Query 024725
Match_columns 263
No_of_seqs 120 out of 1163
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 13:22:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024725.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024725hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t8j_A Purine nucleosidase, (I 100.0 2.9E-65 1E-69 458.3 25.3 256 1-262 53-310 (311)
2 1q8f_A Pyrimidine nucleoside h 100.0 1E-64 3.5E-69 455.8 24.8 251 3-262 57-308 (313)
3 1yoe_A Hypothetical protein YB 100.0 1.2E-64 4E-69 456.9 25.1 253 1-262 66-320 (322)
4 3t8i_A Purine nucleosidase, (I 100.0 4.9E-65 1.7E-69 455.2 22.2 253 1-262 52-306 (306)
5 2mas_A Inosine-uridine nucleos 100.0 1.2E-64 4.3E-69 455.5 24.7 253 1-262 54-309 (314)
6 3fz0_A Nucleoside hydrolase, p 100.0 1.7E-61 5.7E-66 440.3 19.9 257 2-262 60-358 (360)
7 2c40_A Inosine-uridine preferr 100.0 2.3E-58 7.8E-63 414.7 14.0 246 2-262 55-309 (312)
8 3epw_A IAG-nucleoside hydrolas 100.0 2.3E-57 7.9E-62 411.5 6.6 247 2-262 68-337 (338)
9 2yhg_A SDE_182CT, cellulose-bi 97.4 0.00012 4E-09 67.5 5.3 53 47-100 126-188 (437)
10 3syl_A Protein CBBX; photosynt 30.2 72 0.0025 26.5 5.3 50 48-97 152-201 (309)
No 1
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus}
Probab=100.00 E-value=2.9e-65 Score=458.27 Aligned_cols=256 Identities=30% Similarity=0.501 Sum_probs=234.3
Q ss_pred CCCCCCCeEeeCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHcCCCceEEEEecchHHHHHH
Q 024725 1 MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALA 80 (263)
Q Consensus 1 ~~gr~dIPV~~G~~~pl~~~~~~~~~~~hG~dGlg~~~~p~~~~~~~~~~A~~~l~e~~~~~p~~vtivaiGPlTNlA~a 80 (263)
++|| |||||+|+.+||.++. ..++++||.+|||+..+|.+...+.+++|+++|+++++++|++||||++|||||||+|
T Consensus 53 ~~g~-diPV~~Ga~~Pl~~~~-~~a~~~hG~~Glg~~~~p~~~~~~~~~~A~~~i~~~~~~~~~~vtiva~GpLTNlA~a 130 (311)
T 3t8j_A 53 QVNR-EIPVYPGANKPLLKNY-ITVEKVHGKGGIGDVTVEPKRLKAQEKHAALAIIDLANEYAGELEFLAISPLTNLALA 130 (311)
T ss_dssp HTTC-CCCEEECCSSCSSSCC-CCCHHHHCTTSSSSCCCCCSSCCCCSSCHHHHHHHHHHHTTTTEEEEECSCSHHHHHH
T ss_pred HcCC-CCCEEECCCCCCCCCC-ccchhhcCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHhCCCCeEEEEecChHHHHHH
Confidence 3799 9999999999999864 5678899999999999988777777899999999999999999999999999999999
Q ss_pred HHhCcchhhccCcEEEeccccCCCCCCCccccccccCCHHHHHHHHhcCCcEEEEcCccccccccCHHHHHHHHhcCChh
Q 024725 81 IKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRY 160 (263)
Q Consensus 81 l~~~P~~~~~i~~i~iMGG~~~~~Gn~~~~aE~N~~~DpeAA~~Vl~s~~~i~lvpldvt~~~~~~~~~~~~l~~~~~~~ 160 (263)
++++|++.++|++||||||++...||++|.+|||||+|||||++||+|++|++|+|||+|++..+++++++++++.++++
T Consensus 131 l~~~P~i~~~i~~iviMGG~~~~~GN~tp~aEfN~~~DPeAA~~V~~sg~~i~~v~ldvt~~~~lt~~~~~~l~~~~~~~ 210 (311)
T 3t8j_A 131 YLLDNSIVKKIKKVWVMGGAVFGIGNITPVAEFNIWVDPDAAKIVFNAGFDITMIPWDVIINYPVTDEEWNVIKNMKTRM 210 (311)
T ss_dssp HHHCTTHHHHEEEEEEECCCTTSCCSSSSSCCHHHHHCHHHHHHHHHTTCCEEEECHHHHTTSCBCHHHHHHHHTSCSHH
T ss_pred HHHChHHHhhcCEEEEcCCcccCCCCCCchhhhccccCHHHHHHHHhCCCCEEEecccccccccCCHHHHHHHHhhCCHH
Confidence 99999999999999999999988999999999999999999999999999999999999988888999999999888899
Q ss_pred hHHHHHHHHHHHHhhhhcCCCCcccCchHHHHHHHhcCCcee-eEeeeEEEEecC-CcceeEEEecCCcccccCCCCCCC
Q 024725 161 VQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFT-FKKGVVRVETQG-ICMGHTLMDQGLKRWNVSNPWTGY 238 (263)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~~-~~~~~v~V~~~g-~~~G~~~~d~~~~~~~~~~~~~~~ 238 (263)
++|+.+++++|.+++.+.++..++++||++|++++++|++|+ +++.+|+|+++| .+||+|+.|+.... ..+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~g~~g~~lhD~lava~~l~P~l~~~~~~~~v~Ve~~g~~t~G~tv~d~~~~~----~~~~~~ 286 (311)
