BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>024728
MTSTPDPEEKLSSTLTEAPPSEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIY
HQPYVEYSPIDKPSNNPLEPVIHAFNNWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLT
AKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLC
FTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYMKIVTVEGHEFWFMGFVNFEKA
TNHLLNSLSEYRATGSAGRVGDQ

High Scoring Gene Products

Symbol, full name Information P value
AT5G13200 protein from Arabidopsis thaliana 5.2e-97
GEM
AT2G22475
protein from Arabidopsis thaliana 5.0e-44
FIP1
AT1G28200
protein from Arabidopsis thaliana 5.7e-43
AT5G23370 protein from Arabidopsis thaliana 2.6e-31
AT5G23360 protein from Arabidopsis thaliana 2.6e-31
AT5G08350 protein from Arabidopsis thaliana 3.0e-30
AT4G01600 protein from Arabidopsis thaliana 9.1e-29

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  024728
        (263 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2183901 - symbol:AT5G13200 "AT5G13200" species...   964  5.2e-97   1
TAIR|locus:505006267 - symbol:GEM "AT2G22475" species:370...   464  5.0e-44   1
TAIR|locus:2032185 - symbol:FIP1 "AT1G28200" species:3702...   454  5.7e-43   1
TAIR|locus:2166806 - symbol:AT5G23370 "AT5G23370" species...   344  2.6e-31   1
TAIR|locus:2166791 - symbol:AT5G23360 "AT5G23360" species...   344  2.6e-31   1
TAIR|locus:2150823 - symbol:AT5G08350 "AT5G08350" species...   334  3.0e-30   1
TAIR|locus:2133387 - symbol:AT4G01600 "AT4G01600" species...   320  9.1e-29   1


>TAIR|locus:2183901 [details] [associations]
            symbol:AT5G13200 "AT5G13200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0010286 "heat acclimation" evidence=RCA]
            Pfam:PF02893 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL391711
            EMBL:AL163491 InterPro:IPR004182 SMART:SM00568 HOGENOM:HOG000239286
            EMBL:BT010714 EMBL:BT012428 EMBL:AK229276 IPI:IPI00528201
            PIR:T48567 RefSeq:NP_196824.1 UniGene:At.25214 STRING:Q9LYV6
            PaxDb:Q9LYV6 PRIDE:Q9LYV6 DNASU:831159 EnsemblPlants:AT5G13200.1
            GeneID:831159 KEGG:ath:AT5G13200 TAIR:At5g13200 eggNOG:NOG289836
            InParanoid:Q9LYV6 OMA:PPEKYIQ PhylomeDB:Q9LYV6
            ProtClustDB:CLSN2686867 Genevestigator:Q9LYV6 Uniprot:Q9LYV6
        Length = 272

 Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
 Identities = 172/242 (71%), Positives = 210/242 (86%)

Query:    17 EAPPSEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQPYVEYSPIDKPS-N 75
             E   S  ++KKWGTH+MGAPA P AHPDNQ+AA+W A + QQ  +QPYV YSP++ P+ N
Sbjct:    28 EPSSSSPDQKKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQPYVIYSPVEHPTTN 87

Query:    76 NPLEPVIHAFNNWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQ 135
             NPLEPVI  F+ WS KAET+ARN+WHNLKTGPS+SE AWGKVNLTAKAIT+GGFESLF+Q
Sbjct:    88 NPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQ 147

Query:   136 IFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKV 195
             IF T+PNE LKKTFACYLSTTTGPVAGT+YLS ARVAFCSDRPL FTAPSGQE+WSYY+V
Sbjct:   148 IFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRV 207

Query:   196 MIPLANISSVNPVTLKENASDKYMKIVTVEGHEFWFMGFVNFEKATNHLLNSLSEYR-AT 254
             ++PLAN+++VNPV +KE   +KY+++ TV+GH+FWFMGFVN+EKAT+HLL S+S+++ A 
Sbjct:   208 VVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDFQTAH 267

