Query 024733
Match_columns 263
No_of_seqs 143 out of 1493
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 06:58:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024733.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024733hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1441 Glucose-6-phosphate/ph 100.0 3E-35 6.5E-40 249.7 18.1 257 3-262 12-269 (316)
2 PTZ00343 triose or hexose phos 100.0 1.1E-32 2.4E-37 241.8 26.4 256 4-262 45-310 (350)
3 TIGR00817 tpt Tpt phosphate/ph 100.0 1.3E-31 2.9E-36 231.2 25.0 249 8-262 2-255 (302)
4 KOG1444 Nucleotide-sugar trans 100.0 1.9E-27 4.1E-32 198.1 22.3 251 7-262 11-262 (314)
5 KOG1443 Predicted integral mem 100.0 6.2E-27 1.3E-31 192.7 19.3 256 5-262 13-277 (349)
6 PF08449 UAA: UAA transporter 99.9 8E-23 1.7E-27 176.5 23.5 235 21-262 13-259 (303)
7 KOG1442 GDP-fucose transporter 99.9 5.6E-22 1.2E-26 161.1 8.6 247 12-262 32-289 (347)
8 COG5070 VRG4 Nucleotide-sugar 99.9 3.9E-21 8.4E-26 151.9 11.5 241 12-262 10-258 (309)
9 PLN00411 nodulin MtN21 family 99.9 4.1E-19 8.8E-24 155.8 23.9 234 16-259 21-287 (358)
10 TIGR00950 2A78 Carboxylate/Ami 99.8 9E-19 2E-23 147.9 22.1 220 22-260 3-224 (260)
11 PF06027 DUF914: Eukaryotic pr 99.8 4.4E-18 9.5E-23 146.7 26.0 230 20-259 25-264 (334)
12 PRK11272 putative DMT superfam 99.8 3E-18 6.6E-23 147.2 24.7 240 1-259 1-244 (292)
13 PRK11689 aromatic amino acid e 99.8 2.1E-18 4.5E-23 148.5 22.0 225 11-259 7-246 (295)
14 PRK15430 putative chlorampheni 99.8 7.7E-18 1.7E-22 145.0 24.3 241 1-258 1-243 (296)
15 PRK11453 O-acetylserine/cystei 99.8 1.7E-17 3.6E-22 143.1 23.7 227 17-258 13-245 (299)
16 TIGR00688 rarD rarD protein. T 99.8 6.9E-17 1.5E-21 136.2 23.6 159 12-178 6-169 (256)
17 KOG1581 UDP-galactose transpor 99.8 1E-16 2.2E-21 132.6 18.6 220 35-262 47-275 (327)
18 PRK10532 threonine and homoser 99.7 1.4E-15 3E-20 130.8 25.3 228 6-260 10-241 (293)
19 KOG1580 UDP-galactose transpor 99.7 1.4E-17 3E-22 133.0 11.3 219 36-262 50-275 (337)
20 TIGR03340 phn_DUF6 phosphonate 99.7 1.2E-14 2.6E-19 124.3 24.3 228 18-260 11-243 (281)
21 KOG1582 UDP-galactose transpor 99.7 1.2E-16 2.5E-21 130.2 10.3 252 2-261 36-293 (367)
22 KOG2765 Predicted membrane pro 99.6 3.5E-14 7.6E-19 120.7 17.6 182 77-260 157-350 (416)
23 PF04142 Nuc_sug_transp: Nucle 99.6 3.8E-14 8.1E-19 118.2 17.4 168 71-241 14-198 (244)
24 COG0697 RhaT Permeases of the 99.5 2E-11 4.3E-16 104.1 27.8 180 8-196 7-191 (292)
25 KOG1583 UDP-N-acetylglucosamin 99.4 1.5E-12 3.2E-17 106.7 11.8 226 24-261 19-275 (330)
26 KOG3912 Predicted integral mem 99.4 8.5E-12 1.8E-16 102.5 14.7 242 16-260 11-294 (372)
27 PF00892 EamA: EamA-like trans 99.4 1.1E-12 2.5E-17 97.8 8.3 121 20-145 3-124 (126)
28 KOG2234 Predicted UDP-galactos 99.4 5.1E-10 1.1E-14 95.5 23.5 219 18-241 25-267 (345)
29 PF03151 TPT: Triose-phosphate 99.3 8.4E-12 1.8E-16 96.9 9.3 107 156-262 1-115 (153)
30 TIGR00776 RhaT RhaT L-rhamnose 99.3 7.4E-10 1.6E-14 95.1 20.9 167 15-196 8-187 (290)
31 COG2510 Predicted membrane pro 99.3 4.2E-11 9.1E-16 87.2 10.6 133 11-146 6-138 (140)
32 KOG2766 Predicted membrane pro 99.3 1.4E-11 3E-16 100.0 7.2 224 17-258 27-259 (336)
33 COG2962 RarD Predicted permeas 99.2 1.4E-08 3E-13 84.6 21.6 191 1-206 1-193 (293)
34 PF13536 EmrE: Multidrug resis 99.2 8.2E-11 1.8E-15 86.7 7.4 107 44-151 2-110 (113)
35 KOG4510 Permease of the drug/m 99.1 6.8E-12 1.5E-16 102.4 0.2 192 2-206 33-238 (346)
36 COG5006 rhtA Threonine/homoser 99.1 1.3E-08 2.8E-13 82.9 18.7 165 26-208 30-197 (292)
37 TIGR00950 2A78 Carboxylate/Ami 99.0 1.4E-08 3E-13 85.6 15.9 134 6-143 126-260 (260)
38 KOG4314 Predicted carbohydrate 98.7 2.3E-08 5.1E-13 78.5 5.8 106 73-178 51-158 (290)
39 PLN00411 nodulin MtN21 family 98.7 8.1E-07 1.8E-11 78.4 15.2 134 12-147 193-328 (358)
40 PRK11272 putative DMT superfam 98.6 1.7E-06 3.8E-11 74.3 14.0 132 11-147 153-285 (292)
41 PRK15051 4-amino-4-deoxy-L-ara 98.5 1.4E-06 2.9E-11 63.8 10.0 64 83-146 45-108 (111)
42 PRK10532 threonine and homoser 98.5 5.2E-06 1.1E-10 71.4 14.9 130 10-146 150-280 (293)
43 PF03151 TPT: Triose-phosphate 98.5 1.4E-05 3E-10 61.7 15.4 132 14-146 6-152 (153)
44 PRK11453 O-acetylserine/cystei 98.4 1.2E-05 2.7E-10 69.3 15.6 139 8-147 143-287 (299)
45 TIGR00817 tpt Tpt phosphate/ph 98.4 2.4E-06 5.1E-11 73.8 11.0 137 9-146 146-292 (302)
46 TIGR03340 phn_DUF6 phosphonate 98.4 1.9E-06 4.2E-11 73.6 10.0 70 75-144 211-280 (281)
47 PRK11689 aromatic amino acid e 98.4 8.6E-06 1.9E-10 70.2 13.4 128 11-146 159-286 (295)
48 TIGR00803 nst UDP-galactose tr 98.2 2.9E-06 6.3E-11 70.0 6.0 156 99-260 2-184 (222)
49 PTZ00343 triose or hexose phos 98.2 7.6E-05 1.6E-09 65.9 15.0 138 7-146 193-347 (350)
50 PRK15430 putative chlorampheni 98.1 9.1E-05 2E-09 63.8 13.5 69 78-146 216-284 (296)
51 TIGR00776 RhaT RhaT L-rhamnose 98.0 0.0002 4.3E-09 61.6 12.7 129 7-146 151-287 (290)
52 COG0697 RhaT Permeases of the 97.9 0.00078 1.7E-08 57.1 15.0 132 8-147 154-287 (292)
53 PRK02971 4-amino-4-deoxy-L-ara 97.8 7.8E-05 1.7E-09 56.0 7.1 72 78-149 51-124 (129)
54 COG5006 rhtA Threonine/homoser 97.8 0.00053 1.2E-08 56.4 11.7 127 11-143 151-278 (292)
55 PRK10452 multidrug efflux syst 97.6 0.00065 1.4E-08 50.2 8.9 70 78-147 33-103 (120)
56 PF06027 DUF914: Eukaryotic pr 97.6 0.002 4.4E-08 56.2 13.2 142 5-149 165-307 (334)
57 PF05653 Mg_trans_NIPA: Magnes 97.5 0.0046 1E-07 53.3 14.5 64 83-146 58-121 (300)
58 PF06800 Sugar_transport: Suga 97.5 0.021 4.4E-07 48.2 17.2 128 73-206 43-183 (269)
59 PRK09541 emrE multidrug efflux 97.4 0.0015 3.2E-08 47.6 8.8 69 79-147 34-103 (110)
60 PF08449 UAA: UAA transporter 97.4 0.0042 9E-08 53.7 13.1 138 9-147 155-297 (303)
61 COG2076 EmrE Membrane transpor 97.4 0.0014 3E-08 47.0 8.1 70 78-147 33-103 (106)
62 PRK11431 multidrug efflux syst 97.4 0.0025 5.4E-08 46.0 9.3 69 78-146 32-101 (105)
63 PRK10650 multidrug efflux syst 97.3 0.0047 1E-07 44.8 10.1 68 78-145 38-106 (109)
64 PF00893 Multi_Drug_Res: Small 97.0 0.0083 1.8E-07 42.3 8.5 58 81-138 35-93 (93)
65 COG2962 RarD Predicted permeas 96.9 0.035 7.6E-07 46.9 13.1 111 36-147 172-283 (293)
66 TIGR00803 nst UDP-galactose tr 96.8 0.026 5.7E-07 46.3 11.8 65 80-144 157-221 (222)
67 PF04657 DUF606: Protein of un 96.8 0.078 1.7E-06 40.3 12.9 116 25-144 18-138 (138)
68 PRK13499 rhamnose-proton sympo 96.6 0.46 1E-05 41.7 20.3 162 6-171 5-190 (345)
69 PF10639 UPF0546: Uncharacteri 96.2 0.014 3E-07 42.6 5.6 70 75-145 42-112 (113)
70 COG2510 Predicted membrane pro 96.2 0.088 1.9E-06 39.0 9.6 87 157-252 5-91 (140)
71 PF06800 Sugar_transport: Suga 96.2 0.093 2E-06 44.3 11.2 127 7-143 137-267 (269)
72 KOG2922 Uncharacterized conser 96.1 0.042 9.1E-07 47.0 8.5 66 82-147 71-136 (335)
73 KOG1441 Glucose-6-phosphate/ph 95.9 0.018 4E-07 49.8 5.7 141 5-146 160-306 (316)
74 COG3238 Uncharacterized protei 95.3 0.77 1.7E-05 35.2 12.1 118 25-145 22-144 (150)
75 TIGR00688 rarD rarD protein. T 95.2 0.57 1.2E-05 39.2 12.5 49 74-122 207-255 (256)
76 PF00892 EamA: EamA-like trans 94.8 0.039 8.4E-07 40.3 3.9 84 165-259 1-85 (126)
77 PF04142 Nuc_sug_transp: Nucle 93.7 2.5 5.5E-05 35.3 12.9 129 6-137 112-243 (244)
78 KOG1581 UDP-galactose transpor 93.4 1.6 3.5E-05 37.4 11.0 139 5-144 169-310 (327)
79 KOG4510 Permease of the drug/m 92.7 0.095 2.1E-06 43.9 2.7 70 72-141 250-319 (346)
80 PRK13499 rhamnose-proton sympo 92.5 3.8 8.3E-05 36.1 12.5 68 79-147 264-341 (345)
81 KOG2765 Predicted membrane pro 92.4 1.2 2.6E-05 39.3 9.0 128 22-150 261-393 (416)
82 COG5070 VRG4 Nucleotide-sugar 91.5 3.8 8.3E-05 33.6 10.4 122 17-140 164-289 (309)
83 PF04657 DUF606: Protein of un 90.0 3.1 6.8E-05 31.5 8.4 91 157-258 3-94 (138)
84 KOG1444 Nucleotide-sugar trans 89.8 2.3 4.9E-05 36.7 8.2 135 10-146 159-299 (314)
85 KOG1580 UDP-galactose transpor 87.0 1.4 3.1E-05 36.3 5.0 71 74-144 240-310 (337)
86 KOG3912 Predicted integral mem 79.6 23 0.0005 30.3 9.3 132 12-145 181-332 (372)
87 COG4975 GlcU Putative glucose 79.3 2.2 4.9E-05 35.5 3.3 127 74-206 58-197 (288)
88 COG3238 Uncharacterized protei 77.7 8.8 0.00019 29.5 5.9 96 154-258 4-99 (150)
89 PRK02237 hypothetical protein; 73.1 32 0.00069 24.8 9.8 45 104-148 62-106 (109)
90 PF02694 UPF0060: Uncharacteri 69.3 6.3 0.00014 28.3 3.1 43 106-148 62-104 (107)
91 PF05297 Herpes_LMP1: Herpesvi 63.0 2.4 5.2E-05 35.9 0.0 76 120-198 69-147 (381)
92 COG1742 Uncharacterized conser 61.4 15 0.00032 26.2 3.7 41 109-149 66-106 (109)
93 COG4975 GlcU Putative glucose 58.4 5.4 0.00012 33.3 1.3 65 71-136 206-270 (288)
94 KOG4831 Unnamed protein [Funct 56.6 13 0.00027 26.7 2.7 70 75-145 53-123 (125)
95 PF06379 RhaT: L-rhamnose-prot 54.4 1.5E+02 0.0033 26.1 11.7 165 7-176 6-194 (344)
96 KOG1582 UDP-galactose transpor 43.3 2E+02 0.0043 24.7 8.1 53 99-151 284-336 (367)
97 PF00909 Ammonium_transp: Ammo 35.1 3.4E+02 0.0073 24.4 18.8 21 235-255 358-378 (399)
98 KOG2234 Predicted UDP-galactos 31.9 3.6E+02 0.0079 23.8 13.3 139 5-146 180-321 (345)
99 KOG2766 Predicted membrane pro 31.6 3.3E+02 0.0072 23.2 9.4 118 26-149 184-301 (336)
100 PF03729 DUF308: Short repeat 30.5 1.4E+02 0.0031 18.7 4.6 29 133-161 2-30 (72)
101 COG4657 RnfA Predicted NADH:ub 29.2 1.1E+02 0.0023 24.0 4.1 61 118-178 88-155 (193)
102 PF11139 DUF2910: Protein of u 27.1 3.4E+02 0.0073 21.9 10.3 58 3-60 25-86 (214)
103 PF09930 DUF2162: Predicted tr 26.8 3.7E+02 0.0079 22.2 12.6 77 68-144 95-174 (224)
104 PF09656 PGPGW: Putative trans 23.6 1.7E+02 0.0037 18.1 3.6 43 131-178 5-47 (53)
105 COG4420 Predicted membrane pro 23.5 2.5E+02 0.0055 22.5 5.4 42 6-51 57-98 (191)
106 PF05653 Mg_trans_NIPA: Magnes 23.4 1.6E+02 0.0034 25.5 4.7 63 86-148 224-293 (300)
107 COG4858 Uncharacterized membra 21.7 4.3E+02 0.0094 21.3 8.7 20 10-29 102-121 (226)
108 PF07168 Ureide_permease: Urei 20.8 4.8E+02 0.01 22.8 6.9 41 214-254 58-98 (336)
No 1
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=3e-35 Score=249.67 Aligned_cols=257 Identities=44% Similarity=0.654 Sum_probs=224.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHH
Q 024733 3 SSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALS 82 (263)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (263)
+++..+...++..|+.++++.++.||++++.++||+|.+++.+|+..+.+...+ .+..+..|.++.+++.+++..++.|
T Consensus 12 ~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v-~~~l~~~~~~~~~~~~~~~~llpl~ 90 (316)
T KOG1441|consen 12 LKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLV-IKVLKLVPPSKISSKLPLRTLLPLG 90 (316)
T ss_pred cchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCCCccccccchHHHHHHH
Confidence 344566677789999999999999999999777999999999988777666554 5556666666666778999999999
Q ss_pred HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHH
Q 024733 83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIA 162 (263)
Q Consensus 83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~ 162 (263)
++++++..+.|.|++++|++++|++|+++|+++.++++++.+|+++...+.+++.+..||.+.+..|.++|+.|+..+++
T Consensus 91 ~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~ 170 (316)
T KOG1441|consen 91 LVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMI 170 (316)
T ss_pred HHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH-HHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHH
Q 024733 163 ATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLL-PATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFV 241 (263)
Q Consensus 163 a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 241 (263)
+.+..++++++.|+++.+++++.|+.+++.|+++.+...++ |.....|++.. .......++...+..+. .+++++++
T Consensus 171 s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~sv~~f~~ 248 (316)
T KOG1441|consen 171 SNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLL-NSVLAFLL 248 (316)
T ss_pred HHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHH-HHHHHHHH
Confidence 99999999999999997778899999999999999999999 88777777665 21122234444444444 44999999
Q ss_pred HHHHHHHHhccCceeEEeecc
Q 024733 242 NLTNFLVTKHTSALTLQVCLT 262 (263)
Q Consensus 242 ~~~~~~~~~~~s~~t~sv~g~ 262 (263)
|.+.|.+++++||+|++|.|+
T Consensus 249 Nls~f~~ig~tSalT~~V~g~ 269 (316)
T KOG1441|consen 249 NLSAFLVIGRTSALTYSVAGH 269 (316)
T ss_pred HHHHHHHHcccCchhhhhhcc
Confidence 999999999999999999986
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.1e-32 Score=241.77 Aligned_cols=256 Identities=22% Similarity=0.299 Sum_probs=213.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccc-hhhHHHHHHHHH
Q 024733 4 SSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIR-SRLQFLKISALS 82 (263)
Q Consensus 4 ~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (263)
+.+++...+++.|+.+|+..++.||+++++ +|+|++++.+|++++++.+.+... .+.+++++.+ ++++++..++.|
T Consensus 45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~g 121 (350)
T PTZ00343 45 NFKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQG 121 (350)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999998 899999999999999876554432 2233333332 456788999999
Q ss_pred HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHH
Q 024733 83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIA 162 (263)
Q Consensus 83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~ 162 (263)
+++...+...+.|++++++++++++|++.|+++++++++++|||++++++.+++++++|+.+.+.+|.++++.|++++++
T Consensus 122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~ 201 (350)
T PTZ00343 122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAML 201 (350)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHH
Confidence 99987777788999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred HHHHHHHHHHHHHHhhccCC---CCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhh-----hcccc-chHHHHHHHH
Q 024733 163 ATAARALKSVLQGILLSSEG---EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITL-----ALARD-DVKIIWYLLF 233 (263)
Q Consensus 163 a~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~l~~ 233 (263)
|++++++|+++.|+..++++ ++.++.+...++.+.+.++++|..+..|+....... +...+ ....+..++.