T 3t8j_A 211 SELYVSMYLHYRQYSSTVQKINGHPHPDAITTAIAIDGSIATRREKRFVVIDNTDNITRGMTLVDRFDAD----TSWSDK 286 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHCGGGEEEEEEEEEEECCSSSTTTTCEEEECSCSS----SCSCSS
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcCcCHHHHHHHhCHHHhhccceeeEEEecCCCCCCceEEEecCCCc----ccCCCC
Confidence 999999999999887777778899999999999999999997 689999999996 79999999975320 112346
Q ss_pred CCcEEEeecCHHHHHHHHHHHHhc
Q 024725 239 SPVSVAWTVNVDKVLNYIKRLLMK 262 (263)
Q Consensus 239 ~~v~v~~~vd~~~f~~~l~~~l~~ 262 (263)
+|++|+++||.++|+++|.++|.+
T Consensus 287 ~n~~v~~~vD~~~f~~~~~~~l~~ 310 (311)
T 3t8j_A 287 PNAEIVYEINKKSFMEKIYDLLNW 310 (311)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHTC
T ss_pred CCEEEeeccCHHHHHHHHHHHHhh
Confidence 799999999999999999999865
No 2
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A*
Probab=100.00 E-value=1e-64 Score=455.80 Aligned_cols=251 Identities=27% Similarity=0.468 Sum_probs=231.4
Q ss_pred CCCCCeEeeCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHcCCCceEEEEecchHHHHHHHH
Q 024725 3 GCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALAIK 82 (263)
Q Consensus 3 gr~dIPV~~G~~~pl~~~~~~~~~~~hG~dGlg~~~~p~~~~~~~~~~A~~~l~e~~~~~p~~vtivaiGPlTNlA~al~ 82 (263)
||+|||||+|+++||.++. ..++++||.+|||+..+|.+...+.+++|+++|+++++++|++||||++|||||||+|++
T Consensus 57 g~~dIPV~~Ga~~pl~~~~-~~a~~~hG~~Glg~~~~p~~~~~~~~~~A~~~i~~~~~~~~~~vtiva~GPLTNlA~al~ 135 (313)
T 1q8f_A 57 LEINVPVYAGMPQPIMRQQ-IVADNIHGDTGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMR 135 (313)
T ss_dssp TTCCCCEEECCSSCSSSCC-CCCHHHHCTTSSCSCCCCCCCCCCCSSCHHHHHHHHHHHSCSCEEEEECSCSHHHHHHHH
T ss_pred CCCCCCEEeCCCccccCCC-CCccccCCCcCCCCCCCCCCccCCCCCcHHHHHHHHHHhCCCCEEEEEeccHHHHHHHHH
Confidence 7889999999999998853 556789999999999998877777789999999999999999999999999999999999
Q ss_pred hCcchhhccCcEEEeccccCCCCCCCccccccccCCHHHHHHHHhcCCcEEEEcCccccccccCHHHHHHHHhcCChhhH
Q 024725 83 RDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRYVQ 162 (263)
Q Consensus 83 ~~P~~~~~i~~i~iMGG~~~~~Gn~~~~aE~N~~~DpeAA~~Vl~s~~~i~lvpldvt~~~~~~~~~~~~l~~~~~~~~~ 162 (263)
++|++.++|++||||||++.. ||++|.+|||||+|||||++||+|++|++|+|||+|+++.+++++++++.+.+++.++
T Consensus 136 ~~P~i~~~i~~iviMGG~~~~-GN~tp~aEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~~~~~~~~~~~ 214 (313)
T 1q8f_A 136 MQPAILPKIREIVLMGGAYGT-GNFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGE 214 (313)
T ss_dssp HCGGGGGGEEEEEEECCCSSC-CSSSSSCCHHHHTCHHHHHHHHTSCSCEEEECHHHHGGGEECHHHHHHHHHHCHHHHH
T ss_pred HCHHHHHhCCEEEEECCCCCC-CCCCchhHHhhccCHHHHHHHHhCCCCEEEeChhhhhcccCCHHHHHHHHhcCChHHH
Confidence 999999999999999999986 9999999999999999999999999999999999999999999999999987889999
Q ss_pred HHHHHHHHHHHhhhhcCCCCcccCchHHHHHHHhcCCceeeEeeeEEEEecC-CcceeEEEecCCcccccCCCCCCCCCc
Q 024725 163 LLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQG-ICMGHTLMDQGLKRWNVSNPWTGYSPV 241 (263)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~v~V~~~g-~~~G~~~~d~~~~~~~~~~~~~~~~~v 241 (263)
++.+++++|.+++.+.+|..++++||++|++++++|++|++++.+|+|+++| .+||+|+.|+... +...+|+
T Consensus 215 ~~~~~~~~~~~~~~~~~g~~g~~lhD~lava~~~~p~~~~~~~~~v~Ve~~g~~t~G~tv~d~~~~-------~~~~~n~ 287 (313)
T 1q8f_A 215 LFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGV-------LGKPANT 287 (313)
T ss_dssp HHHHHHHHHHHHHHHHHCCSSEECTTHHHHHHHHCGGGEEEEEECEEECCCSSTTTTCEEECTTCT-------TCCCCCE
T ss_pred HHHHHHHHHHHHHHhccCcCCCccchHHHHHHHcCcceeEEEEEEEEEEeCCCCCCCeEEEecccc-------CCCCCCE
Confidence 9999999999887665667789999999999999999999999999999986 7999999996432 1246799
Q ss_pred EEEeecCHHHHHHHHHHHHhc
Q 024725 242 SVAWTVNVDKVLNYIKRLLMK 262 (263)
