22333455677777777777777789
Q ss_pred cCEEEcCCCC
Q 024724 73 IKYIGLSEAS 82 (263)
Q Consensus 73 ir~iGvs~~~ 82 (263)
||-||+.|..
T Consensus 86 VRligfD~~~ 95 (109)
T 1rbl_M 86 IRVAGFDNIK 95 (109)
T ss_dssp EEEEEEETTT
T ss_pred EEEEEEeCCC
Confidence 9999998865
No 46
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=77.62 E-value=7.6 Score=27.67 Aligned_cols=70 Identities=14% Similarity=0.282 Sum_probs=50.1
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHcCCC----eEecc------------CCcCCCchhHHHHhHHHHHHHHHcCC
Q 024724 9 GLGCMNLSSGYSSPVSEEDGISMIKHAFSKGIT----FFDTA------------DVYGQNANETLLGKIGEMKKLVEEGK 72 (263)
Q Consensus 9 glGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~----~~DTA------------~~Yg~G~sE~~lG~~~~l~~l~~~Gk 72 (263)
-|||.++ -..++.++..+-|+.+++.|.. |-|.. +++|......+|.++++..+......
T Consensus 12 ~~etfSy----LP~lt~eqI~kQV~Yll~qGw~p~iEf~d~~~~~~~yW~mwklPmf~~~d~~~Vl~El~~C~k~~p~~y 87 (110)
T 1svd_M 12 KYETFSY----LPPMNAERIRAQIKYAIAQGWSPGIEHVEVKNSMNQYWYMWKLPFFGEQNVDNVLAEIEACRSAYPTHQ 87 (110)
T ss_dssp CCSTTTT----SCCCCHHHHHHHHHHHHHTTCEEEEEEECGGGTTCSCCEEESCCCTTCCCHHHHHHHHHHHHHHSTTSE
T ss_pred ccccccc----CCCCCHHHHHHHHHHHHHCCCeeEEEeccCCccCCcEEeecccCCcCCCCHHHHHHHHHHHHHHCCCCe
Confidence 4677664 5667999999999999999854 33322 23333455677777777777777789
Q ss_pred cCEEEcCCCC
Q 024724 73 IKYIGLSEAS 82 (263)
Q Consensus 73 ir~iGvs~~~ 82 (263)
||-||+.|..
T Consensus 88 VRligfD~~~ 97 (110)
T 1svd_M 88 VKLVAYDNYA 97 (110)
T ss_dssp EEEEEEETTT
T ss_pred EEEEEEeCCC
Confidence 9999998864
No 47
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=76.51 E-value=8.1 Score=28.69 Aligned_cols=72 Identities=17% Similarity=0.255 Sum_probs=52.0
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCC----eEec------------cCCcCCCchhHHHHhHHHHHHHHHc
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGIT----FFDT------------ADVYGQNANETLLGKIGEMKKLVEE 70 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~----~~DT------------A~~Yg~G~sE~~lG~~~~l~~l~~~ 70 (263)
+|-+||.++ -.+++.++..+-|+.+++.|.. |-|. -+++|..++..+|.++++..+....
T Consensus 2 ~~~~etfSy----LP~ltdeqI~kQI~Yll~qGw~p~iEf~d~~~~r~~yW~mWkLPmF~~td~~~Vl~Ele~C~k~~p~ 77 (138)
T 1bwv_S 2 RITQGTFSF----LPDLTDEQIKKQIDYMISKKLAIGIEYTNDIHPRNAYWEIWGLPLFDVTDPAAVLFEINACRKARSN 77 (138)
T ss_dssp CCCCSTTTT----SCCCCHHHHHHHHHHHHHTTCEEEEEEESCCCTTCCCCEECSSCBCSCCCHHHHHHHHHHHHHHCTT
T ss_pred ceecceecc----CCCCCHHHHHHHHHHHHHCCCeeeEEecCCCCCccCEEeccCCCCcCCCCHHHHHHHHHHHHHHCCC
Confidence 466888774 5667999999999999999843 3332 1233334566777777777777777
Q ss_pred CCcCEEEcCCCC
Q 024724 71 GKIKYIGLSEAS 82 (263)
Q Consensus 71 Gkir~iGvs~~~ 82 (263)
..||-||+.|..
T Consensus 78 ~YVRliGfD~~~ 89 (138)
T 1bwv_S 78 FYIKVVGFSSVR 89 (138)
T ss_dssp SEEEEEEEECCT
T ss_pred CeEEEEEEeCCC
Confidence 899999998865
No 48
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=76.21 E-value=28 Score=27.87 Aligned_cols=128 Identities=9% Similarity=0.128 Sum_probs=66.4
Q ss_pred CCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCc--hhHHHHhHHHHHHHHHcCCcCEEEc
Q 024724 1 MVLQVSKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNA--NETLLGKIGEMKKLVEEGKIKYIGL 78 (263)
Q Consensus 1 ~~~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~--sE~~lG~~~~l~~l~~~Gkir~iGv 78 (263)
|.++.-+||+-++.+. .....+.++.+-+.|++.++....+.... ++ ..++.+.++.++--++-.++
T Consensus 2 ~~m~~m~lg~~~~~~~--------~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~---~~~~~~~~~~~~~gl~~~~~ 70 (272)
T 2q02_A 2 MNIEKTRFCINRKIAP--------GLSIEAFFRLVKRLEFNKVELRNDMPSGSVTDD---LNYNQVRNLAEKYGLEIVTI 70 (272)
T ss_dssp CCCCGGGEEEEGGGCT--------TSCHHHHHHHHHHTTCCEEEEETTSTTSSTTTT---CCHHHHHHHHHHTTCEEEEE
T ss_pred CcceehhhhhcccccC--------CCCHHHHHHHHHHcCCCEEEeeccccccccccc---cCHHHHHHHHHHcCCeEEec
Confidence 3344446777777642 12356778888899999999764322100 11 11333333333222222222
Q ss_pred CCCCHHHHHHHhcCCCceEEeccCCCccc---chhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCC
Q 024724 79 SEASPDTIRRAHGVHPITAVQMEWSLWTR---DIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPR 155 (263)
Q Consensus 79 s~~~~~~l~~~~~~~~~~~~q~~~n~~~~---~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~ 155 (263)
... ..+|..+. ..-...++.|++.|...+...|-..+
T Consensus 71 ~~~------------------~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~---------------------- 110 (272)
T 2q02_A 71 NAV------------------YPFNQLTEEVVKKTEGLLRDAQGVGARALVLCPLNDG---------------------- 110 (272)
T ss_dssp EEE------------------TTTTSCCHHHHHHHHHHHHHHHHHTCSEEEECCCCSS----------------------
T ss_pred hhh------------------hccCCcHHHHHHHHHHHHHHHHHhCCCEEEEccCCCc----------------------
Confidence 110 01111111 11267899999999988775432111
Q ss_pred CCCcchhhh-HHHHHHHHHHHHHcCCC
Q 024724 156 YKGENLDRN-KNIYFRIENLAKKYKCT 181 (263)
Q Consensus 156 ~~~~~~~~~-~~~~~~l~~ia~~~g~s 181 (263)
....... .+.++.+.++|+++|+.
T Consensus 111 --~~~~~~~~~~~l~~l~~~a~~~gv~ 135 (272)
T 2q02_A 111 --TIVPPEVTVEAIKRLSDLFARYDIQ 135 (272)
T ss_dssp --BCCCHHHHHHHHHHHHHHHHTTTCE
T ss_pred --hhHHHHHHHHHHHHHHHHHHHcCCE
Confidence 0122455 67777888888888863
No 49
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=75.89 E-value=8 Score=28.74 Aligned_cols=72 Identities=10% Similarity=0.253 Sum_probs=51.3
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCC----eEec------------cCCcCCCchhHHHHhHHHHHHHHHc
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGIT----FFDT------------ADVYGQNANETLLGKIGEMKKLVEE 70 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~----~~DT------------A~~Yg~G~sE~~lG~~~~l~~l~~~ 70 (263)
+|-+||.++ -.+++.++..+-|+.+++.|.. |-|. -+++|..++..+|.++++..+....
T Consensus 2 ~~~~etfSy----LP~ltdeqI~kQI~YlL~qGw~p~lE~~d~~~~r~~yW~mWkLPmF~~td~~~Vl~Ele~C~k~~p~ 77 (139)
T 1bxn_I 2 RITQGTFSF----LPELTDEQITKQLEYCLNQGWAVGLEYTDDPHPRNTYWEMFGLPMFDLRDAAGILMEINNARNTFPN 77 (139)
T ss_dssp CCCCSBTTT----SSCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEESSSCBTTCCCHHHHHHHHHHHHHHCSS
T ss_pred ceecceecc----CCCCCHHHHHHHHHHHHHCCCeEEEEeccCCccccCEEeecCCCCcCCCCHHHHHHHHHHHHHHCCC
Confidence 466888774 5667999999999999999844 3332 1233334556777777777777777
Q ss_pred CCcCEEEcCCCC
Q 024724 71 GKIKYIGLSEAS 82 (263)
Q Consensus 71 Gkir~iGvs~~~ 82 (263)
..||-||+.|..
T Consensus 78 ~YVRliGfD~~~ 89 (139)
T 1bxn_I 78 HYIRVTAFDSTH 89 (139)
T ss_dssp SEEEEEEECTTT
T ss_pred CeEEEEEEeCCC
Confidence 899999998754
No 50
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=74.96 E-value=12 Score=30.00 Aligned_cols=87 Identities=13% Similarity=0.236 Sum_probs=58.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEcCCC-CHHHHHHHhcC-CCceEEecc
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHGV-HPITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs~~-~~~~l~~~~~~-~~~~~~q~~ 101 (263)
+.+++.++.+..++.|++.+...-. ++.- ++.++.++++=----||..+. +.++++.+.+. ..|-+.
T Consensus 23 ~~~~a~~~a~al~~gGi~~iEvt~~-----t~~a---~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs--- 91 (217)
T 3lab_A 23 DLVHAIPMAKALVAGGVHLLEVTLR-----TEAG---LAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS--- 91 (217)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEETT-----STTH---HHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC-----CccH---HHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe---
Confidence 7889999999999999999997522 2221 234444554411246777665 88888888776 444322
Q ss_pred CCCcccchhhhhHHHHHHhCC------ceee
Q 024724 102 WSLWTRDIEEEIIPLCRELGI------GIVP 126 (263)
Q Consensus 102 ~n~~~~~~~~~~~~~~~~~gi------~v~a 126 (263)
+....+++++|+++|+ .+++
T Consensus 92 -----P~~~~evi~~~~~~~v~~~~~~~~~P 117 (217)
T 3lab_A 92 -----PGLTPELIEKAKQVKLDGQWQGVFLP 117 (217)
T ss_dssp -----SSCCHHHHHHHHHHHHHCSCCCEEEE
T ss_pred -----CCCcHHHHHHHHHcCCCccCCCeEeC
Confidence 1224689999999999 6665
No 51
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=74.94 E-value=32 Score=28.57 Aligned_cols=127 Identities=13% Similarity=0.131 Sum_probs=69.1
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCC-------cCCCchhHHHHhHHHHHHHHHcCCcCEEEcC
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADV-------YGQNANETLLGKIGEMKKLVEEGKIKYIGLS 79 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~-------Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs 79 (263)
+||+-+|+|...+ .....+.++.+-+.|+..++.... |+ ..... ++
T Consensus 22 ~~g~~~~s~~~~~-----~~~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~--~~p~~--------------------~~ 74 (305)
T 3obe_A 22 KMGLQTYSLGQEL-----LQDMPNGLNRLAKAGYTDLEIFGYREDTGKFGD--YNPKN--------------------TT 74 (305)
T ss_dssp CCEEEGGGGTHHH-----HTTHHHHHHHHHHHTCCEEEECCBCTTTCCBCC--C------------------------CC
T ss_pred ceEEEEEEchhhh-----hcCHHHHHHHHHHcCCCEEEecccccccccccC--cCccc--------------------cc
Confidence 5788888773110 125778999999999999998743 11 11110 11
Q ss_pred CCCHHHHHHHhcCCCceEEeccCCC----cccc-------hhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCc
Q 024724 80 EASPDTIRRAHGVHPITAVQMEWSL----WTRD-------IEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADS 148 (263)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~q~~~n~----~~~~-------~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~ 148 (263)
..+...++++++...+.+.-+.+.. +++. .-...++.|++.|+..+.. | |. ..
T Consensus 75 ~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~-~---~~--~~---------- 138 (305)
T 3obe_A 75 FIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQ-P---SL--PR---------- 138 (305)
T ss_dssp CBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEE-C---CC--CC----------
T ss_pred ccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEe-C---CC--CC----------
Confidence 1233444444443333322221111 1111 1267899999999988874 2 11 00
Q ss_pred ccccCCCCCCcchhhhHHHHHHHHHHHHHcCCCH
Q 024724 149 ILHFFPRYKGENLDRNKNIYFRIENLAKKYKCTS 182 (263)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~ 182 (263)
.......+...+.++.+.++|+++|+++
T Consensus 139 ------~~~~~~~~~~~~~l~~l~~~a~~~Gv~l 166 (305)
T 3obe_A 139 ------IENEDDAKVVSEIFNRAGEITKKAGILW 166 (305)
T ss_dssp ------CSSHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 0011233556677788888889988753
No 52
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=73.83 E-value=15 Score=30.62 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=27.0
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccC
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTAD 47 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~ 47 (263)
+||+-+|++...+. .....+.++.+-++|++.++...
T Consensus 14 ~~g~~~~s~~~~~~----~~~~~~~l~~~a~~G~~~VEl~~ 50 (303)
T 3l23_A 14 EIGLQIYSLSQELY----KGDVAANLRKVKDMGYSKLELAG 50 (303)
T ss_dssp CCEEEGGGGGGGGG----SSCHHHHHHHHHHTTCCEEEECC
T ss_pred ceEEEEEEchhhhc----cCCHHHHHHHHHHcCCCEEEecc
Confidence 67888888743111 01477899999999999999864
No 53
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=69.42 E-value=43 Score=27.72 Aligned_cols=98 Identities=13% Similarity=0.064 Sum_probs=61.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh-HHHHHHHHHc-CCcCEEEcCCCCHHHHHHHhcC--CCceEEe
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-IGEMKKLVEE-GKIKYIGLSEASPDTIRRAHGV--HPITAVQ 99 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-~~~l~~l~~~-Gkir~iGvs~~~~~~l~~~~~~--~~~~~~q 99 (263)
+.+.+.+..+..++.|-.++|.--... .|+-+-+ ...++.+++. +. -+.|-+++++.++++++. ...-+|-
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~---~~eE~~rv~~vi~~l~~~~~~--pisIDT~~~~v~~aal~a~~Ga~iINd 106 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPT---ADDPVRVMEWLVKTIQEVVDL--PCCLDSTNPDAIEAGLKVHRGHAMINS 106 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSC---SSCHHHHHHHHHHHHHHHCCC--CEEEECSCHHHHHHHHHHCCSCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcC---chhHHHHHHHHHHHHHHhCCC--eEEEeCCCHHHHHHHHHhCCCCCEEEE
Confidence 446677777777899999999764443 1212222 2344445543 32 367788899999999887 3322332
Q ss_pred ccCCCcccchhhhhHHHHHHhCCceeeccc
Q 024724 100 MEWSLWTRDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 100 ~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
+ |... .--.++++.++++|..++.+..
T Consensus 107 v--s~~~-d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 107 T--SADQ-WKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp E--CSCH-HHHHHHHHHHHHHTCEEEEESC
T ss_pred C--CCCc-cccHHHHHHHHHcCCCEEEEec
Confidence 2 2221 1015799999999999998765
No 54
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=68.95 E-value=16 Score=26.77 Aligned_cols=70 Identities=17% Similarity=0.296 Sum_probs=47.6
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHcCCC----eEeccC-----------------------CcCCCchhHHHHhH
Q 024724 9 GLGCMNLSSGYSSPVSEEDGISMIKHAFSKGIT----FFDTAD-----------------------VYGQNANETLLGKI 61 (263)
Q Consensus 9 glGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~----~~DTA~-----------------------~Yg~G~sE~~lG~~ 61 (263)
=|||.++ -..++.++..+-|+.+++.|.. |-|... ++|.-++..+|.++
T Consensus 11 ~~~tfSy----LP~lt~eqI~kQI~Yll~qGw~p~lEf~d~~~~~R~~~~~~~~~~~~yW~mWkLPmFg~td~~~Vl~El 86 (128)
T 1wdd_S 11 KFETLSY----LPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKEL 86 (128)
T ss_dssp CCSTTTT----SSCCCHHHHHHHHHHHHHTTCEEEEEEESCCSCBCSSCCSTTCCBSCCCEEESCCCTTCCCHHHHHHHH
T ss_pred ccccccc----CCCCCHHHHHHHHHHHHHCCCeeeEEecCCCceeeccCCCCCcccCCcccccCccCccCCCHHHHHHHH
Confidence 3677764 5667999999999999999843 334331 22223345566666
Q ss_pred HHHHHHHHcCCcCEEEcCCCC
Q 024724 62 GEMKKLVEEGKIKYIGLSEAS 82 (263)
Q Consensus 62 ~~l~~l~~~Gkir~iGvs~~~ 82 (263)
++..+......||-||+.|..
T Consensus 87 ~~C~k~~P~~YVRligfDn~~ 107 (128)
T 1wdd_S 87 EEAKKAYPDAFVRIIGFDNVR 107 (128)
T ss_dssp HHHHHHCTTSEEEEEEEETTT
T ss_pred HHHHHHCCCCeEEEEEEeCCC
Confidence 666666677889999998754
No 55
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=68.38 E-value=55 Score=27.79 Aligned_cols=99 Identities=8% Similarity=0.121 Sum_probs=65.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccC-CcCCCch--------hHHHHh-HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTAD-VYGQNAN--------ETLLGK-IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH 93 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~-~Yg~G~s--------E~~lG~-~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~ 93 (263)
+.+.+.+..+..++.|...+|... +-.+|.. |+.+.+ ...++.+++.-. --|.|-++.++.++++++..
T Consensus 47 ~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~-vpISIDT~~~~Va~aAl~aG 125 (314)
T 3tr9_A 47 DLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFP-QLISVDTSRPRVMREAVNTG 125 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCC-SEEEEECSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCC-CeEEEeCCCHHHHHHHHHcC
Confidence 567777777788899999999753 2223322 333333 345666665421 35888899999999999874
Q ss_pred CceEEeccCCCcccchhhhhHHHHHHhCCceeecc
Q 024724 94 PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 94 ~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
.--+|- .|-.. ..++++.+.++|+.++.+.
T Consensus 126 a~iIND--Vsg~~---~~~m~~v~a~~g~~vVlMh 155 (314)
T 3tr9_A 126 ADMIND--QRALQ---LDDALTTVSALKTPVCLMH 155 (314)
T ss_dssp CCEEEE--TTTTC---STTHHHHHHHHTCCEEEEC
T ss_pred CCEEEE--CCCCC---chHHHHHHHHhCCeEEEEC
Confidence 322332 23322 2479999999999999765
No 56
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=66.81 E-value=29 Score=26.88 Aligned_cols=88 Identities=22% Similarity=0.269 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHc-CCcCEEEcCC-CCHHHHHHHhcCCCceEEecc
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEE-GKIKYIGLSE-ASPDTIRRAHGVHPITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~-Gkir~iGvs~-~~~~~l~~~~~~~~~~~~q~~ 101 (263)
+.+++.++++.+.+.|+..+.....-. ... +.++++++. ++-..+|+++ .+.++++.+.+ ...|++ +.
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~--~~~------~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~-~Gad~i-v~ 89 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVP--DAD------TVIKELSFLKEKGAIIGAGTVTSVEQCRKAVE-SGAEFI-VS 89 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTST--THH------HHHHHTHHHHHTTCEEEEESCCSHHHHHHHHH-HTCSEE-EC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCh--hHH------HHHHHHHHHCCCCcEEEecccCCHHHHHHHHH-cCCCEE-Ec
Confidence 778999999999999999996532211 122 233444433 3224578744 68888877765 334555 22
Q ss_pred CCCcccchhhhhHHHHHHhCCceee
Q 024724 102 WSLWTRDIEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 102 ~n~~~~~~~~~~~~~~~~~gi~v~a 126 (263)
+.. ..++++.|+++|+.+++
T Consensus 90 --~~~---~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 90 --PHL---DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp --SSC---CHHHHHHHHHHTCEEEC
T ss_pred --CCC---CHHHHHHHHHcCCcEEC
Confidence 211 25699999999999886
No 57
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=65.64 E-value=35 Score=29.45 Aligned_cols=98 Identities=6% Similarity=-0.014 Sum_probs=70.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+ +|+-. + . .++.+.++++.-.|-=++- +-++.+.++++++....+++|+..
T Consensus 201 ~~~~a~~~~~~l~~~~i-~iE~P--~----~-----~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~ 268 (379)
T 2rdx_A 201 RVDNAIRLARATRDLDY-ILEQP--C----R-----SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKI 268 (379)
T ss_dssp CHHHHHHHHHHTTTSCC-EEECC--S----S-----SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEET
T ss_pred CHHHHHHHHHHHHhCCe-EEeCC--c----C-----CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 67888888877667899 88632 1 1 5777888887755554443 345888999999888899999977
Q ss_pred CCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 103 SLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 103 n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
+-.-- ..-.++...|+++|+.++..+.+.++
T Consensus 269 ~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 300 (379)
T 2rdx_A 269 SNLGGLSKARRTRDFLIDNRMPVVAEDSWGGE 300 (379)
T ss_dssp TTTTSHHHHHHHHHHHHHTTCCEEEECSBCSH
T ss_pred cccCCHHHHHHHHHHHHHcCCeEEEeeccCcH
Confidence 75422 22368899999999999887544433
No 58
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=65.23 E-value=12 Score=31.68 Aligned_cols=44 Identities=14% Similarity=0.170 Sum_probs=33.0
Q ss_pred ccccceeccccCCCCCCCCC-----CHHHHHHHHHHHHHc-CCCeEeccC
Q 024724 4 QVSKLGLGCMNLSSGYSSPV-----SEEDGISMIKHAFSK-GITFFDTAD 47 (263)
Q Consensus 4 ~vs~lglGt~~~g~~~~~~~-----~~~~~~~~l~~A~~~-Gi~~~DTA~ 47 (263)
+-+++|+|+|.|+..+++-. ++....+.++.+-+. |++.++...
T Consensus 6 ~~~~~~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~~G~~~VEl~~ 55 (333)
T 3ktc_A 6 NYPEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPY 55 (333)
T ss_dssp CCCCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCCcceeeeeeeecccccccCCCCCCCCCHHHHHHHHHHhCCCCEEEecC
Confidence 34789999999997555421 233467889999999 999999863
No 59
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=64.90 E-value=37 Score=27.46 Aligned_cols=85 Identities=20% Similarity=0.269 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHc--CCcCEEEcCC-CCHHHHHHHhcC-CCceEEe
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEE--GKIKYIGLSE-ASPDTIRRAHGV-HPITAVQ 99 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~--Gkir~iGvs~-~~~~~l~~~~~~-~~~~~~q 99 (263)
+.+++.++.+.+++.|++.+.....-. .. .+.+++++++ +. -+|..+ .+.++++.+++. ..|.+
T Consensus 44 ~~~~a~~~a~al~~gGi~~iEvt~~t~--~a------~e~I~~l~~~~~~~--~iGaGTVlt~~~a~~Ai~AGA~fIv-- 111 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLPAAEITFRSD--AA------VEAIRLLRQAQPEM--LIGAGTILNGEQALAAKEAGATFVV-- 111 (232)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTST--TH------HHHHHHHHHHCTTC--EEEEECCCSHHHHHHHHHHTCSEEE--
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCC--CH------HHHHHHHHHhCCCC--EEeECCcCCHHHHHHHHHcCCCEEE--
Confidence 678899999999999999999642211 12 2334444443 33 445443 478888888775 34422
Q ss_pred ccCCCcccchhhhhHHHHHHhCCceee
Q 024724 100 MEWSLWTRDIEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 100 ~~~n~~~~~~~~~~~~~~~~~gi~v~a 126 (263)
. + ....+++++|+++|+.+++
T Consensus 112 s---P---~~~~~vi~~~~~~gi~~ip 132 (232)
T 4e38_A 112 S---P---GFNPNTVRACQEIGIDIVP 132 (232)
T ss_dssp C---S---SCCHHHHHHHHHHTCEEEC
T ss_pred e---C---CCCHHHHHHHHHcCCCEEc
Confidence 1 1 1246899999999998876
No 60
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=64.70 E-value=60 Score=26.91 Aligned_cols=99 Identities=10% Similarity=0.084 Sum_probs=65.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccC-CcCCC----chhHHHHh-HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceE
Q 024724 24 SEEDGISMIKHAFSKGITFFDTAD-VYGQN----ANETLLGK-IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITA 97 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~-~Yg~G----~sE~~lG~-~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~ 97 (263)
+.+.+.+-.+..++.|...+|-.. +-.+| ..|+.+.+ ...++.+++.+. -|-|-++.++.++++++..---+
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v--~iSIDT~~~~Va~~al~aGa~iI 105 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDV--KISVDTFRSEVAEACLKLGVDMI 105 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSS--EEEEECSCHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCC--eEEEECCCHHHHHHHHHhcccee
Confidence 456666667777889999999842 22222 23444554 556666665443 57888999999999988643223
Q ss_pred EeccCCCcccchhhhhHHHHHHhCCceeecc
Q 024724 98 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 98 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
|-+ +-... +.++++.+.++++.++.+.
