Query 024730
Match_columns 263
No_of_seqs 40 out of 42
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 13:27:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024730.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024730hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kd8_A 2,3-bisphosphoglycerate 99.8 1.8E-19 6.1E-24 170.4 5.5 106 82-203 227-333 (399)
2 2zkt_A 2,3-bisphosphoglycerate 99.4 7.4E-13 2.5E-17 124.6 7.3 106 83-203 230-337 (412)
3 2i09_A Phosphopentomutase; str 97.6 3.2E-05 1.1E-09 73.8 4.1 75 118-203 252-331 (403)
4 3ot9_A Phosphopentomutase; alk 97.4 0.00013 4.5E-09 69.5 4.7 60 136-203 263-324 (399)
5 3igz_B Cofactor-independent ph 97.4 5.8E-05 2E-09 74.8 2.3 60 135-202 396-456 (561)
6 1o98_A 2,3-bisphosphoglycerate 96.2 0.0044 1.5E-07 60.6 5.2 109 86-202 313-434 (511)
7 1zed_A Alkaline phosphatase; p 95.2 0.0089 3E-07 58.1 2.9 60 134-202 285-347 (484)
8 3tg0_A Apase, alkaline phospha 91.8 0.067 2.3E-06 51.8 2.4 77 134-220 296-381 (449)
9 3m7v_A Phosphopentomutase; str 86.1 0.1 3.5E-06 44.7 -0.9 46 158-203 286-333 (413)
10 2w0y_A APH, alkaline phosphata 78.3 1 3.6E-05 43.8 2.7 56 134-200 270-332 (473)
11 3nkq_A Ectonucleotide pyrophos 70.3 3.2 0.00011 42.3 4.0 83 135-223 244-329 (831)
12 3q3q_A Alkaline phosphatase; h 68.2 2.1 7.2E-05 42.1 2.1 80 139-223 269-351 (565)
13 3szy_A Phosphonoacetate hydrol 64.6 5 0.00017 37.5 3.8 67 140-225 192-261 (427)
14 4gtw_A Ectonucleotide pyrophos 64.3 4.4 0.00015 40.9 3.6 80 135-220 244-326 (823)
15 2w5v_A Alkaline phosphatase; p 60.9 4 0.00014 36.6 2.3 58 138-202 232-290 (375)
16 2gso_A Phosphodiesterase-nucle 57.8 4 0.00014 36.1 1.8 61 136-201 140-203 (393)
17 3a52_A Cold-active alkaline ph 56.6 5.2 0.00018 37.7 2.4 60 135-201 197-257 (400)
18 2g2c_A Putative molybdenum cof 56.5 8.5 0.00029 31.3 3.4 55 95-167 4-76 (167)
19 3iwt_A 178AA long hypothetical 55.4 16 0.00054 29.5 4.8 49 105-170 42-91 (178)
20 3aon_B V-type sodium ATPase su 54.5 19 0.00066 28.4 5.0 55 95-171 1-55 (115)
21 1k7h_A Alkaline phosphatase; h 51.5 8.9 0.0003 37.2 3.2 61 134-202 284-346 (476)
22 1ei6_A Phosphonoacetate hydrol 51.4 12 0.0004 33.6 3.7 67 139-224 178-247 (406)
23 1y5e_A Molybdenum cofactor bio 51.2 19 0.00066 29.2 4.7 56 96-167 13-79 (169)
24 3gl9_A Response regulator; bet 47.3 32 0.0011 24.4 4.9 54 95-172 1-58 (122)
25 2d00_A V-type ATP synthase sub 40.8 41 0.0014 26.1 4.9 55 96-171 3-57 (109)
26 1mkz_A Molybdenum cofactor bio 39.2 33 0.0011 28.0 4.4 56 96-167 10-76 (172)
27 2gkg_A Response regulator homo 39.1 30 0.001 23.8 3.6 53 95-171 4-60 (127)
28 3kd8_A 2,3-bisphosphoglycerate 38.9 12 0.0004 35.5 1.8 35 7-41 6-51 (399)
29 1kgs_A DRRD, DNA binding respo 38.0 24 0.00081 27.7 3.2 54 95-172 1-58 (225)
30 3eod_A Protein HNR; response r 37.0 59 0.002 22.9 4.9 55 94-172 5-63 (130)
31 3l8h_A Putative haloacid dehal 36.7 53 0.0018 24.9 4.9 58 96-153 43-119 (179)
32 3f6p_A Transcriptional regulat 36.3 50 0.0017 23.2 4.5 54 95-172 1-58 (120)
33 2lpm_A Two-component response 36.2 38 0.0013 26.2 4.0 54 97-173 9-66 (123)
34 2zkt_A 2,3-bisphosphoglycerate 36.0 17 0.00057 34.1 2.3 37 5-41 4-51 (412)
35 3o1l_A Formyltetrahydrofolate 35.9 39 0.0013 30.6 4.7 25 99-123 136-160 (302)
36 2ov6_A V-type ATP synthase sub 35.1 44 0.0015 25.4 4.2 55 97-172 1-56 (101)
37 2qxy_A Response regulator; reg 34.7 90 0.0031 22.2 5.7 53 95-172 3-59 (142)
38 3m6m_D Sensory/regulatory prot 33.6 53 0.0018 24.0 4.3 57 92-172 10-70 (143)
39 1mvo_A PHOP response regulator 33.3 54 0.0019 23.2 4.2 54 95-172 2-59 (136)
40 1zgz_A Torcad operon transcrip 31.3 40 0.0014 23.4 3.2 54 95-172 1-58 (122)
41 2jba_A Phosphate regulon trans 30.1 68 0.0023 22.2 4.2 54 95-172 1-58 (127)
42 3lou_A Formyltetrahydrofolate 29.8 63 0.0022 29.0 5.0 25 99-123 126-150 (292)
43 3cg4_A Response regulator rece 29.3 95 0.0033 22.0 5.0 53 96-172 7-63 (142)
44 1qwj_A Cytidine monophospho-N- 28.7 2E+02 0.007 23.2 7.5 74 100-197 48-121 (229)
45 3n0v_A Formyltetrahydrofolate 28.6 64 0.0022 28.8 4.8 41 83-123 100-145 (286)
46 2pbq_A Molybdenum cofactor bio 28.5 33 0.0011 28.2 2.6 47 104-167 26-75 (178)
47 3kbq_A Protein TA0487; structu 28.0 31 0.0011 28.8 2.5 47 103-167 23-69 (172)
48 2is8_A Molybdopterin biosynthe 27.4 44 0.0015 26.9 3.2 49 103-167 21-69 (164)
49 2zay_A Response regulator rece 27.2 69 0.0024 23.0 4.0 54 95-172 7-64 (147)
50 3p94_A GDSL-like lipase; serin 26.8 81 0.0028 24.0 4.5 40 159-198 73-112 (204)
51 3i42_A Response regulator rece 26.3 1.1E+02 0.0038 21.3 4.8 51 98-172 5-59 (127)
52 1tmy_A CHEY protein, TMY; chem 25.9 38 0.0013 23.4 2.3 55 95-172 1-59 (120)
53 3dci_A Arylesterase; SGNH_hydr 25.6 1.9E+02 0.0066 23.0 6.8 40 159-199 100-139 (232)
54 3hzh_A Chemotaxis response reg 24.4 70 0.0024 23.7 3.6 58 91-172 31-95 (157)
55 3gt7_A Sensor protein; structu 24.3 1.4E+02 0.0047 21.9 5.2 53 96-172 7-63 (154)
56 3cnb_A DNA-binding response re 24.1 96 0.0033 21.8 4.2 53 96-172 8-66 (143)
57 2pjk_A 178AA long hypothetical 23.6 61 0.0021 26.7 3.4 47 105-167 42-88 (178)
58 2hi0_A Putative phosphoglycola 23.0 77 0.0026 25.1 3.8 57 95-153 125-183 (240)
59 2rdm_A Response regulator rece 22.5 1.6E+02 0.0056 20.3 5.1 52 97-172 6-62 (132)
60 3pzy_A MOG; ssgcid, seattle st 22.4 59 0.002 26.5 3.1 46 104-167 28-73 (164)
61 2qai_A V-type ATP synthase sub 22.4 70 0.0024 25.1 3.4 60 97-172 1-60 (111)
62 2oqr_A Sensory transduction pr 22.3 94 0.0032 24.4 4.2 54 95-172 3-60 (230)
63 2rjn_A Response regulator rece 21.7 1.7E+02 0.0058 21.2 5.3 53 96-172 7-63 (154)
64 1s8n_A Putative antiterminator 21.1 1.1E+02 0.0037 23.7 4.3 55 94-172 11-70 (205)
65 3c97_A Signal transduction his 21.1 65 0.0022 23.1 2.8 56 93-172 7-66 (140)
66 3hdg_A Uncharacterized protein 20.9 1E+02 0.0034 21.8 3.8 54 95-172 6-63 (137)
67 1mio_B Nitrogenase molybdenum 20.9 89 0.0031 29.1 4.3 107 49-169 271-394 (458)
68 3obi_A Formyltetrahydrofolate 20.5 98 0.0033 27.7 4.4 25 99-123 120-145 (288)
69 4ds3_A Phosphoribosylglycinami 20.4 89 0.0031 26.7 3.9 26 99-124 38-65 (209)
70 4g3h_A Arginase (ROCF); rossma 20.4 97 0.0033 28.0 4.3 56 94-171 181-236 (330)
71 2gwr_A DNA-binding response re 20.3 1.1E+02 0.0038 24.4 4.3 54 95-172 4-61 (238)
No 1
>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A
Probab=99.77 E-value=1.8e-19 Score=170.40 Aligned_cols=106 Identities=18% Similarity=0.216 Sum_probs=89.2
Q ss_pred cCCCCCCchhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcc
Q 024730 82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF 161 (263)
Q Consensus 82 ~~~~~ipt~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~f 161 (263)
.+.|.+|+|.||| |+|+|+|++.++++|+|+.+||+|+.++|+||..+| +|++|+++++++| ++|
T Consensus 227 G~~p~~~~f~e~~-gl~~~~Ia~~~l~~GLa~~aGm~~~~vpgatg~~dt----~~~~k~~~~i~~l----------~~~ 291 (399)
T 3kd8_A 227 GKVPAIPSFTEKN-RMKGACVVGSPWLKGLCRLLRMDVFDVPGATGTVGS----NYRGKIEKAVDLT----------SSH 291 (399)
T ss_dssp EECCCCCCHHHHH-SSCEEEECCCHHHHHHHHHTTCEEECCCC------C----CHHHHHHHHHHHT----------TTC
T ss_pred CcCCCCCChhHhh-CCcceEEecchHHHHHHHhCCCeeeeccCcCCCccc----cHHHHHHHHHHHH----------hhC
Confidence 4578899999999 999999999999999999999999999999999999 9999999999999 679
Q ss_pred cEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 024730 162 DLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPA 203 (263)
Q Consensus 162 DlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~g 203 (263)
||||+|++..|.++|.|+++.|++ ||.+|+.|++|++ .+++
T Consensus 292 d~v~~n~~~~D~~GH~gd~~~~~~aie~~D~~l~~i~~-l~~~ 333 (399)
T 3kd8_A 292 DFVLVNIKATDVAGHDGNYPLKRDVIEDIDRAMEPLKS-IGDH 333 (399)
T ss_dssp SEEEEEEECC------CCHHHHHHHHHHHHHTTGGGGS-CTTT
T ss_pred CEEEEEecCcchhhhccCHHHHHHHHHHHHHHHHHHHc-cCCC
Confidence 999999999999999999999999 9999999999998 6643
No 2
>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}
Probab=99.36 E-value=7.4e-13 Score=124.64 Aligned_cols=106 Identities=15% Similarity=0.273 Sum_probs=100.4
Q ss_pred CCCCCC-chhhhccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcc
Q 024730 83 EKSPFQ-TISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF 161 (263)
Q Consensus 83 ~~~~ip-t~sERFmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~f 161 (263)
..+.+| ++.|+| +.++++|+..++++|+|+.+||+++..+++|+..++ +++.++.++++.| +.+
T Consensus 230 ~~p~~~~~~~~~~-~~~~~~Va~~~l~~Gigk~~gmd~~~~~g~t~~~~~----~~~~~~~~~~~~l----------~~~ 294 (412)
T 2zkt_A 230 TYPNIPMKFTEQW-KVKAAGVIAVALVKGVARAVGFDVYTPEGATGEYNT----NEMAKAKKAVELL----------KDY 294 (412)
T ss_dssp CCCCCSSCHHHHH-TCCEEEECCSHHHHHHHHHTTCEEECCTTCCSSTTC----CHHHHHHHHHHHH----------HHC
T ss_pred CCCCCCccHHHHh-CcCcceEeeccccchhhhhcccceeeccCccCCCCC----CHHHHHHHHHHHh----------cCC
Confidence 568899 999999 999999999999999999999999999999999998 9999999999999 478
Q ss_pred cEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 024730 162 DLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQPA 203 (263)
Q Consensus 162 DlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~g 203 (263)
||||+|+...|.++|.|+...+.. ||++|+.|+.|+++.+..