Q Consensus 242 ~v~~~vd~~~f~~~l~~~l~~ 262 (263)
+|+++||.++|+++|.++|.+
T Consensus 288 ~v~~~vD~~~f~~~~~~~l~~ 308 (313)
T 1q8f_A 288 KVGITIDTDWFWGLVEECVRG 308 (313)
T ss_dssp EEEEEECHHHHHHHHHHHHHT
T ss_pred EEEEecCHHHHHHHHHHHHHH
Confidence 999999999999999999864
No 3
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A*
Probab=100.00 E-value=1.2e-64 Score=456.91 Aligned_cols=253 Identities=31% Similarity=0.479 Sum_probs=225.3
Q ss_pred CCCCCCCeEeeCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHcCCCceEEEEecchHHHHHH
Q 024725 1 MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALA 80 (263)
Q Consensus 1 ~~gr~dIPV~~G~~~pl~~~~~~~~~~~hG~dGlg~~~~p~~~~~~~~~~A~~~l~e~~~~~p~~vtivaiGPlTNlA~a 80 (263)
++||.|||||+|+++||.++. ..+.++||.||||+..+|.+...+.+.+|+++|+++++++|++||||++|||||||+|
T Consensus 66 ~~g~~dIPV~~Ga~~Pl~~~~-~~a~~~HG~~Glg~~~~p~~~~~~~~~~Av~~i~~~l~~~p~~vtiva~GPLTNlA~a 144 (322)
T 1yoe_A 66 LLNRTDIPVAGGAVKPLMREL-IIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALL 144 (322)
T ss_dssp HTTCTTSCEEECCSSCSSSCC-CCC-----CCSSCSSCCCCCSSCCCSSCHHHHHHHHHHHCSSCEEEEECSCSHHHHHH
T ss_pred HcCCCCCCEEeCCCccccCCC-ccccccCCCCCCCCcCCCCCcCCCCcchHHHHHHHHHHhCCCCEEEEEeccHHHHHHH
Confidence 379999999999999998853 5678899999999999998877777899999999999999999999999999999999
Q ss_pred HHhCcchhhccCcEEEeccccCCCCCCCccccccccCCHHHHHHHHhcCCcEEEEcCccccccccCHHHHHHHHhcCChh
Q 024725 81 IKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKGRY 160 (263)
Q Consensus 81 l~~~P~~~~~i~~i~iMGG~~~~~Gn~~~~aE~N~~~DpeAA~~Vl~s~~~i~lvpldvt~~~~~~~~~~~~l~~~~~~~ 160 (263)
++++|++.++|++||+|||++. .||++|.+|||||+|||||++||+|++|++|+|||+|+++.++++++++|.+.+++.
T Consensus 145 l~~~P~i~~~i~~iviMGGa~~-~GN~tp~AEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~l~~~~~~~ 223 (322)
T 1yoe_A 145 LNSHPELHSKIARIVIMGGAMG-LGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPV 223 (322)
T ss_dssp HHHCGGGGGGEEEEEEECCCSS-CCSSSSSCCHHHHHCHHHHHHHHTSSSCEEEECHHHHTTSEECHHHHHHHHHHCSHH
T ss_pred HHHChHHHhhCCEEEEeCCCCC-CCCCCcccHhhcccCHHHHHHHHhCCCCEEEECccccccccCCHHHHHHHHhhCCcH
Confidence 9999999999999999999986 699999999999999999999999999999999999999999999999998878899
Q ss_pred hHHHHHHHHHHHHhh-hhcCCCCcccCchHHHHHHHhcCCceeeEeeeEEEEecC-CcceeEEEecCCcccccCCCCCCC
Q 024725 161 VQLLGDMCKFYRDWH-VKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQG-ICMGHTLMDQGLKRWNVSNPWTGY 238 (263)
Q Consensus 161 ~~~l~~~~~~~~~~~-~~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~v~V~~~g-~~~G~~~~d~~~~~~~~~~~~~~~ 238 (263)
++++.+++++|.+++ .+.++..++++||++|++++++|++|++++.+|+|+++| .+||+|++|+... +...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~g~~lhD~lava~~~~P~~~~~~~~~v~Ve~~g~~t~G~tv~d~~~~-------~~~~ 296 (322)
T 1yoe_A 224 STIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYL-------TGNK 296 (322)
T ss_dssp HHHHHHHHHHHHC-----CCCCSSEECCTHHHHHHHHCGGGEEEEEECEEECCSCSSCTTCEEECTTCC-------SSCC
T ss_pred HHHHHHHHHHHHHHHhhcccCCCCCccccHHHhhheecccceEEEEEEEEEEeCCCCCCceEEEecccc-------CCCC
Confidence 999999999998754 344566789999999999999999999999999999996 7999999997432 1245
Q ss_pred CCcEEEeecCHHHHHHHHHHHHhc
Q 024725 239 SPVSVAWTVNVDKVLNYIKRLLMK 262 (263)
Q Consensus 239 ~~v~v~~~vd~~~f~~~l~~~l~~ 262 (263)
+|++|+++||.++|+++|.++|.+
T Consensus 297 ~n~~v~~~vD~~~f~~~~~~~l~~ 320 (322)
T 1yoe_A 297 PNATVMVDVDRQGFVDLLADRLKF 320 (322)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHGG
T ss_pred CCeEEEeecCHHHHHHHHHHHHHh
Confidence 789999999999999999999864
No 4
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus}
Probab=100.00 E-value=4.9e-65 Score=455.17 Aligned_cols=253 Identities=28% Similarity=0.414 Sum_probs=232.7