Query:   255 GS 256
             GS
Sbjct:   268 GS 269


>TAIR|locus:505006267 [details] [associations]
            symbol:GEM "AT2G22475" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0010026 "trichome differentiation"
            evidence=IMP] [GO:0010482 "regulation of epidermal cell division"
            evidence=IMP] [GO:0048765 "root hair cell differentiation"
            evidence=IMP] [GO:0051567 "histone H3-K9 methylation" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0042732 "D-xylose metabolic
            process" evidence=RCA] Pfam:PF02893 GO:GO:0005829 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0051567 EMBL:AC006592 GO:GO:0048765
            InterPro:IPR004182 SMART:SM00568 GO:GO:0010482 GO:GO:0010026
            HOGENOM:HOG000239286 EMBL:EF490993 EMBL:AK118552 EMBL:AY087182
            IPI:IPI00525431 IPI:IPI00531015 RefSeq:NP_565538.1
            RefSeq:NP_973510.1 UniGene:At.19761 PaxDb:Q8S8F8 PRIDE:Q8S8F8
            EnsemblPlants:AT2G22475.1 GeneID:816780 KEGG:ath:AT2G22475
            TAIR:At2g22475 eggNOG:NOG242316 InParanoid:Q8S8F8 OMA:KPYACYL
            PhylomeDB:Q8S8F8 ProtClustDB:CLSN2688346 Genevestigator:Q8S8F8
            Uniprot:Q8S8F8
        Length = 299

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 96/243 (39%), Positives = 140/243 (57%)

Query:    13 STLTEAPPSEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQPYVEYSPIDK 72
             ST  +AP       K   H        S  PD + A+S +A +   I   P  E S  D 
Sbjct:    53 STPVKAPSRTSSGSKKSVHWSPELVSGSQEPDQKAASSSSAGSNPYIARSP-AETS--DA 109

Query:    73 PSNNPLEPVIHAFNNW-------STKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAIT 125
                + +E V      W       + K E++A N W +L+T PS ++AA G++  + K   
Sbjct:   110 SLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFA 169

Query:   126 EGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPS 185
             EGG+E +F+Q F TDP E+L  +FACYLST+ GPV G LY+S+A++A+CSD PL +    
Sbjct:   170 EGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKN-G 228

Query:   186 GQEAWSYYKVMIPLANISSVNPVTLKENASDKYMKIVTVEGHEFWFMGFVNFEKATNHLL 245
              Q  WSYYKV+IPL  + +VNP     N ++KY+++++V+ HEFWFMGF+N++ A   L 
Sbjct:   229 DQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQ 288

Query:   246 NSL 248
             +SL
Sbjct:   289 DSL 291


>TAIR|locus:2032185 [details] [associations]
            symbol:FIP1 "AT1G28200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0006623 "protein targeting to vacuole"
            evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
            [GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0016197
            "endosomal transport" evidence=RCA] Pfam:PF02893 EMBL:CP002684
            GenomeReviews:CT485782_GR InterPro:IPR004182 SMART:SM00568
            EMBL:AC021044 EMBL:AF174428 EMBL:AF370177 EMBL:AY056389
            EMBL:AY059137 EMBL:AY086994 IPI:IPI00542127 PIR:A86408
            RefSeq:NP_174141.1 UniGene:At.21796 STRING:Q9SE96 PaxDb:Q9SE96
            PRIDE:Q9SE96 EnsemblPlants:AT1G28200.1 GeneID:839714
            KEGG:ath:AT1G28200 TAIR:At1g28200 eggNOG:NOG276129
            HOGENOM:HOG000239286 InParanoid:Q9SE96 OMA:TTMPAES PhylomeDB:Q9SE96
            ProtClustDB:CLSN2914667 Genevestigator:Q9SE96 Uniprot:Q9SE96
        Length = 259

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 93/223 (41%), Positives = 131/223 (58%)

Query:    36 PAVPSAHPDNQKAASWNAENRQQIYHQPYVEYSPIDKPSNNPLEPVIHAFNNW------- 88
             P  P   P    A +  AE+       PYV  SP  +   N ++ V      W       
Sbjct:    45 PPPPQPIPTGAAATTMPAESN------PYVSPSPAPR---NTMDSVKDTLGKWGKMAADA 95