T Consensus 106 NDV--s~g~~--d~~m~~~va~~~~~~vlMH 132 (270)
T 4hb7_A 106 NDQ--WAGLY--DHRMFQIVAKYDAEIILMH 132 (270)
T ss_dssp EET--TTTSS--CTHHHHHHHHTTCEEEEEC
T ss_pred ccc--ccccc--chhHHHHHHHcCCCeEEec
Confidence 332 21222 3579999999999999876
No 61
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=64.33 E-value=62 Score=26.94 Aligned_cols=140 Identities=14% Similarity=0.215 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccC-CcCCC----chhHHHHh-HHHHHHHHHc-CCcCEEEcCCCCHHHHHHHhcCCCce
Q 024724 24 SEEDGISMIKHAFSKGITFFDTAD-VYGQN----ANETLLGK-IGEMKKLVEE-GKIKYIGLSEASPDTIRRAHGVHPIT 96 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~-~Yg~G----~sE~~lG~-~~~l~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~ 96 (263)
+.+.+.+..+..++.|...+|... +-.+| ..|+.+-+ ...++.++++ +. -|.+-+++++.++++++....-
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aGa~i 113 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVGAHI 113 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcCCCE
Confidence 456677777777889999999865 22244 12344444 3555556554 33 5788899999999999885433
Q ss_pred EEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHH
Q 024724 97 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAK 176 (263)
Q Consensus 97 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~ 176 (263)
+|-+. -. . ..++++.++++|+.++.+.. +|.- ...+. .+.|. .-..+..+.+....+.|.
T Consensus 114 INdvs--g~-~--d~~~~~~~a~~~~~vVlmh~--~G~p---~tm~~---------~~~y~-d~~~ev~~~l~~~i~~a~ 173 (282)
T 1aj0_A 114 INDIR--SL-S--EPGALEAAAETGLPVCLMHM--QGNP---KTMQE---------APKYD-DVFAEVNRYFIEQIARCE 173 (282)
T ss_dssp EEETT--TT-C--STTHHHHHHHHTCCEEEECC--SSCT---TCCSC---------CCCCS-CHHHHHHHHHHHHHHHHH
T ss_pred EEECC--CC-C--CHHHHHHHHHhCCeEEEEcc--CCCC---ccccc---------cCccc-hHHHHHHHHHHHHHHHHH
Confidence 44433 22 2 35799999999999998754 3321 00011 12231 223344555666667777
Q ss_pred HcCCCHHHH
Q 024724 177 KYKCTSAQL 185 (263)
Q Consensus 177 ~~g~s~~q~ 185 (263)
+.|+.+.++
T Consensus 174 ~~Gi~~~~I 182 (282)
T 1aj0_A 174 QAGIAKEKL 182 (282)
T ss_dssp HTTCCGGGE
T ss_pred HcCCChhhE
Confidence 778765443
No 62
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=64.08 E-value=38 Score=29.22 Aligned_cols=73 Identities=12% Similarity=0.047 Sum_probs=50.9
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+++++-.|- ..|=+-++...++++++...++++|+..+-.-- ..-.++...|+++|+.++..+.+.++
T Consensus 224 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 224 YTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp GGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCccccH
Confidence 56677777654443 333355788888888888888999987665421 12368999999999999886665443
No 63
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=63.52 E-value=18 Score=26.01 Aligned_cols=69 Identities=13% Similarity=0.284 Sum_probs=46.1
Q ss_pred eccccCCCCCCCCCCHHHHHHHHHHHHHcCCC----e-----Eecc-------CCcCCCchhHHHHhHHHHHHHHHcCCc
Q 024724 10 LGCMNLSSGYSSPVSEEDGISMIKHAFSKGIT----F-----FDTA-------DVYGQNANETLLGKIGEMKKLVEEGKI 73 (263)
Q Consensus 10 lGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~----~-----~DTA-------~~Yg~G~sE~~lG~~~~l~~l~~~Gki 73 (263)
|.|.+ |-.+++.++..+-|+..++.|.+ | +++. +++|..+.-.+|.++++..+......|
T Consensus 10 feTfS----yLP~Lt~eqI~kQV~yll~qGw~~~lE~~d~~~~~~~yW~mWklPmf~~~d~~~Vl~Ele~C~k~~p~~yV 85 (118)
T 3zxw_B 10 YETFS----YLPPLSDAQIARQIQYAIDQGYHPCVEFNETSNAEIRYWTMWKLPLFNCTNAQDVLNEVQQCRSEYPNCFI 85 (118)
T ss_dssp ----C----CSCCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEEESSCCTTCCCHHHHHHHHHHHHHHCTTSEE
T ss_pred ccccc----cCCCCCHHHHHHHHHHHHhCCCeeEEEeccCCCcccCEEeecccCCcCCCCHHHHHHHHHHHHHHCCCceE
Confidence 55655 45667899999999999999854 2 2332 223334455677777777777777899
Q ss_pred CEEEcCCCC
Q 024724 74 KYIGLSEAS 82 (263)
Q Consensus 74 r~iGvs~~~ 82 (263)
|-||+-|..
T Consensus 86 RliGfD~~~ 94 (118)
T 3zxw_B 86 RVVAFDNIK 94 (118)
T ss_dssp EEEEEETTT
T ss_pred EEEEEeCCc
Confidence 999998764
No 64
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=63.50 E-value=44 Score=28.72 Aligned_cols=73 Identities=15% Similarity=0.139 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCcCE-EEcCCCCHHHHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIKY-IGLSEASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+++++-.+.= .|=+-++...++++++...++++|+..+-.--..-.++...|+++|+.++..+.+.++
T Consensus 225 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~Git~~~~ia~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 225 VLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTARTGFTGSTRVHHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp HHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHHTTHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhhhHHHHHHHHHHHHHcCCeEEECCcCCcH
Confidence 677888887655543 3445568888888888888888988655431112267899999999999876655544
No 65
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=63.05 E-value=34 Score=30.04 Aligned_cols=74 Identities=14% Similarity=0.109 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 134 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~ 134 (263)
++.+.+|+++-.+. +.|=|-++...+.++++..-++++|+...----..-.++...|+.+|+.++..+++..|+
T Consensus 272 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~GGit~~~kia~~A~~~gi~v~~h~~~~~~i 346 (412)
T 4h1z_A 272 IDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQPEMGHKGITQFMRIGAYAHVHHIKVIPHATIGAGI 346 (412)
T ss_dssp HHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHHHHHHHHHHHHHHHTTCEECCCCCSSCSH
T ss_pred hHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEecCCCCChHHHHHHHHHHHHCCCcEEecCCcchHH
Confidence 78888888765442 445567788899998888888899887431000012678889999999998887776553
No 66
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=62.87 E-value=29 Score=29.69 Aligned_cols=96 Identities=8% Similarity=0.007 Sum_probs=66.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-. +. . ..++.+.++++.-.|-=++- +-++.+.++++++....+++|+.-
T Consensus 201 ~~~~a~~~~~~l~~~~i~~iE~P--~~---~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~ 271 (359)
T 1mdl_A 201 DVPAAIKRSQALQQEGVTWIEEP--TL---Q----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDA 271 (359)
T ss_dssp CHHHHHHHHHHHHHHTCSCEECC--SC---T----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred CHHHHHHHHHHHHHhCCCeEECC--CC---h----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecc
Confidence 55666666666556677777532 11 1 12777888888766654443 345888999999988899999977
Q ss_pred CCccc-chhhhhHHHHHHhCCceeecc
Q 024724 103 SLWTR-DIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 103 n~~~~-~~~~~~~~~~~~~gi~v~a~~ 128 (263)
+-+-- ..-.++...|+++|+.++..+
T Consensus 272 ~~~GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 272 MKIGGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp TTTTHHHHHHHHHHHHHHTTCCBCCBS
T ss_pred hhhCCHHHHHHHHHHHHHcCCeEeecc
Confidence 65422 223688999999999987753
No 67
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=62.79 E-value=63 Score=26.50 Aligned_cols=101 Identities=11% Similarity=0.046 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC-CceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH-PITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~-~~~~~q~~~ 102 (263)
+.+.+.+..+..++.|-..+|.---...-..++.+.+ +-..+++-.=.-|.|-+++++.++++++.. ..+++ ...
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~r---vv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iI-Ndv 98 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEW---LVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMI-NST 98 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHH---HHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEE-EEE
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHH---HHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEE-EEC
Confidence 5667777777778899999998652221123333332 222222211124677889999999998862 22221 222
Q ss_pred CCcccchhhhhHHHHHHhCCceeeccc
Q 024724 103 SLWTRDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 103 n~~~~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
|.. .....++++.++++|..++.+..
T Consensus 99 s~~-~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 99 NAE-REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp CSC-HHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCC-cccHHHHHHHHHHhCCcEEEEcC
Confidence 332 22124899999999999998764
No 68
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=62.72 E-value=15 Score=27.21 Aligned_cols=70 Identities=11% Similarity=0.223 Sum_probs=47.7
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHcCCC----eEeccCCcC------------------------------CCch
Q 024724 9 GLGCMNLSSGYSSPVSEEDGISMIKHAFSKGIT----FFDTADVYG------------------------------QNAN 54 (263)
Q Consensus 9 glGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~----~~DTA~~Yg------------------------------~G~s 54 (263)
=|||.++ -..++.++..+-|+.+++.|.. |-|....|. .-++
T Consensus 11 ~~etfSy----LP~lt~eqI~kQI~YlL~qGw~p~lEf~d~~~~~r~~~~~~~~~~~~~~yyd~~YW~mWkLPmFg~td~ 86 (140)
T 1gk8_I 11 MFETFSY----LPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDP 86 (140)
T ss_dssp CCSTTTT----SSCCCHHHHHHHHHHHHHTTCEEEEEEECGGGTSCBCGGGGGCSSCCTTCCBTSSCEEESCCCTTCCCH
T ss_pred eeccccc----CCCCCHHHHHHHHHHHHHCCCEeeEEeccCCcceecccccccccccCCCcCcCCeeeeCCcCCcCCCCH
Confidence 3677664 5667899999999999999843 445444331 1234
Q ss_pred hHHHHhHHHHHHHHHcCCcCEEEcCCCC
Q 024724 55 ETLLGKIGEMKKLVEEGKIKYIGLSEAS 82 (263)
Q Consensus 55 E~~lG~~~~l~~l~~~Gkir~iGvs~~~ 82 (263)
..+|.++++..+......||-||+.|..
T Consensus 87 ~qVl~El~~C~k~~P~~YVRligfDn~~ 114 (140)
T 1gk8_I 87 MQVLREIVACTKAFPDAYVRLVAFDNQK 114 (140)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEEETTT
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEEeCCC
Confidence 4556656666666667889999998754
No 69
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=62.37 E-value=76 Score=27.42 Aligned_cols=101 Identities=7% Similarity=0.130 Sum_probs=68.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-.- . .+ .++.+.+++++-.|. ..|=+-++...++++++...++++|+..
T Consensus 206 ~~~~A~~~~~~l~~~~i~~iEqP~--~---~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 206 DRRTALHYLPILAEAGVELFEQPT--P---AD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp CHHHHHHHHHHHHHTTCCEEESCS--C---TT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECT
T ss_pred CHHHHHHHHHHHHhcCCCEEECCC--C---hh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcc
Confidence 567777777766677888887321 1 11 256677777653332 3344557889999999888889999987
Q ss_pred CCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 103 SLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 103 n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
+-+-- ..-.++...|+++|+.++..+.+.++
T Consensus 277 ~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 277 TKHGGLLESKKIAAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp TTTTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred cccCCHHHHHHHHHHHHHcCCeEEeCCCCccH
Confidence 65421 22367889999999999876655544
No 70
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=62.26 E-value=25 Score=29.29 Aligned_cols=100 Identities=15% Similarity=0.155 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHH----HhHHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceEE
Q 024724 23 VSEEDGISMIKHAFSKGITFFDTADVYGQNANETLL----GKIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAV 98 (263)
Q Consensus 23 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~l----G~~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~ 98 (263)
++.++..++++.+-+.|+..++....-. ++ .+ ..++.++.+.+...++...+. .+...++++++. .++.+
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~---~~-~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~-G~~~V 96 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVS---PK-WVPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAA-HADEI 96 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSC---TT-TCGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHT-TCSEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcC---cc-ccccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHC-CCCEE
Confidence 5789999999999999999999863211 22 22 235666666655456665655 567778877775 34455
Q ss_pred eccCCCc--------ccchh------hhhHHHHHHhCCceeecc
Q 024724 99 QMEWSLW--------TRDIE------EEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 99 q~~~n~~--------~~~~~------~~~~~~~~~~gi~v~a~~ 128 (263)
.+....- ....+ .+.+++|+++|+.+.++-
T Consensus 97 ~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l 140 (295)
T 1ydn_A 97 AVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYV 140 (295)
T ss_dssp EEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 5532111 11111 567899999999987543
No 71
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=62.17 E-value=15 Score=32.01 Aligned_cols=101 Identities=18% Similarity=0.126 Sum_probs=68.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-. +. . ..++.+.+++++-.|-=++- +-++.+.++++++....+++|+.-
T Consensus 220 ~~~~a~~~~~~l~~~~i~~iEqP--~~---~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 290 (388)
T 2nql_A 220 TPERALELIAEMQPFDPWFAEAP--VW---T----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEM 290 (388)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECC--SC---T----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCH
T ss_pred CHHHHHHHHHHHhhcCCCEEECC--CC---h----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecC
Confidence 56777777776556788777632 11 1 12677888887765554444 335889999999988899999865
Q ss_pred CCcccchhhhhHHHHHHhCCceeecccCcCc
Q 024724 103 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 103 n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
+--.-..-.++...|+++|+.++..+.+.++
T Consensus 291 ~~GGit~~~~i~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 291 GHKGITNFIRIGALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp HHHCHHHHHHHHHHHHHHTCEECCCCCSSCS
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEeecCCCcH
Confidence 5411111267889999999998886554443
No 72
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=60.98 E-value=34 Score=29.65 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=69.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEcC-CCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-. +. . ..++.+.++++.-.|-=++-- -++.+.++++++....+++|+.-
T Consensus 202 ~~~~a~~~~~~l~~~~i~~iEqP--~~---~----~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~ 272 (384)
T 2pgw_A 202 SVHDAINMCRKLEKYDIEFIEQP--TV---S----WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGP 272 (384)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECC--SC---T----TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHHHHhcCCCEEeCC--CC---h----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcc
Confidence 66778888776667788888732 22 1 126677888876555544443 35888999999988899999865
Q ss_pred CCcc-cchhhhhHHHHHHhCCceeecccCcC
Q 024724 103 SLWT-RDIEEEIIPLCRELGIGIVPYSPLGR 132 (263)
Q Consensus 103 n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~ 132 (263)
+-+- ...-.++...|+++|+.++..+.+..
T Consensus 273 ~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 303 (384)
T 2pgw_A 273 REIGGIQPMMKAAAVAEAAGLKICIHSSFTT 303 (384)
T ss_dssp HHHTSHHHHHHHHHHHHHTTCCEEECCCSCC
T ss_pred hhhCCHHHHHHHHHHHHHCCCeEeeccCcCC
Confidence 5432 12236789999999999988764443
No 73
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=60.95 E-value=23 Score=28.83 Aligned_cols=28 Identities=18% Similarity=0.476 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQ 51 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~ 51 (263)
++++..++.+.|.++|..|+.|+.-|+.
T Consensus 155 t~eei~~a~~ia~~aGADfVKTSTGf~~ 182 (239)
T 3ngj_A 155 TNEEKVEVCKRCVAAGAEYVKTSTGFGT 182 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHHCcCEEECCCCCCC
Confidence 7788999999999999999999987764
No 74
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=59.71 E-value=75 Score=26.38 Aligned_cols=101 Identities=16% Similarity=0.107 Sum_probs=66.7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeccCCcC-CCc----hhHHHHh-HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCce
Q 024724 23 VSEEDGISMIKHAFSKGITFFDTADVYG-QNA----NETLLGK-IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPIT 96 (263)
Q Consensus 23 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg-~G~----sE~~lG~-~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~ 96 (263)
.+.+.+.+..+..++.|-.++|...... +|. .|+.+-+ ...++.+++.+. -|.|-+++++.++++++....-
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa~i 103 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGAQM 103 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCCCE
Confidence 3678888888888999999999864221 221 1222333 556666766543 4788899999999999885433
Q ss_pred EEeccCCCcccchhhhhHHHHHHhCCceeeccc
Q 024724 97 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 97 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
+|-+ |-... ..++++.++++|..++.+..
T Consensus 104 INdv--sg~~~--d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 104 VNDV--SGGRA--DPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp EEET--TTTSS--CTTHHHHHHHHTCCEEEECC
T ss_pred EEEC--CCCCC--CHHHHHHHHHhCCeEEEEcC
Confidence 4433 22222 35799999999999998764
No 75
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=58.96 E-value=86 Score=27.80 Aligned_cols=67 Identities=9% Similarity=0.081 Sum_probs=48.9
Q ss_pred HHHHHHHHHc----CCcCEEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeec
Q 024724 61 IGEMKKLVEE----GKIKYIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 61 ~~~l~~l~~~----Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~ 127 (263)
++.+.++++. +.=-+.|=+-++...++++++..-++++|+..+-+- -..-.++...|+.+|+.+...
T Consensus 285 ~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~GGit~~~kia~lA~~~gv~v~~H 356 (441)
T 4a35_A 285 ILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPH 356 (441)
T ss_dssp HHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 6777777763 333455667788889999998888899998766543 122367999999999998654
No 76
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=58.90 E-value=61 Score=27.76 Aligned_cols=101 Identities=13% Similarity=0.152 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEE-cCCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-. .. . ..++.+.+++++-.|-=.+ =+-++...++++++....+++|+..
T Consensus 200 ~~~~a~~~~~~l~~~~i~~iEqP--~~---~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 270 (370)
T 1nu5_A 200 DEQTASIWIPRLEEAGVELVEQP--VP---R----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKL 270 (370)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECC--SC---T----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHHHHhcCcceEeCC--CC---c----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEch
Confidence 45556565555445566666521 11 0 1267778888765443332 2446888999999988889999865
Q ss_pred CCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 103 SLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 103 n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
+-.- -..-.++...|+++|+.++..+.+.++
T Consensus 271 ~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 271 CNMGGIANTLKVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp HHHTSHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred hhcCCHHHHHHHHHHHHHcCCcEEecCCcchH
Confidence 5432 112367899999999999887765443
No 77
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=58.08 E-value=26 Score=28.41 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=24.3
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEecc
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTA 46 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA 46 (263)
+||+-++.+... .-...+.++.+-+.|+..++..
T Consensus 2 klg~~~~~~~~~------~~~~~~~l~~~~~~G~~~vEl~ 35 (286)
T 3dx5_A 2 KYSLCTISFRHQ------LISFTDIVQFAYENGFEGIELW 35 (286)
T ss_dssp EEEEEGGGGTTS------CCCHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEeeeccCC------CCCHHHHHHHHHHhCCCEEEEc
Confidence 577788776321 0235678888999999999974
No 78
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=57.80 E-value=76 Score=25.88 Aligned_cols=47 Identities=15% Similarity=0.189 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCC----chhHHHHhHHHHHHHHHc
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQN----ANETLLGKIGEMKKLVEE 70 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G----~sE~~lG~~~~l~~l~~~ 70 (263)
+.+++.++++.|.+.|++.+=.++++..+ ..|.+...++.++++.++
T Consensus 18 ~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~ 68 (262)
T 3qy7_A 18 DSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIK 68 (262)
T ss_dssp SHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 77889999999999999999888776432 345666667888887653
No 79
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=57.79 E-value=37 Score=29.58 Aligned_cols=100 Identities=7% Similarity=-0.052 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHHHcCC--CeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceEEecc
Q 024724 24 SEEDGISMIKHAFSKGI--TFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi--~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 101 (263)
+.+++.++++..-+.|+ .+|+--- . . ..++.+.+++++-.|.= |=+-++...++++++...++++|+.
T Consensus 199 ~~~~A~~~~~~l~~~~i~~~~iEqP~--~---~----~d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k 268 (391)
T 3gd6_A 199 NWKDAHRAIKRLTKYDLGLEMIESPA--P---R----NDFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNIS 268 (391)
T ss_dssp CHHHHHHHHHHHTTCCSSCCEEECCS--C---T----TCHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCcceecCCC--C---h----hhHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEEC
Confidence 56677777666666677 7776321 1 1 12667888887766554 8788899999999988888999987
Q ss_pred CCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 102 WSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 102 ~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
.+-+- -..-.++...|+++|+.++..+.+.++
T Consensus 269 ~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 269 PVFIGGLTSAKKAAYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred chhcCCHHHHHHHHHHHHHcCCEEEecCCCccH
Confidence 65432 112368999999999999887655444
No 80
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=57.25 E-value=31 Score=29.73 Aligned_cols=97 Identities=8% Similarity=0.009 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-. +. . ..++.+.+++++-.|-=.+- +-++...++++++....+++|+..
T Consensus 203 ~~~~a~~~~~~l~~~~i~~iEqP--~~---~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 273 (371)
T 2ovl_A 203 TVDGAIRAARALAPFDLHWIEEP--TI---P----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDV 273 (371)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECC--SC---T----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCT
T ss_pred CHHHHHHHHHHHHhcCCCEEECC--CC---c----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCc
Confidence 44555555555445566665422 11 0 11677777777644543333 445888999999888899999976
Q ss_pred CCccc-chhhhhHHHHHHhCCceeeccc
Q 024724 103 SLWTR-DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 103 n~~~~-~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
+-+-- ..-.++...|+++|+.++..+.
T Consensus 274 ~~~GGi~~~~~i~~~A~~~gi~~~~h~~ 301 (371)
T 2ovl_A 274 SNIGGYTTFRKVAALAEANNMLLTSHGV 301 (371)
T ss_dssp TTTTSHHHHHHHHHHHHHTTCCEEECSC
T ss_pred cccCCHHHHHHHHHHHHHcCCeEccccH
Confidence 65422 2236889999999999888544
No 81
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=56.46 E-value=98 Score=26.87 Aligned_cols=69 Identities=12% Similarity=-0.013 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.+++++-.|-=.+- +-++...++++++....+++|+..+-.-- ..-.++...|+.+|+.++..+.
T Consensus 258 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 258 SDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 666777766544443332 23466777777777777888877654321 1126788999999999887655
No 82
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=56.14 E-value=99 Score=26.69 Aligned_cols=97 Identities=13% Similarity=0.008 Sum_probs=65.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-. +. . ..++.+.+++++-.|-=.+- +-++...++++++....+++|+..
T Consensus 206 ~~~~a~~~~~~l~~~~i~~iEqP--~~---~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 276 (391)
T 2qgy_A 206 DLDQTKSFLKEVSSFNPYWIEEP--VD---G----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDI 276 (391)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECS--SC---T----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred CHHHHHHHHHHHHhcCCCeEeCC--CC---h----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 55666666666555677766532 11 0 12677888887655544433 345788999999988899999976
Q ss_pred CCccc-chhhhhHHHHHHhCCceeeccc
Q 024724 103 SLWTR-DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 103 n~~~~-~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
+-.-- ..-.++...|+++|+.++..+.
T Consensus 277 ~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 277 SGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred chhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 65422 1236889999999999887765
No 83
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=55.30 E-value=90 Score=25.93 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=27.3
Q ss_pred cceeccccCCCCCCCCCCH---HHHHHHHHHHHHcCCCeEeccCC
Q 024724 7 KLGLGCMNLSSGYSSPVSE---EDGISMIKHAFSKGITFFDTADV 48 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~---~~~~~~l~~A~~~Gi~~~DTA~~ 48 (263)
+||+-++.++..|... +. +...+.++.+-+.|+..++....
T Consensus 10 klg~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~G~~~vEl~~~ 53 (335)
T 2qw5_A 10 DIYISFFMFTTNLQPD-NLDYRRIVVAHIKKLQRFGYSGFEFPIA 53 (335)
T ss_dssp CEEEEGGGTCSCCCTT-CHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceeEEEeeecCCCChh-hhhccchHHHHHHHHHHhCCCEEEEecC
Confidence 5777787765443321 11 12337889999999999998754
No 84
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=55.26 E-value=63 Score=27.96 Aligned_cols=70 Identities=10% Similarity=0.023 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCcCEEEcC-CCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIKYIGLS-EASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.+++++-.|-=.+-- -++...++++++....+++|+..+-.-- ..-.++...|+++|+.++..+..
T Consensus 239 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 239 NGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 7788888877665544433 3467889999998889999997765422 12368999999999998886554
No 85
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=55.12 E-value=61 Score=28.14 Aligned_cols=68 Identities=12% Similarity=0.017 Sum_probs=46.3
Q ss_pred HHHHHHHH-HcCCcCEE-EcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecc
Q 024724 61 IGEMKKLV-EEGKIKYI-GLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 61 ~~~l~~l~-~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
++.+.+++ ++-.|-=. |=+-++...++++++...++++|+..+-+- -..-.++...|+++|+.++..+
T Consensus 235 ~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 235 IEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPHT 305 (389)
T ss_dssp HHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 67777777 55444322 223456777888888888888888766542 1223689999999999988763
No 86
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=54.85 E-value=74 Score=27.12 Aligned_cols=101 Identities=15% Similarity=0.180 Sum_probs=61.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEecc---------CCcCCCchhHHHHhHHHHHHHHHc-CCcCEEEcC--CC-CHHHHHH
Q 024724 22 PVSEEDGISMIKHAFSKGITFFDTA---------DVYGQNANETLLGKIGEMKKLVEE-GKIKYIGLS--EA-SPDTIRR 88 (263)
Q Consensus 22 ~~~~~~~~~~l~~A~~~Gi~~~DTA---------~~Yg~G~sE~~lG~~~~l~~l~~~-Gkir~iGvs--~~-~~~~l~~ 88 (263)
.++.++..++++...+.|+..++.. +.||+ ..+ ..++.++++++. ..++...+. +. ....+++
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~-~~~---~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~ 101 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGF-GRH---TDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKN 101 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBC-CSS---CHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccC-CCC---CHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHH
Confidence 3578899999999999999999995 11221 011 125666677665 234544442 22 4566666
Q ss_pred HhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeec
Q 024724 89 AHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 89 ~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~ 127 (263)
+.+. .++.+.+..++-+...-.+.+++++++|+.+..+
T Consensus 102 a~~a-Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 102 AYQA-GARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHHH-TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred HHhC-CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 6654 4444444332211122368899999999987765
No 87
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=54.78 E-value=78 Score=25.10 Aligned_cols=33 Identities=9% Similarity=0.207 Sum_probs=25.6
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccC
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTAD 47 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~ 47 (263)
+||+-++++.. ....+.++.+-+.|++.++...