Q ss_pred CCCCCCCeEeeCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHcCCCceEEEEecchHHHHHH
Q 024725 1 MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLALA 80 (263)
Q Consensus 1 ~~gr~dIPV~~G~~~pl~~~~~~~~~~~hG~dGlg~~~~p~~~~~~~~~~A~~~l~e~~~~~p~~vtivaiGPlTNlA~a 80 (263)
++||+|||||+|+++||.++. ..++++||.+|||+..+|.+...+.+++|+++|+++++++|++||||++|||||||+|
T Consensus 52 ~~g~~diPV~~Ga~~pl~~~~-~~~~~~hG~~Glg~~~~p~~~~~~~~~~A~~~i~~~~~~~~~~vtiva~GpLTNlA~a 130 (306)
T 3t8i_A 52 YIGKQDVPVYLGSQRPILGNW-RTVEEVHGSNGMSNWNYPEPNKRPEKEHAIDAILRLSKEHEGELEILAISPLTNIALA 130 (306)
T ss_dssp HTTCTTSCEEECCSSCTTCCC-CCCHHHHCTTSSTTCCCCCCSCCCCSSCHHHHHHHHHHHTTTTEEEEECSCSHHHHHH
T ss_pred hcCCCCCcEEEcCCccCCCCC-cccccccCCCCCCccCCCCccCCcCCccHHHHHHHHHHhCCCCEEEEEecChHHHHHH
Confidence 379999999999999998853 5677899999999999988777777899999999999999999999999999999999
Q ss_pred HHhCcchhhccCcEEEeccccCCCCCCCccccccccCCHHHHHHHHhcCCcEEEEcCcccccc-ccCHHHHHHHHhcCCh
Q 024725 81 IKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQV-KLTDADFLELRQSKGR 159 (263)
Q Consensus 81 l~~~P~~~~~i~~i~iMGG~~~~~Gn~~~~aE~N~~~DpeAA~~Vl~s~~~i~lvpldvt~~~-~~~~~~~~~l~~~~~~ 159 (263)
++++|++.++|++||+|||++ ..||++|.+|||||+|||||++||+|++|++|+|||+|+++ .++++++++|.+.+++
T Consensus 131 l~~~P~i~~~i~~iviMGG~~-~~GN~tp~aEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~~t~~~~~~l~~~~~~ 209 (306)
T 3t8i_A 131 YLKDPSVVKRVKKIWIMGGAF-SKGNTTPIAEFNFWVDPEAAKIVLDAGFDITIVPWEVAEISGSLNERDWEYISKLNTK 209 (306)
T ss_dssp HHHCGGGGGTCCEEEEECCCS-SCCSSSSSCCHHHHHCHHHHHHHHHTTCCEEEECHHHHHHHSEEEHHHHHHHHHHCCH
T ss_pred HHHChhHHhhcCEEEEecCCC-CCCCCCCchhhccccCHHHHHHHHhCCCCceEecchhccccccCCHHHHHHHHhhCCh
Confidence 999999999999999999996 47999999999999999999999999999999999999999 9999999999988899
Q ss_pred hhHHHHHHHHHHHHhhhhcCCCCcccCchHHHHHHHhcCCce-eeEeeeEEEEecCCcceeEEEecCCcccccCCCCCCC
Q 024725 160 YVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLF-TFKKGVVRVETQGICMGHTLMDQGLKRWNVSNPWTGY 238 (263)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~-~~~~~~v~V~~~g~~~G~~~~d~~~~~~~~~~~~~~~ 238 (263)
.++|+.+++++|..++.+.+|..++++||++|++++++|+++ ++++.+|+||++|.+||+|+.|+... +...
T Consensus 210 ~~~~~~~~~~~y~~~~~~~~g~~g~~~hD~lava~~l~P~l~~~~~~~~v~Ve~~g~t~G~tv~D~~~~-------~~~~ 282 (306)
T 3t8i_A 210 LSNFFINVNKTLKEYTTKNQGISGSIHPDSLTVSIAHDNSIILDSSLKYVDVELCSKSRGAMLIDWYSL-------HKNK 282 (306)
T ss_dssp HHHHHHHHTHHHHHHHHHHHSSSEEECHHHHHHHHHHCGGGEEEEEEECEEECCSGGGTTCEEECTTCC-------SSCC
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCcCCCHHHhhhhccccceeEEEEEEEEEEECCCCCeeEEeccccc-------CCCC
Confidence 999999999999988777777889999999999999999985 57899999999988999999997532 2346
Q ss_pred CCcEEEeecCHHHHHHHHHHHHhc
Q 024725 239 SPVSVAWTVNVDKVLNYIKRLLMK 262 (263)
Q Consensus 239 ~~v~v~~~vd~~~f~~~l~~~l~~ 262 (263)
+|++|+++||.++|+++|.++|.+
T Consensus 283 ~n~~V~~~vD~~~f~~~~~~~l~~ 306 (306)
T 3t8i_A 283 PNAEIVLKADGGKFKNLLFNSLSQ 306 (306)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHC
T ss_pred CCeEEEeccCHHHHHHHHHHHhhC
Confidence 799999999999999999999863
No 5
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A
Probab=100.00 E-value=1.2e-64 Score=455.53 Aligned_cols=253 Identities=25% Similarity=0.438 Sum_probs=231.8
Q ss_pred CCCCCCCeEeeCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCC-CCCccHHHHHHHHHHc-CCCceEEEEecchHHHH
Q 024725 1 MAGCPGVPVAEGSPEPLKGGKPRVAEFAHGSDGMGNISLTPPKAK-KCDKNASEFLVDKVSE-YPGEVSILALGPLTNLA 78 (263)
Q Consensus 1 ~~gr~dIPV~~G~~~pl~~~~~~~~~~~hG~dGlg~~~~p~~~~~-~~~~~A~~~l~e~~~~-~p~~vtivaiGPlTNlA 78 (263)
++||+|||||+|+++||.++. ..++++||.+|||+..+|.+... +.+.+|+++|++++++ +|++||||++|||||||