T Consensus 295 d~v~v~~~~~D~~GH~~d~~~~~~aie~~D~~lg~ll~al~~~ 337 (412)
T 2zkt_A 295 DFVFLHFKPTDAAGHDNKPKLKAELIERADRMIGYILDHVDLE 337 (412)
T ss_dssp SEEEEEECHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred CEEEEcCccCChHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999 999999999999987763
No 3
>2i09_A Phosphopentomutase; structural genomics, target T1865, NYSGXRC, PSI, protein structure initiative; 2.00A {Streptococcus mutans} PDB: 3m7v_A
Probab=97.62 E-value=3.2e-05 Score=73.81 Aligned_cols=75 Identities=7% Similarity=0.046 Sum_probs=59.8
Q ss_pred eeeccCcccccC-CCCCCCChhHHHHHHHHHhccccCccccc-Ccc-cEEEEeeccCCc-cCcCCCcccccC-hHHHHHH
Q 024730 118 ATLQLNELIETS-DSLSGSPIDVVASELLKLLGLQRGKMEEV-SQF-DLVLVHIGAGEK-TNDDKGKAVAHD-LEYINAL 192 (263)
Q Consensus 118 ~V~~~~gl~g~~-ds~~~~~~~~~a~~alkLLGf~eg~~~~~-s~f-DlVFlHIka~d~-ashdG~~~~K~d-IE~iD~l 192 (263)
++|.-.|++... .+ .+.+..++++++.| +. ..+ ||||+|+...|. ++|.|+.+.+.. ||++|+.
T Consensus 252 Dif~g~GiT~~~~~~---~~~~e~~d~~i~~l--------~~~~~~~dfi~vn~~~~Dm~~GH~~d~~~y~~aIe~vD~~ 320 (403)
T 2i09_A 252 DIFNGSGITNDMGHN---KSNSHGVDTLIKTM--------GLSAFTKGFSFTNLVDFDALYGHRRNAHGYRDCLHEFDER 320 (403)
T ss_dssp HHTTTTTCSEECCCC---SSHHHHHHHHHHHH--------HCSSCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHHH
T ss_pred HeecCCCccccccCC---CCHHHHHHHHHHHH--------HhcCCCCCEEEEEeccCCcccCcCCCHHHHHHHHHHHHHH
Confidence 344445555443 33 25677899999999 33 346 999999999996 999999999999 9999999
Q ss_pred HHHHHHhcCCc
Q 024730 193 VRVILQMAQPA 203 (263)
Q Consensus 193 VG~Im~~a~~g 203 (263)
||+|++..+++
T Consensus 321 LG~Il~aL~~~ 331 (403)
T 2i09_A 321 LPEIIAAMKVD 331 (403)
T ss_dssp HHHHHHTCCTT
T ss_pred HHHHHHhhCCC
Confidence 99999998864
No 4
>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A
Probab=97.36 E-value=0.00013 Score=69.48 Aligned_cols=60 Identities=8% Similarity=0.024 Sum_probs=53.8
Q ss_pred ChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCc-cCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 024730 136 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TNDDKGKAVAHD-LEYINALVRVILQMAQPA 203 (263)
Q Consensus 136 ~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~-ashdG~~~~K~d-IE~iD~lVG~Im~~a~~g 203 (263)
+....++++++.| +...+||||+|+...|. ++|.++...... ||++|+.||+|++..+..
T Consensus 263 ~~~~~~d~~i~~L--------~~~~~dfv~vn~~~~D~~~GH~~~~~~Y~~aIe~vD~~IGrIL~~L~e~ 324 (399)
T 3ot9_A 263 SNMDGMDKLVDTL--------NMDFTGLSFLNLVDFDALFGHRRDPQGYGEALQEYDARLPEVFAKLKED 324 (399)
T ss_dssp SHHHHHHHHHHHH--------TSCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHTTHHHHHHHCCTT
T ss_pred ChHHHHHHHHHHH--------HhCCCCEEEEEecCCcccccccCCHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 5678899999999 33468999999999999 999999999998 999999999999998864
No 5
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A
Probab=97.36 E-value=5.8e-05 Score=74.82 Aligned_cols=60 Identities=7% Similarity=0.175 Sum_probs=54.0
Q ss_pred CChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730 135 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP 202 (263)
Q Consensus 135 ~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~ 202 (263)
-++..+++++++.| +..+|||||+|+..+|.++|.|+.+.+.. ||++|+.||+|++..+.
T Consensus 396 msa~ev~d~~i~al--------~~~~~DfI~vn~an~DmvGHtGd~~a~~kAIE~vD~~LGrIl~aL~e 456 (561)
T 3igz_B 396 MQSAAITEAAIEAL--------KSGMYNVVRINFPNGDMVGHTGDLKATITGVEAVDESLAKLKDAVDS 456 (561)
T ss_dssp TTHHHHHHHHHHHH--------HHSCCSEEEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH--------HhCCCCEEEEecCChhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 36788999999999 44579999999999999999999999999 99999999999998654
No 6
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=96.20 E-value=0.0044 Score=60.62 Aligned_cols=109 Identities=15% Similarity=0.165 Sum_probs=76.7
Q ss_pred CCCchhhhc--cccceeeeecCchhhhhhh---------hcCceeeccC-cccccCCCCCCCChhHHHHHHHHHhccccC
Q 024730 86 PFQTISDRF--MGLKAALITTNSRLKSFGD---------KLGFATLQLN-ELIETSDSLSGSPIDVVASELLKLLGLQRG 153 (263)
Q Consensus 86 ~ipt~sERF--mGmKAA~VTn~~likgfg~---------~lGf~V~~~~-gl~g~~ds~~~~~~~~~a~~alkLLGf~eg 153 (263)
..++|.|+. -|++.+.|+..+....+.- ..|++.+..+ ..+++.+....-.....+.++++.|
T Consensus 313 ~~~TL~E~L~~~Gy~~~~IaetekyahvtfF~nGg~~~~~~G~dr~l~~sp~v~tYDl~p~ms~~ev~d~ai~~L----- 387 (511)
T 1o98_A 313 LDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEI----- 387 (511)
T ss_dssp CCSCHHHHHHHTTCCEEEEEEGGGHHHHTTTTTTSCCSCCTTEEEEEECCCSCSSGGGSTTTTHHHHHHHHHHHH-----
T ss_pred ccchHHHHHHHCCCcEEEEecccccCceeeecCCCcccccCCCcceecccCcccccccCccccHHHHHHHHHHHH-----
Confidence 355666643 2888888887776666544 3455432222 1233333211234567889999998
Q ss_pred cccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730 154 KMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP 202 (263)
Q Consensus 154 ~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~ 202 (263)
+..++||+|+|....|..+|.++.+.... ||++|+.||++++..+.
T Consensus 388 ---~~~kpdfi~lnf~~pD~~GH~~~~~~y~~aIe~vD~~lGrll~~Lk~ 434 (511)
T 1o98_A 388 ---EADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILA 434 (511)
T ss_dssp ---HTTCCSEEEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HccCCcEEEEeCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23569999999999999999999888888 99999999999987653
No 7
>1zed_A Alkaline phosphatase; phosphoserine, substrate analog, hydro; HET: NAG PNP; 1.57A {Homo sapiens} SCOP: c.76.1.1 PDB: 1zeb_A* 1zef_A* 2glq_A* 3mk0_A* 3mk1_A* 3mk2_A* 1ew2_A*
Probab=95.18 E-value=0.0089 Score=58.10 Aligned_cols=60 Identities=8% Similarity=0.053 Sum_probs=54.1
Q ss_pred CCChhHHHHHHHHHhccccCcccccCcccEEEEeec--cCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730 134 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG--AGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP 202 (263)
Q Consensus 134 ~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIk--a~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~ 202 (263)
.+....++++++++|. +.+|.+||||+ ..|.++|+++...+.. ++.+|+.|+.+++..++
T Consensus 285 ~P~L~emt~~ai~~L~---------~~~~Gffl~veg~~iD~~gH~~d~~~~~~~~~~fD~al~~~~~~~~~ 347 (484)
T 1zed_A 285 DPSLMEMTEAALRLLS---------RNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTSE 347 (484)
T ss_dssp CCCHHHHHHHHHHHHT---------TCTTCEEEEEEETTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCCHHHHHHHHHHHHH---------hcCCcEEEEecccCcchhhhcCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5789999999999991 34899999999 8889999999999999 99999999999998765
No 8
>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...
Probab=91.83 E-value=0.067 Score=51.77 Aligned_cols=77 Identities=16% Similarity=0.156 Sum_probs=58.5
Q ss_pred CCChhHHHHHHHHHhccccCcccccCc-cc--EEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcC--Ccccc-
Q 024730 134 GSPIDVVASELLKLLGLQRGKMEEVSQ-FD--LVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQ--PATEV- 206 (263)
Q Consensus 134 ~~~~~~~a~~alkLLGf~eg~~~~~s~-fD--lVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~--~gs~i- 206 (263)
.+....+.+++|++| ++ ++ |+||+.+..|.++|+++...+.. ++.+|+.|+.+++... +-+-|
T Consensus 296 ~PsL~eMT~kAi~~L----------~~~~~GfFl~VEg~~iD~a~H~nd~~~~~~e~~~fD~av~~a~~~~~~~~dTLii 365 (449)
T 3tg0_A 296 VPTLAQMTDKAIELL----------SKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVI 365 (449)
T ss_dssp SCCHHHHHHHHHHHH----------TTCSSCEEEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCHHHHHHHHHHHH----------hhCCCcEEEEEeccccchhhccCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 467889999999999 33 44 67777788999999999999999 9999999999998765 22221
Q ss_pred --cceeEEEEEEeccc
Q 024730 207 --GSRLHLSVVLSYGQ 220 (263)
Q Consensus 207 --~srlhlsvvlsYG~ 220 (263)
|-+=|-..+++|+.
T Consensus 366 VTADH~~~~~~~g~~~ 381 (449)
T 3tg0_A 366 VTADHAHASQIVAPDT 381 (449)
T ss_dssp EECSSBCSCEEECTTC
T ss_pred EeCCCCCcccccCCCC
Confidence 23334445667764
No 9
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=86.10 E-value=0.1 Score=44.72 Aligned_cols=46 Identities=7% Similarity=0.011 Sum_probs=38.1
Q ss_pred cCcccEEEEeeccCCc-cCcCCCcccccC-hHHHHHHHHHHHHhcCCc
Q 024730 158 VSQFDLVLVHIGAGEK-TNDDKGKAVAHD-LEYINALVRVILQMAQPA 203 (263)
Q Consensus 158 ~s~fDlVFlHIka~d~-ashdG~~~~K~d-IE~iD~lVG~Im~~a~~g 203 (263)
...+++++.+....+. ..|.++.+...+ ||++|..||+||+.-++.