T Consensus 11 klg~~~~~~~~--------~~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 11 RLGMQSYSFHL--------FPLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp EEEEEGGGGTT--------SCHHHHHHHHHHTTCCEEEECT
T ss_pred EEEEEecccCC--------CCHHHHHHHHHHcCCCEEeecC
Confidence 57888887732 2467788999999999999875
No 88
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=54.74 E-value=45 Score=26.93 Aligned_cols=27 Identities=19% Similarity=0.159 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYG 50 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg 50 (263)
++++..++.+.|.++|..|+=|+.-|+
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 678899999999999999999998776
No 89
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=53.50 E-value=37 Score=29.22 Aligned_cols=98 Identities=11% Similarity=0.075 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHH-HHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEecc
Q 024724 24 SEEDGISMIKHA-FSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A-~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~ 101 (263)
+.+++.++++.. -+.|+ +|+-.- . .++.+.+++++-.|-=.+- +-++.+.++++++....+++|+.
T Consensus 202 ~~~~a~~~~~~l~~~~~i-~iE~P~------~-----~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (371)
T 2ps2_A 202 SVETALRLLRLLPHGLDF-ALEAPC------A-----TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLK 269 (371)
T ss_dssp CHHHHHHHHHHSCTTCCC-EEECCB------S-----SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred CHHHHHHHHHHHHhhcCC-cCcCCc------C-----CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEec
Confidence 677888888777 67788 886321 1 4677888887655554443 34588899999888888999986
Q ss_pred CCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 102 WSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 102 ~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
-+-.- -..-.++...|+++|+.++..+.+..+
T Consensus 270 ~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 270 ISKAGGLTRGRRQRDICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTCEEEEECSSCCH
T ss_pred hhhcCCHHHHHHHHHHHHHcCCeEEecCCCcCH
Confidence 55431 111267889999999999887766544
No 90
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=53.28 E-value=81 Score=24.79 Aligned_cols=90 Identities=23% Similarity=0.284 Sum_probs=45.2
Q ss_pred cCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC-CCceEEeccCCCcc-----cchhh
Q 024724 38 KGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV-HPITAVQMEWSLWT-----RDIEE 111 (263)
Q Consensus 38 ~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~n~~~-----~~~~~ 111 (263)
.-|-|||.. |....|..+. -+.+++++.| |++|=|.+.+.+-..++++. ..+.++-+.++.-. .....
T Consensus 15 ~~~~YF~~~---G~eNT~~tl~--la~era~e~~-Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~ 88 (201)
T 1vp8_A 15 KKIVYFNKP---GRENTEETLR--LAVERAKELG-IKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPP 88 (201)
T ss_dssp CCCEEESSC---SGGGHHHHHH--HHHHHHHHHT-CCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCH
T ss_pred heEEEecCC---CcccHHHHHH--HHHHHHHHcC-CCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCH
Confidence 345555532 2222455554 4455555544 66666655543333333222 12223322332222 22347
Q ss_pred hhHHHHHHhCCceeecccCcCc
Q 024724 112 EIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 112 ~~~~~~~~~gi~v~a~~~l~~G 133 (263)
+..+..++.|+.++..+=+-+|
T Consensus 89 e~~~~L~~~G~~V~t~tH~lsg 110 (201)
T 1vp8_A 89 EVEEELRKRGAKIVRQSHILSG 110 (201)
T ss_dssp HHHHHHHHTTCEEEECCCTTTT
T ss_pred HHHHHHHhCCCEEEEEeccccc
Confidence 8999999999999876554444
No 91
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=53.15 E-value=62 Score=28.07 Aligned_cols=101 Identities=8% Similarity=0.023 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-.- . . ..++.+.+++++-.|-=.+- +-++...++++++....+++|+..
T Consensus 201 ~~~~a~~~~~~l~~~~i~~iEqP~--~---~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 271 (397)
T 2qde_A 201 TYDQALTTIRALEKYNLSKIEQPL--P---A----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKT 271 (397)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECCS--C---T----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred CHHHHHHHHHHHHhCCCCEEECCC--C---h----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 445555555544455666555221 1 0 12677888887655543333 445788899998888888998865
Q ss_pred CCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 103 SLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 103 n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
+-.-- ..-.++...|+++|+.++..+.+.++
T Consensus 272 ~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 303 (397)
T 2qde_A 272 QKAGGLLKAQRWLTLARLANLPVICGCMVGSG 303 (397)
T ss_dssp HHHTSHHHHHHHHHHHHHHTCCEEECCCSCCH
T ss_pred cccCCHHHHHHHHHHHHHcCCeEEEecCcccH
Confidence 54311 11267899999999999887655544
No 92
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=52.52 E-value=45 Score=28.51 Aligned_cols=70 Identities=9% Similarity=0.019 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.+++++-.|- ..|=+-++...++++++....+++|+..+-+- -..-.++...|+++|+.++..+.+
T Consensus 223 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 223 LEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 67777777654432 22334567777778877777778877654321 111267899999999999887776
No 93
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=52.37 E-value=77 Score=27.52 Aligned_cols=70 Identities=9% Similarity=-0.085 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.+++++-.|-=.+- +-++...++++++....+++|+..+-+-- ..-.++...|+++|+.++..+..
T Consensus 255 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 255 PAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 778888887755554443 33477888999988889999987765421 12368999999999998886553
No 94
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=51.69 E-value=87 Score=24.69 Aligned_cols=77 Identities=19% Similarity=0.156 Sum_probs=41.0
Q ss_pred hhHHHHhHHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCC--CceEEeccCCCc---ccchhhhhHHHHHHhCCceeecc
Q 024724 54 NETLLGKIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVH--PITAVQMEWSLW---TRDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 54 sE~~lG~~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~n~~---~~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
.|..+. -+.+++++.| |++|=|.+.+-+-..++++.. ++.++-..+..- ......+..+..++.|+.++...
T Consensus 36 T~~tl~--la~era~e~~-Ik~iVVASssG~TA~k~~e~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~t 112 (206)
T 1t57_A 36 TERVLE--LVGERADQLG-IRNFVVASVSGETALRLSEMVEGNIVSVTHHAGFREKGQLELEDEARDALLERGVNVYAGS 112 (206)
T ss_dssp HHHHHH--HHHHHHHHHT-CCEEEEECSSSHHHHHHHTTCCSEEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEECCS
T ss_pred HHHHHH--HHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHccCCEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEee
Confidence 444444 4455555444 666666555444444444432 333332222222 22234789999999999988755
Q ss_pred cCcCc
Q 024724 129 PLGRG 133 (263)
Q Consensus 129 ~l~~G 133 (263)
=+-+|
T Consensus 113 H~lsG 117 (206)
T 1t57_A 113 HALSG 117 (206)
T ss_dssp CTTTT
T ss_pred ccccc
Confidence 44444
No 95
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=50.75 E-value=81 Score=27.49 Aligned_cols=73 Identities=12% Similarity=-0.019 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+++++-.|- ..|=+-++...++++++...++++|+..+-+- -..-.++...|+.+|+.++..+.+..+
T Consensus 244 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 318 (400)
T 3mwc_A 244 LLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGTMPESG 318 (400)
T ss_dssp HHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSCCCH
T ss_pred HHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEecCCCCCH
Confidence 77777777764443 33445668888888888888888888655431 111367899999999999876655443
No 96
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=50.75 E-value=44 Score=28.64 Aligned_cols=73 Identities=8% Similarity=0.089 Sum_probs=53.8
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+|+++-.|. +.|=|-++...+.++++..-++++|+....+-- ..-.++...|+++|+.++..+.+.++
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 228 TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCH
T ss_pred hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccH
Confidence 78899998876653 445566789999999998888999886553211 11267889999999998776666544
No 97
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=50.71 E-value=65 Score=27.97 Aligned_cols=70 Identities=9% Similarity=-0.097 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCCcCEEEcC-CCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIKYIGLS-EASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.+++++-.|-=.+-- -++...++++++....+++|+..+-.-- ..-.++...|+++|+.++..+..
T Consensus 249 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 249 PRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp THHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred HHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 5566666665444333322 2355666777766667777765443211 11267889999999998886553
No 98
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=50.31 E-value=27 Score=29.95 Aligned_cols=100 Identities=11% Similarity=0.142 Sum_probs=65.3
Q ss_pred CHHHHHHHHHHHHH--cCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEE-EcCCCCHHHHHHHhcCCCceEEec
Q 024724 24 SEEDGISMIKHAFS--KGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHGVHPITAVQM 100 (263)
Q Consensus 24 ~~~~~~~~l~~A~~--~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~q~ 100 (263)
+.+++.++++..-+ .|+.+|+-- .. . ..++.+.+++++-.|-=. |=+-++...++++++....+++|+
T Consensus 197 ~~~~a~~~~~~l~~~~~~i~~iEqP--~~---~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 267 (366)
T 1tkk_A 197 RPKEAVTAIRKMEDAGLGIELVEQP--VH---K----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINI 267 (366)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECC--SC---T----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHHhhcCCCceEEECC--CC---c----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEe
Confidence 56677777776556 677777522 11 1 126667777776544433 334568888999888888888888
Q ss_pred cCCCcc-cchhhhhHHHHHHhCCceeecccCcC
Q 024724 101 EWSLWT-RDIEEEIIPLCRELGIGIVPYSPLGR 132 (263)
Q Consensus 101 ~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~ 132 (263)
..+-.- -..-.++...|+++|+.++..+.+..
T Consensus 268 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 300 (366)
T 1tkk_A 268 KLMKAGGISGAEKINAMAEACGVECMVGSMIET 300 (366)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTCCEEECCSSCC
T ss_pred ehhhhcCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 655431 11126789999999999988766543
No 99
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=50.18 E-value=1e+02 Score=26.62 Aligned_cols=73 Identities=10% Similarity=-0.032 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCc-CEEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKI-KYIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+++++-.+ -..|=+-++...++++++...++++|+..+-+- -..-.++...|+++|+.++..+.+.++
T Consensus 233 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 307 (381)
T 3fcp_A 233 NAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGT 307 (381)
T ss_dssp HHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCCccH
Confidence 6778888876443 344556678899999998888899998655422 112367899999999999876665543
No 100
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=49.31 E-value=20 Score=31.08 Aligned_cols=98 Identities=5% Similarity=0.061 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCE-EEcCCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+ +|+--- -.++.+.+++++-.|-= .|=+-++...++++++...++++|+..
T Consensus 201 ~~~~a~~~~~~l~~~~i-~iEqP~-----------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~ 268 (378)
T 3eez_A 201 TRQQALRVMRATEDLHV-MFEQPG-----------ETLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKL 268 (378)
T ss_dssp CHHHHHHHHHHTGGGTC-CEECCS-----------SSHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEH
T ss_pred CHHHHHHHHHHhccCCe-EEecCC-----------CCHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 56677777776666777 776321 13667777777655542 333557888999999888889999865
Q ss_pred CCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 103 SLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 103 n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
.-+- -..-.++...|+++|+.++..+.+.++
T Consensus 269 ~~~GGit~~~~ia~~A~~~g~~~~~~~~~es~ 300 (378)
T 3eez_A 269 NRVGGLTRAARMRDIALTHGIDMFVMATGGSV 300 (378)
T ss_dssp HHHTSHHHHHHHHHHHHHTTCEEEEECSSCSH
T ss_pred hhcCCHHHHHHHHHHHHHcCCEEEcCCCCCCH
Confidence 5432 112367899999999999877666554
No 101
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=48.70 E-value=69 Score=25.44 Aligned_cols=64 Identities=16% Similarity=0.226 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHc--CCcCEEEcCCC-CHHHHHHHhcC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEE--GKIKYIGLSEA-SPDTIRRAHGV 92 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~--Gkir~iGvs~~-~~~~l~~~~~~ 92 (263)
+.++..++.+.+.++|+.++.|+.-|..|. ..++.+..+++. ++|.=++.... +.+...++++.
T Consensus 130 ~~~~~~~~a~~a~eaGad~I~tstg~~~gg-----a~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~a 196 (225)
T 1mzh_A 130 NEEEIKKAVEICIEAGADFIKTSTGFAPRG-----TTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEA 196 (225)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSCSSSC-----CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCEEEECCCCCCCC-----CCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHh
Confidence 677899999999999999999986443221 124444445442 46766666654 56777777664
No 102
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=48.68 E-value=90 Score=27.05 Aligned_cols=73 Identities=10% Similarity=0.020 Sum_probs=50.8
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.++.++-.|. +.|=|-++...+.++++...++++|+..+-+-- ..-.++...|+.+|+.++..+.+..+
T Consensus 229 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 303 (388)
T 3qld_A 229 WFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVGGMYETG 303 (388)
T ss_dssp HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEecCccchH
Confidence 77788887764442 445566788888888887778888886554311 11267999999999999876655443
No 103
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=48.05 E-value=82 Score=25.92 Aligned_cols=28 Identities=21% Similarity=0.304 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQ 51 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~ 51 (263)
++++..++.+.|.++|..|+=|+.-|+.
T Consensus 171 t~eei~~A~~ia~eaGADfVKTSTGf~~ 198 (260)
T 3r12_A 171 DTEEKIAACVISKLAGAHFVKTSTGFGT 198 (260)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHhCcCEEEcCCCCCC
Confidence 7788999999999999999999976654
No 104
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=45.83 E-value=1e+02 Score=25.28 Aligned_cols=40 Identities=13% Similarity=-0.016 Sum_probs=27.4
Q ss_pred ccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcC
Q 024724 6 SKLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG 50 (263)
Q Consensus 6 s~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg 50 (263)
.+||+-++.+...|. .....+++.|-+.|++.++....+.
T Consensus 20 ~~lgi~~~~~~~~~~-----~~~~~~~~~a~~~G~~~vEl~~~~~ 59 (316)
T 3qxb_A 20 MKLGVNLCFAVKRWL-----EPDRLAGLVRDDLGLEYVQYTYDLT 59 (316)
T ss_dssp CCEEEEGGGGTTTSC-----SHHHHHHHHHHTSCCCEEEEETTTS
T ss_pred ccceecchHHHhccC-----CHHHHHHHHHHHcCCCEEEeecccc
Confidence 467777777654332 2345577788899999999876543
No 105
>2c35_A Human RPB4, DNA-directed RNA polymerase II 16 kDa polypeptide; transcription, nucleotidyltransferase; 2.70A {Homo sapiens} SCOP: a.60.8.2
Probab=45.59 E-value=24 Score=26.52 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCCcc
Q 024724 166 NIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIEEV 237 (263)
Q Consensus 166 ~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~~~ 237 (263)
+.+..+.+...+++++..+++.= +=....++++++..+...+.+++++++.+|-..+.+++-
T Consensus 88 e~~~~l~e~L~~~~L~~~E~a~L----------~NL~P~t~dEar~lipsl~~r~sdEeLe~ILd~l~k~r~ 149 (152)
T 2c35_A 88 ETIASVRSLLLQKKLHKFELACL----------ANLCPETAEESKALIPSLEGRFEDEELQQILDDIQTKRS 149 (152)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHH----------HHHCCSSHHHHHHHCGGGTTTSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHh----------ccCCCCCHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHh
Confidence 44456667777889998887732 122345899999999988889999999988887665443
No 106
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=45.29 E-value=1.3e+02 Score=25.03 Aligned_cols=141 Identities=11% Similarity=0.131 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCc-CCC----chhHHHHh-HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceE
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVY-GQN----ANETLLGK-IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITA 97 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Y-g~G----~sE~~lG~-~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~ 97 (263)
+.+.+.+..+..++.|...+|..-.. .+| ..|+.+-+ ...++.+++.+. -|.|-+++++.++++++....-+
T Consensus 44 ~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~v--piSIDT~~~~Va~aAl~aGa~iI 121 (294)
T 2y5s_A 44 ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNV--PLSIDTYKPAVMRAALAAGADLI 121 (294)
T ss_dssp CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCS--CEEEECCCHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCC--eEEEECCCHHHHHHHHHcCCCEE
Confidence 55677777778889999999986422 233 12344444 456666665533 47888999999999998744323
Q ss_pred EeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHH
Q 024724 98 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKK 177 (263)
Q Consensus 98 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~ 177 (263)
|-+ |-.. ..++++.++++|..++.+.. +|. +.... ...+.|. .-.++..+.+.+..+.|.+
T Consensus 122 NdV--sg~~---d~~m~~~~a~~~~~vVlmh~--~G~------p~tm~-----~~~~~y~-dv~~ev~~~l~~~i~~a~~ 182 (294)
T 2y5s_A 122 NDI--WGFR---QPGAIDAVRDGNSGLCAMHM--LGE------PQTMQ-----VGEPDYG-DVVTDVRDFLAARAQALRD 182 (294)
T ss_dssp EET--TTTC---STTHHHHHSSSSCEEEEECC--CEE------TTTTE-----ECCCCCS-SHHHHHHHHHHHHHHHHHH
T ss_pred EEC--CCCC---chHHHHHHHHhCCCEEEECC--CCC------Ccccc-----ccCCccc-cHHHHHHHHHHHHHHHHHH
Confidence 332 3222 34789999999999998765 332 11110 0012221 1223445556666677778
Q ss_pred cCCCHHHH
Q 024724 178 YKCTSAQL 185 (263)
Q Consensus 178 ~g~s~~q~ 185 (263)
+|+.+.++
T Consensus 183 ~Gi~~~~I 190 (294)
T 2y5s_A 183 AGVAAERI 190 (294)
T ss_dssp TTCCGGGE
T ss_pred cCCChhhE
Confidence 88776554
No 107
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=45.16 E-value=1.2e+02 Score=25.01 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhH-HHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceEEecc
Q 024724 23 VSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKI-GEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAVQME 101 (263)
Q Consensus 23 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~-~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 101 (263)
++.++..++++...+.|+..++... ......+..++.. +.+..+.+...++..++. .+...++++.+. .++.+.+.
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~-~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~a-g~~~v~i~ 100 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTS-FVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAA-GAKEVVIF 100 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEE-CCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHT-TCSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECC-CcCcccccccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHC-CCCEEEEE
Confidence 4788999999999999999999863 1111123333432 223333332233333333 456777777765 33444443
Q ss_pred CCCcc--------cch------hhhhHHHHHHhCCceeec
Q 024724 102 WSLWT--------RDI------EEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 102 ~n~~~--------~~~------~~~~~~~~~~~gi~v~a~ 127 (263)
.+.-+ ... -.+.+++++++|+.+..+
T Consensus 101 ~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 101 GAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp EESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 32211 110 146789999999988654
No 108
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=45.09 E-value=49 Score=26.48 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=22.8
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccC
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTAD 47 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~ 47 (263)
++++-++.+. .....+.++.+-+.|+..++...
T Consensus 5 k~~~~~~~~~--------~~~~~~~l~~~~~~G~~~vEl~~ 37 (281)
T 3u0h_A 5 EPCLHPTLVD--------ETSLVLYLDLARETGYRYVDVPF 37 (281)
T ss_dssp EEEECGGGTT--------CCCHHHHHHHHHHTTCSEECCCH
T ss_pred hhhhcchhcc--------CCCHHHHHHHHHHcCCCEEEecH
Confidence 4666665442 12356788888999999999764
No 109
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=45.09 E-value=1.4e+02 Score=25.88 Aligned_cols=68 Identities=15% Similarity=0.130 Sum_probs=49.5
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.+++++-.|- ..|=+-++...++++++.. ++++|+..+-+- -..-.++...|+.+|+.++..+.
T Consensus 231 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 231 VGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 67788888765443 2233456888999998888 999999776542 11236899999999999987665
No 110
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=44.73 E-value=67 Score=27.46 Aligned_cols=72 Identities=11% Similarity=0.026 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcC
Q 024724 61 IGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGR 132 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~ 132 (263)
++.+.++++.-.|-=.+- +-++...++++++....+++|+.-+-.-- ..-.++...|+++|+.++..+.+..
T Consensus 226 ~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 299 (369)
T 2p8b_A 226 IDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVES 299 (369)
T ss_dssp HHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSCC
T ss_pred HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCcc
Confidence 666777776644443332 33567777777777777777775543211 1126788999999999987665443
No 111
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=44.63 E-value=1.2e+02 Score=24.33 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=24.9
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCC
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADV 48 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~ 48 (263)
+||+-++.+.. ....+.++.+-+.|+..++....
T Consensus 27 klg~~~~~~~~--------~~~~~~l~~~~~~G~~~vEl~~~ 60 (287)
T 3kws_A 27 KLSFQEGIAPG--------ESLNEKLDFMEKLGVVGFEPGGG 60 (287)
T ss_dssp EEEEETTSSCC--------SSHHHHHHHHHHTTCCEEECBST
T ss_pred eEEEEecccCC--------CCHHHHHHHHHHcCCCEEEecCC
Confidence 56777776632 24677888889999999997654
No 112
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=44.62 E-value=89 Score=25.98 Aligned_cols=103 Identities=11% Similarity=0.188 Sum_probs=61.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh-HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceEEec
Q 024724 22 PVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAVQM 100 (263)
Q Consensus 22 ~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~ 100 (263)
.++.++..++++.+-+.|+..|+....-.+ ..-..++. ++.+..+.+...++..++. .+.+.++++++. .++.+.+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~a-G~~~v~i 102 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSP-KWVPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALES-GVKEVAV 102 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCT-TTCGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHT-TCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCc-cccccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhC-CcCEEEE
Confidence 357899999999999999999998631100 11122232 2233444444455555555 477788888775 4455554
Q ss_pred cCCCcc--------cchh------hhhHHHHHHhCCceeec
Q 024724 101 EWSLWT--------RDIE------EEIIPLCRELGIGIVPY 127 (263)
Q Consensus 101 ~~n~~~--------~~~~------~~~~~~~~~~gi~v~a~ 127 (263)
....-+ ...+ .+.+++++++|+.+.++
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~ 143 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY 143 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 222211 1111 67899999999988643
No 113
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=44.52 E-value=95 Score=24.71 Aligned_cols=28 Identities=25% Similarity=0.407 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQ 51 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~ 51 (263)
++++...+.+.|.++|..|+=|+.-|+.
T Consensus 131 ~~e~i~~a~~ia~eaGADfVKTsTGf~~ 158 (220)
T 1ub3_A 131 SPEEIARLAEAAIRGGADFLKTSTGFGP 158 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 6788999999999999999999977763
No 114
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=44.48 E-value=1.4e+02 Score=25.42 Aligned_cols=67 Identities=15% Similarity=0.095 Sum_probs=50.7
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeec
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~ 127 (263)
++.+.+|+++-.+. +.|=|-++...+.++++...++++|+...-+-- ..-.++...|+++|+.++..
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v~~h 296 (378)
T 4hpn_A 228 LDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRIVPH 296 (378)
T ss_dssp HHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHHTCEECCB
T ss_pred hhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHcCCeEEeC
Confidence 78888888776553 456677888999999998889999987664321 11368899999999997543
No 115
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=43.67 E-value=1.3e+02 Score=26.74 Aligned_cols=66 Identities=14% Similarity=0.147 Sum_probs=46.9
Q ss_pred HHHHHHHHHc-C-CcCEEEcCCC--CHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceee
Q 024724 61 IGEMKKLVEE-G-KIKYIGLSEA--SPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 61 ~~~l~~l~~~-G-kir~iGvs~~--~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a 126 (263)
|+.+.+|.++ | .|--.|=-.+ ++..++++++..-.+++|+..+-.-- ..-.++...|+.+|+.++.
T Consensus 319 ~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v 389 (449)
T 3uj2_A 319 WEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVV 389 (449)
T ss_dssp HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 8888888876 3 4444453333 58899999988888889887664321 1136789999999999554
No 116
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=43.53 E-value=1.1e+02 Score=26.40 Aligned_cols=96 Identities=7% Similarity=-0.095 Sum_probs=62.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-. .. . ..++.+.+++++-.|-=.+- +-++...++++++....+++|+..
T Consensus 219 ~~~~a~~~~~~l~~~~i~~iE~P--~~---~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 289 (393)
T 2og9_A 219 DRPTAQRMCRIFEPFNLVWIEEP--LD---A----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDA 289 (393)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECC--SC---T----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CHHHHHHHHHHHHhhCCCEEECC--CC---c----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCc
Confidence 45666666665445666666521 11 0 12677788887655544433 445888999999888889998865
Q ss_pred CCcc-cchhhhhHHHHHHhCCceeecc
Q 024724 103 SLWT-RDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 103 n~~~-~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
+-.- -..-.++...|+++|+.++..+
T Consensus 290 ~~~GGit~~~~i~~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 290 PRVGGITPFLKIASLAEHAGLMLAPHF 316 (393)
T ss_dssp HHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred cccCCHHHHHHHHHHHHHcCCEEeccC
Confidence 5321 1112689999999999987543
No 117
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=43.45 E-value=1.7e+02 Score=25.65 Aligned_cols=95 Identities=6% Similarity=0.026 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCC-cCEEE-cCCCCHHHHHHHhcCCCceEEecc
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGK-IKYIG-LSEASPDTIRRAHGVHPITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gk-ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~ 101 (263)
+.+++.++++..-+.|+.+|+-. .. . ..++.+.+++++-. |-=.+ =+-++...++++++....+++|+.
T Consensus 241 ~~~eai~~~~~L~~~~i~~iEqP--~~---~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 241 TMADARRVLPVLAEIQAGWLEEP--FA---C----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp CHHHHHHHHHHHHHTTCSCEECC--SC---T----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred CHHHHHHHHHHHHhcCCCEEECC--CC---c----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 56677777766556777777632 11 1 12667788876644 43333 344688999999998889999998
Q ss_pred CCCccc-chhhhhHHHHHHhCCceeec
Q 024724 102 WSLWTR-DIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 102 ~n~~~~-~~~~~~~~~~~~~gi~v~a~ 127 (263)
.+-.-- ..-.++...|+++|+.++..