T Consensus 54 ~~g~~dIPV~~Ga~~pl~~~~-~~a~~~hG~~Glg~~~~p~~~~~~~~~~~A~~~i~~~~~~~~~~~vtiva~GPLTNlA 132 (314)
T 2mas_A 54 IAGITGVPIAAGCDKPLVRKI-MTAGHIHGESGMGTVAYPAEFKNKVDERHAVNLIIDLVMSHEPKTITLVPTGGLTNIA 132 (314)
T ss_dssp HTTCCSCCEEECCSSCSSSCC-CCCHHHHCSSSSTTCCCCSSCSSCBCSSCHHHHHHHHHHHSCTTCEEEEECSCSHHHH
T ss_pred HhCCCCCCEEeCCCcccCCCC-CCccccCCCCCCCCCCCCCccccccCCccHHHHHHHHHHhhCCCCEEEEEeccHHHHH
Confidence 379999999999999998854 45678999999999998887666 6788999999999999 99999999999999999
Q ss_pred HHHHhCcchhhccCcEEEeccccCCCCCCCccccccccCCHHHHHHHHhcCCcEEEEcCccccccccCHHHHHHHHhcCC
Q 024725 79 LAIKRDSSFASKVKNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLELRQSKG 158 (263)
Q Consensus 79 ~al~~~P~~~~~i~~i~iMGG~~~~~Gn~~~~aE~N~~~DpeAA~~Vl~s~~~i~lvpldvt~~~~~~~~~~~~l~~~~~ 158 (263)
+|++++|++.++|++||||||++ ..||++|.+|||||+|||||++||+|++|++|+|||+|+++.++++++++|.+.++
T Consensus 133 ~al~~~P~i~~~i~~iviMGG~~-~~GN~tp~aEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~l~~~~~ 211 (314)
T 2mas_A 133 MAARLEPRIVDRVKEVVLMGGGY-HEGNATSVAEFNIIIDPEAAHIVFNESWQVTMVGLDLTHQALATPPILQRVKEVDT 211 (314)
T ss_dssp HHHHHCTHHHHHSCEEEEECCCS-SCCSSSSSCCHHHHTCHHHHHHHHHSSSCEEEECHHHHTTCEECHHHHHHHHTTCS
T ss_pred HHHHHChhHHhhCCEEEEeCCcc-cCCCCCchhHHHhhcCHHHHHHHHhCCCCEEEeChhhhcccccCHHHHHHHHhcCC
Confidence 99999999999999999999999 46999999999999999999999999999999999999999999999999998888
Q ss_pred hhhHHHHHHHHHHHHhhhhcCCCCcccCchHHHHHHHhcCCceeeEeeeEEEEecC-CcceeEEEecCCcccccCCCCCC
Q 024725 159 RYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQG-ICMGHTLMDQGLKRWNVSNPWTG 237 (263)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~v~V~~~g-~~~G~~~~d~~~~~~~~~~~~~~ 237 (263)
+.++++.+++++|.+++.+.+|..++++||++|++++++|++|++++.+++|+++| .+||+|+.|+... ...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~g~~~~~lhD~lava~~~~p~~~~~~~~~v~Ve~~g~~t~G~tv~d~~~~-------~~~ 284 (314)
T 2mas_A 212 NPARFMLEIMDYYTKIYQSNRYMAAAAVHDPCAVAYVIDPSVMTTERVPVDIELTGKLTLGMTVADFRNP-------RPE 284 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCSSEECCHHHHHHHHHCGGGEEEEECCEEECSSCSSCTTCEEECCCSS-------CCS
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCcCCcHHHHHHHcChhheEEEEEeEEEEeCCCCCCceEEEecccc-------CCC
Confidence 99999999999999888765666789999999999999999999999999999997 6999999996432 123
Q ss_pred CCCcEEEeecCHHHHHHHHHHHHhc
Q 024725 238 YSPVSVAWTVNVDKVLNYIKRLLMK 262 (263)
Q Consensus 238 ~~~v~v~~~vd~~~f~~~l~~~l~~ 262 (263)
.+|++|+++||.++|+++|.++|.+
T Consensus 285 ~~~~~v~~~vD~~~f~~~~~~~l~~ 309 (314)
T 2mas_A 285 HCHTQVAVKLDFEKFWGLVLDALER 309 (314)
T ss_dssp SCSEEEEEEECHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCHHHHHHHHHHHHHh
Confidence 5799999999999999999999864
No 6
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei}
Probab=100.00 E-value=1.7e-61 Score=440.26 Aligned_cols=257 Identities=24% Similarity=0.312 Sum_probs=218.7
Q ss_pred CCCCCCeEeeCCCCCCCCCCCCCCCCc--cCCCCCCCCCCCCCCC--CCCCccHHHHHHHHHHcC-CCc---eEEEEecc
Q 024725 2 AGCPGVPVAEGSPEPLKGGKPRVAEFA--HGSDGMGNISLTPPKA--KKCDKNASEFLVDKVSEY-PGE---VSILALGP 73 (263)
Q Consensus 2 ~gr~dIPV~~G~~~pl~~~~~~~~~~~--hG~dGlg~~~~p~~~~--~~~~~~A~~~l~e~~~~~-p~~---vtivaiGP 73 (263)
+|| |||||+|+.+||.++ ..+.++ ||.||||+..+|.+.. ...+++|+++|+++++++ |++ ||||++||
T Consensus 60 ~g~-dIPV~~Ga~~pl~~~--~~~~~~~~hG~~Glg~~~~p~~~~~~~~~~~~A~~~i~~~~~~~~p~~~~~vtiva~GP 136 (360)
T 3fz0_A 60 YDA-DIPFFRGAEGPLVGE--RETVQWGGFGSDGFGDAGFPPSQRVALQPKRHAALEILKILEEAEPSDDVVYQLVALGP 136 (360)
T ss_dssp HTC-CCCEEECCSSCSSSS--CCSCCCCTTCTTSSCSCCCCCCSHHHHSCCSCHHHHHHHHHHHCCCCSSEEEEEEECSC
T ss_pred cCC-CCCEEEcCCCCCCCC--cchHHHHhhcccCcCcccCCCCccccccCCccHHHHHHHHHHhcCCCCCceEEEEEecC