T Consensus 202 s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 281 (350)
T PTZ00343 202 SNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFF 281 (350)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence 99999999999999884332 257888888888999999999998766654322111 11111 1234556778
Q ss_pred HHHHHHHHHHHHHHHHhccCceeEEeecc
Q 024733 234 NSALAYFVNLTNFLVTKHTSALTLQVCLT 262 (263)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~s~~t~sv~g~ 262 (263)
+++.++++|.++|.+++++||+|+++.++
T Consensus 282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~ 310 (350)
T PTZ00343 282 SGVWYYLYNEVAFYCLGKVNQVTHAVANT 310 (350)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 89999999999999999999999998764
No 3
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.3e-31 Score=231.19 Aligned_cols=249 Identities=26% Similarity=0.339 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHH
Q 024733 8 FTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCI 87 (263)
Q Consensus 8 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (263)
+..+.+..|+..|++.++.||+++++ +++|..+++.|+.++.+.+.+..+ .+.+++++. ++++++..++.|++++.
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~g~~~~~ 77 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKI-SSALLKLLLPVAIVHTI 77 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCC-CHHHHHHHHHHHHHHHH
Confidence 56778899999999999999999998 889999999999999777655421 222233333 45678899999999999
Q ss_pred HHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHHHHHHH
Q 024733 88 SVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAAR 167 (263)
Q Consensus 88 ~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 167 (263)
+..+.|.|++|++++++++++++.|+++++++++++|||++++++.+++++++|+.+...+|.+.+..|+++++++++++
T Consensus 78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 157 (302)
T TIGR00817 78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF 157 (302)
T ss_pred HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998877667777888999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchh--hhhc-cccc-hHHHHHHHHHH-HHHHHHH
Q 024733 168 ALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGI--TLAL-ARDD-VKIIWYLLFNS-ALAYFVN 242 (263)
Q Consensus 168 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~--~~~~-~~~~-~~~~~~l~~~~-~~~~~~~ 242 (263)
++|.++.||.. +++++|+.+.+.|++..+.+.++|.....|+.+... +.+. .... ...+......+ ....++|
T Consensus 158 a~~~v~~k~~~--~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T TIGR00817 158 VSRNIFSKKAM--TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQ 235 (302)
T ss_pred HHHHHHHHHhh--ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Confidence 99999999987 445789999999999999999999986666543211 1010 0011 12222233333 3556677
Q ss_pred HHHHHHHhccCceeEEeecc
Q 024733 243 LTNFLVTKHTSALTLQVCLT 262 (263)
Q Consensus 243 ~~~~~~~~~~s~~t~sv~g~ 262 (263)
...+.+++++||.++++.+.
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~ 255 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNC 255 (302)
T ss_pred HHHHHHHccCCchHHHHHhh
Confidence 78889999999999988764
No 4
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.9e-27 Score=198.10 Aligned_cols=251 Identities=21% Similarity=0.274 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHH
Q 024733 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFC 86 (263)
Q Consensus 7 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (263)
.+.+....+|.++|+.+++.||+++..++||..+++...|.+.+.+.+.+ .+..|..+.++++ ++..|+++|.++++.
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~-lk~~~lv~~~~l~-~~~~kk~~P~~~lf~ 88 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLV-LKRLGLVNFRPLD-LRTAKKWFPVSLLFV 88 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH-HHHhceeecCCcC-hHHHHHHccHHHHHH
Confidence 34466788999999999999999999977776667777999988777665 4545555555553 566788999999999
Q ss_pred HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHHHHHH
Q 024733 87 ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAA 166 (263)
Q Consensus 87 ~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~ 166 (263)
++...+..+++|+++++++++|..+|+.+++.|..++|.|++.+.+.++....+|.......|.+++..|+.|++.+.+.
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~ 168 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLT 168 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhcc-ccchHHHHHHHHHHHHHHHHHHHH
Q 024733 167 RALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALA-RDDVKIIWYLLFNSALAYFVNLTN 245 (263)
Q Consensus 167 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~ 245 (263)
.+.+.++.|+.. +..+.+.+++++|.+.++.+.+....++.+.++ ....+.. ..+...+..+.++|+.++..+++.
T Consensus 169 ~a~~~v~~kk~v--d~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s 245 (314)
T KOG1444|consen 169 TAAFVVYVKKSV--DSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS 245 (314)
T ss_pred HHHHHHHHHHhh--ccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 677889999999999999999888886655444 2212211 234577888999999999999999
Q ss_pred HHHHhccCceeEEeecc
Q 024733 246 FLVTKHTSALTLQVCLT 262 (263)
Q Consensus 246 ~~~~~~~s~~t~sv~g~ 262 (263)
+.|++.+|++|++++|.
T Consensus 246 ~~ct~~~SAtT~tivG~ 262 (314)
T KOG1444|consen 246 FLCTRVNSATTTTIVGA 262 (314)
T ss_pred HHHHhhccccceeehhh
Confidence 99999999999999984
No 5
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.95 E-value=6.2e-27 Score=192.67 Aligned_cols=256 Identities=20% Similarity=0.405 Sum_probs=223.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhc---CCcccchhhHHHHHHHH
Q 024733 5 SKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMV---PMQTIRSRLQFLKISAL 81 (263)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 81 (263)
++...+..+..||.+|+++.+++|+.-.+ |++|+.++.+|.++-.+......+..+++ .+...+++++.|...|.
T Consensus 13 ~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPt 90 (349)
T KOG1443|consen 13 NRVLTLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPT 90 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhh
Confidence 46777788899999999999999999887 88899999999988776655544443322 22356788999999999
Q ss_pred HHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHH
Q 024733 82 SFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCI 161 (263)
Q Consensus 82 ~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l 161 (263)
++..+.+..++|+|++|++.+++++.|+..++|+.+++..+.-||+++.-....+++.+|+.+.+.++.++|..|+.+++
T Consensus 91 alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~ 170 (349)
T KOG1443|consen 91 ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVL 170 (349)
T ss_pred hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCC-CCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhh-ccccc----hHHHHHHHHHH
Q 024733 162 AATAARALKSVLQGILLSSEG-EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLA-LARDD----VKIIWYLLFNS 235 (263)
Q Consensus 162 ~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~~~ 235 (263)
.+.++.+++..+.|.++++++ .+-+|+..+++..+...+.++|....+||.....+.. ....| ......+.++|
T Consensus 171 ~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g 250 (349)
T KOG1443|consen 171 AASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGG 250 (349)
T ss_pred HHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHH
Confidence 999999999999999997665 4569999999999999999999999999988764322 22222 24456678899
Q ss_pred HHHHHHHHHHHHHHhccCceeEEeecc
Q 024733 236 ALAYFVNLTNFLVTKHTSALTLQVCLT 262 (263)
Q Consensus 236 ~~~~~~~~~~~~~~~~~s~~t~sv~g~ 262 (263)
.++++.-++.|.++.++|.+|.++.|.
T Consensus 251 ~laF~l~~sEflLl~~Ts~ltlSIaGI 277 (349)
T KOG1443|consen 251 LLAFLLEFSEFLLLSRTSSLTLSIAGI 277 (349)
T ss_pred HHHHHHHHHHHheeeeccceeeeHHHH
Confidence 999999999999999999999999873
No 6
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.92 E-value=8e-23 Score=176.46 Aligned_cols=235 Identities=20% Similarity=0.359 Sum_probs=189.5
Q ss_pred HHHHHHHHHHhhh-CCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhcccc
Q 024733 21 IGVLLLNKYLLSN-YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFL 99 (263)
Q Consensus 21 ~~~~~~nK~~l~~-~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~ 99 (263)
....+.++.+.++ ++.++|..+++.|+.++.+...+.....+..+ +++.+++.+++.++++.++..+.|.|++|+
T Consensus 13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~al~~i 88 (303)
T PF08449_consen 13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK----SRKIPLKKYAILSFLFFLASVLSNAALKYI 88 (303)
T ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC----CCcChHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444556666654 33448999999999999877666444333111 245667888899999999999999999999
Q ss_pred chhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCc----c------hHHHHHHHHHHHHHHHH
Q 024733 100 PVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPS----F------HLFGFLMCIAATAARAL 169 (263)
Q Consensus 100 ~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~----~------~~~G~~~~l~a~~~~a~ 169 (263)
|.+..+++|++.|+++++++++++|||++++++.+++++++|+.+....|.+ . ...|+++.+++.++.|+
T Consensus 89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~ 168 (303)
T PF08449_consen 89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAF 168 (303)
T ss_pred ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998766521 1 12399999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhc-cccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 024733 170 KSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIME-KNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLV 248 (263)
Q Consensus 170 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 248 (263)
+.+++||.. ++++.++.+.++|.+.++.+..++.....+ ++..+. .+....++..+..+...+..++..+...+.+
T Consensus 169 ~~~~qe~~~--~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~-~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~ 245 (303)
T PF08449_consen 169 TGVYQEKLF--KKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA-IRFISAHPSVLLYLLLFSLTGALGQFFIFYL 245 (303)
T ss_pred HHHHHHHHH--HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 778899999999999999999988886532 232221 1122334567788888999999999999999
Q ss_pred HhccCceeEEeecc
Q 024733 249 TKHTSALTLQVCLT 262 (263)
Q Consensus 249 ~~~~s~~t~sv~g~ 262 (263)
++++||++.+++++
T Consensus 246 ~~~~~al~~t~v~t 259 (303)
T PF08449_consen 246 IKKFSALTTTIVTT 259 (303)
T ss_pred HHhcCchhhhhHHH
Confidence 99999999998765
No 7
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.86 E-value=5.6e-22 Score=161.12 Aligned_cols=247 Identities=19% Similarity=0.284 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh--CCCCchHHHHHHHHHHHHHHHHHHHHHHhhcC------CcccchhhHHHHHHHHHH
Q 024733 12 LVAAWYSSNIGVLLLNKYLLSN--YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVP------MQTIRSRLQFLKISALSF 83 (263)
Q Consensus 12 ~~~~~~~~s~~~~~~nK~~l~~--~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 83 (263)
....+-.+|+.+.+.||++++. ...+.|...+..|.+....++..+.+...+.| .-++ +-+..++..|.++
T Consensus 32 ~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~l-dl~t~r~vlplsv 110 (347)
T KOG1442|consen 32 AVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQL-DLATARQVLPLSV 110 (347)
T ss_pred hccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccc-cHHHHHhhcchhh
Confidence 3445667899999999999986 34678999999999999877666554433222 1122 3456788999999
Q ss_pred HHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC---CcchHHHHHHH
Q 024733 84 VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE---PSFHLFGFLMC 160 (263)
Q Consensus 84 ~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~ 160 (263)
.+..+....|..++|.+++++++-|++..+|+.++.++++|||-+..-..++.+++.|-.+.+-+| ...++.|.+++
T Consensus 111 Vfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifG 190 (347)
T KOG1442|consen 111 VFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFG 190 (347)
T ss_pred eeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHH
Confidence 999999999999999999999999999999999999999999999999999999999999987777 45779999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHH
Q 024733 161 IAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240 (263)
Q Consensus 161 l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 240 (263)
+.|.++-|+-.++.||.. ....-.-+.+++|.+..+.++.+|... ..|+....+...+.++..+|.++.++|+.+|.