T Consensus 286 ~~~~~~~~~~~~~~d~~~~~~~~~~~y~~~i~~~D~~vg~~l~~L~en 333 (413)
T 3m7v_A 286 AFTKGFSFTNLVDFDALYGHRRNAHGYRDCLHEFDERLPEIIAAMKVD 333 (413)
T ss_dssp SCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred ccccccceecccccchhhhcchhHHHHHHHHHHHHhHHHHHHHhcCCC
Confidence 3667899988877664 578888888888 999999999999986653
No 10
>2w0y_A APH, alkaline phosphatase; hydrolase, halophilic; 1.7A {Halobacterium salinarum R1} PDB: 2x98_A
Probab=78.34 E-value=1 Score=43.82 Aligned_cols=56 Identities=20% Similarity=0.248 Sum_probs=49.5
Q ss_pred CCChhHHHHHHHHHhccccCcccccCcc---c---EEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhc
Q 024730 134 GSPIDVVASELLKLLGLQRGKMEEVSQF---D---LVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMA 200 (263)
Q Consensus 134 ~~~~~~~a~~alkLLGf~eg~~~~~s~f---D---lVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a 200 (263)
.+....+.++||++| ++. + |+||+.+..|.++|+++...... ++.+|+. +.+++.+
T Consensus 270 ~PsL~eMt~kAi~~L----------~k~~~~~~GfFLmVEg~~iD~agH~nd~~~~~~e~~~fD~a-~~a~~~~ 332 (473)
T 2w0y_A 270 QPNLDAMVDAGVDLL----------SSAGDPDKGFFLLVESGRVDHAGHANYPAQVAEQYEATQVA-GQLVEYA 332 (473)
T ss_dssp CCCHHHHHHHHHHHH----------CCSSCSSCCEEEEEEECSHHHHHHHTCTTHHHHHHHHHHHH-HHHHHHH
T ss_pred CCCHHHHHHHHHHHH----------HhcCCCCCCeEEEeeccccChhhccCCHHHHHHHHHHHHHH-HHHHHHH
Confidence 467888999999999 433 4 89999999999999999999999 9999999 9888865
No 11
>3nkq_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2; lysophospholipase D, autotaxin, ENPP2, lysophosphatidic acid hydrolase; HET: NAG BMA MAN NKQ; 1.70A {Mus musculus} PDB: 3nkm_A* 3nkn_A* 3nkp_A* 3nko_A* 3nkr_A* 2xrg_A* 2xr9_A*
Probab=70.32 E-value=3.2 Score=42.34 Aligned_cols=83 Identities=11% Similarity=0.056 Sum_probs=57.6
Q ss_pred CChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCccc---ccChHHHHHHHHHHHHhcCCcccccceeE
Q 024730 135 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAV---AHDLEYINALVRVILQMAQPATEVGSRLH 211 (263)
Q Consensus 135 ~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~---K~dIE~iD~lVG~Im~~a~~gs~i~srlh 211 (263)
..++..+.++++.|. ..+..+.+|+++|....|.++|.-.... ..-|++||..||.|++.-+. .-+..+.-
T Consensus 244 ~~~~~~v~~~~~~l~-----~~~~~~P~f~~ly~~~~D~~gH~~Gp~s~ey~~al~~vD~~IG~Ll~~Lk~-~GL~dnT~ 317 (831)
T 3nkq_A 244 IPHERRILTILQWLS-----LPDNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQ-LKLHRCVN 317 (831)
T ss_dssp SCHHHHHHHHHHHHT-----SCTTTCCSEEEEEEEEEHHHHHHHCTTCGGGHHHHHHHHHHHHHHHHHHHH-TTCTTTCE
T ss_pred CCHHHHHHHHHHHHh-----cccccCCceEEEecCCcchhccccCCCcHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCEE
Confidence 367888889998883 2234678999999999999888632222 22299999999999998543 22344556
Q ss_pred EEEEEecccccc
Q 024730 212 LSVVLSYGQVLE 223 (263)
Q Consensus 212 lsvvlsYG~~~~ 223 (263)
+.++=--|-+.-
T Consensus 318 VI~TSDHGm~~v 329 (831)
T 3nkq_A 318 VIFVGDHGMEDV 329 (831)
T ss_dssp EEEEESCCCEEC
T ss_pred EEEEcCCCCCCC
Confidence 666666775543
No 12
>3q3q_A Alkaline phosphatase; hydrolase; 1.95A {Sphingomonas SP}
Probab=68.17 E-value=2.1 Score=42.08 Aligned_cols=80 Identities=6% Similarity=0.080 Sum_probs=50.9
Q ss_pred HHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcC-C--CcccccChHHHHHHHHHHHHhcCCcccccceeEEEEE
Q 024730 139 VVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDD-K--GKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVV 215 (263)
Q Consensus 139 ~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashd-G--~~~~K~dIE~iD~lVG~Im~~a~~gs~i~srlhlsvv 215 (263)
.++..+.++| ++-+.-+....||+|+|....|..+|. | ..+....++++|+.||.+++..+.-- .+.-|.|+
T Consensus 269 ~v~~~A~~~l--~~~~l~~~~~pdll~vy~~~~D~~gH~~Gp~S~e~~~~l~~lD~~lg~Ll~~l~~~~---~~t~vivt 343 (565)
T 3q3q_A 269 MTLAFAAAAI--ENMQLGKQAQTDIISIGLSATDYVGHTFGTEGTESCIQVDRLDTELGAFFDKLDKDG---IDYVVVLT 343 (565)
T ss_dssp HHHHHHHHHH--HHTTTTSSSSCEEEEEEECHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHHTT---CCEEEEEE
T ss_pred HHHHHHHHHH--HhcccCCCCCCCEEEEEcCCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcC---CCEEEEEE
Confidence 3455555555 111222335789999999999999997 2 22333339999999999998753210 25556666
Q ss_pred Eecccccc
Q 024730 216 LSYGQVLE 223 (263)
Q Consensus 216 lsYG~~~~ 223 (263)
--+|-...
T Consensus 344 SDHG~~~~ 351 (565)
T 3q3q_A 344 ADHGGHDL 351 (565)
T ss_dssp CSCCCCCC
T ss_pred cCCCCCCC
Confidence 66676543
No 13
>3szy_A Phosphonoacetate hydrolase; alkaline phosphatase superfamily; 1.35A {Sinorhizobium meliloti} SCOP: c.76.1.0 PDB: 3szz_A 3t00_A 3t01_A 3t02_A
Probab=64.63 E-value=5 Score=37.54 Aligned_cols=67 Identities=12% Similarity=0.083 Sum_probs=46.5
Q ss_pred HHHHHHHHhccccCcccccCcccEEEEeeccCCccCcC-CCc--ccccChHHHHHHHHHHHHhcCCcccccceeEEEEEE
Q 024730 140 VASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDD-KGK--AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVL 216 (263)
Q Consensus 140 ~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashd-G~~--~~K~dIE~iD~lVG~Im~~a~~gs~i~srlhlsvvl 216 (263)
.+..+++++ +..++||+++| ..|.++|. |-. +....++++|++|+.+++. ...|.|+=
T Consensus 192 ~~~~a~~~~--------~~~~p~l~y~~--~~D~~gH~~G~~s~~~~~~~~~~D~~l~~l~~~---------~~~vivts 252 (427)
T 3szy_A 192 VFAAGVKLL--------REFRPDIMYLT--TTDYVQHKYAPGVPEANSFYEMFDRYLAELDGL---------GAAIVVTA 252 (427)
T ss_dssp HHHHHHHHH--------HHTCCSEEEEE--CCCHHHHHCCTTSHHHHHHHHHHHHHHHHHHHT---------TCEEEEEC
T ss_pred HHHHHHHHH--------HhcCCCEEEEc--ccchhhccCCCCcHHHHHHHHHHHHHHHHHHhC---------CCEEEEEc
Confidence 455666666 44678887765 78889986 532 2323399999999999986 24566666
Q ss_pred ecccccccC
Q 024730 217 SYGQVLEAD 225 (263)
Q Consensus 217 sYG~~~~~~ 225 (263)
-+|......
T Consensus 253 DHGm~~~~~ 261 (427)
T 3szy_A 253 DHGMKPKHK 261 (427)
T ss_dssp SCCCEECBC
T ss_pred CCCccccCc
Confidence 688776553
No 14
>4gtw_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2, alkaline phosphodiesterase...; bone mineralization, hydrolase; HET: NAG BMA MAN AMP; 2.70A {Mus musculus} PDB: 4gtx_A* 4gty_A* 4gtz_A* 4b56_A*
Probab=64.28 E-value=4.4 Score=40.89 Aligned_cols=80 Identities=14% Similarity=0.239 Sum_probs=53.8
Q ss_pred CChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCc---ccccChHHHHHHHHHHHHhcCCcccccceeE
Q 024730 135 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK---AVAHDLEYINALVRVILQMAQPATEVGSRLH 211 (263)
Q Consensus 135 ~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~---~~K~dIE~iD~lVG~Im~~a~~gs~i~srlh 211 (263)
..++..+.++++.|. ..+....+|+++|....|..+|.-.. +....|+++|+.||.+++.-+. .-+..+..
T Consensus 244 ~~~~~~~~~~~~~l~-----~~~~~~P~fl~~y~~~pD~~gH~~Gp~s~e~~~~i~~vD~~IG~ll~~L~~-~gl~dnT~ 317 (823)
T 4gtw_A 244 VPFEERILAVLEWLQ-----LPSHERPHFYTLYLEEPDSSGHSHGPVSSEVIKALQKVDRLVGMLMDGLKD-LGLDKCLN 317 (823)
T ss_dssp SCHHHHHHHHHHHTT-----SCTTTCCSEEEEEECTTHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHH-TTCTTSCE
T ss_pred CCHHHHHHHHHHHHH-----hcccCCCeEEEECCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCeE
Confidence 467788899999883 33457889999999999988775221 1122289999999999887432 11344555
Q ss_pred EEEEEeccc
Q 024730 212 LSVVLSYGQ 220 (263)
Q Consensus 212 lsvvlsYG~ 220 (263)
+.++---|-
T Consensus 318 VI~tSDHGm 326 (823)
T 4gtw_A 318 LILISDHGM 326 (823)
T ss_dssp EEEECSCCC
T ss_pred EEEEcCCCC
Confidence 555544453
No 15
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=60.94 E-value=4 Score=36.65 Aligned_cols=58 Identities=5% Similarity=0.061 Sum_probs=38.8
Q ss_pred hHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730 138 DVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP 202 (263)
Q Consensus 138 ~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~ 202 (263)
...++++++.|. + ..+.-|+++.-...|..+|.++...... |+++|..||+|++..+.
T Consensus 232 ~~~~~~ai~~i~--~-----~~kpFfl~~~~~~~d~~~h~~~~~~~~~~v~~~D~~vG~il~~L~~ 290 (375)
T 2w5v_A 232 SAATDLAIQFLS--K-----DNSAFFIMSEGSQIDWGGHANNASYLISEINDFDDAIGTALAFAKK 290 (375)
T ss_dssp HHHHHHHHHHHT--G-----GGCCEEEEEEETTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh--h-----CCCceEEEeecCcCChhhcCccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 356788888881 1 1222355555445566677776665455 99999999999997654
No 16
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP, hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A 2gsu_A* 2rh6_A*
Probab=57.80 E-value=4 Score=36.15 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=42.2
Q ss_pred ChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcc--cccC-hHHHHHHHHHHHHhcC
Q 024730 136 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKA--VAHD-LEYINALVRVILQMAQ 201 (263)
Q Consensus 136 ~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~--~K~d-IE~iD~lVG~Im~~a~ 201 (263)
..+..+.++++.|. -.+..+.+|+++|..+.+...|.-... .-.. ++++|+.||.|++.-+
T Consensus 140 ~~~~~~~~a~~~l~-----~~~~~~P~fl~~~~~~~d~~~h~~g~~~~~y~~~i~~~D~~ig~ll~~L~ 203 (393)
T 2gso_A 140 RLDTRVDAVRGWLA-----TDGAQRNRLVTLYFEHVDEAGHDHGPESRQYADAVRAVDAAIGRLLAGMQ 203 (393)
T ss_dssp CHHHHHHHHHHHHH-----CCGGGCEEEEEEEECHHHHHHHHHCTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-----ccCCCCCeEEEEecCCCCccccccCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888882 112356799999999888766531111 1122 9999999999998754
No 17
>3a52_A Cold-active alkaline phosphatase; hydrolase; 2.20A {Shewanella}
Probab=56.62 E-value=5.2 Score=37.69 Aligned_cols=60 Identities=17% Similarity=0.226 Sum_probs=48.7
Q ss_pred CChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcC
Q 024730 135 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQ 201 (263)
Q Consensus 135 ~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~ 201 (263)
+......++||++|- + ..+-| |+||--+.-|.++|.++...... +..+|+.|+.+++.++
T Consensus 197 PsL~emT~kAI~~L~----k--n~~GF-FLmVEgg~ID~a~H~nd~~~al~e~~~fD~AV~~al~~~~ 257 (400)
T 3a52_A 197 NTLSKLTQKSLDLLS----Q--NEKGF-VLLVEGSLIDWAGHNNDIATAMAEMQGFANAIEVVEQYIR 257 (400)
T ss_dssp CHHHHHHHHHHHHHT----T--CTTCE-EEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH----h--CCCCe-EEEecCccCchhhhhCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445677999999991 0 11111 89999999999999999999888 9999999999999877
No 18
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=56.46 E-value=8.5 Score=31.29 Aligned_cols=55 Identities=15% Similarity=0.248 Sum_probs=32.3
Q ss_pred cccceeeee-------------cCchhhhh----hhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccc
Q 024730 95 MGLKAALIT-------------TNSRLKSF----GDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEE 157 (263)
Q Consensus 95 mGmKAA~VT-------------n~~likgf----g~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~ 157 (263)
|-||+++|| |.+.|... -+.+|++|... ..++ + +.+...+.+-+++
T Consensus 4 m~~~v~Ii~~GdEl~~G~i~D~n~~~l~~~~~~~l~~~G~~v~~~-~iv~---D----d~~~I~~~l~~a~--------- 66 (167)
T 2g2c_A 4 MHIKSAIIVVSDRISTGTRENKALPLLQRLMSDELQDYSYELISE-VVVP---E----GYDTVVEAIATAL--------- 66 (167)
T ss_dssp CEEEEEEEEECHHHHHTSSCCCHHHHHHHHHCC----CEEEEEEE-EEEC---S----SHHHHHHHHHHHH---------
T ss_pred CccEEEEEEECCcccCCceeccHHHHHHHhHHhHHHHCCCEEeEE-EEeC---C----CHHHHHHHHHHHH---------
Confidence 456666664 55677777 78889988653 2222 2 4555555555566
Q ss_pred cC-cccEEEEe
Q 024730 158 VS-QFDLVLVH 167 (263)
Q Consensus 158 ~s-~fDlVFlH 167 (263)
+ ++|+|+.=
T Consensus 67 -~~~~DlVitt 76 (167)
T 2g2c_A 67 -KQGARFIITA 76 (167)
T ss_dssp -HTTCSEEEEE
T ss_pred -hCCCCEEEEC
Confidence 4 48999764
No 19
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=55.42 E-value=16 Score=29.54 Aligned_cols=49 Identities=12% Similarity=0.208 Sum_probs=30.8
Q ss_pred CchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHH-HhccccCcccccCcccEEEEeecc
Q 024730 105 NSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLK-LLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 105 ~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alk-LLGf~eg~~~~~s~fDlVFlHIka 170 (263)
.++|...-+.+|++|.... .++ |....+.++++ ++ ..+++|+|+.==+.