Confidence 689 999999999999986 567788 9999999998876542 345789999999999999 888 99999999
Q ss_pred hHHHHHHHHhCcchhhcc-----CcEEEeccccCCCCCCCccccccccCCHHHHHHHHhc-CC--cEEEEcCcccccccc
Q 024725 74 LTNLALAIKRDSSFASKV-----KNIVVLGGAFFALGNVNPAAEANIYGDPEAADVVFTS-GA--NIAVVGINITTQVKL 145 (263)
Q Consensus 74 lTNlA~al~~~P~~~~~i-----~~i~iMGG~~~~~Gn~~~~aE~N~~~DpeAA~~Vl~s-~~--~i~lvpldvt~~~~~ 145 (263)
|||||+|++++|++.++| ++||||||++...||++|.+|||||+|||||++||+| ++ |++|+|||+|+++.+
T Consensus 137 LTNlA~al~~~P~~~~~ig~~kv~~iviMGG~~~~~GN~tp~aEfN~~~DPeAA~~V~~s~g~~~~i~~v~ldvt~~~~~ 216 (360)
T 3fz0_A 137 LTNVALALRLNPDLFSKLGTDTIPGIVIMNGTSESKGNSNMAAEFNSHCDPEAGVVVLQHKGWKCPVQLVNWEVTVNSPM 216 (360)
T ss_dssp SHHHHHHHHHCGGGGGGSSCSSSCSEEEECCCSSCCCSSSSSCCHHHHHCHHHHHHHHHCSCCSSCEEEECHHHHHTSCE
T ss_pred hHHHHHHHHhChHHHhhhccccCcEEEEECCCccCCCCCCCCcccccCcCHHHHHHHHhCcCCCCCeEEECccceeeeec
Confidence 999999999999999999 9999999999888999999999999999999999999 55 999999999999999
Q ss_pred CHHHHHHHHhcCCh-hh----------HHHHHHHHHHHHhhhhc-------------CCCCcccCchHHHHHHHhcCCce
Q 024725 146 TDADFLELRQSKGR-YV----------QLLGDMCKFYRDWHVKS-------------DGVHGIFLHDPVSFVALVRPDLF 201 (263)
Q Consensus 146 ~~~~~~~l~~~~~~-~~----------~~l~~~~~~~~~~~~~~-------------~~~~~~~~~D~la~a~~~~P~~~ 201 (263)
+.+++++|.+.+++ .+ +|+.+++++|..++... .+..++++||++|++++++|++|
T Consensus 217 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~g~~~~~lHD~lava~~l~P~l~ 296 (360)
T 3fz0_A 217 TWGFYDKLVNRESTPNGRVAVNQNKWQEFIEKLFQRLEAFTRIHDDGTRADTGDAEATQDVTCVVPDAVAVLVAIRPESV 296 (360)
T ss_dssp EHHHHHHHTTC-----------CCHHHHHHHHHHHHHHHHHC------------------CEECCHHHHHHHHHHCGGGE
T ss_pred CHHHHHHHHhcCCCcccccccccchHHHHHHHHHHHHHHHHhhhccccccccccccccCcCCCccccHHHHHHHhChhhe
Confidence 99999999875555 56 99999999998876432 23456799999999999999999
Q ss_pred e-eEeeeEEEEecC-CcceeEEEecCCcccccCCCCCCCCCcEEEeecCHHHHHHHHHHHHhc
Q 024725 202 T-FKKGVVRVETQG-ICMGHTLMDQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLLMK 262 (263)
Q Consensus 202 ~-~~~~~v~V~~~g-~~~G~~~~d~~~~~~~~~~~~~~~~~v~v~~~vd~~~f~~~l~~~l~~ 262 (263)
+ .++.+|+||++| .|||+|+.|+.... .....+...+|++|+++||.++|+++|.++|..
T Consensus 297 ~~~~~~~V~Ve~~g~~trG~Tv~D~~~~~-~~~~~~~~~~n~~V~~~vD~~~f~~~~~~~l~~ 358 (360)
T 3fz0_A 297 LDSFLTYVTVELHGRETRGATCIDWYGTE-QSMAKKGRWRNCNVITKVDNEMFLKALRDIVEY 358 (360)
T ss_dssp EEEEEECEEECSSCSSCTTCEEECSSCCH-HHHHHTTCCCCEEEEEEECHHHHHHHHHHHHTC
T ss_pred eeEEEEEEEEEeCCCCcceEEEecccccc-CcccccCCCCCeEEeEecCHHHHHHHHHHHhcc
Confidence 6 789999999998 79999999975421 100001123799999999999999999999853
No 7
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis}
Probab=100.00 E-value=2.3e-58 Score=414.66 Aligned_cols=246 Identities=25% Similarity=0.294 Sum_probs=204.4
Q ss_pred CCCCCCeEeeCCCCCCCCCCCCCCCCccCC--CCCCCCCCCCC-CCCCCCccHHHHHHHHHHcCCCceEEEEecchHHHH
Q 024725 2 AGCPGVPVAEGSPEPLKGGKPRVAEFAHGS--DGMGNISLTPP-KAKKCDKNASEFLVDKVSEYPGEVSILALGPLTNLA 78 (263)
Q Consensus 2 ~gr~dIPV~~G~~~pl~~~~~~~~~~~hG~--dGlg~~~~p~~-~~~~~~~~A~~~l~e~~~~~p~~vtivaiGPlTNlA 78 (263)
+||+|||||+|+++||... ......||. +|++....|.+ .....+++|+++|+++++++|++||||++|||||||
T Consensus 55 ~g~~dIPV~~Ga~~pl~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~A~~~i~~~~~~~~~~vtiva~GPLTNlA 132 (312)
T 2c40_A 55 FGKNTIEVAASNSRGKNPF--PKDWRMHAFYVDALPILNESGKVVTHVAAKPAHHHLIETLLQTEEKTTLLFTGPLTDLA 132 (312)
T ss_dssp HCCSCCCEEECCCCCSSCC--CHHHHTHHHHHHTCHHHHTTSCCCSCBCSSCHHHHHHHHHHHSSSCEEEEESSCSHHHH
T ss_pred cCCCCCCEecCCCccccCC--CcccccccccCCCcccCCCCCcccCCCCCccHHHHHHHHHHhCCCCEEEEEcCcHHHHH
Confidence 6899999999999999652 223345664 66653333322 233457899999999999999999999999999999