Query:    89 STKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKT 148
             + KAE +A N W +LKTGPSV++AA  ++    K + EGG+E +FKQ F   P+EKL KT
Sbjct:    96 TKKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKT 155

Query:   149 FACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPV 208
             +ACYLST+ GPV G +YLST ++AF SD PL +     Q  WSYYKV++P   + +VNP 
Sbjct:   156 YACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYKEGE-QTLWSYYKVVLPANQLKAVNPS 214

Query:   209 TLKENASDKYMKIVTVEGHEFWFMGFVNFEKATNHLLNSLSEY 251
             T + N SDKY+++++++ HEFWFMGFV +E A   L  ++  +
Sbjct:   215 TSRVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEAVQSH 257


>TAIR|locus:2166806 [details] [associations]
            symbol:AT5G23370 "AT5G23370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] Pfam:PF02893 EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR004182 SMART:SM00568 EMBL:AB007648 HOGENOM:HOG000239286
            ProtClustDB:CLSN2686137 IPI:IPI00523352 RefSeq:NP_197728.1
            UniGene:At.65542 EnsemblPlants:AT5G23370.1 GeneID:832401
            KEGG:ath:AT5G23370 TAIR:At5g23370 eggNOG:NOG264012
            InParanoid:Q9FMW4 OMA:QRCCKYM PhylomeDB:Q9FMW4
            Genevestigator:Q9FMW4 Uniprot:Q9FMW4
        Length = 219

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 77/207 (37%), Positives = 119/207 (57%)

Query:    57 QQIYHQPYVEYSPI----DKPSNNPLE-PVIHAFNNWSTKAETIARN---------IWHN 102
             QQ+   P V+ SP     D  S N L+ P    F+  + K +++ R          +   
Sbjct:     8 QQLITFPAVKTSPAGYLPDPASINKLQIPTSSKFSFLTGKGKSMLRKKKNDSFTNGVRDQ 67

Query:   103 LKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAG 162
              K GP ++E    K++L A+ +  GG E ++K++F     EKL K + CYLSTT GP+AG
Sbjct:    68 DKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAG 127

Query:   163 TLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYMKIV 222
              L++S+ ++AFCS+R +   +P G+    +YKV IPL  I+ VN        S KY+++V
Sbjct:   128 LLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVV 187

Query:   223 TVEGHEFWFMGFVNFEKATNHLLNSLS 249
             TV+G +FWFMGF++++KA N L  +LS
Sbjct:   188 TVDGFDFWFMGFLSYQKAFNCLEQALS 214


>TAIR|locus:2166791 [details] [associations]
            symbol:AT5G23360 "AT5G23360" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] Pfam:PF02893 EMBL:CP002688
            GenomeReviews:BA000015_GR InterPro:IPR004182 SMART:SM00568
            EMBL:AB007648 HOGENOM:HOG000239286 ProtClustDB:CLSN2686137
            EMBL:BT010826 EMBL:BT011297 IPI:IPI00519830 RefSeq:NP_197727.1
            UniGene:At.31014 EnsemblPlants:AT5G23360.1 GeneID:832400
            KEGG:ath:AT5G23360 TAIR:At5g23360 eggNOG:euNOG10112
            InParanoid:Q9FMW5 OMA:CYLSTTE PhylomeDB:Q9FMW5
            Genevestigator:Q9FMW5 Uniprot:Q9FMW5
        Length = 210

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 74/200 (37%), Positives = 115/200 (57%)

Query:    57 QQIYHQPYVEYSPI----DKPSNNPLE-PVIHAFNNWSTK-AETIARNIWHNLKTGPSVS 110
             QQ+   P V  +P+    D  S N L+ P     +    K  ++         K GP ++
Sbjct:     8 QQVIAFPAVNTAPVGYLPDPASINKLQIPTSSKVSMLQKKKTDSFTNGARDQDKLGPKLT 67

Query:   111 EAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTAR 170
             E    K++L AK +  GG E ++K++F     EKL K + CYLSTT G +AG L++S+ +
Sbjct:    68 ETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKK 127

Query:   171 VAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYMKIVTVEGHEFW 230
             +AFCS+R +  T+P G     +YKV IPL  I+ VN     +  S +Y+++VTV+ ++FW
Sbjct:   128 IAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFW 187