T Consensus 42 g~~L~~~L~~~G~~v~~~~-iV~--------Dd~~~i~~al~~~~--------a~~~~DlVittGG~ 91 (178)
T 3iwt_A 42 GDIIKQLLIENGHKIIGYS-LVP--------DDKIKILKAFTDAL--------SIDEVDVIISTGGT 91 (178)
T ss_dssp HHHHHHHHHHTTCEEEEEE-EEC--------SCHHHHHHHHHHHH--------TCTTCCEEEEESCC
T ss_pred HHHHHHHHHHCCCEEEEEE-EeC--------CCHHHHHHHHHHHH--------hcCCCCEEEecCCc
Confidence 3578899999999996542 222 33444555554 43 33678999986443
No 20
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=54.49 E-value=19 Score=28.37 Aligned_cols=55 Identities=9% Similarity=0.254 Sum_probs=38.8
Q ss_pred cccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccC
Q 024730 95 MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAG 171 (263)
Q Consensus 95 mGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~ 171 (263)
|-||-|+|.+...+.|| +.+|++++.+ + + ...+.++++-| .+. ++-.|+++=...
T Consensus 1 m~mKiaVIGD~Dtv~GF-rLaGie~~~v--------~----~-~ee~~~~~~~l-------~~~-digIIlIte~ia 55 (115)
T 3aon_B 1 MTYKIGVVGDKDSVSPF-RLFGFDVQHG--------T----T-KTEIRKTIDEM-------AKN-EYGVIYITEQCA 55 (115)
T ss_dssp CEEEEEEESCHHHHGGG-GGGTCEEECC--------C----S-HHHHHHHHHHH-------HHT-TEEEEEEEHHHH
T ss_pred CceEEEEEECHHHHHHH-HHcCCeEEEe--------C----C-HHHHHHHHHHH-------Hhc-CceEEEEeHHHH
Confidence 77899999999999998 6889988644 1 2 23455555555 133 788999985543
No 21
>1k7h_A Alkaline phosphatase; hydrolase, transferase, phosphomonoester, extended beta SHEE triad, metal triad; HET: NAG; 1.92A {Pandalus borealis} SCOP: c.76.1.1 PDB: 1shq_A* 1shn_A*
Probab=51.51 E-value=8.9 Score=37.16 Aligned_cols=61 Identities=13% Similarity=0.172 Sum_probs=52.6
Q ss_pred CCChhHHHHHHHHHhccccCcccccCccc-EEEEeeccCCccCcCCCcccccC-hHHHHHHHHHHHHhcCC
Q 024730 134 GSPIDVVASELLKLLGLQRGKMEEVSQFD-LVLVHIGAGEKTNDDKGKAVAHD-LEYINALVRVILQMAQP 202 (263)
Q Consensus 134 ~~~~~~~a~~alkLLGf~eg~~~~~s~fD-lVFlHIka~d~ashdG~~~~K~d-IE~iD~lVG~Im~~a~~ 202 (263)
.+....+.+++|++|- ...-= |+||.-...|.++|..+...... ++.+|+.|+.+++..++
T Consensus 284 ~PsL~eMT~~ai~~L~--------~~~~GFfl~vE~~~iD~~gH~~d~~~~~~e~~~fD~av~~~~~~~~~ 346 (476)
T 1k7h_A 284 DPTLPEMTKVAIEMLT--------KDENGFFLLVEGGRIDHMHHANQIRQSLAETLDMEEAVSMALSMTDP 346 (476)
T ss_dssp SCCHHHHHHHHHHHHT--------TCTTCEEEEEEECHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCCHHHHHHHHHHHHH--------hCCCceEEEecccccchhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5688899999999992 11223 99999999999999999999999 99999999999999876
No 22
>1ei6_A Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A {Pseudomonas fluorescens} SCOP: c.76.1.4
Probab=51.40 E-value=12 Score=33.58 Aligned_cols=67 Identities=10% Similarity=0.132 Sum_probs=44.0
Q ss_pred HHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCCcc--cccC-hHHHHHHHHHHHHhcCCcccccceeEEEEE
Q 024730 139 VVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKA--VAHD-LEYINALVRVILQMAQPATEVGSRLHLSVV 215 (263)
Q Consensus 139 ~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~~~--~K~d-IE~iD~lVG~Im~~a~~gs~i~srlhlsvv 215 (263)
..+..+++++ +..+.|| +|+...|..+|.-... .-.+ ++++|+.||.|++. +.-+.++
T Consensus 178 ~~~~~a~~~i--------~~~~p~f--ly~~~~D~~gH~~g~~s~~~~~~l~~lD~~lg~ll~~---------~t~vivt 238 (406)
T 1ei6_A 178 FVFAAGLSLL--------TNERPDF--MYLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQ---------GAIVAIT 238 (406)
T ss_dssp HHHHHHHHHH--------HTTCCSE--EEEECCCHHHHHSCTTSHHHHHHHHHHHHHHHHHHHT---------TCEEEEE
T ss_pred HHHHHHHHHH--------hcCCCeE--EEeCCcchhhccCCCCcHHHHHHHHHHHHHHHHHHhC---------CCEEEEE
Confidence 3556666676 2356777 5677888888764321 1223 99999999999987 4445555
Q ss_pred Eeccccccc
Q 024730 216 LSYGQVLEA 224 (263)
Q Consensus 216 lsYG~~~~~ 224 (263)
=-.|.+...
T Consensus 239 SDHG~~~~~ 247 (406)
T 1ei6_A 239 ADHGMNAKT 247 (406)
T ss_dssp CSCCCEECB
T ss_pred eCCCCccCC
Confidence 557766544
No 23
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=51.23 E-value=19 Score=29.19 Aligned_cols=56 Identities=14% Similarity=0.294 Sum_probs=36.4
Q ss_pred ccceeeee-----------cCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEE
Q 024730 96 GLKAALIT-----------TNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLV 164 (263)
Q Consensus 96 GmKAA~VT-----------n~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlV 164 (263)
.+|+++|| |.+.|...-+.+|++|... +.++ . +.+...+.+-+++ +..++|+|
T Consensus 13 ~~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~-~iv~---D----d~~~i~~~l~~~~--------~~~~~DlV 76 (169)
T 1y5e_A 13 EVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSY-EIVK---D----DKESIQQAVLAGY--------HKEDVDVV 76 (169)
T ss_dssp CCEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEE-EEEC---S----SHHHHHHHHHHHH--------TCTTCSEE
T ss_pred CCEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEE-EEeC---C----CHHHHHHHHHHHH--------hcCCCCEE
Confidence 46677765 5678888889999998653 2222 2 4555556555666 11278999
Q ss_pred EEe
Q 024730 165 LVH 167 (263)
Q Consensus 165 FlH 167 (263)
+.=
T Consensus 77 itt 79 (169)
T 1y5e_A 77 LTN 79 (169)
T ss_dssp EEE
T ss_pred EEc
Confidence 764
No 24
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=47.34 E-value=32 Score=24.44 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=33.8
Q ss_pred cccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|..|-.+|-+++. ++.+-+..|++|.... + ..++++.+ ...++|+||+-+.+
T Consensus 1 m~~~ILivdd~~~~~~~l~~~l~~~g~~v~~~~-------~---------~~~al~~l--------~~~~~dlvllD~~~ 56 (122)
T 3gl9_A 1 MSKKVLLVDDSAVLRKIVSFNLKKEGYEVIEAE-------N---------GQIALEKL--------SEFTPDLIVLXIMM 56 (122)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHHTTCEEEEES-------S---------HHHHHHHH--------TTBCCSEEEECSCC
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHCCcEEEEeC-------C---------HHHHHHHH--------HhcCCCEEEEeccC
Confidence 4455566666553 3444556788885432 1 35677777 34679999999887
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 57 p~ 58 (122)
T 3gl9_A 57 PV 58 (122)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 25
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=40.82 E-value=41 Score=26.06 Aligned_cols=55 Identities=22% Similarity=0.229 Sum_probs=39.1
Q ss_pred ccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccC
Q 024730 96 GLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAG 171 (263)
Q Consensus 96 GmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~ 171 (263)
.||-|+|.+...+.|| +.+|++++.+. + ...+.++++-| .+.+++..|+++=...
T Consensus 3 ~mkiaVIgD~dtv~GF-rLaGi~~~~v~------------~-~ee~~~~~~~l-------~~~~digIIlIte~~a 57 (109)
T 2d00_A 3 PVRMAVIADPETAQGF-RLAGLEGYGAS------------S-AEEAQSLLETL-------VERGGYALVAVDEALL 57 (109)
T ss_dssp CCCEEEEECHHHHHHH-HHTTSEEEECS------------S-HHHHHHHHHHH-------HHHCCCSEEEEETTTC
T ss_pred ccEEEEEeCHHHHHHH-HHcCCeEEEeC------------C-HHHHHHHHHHH-------hhCCCeEEEEEeHHHH
Confidence 4899999999999998 68899987441 1 23444555544 2446899999986544
No 26
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=39.25 E-value=33 Score=27.96 Aligned_cols=56 Identities=11% Similarity=0.257 Sum_probs=35.9
Q ss_pred ccceeeee-----------cCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEE
Q 024730 96 GLKAALIT-----------TNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLV 164 (263)
Q Consensus 96 GmKAA~VT-----------n~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlV 164 (263)
.||+++|| |.+.|...-+.+|++|... ..++ . +.+...+.+-+++ +...+|+|
T Consensus 10 ~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~-~iv~---D----d~~~i~~~l~~a~--------~~~~~DlV 73 (172)
T 1mkz_A 10 PTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDK-AIVK---E----NRYAIRAQVSAWI--------ASDDVQVV 73 (172)
T ss_dssp CCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEE-EEEC---S----CHHHHHHHHHHHH--------HSSSCCEE
T ss_pred CCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEE-EEeC---C----CHHHHHHHHHHHH--------hcCCCCEE
Confidence 56788776 5578888889999998653 2222 2 4555555555566 11148999
Q ss_pred EEe
Q 024730 165 LVH 167 (263)
Q Consensus 165 FlH 167 (263)
+.=
T Consensus 74 itt 76 (172)
T 1mkz_A 74 LIT 76 (172)
T ss_dssp EEE
T ss_pred EeC
Confidence 764
No 27
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=39.06 E-value=30 Score=23.83 Aligned_cols=53 Identities=17% Similarity=0.290 Sum_probs=32.5
Q ss_pred cccceeeeecCc----hhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNS----RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~----likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|.+|-.+|.+.+ .++..-+..|+.|..... ..++++.+ ...++|+|++-+..