Q ss_pred HHHHhCcchhhccCcEEEeccccCCCCCCC-----ccccccccCCHHHHHHHHhcCCcEEEEcCccccccccCHHHHHHH
Q 024725 79 LAIKRDSSFASKVKNIVVLGGAFFALGNVN-----PAAEANIYGDPEAADVVFTSGANIAVVGINITTQVKLTDADFLEL 153 (263)
Q Consensus 79 ~al~~~P~~~~~i~~i~iMGG~~~~~Gn~~-----~~aE~N~~~DpeAA~~Vl~s~~~i~lvpldvt~~~~~~~~~~~~l 153 (263)
+|++++|++.++||+||||||++...||++ |.+|||||+|||||++||+|++|++|+|||+|+++.++++++++|
T Consensus 133 ~al~~~P~i~~~i~~iviMGGa~~~~GN~t~p~~~p~aEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~l 212 (312)
T 2c40_A 133 RALYEAPIIENKIKRLVWMGGTFRTAGNVHEPEHDGTAEWNSFWDPEAVARVWEANIEIDLITLESTNQVPLTIDIREQW 212 (312)
T ss_dssp HHHHHCGGGGGGEEEEEEECCCCSSCCSCCCTTCCSCCCHHHHHCHHHHHHHHHSSCCEEEECGGGGTTCBCCHHHHHHH
T ss_pred HHHHHChhHHhhcCEEEEeCCcccCCCCccCCCCCCcchhhhccCHHHHHHHHcCCCCEEEEccccccceecCHHHHHHH
Confidence 999999999999999999999998889997 899999999999999999999999999999999999999999999
Q ss_pred HhcC-ChhhHHHHHHHHHHHHhhhhcCCCCcccCchHHHHHHHhcCCceeeEeeeEEEEecCCcceeEEEecCCcccccC
Q 024725 154 RQSK-GRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVETQGICMGHTLMDQGLKRWNVS 232 (263)
Q Consensus 154 ~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~v~V~~~g~~~G~~~~d~~~~~~~~~ 232 (263)
.+.+ ++.++++.++++.|..+ ....+..++++||++|++++++|++|++++.+|+|+++|.+||+|+.|..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~lhD~lava~~~~p~l~~~~~~~v~V~~~g~~~G~tv~d~~------- 284 (312)
T 2c40_A 213 AKERKYIGIDFLGQCYAIVPPL-VHFAKNSTYYLWDVLTAAFVGKADLAKVQTINSIVHTYGPSQGRTVETDD------- 284 (312)
T ss_dssp HHTTTSHHHHHHHHHHHTSCCC---------CBCHHHHHHHHHHCGGGSEEEEEEEEECCSSTTTTCEEEEEE-------
T ss_pred HhcCCChHHHHHHHHHHhhhhh-hhhcccCCCcccCHHHHHHHcCccceeeEEEEEEEEeCCCCCceEEEecC-------
Confidence 8754 47788877765543110 00012357899999999999999999999999999999999999999852
Q ss_pred CCCCCCCCcEEEeecCHHHHHHHHHHHHhc
Q 024725 233 NPWTGYSPVSVAWTVNVDKVLNYIKRLLMK 262 (263)
Q Consensus 233 ~~~~~~~~v~v~~~vd~~~f~~~l~~~l~~ 262 (263)
+++++|+++||.++|+++|.++|.+
T Consensus 285 -----~~~~~v~~~vD~~~f~~~~~~~l~~ 309 (312)
T 2c40_A 285 -----GRPVHVVYDVNHDRFFDYITRLAKK 309 (312)
T ss_dssp -----EEEEEEEECCCHHHHHHHHHHHHC-
T ss_pred -----CCceEEEeecCHHHHHHHHHHHHhh
Confidence 2469999999999999999999875
No 8
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} SCOP: c.70.1.1 PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A*
Probab=100.00 E-value=2.3e-57 Score=411.48 Aligned_cols=247 Identities=22% Similarity=0.271 Sum_probs=207.3
Q ss_pred CCCCC----CeEeeCCCCCCCCCCCCCCCCccCCCCCCCCC-CCCC---------CCCCCCccHHHHHHHHHHcCCCceE
Q 024725 2 AGCPG----VPVAEGSPEPLKGGKPRVAEFAHGSDGMGNIS-LTPP---------KAKKCDKNASEFLVDKVSEYPGEVS 67 (263)
Q Consensus 2 ~gr~d----IPV~~G~~~pl~~~~~~~~~~~hG~dGlg~~~-~p~~---------~~~~~~~~A~~~l~e~~~~~p~~vt 67 (263)
+||+| ||||+|+.+|+.... .....||. |+++.. ++.+ ...+.+++|+++|+++++++|++||
T Consensus 68 ~g~~d~~~~IPV~~Ga~~pl~~~~--~~~~~~~~-~~~~~~~~~~~g~~~l~~~~~~~~~~~~A~~~i~~~~~~~~~~vt 144 (338)
T 3epw_A 68 MHNNMNLPLFPIGKSAATAVNPFP--KEWRCLAK-NMDDMPILNIPENVELWDKIKAENEKYEGQQLLADLVMNSEEKVT 144 (338)
T ss_dssp HHHHHCCCCCCEEECCCCCSSCCC--HHHHTHHH-HHHTCGGGCCHHHHHHHHHHHHHHHTSBHHHHHHHHHHHCSSCEE
T ss_pred hCCCCCCCccceEeCCCCCCCCCC--CcceeccC-cCCCCccCCcccccccCCCCCCccCCccHHHHHHHHHHhCCCceE
Confidence 56777 999999999997532 12234653 333221 1211 2233478999999999999999999
Q ss_pred EEEecchHHHHHHHHhC-cchhhccCcEEEeccccCCCCCCC-----ccccccccCCHHHHHHHHh-cCCcEEEEcCccc
Q 024725 68 ILALGPLTNLALAIKRD-SSFASKVKNIVVLGGAFFALGNVN-----PAAEANIYGDPEAADVVFT-SGANIAVVGINIT 140 (263)
Q Consensus 68 ivaiGPlTNlA~al~~~-P~~~~~i~~i~iMGG~~~~~Gn~~-----~~aE~N~~~DpeAA~~Vl~-s~~~i~lvpldvt 140 (263)
||++|||||||+|++++ |++.++|++||||||++...||++ |.+|||||+|||||++||+ |++|++|+|||+|