T Consensus 191 VlaSl~vAlnaiytkk~l--~~v~~~iw~lt~ynnv~a~lLflpll~-lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~ 267 (347)
T KOG1442|consen 191 VLASLAVALNAIYTKKVL--PPVGDCIWRLTAYNNVNALLLFLPLLI-LNGEFQAVVGFPHLPAIKFWILMTLSGLFGFA 267 (347)
T ss_pred HHHHHHHHHHHHhhheec--ccccCeehhhHHHHHHHHHHHHHHHHH-HcchHHHHcCcccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999977 323334589999999999999999884 45655444333344567899999999999999
Q ss_pred HHHHHHHHHhccCceeEEeecc
Q 024733 241 VNLTNFLVTKHTSALTLQVCLT 262 (263)
Q Consensus 241 ~~~~~~~~~~~~s~~t~sv~g~ 262 (263)
+|+.+..-+|.+||+|+.+.|+
T Consensus 268 mgyvTg~QIK~TSplThnISgT 289 (347)
T KOG1442|consen 268 MGYVTGWQIKVTSPLTHNISGT 289 (347)
T ss_pred hhheeeEEEEecccceeeecHh
Confidence 9999999999999999999876
No 8
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.86 E-value=3.9e-21 Score=151.94 Aligned_cols=241 Identities=18% Similarity=0.242 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHh
Q 024733 12 LVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVF 91 (263)
Q Consensus 12 ~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (263)
....|..+|+.+++.||++++..||+....+.+.|.+.+.+.+.+ .+..|..+-| ..+.|.+.|.+++.......
T Consensus 10 ~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~i-Lk~l~~~~fR----~t~aK~WfpiSfLLv~MIyt 84 (309)
T COG5070 10 ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLI-LKFLRLVEFR----LTKAKKWFPISFLLVVMIYT 84 (309)
T ss_pred HHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHH-HHHHhHhhee----hhhhhhhcCHHHHHHHHHHh
Confidence 455899999999999999999999999999999999999877665 3443332221 34567788999999999999
Q ss_pred hhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--------cchHHHHHHHHHH
Q 024733 92 GNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP--------SFHLFGFLMCIAA 163 (263)
Q Consensus 92 ~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~a 163 (263)
...|++|++++.++++|.++.+.++..+..++|.|.+-.+..+.++.+........+|. ..| .|++|+...
T Consensus 85 ~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~N 163 (309)
T COG5070 85 SSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTN 163 (309)
T ss_pred cccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehh
Confidence 99999999999999999999999999999999999999999999999998888888885 245 499999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHH
Q 024733 164 TAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNL 243 (263)
Q Consensus 164 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 243 (263)
++..+.+....|+-. +-.+....+.++|.+..+.+.++..++..|.|....-. ..........+..+|+++++..+
T Consensus 164 clssaafVL~mrkri--~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~a--nnl~~d~l~am~ISgl~svgiSy 239 (309)
T COG5070 164 CLSSAAFVLIMRKRI--KLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLA--NNLSVDSLMAMFISGLCSVGISY 239 (309)
T ss_pred hHhHHHHHHHHHHhh--cccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhh--cCCChHHHHHHHHHHHHHhhhhh
Confidence 999999998888766 55566778999999999999999999888777653211 12233445667889999999999
Q ss_pred HHHHHHhccCceeEEeecc
Q 024733 244 TNFLVTKHTSALTLQVCLT 262 (263)
Q Consensus 244 ~~~~~~~~~s~~t~sv~g~ 262 (263)
+.-.|++-+|.+|++++|+
T Consensus 240 ~saWcvrVtSSTtySMvGA 258 (309)
T COG5070 240 CSAWCVRVTSSTTYSMVGA 258 (309)
T ss_pred ccceeEeehhhhHHHHHHH
Confidence 9999999999999999886
No 9
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.85 E-value=4.1e-19 Score=155.82 Aligned_cols=234 Identities=16% Similarity=0.193 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhh-cCCcccchhhHHHHHHHHHHHHHHHHHhhhh
Q 024733 16 WYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKM-VPMQTIRSRLQFLKISALSFVFCISVVFGNV 94 (263)
Q Consensus 16 ~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (263)
-=.+..++..+.|..+++ +.+ |..+.++|+.++++++.++.+++++ ++.++. .++++......+++......+.+.
T Consensus 21 ~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~-~~~~~~~l~l~g~~g~~~~~~~~~ 97 (358)
T PLN00411 21 TETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPL-SVSILSKIGLLGFLGSMYVITGYI 97 (358)
T ss_pred HHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 336677888899999965 677 9999999999998887776655432 222222 234556666667666556668999
Q ss_pred hccccchhHHHHHhhhHHHHHHHHHHHH------hhcccChhhHHHHhhhhhhheeeecc-CC-----------------
Q 024733 95 SLRFLPVSFNQAVGATTPFFTAVFAYLM------TLKREAWLTYVTLIPVVTGVIIASGG-EP----------------- 150 (263)
Q Consensus 95 sl~~~~~~~~~vi~~~~pi~~~i~~~~~------~~~~~~~~~~~~~~l~~~Gv~l~~~~-~~----------------- 150 (263)
+++|++++.+.++.++.|++++++++++ +|||+++++++|++++++|+.+.... +.
T Consensus 98 gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~ 177 (358)
T PLN00411 98 GIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLS 177 (358)
T ss_pred HHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccc
Confidence 9999999999999999999999999999 69999999999999999999876531 10
Q ss_pred ------cch-HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCH-HHHHHHHHHHHHHHHHHHHHHhccccchhhhhccc
Q 024733 151 ------SFH-LFGFLMCIAATAARALKSVLQGILLSSEGEKLNS-MNLLLYMAPIAVVLLLPATLIMEKNVVGITLALAR 222 (263)
Q Consensus 151 ------~~~-~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 222 (263)
..+ ..|..++++++++||.|++..|+.. .++++ ...+.++...+...+.+.+...|+.+...+ ...
T Consensus 178 ~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~----~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~ 251 (358)
T PLN00411 178 PPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIM----SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW--IIH 251 (358)
T ss_pred cccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH----HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccc--eec
Confidence 112 4599999999999999999999987 34433 466777777777777666655554322211 112
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEe
Q 024733 223 DDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQV 259 (263)
Q Consensus 223 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv 259 (263)
++...+. ++..++...+.....+.++++.+|...++
T Consensus 252 ~~~~~~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~ 287 (358)
T PLN00411 252 FDITLIT-IVTMAIITSVYYVIHSWTVRHKGPLYLAI 287 (358)
T ss_pred cchHHHH-HHHHHHHHHHHHHHHHHHHhccCchHHHH
Confidence 2222221 22233333333345578899999876553
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.84 E-value=9e-19 Score=147.86 Aligned_cols=220 Identities=15% Similarity=0.117 Sum_probs=159.0
Q ss_pred HHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccch
Q 024733 22 GVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPV 101 (263)
Q Consensus 22 ~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~ 101 (263)
......|+.+++ +.| |..+.+.|++.+.+.+.+..+. + + ++++..+.....++...++..+.+.|++++++
T Consensus 3 ~~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~-~--~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 3 TTGVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRR-R--P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred chHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHh-c--c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 344567998876 356 8888989988887766554332 2 1 23344444444455668888999999999999
Q ss_pred hHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC-CcchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 024733 102 SFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE-PSFHLFGFLMCIAATAARALKSVLQGILLSS 180 (263)
Q Consensus 102 ~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~ 180 (263)
+.++++.++.|+++++++.+++|||++++++.++.++++|+.+...++ .+.+..|+.++++++++++.+.++.|+..
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~-- 151 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLV-- 151 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHh--
Confidence 999999999999999999999999999999999999999998876443 44557899999999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHH-HHHHHHHHHHHhccCceeEEe
Q 024733 181 EGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALA-YFVNLTNFLVTKHTSALTLQV 259 (263)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~s~~t~sv 259 (263)
++.+.++.....+....+.+.++|.....+.+.. .+...+..+...+.++ .......+..+++.++.+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~ 223 (260)
T TIGR00950 152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ--------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASI 223 (260)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC--------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 4344445566667788888888888754332221 1222333333333333 333344577888888876654
Q ss_pred e
Q 024733 260 C 260 (263)
Q Consensus 260 ~ 260 (263)
.
T Consensus 224 ~ 224 (260)
T TIGR00950 224 L 224 (260)
T ss_pred H
Confidence 3
No 11
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.84 E-value=4.4e-18 Score=146.71 Aligned_cols=230 Identities=14% Similarity=0.202 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-cccchhhHHHHHHHHHHHHHHHHHhhhhhccc
Q 024733 20 NIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-QTIRSRLQFLKISALSFVFCISVVFGNVSLRF 98 (263)
Q Consensus 20 s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~ 98 (263)
..+....++.+-++ |++.|...++.-++.-.++-.....+++..++ .+. .+++|++.+..+++...+..+.+.|++|
T Consensus 25 ~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~-~~~~~w~y~lla~~Dv~aN~~~v~a~~y 102 (334)
T PF06027_consen 25 ITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKV-LKRPWWKYFLLALLDVEANYLVVLAYQY 102 (334)
T ss_pred HHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhh-cchhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33444556666655 78889988877776544332222222221111 111 2344555667799999999999999999
Q ss_pred cchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC---------cchHHHHHHHHHHHHHHHH
Q 024733 99 LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP---------SFHLFGFLMCIAATAARAL 169 (263)
Q Consensus 99 ~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~ 169 (263)
++++.+|++.++..+++++++++++|||+++.+++|++++++|+++....|. +...+|.++++.++++||.
T Consensus 103 TsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~ 182 (334)
T PF06027_consen 103 TSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAV 182 (334)
T ss_pred ccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988876552 2347899999999999999
Q ss_pred HHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 024733 170 KSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVT 249 (263)
Q Consensus 170 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 249 (263)
++++.|+.. ++.+..+.......++.+...+.....|...... .+++.....+++..++.-+......-..+
T Consensus 183 ~nV~~E~~v----~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~----~~w~~~~~~~~v~~~~~lf~~y~l~p~~l 254 (334)
T PF06027_consen 183 SNVLEEKLV----KKAPRVEFLGMLGLFGFIISGIQLAILERSGIES----IHWTSQVIGLLVGYALCLFLFYSLVPIVL 254 (334)
T ss_pred HHHHHHHhc----ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhc----cCCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 3567889999999999999988877777555432 23444444444444444344433445678
Q ss_pred hccCceeEEe
Q 024733 250 KHTSALTLQV 259 (263)
Q Consensus 250 ~~~s~~t~sv 259 (263)
+.+||+...+
T Consensus 255 ~~ssAt~~nL 264 (334)
T PF06027_consen 255 RMSSATFFNL 264 (334)
T ss_pred HhCccceeeh
Confidence 8899886654
No 12
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.83 E-value=3e-18 Score=147.24 Aligned_cols=240 Identities=18% Similarity=0.192 Sum_probs=166.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHH
Q 024733 1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISA 80 (263)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (263)
|+.+.-+..++....-.+.+.+.....|...++ .| |..++++|+.++.+.+.++.+.+++ +. +++++++....
T Consensus 1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~-~~---~~~~~~~~~~~ 73 (292)
T PRK11272 1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGH-PL---PTLRQWLNAAL 73 (292)
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCC-CC---CcHHHHHHHHH
Confidence 344444444555555666777778888999887 77 9999999999998877665554321 11 23445665666
Q ss_pred HHHHH-HHHHHhhhhhc-cccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeecc-CCcchHHHH
Q 024733 81 LSFVF-CISVVFGNVSL-RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG-EPSFHLFGF 157 (263)
Q Consensus 81 ~~~~~-~~~~~~~~~sl-~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~ 157 (263)
.|.+. .....+.+.+. ++.+++.++++.++.|+++++++++ +|||++++++.+++++++|+.+...+ +.+.+..|.
T Consensus 74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~ 152 (292)
T PRK11272 74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGA 152 (292)
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHH
Confidence 66554 56677778888 9999999999999999999999986 69999999999999999999887543 334556899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHH
Q 024733 158 LMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSAL 237 (263)
Q Consensus 158 ~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 237 (263)
.++++++++||.+.+..||.. + + ++...+.++...+...+.+.....+.+... ..+...+..+...++.
T Consensus 153 l~~l~a~~~~a~~~~~~~~~~--~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~l~i~ 221 (292)
T PRK11272 153 ILILIASASWAFGSVWSSRLP--L--P-VGMMAGAAEMLAAGVVLLIASLLSGERLTA------LPTLSGFLALGYLAVF 221 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhcC--C--C-cchHHHHHHHHHHHHHHHHHHHHcCCcccc------cCCHHHHHHHHHHHHH
Confidence 999999999999999999864 2 2 345566788888888888876443322110 1122223233333332
Q ss_pred H-HHHHHHHHHHHhccCceeEEe
Q 024733 238 A-YFVNLTNFLVTKHTSALTLQV 259 (263)
Q Consensus 238 ~-~~~~~~~~~~~~~~s~~t~sv 259 (263)
+ ..-....+..+++.++.+.++
T Consensus 222 ~s~~~~~l~~~~~~~~~~~~~s~ 244 (292)
T PRK11272 222 GSIIAISAYMYLLRNVRPALATS 244 (292)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHH
Confidence 2 222234456777777755443
No 13
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.83 E-value=2.1e-18 Score=148.47 Aligned_cols=225 Identities=15% Similarity=0.086 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHH
Q 024733 11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVV 90 (263)
Q Consensus 11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (263)
+....-.+.+.+.....|..+++ +| |..++++|+.++.+++..+. + +++. ++++++..+..++.+.....
T Consensus 7 l~~l~a~~~Wg~~~~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~---~-~~~~---~~~~~~~~~~~~l~~~~~~~ 76 (295)
T PRK11689 7 LIGLIAILLWSTMVGLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTV---G-FPRL---RQFPKRYLLAGGLLFVSYEI 76 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHc---c-cccc---ccccHHHHHHHhHHHHHHHH
Confidence 33334444555667788999988 77 99999999999987765432 1 1111 12233444455555566666
Q ss_pred hhhhhcc----ccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCc-----------chHH
Q 024733 91 FGNVSLR----FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPS-----------FHLF 155 (263)
Q Consensus 91 ~~~~sl~----~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~-----------~~~~ 155 (263)
+.+.+++ +.+++.+.++.++.|+++++++++++|||++++++++++++++|+.++..++.+ .+..