T Consensus 312 ~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 312 LSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp TTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 765422 12368999999999998776
No 118
>3h87_C Putative uncharacterized protein; toxin antitoxin complex, vapbc complex, RHH motif, structura genomics; 1.49A {Mycobacterium tuberculosis}
Probab=43.18 E-value=67 Score=20.92 Aligned_cols=57 Identities=7% Similarity=0.049 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccC-CCcHHHHHHhhhccCCCCCHHHHH
Q 024724 166 NIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPG-TTKIKNLDDNIDSLRIKLTKEDLK 226 (263)
Q Consensus 166 ~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g-~~~~~~l~enl~a~~~~Lt~e~~~ 226 (263)
+...+|+..|+++|.|..+-....+-.- +.-+| ..+.+.++.-.+.+.--.+++-|+
T Consensus 12 ev~~~L~~rAa~~G~S~~~ylr~~Le~~----a~~~~~~~~~~~l~r~~~~~~dl~D~~~m~ 69 (73)
T 3h87_C 12 DVLASLDAIAARLGLSRTEYIRRRLAQD----AQTARVTVTAADLRRLRGAVAGLGDPELMR 69 (73)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHH----HTSCCCCCCHHHHHHHHHHSGGGGCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHH----hcCCcccccHHHHHHHHHHHcccCCHHHHH
Confidence 4557999999999999999887776431 12234 567777777665554344444443
No 119
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=43.04 E-value=1e+02 Score=26.63 Aligned_cols=73 Identities=11% Similarity=0.027 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+++++-.|. ..|=+-++...++++++...++++|+..+-+- -..-.++...|+.+|+.++..+.+.++
T Consensus 234 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 308 (382)
T 3dgb_A 234 RAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLEGG 308 (382)
T ss_dssp HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecCCCccH
Confidence 67788888764443 44556678889999988888888988655432 111367889999999999876665543
No 120
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=41.72 E-value=93 Score=27.07 Aligned_cols=70 Identities=9% Similarity=-0.025 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.+++++-.|-=.+- +-++...++++++....+++|+..+-.-- ..-.++...|+++|+.++..+..
T Consensus 250 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 250 LDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp HHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 778888887655543333 34588899999988888999886554211 11267889999999998876553
No 121
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=41.70 E-value=1.1e+02 Score=24.53 Aligned_cols=27 Identities=11% Similarity=0.305 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYG 50 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg 50 (263)
++++..++.+.+.++|..|+=|+.-|+
T Consensus 126 t~eei~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 126 RDEERYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 678899999999999999999997776
No 122
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=41.50 E-value=76 Score=27.44 Aligned_cols=73 Identities=12% Similarity=0.043 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+++++-.+. ..|=+-++...+.++++...++++|+..+-.- -..-.++...|+++|+.++..+.+.++
T Consensus 232 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 306 (385)
T 3i6e_A 232 FELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEAG 306 (385)
T ss_dssp HHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCCCCccH
Confidence 67788888765443 44446678889999988888888988655321 111267999999999999776555444
No 123
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=41.23 E-value=11 Score=26.15 Aligned_cols=25 Identities=24% Similarity=0.472 Sum_probs=23.0
Q ss_pred hhhHHHHHHhCCceeecccCcCccc
Q 024724 111 EEIIPLCRELGIGIVPYSPLGRGFF 135 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~l~~G~L 135 (263)
..+++.++++||.++-.-||++.+.
T Consensus 45 ~~I~~~A~e~gVPi~e~~~LAr~L~ 69 (97)
T 3t7y_A 45 KRIIAEAEKYGVPIMRNVPLAHQLL 69 (97)
T ss_dssp HHHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEECHHHHHHHH
Confidence 6799999999999999999998776
No 124
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=41.14 E-value=1.3e+02 Score=26.01 Aligned_cols=68 Identities=10% Similarity=0.074 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~ 128 (263)
++.+.+++++-.|- ..|=+-++...++++++...++++|+..+-+-- ..-.++...|+.+|+.++..+
T Consensus 246 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 315 (394)
T 3mkc_A 246 LSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVMPHN 315 (394)
T ss_dssp HHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 67788888765554 334455678889999998889999987765421 123679999999999998655
No 125
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=41.04 E-value=1.3e+02 Score=26.11 Aligned_cols=96 Identities=13% Similarity=-0.032 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-. .. . ..++.+.+++++-.|-=.+- +-++...++++++....+++|+..
T Consensus 232 ~~~~ai~~~~~l~~~~i~~iEqP--~~---~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 302 (398)
T 2pp0_A 232 DRETAIRMGRKMEQFNLIWIEEP--LD---A----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDA 302 (398)
T ss_dssp CHHHHHHHHHHHGGGTCSCEECC--SC---T----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CHHHHHHHHHHHHHcCCceeeCC--CC---h----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 34555555554334455555421 11 0 11677888887655543333 445888999999888889998865
Q ss_pred CCcc-cchhhhhHHHHHHhCCceeecc
Q 024724 103 SLWT-RDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 103 n~~~-~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
+-.- -..-.++...|+++|+.++...
T Consensus 303 ~~~GGite~~~i~~~A~~~gi~~~~h~ 329 (398)
T 2pp0_A 303 PRVGGISPFLKIMDLAAKHGRKLAPHF 329 (398)
T ss_dssp HHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred cccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 5321 1112689999999999987543
No 126
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=40.74 E-value=1.4e+02 Score=25.20 Aligned_cols=100 Identities=10% Similarity=0.103 Sum_probs=67.1
Q ss_pred CHHHHHHHHHHHHHcCCC--eEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEec
Q 024724 24 SEEDGISMIKHAFSKGIT--FFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQM 100 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~--~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~ 100 (263)
+.+++.++++..-+.|+. +|+-.- . . ..++.+.+++++-.|-=.+- +-++...++++++....+++|+
T Consensus 194 ~~~~a~~~~~~l~~~~i~~~~iE~P~--~---~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 194 TQKEAVEFARAVYQKGIDIAVYEQPV--R---R----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEECCS--C---T----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHHHhcCCCeeeeeCCC--C---c----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 667888888776678888 887321 1 1 12566777777655543333 4468889999988888888988
Q ss_pred cCCCcccchhhhhHHHHHHhCCceeecccCcC
Q 024724 101 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR 132 (263)
Q Consensus 101 ~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~ 132 (263)
..+----..-..+...|+++|+.++..+.+..
T Consensus 265 k~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 296 (345)
T 2zad_A 265 KLMKSGISDALAIVEIAESSGLKLMIGCMGES 296 (345)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTCEEEECCSSCC
T ss_pred ecccccHHHHHHHHHHHHHcCCeEEEecCccc
Confidence 54430011126788999999999988766543
No 127
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=40.58 E-value=82 Score=27.53 Aligned_cols=67 Identities=4% Similarity=-0.073 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCcCEE-EcCCCCHHHHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeec
Q 024724 61 IGEMKKLVEEGKIKYI-GLSEASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~ 127 (263)
++.+.+++++-.|-=. |=+-++...++++++...++++|+..+----..-.++...|+++|+.++..
T Consensus 251 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~GGit~~~~ia~~A~~~gi~~~~h 318 (409)
T 3go2_A 251 PQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVAIVDTIWNGVWQSMKIAAFADAHDINVAPH 318 (409)
T ss_dssp HHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEEEECHHHHCHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEeCCCCCCHHHHHHHHHHHHHcCCEEeec
Confidence 7778888887555433 334567788999998888999998764310111267999999999999864
No 128
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=40.43 E-value=1.2e+02 Score=25.96 Aligned_cols=95 Identities=9% Similarity=0.023 Sum_probs=61.2
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEE-cCCCCHHHHHHHhcCCCceEEecc
Q 024724 24 SEEDGISMIKHAFSK-GITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHGVHPITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~-Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~q~~ 101 (263)
+.+++.++++..-+. |+.+|+-.- . . ..++.+.+++++-.|-=.+ =+-++...++++++....+++|+.
T Consensus 196 ~~~~a~~~~~~l~~~~~i~~iEqP~--~---~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 196 DAAAAFKWERYFSEWTNIGWLEEPL--P---F----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp CHHHHHTTHHHHTTCSCEEEEECCS--C---S----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred CHHHHHHHHHHHhhccCCeEEECCC--C---c----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 445555555554445 555555221 1 0 1266778888765554333 344678899999988889999987
Q ss_pred CCCccc-chhhhhHHHHHHhCCceeec
Q 024724 102 WSLWTR-DIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 102 ~n~~~~-~~~~~~~~~~~~~gi~v~a~ 127 (263)
.+-.-- ..-.++...|+++|+.++..
T Consensus 267 ~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 267 VMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp TTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 665321 11368999999999998876
No 129
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=40.43 E-value=27 Score=30.56 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.++++.-.+. +.|=+-++...+.++++...++++|+...-+-- ..-.++...|+++|+.++..+.+.++
T Consensus 247 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 321 (391)
T 4e8g_A 247 LEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALPHSCDDAWGGD 321 (391)
T ss_dssp HHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCCEEEECSSCSH
T ss_pred HHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEeCCcCCCH
Confidence 67788887765443 445566788999999988888999986554321 11367999999999999887766654
No 130
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=40.35 E-value=1.7e+02 Score=25.86 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCcCEEEcCC--CCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceee
Q 024724 61 IGEMKKLVEEGKIKYIGLSE--ASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGvs~--~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a 126 (263)
|+.+.+|.++.+|-=.|=-. .++..++++++..-.+++|+..|-.-- ..-.++...|+.+|+.++.
T Consensus 300 ~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 300 WAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp HHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 89999999987776555333 488999999998888899987653321 1126789999999998765
No 131
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=40.27 E-value=1.9e+02 Score=25.22 Aligned_cols=97 Identities=10% Similarity=0.124 Sum_probs=67.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEecc-CCcCCCchhHHHHhHHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEecc
Q 024724 24 SEEDGISMIKHAFSKGITFFDTA-DVYGQNANETLLGKIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA-~~Yg~G~sE~~lG~~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~ 101 (263)
+.+++.++++..-+.|+.+|+-. -.. + .++.+.+++++-.|- ..|=+-++...++++++...++++|+.
T Consensus 225 ~~~~A~~~~~~L~~~~i~~iEqP~~~~-----~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 225 GTHAAARICNALADYGVLWVEDPIAKM-----D----NIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp CHHHHHHHHHHGGGGTCSEEECCBSCT-----T----CHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCCCc-----c----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 66777777776667788888742 111 1 245567777654443 334456788999999998889999998
Q ss_pred CCCccc-chhhhhHHHHHHhCCceeeccc
Q 024724 102 WSLWTR-DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 102 ~n~~~~-~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
.+-.-- ..-.++...|+.+|+.+...++
T Consensus 296 ~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 296 LTWCGGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp TTTSSCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEeeeCc
Confidence 776432 2236799999999999987665
No 132
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=39.84 E-value=1.1e+02 Score=26.42 Aligned_cols=101 Identities=10% Similarity=0.027 Sum_probs=67.1
Q ss_pred CHHHHHHHHHHHHH--cCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCc-CEEEcCCCCHHHHHHHhcCCCceEEec
Q 024724 24 SEEDGISMIKHAFS--KGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHGVHPITAVQM 100 (263)
Q Consensus 24 ~~~~~~~~l~~A~~--~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~q~ 100 (263)
+.+++.++++..-+ .|+.+|+=.-. .+ .++.+.+++++-.+ -+.|=+-++...+.++++....+++|+
T Consensus 198 ~~~~A~~~~~~l~~~~~~l~~iEeP~~-----~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 268 (379)
T 3r0u_A 198 NLAQTKQFIEEINKYSLNVEIIEQPVK-----YY----DIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINI 268 (379)
T ss_dssp CHHHHHHHHHHHHTSCCCEEEEECCSC-----TT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEE
T ss_pred CHHHHHHHHHHHhhcCCCcEEEECCCC-----cc----cHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEE
Confidence 56677777666656 56777763211 11 15667777765443 344556788899999998888889988
Q ss_pred cCCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 101 EWSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 101 ~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
...-.- -..-.++...|+++|+.++..+.+.++
T Consensus 269 k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 269 KLAKTGGILEAQKIKKLADSAGISCMVGCMMESP 302 (379)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCH
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEEEeCCCccH
Confidence 655432 111367999999999999887665544
No 133
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=39.56 E-value=1.8e+02 Score=24.83 Aligned_cols=67 Identities=12% Similarity=-0.016 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCCcCEEEc-CCCC-HHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeec
Q 024724 61 IGEMKKLVEEGKIKYIGL-SEAS-PDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGv-s~~~-~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~ 127 (263)
++.+.+++++-.|-=.+- +-++ ...++++++....+++|+..+-.- -..-.++...|+++|+.++..
T Consensus 240 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 240 LSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp HHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 677888887655544433 3457 889999999888999998655431 111267899999999998886
No 134
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=39.49 E-value=1.9e+02 Score=25.24 Aligned_cols=68 Identities=15% Similarity=-0.009 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCCcC---EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecc
Q 024724 61 IGEMKKLVEEGKIK---YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 61 ~~~l~~l~~~Gkir---~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
++.+.+|+++-.+- +.|=+-++...++++++..-++++|+..+-.- -..-.++...|+.+|+.++..+
T Consensus 250 ~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~d~~~~GGitea~kia~lA~a~gv~v~~h~ 321 (404)
T 3ekg_A 250 YWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQPDVGWCGGVTELLKISALADAHNALVVPHG 321 (404)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEecChhhcCCccHHHHHHHHHHHcCCEEEecC
Confidence 77888888875542 55667778889999998888999998776542 1123679999999999987543
No 135
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=39.09 E-value=1.4e+02 Score=24.51 Aligned_cols=100 Identities=13% Similarity=0.094 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcC----CCc-----hhHHHHh-------HHHHHHHHHc-CCcCEEEcCCCCH---
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYG----QNA-----NETLLGK-------IGEMKKLVEE-GKIKYIGLSEASP--- 83 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg----~G~-----sE~~lG~-------~~~l~~l~~~-Gkir~iGvs~~~~--- 83 (263)
+.+...++++...+.|+..+...--|. .|. +++.+.. ++.+++++++ -.+--+.++-+++
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~ 109 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFA 109 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 678999999999999999887653332 231 2333322 6677777776 3556555554443
Q ss_pred ---HHHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCcee
Q 024724 84 ---DTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIV 125 (263)
Q Consensus 84 ---~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~ 125 (263)
+.+.+.+....++.+-++--++.. ..++.+.|+++|+.++
T Consensus 110 ~g~e~f~~~~~~aGvdgvii~Dlp~ee--~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 110 NGIDEFYTKAQAAGVDSVLIADVPVEE--SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HCHHHHHHHHHHHTCCEEEETTSCGGG--CHHHHHHHHHTTCEEE
T ss_pred hhHHHHHHHHHHcCCCEEEeCCCCHhh--HHHHHHHHHHcCCeEE
Confidence 333333333445544333222222 3678889999998754
No 136
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=38.92 E-value=1.1e+02 Score=26.53 Aligned_cols=67 Identities=10% Similarity=0.099 Sum_probs=47.7
Q ss_pred HHHHHHHHH-cCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeec
Q 024724 61 IGEMKKLVE-EGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 61 ~~~l~~l~~-~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~ 127 (263)
++.+.++++ .-.|-=.+- +-++...++++++....+++|+..+-.-- ..-.++...|+++|+.++..
T Consensus 235 ~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 235 LAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 777888887 555443333 33578889999988888899886554321 11267899999999998866
No 137
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=38.88 E-value=50 Score=28.86 Aligned_cols=96 Identities=11% Similarity=0.180 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+=.- - .++.+.+++++-.+- +.|=+-++...++++++...++++|+..
T Consensus 224 ~~~~A~~~~~~l~~~~i~~iEqP~----------~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~ 292 (398)
T 4dye_A 224 SVPDSVRAGIALEELDLEYLEDPC----------V-GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDV 292 (398)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCS----------S-HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHHHhhcCCCEEcCCC----------C-CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCc
Confidence 344555555444445555554110 0 267788887764443 3444567888889998888889999875
Q ss_pred CCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 103 SLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 103 n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
+-+-- ..-.++...|+++|+.++..+..
T Consensus 293 ~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 321 (398)
T 4dye_A 293 YKWGGIAATKALAAHCETFGLGMNLHSGG 321 (398)
T ss_dssp HHHTSHHHHHHHHHHHHHHTCEEEECCSC
T ss_pred cccCCHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 54321 11367999999999999987643
No 138
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=38.55 E-value=1.8e+02 Score=24.71 Aligned_cols=73 Identities=8% Similarity=0.089 Sum_probs=53.4
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+++++-.|- ..|=+-++...++++++...++++|+..+-+-- ..-.++...|+++|+.++..+.+.++
T Consensus 228 ~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1chr_A 228 TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECCSCCTT
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecCCCccH
Confidence 77788888765443 334455788899999998889999997765431 12368999999999999876665544
No 139
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=38.51 E-value=34 Score=22.18 Aligned_cols=32 Identities=9% Similarity=-0.004 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCC
Q 024724 163 RNKNIYFRIENLAKKYKCTSAQLALAWVLGQG 194 (263)
Q Consensus 163 ~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~ 194 (263)
.......+|+++.++.|+|..++|-+--++..
T Consensus 15 ~~~~~~~~l~~~r~~~glsq~elA~~~gis~~ 46 (83)
T 2a6c_A 15 MRSQLLIVLQEHLRNSGLTQFKAAELLGVTQP 46 (83)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHTSCHH
T ss_pred ccHHHHHHHHHHHHHcCCCHHHHHHHHCcCHH
Confidence 34455678889999999999999877655544
No 140
>1zs4_A Regulatory protein CII; helix-turn-helix, transcription activator, transcription-DNA; HET: DNA; 1.70A {Enterobacteria phage lambda} SCOP: a.35.1.9
Probab=37.59 E-value=88 Score=20.88 Aligned_cols=47 Identities=15% Similarity=0.270 Sum_probs=37.0
Q ss_pred HHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHh
Q 024724 172 ENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDA 231 (263)
Q Consensus 172 ~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~ 231 (263)
..+|+..|++.+++. ||--. ..+++-..++++++..-++++.++.+-
T Consensus 28 ~~vAe~~GvdeStIS-R~k~~------------~~~~~~~lLa~Lglkvv~~e~~~~~k~ 74 (83)
T 1zs4_A 28 EKTAEAVGVDKSQIS-RWKRD------------WIPKFSMLLAVLEWGVVDDDMARLARQ 74 (83)
T ss_dssp HHHHHHHTSCHHHHH-HHHHH------------THHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHh-hhhhh------------HHHHHHHHHHHhccCCCcHHHHHHHHH
Confidence 467888999999987 76542 156888888999998888898888764
No 141
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=37.56 E-value=99 Score=27.09 Aligned_cols=70 Identities=7% Similarity=-0.129 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCcCEE-EcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIKYI-GLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.+++++-.|-=. |=+-++...++++++...++++|+..+-+-- ..-.++...|+.+|+.++..+++
T Consensus 260 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 260 QEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp GGGGHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 4557777776555432 3344677888888888888999987765421 12367999999999999887774
No 142
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=37.18 E-value=1.2e+02 Score=26.17 Aligned_cols=69 Identities=12% Similarity=0.073 Sum_probs=49.4
Q ss_pred HHHHHHHHHcCCcCEE-EcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEEGKIKYI-GLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.+++++-.|-=. |=+-++...++++++...++++|+..+-+-- ..-.++...|+.+|+.++..+.
T Consensus 241 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 241 LIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp HHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeccCC
Confidence 6678888876555433 3344677888888888888999987765421 1236799999999999986553
No 143
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=37.00 E-value=84 Score=26.93 Aligned_cols=72 Identities=10% Similarity=0.105 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.++.++-.+- +.|=|-++...++++++...++++|+..+- -- ..-.++...|+++|+.++..+.+.++
T Consensus 229 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~~A~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 229 WAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 66778887764443 445566788899998888888999987654 11 11267899999999999987766544
No 144
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=36.75 E-value=12 Score=25.14 Aligned_cols=25 Identities=28% Similarity=0.357 Sum_probs=23.0
Q ss_pred hhhHHHHHHhCCceeecccCcCccc
Q 024724 111 EEIIPLCRELGIGIVPYSPLGRGFF 135 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~l~~G~L 135 (263)
..+++.++++||.++-.-||++-+.
T Consensus 30 ~~I~~~A~e~~VPi~e~~~LAr~L~ 54 (83)
T 3bzy_B 30 LQIIKLAELYDIPVIEDIPLARSLD 54 (83)
T ss_dssp HHHHHHHHHTTCCEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEeCHHHHHHHH
Confidence 6799999999999999999998776
No 145
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=36.66 E-value=1.7e+02 Score=23.77 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=24.2
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccC
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTAD 47 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~ 47 (263)
+||+-++.++..|. .....+ ++.+-+.|+..++...
T Consensus 22 klg~~~~~~~~~~~----~~~l~~-l~~~~~~G~~~vEl~~ 57 (309)
T 2hk0_A 22 KHGIYYSYWEHEWS----AKFGPY-IEKVAKLGFDIIEVAA 57 (309)
T ss_dssp EEEEEGGGGCSCTT----SCSHHH-HHHHHHTTCSEEEEEH
T ss_pred eeEEehhhcccccc----cccHHH-HHHHHHhCCCEEEecc
Confidence 57777777643332 123456 8888899999999763
No 146
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=36.60 E-value=1.2e+02 Score=26.71 Aligned_cols=70 Identities=9% Similarity=-0.078 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCcCE-EEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIKY-IGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.+++++-.|-= .|=+-++...++++++...++++|+..+-+-- ..-.++...|+.+|+.++..++.
T Consensus 266 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 266 QESFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp TTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred HHHHHHHHhhCCCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 556777777655542 33345677888888888888999987765421 12367999999999999887774
No 147
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=36.23 E-value=71 Score=25.11 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=26.9
Q ss_pred CCcCEEEcC-CCCHHHHHHHhcCCCceEEeccC
Q 024724 71 GKIKYIGLS-EASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 71 Gkir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
..+..+||. |.+.+.+.++++...++++|++-
T Consensus 52 ~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG 84 (205)
T 1nsj_A 52 PFVFRVGVFVNEEPEKILDVASYVQLNAVQLHG 84 (205)
T ss_dssp SSSEEEEEESSCCHHHHHHHHHHHTCSEEEECS
T ss_pred CCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECC
Confidence 568899984 67889999999989999999863
No 148
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=35.96 E-value=13 Score=25.79 Aligned_cols=25 Identities=16% Similarity=0.375 Sum_probs=23.0
Q ss_pred hhhHHHHHHhCCceeecccCcCccc
Q 024724 111 EEIIPLCRELGIGIVPYSPLGRGFF 135 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~l~~G~L 135 (263)
..+++.++++||.++-.-||++-+.
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr~Ly 54 (98)
T 3c01_E 30 LAVRAYAEKVGVPVIVDIKLARSLF 54 (98)
T ss_dssp HHHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCeecCHHHHHHHH
Confidence 6799999999999999999998776
No 149
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=35.90 E-value=1.4e+02 Score=24.87 Aligned_cols=89 Identities=10% Similarity=0.079 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCC-chhHHHHhHHHHHHHHHc-C-C--cCEEE-cCCCCHHHHHHHhcCCCceE
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQN-ANETLLGKIGEMKKLVEE-G-K--IKYIG-LSEASPDTIRRAHGVHPITA 97 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G-~sE~~lG~~~~l~~l~~~-G-k--ir~iG-vs~~~~~~l~~~~~~~~~~~ 97 (263)
+.++..++.+.|.++|..|+=|+.-|+.+ -+.+ ..+.|.+.++. | + |+.-| + .+.++..++++..-
T Consensus 186 t~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~e---dv~lmr~~v~~~g~~v~VKAAGGI--rt~edAl~mi~aGA--- 257 (288)
T 3oa3_A 186 TADEIIAGCVLSSLAGADYVKTSTGFNGPGASIE---NVSLMSAVCDSLQSETRVKASGGI--RTIEDCVKMVRAGA--- 257 (288)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHH---HHHHHHHHHHHSSSCCEEEEESSC--CSHHHHHHHHHTTC---
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHH---HHHHHHHHHHHhCCCceEEEeCCC--CCHHHHHHHHHcCC---
Confidence 67888899999999999999999666532 2211 24556666642 2 2 23332 2 24566666665421
Q ss_pred EeccCCCcccchhhhhHHHHHHhCCcee
Q 024724 98 VQMEWSLWTRDIEEEIIPLCRELGIGIV 125 (263)
Q Consensus 98 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~ 125 (263)
+-+-.+....+++.++.+|++..
T Consensus 258 -----~RiGtS~g~~I~~~~~~~~~~~~ 280 (288)
T 3oa3_A 258 -----ERLGASAGVKIVNETRLGNRQVD 280 (288)
T ss_dssp -----SEEEESCHHHHHHHHTC------
T ss_pred -----ceeehhhHHHHHHHHHhcCCCCC
Confidence 00111123456666666666543
No 150
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=35.80 E-value=38 Score=21.58 Aligned_cols=54 Identities=13% Similarity=0.055 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCC--cHHHHHHhhhccCC
Q 024724 165 KNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTT--KIKNLDDNIDSLRI 218 (263)
Q Consensus 165 ~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~--~~~~l~enl~a~~~ 218 (263)
......++.+.++.|+|..++|-+--+++..+.-..-|-+ +.+.+....++++.
T Consensus 11 ~~l~~~l~~~r~~~gltq~~lA~~~gvs~~~is~~e~g~~~~~~~~~~~ia~~l~v 66 (80)
T 3kz3_A 11 RRLKAIWEKKKNELGLSYESVADKMGMGQSAVAALFNGINALNAYNAALLAKILKV 66 (80)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCC
Confidence 3444566677777788877777665554443333333322 33445555555443
No 151
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=35.78 E-value=74 Score=27.15 Aligned_cols=44 Identities=20% Similarity=0.247 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCC------CHHHHHHHHhhcCCCceeeccCCCcHHHHHHhh
Q 024724 169 FRIENLAKKYKC------TSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNI 213 (263)
Q Consensus 169 ~~l~~ia~~~g~------s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl 213 (263)
.+|.++|++.|. +..++-..|+-... ...+..|+|+|+.|-+.+
T Consensus 241 ~rL~eia~~~g~~ty~Ie~~~el~~~wl~g~~-~VGITAGASTP~~lieeV 290 (328)
T 3szu_A 241 NRLAELAQRMGKRAFLIDDAKDIQEEWVKEVK-CVGVTAGASAPDILVQNV 290 (328)
T ss_dssp HHHHHHHHHTTCEEEEESSGGGCCHHHHTTCS-EEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCChHHCCHHHhCCCC-EEEEeecCCCCHHHHHHH
Confidence 589999999885 67888889985433 477889999998775544
No 152
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=35.68 E-value=2.1e+02 Score=24.87 Aligned_cols=69 Identities=13% Similarity=0.126 Sum_probs=50.7
Q ss_pred HHHHHHHHHcCCcCEE-EcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEEGKIKYI-GLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.+++++-.|-=. |=+-++...++++++...++++|+..+-+- -..-.++...|+.+|+.++..+.