T Consensus 4 m~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~----------------~~~a~~~~--------~~~~~dlvi~d~~~ 59 (127)
T 2gkg_A 4 MSKKILIVESDTALSATLRSALEGRGFTVDETTD----------------GKGSVEQI--------RRDRPDLVVLAVDL 59 (127)
T ss_dssp --CEEEEECSCHHHHHHHHHHHHHHTCEEEEECC----------------HHHHHHHH--------HHHCCSEEEEESBC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhcCceEEEecC----------------HHHHHHHH--------HhcCCCEEEEeCCC
Confidence 567777887776 344455557888743221 24556666 23568999998876
Q ss_pred C
Q 024730 171 G 171 (263)
Q Consensus 171 ~ 171 (263)
.
T Consensus 60 ~ 60 (127)
T 2gkg_A 60 S 60 (127)
T ss_dssp G
T ss_pred C
Confidence 5
No 28
>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A
Probab=38.94 E-value=12 Score=35.48 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=28.3
Q ss_pred ceEEEecCCcccccCCC-----------ccchhhhhhcccccceec
Q 024730 7 KALVLYGDGLARFVEPS-----------HAHLHSLASKAACGFLSL 41 (263)
Q Consensus 7 R~LVlygdG~a~~v~p~-----------h~hlhslAs~~sCgFLsl 41 (263)
+-++|-+||++..--|. .-|++.||+.|.||.+.-
T Consensus 6 K~i~ii~DG~~D~p~~~l~gkTpLe~A~tP~lD~lA~~g~~Gl~~~ 51 (399)
T 3kd8_A 6 SIILIVLDGLGDRPGSDLQNRTPLQAAFRPNLNWLASHGINGIMHP 51 (399)
T ss_dssp EEEEEEEESCCCCCBGGGTSBCHHHHSCCHHHHHHHHTSEEEEEEC
T ss_pred eEEEEEecCCCCCcchhcCCCCchhhcCCccHHHHHhcCccCceec
Confidence 67899999999654331 569999999999999865
No 29
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=38.04 E-value=24 Score=27.72 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=32.4
Q ss_pred cccceeeeecCchh----hhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSRL----KSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~li----kgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|.||-.+|.+.+.+ +.+-...|+.|.... + ..++++++ ...++|+|++-+..
T Consensus 1 M~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-------~---------~~~a~~~~--------~~~~~dlvllD~~l 56 (225)
T 1kgs_A 1 MNVRVLVVEDERDLADLITEALKKEMFTVDVCY-------D---------GEEGMYMA--------LNEPFDVVILDIML 56 (225)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHTTCEEEEES-------S---------HHHHHHHH--------HHSCCSEEEEESCC
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHCCCEEEEEC-------C---------HHHHHHHH--------hcCCCCEEEEeCCC
Confidence 67888888887743 333444677774321 1 23455555 23568999988877
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 57 ~~ 58 (225)
T 1kgs_A 57 PV 58 (225)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 30
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=36.99 E-value=59 Score=22.86 Aligned_cols=55 Identities=22% Similarity=0.295 Sum_probs=34.7
Q ss_pred ccccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeec
Q 024730 94 FMGLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG 169 (263)
Q Consensus 94 FmGmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIk 169 (263)
++++|-.+|.+.+. ++.+-+..|+.|.... + ..++++++ ...+||+||+-+.
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-------~---------~~~a~~~l--------~~~~~dlvi~d~~ 60 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAA-------D---------GVDALELL--------GGFTPDLMICDIA 60 (130)
T ss_dssp TTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEES-------C---------HHHHHHHH--------TTCCCSEEEECCC
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHhCCceEEEeC-------C---------HHHHHHHH--------hcCCCCEEEEecC
Confidence 34677788877764 4455566788875421 1 34677777 3467999999887
Q ss_pred cCC
Q 024730 170 AGE 172 (263)
Q Consensus 170 a~d 172 (263)
..+
T Consensus 61 l~~ 63 (130)
T 3eod_A 61 MPR 63 (130)
T ss_dssp ---
T ss_pred CCC
Confidence 664
No 31
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=36.74 E-value=53 Score=24.94 Aligned_cols=58 Identities=9% Similarity=0.113 Sum_probs=34.5
Q ss_pred ccceeeeecCch-----------------hhhhhhhcC--ceeeccCcccccCCCCCCCChhHHHHHHHHHhccccC
Q 024730 96 GLKAALITTNSR-----------------LKSFGDKLG--FATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRG 153 (263)
Q Consensus 96 GmKAA~VTn~~l-----------------ikgfg~~lG--f~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg 153 (263)
|++-+++||.+. +..+-+.+| |+.+-..-..+..+....-+......++++.+|+...
T Consensus 43 g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 119 (179)
T 3l8h_A 43 DWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLA 119 (179)
T ss_dssp TCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCT
T ss_pred CCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 789999999975 355666788 6653311111111111123455678899999987544
No 32
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=36.31 E-value=50 Score=23.20 Aligned_cols=54 Identities=22% Similarity=0.236 Sum_probs=33.9
Q ss_pred cccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|+.|-.+|-+.+. ++.+-+..|+.|.... + ..++++++ ...+||+||+-+.+
T Consensus 1 m~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-------~---------~~~al~~~--------~~~~~dlii~D~~~ 56 (120)
T 3f6p_A 1 MDKKILVVDDEKPIADILEFNLRKEGYEVHCAH-------D---------GNEAVEMV--------EELQPDLILLDIML 56 (120)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTCEEEEES-------S---------HHHHHHHH--------HTTCCSEEEEETTS
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhCCEEEEEeC-------C---------HHHHHHHH--------hhCCCCEEEEeCCC
Confidence 4556666666654 3344456688774321 1 34667777 34679999999887
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 57 p~ 58 (120)
T 3f6p_A 57 PN 58 (120)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 33
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=36.16 E-value=38 Score=26.21 Aligned_cols=54 Identities=19% Similarity=0.333 Sum_probs=34.7
Q ss_pred cceeeeecCc----hhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccCC
Q 024730 97 LKAALITTNS----RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE 172 (263)
Q Consensus 97 mKAA~VTn~~----likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d 172 (263)
||--+|=+.+ .++.+-+..|++|+. .-.+ ..+|++++ ...+||+||+-+.+.+
T Consensus 9 ~rILiVdD~~~~~~~l~~~L~~~G~~v~~------~a~~---------g~eAl~~~--------~~~~~DlvllDi~mP~ 65 (123)
T 2lpm_A 9 LRVLVVEDESMIAMLIEDTLCELGHEVAA------TASR---------MQEALDIA--------RKGQFDIAIIDVNLDG 65 (123)
T ss_dssp CCEEEESSSTTTSHHHHHHHHHHCCCCCB------CSCC---------HHHHHHHH--------HHCCSSEEEECSSSSS
T ss_pred CEEEEEeCCHHHHHHHHHHHHHCCCEEEE------EECC---------HHHHHHHH--------HhCCCCEEEEecCCCC
Confidence 4555555444 345556678888731 1111 35677777 4578999999999986
Q ss_pred c
Q 024730 173 K 173 (263)
Q Consensus 173 ~ 173 (263)
.
T Consensus 66 ~ 66 (123)
T 2lpm_A 66 E 66 (123)
T ss_dssp C
T ss_pred C
Confidence 3
No 34
>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}
Probab=35.99 E-value=17 Score=34.07 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=30.2
Q ss_pred CcceEEEecCCcccccCCC-----------ccchhhhhhcccccceec
Q 024730 5 PSKALVLYGDGLARFVEPS-----------HAHLHSLASKAACGFLSL 41 (263)
Q Consensus 5 PSR~LVlygdG~a~~v~p~-----------h~hlhslAs~~sCgFLsl 41 (263)
+.+-++|-+||++..--|. .-||+.||..|.||.+--
T Consensus 4 ~~k~i~~i~DG~~d~p~~~l~~~TpL~~A~tP~ld~la~~g~~G~~~~ 51 (412)
T 2zkt_A 4 KRKGLLIILDGLGDRPIKELNGLTPLEYANTPNMDKLAEIGILGQQDP 51 (412)
T ss_dssp CCEEEEEEETTBBCCCBGGGTTBCHHHHSCCHHHHHHHHHSEEEEEES
T ss_pred cceEEEEEecCCCCCcccccCCCChhhhcCCchHHHHHhcCcccceec
Confidence 4478999999999765332 579999999999998865
No 35
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=35.88 E-value=39 Score=30.60 Aligned_cols=25 Identities=16% Similarity=0.240 Sum_probs=22.7
Q ss_pred eeeeecCchhhhhhhhcCceeeccC
Q 024730 99 AALITTNSRLKSFGDKLGFATLQLN 123 (263)
Q Consensus 99 AA~VTn~~likgfg~~lGf~V~~~~ 123 (263)
.++|||.+.++.+|++.|..++.++
T Consensus 136 ~~Visn~~~~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 136 ACVISNHQDLRSMVEWHDIPYYHVP 160 (302)
T ss_dssp EEEEESSSTTHHHHHTTTCCEEECC
T ss_pred EEEEECcHHHHHHHHHcCCCEEEcC
Confidence 6789999999999999999998875
No 36
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, hydrolase; NMR {Methanosarcina mazei}
Probab=35.09 E-value=44 Score=25.44 Aligned_cols=55 Identities=13% Similarity=0.193 Sum_probs=37.1
Q ss_pred cceeeeecCchhhhhhhhcCce-eeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccCC
Q 024730 97 LKAALITTNSRLKSFGDKLGFA-TLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE 172 (263)
Q Consensus 97 mKAA~VTn~~likgfg~~lGf~-V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d 172 (263)
||-|+|.+...+.|| +.+|++ |+.+. +. ..+.++++-| .+.+++-.|+++=...+
T Consensus 1 MkiaVIGD~dtv~GF-rLaGi~~v~~v~------------~~-ee~~~~~~~l-------~~~~digIIlite~~a~ 56 (101)
T 2ov6_A 1 MELAVIGKSEFVTGF-RLAGISKVYETP------------DI-PATESAVRSV-------LEDKSVGILVMHNDDIG 56 (101)
T ss_dssp CCEEEEECHHHHHHH-HHHTCCEEEECC------------ST-TTHHHHHHHH-------HHHTSSSEEEEEHHHHT
T ss_pred CEEEEEECHHHHHHH-HHcCCCceEecC------------CH-HHHHHHHHHH-------hhCCCeEEEEEcHHHHH
Confidence 789999999999988 678998 76441 11 1233444433 13468999999876544
No 37
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=34.67 E-value=90 Score=22.23 Aligned_cols=53 Identities=19% Similarity=0.290 Sum_probs=33.4
Q ss_pred cccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|.+|-.+|.+.+. ++.+-+..|+.|..... ..++++++ ....+|+||+-+ .
T Consensus 3 ~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~----------------~~~a~~~l--------~~~~~dlvi~d~-~ 57 (142)
T 2qxy_A 3 LTPTVMVVDESRITFLAVKNALEKDGFNVIWAKN----------------EQEAFTFL--------RREKIDLVFVDV-F 57 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHGGGTCEEEEESS----------------HHHHHHHH--------TTSCCSEEEEEC-T
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhCCCEEEEECC----------------HHHHHHHH--------hccCCCEEEEeC-C
Confidence 3456677777653 34445567888743221 35677777 345799999998 6
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 58 ~~ 59 (142)
T 2qxy_A 58 EG 59 (142)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 38
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=33.58 E-value=53 Score=24.04 Aligned_cols=57 Identities=19% Similarity=0.342 Sum_probs=33.5
Q ss_pred hhccccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEe
Q 024730 92 DRFMGLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH 167 (263)
Q Consensus 92 ERFmGmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlH 167 (263)
.+.++||-.+|-+++. ++.+-...|+.|..+. + ..++++++ ...+||+||+-
T Consensus 10 ~~~~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~-------~---------~~~al~~~--------~~~~~dlvl~D 65 (143)
T 3m6m_D 10 ARVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVN-------G---------AEQVLDAM--------AEEDYDAVIVD 65 (143)
T ss_dssp -----CEEEEECSSHHHHHHHHHHHHC--CEEEEES-------S---------HHHHHHHH--------HHSCCSEEEEE
T ss_pred cccccceEEEEeCCHHHHHHHHHHHHHcCCeEEEeC-------C---------HHHHHHHH--------hcCCCCEEEEe
Confidence 3456788888888764 4444456688774321 1 24566666 33679999999
Q ss_pred eccCC
Q 024730 168 IGAGE 172 (263)
Q Consensus 168 Ika~d 172 (263)
+.+.+
T Consensus 66 ~~mp~ 70 (143)
T 3m6m_D 66 LHMPG 70 (143)
T ss_dssp SCCSS
T ss_pred CCCCC
Confidence 98775
No 39
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=33.30 E-value=54 Score=23.15 Aligned_cols=54 Identities=19% Similarity=0.284 Sum_probs=33.3
Q ss_pred cccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|+.|-.+|.+++. ++.+-...|+.|.... + ..++++++ ...++|+||+-+..