T Consensus 77 ~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK11689 77 CLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPL 156 (295)
T ss_pred HHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChH
Confidence 7666664 467788899999999999999999999999999999999999999888655421 2346
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHH
Q 024733 156 GFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS 235 (263)
Q Consensus 156 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 235 (263)
|..++++++++||.|+++.||.. ++.++..... ..+...+.+.... +++.. . +.+...+..+...+
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~----~~~~~~~~~~---~~~~~~l~~~~~~-~~~~~-~-----~~~~~~~~~l~~~~ 222 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYA----RGKNGITLFF---ILTALALWIKYFL-SPQPA-M-----VFSLPAIIKLLLAA 222 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc----CCCCchhHHH---HHHHHHHHHHHHH-hcCcc-c-----cCCHHHHHHHHHHH
Confidence 99999999999999999999976 3456654422 2333444443323 32221 0 12223333333444
Q ss_pred HHHHHHHHHHHHHHhccCceeEEe
Q 024733 236 ALAYFVNLTNFLVTKHTSALTLQV 259 (263)
Q Consensus 236 ~~~~~~~~~~~~~~~~~s~~t~sv 259 (263)
+.+.......+..+++.+|...++
T Consensus 223 ~~t~~~~~l~~~al~~~~a~~~s~ 246 (295)
T PRK11689 223 AAMGFGYAAWNVGILHGNMTLLAT 246 (295)
T ss_pred HHHHHHHHHHHHHHHccCHHHHHH
Confidence 445555556678889988876554
No 14
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.82 E-value=7.7e-18 Score=145.00 Aligned_cols=241 Identities=9% Similarity=0.047 Sum_probs=159.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-c-ccchhhHHHHH
Q 024733 1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-Q-TIRSRLQFLKI 78 (263)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 78 (263)
|...++.|.......-.+.+.......|.. ++ .| |..+.++|+.++.+.+..+...++..++ + +..+++++...
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~--~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY--VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFML 76 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC--CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHH
Confidence 455667777777776667777777777975 44 77 9999999999997765554433221111 0 00112222323
Q ss_pred HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHH
Q 024733 79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFL 158 (263)
Q Consensus 79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~ 158 (263)
...++..+.+..+.++|++++|++.++++.++.|+++++++++++|||++++++.+++++++|+.++..++.+.. .
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~ 152 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----I 152 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----H
Confidence 344566678899999999999999999999999999999999999999999999999999999988754332222 4
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHH
Q 024733 159 MCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALA 238 (263)
Q Consensus 159 ~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 238 (263)
++++++++||.|.++.||.. +++..+....+.++.+.+.....+.. +... .. ..+.+...+..+...++.+
T Consensus 153 ~~l~aa~~~a~~~i~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~---~~~~~~~~~~~~~~~g~~t 223 (296)
T PRK15430 153 IALGLAFSFAFYGLVRKKIA--VEAQTGMLIETMWLLPVAAIYLFAIA---DSST-SH---MGQNPMSLNLLLIAAGIVT 223 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHHHHc---cCCc-cc---ccCCcHHHHHHHHHHHHHH
Confidence 68889999999999999865 33334555666666666655543322 1111 00 0011111122233333334
Q ss_pred HHHHHHHHHHHhccCceeEE
Q 024733 239 YFVNLTNFLVTKHTSALTLQ 258 (263)
Q Consensus 239 ~~~~~~~~~~~~~~s~~t~s 258 (263)
..-..+.+...++.+|.+.+
T Consensus 224 ~i~~~~~~~a~~~~~a~~~s 243 (296)
T PRK15430 224 TVPLLCFTAAATRLRLSTLG 243 (296)
T ss_pred HHHHHHHHHHHhcCCHHHHH
Confidence 44445567788888776544
No 15
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.81 E-value=1.7e-17 Score=143.11 Aligned_cols=227 Identities=17% Similarity=0.215 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHH-HHHHHhhhhh
Q 024733 17 YSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVF-CISVVFGNVS 95 (263)
Q Consensus 17 ~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s 95 (263)
.+.+.+.....|..+++ .| |..++++|+.++.+.+..+.+ +++. +++.....++.. .....+.+.+
T Consensus 13 ~~~Wg~~~~~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~----~~~~------~~~~~~~~g~~~~~~~~~~~~~~ 79 (299)
T PRK11453 13 VVVWGLNFVVIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFVA----RPKV------PLNLLLGYGLTISFGQFAFLFCA 79 (299)
T ss_pred HHHHhhhHHHHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHhc----CCCC------chHHHHHHHHHHHHHHHHHHHHH
Confidence 44455666677999887 77 999999999987665443221 1111 123344445543 3444566778
Q ss_pred ccc-cchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC---CcchHHHHHHHHHHHHHHHHHH
Q 024733 96 LRF-LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE---PSFHLFGFLMCIAATAARALKS 171 (263)
Q Consensus 96 l~~-~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~ 171 (263)
+++ .+++.++++.++.|+++.+++++++|||++++++++++++++|+.++..++ .+.+..|..++++++++++.+.
T Consensus 80 ~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~ 159 (299)
T PRK11453 80 INFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGN 159 (299)
T ss_pred HHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 887 689999999999999999999999999999999999999999998876543 2334679999999999999999
Q ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHH-HHHHHHh
Q 024733 172 VLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNL-TNFLVTK 250 (263)
Q Consensus 172 v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~ 250 (263)
++.||..+ ++...+......++...+.+.........|++.... .+..+.+...+..++..++++....+ ..+..++
T Consensus 160 v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~ 237 (299)
T PRK11453 160 IFNKKIMS-HSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLG 237 (299)
T ss_pred HHHHHHhc-ccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999762 222233445556666666555555444444433110 11112333444444444433332222 2346667
Q ss_pred ccCceeEE
Q 024733 251 HTSALTLQ 258 (263)
Q Consensus 251 ~~s~~t~s 258 (263)
+.+|.+.+
T Consensus 238 ~~~a~~~s 245 (299)
T PRK11453 238 RYETWRVA 245 (299)
T ss_pred hCCHHHHH
Confidence 77765544
No 16
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.79 E-value=6.9e-17 Score=136.23 Aligned_cols=159 Identities=9% Similarity=-0.015 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC--cc---cchhhHHHHHHHHHHHHH
Q 024733 12 LVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM--QT---IRSRLQFLKISALSFVFC 86 (263)
Q Consensus 12 ~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~ 86 (263)
....-.+.+.......|. +++ .| |..+.++|++++.+.+.++...++++++ ++ .++++.+......+++..
T Consensus 6 ~~i~a~~~wg~~~~~~k~-~~~--~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 81 (256)
T TIGR00688 6 VSLLASFLFGYMYYYSKL-LKP--LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIG 81 (256)
T ss_pred HHHHHHHHHHHHHHHHHH-hcc--CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence 333444455566667798 455 77 9999999999998776554433221110 11 112222334555677778
Q ss_pred HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHHHHHHHHHH
Q 024733 87 ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAA 166 (263)
Q Consensus 87 ~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~ 166 (263)
.+..+.++|+++++++.++++.++.|+++++++++++|||+++++++++.++++|+.+...++.+.+ .++++++++
T Consensus 82 ~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~ 157 (256)
T TIGR00688 82 FNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFS 157 (256)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999987754332222 357889999
Q ss_pred HHHHHHHHHHhh
Q 024733 167 RALKSVLQGILL 178 (263)
Q Consensus 167 ~a~~~v~~k~~~ 178 (263)
++.|.+..||..
T Consensus 158 ~a~~~i~~~~~~ 169 (256)
T TIGR00688 158 FTAYGLIRKALK 169 (256)
T ss_pred HHHHHHHHhhcC
Confidence 999999999865
No 17
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1e-16 Score=132.62 Aligned_cols=220 Identities=17% Similarity=0.248 Sum_probs=183.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHH
Q 024733 35 GFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFF 114 (263)
Q Consensus 35 ~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~ 114 (263)
.|..|..+.++|-+.+.+.......+.++. .+.++.++++...++.+..+.++.+.|++|++-+...+.|++.-+.
T Consensus 47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~----~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIP 122 (327)
T KOG1581|consen 47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKE----LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIP 122 (327)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccccc----CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhH
Confidence 488899999999999988876655543332 2345667778788999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC---------cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 024733 115 TAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP---------SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKL 185 (263)
Q Consensus 115 ~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~ 185 (263)
+++++.++.|+|++..+++...++..|+.+....+. +.+++|+.++....+..++.+..++++. +..++
T Consensus 123 Vmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf--~~~k~ 200 (327)
T KOG1581|consen 123 VMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLF--KKYKV 200 (327)
T ss_pred HHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHh--ccCCc
Confidence 999999999999999999999999999988765431 2458999999999999999999999999 78899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeecc
Q 024733 186 NSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLT 262 (263)
Q Consensus 186 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~g~ 262 (263)
++++++++.+.++++...... +..+...+ ..+....++..+..+.+-+.++...+...|+.+++.+|+|.+.+.+
T Consensus 201 s~~~mM~~vNLf~~i~~~~~l-i~qg~~~~-av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~t 275 (327)
T KOG1581|consen 201 SSLHMMFGVNLFSAILNGTYL-ILQGHLLP-AVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMT 275 (327)
T ss_pred cHhHHHHHHHHHHHHHHHHhh-hcCCCCch-HHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHH
Confidence 999999999999999887774 33333222 2333455677888888888888888999999999999999877643
No 18
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.75 E-value=1.4e-15 Score=130.80 Aligned_cols=228 Identities=14% Similarity=0.058 Sum_probs=152.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHH
Q 024733 6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVF 85 (263)
Q Consensus 6 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (263)
+.+.+.....-..++.......|+.+++ +| |..+.++|++++.+.+.++.+.++ + +. ++++++.....+++.
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~--~--~~-~~~~~~~~~~~g~~~ 81 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWR--L--RF-AKEQRLPLLFYGVSL 81 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHh--c--cC-CHHHHHHHHHHHHHH
Confidence 4556666555555556666689999998 77 999999999999877665433211 1 11 234455566777777
Q ss_pred HHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeecc--C-CcchHHHHHHHHH
Q 024733 86 CISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG--E-PSFHLFGFLMCIA 162 (263)
Q Consensus 86 ~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~--~-~~~~~~G~~~~l~ 162 (263)
.....+.+++++++|++.+.++..+.|+++++++ +||+++ ..++.++++|+.++... + .+.+..|.+++++
T Consensus 82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~ 155 (293)
T PRK10532 82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALG 155 (293)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHH
Confidence 7777888999999999999999999999999887 366554 44566778999876532 2 2345689999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHH-HHH
Q 024733 163 ATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALA-YFV 241 (263)
Q Consensus 163 a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~ 241 (263)
+++++|.|.+..||.. ++.++... .++...++..+.|.....++ .. ..+...+..++.-++++ ...
T Consensus 156 aa~~~a~~~v~~r~~~----~~~~~~~~-~~~~~~~~~~l~~~~~~~~~-~~-------~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 156 AGACWAIYILSGQRAG----AEHGPATV-AIGSLIAALIFVPIGALQAG-EA-------LWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred HHHHHHHHHHHHHHHh----ccCCchHH-HHHHHHHHHHHHHHHHHccC-cc-------cCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 34556555 45667777777777644322 11 11222221222222222 222
Q ss_pred HHHHHHHHhccCceeEEee
Q 024733 242 NLTNFLVTKHTSALTLQVC 260 (263)
Q Consensus 242 ~~~~~~~~~~~s~~t~sv~ 260 (263)
....+..+++.+|...++.
T Consensus 223 ~~l~~~~~~~~~a~~as~~ 241 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTL 241 (293)
T ss_pred HHHHHHHHHhcChhHHHHH
Confidence 2234677888887665543
No 19
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.75 E-value=1.4e-17 Score=132.97 Aligned_cols=219 Identities=16% Similarity=0.226 Sum_probs=181.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHH
Q 024733 36 FRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFT 115 (263)
Q Consensus 36 f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~ 115 (263)
|.|...+.+.|+....+..-++..++++.+.+ +..-+.+...++-+-+....+|.+++|+|.++..+-|++.|+.+
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D----~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPV 125 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIRKKTEID----NTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPV 125 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeeccccccc----CCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcce
Confidence 88889999999999987765544333322222 22345567778888899999999999999999999999999999
Q ss_pred HHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC-------cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHH
Q 024733 116 AVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP-------SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSM 188 (263)
Q Consensus 116 ~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~ 188 (263)
++++..+.|++++++++..++++++|+++..+.+. +.-..|-++.+++....++....++|.. ..++.+..
T Consensus 126 MilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrir--a~yq~~g~ 203 (337)
T KOG1580|consen 126 MILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIR--ASYQRTGT 203 (337)
T ss_pred eeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHH--HhhccCch
Confidence 99999999999999999999999999999987753 1224799999999999999999999987 77888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeecc
Q 024733 189 NLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLT 262 (263)
Q Consensus 189 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~g~ 262 (263)
.++.|.+.++.+.+-... .++|+.+.+.... +..+..++-+.+-++.+++.+.+.|..+...||+|.|++.+
T Consensus 204 ~MM~~~NlwStL~Lg~g~-lfTGElweF~yF~-~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTT 275 (337)
T KOG1580|consen 204 SMMFYTNLWSTLYLGAGL-LFTGELWEFFYFV-QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTT 275 (337)
T ss_pred hhHHHHHHHHHHHhhhhh-eehhhHHHHHHHH-HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEee
Confidence 999999999998877666 5678877653322 33556777788888999999999999999999999999865
No 20
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.70 E-value=1.2e-14 Score=124.28 Aligned_cols=228 Identities=11% Similarity=-0.005 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhcc
Q 024733 18 SSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLR 97 (263)
Q Consensus 18 ~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~ 97 (263)
++........|...++ -+ +. .+.+.....+.+..+..++..++..+.++++++......++.......+.+.+++
T Consensus 11 ~~~a~~~~~~k~~~~~--~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 85 (281)
T TIGR03340 11 LMHAGWNLMAKSHADK--EP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYH 85 (281)
T ss_pred HHHHHHHHHHhhcCCc--hh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455566766654 12 32 3556655555544444332111111112344555555566667788899999999
Q ss_pred ccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 024733 98 FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP-SFHLFGFLMCIAATAARALKSVLQGI 176 (263)
Q Consensus 98 ~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-~~~~~G~~~~l~a~~~~a~~~v~~k~ 176 (263)
+.+++.++.+.++.|+++++++++++|||+++++++|+.++++|+.+...++. +.+..|..++++++++++.|.+..|+
T Consensus 86 ~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~ 165 (281)
T TIGR03340 86 HADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKA 165 (281)
T ss_pred cCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999999988765442 34567888999999999999998887
Q ss_pred hhccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024733 177 LLSSEGEKLNSM----NLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHT 252 (263)
Q Consensus 177 ~~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 252 (263)
.. ++.++. ..+.+..........+.....+.... . ..+...+..+...++.+..-+...+..+++.
T Consensus 166 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~ 235 (281)
T TIGR03340 166 AA----LGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM-F-----PYARQILPSATLGGLMIGGAYALVLWAMTRL 235 (281)
T ss_pred cc----cchhcccccHHHHHHHHHHHHHHHHHHHHHHhccch-h-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 54 222222 22222222221111121111111110 0 1111223334444444444555567888888
Q ss_pred CceeEEee
Q 024733 253 SALTLQVC 260 (263)
Q Consensus 253 s~~t~sv~ 260 (263)
++...+..