T Consensus 145 iva~GpLTNlA~al~~~gP~~~~~i~~iviMGG~~~~~GN~t~~~~~~~aEfN~~~DPeAA~~V~~~sg~~i~~vpLdvT 224 (338)
T 3epw_A 145 ICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAVDVRGNVFLPSTDGTAEWNIYWDPASAKTVFGCPGLRRIMFSLDST 224 (338)
T ss_dssp EEECSCTHHHHHHHHHHTHHHHTTEEEEEEECCCSSSCCSCCCTTSCSCCCHHHHHSHHHHHHHHTCTTCCEEEECHHHH
T ss_pred EEECCCchHHHHHHHHcCHHHHHhCCEEEEecCCCCCCCCccccCCCCcchhccccCHHHHHHHHhhcCCCEEEeCcccc
Confidence 99999999999999999 999999999999999998889998 7999999999999999999 9999999999999
Q ss_pred cccccCHHHHHHHHhcC-ChhhHHHHHHHHHHHHhhhhcCCCCcccCchHHHHHHHhcCCceeeEeeeEEEEe-cCCcce
Q 024725 141 TQVKLTDADFLELRQSK-GRYVQLLGDMCKFYRDWHVKSDGVHGIFLHDPVSFVALVRPDLFTFKKGVVRVET-QGICMG 218 (263)
Q Consensus 141 ~~~~~~~~~~~~l~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~v~V~~-~g~~~G 218 (263)
+++.++++++++|.+.+ ++.++|+.++++.|..+... .+..++++||++|++++++|++|++++.+|+|++ .|.+||
T Consensus 225 ~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~lhDplAva~~l~P~l~~~~~~~v~Ve~~~g~t~G 303 (338)
T 3epw_A 225 NTVPVRSPYVQRFGEQTNFLLSILVGTMWAMCTHCELL-RDGDGYYAWDALTAAYVVDQKVANVDPVPIDVVVDKQPNEG 303 (338)
T ss_dssp TTCBCCHHHHHGGGGGTTSHHHHHHHHHHHTTTTHHHH-STTCCCBCHHHHHHHHHHCGGGCEEEEEEEEECCSSSTTTT
T ss_pred cCccCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHhh-ccCCCCcCchHHHHHHHcCccceEEEEEEEEEEeCCCCCCc
Confidence 99999999999998754 57889888877665433222 2346889999999999999999999999999999 579999
Q ss_pred eEEEecCCcccccCCCCCCCCCcEEEeecCHHHHHHHHHHHHhc
Q 024725 219 HTLMDQGLKRWNVSNPWTGYSPVSVAWTVNVDKVLNYIKRLLMK 262 (263)
Q Consensus 219 ~~~~d~~~~~~~~~~~~~~~~~v~v~~~vd~~~f~~~l~~~l~~ 262 (263)
+|+.|... ..+|++|+++||.++|+++|+++|.+
T Consensus 304 ~Tv~d~~~----------~~~n~~V~~~vD~~~F~~~~~~~l~~ 337 (338)
T 3epw_A 304 ATVRTDAE----------NYPLTFVARNPEAEFFLDMLLRSARA 337 (338)
T ss_dssp CEEECCCT----------TCCEEEEEESCCHHHHHHHHHHHTTC
T ss_pred eEEEecCC----------CCCceEEeeccCHHHHHHHHHHHHhh
Confidence 99999642 24689999999999999999999864
No 9
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=97.44 E-value=0.00012 Score=67.52 Aligned_cols=53 Identities=23% Similarity=0.302 Sum_probs=47.9
Q ss_pred CCccHHHHHHHHHHcC-CCceEEEEecchHHHHHHHHhC---------cchhhccCcEEEeccc
Q 024725 47 CDKNASEFLVDKVSEY-PGEVSILALGPLTNLALAIKRD---------SSFASKVKNIVVLGGA 100 (263)
Q Consensus 47 ~~~~A~~~l~e~~~~~-p~~vtivaiGPlTNlA~al~~~---------P~~~~~i~~i~iMGG~ 100 (263)
.+.+|.++|++.+++. +.+|.|++.|.+||||.||.+. |+|.+|| +||+.||-
T Consensus 126 ~~s~gs~~Ii~~~~~~d~rPL~i~~wGG~n~lAqAL~~~~~~~~~~~~~~i~~kl-rvy~Ig~q 188 (437)
T 2yhg_A 126 KDSAGSNLIIAAVDKDDPRPVWATCWGGCNTIAQAVWKVQNTRSQAQLDAFISKL-RVYDILGQ 188 (437)
T ss_dssp CCCHHHHHHHHHHHSSCSSCEEEEESSCSHHHHHHHHHHHHHSCHHHHHHHHHTE-EEEEESCC
T ss_pred CCChHHHHHHHHHhCCCCCceEEEEecCHhHHHHHHHHhhhhcCcchhHHHhhcE-EEEEecCc
Confidence 3578999999999876 5789999999999999999998 9999999 79999885
No 10
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=30.20 E-value=72 Score=26.48 Aligned_cols=50 Identities=12% Similarity=0.280 Sum_probs=39.4
Q ss_pred CccHHHHHHHHHHcCCCceEEEEecchHHHHHHHHhCcchhhccCcEEEe
Q 024725 48 DKNASEFLVDKVSEYPGEVSILALGPLTNLALAIKRDSSFASKVKNIVVL 97 (263)
Q Consensus 48 ~~~A~~~l~e~~~~~p~~vtivaiGPlTNlA~al~~~P~~~~~i~~i~iM 97 (263)
...+...|.+.+...+..+.+|+++.-..+-..+..+|.+.+++..++-+
T Consensus 152 ~~~~~~~Ll~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~R~~~~i~~ 201 (309)
T 3syl_A 152 GQEAIEILLQVMENNRDDLVVILAGYADRMENFFQSNPGFRSRIAHHIEF 201 (309)
T ss_dssp THHHHHHHHHHHHHCTTTCEEEEEECHHHHHHHHHHSTTHHHHEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCCEEEEEeCChHHHHHHHhhCHHHHHhCCeEEEc
Confidence 45677888888888777889999988777777888899999998544443
Done!