T Consensus 218 ~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 218 AETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp THHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred HHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 5678888877555433 335578889999998888999998776542 11236899999999999887654
No 153
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=35.66 E-value=1.7e+02 Score=23.49 Aligned_cols=36 Identities=19% Similarity=0.157 Sum_probs=24.2
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCc
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVY 49 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Y 49 (263)
++|+=+|.+.. .....+.++.+-+.|+..++....+
T Consensus 18 ~~gi~~~~~~~-------~~~~~~~l~~~~~~G~~~iEl~~~~ 53 (295)
T 3cqj_A 18 PLGIYEKALPA-------GECWLERLQLAKTLGFDFVEMSVDE 53 (295)
T ss_dssp CEEEEGGGSCC-------CSCHHHHHHHHHHTTCSEEEEECCS
T ss_pred cceeeeecCCC-------CCCHHHHHHHHHhcCCCEEEEecCC
Confidence 45666666531 1246677888889999999986443
No 154
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=35.63 E-value=1.3e+02 Score=23.64 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=25.1
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCC
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADV 48 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~ 48 (263)
+||+-++.+.. ....+.++.+-+.|++.++....
T Consensus 19 klg~~~~~~~~--------~~~~~~l~~~~~~G~~~vEl~~~ 52 (257)
T 3lmz_A 19 HLGMAGYTFVN--------FDLDTTLKTLERLDIHYLCIKDF 52 (257)
T ss_dssp EEEECGGGGTT--------SCHHHHHHHHHHTTCCEEEECTT
T ss_pred EEEEEEEeecC--------CCHHHHHHHHHHhCCCEEEEecc
Confidence 56676776632 24677888999999999998754
No 155
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=34.43 E-value=1.3e+02 Score=25.79 Aligned_cols=69 Identities=14% Similarity=0.038 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.+++++-.|- ..|=+-++...++++++...++++|+..+-+-- ..-.++...|+.+|+.++..+.
T Consensus 234 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 234 LISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 67788888765443 333345678888889888888999987765421 1236899999999999987665
No 156
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=34.31 E-value=2.3e+02 Score=24.54 Aligned_cols=68 Identities=13% Similarity=0.055 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCCcCEE-EcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecc
Q 024724 61 IGEMKKLVEEGKIKYI-GLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
++.+.+++++-.|-=. |=+-++...++++++...++++|+..+-.- -..-.++...|+.+|+.+....
T Consensus 248 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~~ia~~A~~~gi~~~~h~ 317 (404)
T 4e5t_A 248 PEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAMAECHSAQIAPHL 317 (404)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 6778888877555433 334567788889988888899998776542 1223689999999999987654
No 157
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=34.27 E-value=1.3e+02 Score=25.52 Aligned_cols=72 Identities=11% Similarity=-0.018 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCCcCEEE-cCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcC
Q 024724 61 IGEMKKLVEEGKIKYIG-LSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGR 132 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~ 132 (263)
++.+.+++++-.|-=.+ =+-++...++++++....+++|+..+-.-- ..-.++...|+++|+.++..+.+..
T Consensus 222 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 295 (368)
T 1sjd_A 222 VLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMIET 295 (368)
T ss_dssp HHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCC
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeCCcccc
Confidence 77788888765444333 244688899999988888999997665421 1136899999999999665554443
No 158
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=33.93 E-value=1.2e+02 Score=24.64 Aligned_cols=88 Identities=10% Similarity=0.157 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchh-HHHHhHHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC---CCceEEe
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANE-TLLGKIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV---HPITAVQ 99 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE-~~lG~~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~---~~~~~~q 99 (263)
+.+...++++...+.|...+.-.--|..--.+ ..|. ++-.+..+.|. +...+.++++. .-+-+++
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq--~a~~rAL~~g~---------~~~~~~~~~~~~r~~~Pivlm 94 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIA--DAAKIALDQGV---------DIHSVFELLARIKTKKALVFM 94 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHH--HHHHHHHHTTC---------CHHHHHHHHHHCCCSSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHH--HHHHHHHHCCC---------CHHHHHHHHHHHhcCCCEEEE
Confidence 78899999999999999999875444321111 2222 22333333332 33333332221 1234667
Q ss_pred ccCCCcccchhhhhHHHHHHhCC
Q 024724 100 MEWSLWTRDIEEEIIPLCRELGI 122 (263)
Q Consensus 100 ~~~n~~~~~~~~~~~~~~~~~gi 122 (263)
.-||++.+.-.+.+++.|++.|+
T Consensus 95 ~Y~N~i~~~G~e~F~~~~~~aGv 117 (252)
T 3tha_A 95 VYYNLIFSYGLEKFVKKAKSLGI 117 (252)
T ss_dssp CCHHHHHHHCHHHHHHHHHHTTE
T ss_pred eccCHHHHhhHHHHHHHHHHcCC
Confidence 77777666434567777777776
No 159
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=33.78 E-value=2.2e+02 Score=24.25 Aligned_cols=68 Identities=15% Similarity=0.131 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~ 128 (263)
++.+.+++++-.+- ..|=+-++...++++++...++++|+..+-+-- ..-.++...|+++|+.++..+
T Consensus 237 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 237 VTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 77788887764443 334456788888889888888999887665321 113679999999999987654
No 160
>1y14_A B32, RPB4, DNA-directed RNA polymerase II 32 kDa polypeptide; transferase; 2.30A {Saccharomyces cerevisiae} SCOP: a.60.8.2
Probab=33.75 E-value=57 Score=25.42 Aligned_cols=59 Identities=15% Similarity=0.089 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCC
Q 024724 167 IYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIE 235 (263)
Q Consensus 167 ~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 235 (263)
.+..+.+...+++++..++|. .+=..+.+++.++..+.....+++++++..|-..+..+
T Consensus 125 sa~elre~L~~~kL~efE~aq----------LaNL~PeTadEaraLIpSle~rlsdEeLeeILd~L~k~ 183 (187)
T 1y14_A 125 TVGAVIQLLKSTGLHPFEVAQ----------LGSLACDTADEAKTLIPSLNNKISDDELERILKELSNL 183 (187)
T ss_dssp HHHHHHHHHHTTTCCHHHHHH----------HHHSCCSSHHHHHHHSGGGTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHH----------cCcCCCCCHHHHHHHHHhhccCCCHHHHHHHHHHHHHh
Confidence 344555555668888887763 22234567899999998888889999998887766543
No 161
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=33.70 E-value=1.9e+02 Score=24.89 Aligned_cols=97 Identities=9% Similarity=-0.012 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-.-. .+ .++.+.+++++-.|- ..|=+-++...++++++...++++|+..
T Consensus 225 ~~~~A~~~~~~l~~~~i~~iEeP~~-----~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 225 DPAEATRRIARLADYDLTWIEEPVP-----QE----NLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSC-----TT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred CHHHHHHHHHHHHhhCCCEEECCCC-----cc----hHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 4455555555444455555542110 00 166778888765443 3444567788899998888889999876
Q ss_pred CCccc-chhhhhHHHHHHhCCceeeccc
Q 024724 103 SLWTR-DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 103 n~~~~-~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
+-+-- ..-.++...|+++|+.++..+.
T Consensus 296 ~~~GGit~~~~ia~~A~~~gi~~~~h~~ 323 (383)
T 3toy_A 296 MKVGGITGWLNVAGQADAASIPMSSHIL 323 (383)
T ss_dssp TTTTHHHHHHHHHHHHHHHTCCBCCCSC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEeecCH
Confidence 65421 1236899999999999876443
No 162
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=33.62 E-value=57 Score=18.24 Aligned_cols=24 Identities=8% Similarity=0.246 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHH
Q 024724 165 KNIYFRIENLAKKYKCTSAQLALA 188 (263)
Q Consensus 165 ~~~~~~l~~ia~~~g~s~~q~al~ 188 (263)
.+..+.|.++|++.|+|.+++.-.
T Consensus 11 ~~l~~~Ld~~a~~~g~srS~~ir~ 34 (45)
T 2cpg_A 11 ESVLENLEKMAREMGLSKSAMISV 34 (45)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHH
Confidence 345689999999999998776543
No 163
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=33.45 E-value=1.8e+02 Score=25.45 Aligned_cols=96 Identities=9% Similarity=0.044 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-.- . .+ .++.+.+++++-.|- ..|=+-++...++++++...++++|+..
T Consensus 242 ~~~~Ai~~~~~Le~~~i~~iEeP~--~---~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~ 312 (412)
T 3stp_A 242 NLDYAKRMLPKLAPYEPRWLEEPV--I---AD----DVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDT 312 (412)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCS--C---TT----CHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCC--C---cc----cHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecCh
Confidence 556666666655556666665321 1 11 267788888875554 3334557889999999988899999866
Q ss_pred CCcc-cchhhhhHHHHHHhCCceeecc
Q 024724 103 SLWT-RDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 103 n~~~-~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
+-+- -..-.++...|+.+|+.++..+
T Consensus 313 ~~~GGit~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 313 NRVGGITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHTHHHHHHHHHHHHHHHTCCBCCSS
T ss_pred hhcCCHHHHHHHHHHHHHcCCEEEecc
Confidence 5432 1113678999999999988765
No 164
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=33.24 E-value=1.1e+02 Score=26.78 Aligned_cols=70 Identities=6% Similarity=-0.121 Sum_probs=49.5
Q ss_pred HHHHHHHHHcCCcCE-EEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIKY-IGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.++++.-.|-= .|=+-++...++++++...++++|+..+-+-- ..-.++...|+++|+.++..+..
T Consensus 267 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 267 QAGFRLIRQHTTTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp TTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred HHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 556777777655543 23345677888888888888999987765421 12367999999999998877664
No 165
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=33.20 E-value=1.7e+02 Score=25.26 Aligned_cols=70 Identities=11% Similarity=0.117 Sum_probs=50.4
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.++++.-.|- ..|=+-++...++++++...++++|+..+-+-- ..-.++...|+.+|+.++..++.
T Consensus 241 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 241 TEWLDNIRSQSSVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp GGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred HHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 55677777765443 333455788999999998889999987665321 12367999999999998877663
No 166
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=33.14 E-value=10 Score=26.16 Aligned_cols=25 Identities=24% Similarity=0.337 Sum_probs=23.0
Q ss_pred hhhHHHHHHhCCceeecccCcCccc
Q 024724 111 EEIIPLCRELGIGIVPYSPLGRGFF 135 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~l~~G~L 135 (263)
..+++.++++||.++-.-||++-+.
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr~Ly 54 (93)
T 2vt1_B 30 LAVRKYANEVGIPTVRDVKLARKLY 54 (93)
T ss_dssp HHHHHHHHHTTCCEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEECHHHHHHHH
Confidence 6799999999999999999998776
No 167
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=33.03 E-value=29 Score=26.59 Aligned_cols=28 Identities=29% Similarity=0.332 Sum_probs=23.6
Q ss_pred cchhhhHHHHHHHHHHHHHcCCCHHHHH
Q 024724 159 ENLDRNKNIYFRIENLAKKYKCTSAQLA 186 (263)
Q Consensus 159 ~~~~~~~~~~~~l~~ia~~~g~s~~q~a 186 (263)
.......+++..+..+++|||.|+.++.
T Consensus 122 ~rL~~ie~RL~~l~~L~RKyg~~~eell 149 (175)
T 4abx_A 122 EALDRVEARLSALSKLKNKYGPTLEDVV 149 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 3456788899999999999999998864
No 168
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=32.76 E-value=1.2e+02 Score=24.05 Aligned_cols=87 Identities=14% Similarity=0.229 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHc--CCcCEEEcCCCCHHHHHHHhcCCCceEEecc
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEE--GKIKYIGLSEASPDTIRRAHGVHPITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~--Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 101 (263)
+.+++.++++.+++.|++.+.-...-. . ..+.+++++++ ..+...|. -.+.++++.+++.. -+.+..+
T Consensus 27 ~~~~~~~~~~al~~gGv~~iel~~k~~-----~---~~~~i~~l~~~~~~l~vgaGt-vl~~d~~~~A~~aG-Ad~v~~p 96 (224)
T 1vhc_A 27 NADDILPLADTLAKNGLSVAEITFRSE-----A---AADAIRLLRANRPDFLIAAGT-VLTAEQVVLAKSSG-ADFVVTP 96 (224)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTST-----T---HHHHHHHHHHHCTTCEEEEES-CCSHHHHHHHHHHT-CSEEECS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCc-----h---HHHHHHHHHHhCcCcEEeeCc-EeeHHHHHHHHHCC-CCEEEEC
Confidence 678899999999999999998653211 1 12344444443 35545554 44778887777652 1233211
Q ss_pred CCCcccchhhhhHHHHHHhCCceee
Q 024724 102 WSLWTRDIEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 102 ~n~~~~~~~~~~~~~~~~~gi~v~a 126 (263)
....++++.|++.|+.++.
T Consensus 97 ------~~d~~v~~~ar~~g~~~i~ 115 (224)
T 1vhc_A 97 ------GLNPKIVKLCQDLNFPITP 115 (224)
T ss_dssp ------SCCHHHHHHHHHTTCCEEC
T ss_pred ------CCCHHHHHHHHHhCCCEEe
Confidence 1135788999999988765
No 169
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=32.68 E-value=1.6e+02 Score=22.83 Aligned_cols=87 Identities=18% Similarity=0.226 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceEEeccCC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAVQMEWS 103 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n 103 (263)
+.+++.++++.+++.|++.+.-...- . ...+.++++++..++...|+ -.+.++++.+++.. -+.+...
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~k~-----~---~~~~~i~~~~~~~~~~gag~-vl~~d~~~~A~~~G-Ad~v~~~-- 90 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITLRT-----E---KGLEALKALRKSGLLLGAGT-VRSPKEAEAALEAG-AAFLVSP-- 90 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEECSS-----T---HHHHHHHHHTTSSCEEEEES-CCSHHHHHHHHHHT-CSEEEES--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCC-----h---HHHHHHHHHhCCCCEEEeCe-EeeHHHHHHHHHcC-CCEEEcC--
Confidence 55678899999999999999854221 1 11234445555556666676 45778887776652 2233222
Q ss_pred CcccchhhhhHHHHHHhCCceee
Q 024724 104 LWTRDIEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 104 ~~~~~~~~~~~~~~~~~gi~v~a 126 (263)
....++.+.|++.|+.++.
T Consensus 91 ----~~d~~v~~~~~~~g~~~i~ 109 (207)
T 2yw3_A 91 ----GLLEEVAALAQARGVPYLP 109 (207)
T ss_dssp ----SCCHHHHHHHHHHTCCEEE
T ss_pred ----CCCHHHHHHHHHhCCCEEe
Confidence 1135788889999987664
No 170
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=32.26 E-value=1.1e+02 Score=26.65 Aligned_cols=70 Identities=10% Similarity=0.020 Sum_probs=49.4
Q ss_pred HHHHHHHHHc-----CCc-CEEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEE-----GKI-KYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~-----Gki-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.+|.++ -.| -..|=+.++...++++++..-++++|+..+-+-- ..-.++...|+++|+.++..+..
T Consensus 285 ~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 285 IRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTC 361 (413)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCT
T ss_pred HHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 4556666664 222 2334456788999999988888999987665322 12368999999999999887664
No 171
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=32.09 E-value=73 Score=27.72 Aligned_cols=68 Identities=12% Similarity=-0.102 Sum_probs=47.1
Q ss_pred HHHHHHHHHc------CCcCEEEcCCCCHHHHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEE------GKIKYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~------Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.+|++. +.--+.|=+-+ ...+.++++..-++++|+..+----..-..+...|+.+|+.++..++
T Consensus 240 ~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~d~~~GGitea~kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 240 EALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQYDIIWPGFTHWMELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECCBTTTBCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred HHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 5667777653 44445566666 66778888888889999987641111226789999999999987653
No 172
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=31.96 E-value=42 Score=18.96 Aligned_cols=17 Identities=29% Similarity=0.475 Sum_probs=12.2
Q ss_pred hhhccCCCCCHHHHHHH
Q 024724 212 NIDSLRIKLTKEDLKEI 228 (263)
Q Consensus 212 nl~a~~~~Lt~e~~~~i 228 (263)
-+...+.+||+|+++.|
T Consensus 15 ei~~RNrpltDEeLD~m 31 (39)
T 3lqv_P 15 EIDERNRPLSDEELDAM 31 (39)
T ss_dssp HHHHTTCCCCHHHHHHT
T ss_pred cchhhcCCCCHHHHHHh
Confidence 45566779999887654
No 173
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=31.84 E-value=1.8e+02 Score=24.71 Aligned_cols=92 Identities=11% Similarity=0.129 Sum_probs=54.9
Q ss_pred HHHHHHHHH-HcCCCeEecc-CCcCCC----chhHHHHhHHHHHHHHHc-CCcCEEEcC-----CCCHHHHHHHhcCC--
Q 024724 28 GISMIKHAF-SKGITFFDTA-DVYGQN----ANETLLGKIGEMKKLVEE-GKIKYIGLS-----EASPDTIRRAHGVH-- 93 (263)
Q Consensus 28 ~~~~l~~A~-~~Gi~~~DTA-~~Yg~G----~sE~~lG~~~~l~~l~~~-Gkir~iGvs-----~~~~~~l~~~~~~~-- 93 (263)
..+.-+..+ +.|..++|.- .+-.+| ..|+.. +.++.+++. +.. |-|- +++++.++++++..
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~---~~V~~v~~~~~vP--lsIDg~~~~T~~~eV~eaAleagag 156 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCV---ATVKEVLQAVGVP--LVVVGCGDVEKDHEVLEAVAEAAAG 156 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHH---HHHHHHHHHCCSC--EEEECCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHH---HHHHHHHhhCCce--EEEECCCCCCCCHHHHHHHHHhcCC
Confidence 455555556 8899999974 333333 223332 344555443 332 3344 45678888888764
Q ss_pred -CceEEeccCCCcccchhhhhHHHHHHhCCceeeccc
Q 024724 94 -PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 94 -~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
...++-+..- + ..++++.+.++|..++.+.|
T Consensus 157 ~~~lINsv~~~---~--~~~m~~laa~~g~~vVlmh~ 188 (323)
T 4djd_D 157 ENLLLGNAEQE---N--YKSLTAACMVHKHNIIARSP 188 (323)
T ss_dssp SCCEEEEEBTT---B--CHHHHHHHHHHTCEEEEECS
T ss_pred CCCeEEECCcc---c--HHHHHHHHHHhCCeEEEEcc
Confidence 2234433221 1 25799999999999999875
No 174
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=31.62 E-value=92 Score=26.54 Aligned_cols=101 Identities=9% Similarity=0.046 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCC-CceEEecc
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVH-PITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~-~~~~~q~~ 101 (263)
+.+++.++++..-+.|+.+|+-- .. .+ .++.+.+++++-.|- ..|=+-++...++++++.. .++++|+.
T Consensus 196 ~~~~a~~~~~~l~~~~i~~iEqP--~~---~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k 266 (356)
T 3ro6_B 196 DRDGLLRLDRLVQELGIEFIEQP--FP---AG----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIK 266 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCCEECC--SC---TT----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEECC--CC---CC----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEc
Confidence 45566666655555666666521 11 01 145566665543333 3344567888999999888 88999986
Q ss_pred CCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 102 WSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 102 ~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
.+-.-- ..-.++...|+++|+.++..+.+.++
T Consensus 267 ~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es~ 299 (356)
T 3ro6_B 267 LMKCGGLAPARRIATIAETAGIDLMWGCMDESR 299 (356)
T ss_dssp HHHHCSHHHHHHHHHHHHHHTCEEEECCCSCCH
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEEecCCcccH
Confidence 553221 11367899999999999876655443
No 175
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=31.05 E-value=2e+02 Score=22.94 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=26.5
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccC
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTAD 47 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~ 47 (263)
+||+-++.++..|.. ...+.++.+-+.|+..++...
T Consensus 3 kigi~~~~~~~~~~~-----~~~~~l~~~~~~G~~~vEl~~ 38 (294)
T 3vni_A 3 KHGIYYAYWEQEWEA-----DYKYYIEKVAKLGFDILEIAA 38 (294)
T ss_dssp CEEEEGGGGCSSSCC-----CHHHHHHHHHHHTCSEEEEES
T ss_pred eEEEehhhhcCCcCc-----CHHHHHHHHHHcCCCEEEecC
Confidence 567777777544332 467788889999999999764
No 176
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=30.87 E-value=2.5e+02 Score=24.00 Aligned_cols=91 Identities=11% Similarity=-0.006 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHH--cCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcC-CcCEEEc-CCCCHHHHHHHhcCCCceEEe
Q 024724 24 SEEDGISMIKHAFS--KGITFFDTADVYGQNANETLLGKIGEMKKLVEEG-KIKYIGL-SEASPDTIRRAHGVHPITAVQ 99 (263)
Q Consensus 24 ~~~~~~~~l~~A~~--~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~G-kir~iGv-s~~~~~~l~~~~~~~~~~~~q 99 (263)
+.+++.++++..-+ .|+.+|+-. .. . ..++.+.+++++- .|-=.+- +- +...++++++....+++|
T Consensus 202 ~~~~a~~~~~~l~~~g~~i~~iEqP--~~---~----~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ 271 (389)
T 2oz8_A 202 TSKEALTKLVAIREAGHDLLWVEDP--IL---R----HDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILN 271 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEESC--BC---T----TCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEE
T ss_pred CHHHHHHHHHHHHhcCCCceEEeCC--CC---C----cCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEE
Confidence 66788888877667 677777632 11 1 1366788888764 4443332 34 888999999988899999
Q ss_pred ccCCCcccchhhhhHHHHHHhCCceeec
Q 024724 100 MEWSLWTRDIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 100 ~~~n~~~~~~~~~~~~~~~~~gi~v~a~ 127 (263)
+. ---..-.++...|+++|+.++..
T Consensus 272 ik---GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 272 VH---GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp EC---SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred EC---cCHHHHHHHHHHHHHcCCeEeec
Confidence 98 11111267899999999999887
No 177
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=30.40 E-value=1.4e+02 Score=25.29 Aligned_cols=75 Identities=11% Similarity=0.119 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccC--CcCCC---chhHHHHhHHHHHHHHHcCCcCEEEcCCC-CHHHHHHHhcCCCceE
Q 024724 24 SEEDGISMIKHAFSKGITFFDTAD--VYGQN---ANETLLGKIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHGVHPITA 97 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~--~Yg~G---~sE~~lG~~~~l~~l~~~Gkir~iGvs~~-~~~~l~~~~~~~~~~~ 97 (263)
+.+++.++++..-+.|+.+|+.+. .+... ..+. . .++.+.++++.-.+--+++.+. +.+..+++++....|.
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~-~-~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~ 314 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPG-F-QVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADL 314 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTT-T-THHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCcc-c-cHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceE
Confidence 678889999999999999999863 22110 0010 0 1455666666545666777664 7888889988877787
Q ss_pred Eec
Q 024724 98 VQM 100 (263)
Q Consensus 98 ~q~ 100 (263)
+++
T Consensus 315 V~i 317 (349)
T 3hgj_A 315 VLL 317 (349)
T ss_dssp EEE
T ss_pred EEe
Confidence 776
No 178
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=30.36 E-value=2.6e+02 Score=24.04 Aligned_cols=96 Identities=10% Similarity=0.097 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
+.+++.++++..-+.|+.+|+-.- . .+. .++.+.+++++-.|- ..|=+-++...++++++...++++|+..
T Consensus 211 ~~~~A~~~~~~L~~~~i~~iEeP~--~---~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~ 282 (392)
T 3ddm_A 211 DLPRARQMAQRLGPAQLDWLEEPL--R---ADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDL 282 (392)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCS--C---TTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCT
T ss_pred CHHHHHHHHHHHHHhCCCEEECCC--C---ccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 667777777766677888887421 1 111 156677787764443 3344567889999998888899999876
Q ss_pred CCcc-cchhhhhHHHHHHhCCceeec
Q 024724 103 SLWT-RDIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 103 n~~~-~~~~~~~~~~~~~~gi~v~a~ 127 (263)
+-+- -..-.++...|+.+|+.++..
T Consensus 283 ~~~GGit~~~~ia~~A~~~gi~~~~h 308 (392)
T 3ddm_A 283 AKWGGFSGCLPVARAVVAAGLRYCPH 308 (392)
T ss_dssp TTTTHHHHHHHHHHHHHHTTCEECCE
T ss_pred chhCCHHHHHHHHHHHHHcCCEEEec
Confidence 5432 112368999999999998643
No 179
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=30.20 E-value=63 Score=28.04 Aligned_cols=98 Identities=11% Similarity=0.040 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHH-HHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEecc
Q 024724 24 SEEDGISMIKHA-FSKGITFFDTADVYGQNANETLLGKIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQME 101 (263)
Q Consensus 24 ~~~~~~~~l~~A-~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~ 101 (263)
+.+++.++++.. -+.++ +|+=. +-.++.+.+++++-.|. +.|=|-++...++++++...++++|+.