T Consensus 236 ~a~~~~~~ 243 (281)
T TIGR03340 236 PVATVVAL 243 (281)
T ss_pred CceEEEee
Confidence 88766654
No 21
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.2e-16 Score=130.19 Aligned_cols=252 Identities=17% Similarity=0.196 Sum_probs=205.7
Q ss_pred CCchhHHHHHHHHH-HHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHH
Q 024733 2 KSSSKLFTFGLVAA-WYSSNIGVLLLNKYLLSNYGFR-YPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKIS 79 (263)
Q Consensus 2 ~~~~~~~~~~~~~~-~~~~s~~~~~~nK~~l~~~~f~-~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (263)
.+.++|.+.+.|.+ .++.-...-...+++++..+|. +.+.+++.|+++-....++-+. ..++++ +...||...
T Consensus 36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~~~k~---r~iP~rtY~ 110 (367)
T KOG1582|consen 36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LIQTKR---RVIPWRTYV 110 (367)
T ss_pred ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--eecccc---eecchhHhh
Confidence 35678888887665 4455556667888899888886 8899999999877554443222 112222 234577777
Q ss_pred HHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC----cchHH
Q 024733 80 ALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP----SFHLF 155 (263)
Q Consensus 80 ~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~----~~~~~ 155 (263)
..+.+..+.+.++|.|+.|++.+...++|++.-+.+++.+.++-++|++...+.+..+...|.+.....|. ++|..
T Consensus 111 ~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~ 190 (367)
T KOG1582|consen 111 ILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLI 190 (367)
T ss_pred hhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCccee
Confidence 88888889999999999999999999999999999999999999999999999999999999999887774 57889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHH
Q 024733 156 GFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS 235 (263)
Q Consensus 156 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 235 (263)
|+.+.-+|.++.|.-...+++.+ +.++-+..|+++|....+.++++..+ ..+|+..+.|....+.+.....+..+-+
T Consensus 191 Gv~mIsgALl~DA~iGNvQEk~m--~~~~~ss~EmvfySy~iG~vflf~~m-vlTge~f~a~~fcaehp~~tyGy~~~~s 267 (367)
T KOG1582|consen 191 GVMMISGALLADAVIGNVQEKAM--KMNPASSSEMVFYSYGIGFVFLFAPM-VLTGELFSAWTFCAEHPVRTYGYAFLFS 267 (367)
T ss_pred eHHHHHHHHHHHHHhhHHHHHHH--hhCCCCcceEEEeeecccHHHHHHHH-HhcccchhhhHHHHhCcHhHHHHHHHHH
Confidence 99999999999999988888888 66677889999999999999998888 4578877766655565666777888888
Q ss_pred HHHHHHHHHHHHHHhccCceeEEeec
Q 024733 236 ALAYFVNLTNFLVTKHTSALTLQVCL 261 (263)
Q Consensus 236 ~~~~~~~~~~~~~~~~~s~~t~sv~g 261 (263)
..+|+...+-...++..+|.+.+.+.
T Consensus 268 ~~gylG~~~VLalI~~fGA~~aatvT 293 (367)
T KOG1582|consen 268 LAGYLGIVFVLALIKLFGALIAATVT 293 (367)
T ss_pred HHhHhhHHHHHHHHHHhchhHHHHHH
Confidence 88888888888999999998876554
No 22
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.62 E-value=3.5e-14 Score=120.74 Aligned_cols=182 Identities=21% Similarity=0.293 Sum_probs=142.4
Q ss_pred HHHHHHHHHH----HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--
Q 024733 77 KISALSFVFC----ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP-- 150 (263)
Q Consensus 77 ~~~~~~~~~~----~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-- 150 (263)
+..-.+++++ .....+|.|+.+++++..+++.++.-+|+..++.++..||.|..|.+++.+.+.|+++++.+|.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 4555566665 4566788999999999999999999999999999999999999999999999999999987743
Q ss_pred ------cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccc
Q 024733 151 ------SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDD 224 (263)
Q Consensus 151 ------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 224 (263)
+....|.++++++++.||.|.++.||..++++.+.|.-....+..++..+++.|...+.+........ . +..
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~-l-P~~ 314 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFE-L-PSS 314 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc-C-CCC
Confidence 23478999999999999999999999997666799999999999999999999887665433221111 1 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEee
Q 024733 225 VKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVC 260 (263)
Q Consensus 225 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~ 260 (263)
..+-..+..+++..++--+......-.|||++.++.
T Consensus 315 ~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~Tlg 350 (416)
T KOG2765|consen 315 TQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLG 350 (416)
T ss_pred ceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheee
Confidence 222233344455556666666788888888887654
No 23
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.62 E-value=3.8e-14 Score=118.16 Aligned_cols=168 Identities=17% Similarity=0.226 Sum_probs=132.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC
Q 024733 71 SRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP 150 (263)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~ 150 (263)
+|+.++ +...+++|+....+.+.++++++++.+|+++.+..+++++++++++|||.++++|.++.+.++|+.+...++.
T Consensus 14 ~~~~~~-~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 14 PKDTLK-LAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 344444 5556899999999999999999999999999999999999999999999999999999999999998754321
Q ss_pred ---------c--------chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 024733 151 ---------S--------FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNV 213 (263)
Q Consensus 151 ---------~--------~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 213 (263)
+ ....|+...+.++++.++..++.+|.+ |+++.+.+..+.....++.++.++.....|++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~l--K~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~ 170 (244)
T PF04142_consen 93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLL--KRSNVSLWIQNMQLYLFGILFNLLALLLSDGSA 170 (244)
T ss_pred cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 0 125899999999999999999999999 666778888888888888888888775555544
Q ss_pred chhhhhccccchHHHHHHHHHHHHHHHH
Q 024733 214 VGITLALARDDVKIIWYLLFNSALAYFV 241 (263)
Q Consensus 214 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 241 (263)
.........++...+..+...++.|...
T Consensus 171 ~~~~g~f~G~~~~~~~~i~~~a~gGllv 198 (244)
T PF04142_consen 171 ISESGFFHGYSWWVWIVIFLQAIGGLLV 198 (244)
T ss_pred cccCCchhhcchHHHHHHHHHHHhhHHH
Confidence 3322223344555555556666555544
No 24
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.55 E-value=2e-11 Score=104.10 Aligned_cols=180 Identities=18% Similarity=0.178 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHH
Q 024733 8 FTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCI 87 (263)
Q Consensus 8 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (263)
+.......+...+.......|...++ ..+ +....+.|...+....... ..+++...++ ..++.++..+..++....
T Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 82 (292)
T COG0697 7 LGLLALLLWGLLWGLSFIALKLAVES-LDP-FLFAAALRFLIAALLLLPL-LLLEPRGLRP-ALRPWLLLLLLALLGLAL 82 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-cCC-hHHHHHHHHHHHHHHHHHH-HHhhcccccc-cccchHHHHHHHHHHHHH
Confidence 33444444555555555666766665 223 5566666988887662222 2222111111 122233445555666678
Q ss_pred HHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-HHhhcccChhhHHHHhhhhhhheeeeccCCcc---hHHHHHHHHHH
Q 024733 88 SVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAY-LMTLKREAWLTYVTLIPVVTGVIIASGGEPSF---HLFGFLMCIAA 163 (263)
Q Consensus 88 ~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~-~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~---~~~G~~~~l~a 163 (263)
...+.+.++++++++.++.+.++.|+++.++++ +++|||++++++.+..+++.|+.++..++... +..|..+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a 162 (292)
T COG0697 83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAA 162 (292)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHH
Confidence 889999999999999999999999999999997 66799999999999999999999998776543 35899999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCHHHHHH-HHHH
Q 024733 164 TAARALKSVLQGILLSSEGEKLNSMNLLL-YMAP 196 (263)
Q Consensus 164 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~-~~~~ 196 (263)
+++++.+.+..|+.. +.++..... ++..
T Consensus 163 ~~~~a~~~~~~~~~~-----~~~~~~~~~~~~~~ 191 (292)
T COG0697 163 ALLWALYTALVKRLS-----RLGPVTLALLLQLL 191 (292)
T ss_pred HHHHHHHHHHHHHhc-----CCChHHHHHHHHHH
Confidence 999999999999864 445555555 4444
No 25
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.44 E-value=1.5e-12 Score=106.69 Aligned_cols=226 Identities=19% Similarity=0.246 Sum_probs=164.6
Q ss_pred HHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccc-cchh
Q 024733 24 LLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRF-LPVS 102 (263)
Q Consensus 24 ~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~-~~~~ 102 (263)
...-+.+.++ +-..-..+++.|+++.+.-.++.---....| + +...|.++..-..+.....++|.++++ +|.+
T Consensus 19 vv~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~skf~~~k-~----kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~P 92 (330)
T KOG1583|consen 19 VVFLELLVRN-EPGSGNLITFAQFLFIATEGLIFTSKFFTVK-P----KIPLKDYAITVAMFFIVNVTNNYALKFNIPMP 92 (330)
T ss_pred HHHHHHHHHh-CCCCeeehHHHHHHHHHHhceeeeccccccC-C----CCchhhhheehheeeeeeeeccceeeecccce
Confidence 3444555554 2223478999999988766554321111111 2 233444555555566677899999999 7999
Q ss_pred HHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeecc---CCc--------------ch--HHHHHHHHHH
Q 024733 103 FNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG---EPS--------------FH--LFGFLMCIAA 163 (263)
Q Consensus 103 ~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~---~~~--------------~~--~~G~~~~l~a 163 (263)
...++|+-.++.+|++++++.|+|++.+|+.+.+++.+|+.+.+.. |.. .. ..|+.+...|
T Consensus 93 lHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~a 172 (330)
T KOG1583|consen 93 LHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFA 172 (330)
T ss_pred EEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887532 210 11 3688999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhc-----------cccchHHHHHHH
Q 024733 164 TAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLAL-----------ARDDVKIIWYLL 232 (263)
Q Consensus 164 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~ 232 (263)
.+..|...+++++.. +++.-++-|.++|+...+.++.+.. ..+-.+.+... ....+..+.+++
T Consensus 173 l~~sa~mgiyqE~~Y--~kyGKh~~EalFytH~LsLP~Flf~----~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl 246 (330)
T KOG1583|consen 173 LLLSAYMGIYQETTY--QKYGKHWKEALFYTHFLSLPLFLFM----GDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL 246 (330)
T ss_pred HHHHHHHHHHHHHHH--HHhcCChHHHHHHHHHhccchHHHh----cchHHHHHHHHhcCcceeccccCccccHHHHHHH
Confidence 999999999999999 6667799999999998875544332 22221211111 112357889999
Q ss_pred HHHHHHHHHHHHHHHHHhccCceeEEeec
Q 024733 233 FNSALAYFVNLTNFLVTKHTSALTLQVCL 261 (263)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~s~~t~sv~g 261 (263)
.+++.-+++.-.-+.+..+++++|.+++-
T Consensus 247 ~n~L~Qy~CikgVy~L~te~~sLTVTlvl 275 (330)
T KOG1583|consen 247 FNVLTQYFCIKGVYILTTETSSLTVTLVL 275 (330)
T ss_pred HHHHHHHHHHHhhhhhhceecceEEEEee
Confidence 99999999988889999999999999864
No 26
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.41 E-value=8.5e-12 Score=102.48 Aligned_cols=242 Identities=17% Similarity=0.141 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHHHhhh-----CCCCchHHHHHHHHHHHHHHHHHHHHH-HhhcCCc-------ccchhh--H--HHHH
Q 024733 16 WYSSNIGVLLLNKYLLSN-----YGFRYPIFLTMCHMTACSLLSYIAIAW-MKMVPMQ-------TIRSRL--Q--FLKI 78 (263)
Q Consensus 16 ~~~~s~~~~~~nK~~l~~-----~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~--~--~~~~ 78 (263)
..+++...++..||.=+. .+|+.|+..+..- +++-..++.+.+. +++...+ ...+.+ + -+.+
T Consensus 11 mvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~m-FlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lf 89 (372)
T KOG3912|consen 11 MVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLM-FLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLF 89 (372)
T ss_pred hhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHH-HHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCccee
Confidence 344555556778886542 3477888776544 4554333332222 2221111 011111 1 2335
Q ss_pred HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--------
Q 024733 79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP-------- 150 (263)
Q Consensus 79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-------- 150 (263)
++-+++...+..+.+.++.+++++.+|++|....+|+.+++.-+++++++.++|.++..+..|+.++...|.
T Consensus 90 l~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~ 169 (372)
T KOG3912|consen 90 LPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYT 169 (372)
T ss_pred cChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcc
Confidence 567899988999999999999999999999999999999999999999999999999999999988865541
Q ss_pred --cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH----HHHHHHhccccc-----hhhhh
Q 024733 151 --SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLL----LPATLIMEKNVV-----GITLA 219 (263)
Q Consensus 151 --~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l----l~~~~~~~~~~~-----~~~~~ 219 (263)
+.-..|..+.+.|.+.-|.+.++.+|.+ +.++.+|.+...|...++.+.+ .|+.+...+... ..+.+
T Consensus 170 d~s~iitGdllIiiaqiivaiQ~v~Eek~l--~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD 247 (372)
T KOG3912|consen 170 DYSSIITGDLLIIIAQIIVAIQMVCEEKQL--KKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLED 247 (372)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHhhh--hhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhh
Confidence 1225799999999999999999999999 7789999999999999995543 333322222111 11111
Q ss_pred ccc------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCceeEEee
Q 024733 220 LAR------DDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVC 260 (263)
Q Consensus 220 ~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~ 260 (263)
..+ ..+.....+...-+--.++|+.+..+.|..|++|..+.
T Consensus 248 ~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmll 294 (372)
T KOG3912|consen 248 WGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLL 294 (372)
T ss_pred HHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHH
Confidence 110 11111111111112225689999999999999987654
No 27
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.40 E-value=1.1e-12 Score=97.79 Aligned_cols=121 Identities=18% Similarity=0.360 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHH-HHHHHHhhhhhccc
Q 024733 20 NIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISVVFGNVSLRF 98 (263)
Q Consensus 20 s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl~~ 98 (263)
+......+|...++ .| |...+++|+..+.+ ..+.....++.+.++. +++++......+.+ ...+..+.+.++++
T Consensus 3 ~a~~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 77 (126)
T PF00892_consen 3 WAIYSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNL-SPRQWLWLLFLGLLGTALAYLLYFYALKY 77 (126)
T ss_pred eeeHHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCC-ChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence 34566788999998 77 99999999999987 4444444333222222 33444555555655 57899999999999
Q ss_pred cchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheee
Q 024733 99 LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (263)
Q Consensus 99 ~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~ 145 (263)
.+++.++++..+.|+++.+++++++||++++++++++.++++|+.+.