T Consensus 2 m~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-------~---------~~~a~~~~--------~~~~~dlvl~D~~l 57 (136)
T 1mvo_A 2 MNKKILVVDDEESIVTLLQYNLERSGYDVITAS-------D---------GEEALKKA--------ETEKPDLIVLDVML 57 (136)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTCEEEEES-------S---------HHHHHHHH--------HHHCCSEEEEESSC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCcEEEEec-------C---------HHHHHHHH--------hhcCCCEEEEecCC
Confidence 6677777777764 3344445688764321 1 24455555 23568999998887
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 58 ~~ 59 (136)
T 1mvo_A 58 PK 59 (136)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 40
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=31.30 E-value=40 Score=23.36 Aligned_cols=54 Identities=20% Similarity=0.370 Sum_probs=31.2
Q ss_pred cccceeeeecCc----hhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNS----RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~----likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|.+|-.+|-+.+ .++.+-...|+.|.... + ..++++++ ...++|+||+-+..
T Consensus 1 m~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~-------~---------~~~~~~~~--------~~~~~dlvi~d~~l 56 (122)
T 1zgz_A 1 MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTA-------S---------GAGLREIM--------QNQSVDLILLDINL 56 (122)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHTTCEEEEES-------S---------HHHHHHHH--------HHSCCSEEEEESCC
T ss_pred CCcEEEEEECCHHHHHHHHHHHHHCCCeEEEec-------C---------HHHHHHHH--------hcCCCCEEEEeCCC
Confidence 445666666665 33444445677763221 1 23456666 23569999999887
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 57 ~~ 58 (122)
T 1zgz_A 57 PD 58 (122)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 41
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=30.10 E-value=68 Score=22.25 Aligned_cols=54 Identities=13% Similarity=0.142 Sum_probs=32.7
Q ss_pred cccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|.+|-.+|-+.+. ++.+-+..|+.|.... + ..++++++ ...++|+|++-+..
T Consensus 1 m~~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~-------~---------~~~a~~~~--------~~~~~dlvi~D~~l 56 (127)
T 2jba_A 1 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAE-------D---------YDSAVNQL--------NEPWPDLILLAWML 56 (127)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEC-------S---------HHHHHTTC--------SSSCCSEEEEESEE
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHCCceEEEeC-------C---------HHHHHHHH--------hccCCCEEEEecCC
Confidence 4566666766663 4444455688774321 1 34566666 34579999998877
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 57 ~~ 58 (127)
T 2jba_A 57 PG 58 (127)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 42
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=29.77 E-value=63 Score=29.00 Aligned_cols=25 Identities=4% Similarity=0.274 Sum_probs=22.5
Q ss_pred eeeeecCchhhhhhhhcCceeeccC
Q 024730 99 AALITTNSRLKSFGDKLGFATLQLN 123 (263)
Q Consensus 99 AA~VTn~~likgfg~~lGf~V~~~~ 123 (263)
.++|||.+.++.+|++.|-.++.++
T Consensus 126 ~~Visn~~~~~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 126 VGIVSNHPDFAPLAAQHGLPFRHFP 150 (292)
T ss_dssp EEEEESSSTTHHHHHHTTCCEEECC
T ss_pred EEEEeCcHHHHHHHHHcCCCEEEeC
Confidence 6789999999999999999998765
No 43
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=29.26 E-value=95 Score=22.01 Aligned_cols=53 Identities=15% Similarity=0.249 Sum_probs=33.2
Q ss_pred ccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccC
Q 024730 96 GLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAG 171 (263)
Q Consensus 96 GmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~ 171 (263)
.++-.+|.+.+. ++.+-+..|+.|..... ..++++++ ....+|+||+-+...
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~----------------~~~a~~~l--------~~~~~dlii~d~~l~ 62 (142)
T 3cg4_A 7 KGDVMIVDDDAHVRIAVKTILSDAGFHIISADS----------------GGQCIDLL--------KKGFSGVVLLDIMMP 62 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESS----------------HHHHHHHH--------HTCCCEEEEEESCCS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCeEEEEeCC----------------HHHHHHHH--------HhcCCCEEEEeCCCC
Confidence 456667776653 44444556887743221 34667776 335699999998876
Q ss_pred C
Q 024730 172 E 172 (263)
Q Consensus 172 d 172 (263)
+
T Consensus 63 ~ 63 (142)
T 3cg4_A 63 G 63 (142)
T ss_dssp S
T ss_pred C
Confidence 4
No 44
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=28.66 E-value=2e+02 Score=23.22 Aligned_cols=74 Identities=11% Similarity=0.077 Sum_probs=42.3
Q ss_pred eeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccCCccCcCCC
Q 024730 100 ALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG 179 (263)
Q Consensus 100 A~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d~ashdG~ 179 (263)
.++|+...+..+++..|..++..++-..+... .-......+++.+ .+.|.|++|-+..
T Consensus 48 vv~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~----~~~~~v~~al~~~----------~~~d~vlv~~~D~-------- 105 (229)
T 1qwj_A 48 WVSTDHDEIENVAKQFGAQVHRRSSETSKDSS----TSLDAIVEFLNYH----------NEVDIVGNIQATS-------- 105 (229)
T ss_dssp EEEESCHHHHHHHHHTTCEEEECCGGGSSTTC----CHHHHHHHHHTTC----------TTCSEEEEECTTC--------
T ss_pred EEECChHHHHHHHHHcCCEEEeChhhhcCCCC----cHHHHHHHHHHhc----------CCCCEEEEecCCC--------
Confidence 34566667777777788887654432111111 1123345566655 3468888886532
Q ss_pred cccccChHHHHHHHHHHH
Q 024730 180 KAVAHDLEYINALVRVIL 197 (263)
Q Consensus 180 ~~~K~dIE~iD~lVG~Im 197 (263)
.=++-+.|++++....
T Consensus 106 --Pli~~~~i~~l~~~~~ 121 (229)
T 1qwj_A 106 --PCLHPTDLQKVAEMIR 121 (229)
T ss_dssp --TTCCHHHHHHHHHHHH
T ss_pred --CcCCHHHHHHHHHHHH
Confidence 2334578888887654
No 45
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=28.65 E-value=64 Score=28.84 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=29.2
Q ss_pred CCCCCCchhhhcc-c-c---ceeeeecCchhhhhhhhcCceeeccC
Q 024730 83 EKSPFQTISDRFM-G-L---KAALITTNSRLKSFGDKLGFATLQLN 123 (263)
Q Consensus 83 ~~~~ipt~sERFm-G-m---KAA~VTn~~likgfg~~lGf~V~~~~ 123 (263)
+...++.|-+|+- | + =.++|||.+.++.+|++.|..++.++
T Consensus 100 ~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 100 ADHCLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPYYHFA 145 (286)
T ss_dssp CCHHHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCEEECC
T ss_pred CCCCHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeC
Confidence 3444555555541 1 1 26789999999999999999998764
No 46
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=28.46 E-value=33 Score=28.17 Aligned_cols=47 Identities=15% Similarity=0.293 Sum_probs=29.2
Q ss_pred cCchhhhhhh---hcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEe
Q 024730 104 TNSRLKSFGD---KLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH 167 (263)
Q Consensus 104 n~~likgfg~---~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlH 167 (263)
|.+.|...-+ .+|++| .. ..++. +.+...+.+-+++ +..++|+|+.=
T Consensus 26 n~~~l~~~l~~l~~~G~~v-~~-~iv~D-------d~~~I~~~l~~~~--------~~~~~DlVitt 75 (178)
T 2pbq_A 26 SGKAIIDYLKDVIITPFEV-EY-RVIPD-------ERDLIEKTLIELA--------DEKGCSLILTT 75 (178)
T ss_dssp HHHHHHHHHHHHBCSCCEE-EE-EEECS-------CHHHHHHHHHHHH--------HTSCCSEEEEE
T ss_pred hHHHHHHHHHHHHhCCCEE-EE-EEcCC-------CHHHHHHHHHHHH--------hcCCCCEEEEC
Confidence 4466777776 899998 54 34442 4555555555666 11268999764
No 47
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=27.99 E-value=31 Score=28.83 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=30.7
Q ss_pred ecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEe
Q 024730 103 TTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH 167 (263)
Q Consensus 103 Tn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlH 167 (263)
||.+.|....+.+|++|.... .++ . +.+...+.+-+++ .++|+||.-
T Consensus 23 tN~~~l~~~L~~~G~~v~~~~-iv~---D----d~~~I~~~l~~a~----------~~~DlVitt 69 (172)
T 3kbq_A 23 TNAAFIGNFLTYHGYQVRRGF-VVM---D----DLDEIGWAFRVAL----------EVSDLVVSS 69 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE-EEC---S----CHHHHHHHHHHHH----------HHCSEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEE-EeC---C----CHHHHHHHHHHHH----------hcCCEEEEc
Confidence 356678888899999986543 222 2 4455555555666 568999974
No 48
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=27.35 E-value=44 Score=26.90 Aligned_cols=49 Identities=16% Similarity=0.182 Sum_probs=31.0
Q ss_pred ecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEe
Q 024730 103 TTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH 167 (263)
Q Consensus 103 Tn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlH 167 (263)
||.+.|...-+.+|++|.... .++ . +.+...+.+-+++ +..++|+|+.=
T Consensus 21 ~n~~~l~~~l~~~G~~v~~~~-iv~---D----d~~~i~~~l~~~~--------~~~~~DlVitt 69 (164)
T 2is8_A 21 TTHLAIREVLAGGPFEVAAYE-LVP---D----EPPMIKKVLRLWA--------DREGLDLILTN 69 (164)
T ss_dssp CHHHHHHHHHTTSSEEEEEEE-EEC---S----CHHHHHHHHHHHH--------HTSCCSEEEEE
T ss_pred chHHHHHHHHHHCCCeEeEEE-EcC---C----CHHHHHHHHHHHH--------hcCCCCEEEEc
Confidence 356788888999999886532 222 2 4555555555666 11168999764
No 49
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=27.23 E-value=69 Score=23.01 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=33.4
Q ss_pred cccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
+++|-.+|.+.+. ++..-+..|+.|..... ..++++++ ...+||+||+-+..
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~~g~~v~~~~~----------------~~~a~~~l--------~~~~~dlii~d~~l 62 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQEGFDIIQCGN----------------AIEAVPVA--------VKTHPHLIITEANM 62 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHHHTEEEEEESS----------------HHHHHHHH--------HHHCCSEEEEESCC
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCC----------------HHHHHHHH--------HcCCCCEEEEcCCC
Confidence 3677777777653 34444557888753221 24556666 23469999999887
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 63 ~~ 64 (147)
T 2zay_A 63 PK 64 (147)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 50
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=26.82 E-value=81 Score=24.02 Aligned_cols=40 Identities=8% Similarity=0.110 Sum_probs=25.4
Q ss_pred CcccEEEEeeccCCccCcCCCcccccChHHHHHHHHHHHH
Q 024730 159 SQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQ 198 (263)
Q Consensus 159 s~fDlVFlHIka~d~ashdG~~~~K~dIE~iD~lVG~Im~ 198 (263)
.+.|+|+++++.-|.....+......-.+.+.++|..+..