T Consensus 206 ~~~~A~~~~~~l~~~~~i-~iEeP-----------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k 273 (386)
T 3fv9_G 206 TVEHALRMLSLLPPGLDI-VLEAP-----------CASWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLK 273 (386)
T ss_dssp CHHHHHHHHHHSCSSCCC-EEECC-----------CSSHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEE
T ss_pred CHHHHHHHHHHhhccCCc-EEecC-----------CCCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEEC
Confidence 455555555544 34455 55421 11366777787765443 344466788899999988888999986
Q ss_pred CCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 102 WSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 102 ~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
.+-+- -..-.++...|+++|+.++..+.+.++
T Consensus 274 ~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 274 VSKQGGITPMLRQRAIAAAAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEEeCCCCCCH
Confidence 55432 111367899999999999876665544
No 180
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=30.19 E-value=65 Score=18.83 Aligned_cols=25 Identities=16% Similarity=0.066 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHH
Q 024724 165 KNIYFRIENLAKKYKCTSAQLALAW 189 (263)
Q Consensus 165 ~~~~~~l~~ia~~~g~s~~q~al~w 189 (263)
-+..+.|..+|++.|+|.+++.-..
T Consensus 18 ~el~~~l~~~a~~~g~s~s~~ir~a 42 (55)
T 2k9i_A 18 QEWHDRLMEIAKEKNLTLSDVCRLA 42 (55)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 4566899999999999988865443
No 181
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=36.14 E-value=11 Score=25.62 Aligned_cols=27 Identities=19% Similarity=0.445 Sum_probs=23.6
Q ss_pred hhhHHHHHHhCCceeecccCcCcccCC
Q 024724 111 EEIIPLCRELGIGIVPYSPLGRGFFGG 137 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~l~~G~L~~ 137 (263)
..+++.++++||.++-.-||++-+...
T Consensus 30 ~~I~e~A~e~~VPi~e~~~LAr~Ly~~ 56 (87)
T 3b1s_B 30 QKIVEIAENYSIPVVRKPELARALYPA 56 (87)
Confidence 578999999999999999999877633
No 182
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=29.89 E-value=1.2e+02 Score=26.26 Aligned_cols=72 Identities=11% Similarity=0.078 Sum_probs=53.3
Q ss_pred HHHHHHHHHcCCc-CEEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKI-KYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.++.++-.+ -+.|=|-++...++++++...++++|+..+. -- ..-.++...|+++|+.++..+.+.++
T Consensus 259 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~-GGit~~~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 259 EEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK-CGIVEALDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-cCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 5677788776444 3556677899999999988889999987654 21 11267899999999999987766544
No 183
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=29.56 E-value=2.5e+02 Score=23.46 Aligned_cols=187 Identities=10% Similarity=0.051 Sum_probs=0.0
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--------------------------
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK-------------------------- 60 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~-------------------------- 60 (263)
++..|+... +-+++.++.+.|-+.|+..+=...-|-...+++-+=+
T Consensus 95 pViaGvg~~--------~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l 166 (315)
T 3na8_A 95 PTIVSVSDL--------TTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDM 166 (315)
T ss_dssp CBEEECCCS--------SHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCC
T ss_pred cEEEecCCC--------CHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCC
Q ss_pred -HHHHHHH-HHcCCcCEEEcCCCCHHHHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCcCcccCCC
Q 024724 61 -IGEMKKL-VEEGKIKYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 138 (263)
Q Consensus 61 -~~~l~~l-~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~ 138 (263)
.+.+.+| .+-..|..|=-|+-+..++.++++..+- .|.++.-. +.-+++....=+-++++-..
T Consensus 167 ~~~~~~~L~a~~pnIvgiKdssgd~~~~~~~~~~~~~-----~f~v~~G~-D~~~l~~l~~G~~G~is~~a--------- 231 (315)
T 3na8_A 167 SVELILRIVREVDNVTMVKESTGDIQRMHKLRLLGEG-----RVPFYNGC-NPLALEAFVAGAKGWCSAAP--------- 231 (315)
T ss_dssp CHHHHHHHHHHSTTEEEEEECSSCHHHHHHHHHHTTT-----CSCEEECC-GGGHHHHHHHTCSEEEESGG---------
T ss_pred CHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHcCC-----CEEEEeCc-hHHHHHHHHCCCCEEEechh---------
Q ss_pred CcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCC
Q 024724 139 AVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRI 218 (263)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~ 218 (263)
.+-+..+......+...+.++..+...++..+.+-......-..+++.++.-++..--+ +.--.
T Consensus 232 ----n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~~~~~~~~~~K~al~~~G~~~g~~------------R~Pl~ 295 (315)
T 3na8_A 232 ----NLIPTLNGQLYQAVLDGDLEKARALFYRQLPLLDFILRRGLPTTIKAGLGLSGLEVGAP------------RLPVQ 295 (315)
T ss_dssp ----GTCHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTTCCCCCC------------CTTSC
T ss_pred ----hhCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHcCCCCCCc------------CCCCC
Q ss_pred CCCHHHHHHHHHhC
Q 024724 219 KLTKEDLKEISDAV 232 (263)
Q Consensus 219 ~Lt~e~~~~i~~~~ 232 (263)
+|++++.++|++++
T Consensus 296 ~l~~~~~~~l~~~l 309 (315)
T 3na8_A 296 ALDTEGCRYLQGLL 309 (315)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
No 184
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=29.47 E-value=2.6e+02 Score=23.70 Aligned_cols=72 Identities=11% Similarity=0.069 Sum_probs=48.8
Q ss_pred HHHHHHHHHcCCcCE-EEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcC
Q 024724 61 IGEMKKLVEEGKIKY-IGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGR 132 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~ 132 (263)
++.+.+++++-.|-= .|=+-++...++++++....+++|+..+-.-- ..-.++...|+++|+.++.-+.+.+
T Consensus 228 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (375)
T 1r0m_A 228 LVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGMLES 301 (375)
T ss_dssp SHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCC
T ss_pred HHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 667777776644432 23344688888888888888899987665421 1136899999999999665544443
No 185
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=29.22 E-value=2e+02 Score=24.77 Aligned_cols=69 Identities=13% Similarity=0.018 Sum_probs=49.3
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.+++++-.|. ..|=+-++...++++++...++++|+..+-+- -..-.++...|+++|+.+...+.
T Consensus 259 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~ 329 (390)
T 3ugv_A 259 FDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHLY 329 (390)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBSC
T ss_pred HHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCH
Confidence 66778888764443 44556678899999998888899988655431 11126799999999999876543
No 186
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=29.14 E-value=2.1e+02 Score=22.47 Aligned_cols=125 Identities=16% Similarity=0.179 Sum_probs=67.5
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEecc-CCcCCCchhHHHHhHHHHHHHHHcCCcCEEEcCCCCHHH
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFSKGITFFDTA-DVYGQNANETLLGKIGEMKKLVEEGKIKYIGLSEASPDT 85 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~~Gi~~~DTA-~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs~~~~~~ 85 (263)
+||+-++.+.. .....+.++.+-+.|+..++.. .... ... .+......
T Consensus 2 klg~~~~~~~~-------~~~~~~~l~~~~~~G~~~vEl~~~~~~----~~~--------------------~~~~~~~~ 50 (278)
T 1i60_A 2 KLCFNEATTLE-------NSNLKLDLELCEKHGYDYIEIRTMDKL----PEY--------------------LKDHSLDD 50 (278)
T ss_dssp EEEEEGGGGTT-------TCCHHHHHHHHHHTTCSEEEEETTTHH----HHH--------------------TTSSCHHH
T ss_pred eeEechhhccc-------CCCHHHHHHHHHHhCCCEEEEccHHHH----HHH--------------------hccCCHHH
Confidence 46666666321 1235677888889999999976 3211 000 01234555
Q ss_pred HHHHhcCCCceE--EeccCCCcccch---------hhhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCC
Q 024724 86 IRRAHGVHPITA--VQMEWSLWTRDI---------EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFP 154 (263)
Q Consensus 86 l~~~~~~~~~~~--~q~~~n~~~~~~---------~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~ 154 (263)
++++++...+.+ +...+++..... -...++.|++.|...+...|-.. +...+
T Consensus 51 ~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~--------~~~~~--------- 113 (278)
T 1i60_A 51 LAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVT--------EQKIV--------- 113 (278)
T ss_dssp HHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBC--------SSCCC---------
T ss_pred HHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCC--------CCCCC---------
Confidence 666665554432 333334331111 15788999999998887633110 00000
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHcCCC
Q 024724 155 RYKGENLDRNKNIYFRIENLAKKYKCT 181 (263)
Q Consensus 155 ~~~~~~~~~~~~~~~~l~~ia~~~g~s 181 (263)
.....+...+.++.+.++|+++|+.
T Consensus 114 --~~~~~~~~~~~l~~l~~~a~~~gv~ 138 (278)
T 1i60_A 114 --KEEIKKSSVDVLTELSDIAEPYGVK 138 (278)
T ss_dssp --HHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 0122345566777777888887763
No 187
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=28.96 E-value=2.1e+02 Score=24.79 Aligned_cols=70 Identities=9% Similarity=0.050 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccC
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.+.+++++-.+- ..|=+-++...++++++....+++|+..+-.-- ..-.++...|+.+|+.++..++.
T Consensus 250 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 321 (400)
T 4dxk_A 250 LSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAWHLPVAPHXCT 321 (400)
T ss_dssp GGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC-CC
T ss_pred HHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 55677777765554 333455678889999998889999998775421 12367999999999999876543
No 188
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=28.77 E-value=98 Score=27.06 Aligned_cols=71 Identities=13% Similarity=0.085 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLG 131 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~ 131 (263)
++.+.+|+++-.+. ..|=+-++...++++++..-++++|+..+-+-- ..-.++...|+.+|+.+...++..
T Consensus 261 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~~ 333 (421)
T 4hnl_A 261 SHWLTQLRSQSATPIATGELFNNPMEWQELVKNRQIDFMRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPSD 333 (421)
T ss_dssp GGGHHHHHTTCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSS
T ss_pred hHHHHHHHhcCCCCeecCcceehhHHHHHHHhcCCceEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCcc
Confidence 67788888765443 445566788889999988888999987664421 123678999999999998765543
No 189
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=28.77 E-value=1.3e+02 Score=26.29 Aligned_cols=68 Identities=13% Similarity=0.061 Sum_probs=47.7
Q ss_pred HHHHHHHHHc-----CCc-CEEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecc
Q 024724 61 IGEMKKLVEE-----GKI-KYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 61 ~~~l~~l~~~-----Gki-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~ 128 (263)
++.+.+|.++ -.| -..|=+-++...++++++..-++++|+..+-+-- ..-.++...|+++|+.++..+
T Consensus 285 ~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kcz_A 285 MEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 4556666665 222 2334456788999999988888999997775422 113689999999999998854
No 190
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=28.76 E-value=1.7e+02 Score=23.47 Aligned_cols=54 Identities=9% Similarity=-0.060 Sum_probs=26.7
Q ss_pred CEEEcCCC-----CHHHHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeecc
Q 024724 74 KYIGLSEA-----SPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 74 r~iGvs~~-----~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
..+|++.+ +.....+.+....++.+++....+... ..++.+.++++|+.+.+..
T Consensus 26 mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~-~~~~~~~l~~~gl~v~~~~ 84 (287)
T 3kws_A 26 LKLSFQEGIAPGESLNEKLDFMEKLGVVGFEPGGGGLAGR-VNEIKQALNGRNIKVSAIC 84 (287)
T ss_dssp CEEEEETTSSCCSSHHHHHHHHHHTTCCEEECBSTTCGGG-HHHHHHHHTTSSCEECEEE
T ss_pred eeEEEEecccCCCCHHHHHHHHHHcCCCEEEecCCchHHH-HHHHHHHHHHcCCeEEEEe
Confidence 35666553 233333333345556666544422211 2456666666777665443
No 191
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=28.74 E-value=2.8e+02 Score=23.87 Aligned_cols=69 Identities=14% Similarity=0.199 Sum_probs=48.8
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.++++.-.|. +.|=+-++...++++++...++++|+..+-.- -..-.++...|+.+|+.++..+.
T Consensus 239 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~a~kia~~A~~~gv~~~~h~~ 309 (388)
T 3tcs_A 239 LAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYLGGICRTLRVVEMARAAGLPVTPHCA 309 (388)
T ss_dssp HHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred HHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 67778887764443 44456678889999888888888988654321 11136899999999999886554
No 192
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=28.56 E-value=2.9e+02 Score=24.59 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCC--cCCCchhHHHHh--HHHHHHHHHc-CCcCEE---------EcCCCCHHHH---
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADV--YGQNANETLLGK--IGEMKKLVEE-GKIKYI---------GLSEASPDTI--- 86 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~--Yg~G~sE~~lG~--~~~l~~l~~~-Gkir~i---------Gvs~~~~~~l--- 86 (263)
+.++-.++++...+.|+..++...- |. .+-+++.. |+.++++++. ..++.. |.+++..+.+
T Consensus 28 ~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~--~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~ 105 (464)
T 2nx9_A 28 RIDDMLPIAQQLDQIGYWSLECWGGATFD--SCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTF 105 (464)
T ss_dssp CGGGTGGGHHHHHTSCCSEEEEEETTHHH--HHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcCcccc--chhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHH
Confidence 5667777887777889999998520 00 01122222 6677777664 233322 4445544333
Q ss_pred -HHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCc
Q 024724 87 -RRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLG 131 (263)
Q Consensus 87 -~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~ 131 (263)
+.+.+ ..++++.+..+.-+..--...+++++++|..+..+-...
T Consensus 106 v~~a~~-~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~ 150 (464)
T 2nx9_A 106 VERAVK-NGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYT 150 (464)
T ss_dssp HHHHHH-TTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred HHHHHh-CCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEee
Confidence 33333 445655554443332223678999999999876544333
No 193
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=28.51 E-value=2.7e+02 Score=23.50 Aligned_cols=99 Identities=14% Similarity=0.144 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCC-cCCC--c-hhHHHHh-HHHHHHHHHc--CCcCEEEcCCCCHHHHHHHhcCCCce
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADV-YGQN--A-NETLLGK-IGEMKKLVEE--GKIKYIGLSEASPDTIRRAHGVHPIT 96 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~-Yg~G--~-sE~~lG~-~~~l~~l~~~--Gkir~iGvs~~~~~~l~~~~~~~~~~ 96 (263)
+.+.+.+..++.++.|-..+|-... -.+| - .|+.+.+ ...++.++++ +. -|.|-+++++.++++++...--
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~v--pISIDT~~~~VaeaAl~aGa~i 140 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQ--LISVDTWRAQVAKAACAAGADL 140 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTC--EEEEECSCHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC--eEEEeCCCHHHHHHHHHhCCCE
Confidence 4466677777778899999997632 1233 1 1333443 3455666654 33 5788899999999999874322
Q ss_pred EEeccCCCcccchhhhhHHHHHHhCCceeeccc
Q 024724 97 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 97 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
+|- .|-.. ..++++.++++|..++.+..
T Consensus 141 IND--Vsg~~---d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 141 IND--TWGGV---DPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp EEE--TTSSS---STTHHHHHHHHTCEEEEECC
T ss_pred EEE--CCCCC---chHHHHHHHHhCCCEEEECC
Confidence 332 23222 35899999999999998763
No 194
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=28.43 E-value=56 Score=27.48 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=33.9
Q ss_pred HHHHHHHHHcCC------CHHHHHHHHhhcCCCceeeccCCCcHHHHHHhh
Q 024724 169 FRIENLAKKYKC------TSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNI 213 (263)
Q Consensus 169 ~~l~~ia~~~g~------s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl 213 (263)
.+|.++|++.|. +..++-..|+-... ...+-.|+|+|+.|-+.+
T Consensus 225 ~rL~eia~~~~~~ty~Ie~~~el~~~wl~~~~-~VGITAGASTP~~li~eV 274 (297)
T 3dnf_A 225 RRLYYISKELNPNTYHIETAEELQPEWFRGVK-RVGISAGASTPDWIIEQV 274 (297)
T ss_dssp HHHHHHHHHHCSSEEEESSGGGCCGGGGTTCS-EEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEeCChHHCCHHHhCCCC-EEEEeecCCCCHHHHHHH
Confidence 589999999875 57788888876433 477899999998876554
No 195
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=28.35 E-value=2.2e+02 Score=24.93 Aligned_cols=67 Identities=9% Similarity=0.127 Sum_probs=47.5
Q ss_pred HHHHHHHHHc-CCc-CEEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeec
Q 024724 61 IGEMKKLVEE-GKI-KYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 61 ~~~l~~l~~~-Gki-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~ 127 (263)
++.+.+++++ +.| -..|=+-++...++++++....+++|+..+-.-- ..-..+...|+++|+.++..
T Consensus 282 ~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 282 VLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 6677778776 223 2334456788999999988888999987665421 11267889999999998543
No 196
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=28.31 E-value=3.2e+02 Score=24.28 Aligned_cols=66 Identities=15% Similarity=0.186 Sum_probs=48.4
Q ss_pred HHHHHHHHHcC-CcCEEEc--CCCCHHHHHHHhcCCCceEEeccCCCcccc-hhhhhHHHHHHhCCceee
Q 024724 61 IGEMKKLVEEG-KIKYIGL--SEASPDTIRRAHGVHPITAVQMEWSLWTRD-IEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 61 ~~~l~~l~~~G-kir~iGv--s~~~~~~l~~~~~~~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a 126 (263)
|+.+.+|.++- +|--+|= ...++..++++++..-.+++|+..|-.--- .-.++...|+.+|+.++.
T Consensus 309 ~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 309 WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEE
Confidence 88888888764 4655663 334789999998888888888877743321 126788899999999775
No 197
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=28.27 E-value=1.5e+02 Score=25.32 Aligned_cols=73 Identities=18% Similarity=0.189 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccC-CcCCCchhHHHHhHHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceEEec
Q 024724 24 SEEDGISMIKHAFSKGITFFDTAD-VYGQNANETLLGKIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAVQM 100 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~-~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~ 100 (263)
+.+++.++++.+-+.|+.+++... .|..+.. ..++.+.++++.=.+--++...++.+..+++++....|.+++
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~----~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAGGKP----YSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC----CCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccCCCc----ccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEE
Confidence 556788888888899999999864 2211111 124566677776667777888888999999999888888876
No 198
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=28.21 E-value=29 Score=21.78 Aligned_cols=28 Identities=18% Similarity=0.076 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHhhcCC
Q 024724 167 IYFRIENLAKKYKCTSAQLALAWVLGQG 194 (263)
Q Consensus 167 ~~~~l~~ia~~~g~s~~q~al~w~l~~~ 194 (263)
....|+++.++.|+|..++|-+--++..
T Consensus 8 ~~~~l~~~r~~~g~sq~~lA~~~gis~~ 35 (78)
T 3b7h_A 8 VSEHLMELITQQNLTINRVATLAGLNQS 35 (78)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHH
Confidence 3457778888888888888866655444
No 199
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=28.15 E-value=3e+02 Score=23.94 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=19.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK 60 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~ 60 (263)
+.++..+.|+.|-+.|++.+=|+=.--.+..+..+.+
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~ 75 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAE 75 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC--------HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHH
Confidence 4556667788888888877767655443333444443
No 200
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=28.02 E-value=1.3e+02 Score=19.87 Aligned_cols=25 Identities=24% Similarity=0.092 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHhh
Q 024724 167 IYFRIENLAKKYKCTSAQLALAWVL 191 (263)
Q Consensus 167 ~~~~l~~ia~~~g~s~~q~al~w~l 191 (263)
.-.+|+.+|.+.|+|+.|++.-++.
T Consensus 12 qH~rLKalAa~qG~SInqli~E~lf 36 (83)
T 2an7_A 12 QHQSLKALAALQGKTIKQYALERLF 36 (83)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHTS
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHcc
Confidence 3468999999999999999988764
No 201
>4hv0_A AVTR; ribbon-helix-helix, DNA, transcription, viral protein; 2.60A {Acidianus filamentous virus 6}
Probab=27.64 E-value=80 Score=21.87 Aligned_cols=25 Identities=12% Similarity=0.081 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHhh
Q 024724 167 IYFRIENLAKKYKCTSAQLALAWVL 191 (263)
Q Consensus 167 ~~~~l~~ia~~~g~s~~q~al~w~l 191 (263)
..+.|+++|++.|+|+++++=..+.
T Consensus 9 lY~~LkelAe~EGvSvSav~RkLL~ 33 (106)
T 4hv0_A 9 VYEFLKKKAKEEGTSVPAVIRKILK 33 (106)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4578999999999999998865544
No 202
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=27.49 E-value=2.2e+02 Score=22.24 Aligned_cols=86 Identities=14% Similarity=0.242 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHc--CCcCEEEcCCCCHHHHHHHhcC-CCceEEec
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEE--GKIKYIGLSEASPDTIRRAHGV-HPITAVQM 100 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~--Gkir~iGvs~~~~~~l~~~~~~-~~~~~~q~ 100 (263)
+.+++.++++.+++.|++.+.-...-. .. .+.+++++++ ..+...|. -.+.++++.+++. ..+. ..
T Consensus 26 ~~~~~~~~~~al~~gGv~~iel~~k~~--~~------~~~i~~l~~~~~~~~vgagt-vi~~d~~~~A~~aGAd~v--~~ 94 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGVRVLNVTLRTE--CA------VDAIRAIAKEVPEAIVGAGT-VLNPQQLAEVTEAGAQFA--IS 94 (214)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEESCST--TH------HHHHHHHHHHCTTSEEEEES-CCSHHHHHHHHHHTCSCE--EE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCh--hH------HHHHHHHHHHCcCCEEeeCE-EEEHHHHHHHHHcCCCEE--Ec
Confidence 678899999999999999998653221 11 2344444443 35555565 4577888777665 2332 21
Q ss_pred cCCCcccchhhhhHHHHHHhCCceee
Q 024724 101 EWSLWTRDIEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 101 ~~n~~~~~~~~~~~~~~~~~gi~v~a 126 (263)
+ ....++.+.|+++|+.++.
T Consensus 95 p------~~d~~v~~~~~~~g~~~i~ 114 (214)
T 1wbh_A 95 P------GLTEPLLKAATEGTIPLIP 114 (214)
T ss_dssp S------SCCHHHHHHHHHSSSCEEE
T ss_pred C------CCCHHHHHHHHHhCCCEEE
Confidence 1 1135788999999988775
No 203
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=27.39 E-value=3e+02 Score=23.78 Aligned_cols=159 Identities=12% Similarity=0.073 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh-------------------------------------------
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK------------------------------------------- 60 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~------------------------------------------- 60 (263)
..++..+.|+.|-+.|++.+=|+=+...+..+..+.+
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl~~~~~lGi~ 94 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDELEPLIELGVT 94 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBCHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCC
Confidence 4556678888888888888877766554434433333
Q ss_pred ---------HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcC-CCceEEeccCCCcccc-------hhhhhHHHHHHhCCc
Q 024724 61 ---------IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGV-HPITAVQMEWSLWTRD-------IEEEIIPLCRELGIG 123 (263)
Q Consensus 61 ---------~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~n~~~~~-------~~~~~~~~~~~~gi~ 123 (263)
.+...+|-+. .--.+=.|+.+.+.+..+++. ..++-+..-.|.+-+. .-.+--.+.+++|+.
T Consensus 95 glRLD~Gf~~~eia~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~ 173 (372)
T 2p0o_A 95 GLRMDYGITIEQMAHASHK-IDIGLNASTITLEEVAELKAHQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKELGLQ 173 (372)
T ss_dssp EEEECSSCCHHHHHHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCCCCSTTCSBCHHHHHHHHHHHHHTTCE
T ss_pred EEEEcCCCCHHHHHHHhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCc
Confidence 3334444333 223444567777777777665 2332222223322221 113455666788999
Q ss_pred eeecccCcCcccCCCCcCCCCCC-CcccccCCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccC
Q 024724 124 IVPYSPLGRGFFGGKAVVESVPA-DSILHFFPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPG 202 (263)
Q Consensus 124 v~a~~~l~~G~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g 202 (263)
+.|+-|=-.+ ..|. ..+.+|. ..+ ++++|.. +...+...+.|.-|++|
T Consensus 174 t~AFI~g~~~-~rGP-l~eGLPTLE~H----------------------------R~~~~~~-~a~~L~~~~~iD~V~IG 222 (372)
T 2p0o_A 174 VFTFVPGDGQ-TRGP-IFAGLPTLEKH----------------------------RGQNPFA-AAVGLMADPYVDAVYIG 222 (372)
T ss_dssp EEEEECCSSS-CCTT-TCSCCCSBGGG----------------------------TTSCHHH-HHHHHHHSTTCCEEEEC
T ss_pred EEEEecCCCc-cCCC-ccCCCCchHHh----------------------------CCCCHHH-HHHHHHhcCCCCEEEEC
Confidence 9988664321 1222 1122222 111 1344443 55567778788999998
Q ss_pred CC--cHHHHHHhhh
Q 024724 203 TT--KIKNLDDNID 214 (263)
Q Consensus 203 ~~--~~~~l~enl~ 214 (263)
=. +.+.+++-..
T Consensus 223 d~~~S~~el~~l~~ 236 (372)
T 2p0o_A 223 DPTISERTMAQFGY 236 (372)
T ss_dssp SSCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
Confidence 64 5555555444
No 204
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=27.25 E-value=44 Score=25.20 Aligned_cols=28 Identities=25% Similarity=0.453 Sum_probs=20.8
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHH-cCCC
Q 024724 7 KLGLGCMNLSSGYSSPVSEEDGISMIKHAFS-KGIT 41 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~~~~~~~~~l~~A~~-~Gi~ 41 (263)
.+|+||-+ ..+.++..+.|+.+++ +|+.
T Consensus 12 vvGIGcrr-------g~~~~~i~~ai~~aL~~~gl~ 40 (155)
T 3by5_A 12 VAGIGCRK-------GAASDAIIAAVRAAERAFGVT 40 (155)
T ss_dssp EEEEEECS-------SCCHHHHHHHHHHHHHHHTCC
T ss_pred EEEEccCC-------CCCHHHHHHHHHHHHHHCCCC
Confidence 57888743 3478899999999984 5754
No 205
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=27.18 E-value=2.6e+02 Score=23.03 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEecc-CCcCCCchhHHHHh
Q 024724 24 SEEDGISMIKHAFSKGITFFDTA-DVYGQNANETLLGK 60 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA-~~Yg~G~sE~~lG~ 60 (263)
+-.++.++.+.|-+.|+..+=.. +.|.....|.++.-
T Consensus 88 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~ 125 (301)
T 3m5v_A 88 ATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEH 125 (301)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 66889999999999999876554 55554334444443
No 206
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=27.15 E-value=28 Score=31.43 Aligned_cols=23 Identities=17% Similarity=0.302 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHcCCCeEeccC
Q 024724 25 EEDGISMIKHAFSKGITFFDTAD 47 (263)
Q Consensus 25 ~~~~~~~l~~A~~~Gi~~~DTA~ 47 (263)
..+...+++.++++|++++|||.