T Consensus 78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998764
No 28
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.37 E-value=5.1e-10 Score=95.51 Aligned_cols=219 Identities=14% Similarity=0.206 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHhhhCC--CCchHHHHHHHHHHHHHHHHHHHHHH-h---hcCCcccc------hhhHHHHHHHHHHHH
Q 024733 18 SSNIGVLLLNKYLLSNYG--FRYPIFLTMCHMTACSLLSYIAIAWM-K---MVPMQTIR------SRLQFLKISALSFVF 85 (263)
Q Consensus 18 ~~s~~~~~~nK~~l~~~~--f~~p~~l~~~r~~~~~~~~~~~~~~~-~---~~~~~~~~------~~~~~~~~~~~~~~~ 85 (263)
.-..++.+..|+.-.+++ |. |.+..++-=++-.+.+....... | .++.+.++ +++..+ +...++.|
T Consensus 25 ~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk-~~vPa~iY 102 (345)
T KOG2234|consen 25 AQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK-VSVPALIY 102 (345)
T ss_pred HHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH-HHHHHHHH
Confidence 445566667777666543 44 55555444444444333322221 1 11111111 223444 45558899
Q ss_pred HHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC-----------CcchH
Q 024733 86 CISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE-----------PSFHL 154 (263)
Q Consensus 86 ~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-----------~~~~~ 154 (263)
++.+.+.+.++.+.+++++|+...+....++++..++++||.++++|.++.+.++|+.+...++ .+..+
T Consensus 103 alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~ 182 (345)
T KOG2234|consen 103 ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPF 182 (345)
T ss_pred HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchh
Confidence 9888899999999999999999999999999999999999999999999999999999876221 12347
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhh-ccccchHHHHHHHH
Q 024733 155 FGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLA-LARDDVKIIWYLLF 233 (263)
Q Consensus 155 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 233 (263)
.|....+.+++..++..++.++.+ |+.+.+.+..+.-...++.++.+......|++... +.. .+.++...|..++.
T Consensus 183 ~G~~avl~~c~~SgfAgvYfEkiL--K~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~-~~gff~G~s~~vw~vVl~ 259 (345)
T KOG2234|consen 183 LGLVAVLVACFLSGFAGVYFEKIL--KGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN-EYGFFYGYSSIVWLVVLL 259 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH--hcCCchHHHHHHHHHHHHHHHHHHHHhhccccccc-cCCccccccHHHHHHHHH
Confidence 899999999999999999999999 77888888888888888888888877666777654 322 33455566666666
Q ss_pred HHHHHHHH
Q 024733 234 NSALAYFV 241 (263)
Q Consensus 234 ~~~~~~~~ 241 (263)
.+.-|.+.
T Consensus 260 ~a~gGLlv 267 (345)
T KOG2234|consen 260 NAVGGLLV 267 (345)
T ss_pred HhccchhH
Confidence 66555443
No 29
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.33 E-value=8.4e-12 Score=96.85 Aligned_cols=107 Identities=35% Similarity=0.562 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccc-----cchHH
Q 024733 156 GFLMCIAATAARALKSVLQGILLSSE---GEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALAR-----DDVKI 227 (263)
Q Consensus 156 G~~~~l~a~~~~a~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-----~~~~~ 227 (263)
|+++++.+.++.|+++++.|+.++++ +++.++.++..|.++.+.+.++|.++..|++.......... .+...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999999999431 36899999999999999999999998888776433221111 14577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCceeEEeecc
Q 024733 228 IWYLLFNSALAYFVNLTNFLVTKHTSALTLQVCLT 262 (263)
Q Consensus 228 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~t~sv~g~ 262 (263)
+..++.+|+.++++|++.+.+++++||+|++++|+
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~ 115 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGN 115 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHH
Confidence 88899999999999999999999999999999885
No 30
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.30 E-value=7.4e-10 Score=95.08 Aligned_cols=167 Identities=18% Similarity=0.133 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhh
Q 024733 15 AWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNV 94 (263)
Q Consensus 15 ~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (263)
.-.+++.+.....|.+- +.+ +.... |..++.+....+....+. +++ +.++.+..-+..|+..+.+..+...
T Consensus 8 ia~~~wGs~g~~~k~~~---g~~-~~~~~--~~~~g~l~~~~~~~~~~~-~~~--~~~~~~~~g~l~G~~w~ig~~~~~~ 78 (290)
T TIGR00776 8 IPALFWGSFVLINVKIG---GGP-YSQTL--GTTFGALILSIAIAIFVL-PEF--WALSIFLVGLLSGAFWALGQINQFK 78 (290)
T ss_pred HHHHHHhhhHHHHhccC---CCH-HHHHH--HHHHHHHHHHHHHHHHhC-Ccc--cccHHHHHHHHHHHHHHhhhhhHHH
Confidence 33444556666667765 365 43332 677776665544333331 211 2233344445556667888899999
Q ss_pred hccccchhHHHHHhh-hHHHHHHHHHHHHhhcccChhh----HHHHhhhhhhheeeeccCCc-------ch-HHHHHHHH
Q 024733 95 SLRFLPVSFNQAVGA-TTPFFTAVFAYLMTLKREAWLT----YVTLIPVVTGVIIASGGEPS-------FH-LFGFLMCI 161 (263)
Q Consensus 95 sl~~~~~~~~~vi~~-~~pi~~~i~~~~~~~~~~~~~~----~~~~~l~~~Gv~l~~~~~~~-------~~-~~G~~~~l 161 (263)
|.++++++.+..+-+ +.|+++.+.+.+++|||.++++ ++++++.++|+.+....+.+ .+ .+|.++++
T Consensus 79 ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l 158 (290)
T TIGR00776 79 SMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLL 158 (290)
T ss_pred HHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHH
Confidence 999999999999988 8888999999999999999999 99999999999988653311 33 68999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHH
Q 024733 162 AATAARALKSVLQGILLSSEGEKLNSMNLLLYMAP 196 (263)
Q Consensus 162 ~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~ 196 (263)
+++++|+.|.+..|+. +.||.+..+.+..
T Consensus 159 ~sg~~y~~~~~~~~~~------~~~~~~~~~~~~~ 187 (290)
T TIGR00776 159 MSTIGYLVYVVVAKAF------GVDGLSVLLPQAI 187 (290)
T ss_pred HHHHHHHHHHHHHHHc------CCCcceehhHHHH
Confidence 9999999999999973 3677777444443
No 31
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.29 E-value=4.2e-11 Score=87.19 Aligned_cols=133 Identities=14% Similarity=0.025 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHH
Q 024733 11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVV 90 (263)
Q Consensus 11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (263)
.+...-.+......++.|.-+++ .| |.+-+++|.+...+.+..+....|+.+...--.++.|......|+..+.+..
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence 34444555666777899999998 55 9999999999988877776665554332211133456666677777788999
Q ss_pred hhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 91 FGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 91 ~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
+++.+++-.++|...-+-.+.|.++.+++++++|||+|.++++|+.++.+|+.+.+
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999999999999999998875
No 32
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.26 E-value=1.4e-11 Score=100.00 Aligned_cols=224 Identities=15% Similarity=0.165 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhc
Q 024733 17 YSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSL 96 (263)
Q Consensus 17 ~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl 96 (263)
.++..+..+.+.++-+. +.+-|...+++....-+++--.+..+++ + .-+..|++.+..++...=+......|.
T Consensus 27 SL~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~----~~~~~~~hYilla~~DVEaNy~vV~Ay 99 (336)
T KOG2766|consen 27 SLLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--K----YIKAKWRHYILLAFVDVEANYFVVKAY 99 (336)
T ss_pred HHHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--H----HHHHHHHHhhheeEEeecccEEEeeeh
Confidence 35556666777887765 4777887777766544333222222222 1 134456667777777666677778899
Q ss_pred cccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--------cchHHHHHHHHHHHHHHH
Q 024733 97 RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP--------SFHLFGFLMCIAATAARA 168 (263)
Q Consensus 97 ~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~a~~~~a 168 (263)
||++....+.+-+-..+.+++++|+++|.|+...++.|++++++|+.+....|. +...+|.+++++++.+||
T Consensus 100 QyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYa 179 (336)
T KOG2766|consen 100 QYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYA 179 (336)
T ss_pred hhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeee
Confidence 999999999999999999999999999999999999999999999999877652 234689999999999999
Q ss_pred HHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHHHHHHHHHH-HH
Q 024733 169 LKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTN-FL 247 (263)
Q Consensus 169 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~ 247 (263)
..++..+.+. ++.+..+++....+++++...+= +..|..+.. .-+||.....++. .. +..++-++. =.
T Consensus 180 VSNv~EEflv----kn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~----tl~w~~~i~~yl~-f~-L~MFllYsl~pi 248 (336)
T KOG2766|consen 180 VSNVSEEFLV----KNADRVELMGFLGLFGAIISAIQ-FIFERHHVS----TLHWDSAIFLYLR-FA-LTMFLLYSLAPI 248 (336)
T ss_pred eccccHHHHH----hcCcHHHHHHHHHHHHHHHHHHH-Hhhhcccee----eEeehHHHHHHHH-HH-HHHHHHHHhhHH
Confidence 9999999888 68899999999999998887766 355555532 2245544444444 22 222222332 35
Q ss_pred HHhccCceeEE
Q 024733 248 VTKHTSALTLQ 258 (263)
Q Consensus 248 ~~~~~s~~t~s 258 (263)
++|..|++.+.
T Consensus 249 l~k~~~aT~~n 259 (336)
T KOG2766|consen 249 LIKTNSATMFN 259 (336)
T ss_pred heecCCceEEE
Confidence 56666766554
No 33
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.19 E-value=1.4e-08 Score=84.56 Aligned_cols=191 Identities=11% Similarity=0.012 Sum_probs=137.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-cc-cchhhHHHHH
Q 024733 1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-QT-IRSRLQFLKI 78 (263)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ 78 (263)
|+ ....+.+.....-++.++.+-++.|.+-. .| +..+..-|.+.+.....++....|+.+. .+ .++.+.+...
T Consensus 1 ~~-~~~~~Gil~~l~Ay~lwG~lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~ 75 (293)
T COG2962 1 MA-KDSRKGILLALLAYLLWGLLPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLML 75 (293)
T ss_pred CC-CcccchhHHHHHHHHHHHHHHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHH
Confidence 44 33456666666777788888888888754 66 8899999998887665554444332211 11 1112234444
Q ss_pred HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCcchHHHHH
Q 024733 79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFL 158 (263)
Q Consensus 79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~ 158 (263)
...++.-+.+.+.+.+|.....+-.+++--...|++..+++.+++|||+++.|++++.+..+||..-.....+.++....
T Consensus 76 ~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~ 155 (293)
T COG2962 76 ALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALA 155 (293)
T ss_pred HHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHH
Confidence 55566667888999999999888888888999999999999999999999999999999999999887777778876665
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024733 159 MCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPAT 206 (263)
Q Consensus 159 ~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 206 (263)
+ ++++++|...-|+ .++|+.+....-...-.+..+...
T Consensus 156 l----a~sf~~Ygl~RK~------~~v~a~~g~~lE~l~l~p~al~yl 193 (293)
T COG2962 156 L----ALSFGLYGLLRKK------LKVDALTGLTLETLLLLPVALIYL 193 (293)
T ss_pred H----HHHHHHHHHHHHh------cCCchHHhHHHHHHHHhHHHHHHH
Confidence 4 5688999865555 357777666655544444444443
No 34
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.18 E-value=8.2e-11 Score=86.71 Aligned_cols=107 Identities=15% Similarity=0.205 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-ccchhhHHHHHHHHHHHH-HHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHH
Q 024733 44 MCHMTACSLLSYIAIAWMKMVPMQ-TIRSRLQFLKISALSFVF-CISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYL 121 (263)
Q Consensus 44 ~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~ 121 (263)
.+|+.++.+.+..+...+++.++. +..+++.+......+... ..+..+..+|+++.+ +.+..+.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 478888877766655543322111 111223344445546555 488899999999999 58889999999999999999
Q ss_pred HhhcccChhhHHHHhhhhhhheeeeccCCc
Q 024733 122 MTLKREAWLTYVTLIPVVTGVIIASGGEPS 151 (263)
Q Consensus 122 ~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~ 151 (263)
++|||++++++.++.++++|+.++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999877754
No 35
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.14 E-value=6.8e-12 Score=102.42 Aligned_cols=192 Identities=16% Similarity=0.215 Sum_probs=138.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHH
Q 024733 2 KSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISAL 81 (263)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (263)
|++++....+.... ++.+.++.+..|.+..+ |..+.-.|++.-.+..+....+ .+.+. ..++..++.++..
T Consensus 33 ~d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~-----p~e~a~~r~l~~mlit~pcliy-~~~~v--~gp~g~R~~LiLR 103 (346)
T KOG4510|consen 33 KDKPNLGLLLLTVS-YFFNSCMVVSTKVLEND-----PMELASFRLLVRMLITYPCLIY-YMQPV--IGPEGKRKWLILR 103 (346)
T ss_pred cCCCccCceehhhH-HHHhhHHHhhhhhhccC-----hhHhhhhhhhhehhhhheEEEE-Eeeee--ecCCCcEEEEEee
Confidence 34555666666666 66777777777776543 8888888866554443332111 11111 0111222334455
Q ss_pred HHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC-----C------
Q 024733 82 SFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE-----P------ 150 (263)
Q Consensus 82 ~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-----~------ 150 (263)
++....+....++|++|.+.+.+.+|....|.++.+++|.++|||.|+...++..+.+.||.++.-++ .
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~ 183 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDS 183 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccc
Confidence 77777788899999999999999999999999999999999999999999999999999999986432 1
Q ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024733 151 ---SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPAT 206 (263)
Q Consensus 151 ---~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 206 (263)
+.+.+|...++.+++..|--.++.|++- ++.|....+.|-...+.+..+...
T Consensus 184 s~~~~~~~gt~aai~s~lf~asvyIilR~iG----k~~h~~msvsyf~~i~lV~s~I~~ 238 (346)
T KOG4510|consen 184 SQVEYDIPGTVAAISSVLFGASVYIILRYIG----KNAHAIMSVSYFSLITLVVSLIGC 238 (346)
T ss_pred ccccccCCchHHHHHhHhhhhhHHHHHHHhh----ccccEEEEehHHHHHHHHHHHHHH
Confidence 2345788888888888888888888865 566767677777777766665554
No 36
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.14 E-value=1.3e-08 Score=82.91 Aligned_cols=165 Identities=18% Similarity=0.143 Sum_probs=130.4
Q ss_pred HHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHH
Q 024733 26 LNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQ 105 (263)
Q Consensus 26 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~ 105 (263)
+.|.++.. ++ |.-.+.+|..++++++..+.|..+++ ..+++++.....|......+.+++.|++.+|.+.+.