T Consensus 73 ~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~ 112 (204)
T 3p94_A 73 LKPKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKA 112 (204)
T ss_dssp GCEEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 4579999999977765433222223336677777776654
No 51
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.25 E-value=1.1e+02 Score=21.28 Aligned_cols=51 Identities=16% Similarity=0.346 Sum_probs=31.7
Q ss_pred ceeeeecCc----hhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccCC
Q 024730 98 KAALITTNS----RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE 172 (263)
Q Consensus 98 KAA~VTn~~----likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d 172 (263)
|-.+|-+.+ .++.+-+..|+.|..+.. ..++++++ ...+||+||+-+...+
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~----------------~~~a~~~l--------~~~~~dlii~D~~l~~ 59 (127)
T 3i42_A 5 QALIVEDYQAAAETFKELLEMLGFQADYVMS----------------GTDALHAM--------STRGYDAVFIDLNLPD 59 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTEEEEEESS----------------HHHHHHHH--------HHSCCSEEEEESBCSS
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCCCEEEECC----------------HHHHHHHH--------HhcCCCEEEEeCCCCC
Confidence 444555444 455555667887744321 34566666 3366999999988765
No 52
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=25.94 E-value=38 Score=23.44 Aligned_cols=55 Identities=18% Similarity=0.272 Sum_probs=32.7
Q ss_pred cccceeeeecCchh----hhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSRL----KSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~li----kgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|++|-.+|-+.+.+ +..-+..|+.|+. ...+ ..++++++ ...++|+||+-+..
T Consensus 1 m~~~ilivdd~~~~~~~l~~~l~~~g~~vv~------~~~~---------~~~a~~~~--------~~~~~dlil~D~~l 57 (120)
T 1tmy_A 1 MGKRVLIVDDAAFMRMMLKDIITKAGYEVAG------EATN---------GREAVEKY--------KELKPDIVTMDITM 57 (120)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHHTTCEEEE------EESS---------HHHHHHHH--------HHHCCSEEEEECSC
T ss_pred CCceEEEEcCcHHHHHHHHHHHhhcCcEEEE------EECC---------HHHHHHHH--------HhcCCCEEEEeCCC
Confidence 67787777777643 3344456777421 1111 34566666 23468999998887
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 58 ~~ 59 (120)
T 1tmy_A 58 PE 59 (120)
T ss_dssp GG
T ss_pred CC
Confidence 54
No 53
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=25.60 E-value=1.9e+02 Score=23.00 Aligned_cols=40 Identities=13% Similarity=0.267 Sum_probs=25.4
Q ss_pred CcccEEEEeeccCCccCcCCCcccccChHHHHHHHHHHHHh
Q 024730 159 SQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQM 199 (263)
Q Consensus 159 s~fDlVFlHIka~d~ashdG~~~~K~dIE~iD~lVG~Im~~ 199 (263)
+++|+|||.++.-|.....+ .....-.+.+.++|..+...
T Consensus 100 ~p~d~VvI~~GtND~~~~~~-~~~~~~~~~l~~li~~ir~~ 139 (232)
T 3dci_A 100 MPLDLVIIMLGTNDIKPVHG-GRAEAAVSGMRRLAQIVETF 139 (232)
T ss_dssp CSCSEEEEECCTTTTSGGGT-SSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEeccCCCccccC-CCHHHHHHHHHHHHHHHHHh
Confidence 56799999999777544321 11111167777888777665
No 54
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=24.39 E-value=70 Score=23.69 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=36.9
Q ss_pred hhhccccceeeeecCch----hhhhhhhcCceee-ccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccC--cccE
Q 024730 91 SDRFMGLKAALITTNSR----LKSFGDKLGFATL-QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVS--QFDL 163 (263)
Q Consensus 91 sERFmGmKAA~VTn~~l----ikgfg~~lGf~V~-~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s--~fDl 163 (263)
...-|.+|-.+|-+++. ++.+-+..|+.|+ .... ..++++++ ... +||+
T Consensus 31 ~~~~~~~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~----------------~~~al~~l--------~~~~~~~dl 86 (157)
T 3hzh_A 31 YDTGIPFNVLIVDDSVFTVKQLTQIFTSEGFNIIDTAAD----------------GEEAVIKY--------KNHYPNIDI 86 (157)
T ss_dssp TTTTEECEEEEECSCHHHHHHHHHHHHHTTCEEEEEESS----------------HHHHHHHH--------HHHGGGCCE
T ss_pred CCCCCceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEECC----------------HHHHHHHH--------HhcCCCCCE
Confidence 34446788888888765 3444455688874 2221 34556666 223 7899
Q ss_pred EEEeeccCC
Q 024730 164 VLVHIGAGE 172 (263)
Q Consensus 164 VFlHIka~d 172 (263)
||+-+...+
T Consensus 87 iilD~~l~~ 95 (157)
T 3hzh_A 87 VTLXITMPK 95 (157)
T ss_dssp EEECSSCSS
T ss_pred EEEeccCCC
Confidence 999988765
No 55
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=24.34 E-value=1.4e+02 Score=21.95 Aligned_cols=53 Identities=17% Similarity=0.330 Sum_probs=34.4
Q ss_pred ccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccC
Q 024730 96 GLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAG 171 (263)
Q Consensus 96 GmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~ 171 (263)
++|-.+|-+++. ++.+-+..|+.|.... + ..++++++ ...+||+||+-+...
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~-------~---------~~~al~~l--------~~~~~dlii~D~~l~ 62 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEETGYQTEHVR-------N---------GREAVRFL--------SLTRPDLIISDVLMP 62 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEEES-------S---------HHHHHHHH--------TTCCCSEEEEESCCS
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHCCCEEEEeC-------C---------HHHHHHHH--------HhCCCCEEEEeCCCC
Confidence 356667766654 4445556688874332 1 35677777 346799999998876
Q ss_pred C
Q 024730 172 E 172 (263)
Q Consensus 172 d 172 (263)
+
T Consensus 63 ~ 63 (154)
T 3gt7_A 63 E 63 (154)
T ss_dssp S
T ss_pred C
Confidence 5
No 56
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=24.09 E-value=96 Score=21.84 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=32.0
Q ss_pred ccceeeeecCch----hhhhhhh-cCce-eeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeec
Q 024730 96 GLKAALITTNSR----LKSFGDK-LGFA-TLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG 169 (263)
Q Consensus 96 GmKAA~VTn~~l----ikgfg~~-lGf~-V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIk 169 (263)
.+|-.+|.+.+. ++.+-+. .|+. |..... ..++++++ ...++|+||+-+.
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~----------------~~~a~~~l--------~~~~~dlii~d~~ 63 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYN----------------PFDAGDLL--------HTVKPDVVMLDLM 63 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECS----------------HHHHHHHH--------HHTCCSEEEEETT
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCccEEEEECC----------------HHHHHHHH--------HhcCCCEEEEecc
Confidence 566777777663 3344444 7887 533221 34566666 3356999999988
Q ss_pred cCC
Q 024730 170 AGE 172 (263)
Q Consensus 170 a~d 172 (263)
..+
T Consensus 64 l~~ 66 (143)
T 3cnb_A 64 MVG 66 (143)
T ss_dssp CTT
T ss_pred cCC
Confidence 764
No 57
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=23.59 E-value=61 Score=26.72 Aligned_cols=47 Identities=11% Similarity=0.189 Sum_probs=28.8
Q ss_pred CchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEe
Q 024730 105 NSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH 167 (263)
Q Consensus 105 ~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlH 167 (263)
.+.|....+.+|++|.... .+. . +.+...+.+-+++ +...+|+|+.=
T Consensus 42 ~~~L~~~l~~~G~~v~~~~-iv~---D----d~~~I~~al~~a~--------~~~~~DlVitt 88 (178)
T 2pjk_A 42 GDIIKQLLIENGHKIIGYS-LVP---D----DKIKILKAFTDAL--------SIDEVDVIIST 88 (178)
T ss_dssp HHHHHHHHHHTTCEEEEEE-EEC---S----CHHHHHHHHHHHH--------TCTTCCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEE-EeC---C----CHHHHHHHHHHHH--------hcCCCCEEEEC
Confidence 3567788888999986532 222 2 4555555555667 11238999864
No 58
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=23.03 E-value=77 Score=25.14 Aligned_cols=57 Identities=19% Similarity=0.338 Sum_probs=33.8
Q ss_pred cccceeeeecCch--hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccC
Q 024730 95 MGLKAALITTNSR--LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRG 153 (263)
Q Consensus 95 mGmKAA~VTn~~l--ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg 153 (263)
.|+|-+++||.+. +..+-+.+|+. .++...+..+....-+.-....++++.||+...
T Consensus 125 ~g~~~~i~t~~~~~~~~~~l~~~~l~--~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~ 183 (240)
T 2hi0_A 125 KGVKLAVVSNKPNEAVQVLVEELFPG--SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRD 183 (240)
T ss_dssp TTCEEEEEEEEEHHHHHHHHHHHSTT--TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGG
T ss_pred CCCEEEEEeCCCHHHHHHHHHHcCCc--ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 3789999999764 56666677754 222232222221122444567788999986543
No 59
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=22.48 E-value=1.6e+02 Score=20.34 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=31.7
Q ss_pred cceeeeecCc----hhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccC-cccEEEEeeccC
Q 024730 97 LKAALITTNS----RLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVS-QFDLVLVHIGAG 171 (263)
Q Consensus 97 mKAA~VTn~~----likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s-~fDlVFlHIka~ 171 (263)
+|-.+|.+++ .++..-+..|+.|..+.. ..++++++ ... ++|+||+-+...
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~----------------~~~a~~~l--------~~~~~~dlvi~d~~l~ 61 (132)
T 2rdm_A 6 VTILLADDEAILLLDFESTLTDAGFLVTAVSS----------------GAKAIEML--------KSGAAIDGVVTDIRFC 61 (132)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCEEEEESS----------------HHHHHHHH--------HTTCCCCEEEEESCCS
T ss_pred ceEEEEcCcHHHHHHHHHHHHHcCCEEEEECC----------------HHHHHHHH--------HcCCCCCEEEEeeeCC
Confidence 4566676665 344444567888753221 34566666 223 799999988765
Q ss_pred C
Q 024730 172 E 172 (263)
Q Consensus 172 d 172 (263)
+
T Consensus 62 ~ 62 (132)
T 2rdm_A 62 Q 62 (132)
T ss_dssp S
T ss_pred C
Confidence 3
No 60
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=22.40 E-value=59 Score=26.46 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=27.8
Q ss_pred cCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEe
Q 024730 104 TNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH 167 (263)
Q Consensus 104 n~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlH 167 (263)
|.+.|....+.+|++|.... .+. +.+...+.+.+++ + .++|+|+.=
T Consensus 28 n~~~l~~~l~~~G~~v~~~~-iv~--------Dd~~i~~al~~a~--------~-~~~DlVitt 73 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPE-VVA--------DGSPVGEALRKAI--------D-DDVDVILTS 73 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCE-EEC--------SSHHHHHHHHHHH--------H-TTCSEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEE-EeC--------CHHHHHHHHHHHH--------h-CCCCEEEEC
Confidence 44677888888999985532 222 3344444444555 1 368999864
No 61
>2qai_A V-type ATP synthase subunit F; VATF_pyrfu, ATPF, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Pyrococcus furiosus}
Probab=22.37 E-value=70 Score=25.11 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=38.6
Q ss_pred cceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccCC
Q 024730 97 LKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGE 172 (263)
Q Consensus 97 mKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~d 172 (263)
||-|+|.+...+.|| +.+|+..+.+. ...+| ....+.++++-| .+.++|-.|+++=...+
T Consensus 1 MKIaVIGD~Dtv~GF-rLaGi~~~~v~---~~~~t-----~~ee~~~~~~~l-------~~~~digIIlIte~ia~ 60 (111)
T 2qai_A 1 MKIVVMGDSDTVVGF-RLAGVHEAYEY---DESLE-----SVERARNKLREL-------LERDDVGIILITERLAQ 60 (111)
T ss_dssp CEEEEEECHHHHHHH-HHHTCSEEEEC---CSSHH-----HHHHHHHHHHHH-------HTCTTEEEEEEEHHHHH
T ss_pred CEEEEEECHHHHHHH-HHcCCceEEEe---cCCCC-----CHHHHHHHHHHH-------hhCCCeEEEEEcHHHHh
Confidence 789999999999888 67888876331 11111 123455666555 24468999999854433
No 62
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=22.26 E-value=94 Score=24.38 Aligned_cols=54 Identities=17% Similarity=0.236 Sum_probs=30.6
Q ss_pred cccceeeeecCchh----hhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSRL----KSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~li----kgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|-+|-.+|.+++.+ +.+-...|+.|..... ..++++++ ...++|+||+-+..