Query:   231 FMGFVNFEKATNHLLNSLSE 250
             FMGFV+++KA N L  +L+E
Sbjct:   188 FMGFVSYQKAFNCLEKALNE 207


>TAIR|locus:2150823 [details] [associations]
            symbol:AT5G08350 "AT5G08350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF02893 EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR004182 SMART:SM00568 EMBL:AL392174 HOGENOM:HOG000239286
            EMBL:AY085900 EMBL:AK118619 EMBL:BT004668 IPI:IPI00529042
            RefSeq:NP_196452.1 UniGene:At.32589 PaxDb:Q9FTA0 PRIDE:Q9FTA0
            EnsemblPlants:AT5G08350.1 GeneID:830733 KEGG:ath:AT5G08350
            TAIR:At5g08350 eggNOG:NOG235697 InParanoid:Q9FTA0 OMA:MAFCSER
            PhylomeDB:Q9FTA0 ProtClustDB:CLSN2686137 Genevestigator:Q9FTA0
            Uniprot:Q9FTA0
        Length = 222

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 64/159 (40%), Positives = 97/159 (61%)

Query:    91 KAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFA 150
             K +     +    K  P ++E    K++L A+ +  GG E +FK++F     EKL K + 
Sbjct:    55 KTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQ 114

Query:   151 CYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKVMIPLANISSVNPVTL 210
             CYLSTT GP+AG L++S+ ++AFCS+R +   +P G     +YKV IPL  I  VN    
Sbjct:   115 CYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQN 174

Query:   211 KENASDKYMKIVTVEGHEFWFMGFVNFEKATNHLLNSLS 249
              +  S KY+++VTV+G +FWFMGF++++KA N L  +LS
Sbjct:   175 TKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213


>TAIR|locus:2133387 [details] [associations]
            symbol:AT4G01600 "AT4G01600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] Pfam:PF02893 EMBL:CP002687
            GenomeReviews:CT486007_GR InterPro:IPR004182 SMART:SM00568
            EMBL:AL161492 HOGENOM:HOG000239286 EMBL:BT015153 EMBL:BT015662
            IPI:IPI00544293 IPI:IPI00656790 PIR:G85020 RefSeq:NP_001031570.1
            RefSeq:NP_192070.1 UniGene:At.34402 EnsemblPlants:AT4G01600.1
            GeneID:828085 KEGG:ath:AT4G01600 TAIR:At4g01600 eggNOG:NOG248358
            OMA:YISNRRI PhylomeDB:Q9M122 ProtClustDB:CLSN2685514
            Genevestigator:Q9M122 Uniprot:Q9M122
        Length = 233

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 74/202 (36%), Positives = 110/202 (54%)

Query:    60 YHQPYVEY-SPIDKPSNNPLEPVIHAFNNW-------STKAETIARNIWHNLKTGPSVSE 111
             Y  PYV   SP         + V+   N         + KAE +   +  +LK  PS+S+
Sbjct:    27 YDNPYVHITSPTSASDKRSKDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISD 86

Query:   112 AAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARV 171
             AA  +++   K I EGG E +F++ F     EKL  +F CY+STT+GPV G +Y+S  R+
Sbjct:    87 AAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRI 146

Query:   172 AFCSDRPLCF-TAPSGQEAWSYYKVMIPLANISSVNPVTLKENASDKYMKIVTVEGHEFW 230
             AFCSD  +   ++  G    +YYKV++    ISS++  T     S++Y+ +VT +G EFW
Sbjct:   147 AFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFW 206

Query:   231 FMGFVNFEKATNHLLNSLSEYR 252
             FMGFV++  A N L  +L   R
Sbjct:   207 FMGFVSYIDAFNCLNKALLNSR 228


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.127   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      263       263   0.00091  114 3  11 23  0.40    34
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  224 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.77u 0.10s 22.87t   Elapsed:  00:00:01
  Total cpu time:  22.77u 0.10s 22.87t   Elapsed:  00:00:01
  Start:  Mon May 20 18:13:51 2013   End:  Mon May 20 18:13:52 2013

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