T Consensus 93 ~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 93 GISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SSCHHHHHHHHHHHTCEEEESSC
T ss_pred cccCHHHHHHHHHcCCCEEECCC
Confidence 34678999999999999999994
No 207
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=27.15 E-value=1.7e+02 Score=24.10 Aligned_cols=58 Identities=19% Similarity=0.252 Sum_probs=36.7
Q ss_pred cccceeccccCCCC-CCCCCCHHHHHHHHHHHHHcCCCe-EeccCCcCCCchhHHHHhHHHHHHHHHcCCcC
Q 024724 5 VSKLGLGCMNLSSG-YSSPVSEEDGISMIKHAFSKGITF-FDTADVYGQNANETLLGKIGEMKKLVEEGKIK 74 (263)
Q Consensus 5 vs~lglGt~~~g~~-~~~~~~~~~~~~~l~~A~~~Gi~~-~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir 74 (263)
+-.|-+|++.|+.. |.+ +.+...++++...+.||.. |. .|. +|.+..+..|.++|.++
T Consensus 105 ~aSl~~gs~Nf~~~v~~N--~~~~~~~~~~~~~e~Gi~pE~e---~fd-------~g~l~~~~~l~~~Gl~~ 164 (275)
T 3no5_A 105 MASLATGSVNFPTRVYDN--PPELVDWLAAEMKTYGIKPEVE---AFD-------LSMIFQAAAMQAAGAIV 164 (275)
T ss_dssp EEEEECSCEECSSSEECC--CHHHHHHHHHHHHHTTCEEEEE---ESS-------THHHHHHHHHHHHTSSC
T ss_pred EEEecCcccccccccccC--CHHHHHHHHHHHHHcCCeeEEE---EEc-------HHHHHHHHHHHHCCCCC
Confidence 33466777777642 322 6778888888888888762 22 233 33345566788888875
No 208
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=27.02 E-value=2e+02 Score=25.99 Aligned_cols=106 Identities=11% Similarity=0.172 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEec-----cCCcCCCchhHHHHhHHHHHHHHHc-CCc--CEEEcCCCCHHHHHH----Hh
Q 024724 23 VSEEDGISMIKHAFSKGITFFDT-----ADVYGQNANETLLGKIGEMKKLVEE-GKI--KYIGLSEASPDTIRR----AH 90 (263)
Q Consensus 23 ~~~~~~~~~l~~A~~~Gi~~~DT-----A~~Yg~G~sE~~lG~~~~l~~l~~~-Gki--r~iGvs~~~~~~l~~----~~ 90 (263)
++.++.-+++...+.-|+.++-- ...|.+ -.|++.--.+++.+..++ |.. -+.-++.-+.+++.+ +.
T Consensus 189 Lsp~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p-~~eR~~~v~eai~rA~~eTGe~k~~~~NiTa~~~~eM~~Ra~~a~ 267 (493)
T 1bwv_A 189 LSGKNYGRVVYEALKGGLDFVKDDENINSQPFMR-WRERYLFTMEAVNKASAATGEVKGHYLNVTAATMEEMYARANFAK 267 (493)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCTTCSSBTTBC-HHHHHHHHHHHHHHHHHHHTSCCEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCcccCccccCCCCCCc-HHHHHHHHHHHHHHHHHhhCCcceeeccCCCCCHHHHHHHHHHHH
Confidence 47889999999999999999831 111221 134443236777776654 744 466777766666533 23
Q ss_pred cCCCceEEeccCCCcccchhhhhHHHHHHhCCceeecccCc
Q 024724 91 GVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLG 131 (263)
Q Consensus 91 ~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l~ 131 (263)
+ ....++++.|.. --.....+..+|++.++.+.+.-+..
T Consensus 268 e-~G~~~~mvd~~~-G~~a~~~l~~~~r~~~l~lh~HRAgh 306 (493)
T 1bwv_A 268 E-LGSVIIMIDLVI-GYTAIQTMAKWARDNDMILHLHRAGN 306 (493)
T ss_dssp H-TTCSEEEEEGGG-CHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred H-hCCCeEEEeccc-ChHHHHHHHHHHhhcCcEEEecCCCc
Confidence 3 344567777766 44445778889988999888876655
No 209
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=26.93 E-value=73 Score=22.07 Aligned_cols=26 Identities=8% Similarity=0.135 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhh
Q 024724 166 NIYFRIENLAKKYKCTSAQLALAWVL 191 (263)
Q Consensus 166 ~~~~~l~~ia~~~g~s~~q~al~w~l 191 (263)
+.++++.++|..|++++.+++-.|..
T Consensus 45 ~VldKc~ELC~~y~lda~e~VeeWmA 70 (101)
T 2keb_A 45 ALIEKLVELCVQYGQNEEGMVGELIA 70 (101)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 56789999999999999988877754
No 210
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=26.73 E-value=1.9e+02 Score=24.70 Aligned_cols=73 Identities=7% Similarity=-0.024 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+++++-.|. ..|=+-++...++++++....+++|+..+-+- -..-.++...|+++|+.++..+.+.+|
T Consensus 231 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es~ 305 (377)
T 3my9_A 231 LDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEGG 305 (377)
T ss_dssp HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCEECCSH
T ss_pred HHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecCCCCCcH
Confidence 67777777764443 33345567888888888777888887654322 111367889999999998765444443
No 211
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=26.66 E-value=1.7e+02 Score=25.19 Aligned_cols=67 Identities=9% Similarity=-0.103 Sum_probs=46.2
Q ss_pred HHHHHHHHHc-----CCcCEEEcCCCCHHHHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceeec
Q 024724 61 IGEMKKLVEE-----GKIKYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 61 ~~~l~~l~~~-----Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~ 127 (263)
++.+.++++. -.|-=.+---++...++++++....+++|+..+-.--..-.++...|+++|+.++..
T Consensus 240 ~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik~~~~Git~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 240 EALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYDIIWPGFTHWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCBTTTBCHHHHHHHHHHHHHTTCEECCB
T ss_pred HHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCCCEEEeCccccCHHHHHHHHHHHHHcCCEEEec
Confidence 5667777765 333322222456678888888888899999877651111268999999999998875
No 212
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=26.60 E-value=1.7e+02 Score=25.19 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=52.1
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.++.++-.|- +.|=+-++...++++++...++++|+..+-.-- ..-.++...|+++|+.++..+.+..|
T Consensus 241 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ 315 (393)
T 1wuf_A 241 FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCGGMLEAG 315 (393)
T ss_dssp SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 77888888764442 334455788899998888888899987765421 12367889999999999876665543
No 213
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=26.21 E-value=2.8e+02 Score=23.04 Aligned_cols=99 Identities=13% Similarity=0.191 Sum_probs=61.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCc-CCCc----hhHHHHh-HHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceE
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVY-GQNA----NETLLGK-IGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITA 97 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Y-g~G~----sE~~lG~-~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~ 97 (263)
+.+.+.+..+..++.|-..+|-.-.. .+|. .|+.+-+ ...++.+++++. -|.|-+++++.++++++...--+
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~iI 127 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAHLL 127 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCCEE
Confidence 44556666677778999999986422 2221 1233333 456666665533 47888999999999998743223
Q ss_pred EeccCCCcccchhhhhHHHHHHhCCceeeccc
Q 024724 98 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 98 ~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
| ..|-. . ..++++.++++|..++.+..
T Consensus 128 N--dVsg~-~--d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 128 N--DVTGL-R--DERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp E--CSSCS-C--CHHHHHHHHHHTCEEEEECC
T ss_pred E--ECCCC-C--ChHHHHHHHHhCCCEEEEcC
Confidence 3 23333 2 35899999999999998764
No 214
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=26.17 E-value=3.1e+02 Score=23.55 Aligned_cols=97 Identities=16% Similarity=0.142 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHHHHcCCC-eEeccCCcCCCchhHHHHhHHHHHHHHHcCCcCEEEcC--------------------CCC
Q 024724 24 SEEDGISMIKHAFSKGIT-FFDTADVYGQNANETLLGKIGEMKKLVEEGKIKYIGLS--------------------EAS 82 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~-~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs--------------------~~~ 82 (263)
+.+....+.+.+...|++ +++|.-.-. .|.+...++.+.++.+++.-+-+|+- ..+
T Consensus 76 ~~e~l~~~~~a~~~~GvTt~l~t~~T~~---~e~l~~al~~~~~~~~~~~~~ilGiHlEGPfis~~~~Ga~~~~~i~~p~ 152 (381)
T 3iv8_A 76 TAETIDTMHKANLKSGCTSFLPTLITSS---DENMRQAIAAAREYQAKYPNQSLGLHLEGPYLNVMKKGIHSVDFIRPSD 152 (381)
T ss_dssp SHHHHHHHHHHHHHTTEEEEEEEEESCC---HHHHHHHHHHHHHHHHHCSSSBCCEEEECSSCCGGGCTTSCTTTCCCCC
T ss_pred CHHHHHHHHHHHHhCCccccccccCCCC---HHHHHHHHHHHHHHHhcCCCceeEeeccCcccCHhhcCCCCHHHcCCCC
Confidence 667778888888899998 557764444 56666667777777777633334431 134
Q ss_pred HHHHHHHhcCCCceEEeccCCCcccchhhhhHHHHHHhCCceee
Q 024724 83 PDTIRRAHGVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 83 ~~~l~~~~~~~~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a 126 (263)
.+.++++.+.... +..+.+-+=.. ..+++++++++||.+-.
T Consensus 153 ~~~~~~~~~~~~~-i~~vTlAPE~~--~~~~i~~l~~~gi~vs~ 193 (381)
T 3iv8_A 153 DTMIDTICANSDV-IAKVTLAPENN--KPEHIEKLVKAGIVVSI 193 (381)
T ss_dssp HHHHHHHHHTTTS-EEEEEECCTTS--CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhccCC-eEEEEECCCCC--cHHHHHHHHHCCCEEEe
Confidence 5667777665432 33333333222 25789999999997654
No 215
>2glo_A Brinker CG9653-PA; protein-DNA complex, helix-turn-helix motif, transcription/DNA complex; NMR {Drosophila melanogaster}
Probab=25.55 E-value=77 Score=18.95 Aligned_cols=20 Identities=25% Similarity=0.433 Sum_probs=14.6
Q ss_pred HHHHHHHcCCCHHHHHHHHhh
Q 024724 171 IENLAKKYKCTSAQLALAWVL 191 (263)
Q Consensus 171 l~~ia~~~g~s~~q~al~w~l 191 (263)
+.++|.++|+++.. ..+|+.
T Consensus 28 ~~~vA~~~gIs~~t-l~~W~~ 47 (59)
T 2glo_A 28 QRATARKYNIHRRQ-IQKWLQ 47 (59)
T ss_dssp HHHHHHHTTSCHHH-HHHHHT
T ss_pred HHHHHHHHCcCHHH-HHHHHH
Confidence 77888888887755 457754
No 216
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=25.33 E-value=97 Score=26.58 Aligned_cols=73 Identities=7% Similarity=-0.103 Sum_probs=42.1
Q ss_pred HHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+++++-.|-=.+- +-++...++++++....+++|+.-+..- -..-.++...|+++|+.++..+.+..+
T Consensus 226 ~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~~~es~ 300 (378)
T 2qdd_A 226 LDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIEDVGGTA 300 (378)
T ss_dssp HHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecCCCCcH
Confidence 344455554433332222 2345666666666666677777554321 111257889999999999887554443
No 217
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=24.93 E-value=2.7e+02 Score=22.31 Aligned_cols=27 Identities=7% Similarity=0.030 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcC
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYG 50 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg 50 (263)
++++...+.+.|.++|..|+=|+.-|+
T Consensus 146 ~~e~i~~a~ria~eaGADfVKTsTG~~ 172 (234)
T 1n7k_A 146 DDKTLSLLVDSSRRAGADIVKTSTGVY 172 (234)
T ss_dssp CHHHHHHHHHHHHHTTCSEEESCCSSS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 678899999999999999999997765
No 218
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=24.80 E-value=3e+02 Score=22.79 Aligned_cols=102 Identities=14% Similarity=0.141 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHh--HHHHHHHHHcCCcCEEEcCCC--CH-HHHHHHhcCCCceE
Q 024724 23 VSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGK--IGEMKKLVEEGKIKYIGLSEA--SP-DTIRRAHGVHPITA 97 (263)
Q Consensus 23 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~--~~~l~~l~~~Gkir~iGvs~~--~~-~~l~~~~~~~~~~~ 97 (263)
++.++..++++.+.+.|+..|.-. | | |.++-. .+.++.+++.+.+..+.+.+. -. +.+..+.+ ..++.
T Consensus 50 ls~e~i~~~i~~~~~~g~~~i~~t---G-G--EPll~~~l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~-~g~~~ 122 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELGVKKIRIT---G-G--EPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYD-AGLRR 122 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE---S-S--CGGGSTTHHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHH-HTCCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEe---C-C--CccchhhHHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHH-CCCCE
Confidence 578999999999999999888753 3 2 443322 355666666666666766432 22 23333332 23334
Q ss_pred EeccCCCccc-----------chh--hhhHHHHHHhCCceeecccCc
Q 024724 98 VQMEWSLWTR-----------DIE--EEIIPLCRELGIGIVPYSPLG 131 (263)
Q Consensus 98 ~q~~~n~~~~-----------~~~--~~~~~~~~~~gi~v~a~~~l~ 131 (263)
+++...-+++ ..+ .+.++.+++.|+.+....++.
T Consensus 123 v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv~ 169 (340)
T 1tv8_A 123 INVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQ 169 (340)
T ss_dssp EEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred EEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEEe
Confidence 4443332221 111 345666777887555444443
No 219
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=30.66 E-value=15 Score=26.24 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=23.6
Q ss_pred hhhHHHHHHhCCceeecccCcCcccCC
Q 024724 111 EEIIPLCRELGIGIVPYSPLGRGFFGG 137 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~l~~G~L~~ 137 (263)
..+++.++++||.++-.-+|++-+...
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr~Ly~~ 56 (114)
T 3b0z_B 30 LRIREIGAEHRVPTLEAPPLARALYRH 56 (114)
Confidence 579999999999999999999877643
No 220
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=24.77 E-value=3.3e+02 Score=23.28 Aligned_cols=67 Identities=12% Similarity=-0.062 Sum_probs=48.1
Q ss_pred HHHHHHHHHcCCcCEEEc-CCCCHHHHHHHhcCC----CceEEeccCCCccc-chhhhhHHHHHHhCCc---eeec
Q 024724 61 IGEMKKLVEEGKIKYIGL-SEASPDTIRRAHGVH----PITAVQMEWSLWTR-DIEEEIIPLCRELGIG---IVPY 127 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~----~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~---v~a~ 127 (263)
++.+.+++++-.|-=.+- +-++...++++++.. ..+++|+..+-.-- ..-.++...|+++|+. ++..
T Consensus 250 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 250 YALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHHHHHHHHHHHHHCCCCCceEeec
Confidence 677888887655543332 345888899998877 78999987665422 1236899999999999 7765
No 221
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=24.68 E-value=97 Score=24.28 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=27.1
Q ss_pred CCcCEEEcC-CCCHHHHHHHhcCCCceEEeccC
Q 024724 71 GKIKYIGLS-EASPDTIRRAHGVHPITAVQMEW 102 (263)
Q Consensus 71 Gkir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~ 102 (263)
..+..+||. |.+.+.+.++++...++++|++=
T Consensus 51 ~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG 83 (203)
T 1v5x_A 51 PFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHG 83 (203)
T ss_dssp SSSEEEEEESSCCHHHHHHHHHHTTCSEEEECS
T ss_pred CCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECC
Confidence 468899985 56889999999999999999873
No 222
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=24.56 E-value=35 Score=22.84 Aligned_cols=25 Identities=12% Similarity=0.017 Sum_probs=17.9
Q ss_pred HHHHHHHHHcCCCHHHHHHHHhhcC
Q 024724 169 FRIENLAKKYKCTSAQLALAWVLGQ 193 (263)
Q Consensus 169 ~~l~~ia~~~g~s~~q~al~w~l~~ 193 (263)
++|+++.++.|+|..++|-+--++.
T Consensus 27 ~rLk~lR~~~glTq~eLA~~~GiS~ 51 (88)
T 3t76_A 27 NKLWKLLIDRDMKKGELREAVGVSK 51 (88)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCH
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcCH
Confidence 4777788888888888886654433
No 223
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=24.56 E-value=3.1e+02 Score=22.96 Aligned_cols=100 Identities=11% Similarity=0.120 Sum_probs=64.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCc-CCCch----hHHHHh-HHHHHHHHHc-CCcCEEEcCCCCHHHHHHHhcCCCce
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVY-GQNAN----ETLLGK-IGEMKKLVEE-GKIKYIGLSEASPDTIRRAHGVHPIT 96 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Y-g~G~s----E~~lG~-~~~l~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~ 96 (263)
+.+.+.+..+..++.|-..+|....- .+|.. |+.+-+ ...++.+++. +. -|.|-++.++.++++++...--
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~v--piSIDT~~~~Va~aAl~aGa~i 108 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDV--LISIDTWKSQVAEAALAAGADL 108 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCC--EEEEECSCHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCc--eEEEeCCCHHHHHHHHHcCCCE
Confidence 45666666677778999999986422 23321 233333 4555666655 32 5788899999999999874432
Q ss_pred EEeccCCCcccchhhhhHHHHHHhCCceeeccc
Q 024724 97 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 97 ~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
+|- .|-... +.++++.+.++|..++.+..
T Consensus 109 IND--Vsg~~~--d~~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 109 VND--ITGLMG--DEKMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp EEE--TTTTCS--CTTHHHHHHHHTCEEEEECC
T ss_pred EEE--CCCCCC--ChHHHHHHHHcCCCEEEEec
Confidence 333 233222 35799999999999998753
No 224
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=24.35 E-value=23 Score=26.19 Aligned_cols=25 Identities=28% Similarity=0.485 Sum_probs=22.9
Q ss_pred hhhHHHHHHhCCceeecccCcCccc
Q 024724 111 EEIIPLCRELGIGIVPYSPLGRGFF 135 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~l~~G~L 135 (263)
..+++.++++||.++-.-||++-+.
T Consensus 84 ~~I~e~A~e~gVPi~e~~~LAr~Ly 108 (137)
T 3bzs_A 84 LQIIKLAELYDIPVIEDIPLARSLY 108 (137)
T ss_dssp HHHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEeCHHHHHHHH
Confidence 5799999999999999999998776
No 225
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=24.24 E-value=3.2e+02 Score=23.93 Aligned_cols=68 Identities=9% Similarity=0.031 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
++.+.++++.-.|- ..|=+-++...++++++...++++|+..+-+- -..-.++...|+.+|+.+...+
T Consensus 243 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~gv~~~~h~ 312 (433)
T 3rcy_A 243 VGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHL 312 (433)
T ss_dssp HHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTTTCEECCCC
T ss_pred HHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEecC
Confidence 67788888875554 33445578899999999888999998655431 1113679999999999988765
No 226
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=23.65 E-value=24 Score=26.35 Aligned_cols=25 Identities=24% Similarity=0.543 Sum_probs=22.9
Q ss_pred hhhHHHHHHhCCceeecccCcCccc
Q 024724 111 EEIIPLCRELGIGIVPYSPLGRGFF 135 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~l~~G~L 135 (263)
..+++.++++||.++-.-||++-+.
T Consensus 83 ~~I~e~A~e~gVPi~e~~~LAr~Ly 107 (144)
T 2jlj_A 83 QTVRKIAEEEGVPILQRIPLARALY 107 (144)
T ss_dssp HHHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEeCHHHHHHHH
Confidence 5799999999999999999998776
No 227
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=23.52 E-value=2.1e+02 Score=24.53 Aligned_cols=73 Identities=11% Similarity=0.035 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCC-cCCCchhHHHHhHHHHHHHHHcCCcCEEEcCCCCHHHHHHHhcCCCceEEec
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADV-YGQNANETLLGKIGEMKKLVEEGKIKYIGLSEASPDTIRRAHGVHPITAVQM 100 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~-Yg~G~sE~~lG~~~~l~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~q~ 100 (263)
+.+++.++++.+-+.|+.+++...- |. +... . .++.+.++++.=++--|++..++++...++++....|.+++
T Consensus 248 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~-~~~~--~-~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 248 PILTYTAAAALLNKHRIVYLHIAEVDWD-DAPD--T-PVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTT-BCCC--C-CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCcC-CCCC--c-cHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehh
Confidence 5677888999999999999998753 31 1110 1 14556667766567778888888999999999888888877
No 228
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=23.51 E-value=3.7e+02 Score=23.53 Aligned_cols=69 Identities=13% Similarity=0.012 Sum_probs=50.3
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.+++++-.|- +.|=+-++...++++++...++++|+..+-+-- ..-.++...|+.+|+.++..+.
T Consensus 280 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 280 TEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp GGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred HHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 56677777764443 444466788999999998889999987665321 1236799999999999877655
No 229
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=23.44 E-value=2.7e+02 Score=23.52 Aligned_cols=72 Identities=14% Similarity=0.017 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCcCEE-EcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcC
Q 024724 61 IGEMKKLVEEGKIKYI-GLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGR 132 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~ 132 (263)
++.+.+++++-.|-=. |=+-++...++++++....+++|+..+-.-- ..-.++...|+++|+.++....+..
T Consensus 221 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 294 (369)
T 2zc8_A 221 LLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGMLEA 294 (369)
T ss_dssp SHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCCCC
T ss_pred HHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 5667777766444322 3344678888888887778888876543211 1126789999999999655544443
No 230
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=23.15 E-value=1.8e+02 Score=24.91 Aligned_cols=73 Identities=12% Similarity=0.080 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+|.++-.+- +.|=|-++...++++++...++++|+..+-.-- ..-.++...|+++|+.++..+.+..+
T Consensus 241 ~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ 315 (386)
T 1wue_A 241 FLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLGGMFESG 315 (386)
T ss_dssp SHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEECCCcccH
Confidence 67777777664432 334455678888888877778888876554211 11267899999999999876665543
No 231
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=23.05 E-value=2.4e+02 Score=22.33 Aligned_cols=46 Identities=7% Similarity=0.126 Sum_probs=28.9
Q ss_pred HHHHHHhcCCCceEEeccCCCccc---chhhhhHHHHHHhCCceeeccc
Q 024724 84 DTIRRAHGVHPITAVQMEWSLWTR---DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 84 ~~l~~~~~~~~~~~~q~~~n~~~~---~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
....+.+....++.+++....... ..-.++.+.++++|+.+.+..+
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 68 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIG 68 (290)
T ss_dssp HHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecC
Confidence 344444444677888875543222 1126788999999999887653
No 232
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=22.97 E-value=2.5e+02 Score=22.37 Aligned_cols=41 Identities=7% Similarity=0.156 Sum_probs=26.8
Q ss_pred cceeccccCCCCCCCCC-CHHHHHHHHHHHHHcCCCeEeccC
Q 024724 7 KLGLGCMNLSSGYSSPV-SEEDGISMIKHAFSKGITFFDTAD 47 (263)
Q Consensus 7 ~lglGt~~~g~~~~~~~-~~~~~~~~l~~A~~~Gi~~~DTA~ 47 (263)
+||+.++.++..+.... ..-...+.++.+-+.|+..++...
T Consensus 11 klg~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~ 52 (301)
T 3cny_A 11 KWGIAPIGWRNDDIPSIGKDNNLQQLLSDIVVAGFQGTEVGG 52 (301)
T ss_dssp EEEECGGGTCCSSSTTTTTTCCHHHHHHHHHHHTCCEECCCT
T ss_pred eEEeccccccCccccccccCCCHHHHHHHHHHhCCCEEEecC
Confidence 58888888854322110 112356778888899999999873
No 233
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=22.93 E-value=33 Score=20.70 Aligned_cols=26 Identities=27% Similarity=0.107 Sum_probs=16.7
Q ss_pred HHHHHHHHHcCCCHHHHHHHHhhcCC
Q 024724 169 FRIENLAKKYKCTSAQLALAWVLGQG 194 (263)
Q Consensus 169 ~~l~~ia~~~g~s~~q~al~w~l~~~ 194 (263)
+.|+++.++.|+|..++|-+--++..
T Consensus 8 ~~l~~~r~~~g~s~~~lA~~~gis~~ 33 (68)
T 2r1j_L 8 ERIRARRKKLKIRQAALGKMVGVSNV 33 (68)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTSCHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHCCCHH
Confidence 46666677777777777765544443
No 234
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=22.87 E-value=3.2e+02 Score=22.93 Aligned_cols=104 Identities=8% Similarity=0.021 Sum_probs=60.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeccCCcCCCch----hHHHHhHHHHHHHHHcCCcCEEEcC---CCCHHHHHHHh--cCC
Q 024724 23 VSEEDGISMIKHAFSKGITFFDTADVYGQNAN----ETLLGKIGEMKKLVEEGKIKYIGLS---EASPDTIRRAH--GVH 93 (263)
Q Consensus 23 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~s----E~~lG~~~~l~~l~~~Gkir~iGvs---~~~~~~l~~~~--~~~ 93 (263)
++.++..++++..-++|+.+|.....-.+|.. -.+. .|+.|+.+++.-.++.-.+. |..++.+.++. ...
T Consensus 21 ~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~-~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~~ 99 (320)
T 3dxi_A 21 FNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYT-PVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPIIG 99 (320)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHC-CHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGTT
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccC-hHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhhc
Confidence 47888999999988999999998732111211 1221 35666666554455555542 22223343332 125
Q ss_pred CceEEeccCCCcccchhhhhHHHHHHhCCceeec
Q 024724 94 PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 94 ~~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~ 127 (263)
.++.+.+..++-+-..-.+.+++++++|+.+...