T Consensus 30 ~Ak~LFP~--vG-~~g~t~lRl~~aaLIll~l~RPwr~r-----~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAV 101 (292)
T COG5006 30 FAKSLFPL--VG-AAGVTALRLAIAALILLALFRPWRRR-----LSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAV 101 (292)
T ss_pred HHHHHccc--cC-hhhHHHHHHHHHHHHHHHHhhHHHhc-----cChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Confidence 55888877 44 89999999999998877766644322 245678888999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee--ccC-CcchHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 024733 106 AVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS--GGE-PSFHLFGFLMCIAATAARALKSVLQGILLSSEG 182 (263)
Q Consensus 106 vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~--~~~-~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~ 182 (263)
-+-.+-|+.++.++ .||. +..+.+.+.+.|+.+.. .++ .+.|+.|..+++.+..+|+.|.+..||.-
T Consensus 102 AiEF~GPL~vA~~~----sRr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g---- 171 (292)
T COG5006 102 AIEFTGPLAVALLS----SRRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAG---- 171 (292)
T ss_pred hhhhccHHHHHHHh----ccch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhc----
Confidence 99999999887654 3444 34444555666776553 222 45789999999999999999999999965
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 024733 183 EKLNSMNLLLYMAPIAVVLLLPATLI 208 (263)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~ll~~~~~ 208 (263)
...+....+..-...+++..+|+...
T Consensus 172 ~~~~g~~g~a~gm~vAaviv~Pig~~ 197 (292)
T COG5006 172 RAEHGTAGVAVGMLVAALIVLPIGAA 197 (292)
T ss_pred ccCCCchHHHHHHHHHHHHHhhhhhh
Confidence 35567778888899999999999853
No 37
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.04 E-value=1.4e-08 Score=85.63 Aligned_cols=134 Identities=13% Similarity=0.042 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHH-
Q 024733 6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV- 84 (263)
Q Consensus 6 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 84 (263)
..+...+...-.++........|...++.+.+ +.....+|+.++.+.+.......+. + +.. +++.+...+..+++
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGP-N-PQA-LSLQWGALLYLGLIG 201 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCC-C-CCc-chHHHHHHHHHHHHH
Confidence 34555555566667777778889988764333 4455557888887776655443321 1 121 23344444445554
Q ss_pred HHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhe
Q 024733 85 FCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVI 143 (263)
Q Consensus 85 ~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~ 143 (263)
...+..+.++++++.+++.++.+..+.|+++++++++++||+++..++.|..+++.|+.
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 46888999999999999999999999999999999999999999999999999999863
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.72 E-value=2.3e-08 Score=78.49 Aligned_cols=106 Identities=16% Similarity=0.223 Sum_probs=95.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC--
Q 024733 73 LQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP-- 150 (263)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-- 150 (263)
...++..|.+++-.+....+..+++.++++.++-+.++.-.|+.++++..+|+|...-++++.++.+.|+.++.+.|.
T Consensus 51 ~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~ 130 (290)
T KOG4314|consen 51 LFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH 130 (290)
T ss_pred eeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence 334555677777778888888999999999999999999999999999999999999999999999999999997764
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024733 151 SFHLFGFLMCIAATAARALKSVLQGILL 178 (263)
Q Consensus 151 ~~~~~G~~~~l~a~~~~a~~~v~~k~~~ 178 (263)
..++.|+..++++++..|+|-+..|+..
T Consensus 131 a~e~iGi~~AV~SA~~aAlYKV~FK~~i 158 (290)
T KOG4314|consen 131 ADEIIGIACAVGSAFMAALYKVLFKMFI 158 (290)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999998
No 39
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.68 E-value=8.1e-07 Score=78.36 Aligned_cols=134 Identities=8% Similarity=0.040 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCc--ccchhhHHHHHHHHHHHHHHHH
Q 024733 12 LVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQ--TIRSRLQFLKISALSFVFCISV 89 (263)
Q Consensus 12 ~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 89 (263)
..+.-.+++...++..|...++ +|.+...++++..++.+...+........+.+ ...........+..++..++.+
T Consensus 193 l~l~aa~~wa~~~il~~~~~~~--~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t~lay 270 (358)
T PLN00411 193 LLTIQGIFVSVSFILQAHIMSE--YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIITSVYY 270 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHHHHHH
Confidence 3333445555666777887776 66456778888887766654433332211111 0001111111222344445678
Q ss_pred HhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 90 VFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 90 ~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
.+.++++++.+++.+.+...+.|++++++++++++|+++..+++|.++++.|+.+...
T Consensus 271 ~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 271 VIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW 328 (358)
T ss_pred HHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999988753
No 40
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.58 E-value=1.7e-06 Score=74.34 Aligned_cols=132 Identities=13% Similarity=0.049 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHH-HHHHH
Q 024733 11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISV 89 (263)
Q Consensus 11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 89 (263)
+....-.++.......+|..-+. + +...+.+|+.++...+.+.....+. +....++.+.+......+++ ..+.+
T Consensus 153 l~~l~a~~~~a~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~i~~s~~~~ 227 (292)
T PRK11272 153 ILILIASASWAFGSVWSSRLPLP---V-GMMAGAAEMLAAGVVLLIASLLSGE-RLTALPTLSGFLALGYLAVFGSIIAI 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC---c-chHHHHHHHHHHHHHHHHHHHHcCC-cccccCCHHHHHHHHHHHHHHHHHHH
Confidence 33333334444445556664321 2 5567788888887766554333221 11111223445555555654 45788
Q ss_pred HhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 90 VFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 90 ~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
.+.++++++.+++.+.++..++|++.+++++++++|+++..+++|..+++.|+.+...
T Consensus 228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999987654
No 41
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.52 E-value=1.4e-06 Score=63.83 Aligned_cols=64 Identities=11% Similarity=0.131 Sum_probs=59.3
Q ss_pred HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
+++.....+...+++..|.+.+..+-++.|+++.+.+++++|||++.++++|+.++++|+.+..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4466788899999999999999999999999999999999999999999999999999997754
No 42
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.50 E-value=5.2e-06 Score=71.42 Aligned_cols=130 Identities=10% Similarity=-0.000 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHH-HHH
Q 024733 10 FGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVF-CIS 88 (263)
Q Consensus 10 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 88 (263)
.+....-.++.....+..|...++ .+ |.... .+..++.+.+..+...... ... .+...+...+..+++. .+.
T Consensus 150 ~ll~l~aa~~~a~~~v~~r~~~~~--~~-~~~~~-~~~~~~~~~l~~~~~~~~~--~~~-~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 150 AALALGAGACWAIYILSGQRAGAE--HG-PATVA-IGSLIAALIFVPIGALQAG--EAL-WHWSILPLGLAVAILSTALP 222 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--CC-chHHH-HHHHHHHHHHHHHHHHccC--ccc-CCHHHHHHHHHHHHHHHHHH
Confidence 334444445555666777887665 44 66554 4555555554443333221 111 1222333334445544 578
Q ss_pred HHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 89 VVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 89 ~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
+.+.++++++.+++.++++..++|++..++++++++|+++..+++|..++++|+....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999987763
No 43
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.48 E-value=1.4e-05 Score=61.72 Aligned_cols=132 Identities=10% Similarity=0.045 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHHHHhhh-----CCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-cc---c-----c-hhhHHHHH
Q 024733 14 AAWYSSNIGVLLLNKYLLSN-----YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-QT---I-----R-SRLQFLKI 78 (263)
Q Consensus 14 ~~~~~~s~~~~~~nK~~l~~-----~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~~---~-----~-~~~~~~~~ 78 (263)
+....+...-....|..+++ .+.+ |..+.......+.+.+.+.....+..+. +. . . ..+.+...
T Consensus 6 l~s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (153)
T PF03151_consen 6 LASSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLL 84 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHH
Confidence 34445555666677887777 4677 8888777777777766665544332221 00 0 0 11333334
Q ss_pred HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
+..++.........+..++++++-..++......+.+.++++++++|+++..++.|+.+.++|+.+.+
T Consensus 85 ~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 85 ILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 44455556777888899999999999999999999999999999999999999999999999998764
No 44
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.44 E-value=1.2e-05 Score=69.31 Aligned_cols=139 Identities=17% Similarity=0.069 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcC-----CcccchhhHHHHHHHHH
Q 024733 8 FTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVP-----MQTIRSRLQFLKISALS 82 (263)
Q Consensus 8 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 82 (263)
........-.++.....+..|...++++-+.......++...+.+.........+... .... +.+.+...+..+
T Consensus 143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~ 221 (299)
T PRK11453 143 LGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTI-DMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccC-CHHHHHHHHHHH
Confidence 3444455555666667777888765422121344455566555443332222221111 0111 223344444445
Q ss_pred HHH-HHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 83 FVF-CISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 83 ~~~-~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
++- .+.+.+.+.++++.+++.+..+..++|++..++++++++|+++..+++|..++++|+.+...
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 443 57888999999999999999999999999999999999999999999999999999977643
No 45
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.43 E-value=2.4e-06 Score=73.82 Aligned_cols=137 Identities=9% Similarity=-0.075 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhh---------HHHHHH
Q 024733 9 TFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRL---------QFLKIS 79 (263)
Q Consensus 9 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 79 (263)
....+.....+.....+..|...++.+.+ |..++..+...+.+.+.+.....+..+.......+ .+...+
T Consensus 146 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
T TIGR00817 146 GFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL 224 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence 33444455555566667788887743466 88999999988887766655433211100000000 011111
Q ss_pred HHHH-HHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 80 ALSF-VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 80 ~~~~-~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
..+. ++...+.+.+.+++++++..+++.....|+++.++++++++|+++..+++|..++++|+.+..
T Consensus 225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 2222 222233466679999999999999999999999999999999999999999999999998764
No 46
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.42 E-value=1.9e-06 Score=73.64 Aligned_cols=70 Identities=14% Similarity=0.139 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhee
Q 024733 75 FLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVII 144 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l 144 (263)
+......++...+.+.+.++++++.+++.......++|++..+++++++||+++..+++|..++++|+.+
T Consensus 211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 3333444455567889999999999999999999999999999999999999999999999999999865
No 47
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.39 E-value=8.6e-06 Score=70.15 Aligned_cols=128 Identities=13% Similarity=0.056 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHH
Q 024733 11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVV 90 (263)
Q Consensus 11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (263)
.....-..++...++.+|..-++ .+ |.... . ..+...+.+.....+ .+....+ .+.+...+..++...+.+.
T Consensus 159 ~~~l~aa~~~A~~~v~~k~~~~~--~~-~~~~~--~-~~~~~~l~~~~~~~~-~~~~~~~-~~~~~~l~~~~~~t~~~~~ 230 (295)
T PRK11689 159 GLAFIGAFIWAAYCNVTRKYARG--KN-GITLF--F-ILTALALWIKYFLSP-QPAMVFS-LPAIIKLLLAAAAMGFGYA 230 (295)
T ss_pred HHHHHHHHHHHHHHHHHhhccCC--CC-chhHH--H-HHHHHHHHHHHHHhc-CccccCC-HHHHHHHHHHHHHHHHHHH
Confidence 34444455566667778887655 33 55432 2 222222222122222 1111222 2334444455555567889
Q ss_pred hhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 91 FGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 91 ~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
+.++++++.+++.++.+..+.|++..++++++++|+++..+++|..+++.|+.+..
T Consensus 231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 99999999999999999999999999999999999999999999999999987654
No 48
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.20 E-value=2.9e-06 Score=69.99 Aligned_cols=156 Identities=13% Similarity=0.049 Sum_probs=95.2
Q ss_pred cchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC-------------------C--------c
Q 024733 99 LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE-------------------P--------S 151 (263)
Q Consensus 99 ~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~-------------------~--------~ 151 (263)
+++|.....++..|+++++.++...+||++..++++..+...|+......| . .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 467888899999999999999999999999999999999999987532211 0 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHH
Q 024733 152 FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYL 231 (263)
Q Consensus 152 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l 231 (263)
..+.|....+.+..+.++..++.++.. ++++......+.....++.+.........+++..........++...+...
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~--k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKIL--KDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG 159 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcc--cCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH
Confidence 236788888889999999999999987 443333333343333444333222222222222111111122333344444
Q ss_pred HHHHHHHHHHHHHHHHHHhccCceeEEee
Q 024733 232 LFNSALAYFVNLTNFLVTKHTSALTLQVC 260 (263)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~s~~t~sv~ 260 (263)
..+++.+.+ ...++|..++++.+++
T Consensus 160 ~~~a~~~~~----v~~vlk~~~~~~~~~~ 184 (222)
T TIGR00803 160 LLNVGGGLC----IGGVVRYADNTTKSFV 184 (222)
T ss_pred HHHHhcCce----eeehhHHhHHHHHHHH
Confidence 444433333 3566777776655443
No 49
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.19 E-value=7.6e-05 Score=65.88 Aligned_cols=138 Identities=12% Similarity=0.028 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCC-----CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCc--------ccchhh
Q 024733 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYG-----FRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQ--------TIRSRL 73 (263)
Q Consensus 7 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~-----f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 73 (263)
+.....+..-.+++....+..|...++.+ .+ +..+...+...+.+.+.++....+..+.. ..+..
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~- 270 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNY- 270 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhccccc-
Confidence 33445555556677777788888887542 44 55566666777776666544322211000 00000
Q ss_pred HHHHHHHHHHHHHHHHHhhh----hhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 74 QFLKISALSFVFCISVVFGN----VSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~----~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
.+.......+..++.+.+.| .+++.+++..+++...+.|+++.++++++++|+++..+++|..++++|+.+.+
T Consensus 271 ~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 271 TKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 11112222223344444555 69999999999999999999999999999999999999999999999997754
No 50
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.10 E-value=9.1e-05 Score=63.81 Aligned_cols=69 Identities=13% Similarity=0.013 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
....++...+.+.+.+.++++.+++..+.+....|++..++++++++|+++..+++|..++++|+.+..
T Consensus 216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 334455556889999999999999999999999999999999999999999999999999988887653
No 51
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.95 E-value=0.0002 Score=61.57 Aligned_cols=129 Identities=9% Similarity=0.041 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHH---HHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHH
Q 024733 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMT---ACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSF 83 (263)
Q Consensus 7 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (263)
.|.+.+...-.++-......+|.. +.+ |...++.|.. +++.+.... . ++ . ++...+..+ .....|+
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~----~~~-~~~~~~~~~~g~~~~~~~~~~~-~-~~--~-~~~~~~~~~-~~~~~Gi 219 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF----GVD-GLSVLLPQAIGMVIGGIIFNLG-H-IL--A-KPLKKYAIL-LNILPGL 219 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc----CCC-cceehhHHHHHHHHHHHHHHHH-H-hc--c-cchHHHHHH-HHHHHHH
Confidence 555555555555555666677754 255 7777656654 222222211 1 11 1 111223333 3444777
Q ss_pred HHHHHHHhhhhhcc-ccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhH----HHHhhhhhhheeee
Q 024733 84 VFCISVVFGNVSLR-FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTY----VTLIPVVTGVIIAS 146 (263)
Q Consensus 84 ~~~~~~~~~~~sl~-~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~----~~~~l~~~Gv~l~~ 146 (263)
+....+.++..+.+ +.+++.+.++-+..|+...+.+++++||+.+++++ +|.++++.|+.+..
T Consensus 220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 77888889999999 99999999999999999999999999999999999 99999999987754
No 52
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.87 E-value=0.00078 Score=57.15 Aligned_cols=132 Identities=19% Similarity=0.153 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHH-HHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHH
Q 024733 8 FTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTM-CHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFC 86 (263)
Q Consensus 8 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (263)
........-.++.......+|.+. + .+ +..... .++. ....... .......+ .. .....+......+++..