T Consensus 3 M~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~----------------~~~al~~~--------~~~~~dlvllD~~l 58 (230)
T 2oqr_A 3 MATSVLIVEDEESLADPLAFLLRKEGFEATVVTD----------------GPAALAEF--------DRAGADIVLLDLML 58 (230)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHHTTCEEEEECS----------------HHHHHHHH--------HHHCCSEEEEESSC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHCCCEEEEECC----------------HHHHHHHH--------hccCCCEEEEECCC
Confidence 45677777777643 3334456777743211 23455555 22457888888776
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 59 ~~ 60 (230)
T 2oqr_A 59 PG 60 (230)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 63
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=21.69 E-value=1.7e+02 Score=21.19 Aligned_cols=53 Identities=19% Similarity=0.316 Sum_probs=33.5
Q ss_pred ccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccC
Q 024730 96 GLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAG 171 (263)
Q Consensus 96 GmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~ 171 (263)
++|-.+|.+.+. ++.+-+..|+.|..... ..++++++ ...++|+||+-+...
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~----------------~~~a~~~l--------~~~~~dlvi~d~~l~ 62 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLGCNIITFTS----------------PLDALEAL--------KGTSVQLVISDMRMP 62 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESC----------------HHHHHHHH--------TTSCCSEEEEESSCS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcCCeEEEeCC----------------HHHHHHHH--------hcCCCCEEEEecCCC
Confidence 566777777764 33344456887743221 35677777 335699999998876
Q ss_pred C
Q 024730 172 E 172 (263)
Q Consensus 172 d 172 (263)
+
T Consensus 63 ~ 63 (154)
T 2rjn_A 63 E 63 (154)
T ss_dssp S
T ss_pred C
Confidence 4
No 64
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=21.11 E-value=1.1e+02 Score=23.70 Aligned_cols=55 Identities=15% Similarity=0.250 Sum_probs=34.9
Q ss_pred ccccceeeeecCch----hhhhhhhcCceee-ccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEee
Q 024730 94 FMGLKAALITTNSR----LKSFGDKLGFATL-QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHI 168 (263)
Q Consensus 94 FmGmKAA~VTn~~l----ikgfg~~lGf~V~-~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHI 168 (263)
-|.+|-.+|-+.+. ++.+-...|+.|+ ... + ..++++++ ...++|+||+-+
T Consensus 11 ~m~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~-------~---------~~~al~~~--------~~~~~dlvi~D~ 66 (205)
T 1s8n_A 11 AVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAG-------D---------GQEAVELA--------ELHKPDLVIMDV 66 (205)
T ss_dssp CCCCEEEEECSSHHHHHHHHHHHHHTTCEEEEEES-------S---------HHHHHHHH--------HHHCCSEEEEES
T ss_pred CCCccEEEEECCHHHHHHHHHHHHHCCCEEEEEeC-------C---------HHHHHHHH--------hhcCCCEEEEeC
Confidence 45678888888774 3344445688774 221 1 24455655 235689999999
Q ss_pred ccCC
Q 024730 169 GAGE 172 (263)
Q Consensus 169 ka~d 172 (263)
...+
T Consensus 67 ~~p~ 70 (205)
T 1s8n_A 67 KMPR 70 (205)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 8875
No 65
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=21.06 E-value=65 Score=23.10 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=33.5
Q ss_pred hccccceeeeecCchhh----hhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEee
Q 024730 93 RFMGLKAALITTNSRLK----SFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHI 168 (263)
Q Consensus 93 RFmGmKAA~VTn~~lik----gfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHI 168 (263)
++|.++-.+|-+.+... .+-...|+.|... .+ ..++++++ ...++|+||+-+
T Consensus 7 ~~~~~~iLivdd~~~~~~~l~~~L~~~~~~v~~~-------~~---------~~~al~~l--------~~~~~dlvllD~ 62 (140)
T 3c97_A 7 QIMPLSVLIAEDNDICRLVAAKALEKCTNDITVV-------TN---------GLQALQAY--------QNRQFDVIIMDI 62 (140)
T ss_dssp ---CCEEEEECCCHHHHHHHHHHHTTTCSEEEEE-------SS---------HHHHHHHH--------HHSCCSEEEECT
T ss_pred ccCCceEEEEcCCHHHHHHHHHHHHHcCCceEEE-------CC---------HHHHHHHH--------hcCCCCEEEEeC
Confidence 35677888888776543 3334456666432 11 35666666 335799999988
Q ss_pred ccCC
Q 024730 169 GAGE 172 (263)
Q Consensus 169 ka~d 172 (263)
...+
T Consensus 63 ~lp~ 66 (140)
T 3c97_A 63 QMPV 66 (140)
T ss_dssp TCCS
T ss_pred CCCC
Confidence 8764
No 66
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=20.95 E-value=1e+02 Score=21.80 Aligned_cols=54 Identities=13% Similarity=0.173 Sum_probs=33.1
Q ss_pred cccceeeeecCch----hhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSR----LKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~l----ikgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
+.||-.+|.+.+. ++.+-+..|+.|..+.. ..++++++ ...+||+||+-+..
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~----------------~~~a~~~l--------~~~~~dlvi~d~~l 61 (137)
T 3hdg_A 6 VALKILIVEDDTDAREWLSTIISNHFPEVWSAGD----------------GEEGERLF--------GLHAPDVIITDIRM 61 (137)
T ss_dssp -CCCEEEECSCHHHHHHHHHHHHTTCSCEEEESS----------------HHHHHHHH--------HHHCCSEEEECSSC
T ss_pred cccEEEEEeCCHHHHHHHHHHHHhcCcEEEEECC----------------HHHHHHHH--------hccCCCEEEEeCCC
Confidence 4678888887764 33334445666633221 34566666 33579999998876
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 62 ~~ 63 (137)
T 3hdg_A 62 PK 63 (137)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 67
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=20.92 E-value=89 Score=29.06 Aligned_cols=107 Identities=13% Similarity=0.144 Sum_probs=60.2
Q ss_pred chhhHHHHHHHHHhhhh--cccccCCCCccccccccCCCCCCchhhhccccceeeeecCchhhhhh---hhcCceeeccC
Q 024730 49 SEEERIVREFAVLIDAN--QDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFG---DKLGFATLQLN 123 (263)
Q Consensus 49 ~~~~r~v~E~a~LlD~~--d~~~~~~~~~~~~~~~~~~~~ipt~sERFmGmKAA~VTn~~likgfg---~~lGf~V~~~~ 123 (263)
++-.+-++++|++++.- +.+ -. +..+.. ..+-...+++-|-|.|+........+++ ..+||.|..+-
T Consensus 271 ~~T~~~l~~la~~~g~~~~~~i----~~-e~~~~~---~~~~d~~~~l~gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~ 342 (458)
T 1mio_B 271 SATDEFIMALSEATGKEVPASI----EE-ERGQLI---DLMIDAQQYLQGKKVALLGDPDEIIALSKFIIELGAIPKYVV 342 (458)
T ss_dssp HHHHHHHHHHHHHHCCCCCHHH----HH-HHHHHH---HHHHHTHHHHTTCEEEEEECHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCchHHH----HH-HHHHHH---HHHHHHHHHcCCCEEEEEcCchHHHHHHHHHHHCCCEEEEEE
Confidence 57778889999888742 000 00 000000 0122345678899999999887776665 57899986532
Q ss_pred cccccCCCCCCCChhHHHHHHHHHhccccCccc------------ccCcccEEEEeec
Q 024730 124 ELIETSDSLSGSPIDVVASELLKLLGLQRGKME------------EVSQFDLVLVHIG 169 (263)
Q Consensus 124 gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~------------~~s~fDlVFlHIk 169 (263)
++..+ ..+....+++++.+|-.+.++. ...+.||||=|.+
T Consensus 343 --~~~~~----~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~~~i~~~~pDl~ig~~~ 394 (458)
T 1mio_B 343 --TGTPG----MKFQKEIDAMLAEAGIEGSKVKVEGDFFDVHQWIKNEGVDLLISNTY 394 (458)
T ss_dssp --ESSCC----HHHHHHHHHHHHTTTCCSCEEEESCBHHHHHHHHHHSCCSEEEESGG
T ss_pred --eCCCC----HHHHHHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCCCEEEeCcc
Confidence 11211 2455556666666640111222 2346799887765
No 68
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=20.55 E-value=98 Score=27.66 Aligned_cols=25 Identities=12% Similarity=-0.024 Sum_probs=22.0
Q ss_pred eeeeecC-chhhhhhhhcCceeeccC
Q 024730 99 AALITTN-SRLKSFGDKLGFATLQLN 123 (263)
Q Consensus 99 AA~VTn~-~likgfg~~lGf~V~~~~ 123 (263)
.++|+|+ +.++.+|+..|..++.++
T Consensus 120 ~~Visn~p~~~~~~A~~~gIp~~~~~ 145 (288)
T 3obi_A 120 TAIVSNHPRETFSGFDFGDIPFYHFP 145 (288)
T ss_dssp EEEEESSCGGGSCCTTTTTCCEEECC
T ss_pred EEEEcCCChhHHHHHHHcCCCEEEeC
Confidence 6788999 889999999999998764
No 69
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=20.44 E-value=89 Score=26.73 Aligned_cols=26 Identities=15% Similarity=0.234 Sum_probs=20.1
Q ss_pred eeeeecCchhhh--hhhhcCceeeccCc
Q 024730 99 AALITTNSRLKS--FGDKLGFATLQLNE 124 (263)
Q Consensus 99 AA~VTn~~likg--fg~~lGf~V~~~~g 124 (263)
.++|||.+...+ .|++.|..|+.++-
T Consensus 38 ~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 38 VAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp EEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred EEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 567888776655 79999999987753
No 70
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori}
Probab=20.41 E-value=97 Score=28.02 Aligned_cols=56 Identities=9% Similarity=0.292 Sum_probs=44.1
Q ss_pred ccccceeeeecCchhhhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeeccC
Q 024730 94 FMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAG 171 (263)
Q Consensus 94 FmGmKAA~VTn~~likgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka~ 171 (263)
+.|+|.. .+.-.-+.+.+|+++++.+++ .. ....+++++++.+ ++.|-|+||+..+
T Consensus 181 ~iGiR~~----~~~e~~~~~~~gi~~~~~~ei-~~-------g~~~v~~~~~~~l----------~~~~~vylS~DiD 236 (330)
T 4g3h_A 181 YFGVRST----EQSERDVIRELQIPLFSVDAI-RE-------NMQEVVQKTKESL----------KAVDIIYLSLDLD 236 (330)
T ss_dssp EESCCBC----CHHHHHHHHHHTCCEECHHHH-HH-------CHHHHHHHHHHHH----------TTCSEEEEEEEGG
T ss_pred EEecCCC----CHHHHHHHHHcCCeEEEHHHh-hc-------CHHHHHHHHHHHh----------cCCCeEEEEEecC
Confidence 4588873 456678889999999999998 43 5677889999988 4568899998754
No 71
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=20.29 E-value=1.1e+02 Score=24.38 Aligned_cols=54 Identities=19% Similarity=0.209 Sum_probs=30.4
Q ss_pred cccceeeeecCchh----hhhhhhcCceeeccCcccccCCCCCCCChhHHHHHHHHHhccccCcccccCcccEEEEeecc
Q 024730 95 MGLKAALITTNSRL----KSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA 170 (263)
Q Consensus 95 mGmKAA~VTn~~li----kgfg~~lGf~V~~~~gl~g~~ds~~~~~~~~~a~~alkLLGf~eg~~~~~s~fDlVFlHIka 170 (263)
|.+|-.+|.+.+.+ +.+-...|+.|...... .++++++ ...++|+|++-+..
T Consensus 4 m~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~----------------~~al~~l--------~~~~~dlvilD~~l 59 (238)
T 2gwr_A 4 MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDG----------------TQALTAV--------RELRPDLVLLDLML 59 (238)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTCEEEEECCG----------------GGHHHHH--------HHHCCSEEEEESSC
T ss_pred ccCeEEEEeCCHHHHHHHHHHHHHCCCEEEEECCH----------------HHHHHHH--------HhCCCCEEEEeCCC
Confidence 45677777777643 33344568877543211 2234444 22457888888776
Q ss_pred CC
Q 024730 171 GE 172 (263)
Q Consensus 171 ~d 172 (263)
.+
T Consensus 60 ~~ 61 (238)
T 2gwr_A 60 PG 61 (238)
T ss_dssp SS
T ss_pred CC
Confidence 54
Done!