T Consensus 100 Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 100 LVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp TCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 6676666544432222257788899999887654
No 235
>4e2i_2 DNA polymerase alpha subunit B; replication initiation, hydrolase-DNA binding complex, hydro binding protein complex; HET: DNA; 5.00A {Homo sapiens}
Probab=22.79 E-value=88 Score=20.63 Aligned_cols=26 Identities=8% Similarity=0.135 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhh
Q 024724 166 NIYFRIENLAKKYKCTSAQLALAWVL 191 (263)
Q Consensus 166 ~~~~~l~~ia~~~g~s~~q~al~w~l 191 (263)
..++++.++|..|+++..+++-.|+.
T Consensus 22 ~v~eKl~ElC~~y~~~~~e~V~ew~A 47 (78)
T 4e2i_2 22 ALIEKLVELCVQYGQNEEGMVGELIA 47 (78)
T ss_dssp HHHHHHHTHHHHSCCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 57799999999999999998877653
No 236
>3hou_D DNA-directed RNA polymerase II subunit RPB4; RNA polymerase II, metal-binding, transcription bubble; HET: BRU; 3.20A {Saccharomyces cerevisiae} PDB: 1nt9_D 1y1w_D 1y1y_D 1y77_D* 2b63_D* 2b8k_D 2ja5_D* 2ja6_D* 2ja7_D* 2ja8_D* 2r7z_D 2r92_D 2r93_D 1y1v_D* 3fki_D 3h3v_E 2vum_D* 3hov_D* 3how_D* 3hox_D* ...
Probab=22.37 E-value=93 Score=24.80 Aligned_cols=61 Identities=15% Similarity=0.099 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccCCCcHHHHHHhhhccCCCCCHHHHHHHHHhCCCC
Q 024724 165 KNIYFRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPGTTKIKNLDDNIDSLRIKLTKEDLKEISDAVPIE 235 (263)
Q Consensus 165 ~~~~~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g~~~~~~l~enl~a~~~~Lt~e~~~~i~~~~~~~ 235 (263)
.+....++++-...++++.++|. .+=..+.+++.++..+..+...++++++..|-..+.++
T Consensus 157 ~EAv~aVrELL~~~gLheFEiAq----------LANLcPeTaDEARALIPSL~~k~sDEeLqeILdeLsky 217 (221)
T 3hou_D 157 QETVGAVIQLLKSTGLHPFEVAQ----------LGSLACDTADEAKTLIPSLNNKISDDELERILKELSNL 217 (221)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHH----------HHHSCCCSHHHHHHHCTTCTTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCChHHhhe----------ecccCCCCHHHHHHHHHhhcccCCHHHHHHHHHHHHHh
Confidence 34556777777778888888773 22234567899999998887789999998887766544
No 237
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=22.33 E-value=97 Score=17.98 Aligned_cols=22 Identities=23% Similarity=0.098 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHcCCCHHHHHH
Q 024724 166 NIYFRIENLAKKYKCTSAQLAL 187 (263)
Q Consensus 166 ~~~~~l~~ia~~~g~s~~q~al 187 (263)
+..++|..+|++.|.|.+++.-
T Consensus 13 ~l~~~l~~lA~~~~rs~s~lir 34 (52)
T 2gpe_A 13 ATRERIKSAATRIDRTPHWLIK 34 (52)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHH
Confidence 4567999999999999887653
No 238
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=22.19 E-value=3.8e+02 Score=23.15 Aligned_cols=97 Identities=16% Similarity=0.130 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHHHHcCCCeE-------eccCCcCCCchhHHHHhHHHHHHHHH-cCCcCEEEcCCCCHHHHHHHhcCCCc
Q 024724 24 SEEDGISMIKHAFSKGITFF-------DTADVYGQNANETLLGKIGEMKKLVE-EGKIKYIGLSEASPDTIRRAHGVHPI 95 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~-------DTA~~Yg~G~sE~~lG~~~~l~~l~~-~Gkir~iGvs~~~~~~l~~~~~~~~~ 95 (263)
+.+++.++++.+.++|..++ +|+...-.|..++ | ++.|.+.++ .|. -+-.+-|+...+..+.+. +
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~e--g-l~~L~~~~~~~Gl--~~~te~~d~~~~~~l~~~--v 226 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLE--G-LKILKRVSDEYGL--GVISEIVTPADIEVALDY--V 226 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHH--H-HHHHHHHHHHHTC--EEEEECCSGGGHHHHTTT--C
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHH--H-HHHHHHHHHHcCC--EEEEecCCHHHHHHHHhh--C
Confidence 88999999999999999988 3443211233322 1 345555544 454 344566788888777654 6
Q ss_pred eEEeccCCCcccchhhhhHHHHHHhCCceeecccC
Q 024724 96 TAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 130 (263)
Q Consensus 96 ~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~~l 130 (263)
++.|+.--.+.. .+++..+.+.|..|+.....
T Consensus 227 d~lkIgs~~~~n---~~LL~~~a~~gkPVilk~G~ 258 (385)
T 3nvt_A 227 DVIQIGARNMQN---FELLKAAGRVDKPILLKRGL 258 (385)
T ss_dssp SEEEECGGGTTC---HHHHHHHHTSSSCEEEECCT
T ss_pred CEEEECcccccC---HHHHHHHHccCCcEEEecCC
Confidence 788884332222 36777777888877765555
No 239
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=22.00 E-value=4.2e+02 Score=23.49 Aligned_cols=101 Identities=9% Similarity=0.060 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHHHHHcCCCeEecc-CCcCCCc----hhHHHHh-HHHHHHHHHcC-C---cCEEEcCCCCHHHHHHHhc-
Q 024724 23 VSEEDGISMIKHAFSKGITFFDTA-DVYGQNA----NETLLGK-IGEMKKLVEEG-K---IKYIGLSEASPDTIRRAHG- 91 (263)
Q Consensus 23 ~~~~~~~~~l~~A~~~Gi~~~DTA-~~Yg~G~----sE~~lG~-~~~l~~l~~~G-k---ir~iGvs~~~~~~l~~~~~- 91 (263)
.+.+++.+..++.++.|...+|.. .+-.+|. .|+.+.+ ...++.++++. . =--|.|-++.++.++++++
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~~ 288 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAK 288 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHhh
Confidence 366778888888889999999975 2222332 2344444 45566666511 1 1258888999999999998
Q ss_pred -CCC-ceEEeccCCCcccchhhhhHHHHHHhCCceeecc
Q 024724 92 -VHP-ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 92 -~~~-~~~~q~~~n~~~~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
... +-+|-+.- .. ..++++.++++|..++.+.
T Consensus 289 ~aGa~i~INDVsg---~~--d~~m~~v~a~~g~~vVlMh 322 (442)
T 3mcm_A 289 HHDIIWMINDVEC---NN--IEQKAQLIAKYNKKYVIIH 322 (442)
T ss_dssp HGGGCCEEEECCC---TT--HHHHHHHHHHHTCEEEEEC
T ss_pred CCCCCEEEEcCCC---CC--ChHHHHHHHHhCCeEEEEC
Confidence 432 21333322 12 4689999999999999754
No 240
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=22.00 E-value=1.4e+02 Score=23.97 Aligned_cols=47 Identities=11% Similarity=-0.012 Sum_probs=28.8
Q ss_pred HHHHHHHhcCCCceEEeccCCCc---ccchhhhhHHHHHHhCCceee-ccc
Q 024724 83 PDTIRRAHGVHPITAVQMEWSLW---TRDIEEEIIPLCRELGIGIVP-YSP 129 (263)
Q Consensus 83 ~~~l~~~~~~~~~~~~q~~~n~~---~~~~~~~~~~~~~~~gi~v~a-~~~ 129 (263)
.....+.+....++.+++....+ ....-.++.+.++++|+.+.+ .+|
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~ 69 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGP 69 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecC
Confidence 44444444556677777754322 111226788999999999887 444
No 241
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=21.97 E-value=3.9e+02 Score=23.14 Aligned_cols=68 Identities=10% Similarity=0.010 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCcCE-EEcCCCCHHHHHHHhcCCCceEEeccCCCcc-cchhhhhHHHHHHhCCceeecc
Q 024724 61 IGEMKKLVEEGKIKY-IGLSEASPDTIRRAHGVHPITAVQMEWSLWT-RDIEEEIIPLCRELGIGIVPYS 128 (263)
Q Consensus 61 ~~~l~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~-~~~~~~~~~~~~~~gi~v~a~~ 128 (263)
++.+.++++.-.|-= .|=+-++...++++++...++++|+..+-.- -..-.++...|+.+|+.+....
T Consensus 241 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~kia~~A~~~gi~v~~h~ 310 (412)
T 4e4u_A 241 EEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATLAEVHYAQIAPHL 310 (412)
T ss_dssp HHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 677888888755543 3334567788999999888999998776542 1223679999999999987654
No 242
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=21.91 E-value=1e+02 Score=26.73 Aligned_cols=72 Identities=17% Similarity=0.173 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCc-CEEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeecccCcCc
Q 024724 61 IGEMKKLVEEGKI-KYIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSPLGRG 133 (263)
Q Consensus 61 ~~~l~~l~~~Gki-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~l~~G 133 (263)
++.+.+|.++-.| -+.|=|-++...+.++++...++++|+..+. -- ..-.++...|+.+|+.++..+.+.++
T Consensus 230 ~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~i~~~A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 230 WDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEALDIAAVARAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHHHHHHHHHTTCEEEECCSSCCH
T ss_pred HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 6666677665333 2445566788888888888888888886554 11 11267889999999999987766554
No 243
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=21.83 E-value=3e+02 Score=23.13 Aligned_cols=80 Identities=11% Similarity=0.064 Sum_probs=45.1
Q ss_pred hhhHHHHHHhCCceeecccCcCcccCCCCcCCCCCCCcccccCCCCCCcchhhhHHHHHHHHHHHHHcCCCHHHHHHHHh
Q 024724 111 EEIIPLCRELGIGIVPYSPLGRGFFGGKAVVESVPADSILHFFPRYKGENLDRNKNIYFRIENLAKKYKCTSAQLALAWV 190 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~~q~al~w~ 190 (263)
..+++++.++||.+.-.|+=---+.+ .|.+.-.+.+...+.+..+.++|+++|+- +
T Consensus 63 ~~il~~n~~~~I~~yRiSS~l~P~~t----------------hp~~~~~~~~~~~~~l~~iG~~a~~~~iR--------L 118 (310)
T 3tc3_A 63 KNILEWNLKHEILFFRISSNTIPLAS----------------HPKFHVNWKDKLSHILGDIGDFIKENSIR--------I 118 (310)
T ss_dssp HHHHHHHHHTTCCEEECCTTSSTTTT----------------STTCCCCHHHHTHHHHHHHHHHHHHTTCE--------E
T ss_pred HHHHHHHHHcCCEEEEeCcccCCCcc----------------ccccccchHHHHHHHHHHHHHHHHHcCcE--------E
Confidence 57999999999999875432111111 01222233455667788888999998863 1
Q ss_pred hcCCCceeeccCCCcHHHHHHhhhc
Q 024724 191 LGQGDDVVPIPGTTKIKNLDDNIDS 215 (263)
Q Consensus 191 l~~~~v~~vi~g~~~~~~l~enl~a 215 (263)
--||+ -.++.++.+++-++..++-
T Consensus 119 S~HPg-qF~vL~S~~~~Vv~~SI~d 142 (310)
T 3tc3_A 119 SMHPG-QYVVLNSVREEVVRSSIME 142 (310)
T ss_dssp EECCC-TTCCTTCSSHHHHHHHHHH
T ss_pred EecCC-CCccCCCCCHHHHHHHHHH
Confidence 22333 3444445555544444443
No 244
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=21.73 E-value=1.9e+02 Score=24.35 Aligned_cols=76 Identities=9% Similarity=0.047 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCC-c-CCCc-hhHHHHhHHHHHHHHHcCCcCEEEcCCC-CHHHHHHHhcCCCceEEe
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADV-Y-GQNA-NETLLGKIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHGVHPITAVQ 99 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~-Y-g~G~-sE~~lG~~~~l~~l~~~Gkir~iGvs~~-~~~~l~~~~~~~~~~~~q 99 (263)
+.+++.++++.+.+.|+.+++.+.- + .... ...-. .++.+.++++.=.+--++..+. +.+...++++....|.++
T Consensus 227 ~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~-~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~ 305 (338)
T 1z41_A 227 DIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGY-QVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIF 305 (338)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTT-THHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccc-hHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEe
Confidence 6788999999999999999997542 1 1000 00000 1455566666546667787777 788899999887778777
Q ss_pred c
Q 024724 100 M 100 (263)
Q Consensus 100 ~ 100 (263)
+
T Consensus 306 i 306 (338)
T 1z41_A 306 I 306 (338)
T ss_dssp E
T ss_pred e
Confidence 6
No 245
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=21.70 E-value=3.3e+02 Score=22.23 Aligned_cols=99 Identities=10% Similarity=0.148 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcC----CCc-----hhHHHHh-------HHHHHHHHHc-CCcCEEEcCCCC----
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYG----QNA-----NETLLGK-------IGEMKKLVEE-GKIKYIGLSEAS---- 82 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg----~G~-----sE~~lG~-------~~~l~~l~~~-Gkir~iGvs~~~---- 82 (263)
+.+.+.++++...+.|...+...--|. .|. +++.+.. ++.+++++++ -.+--+.++-++
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYA 111 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 788999999999999999998764443 221 2223322 6677777776 356666655333
Q ss_pred --HHHHHHHhcCCCceEEecc-CCCcccchhhhhHHHHHHhCCcee
Q 024724 83 --PDTIRRAHGVHPITAVQME-WSLWTRDIEEEIIPLCRELGIGIV 125 (263)
Q Consensus 83 --~~~l~~~~~~~~~~~~q~~-~n~~~~~~~~~~~~~~~~~gi~v~ 125 (263)
.+.+.+.+....++.+-+. ..+ +. ..++.+.|+++|+.++
T Consensus 112 ~g~~~f~~~~~~aGvdGvIipDlp~-ee--~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 112 RGIDDFYQRCQKAGVDSVLIADVPT-NE--SQPFVAAAEKFGIQPI 154 (271)
T ss_dssp TCHHHHHHHHHHHTCCEEEETTSCG-GG--CHHHHHHHHHTTCEEE
T ss_pred HhHHHHHHHHHHCCCCEEEECCCCH-HH--HHHHHHHHHHcCCeEE
Confidence 2333333333344433332 221 11 2578888999998755
No 246
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=21.51 E-value=2.9e+02 Score=23.28 Aligned_cols=82 Identities=11% Similarity=0.012 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccC-CcCCC---chhHHHHhHHHHHHHHHcCCcCEEEcCCC-CHHHHHHHhcCCCceEE
Q 024724 24 SEEDGISMIKHAFSKGITFFDTAD-VYGQN---ANETLLGKIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHGVHPITAV 98 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~-~Yg~G---~sE~~lG~~~~l~~l~~~Gkir~iGvs~~-~~~~l~~~~~~~~~~~~ 98 (263)
+.++..++++..-+.|+.+++.+. .+..- ..+.. .++...++++.=.+--++..+. +++..+++++....|.+
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~--~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V 304 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGY--QVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLV 304 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTT--THHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccc--cHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEE
Confidence 567889999999999999999863 22110 00100 2455666776656777787776 78888999888878877
Q ss_pred ec-cCCCccc
Q 024724 99 QM-EWSLWTR 107 (263)
Q Consensus 99 q~-~~n~~~~ 107 (263)
++ +..+.++
T Consensus 305 ~iGR~~lanP 314 (340)
T 3gr7_A 305 FLGRELLRNP 314 (340)
T ss_dssp EECHHHHHCT
T ss_pred EecHHHHhCc
Confidence 76 3334444
No 247
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=21.38 E-value=2.8e+02 Score=23.41 Aligned_cols=55 Identities=13% Similarity=-0.004 Sum_probs=36.4
Q ss_pred CCHHHHHHHhcC-CCceEEeccCCCcccc-hhhhhHHHHHHhCCceeecccCcCccc
Q 024724 81 ASPDTIRRAHGV-HPITAVQMEWSLWTRD-IEEEIIPLCRELGIGIVPYSPLGRGFF 135 (263)
Q Consensus 81 ~~~~~l~~~~~~-~~~~~~q~~~n~~~~~-~~~~~~~~~~~~gi~v~a~~~l~~G~L 135 (263)
.+.+.++++++. ....++....|+.-.- .-.++.+.|+++|+-++.-.+.+.+.+
T Consensus 139 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~ 195 (392)
T 3qhx_A 139 ADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL 195 (392)
T ss_dssp TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT
T ss_pred CCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc
Confidence 477788777753 2233444455543221 237899999999999998888776543
No 248
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=26.80 E-value=20 Score=23.10 Aligned_cols=27 Identities=26% Similarity=0.535 Sum_probs=15.8
Q ss_pred cccchhhhhHHHHHHhCCceeecccCc
Q 024724 105 WTRDIEEEIIPLCRELGIGIVPYSPLG 131 (263)
Q Consensus 105 ~~~~~~~~~~~~~~~~gi~v~a~~~l~ 131 (263)
+.+..++.++..|++.|-..-.|+.++
T Consensus 17 WTReeDR~IL~~cq~~G~s~~tfa~iA 43 (70)
T 2lr8_A 17 WTRNDDRVILLECQKRGPSSKTFAYLA 43 (70)
Confidence 445445677777777775444444444
No 249
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=21.19 E-value=75 Score=19.37 Aligned_cols=30 Identities=17% Similarity=0.102 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHhhcCC
Q 024724 165 KNIYFRIENLAKKYKCTSAQLALAWVLGQG 194 (263)
Q Consensus 165 ~~~~~~l~~ia~~~g~s~~q~al~w~l~~~ 194 (263)
....+.|+.+-++.|+|..++|-+--++..
T Consensus 12 ~~~~~~l~~~r~~~g~s~~~lA~~~gis~~ 41 (74)
T 1y7y_A 12 VKFGQRLRELRTAKGLSQETLAFLSGLDRS 41 (74)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHCcCHH
Confidence 344567888888899999998876654433
No 250
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=20.85 E-value=2.1e+02 Score=23.48 Aligned_cols=57 Identities=16% Similarity=0.257 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHcCCC----eEeccCCc-CCCchhHHHHhHHHHHHHHHcC---CcCEEEcCCCC
Q 024724 25 EEDGISMIKHAFSKGIT----FFDTADVY-GQNANETLLGKIGEMKKLVEEG---KIKYIGLSEAS 82 (263)
Q Consensus 25 ~~~~~~~l~~A~~~Gi~----~~DTA~~Y-g~G~sE~~lG~~~~l~~l~~~G---kir~iGvs~~~ 82 (263)
.+.+.+.++.|.++||. .+|..-.. |.+ .|.-+-.++.+.++++.| .=--+|+||-+
T Consensus 146 ~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~-~~~~~~~l~~l~~~~~~~~p~~p~l~G~Snks 210 (271)
T 2yci_X 146 SQLAMELVANADAHGIPMTELYIDPLILPVNVA-QEHAVEVLETIRQIKLMANPAPRTVLGLSNVS 210 (271)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTS-THHHHHHHHHHHHHTTSSSSCCEEEEEGGGGG
T ss_pred HHHHHHHHHHHHHCCCCcccEEEecCCCccccC-HHHHHHHHHHHHHHHHhCCCCCCEEEeeCccc
Confidence 34567888888999998 78987554 433 344455577788887776 55577999854
No 251
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=20.82 E-value=3.5e+02 Score=22.65 Aligned_cols=98 Identities=10% Similarity=0.097 Sum_probs=57.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHc-CCcCEEEcCCCCHHHHHHHhcC---CCceEE
Q 024724 23 VSEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHGV---HPITAV 98 (263)
Q Consensus 23 ~~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~-Gkir~iGvs~~~~~~l~~~~~~---~~~~~~ 98 (263)
++.++-.++++...+.|+..|+..... .++. .++.++++.+. ..++..+++--....++++++. ...+.+
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~---~~~~---d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v 98 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPV---SSPG---DFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSRI 98 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTT---SCHH---HHHHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC---CCHh---HHHHHHHHHHhCCCCEEEEeecCCHHHHHHHHHhhcccCCCEE
Confidence 466788899999889999999986322 2442 35566666654 3456666654455566554443 233332
Q ss_pred ec---------cCCCcccch-----hhhhHHHHHHhCCceee
Q 024724 99 QM---------EWSLWTRDI-----EEEIIPLCRELGIGIVP 126 (263)
Q Consensus 99 q~---------~~n~~~~~~-----~~~~~~~~~~~gi~v~a 126 (263)
.+ .+|+-.... -.+.+++++++|+.+.-
T Consensus 99 ~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f 140 (325)
T 3eeg_A 99 HTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEF 140 (325)
T ss_dssp EEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEE
T ss_pred EEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 22 222211111 15788899999987653
No 252
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=20.59 E-value=1.4e+02 Score=23.90 Aligned_cols=19 Identities=5% Similarity=0.232 Sum_probs=15.2
Q ss_pred hhhHHHHHHhCCceeeccc
Q 024724 111 EEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 111 ~~~~~~~~~~gi~v~a~~~ 129 (263)
.++++.++++|+.+.+|.+
T Consensus 194 ~~~v~~~~~~G~~V~~WTv 212 (250)
T 3ks6_A 194 AGLMAQVQAAGLDFGCWAA 212 (250)
T ss_dssp HHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 5688888888888888853
No 253
>3qq6_A HTH-type transcriptional regulator SINR; helix-turn-helix motif, biofilm, repressor, SINI; 1.90A {Bacillus subtilis}
Probab=20.33 E-value=40 Score=21.53 Aligned_cols=50 Identities=16% Similarity=0.056 Sum_probs=27.2
Q ss_pred HHHHHHHHHcCCCHHHHHHHHhhcCCCceeeccC---CCcHHHHHHhhhccCC
Q 024724 169 FRIENLAKKYKCTSAQLALAWVLGQGDDVVPIPG---TTKIKNLDDNIDSLRI 218 (263)
Q Consensus 169 ~~l~~ia~~~g~s~~q~al~w~l~~~~v~~vi~g---~~~~~~l~enl~a~~~ 218 (263)
..|+.+-++.|+|..++|-+--++...+.-..-| .-+.+.+....++++.
T Consensus 13 ~~ik~~R~~~gltq~elA~~~gis~~~is~~E~G~~~~p~~~~l~~ia~~l~v 65 (78)
T 3qq6_A 13 QRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDV 65 (78)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTSCCCCBHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHHCc
Confidence 4667777777788777776655544433333333 1244455555554443
No 254
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=20.32 E-value=3.2e+02 Score=21.52 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeccCCcCCCchhHHHHhHHHHHHHHHc--CCcCEEEcCCCCHHHHHHHhcC-CCceEEec
Q 024724 24 SEEDGISMIKHAFSKGITFFDTADVYGQNANETLLGKIGEMKKLVEE--GKIKYIGLSEASPDTIRRAHGV-HPITAVQM 100 (263)
Q Consensus 24 ~~~~~~~~l~~A~~~Gi~~~DTA~~Yg~G~sE~~lG~~~~l~~l~~~--Gkir~iGvs~~~~~~l~~~~~~-~~~~~~q~ 100 (263)
+.+++.++++.+++.|++.+.-...-. ...+.+++++++ ..+...|. -.+.++++.+++. ..+. ..
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k~~--------~~~~~i~~l~~~~~~~~igagt-vl~~d~~~~A~~aGAd~v--~~ 104 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLRSQ--------HGLKAIQVLREQRPELCVGAGT-VLDRSMFAAVEAAGAQFV--VT 104 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESSST--------HHHHHHHHHHHHCTTSEEEEEC-CCSHHHHHHHHHHTCSSE--EC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCc--------cHHHHHHHHHHhCcccEEeeCe-EeeHHHHHHHHHCCCCEE--Ee
Confidence 677899999999999999998653211 112334434433 45556665 3677888777765 3332 11
Q ss_pred cCCCcccchhhhhHHHHHHhCCceee
Q 024724 101 EWSLWTRDIEEEIIPLCRELGIGIVP 126 (263)
Q Consensus 101 ~~n~~~~~~~~~~~~~~~~~gi~v~a 126 (263)
. ....++.+.|+++|+.++.
T Consensus 105 p------~~d~~v~~~~~~~g~~~i~ 124 (225)
T 1mxs_A 105 P------GITEDILEAGVDSEIPLLP 124 (225)
T ss_dssp S------SCCHHHHHHHHHCSSCEEC
T ss_pred C------CCCHHHHHHHHHhCCCEEE
Confidence 1 1236789999999987764
No 255
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=20.23 E-value=4.4e+02 Score=23.10 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=46.9
Q ss_pred HHHHHHHHHc-C-CcCEEEc--CCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeec
Q 024724 61 IGEMKKLVEE-G-KIKYIGL--SEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPY 127 (263)
Q Consensus 61 ~~~l~~l~~~-G-kir~iGv--s~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~ 127 (263)
|+.+.+|.++ | .|--+|= +..++..++++++..-.+++|+..|-.-- ..-.++...|+.+|+.++..
T Consensus 293 ~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~ 364 (428)
T 3tqp_A 293 WAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIIS 364 (428)
T ss_dssp HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 7888888775 3 2433464 33488899999988888888887664321 11267889999999996553
No 256
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=20.23 E-value=2.4e+02 Score=24.59 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCCcC-EEEcCCCCHHHHHHHhcCCCceEEeccCCCccc-chhhhhHHHHHHhCCceeeccc
Q 024724 61 IGEMKKLVEEGKIK-YIGLSEASPDTIRRAHGVHPITAVQMEWSLWTR-DIEEEIIPLCRELGIGIVPYSP 129 (263)
Q Consensus 61 ~~~l~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~n~~~~-~~~~~~~~~~~~~gi~v~a~~~ 129 (263)
++.+.++++.-.|- ..|=+-++...++++++...++++|+..+-.-- ..-.++...|+.+|+.++..++
T Consensus 262 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~ 332 (422)
T 3tji_A 262 SAWLEQVRQQSCVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGP 332 (422)
T ss_dssp GGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCC
T ss_pred HHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 55677777764443 333355677888888888888999987664321 1236799999999999887666
Done!