T Consensus 154 ~g~~~~l~a~~~~a~~~~~~~~~~-~--~~-~~~~~~~~~~~-~~~~~~~-~~~~~~~~-~~-~~~~~~~~~~~~g~~~~ 225 (292)
T COG0697 154 LGLLLALAAALLWALYTALVKRLS-R--LG-PVTLALLLQLL-LALLLLL-LFFLSGFG-AP-ILSRAWLLLLYLGVFST 225 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-C--CC-hHHHHHHHHHH-HHHHHHH-HHHhcccc-cc-CCHHHHHHHHHHHHHHH
Confidence 344444444455556666777776 3 33 555554 4544 2221111 11111111 11 23344555666666665
Q ss_pred -HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 87 -ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 87 -~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
..+.+.+++++..+++..+.+..+.|++.+++++++++|+++..+++|..+++.|+.+...
T Consensus 226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~ 287 (292)
T COG0697 226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence 5889999999999999999999999999999999999999999999999999999877653
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.83 E-value=7.8e-05 Score=55.97 Aligned_cols=72 Identities=14% Similarity=0.053 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHH--HhhcccChhhHHHHhhhhhhheeeeccC
Q 024733 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYL--MTLKREAWLTYVTLIPVVTGVIIASGGE 149 (263)
Q Consensus 78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~--~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 149 (263)
....-.++.+++.+.+.+++..+++.+.-+.+..+..+.+.++. ++||++|..+++|+.++++|+.+...++
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 33344566789999999999999999999999999889888885 8999999999999999999998876443
No 54
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.79 E-value=0.00053 Score=56.40 Aligned_cols=127 Identities=10% Similarity=0.014 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHH-HHHH
Q 024733 11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVF-CISV 89 (263)
Q Consensus 11 ~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 89 (263)
.+.+.-..++.++++..|.+-+. -+ ...-+..-+..++++...+..... .+.+.+..-...-+..+++. ++.+
T Consensus 151 ~~Al~AG~~Wa~YIv~G~r~g~~--~~-g~~g~a~gm~vAaviv~Pig~~~a---g~~l~~p~ll~laLgvavlSSalPY 224 (292)
T COG5006 151 ALALGAGACWALYIVLGQRAGRA--EH-GTAGVAVGMLVAALIVLPIGAAQA---GPALFSPSLLPLALGVAVLSSALPY 224 (292)
T ss_pred HHHHHHhHHHHHHHHHcchhccc--CC-CchHHHHHHHHHHHHHhhhhhhhc---chhhcChHHHHHHHHHHHHhcccch
Confidence 34445557777888888888753 22 233344666667666555443211 11111112233333344544 3788
Q ss_pred HhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhe
Q 024733 90 VFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVI 143 (263)
Q Consensus 90 ~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~ 143 (263)
.++..++..+|...+.++.++.|.+.++.++++++|++|..||+++..++.+..
T Consensus 225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998887765
No 55
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.60 E-value=0.00065 Score=50.15 Aligned_cols=70 Identities=13% Similarity=0.288 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
.....++++.++.+...+++++|.+.+--+ ....-+.+.+.+.++++|+++..+++++.++++|+..+..
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 445567778899999999999999998777 4688999999999999999999999999999999987754
No 56
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.59 E-value=0.002 Score=56.18 Aligned_cols=142 Identities=11% Similarity=0.082 Sum_probs=90.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchh-hHHHHHHHHHH
Q 024733 5 SKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSR-LQFLKISALSF 83 (263)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 83 (263)
++.+.-+.+..-...-...++..|...++ .| +....+.=.+++.++..+.....++..-++.++. +..-..+..++
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~--~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~ 241 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVKK--AP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL 241 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhccc--CC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH
Confidence 34444444444445555556677888877 45 4444444444555444433332222222222221 11222222233
Q ss_pred HHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC
Q 024733 84 VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE 149 (263)
Q Consensus 84 ~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 149 (263)
+....+.+....++..++....+-..+..++.++++.+++|+++++..++|.+++++|..+....+
T Consensus 242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 333444556778889999999999999999999999999999999999999999999999987654
No 57
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.52 E-value=0.0046 Score=53.31 Aligned_cols=64 Identities=20% Similarity=0.336 Sum_probs=58.8
Q ss_pred HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
+.+.++..+...|+.+.|.+..+-+.+..-++.++++..++|||++++.+.|..+++.|..++.
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 4556777888899999999999999999999999999999999999999999999999997754
No 58
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.47 E-value=0.021 Score=48.22 Aligned_cols=128 Identities=15% Similarity=0.072 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHh-hhHHHHHHHHHHHHhhcccChhhHH----HHhhhhhhheeeec
Q 024733 73 LQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYV----TLIPVVTGVIIASG 147 (263)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~-~~~pi~~~i~~~~~~~~~~~~~~~~----~~~l~~~Gv~l~~~ 147 (263)
+.+...+..|++.+++....+.|.++..+|.+--+. ..+-+.+.+++.++++|-.+..+++ +++++++|+.+.+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 445556677888899999999999999888776664 5566778899999999976666544 88899999999887
Q ss_pred cCCc--------chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024733 148 GEPS--------FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPAT 206 (263)
Q Consensus 148 ~~~~--------~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 206 (263)
.|.+ ....|+...+++.+.|..|.+..|. .+.|+++...=++..-.+.-+.+.
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~------~~~~~~~~~lPqaiGm~i~a~i~~ 183 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA------FHVSGWSAFLPQAIGMLIGAFIFN 183 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh------cCCChhHhHHHHHHHHHHHHHHHh
Confidence 6532 1257999999999999999988766 357888877766554444444444
No 59
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.43 E-value=0.0015 Score=47.57 Aligned_cols=69 Identities=12% Similarity=0.261 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 79 SALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
...-+++..++.+...+++.+|.+.+--+ ....-+.+.+.+++++||+++..+++++.++++|+.....
T Consensus 34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34456677888888899999999998777 4477888999999999999999999999999999988754
No 60
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.42 E-value=0.0042 Score=53.71 Aligned_cols=138 Identities=12% Similarity=0.062 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHH--Hhh-cCCccc--chhhHHHHHHHHHH
Q 024733 9 TFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW--MKM-VPMQTI--RSRLQFLKISALSF 83 (263)
Q Consensus 9 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~--~~~-~~~~~~--~~~~~~~~~~~~~~ 83 (263)
.+..+..+.++.......+|.++++++.+ |....+..-.++.+...+.... .+. .+..+. ...+.+...+..++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~ 233 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL 233 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence 55666777888888888999999987777 7777777777776655544433 111 111100 11234455555566
Q ss_pred HHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 84 VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 84 ~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
.......+.+.-.+..++-..+++..+.-+.+.+++.++++++++..+|.|+.+++.|..+-..
T Consensus 234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence 6666666667778889999999999999999999999999999999999999999999877543
No 61
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.41 E-value=0.0014 Score=46.96 Aligned_cols=70 Identities=14% Similarity=0.089 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhHHH-HHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 78 ISALSFVFCISVVFGNVSLRFLPVSFNQ-AVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~-vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
.+..-+++..++.+...|++++|.+.+- +-...-...+.+.++++++|+.+..+++++.++++|+.....
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 4445667788899999999999999864 446677889999999999999999999999999999987643
No 62
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.37 E-value=0.0025 Score=45.95 Aligned_cols=69 Identities=16% Similarity=0.122 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
.+...+++..++.+...+++.+|.+.+--+ -..-.+.+.+.+++++||++++.+++++.++++|+....
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 344566778888888999999999987555 557789999999999999999999999999999998764
No 63
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.31 E-value=0.0047 Score=44.80 Aligned_cols=68 Identities=10% Similarity=0.058 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheee
Q 024733 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (263)
Q Consensus 78 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~ 145 (263)
.....+++..++.+...+++.+|.+.+--+ -....+.+.+.+.+++||+++..+++++.++++|+...
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 444566677888889999999999987555 55778899999999999999999999999999999765
No 64
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.97 E-value=0.0083 Score=42.29 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhhhhhccccchhHHHH-HhhhHHHHHHHHHHHHhhcccChhhHHHHhhh
Q 024733 81 LSFVFCISVVFGNVSLRFLPVSFNQA-VGATTPFFTAVFAYLMTLKREAWLTYVTLIPV 138 (263)
Q Consensus 81 ~~~~~~~~~~~~~~sl~~~~~~~~~v-i~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~ 138 (263)
...++..++.+...+++++|.+.+-- ......+.+.+.+.+++||+.|..+++++.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 34477888899999999999999844 56689999999999999999999999998763
No 65
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.93 E-value=0.035 Score=46.89 Aligned_cols=111 Identities=11% Similarity=0.009 Sum_probs=81.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhcCC-cccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHH
Q 024733 36 FRYPIFLTMCHMTACSLLSYIAIAWMKMVPM-QTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFF 114 (263)
Q Consensus 36 f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~ 114 (263)
.| +.+-.++....-......+..+....++ -.......+..+...|...++...++..|-+.+|.++..++.+..|..
T Consensus 172 v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl 250 (293)
T COG2962 172 VD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTL 250 (293)
T ss_pred Cc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 44 5555556665555554444443322221 000123445666677888999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 115 TAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 115 ~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
..+++.++++|+++..++.+-..+-+|+.+.+.
T Consensus 251 ~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~ 283 (293)
T COG2962 251 MFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI 283 (293)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888777766643
No 66
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.84 E-value=0.026 Score=46.34 Aligned_cols=65 Identities=9% Similarity=0.020 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhee
Q 024733 80 ALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVII 144 (263)
Q Consensus 80 ~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l 144 (263)
...+..+....+..+.+++.+.....+...+.++++.+++.++++|+++..++.|..+++.|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 33455667777899999999999999999999999999999999999999999999999998865
No 67
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.75 E-value=0.078 Score=40.26 Aligned_cols=116 Identities=12% Similarity=0.110 Sum_probs=82.0
Q ss_pred HHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHH
Q 024733 25 LLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFN 104 (263)
Q Consensus 25 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~ 104 (263)
..|-.+-+..+ .|..-+++-+..+.+.+.++....+..+.+.. ++.+|+.+. .|++-.....+...+...+.++..
T Consensus 18 ~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~-~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~ 93 (138)
T PF04657_consen 18 AFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLASL-SSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALT 93 (138)
T ss_pred HHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccchh-ccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHH
Confidence 45555555533 38888899999998877766555443322222 233455444 678888888888999999888777
Q ss_pred HHH-hhhHHHHHHHHHHH----HhhcccChhhHHHHhhhhhhhee
Q 024733 105 QAV-GATTPFFTAVFAYL----MTLKREAWLTYVTLIPVVTGVII 144 (263)
Q Consensus 105 ~vi-~~~~pi~~~i~~~~----~~~~~~~~~~~~~~~l~~~Gv~l 144 (263)
..+ ..-+-+..+++|.+ .-|++.+++|++++.+.++|+.+
T Consensus 94 ~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 94 TILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 766 45567778888885 34678999999999999999853
No 68
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.59 E-value=0.46 Score=41.74 Aligned_cols=162 Identities=13% Similarity=0.105 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHH---hhcCCcccchhhHHHHHHHHH
Q 024733 6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWM---KMVPMQTIRSRLQFLKISALS 82 (263)
Q Consensus 6 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 82 (263)
....+..+..=.+++.+...-.|. .++.+++ -... ...++++++.....-.. ...+.-+..+...+...+..|
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE-~~W~--v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G 80 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-VKKWSWE-TMWS--VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG 80 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-cCCCchh-HHHH--HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence 445566677777888888888888 5543333 2222 33334444333111111 111100101223445555667
Q ss_pred HHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhccc-------ChhhHHHHhhhhhhheeeec----cCC
Q 024733 83 FVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKRE-------AWLTYVTLIPVVTGVIIASG----GEP 150 (263)
Q Consensus 83 ~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~-------~~~~~~~~~l~~~Gv~l~~~----~~~ 150 (263)
++.+.+......+.++..++...-+ ..++-+...++..++++|=. .....++++++++|+++... .|.
T Consensus 81 ~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~ 160 (345)
T PRK13499 81 ALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER 160 (345)
T ss_pred HHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence 8888888899999999998887766 55667778888888887532 23467888899999999876 432
Q ss_pred --------cc-hHHHHHHHHHHHHHHHHHH
Q 024733 151 --------SF-HLFGFLMCIAATAARALKS 171 (263)
Q Consensus 151 --------~~-~~~G~~~~l~a~~~~a~~~ 171 (263)
+. ..+|+.+++++.+.++.|.
T Consensus 161 ~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 161 KMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred ccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 12 2589999999999999998
No 69
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.24 E-value=0.014 Score=42.56 Aligned_cols=70 Identities=16% Similarity=0.125 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheee
Q 024733 75 FLKISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~ 145 (263)
++..+|.. .+-.+...+++.+...+.|.+.-+ +++.=++|++.++++.+|..++++++|+.++++|+.+.
T Consensus 42 ~~y~ipf~-lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFL-LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 44455433 344455566777888888888877 69999999999999999999999999999999999764
No 70
>COG2510 Predicted membrane protein [Function unknown]
Probab=96.21 E-value=0.088 Score=39.02 Aligned_cols=87 Identities=15% Similarity=0.149 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHH
Q 024733 157 FLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSA 236 (263)
Q Consensus 157 ~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 236 (263)
.++++++++++++..+..|--. ++.||...+..-+.....++....+....++.. ...+...+.+++++|+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl----~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-----~~~~~k~~lflilSGl 75 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGL----EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-----GEIGPKSWLFLILSGL 75 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----cccCccHHHHHHHHHHHHHHHHHHHhcCceecc-----cccCcceehhhhHHHH
Confidence 6789999999999999999977 578888888888888888888877554433321 1345567788888998
Q ss_pred HHHHHHHHHHHHHhcc
Q 024733 237 LAYFVNLTNFLVTKHT 252 (263)
Q Consensus 237 ~~~~~~~~~~~~~~~~ 252 (263)
.+-......|..+++=
T Consensus 76 a~glswl~Yf~ALk~G 91 (140)
T COG2510 76 AGGLSWLLYFRALKKG 91 (140)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 8888888888887753
No 71
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.21 E-value=0.093 Score=44.31 Aligned_cols=127 Identities=9% Similarity=-0.011 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHH
Q 024733 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFC 86 (263)
Q Consensus 7 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (263)
.|.+...+.-.+.-..+....|.. +.+ |.....=|.+ +.++.-++..... +++..+|+.++ -...|+.++
T Consensus 137 ~kgi~~Ll~stigy~~Y~~~~~~~----~~~-~~~~~lPqai-Gm~i~a~i~~~~~---~~~~~~k~~~~-nil~G~~w~ 206 (269)
T PF06800_consen 137 KKGILALLISTIGYWIYSVIPKAF----HVS-GWSAFLPQAI-GMLIGAFIFNLFS---KKPFFEKKSWK-NILTGLIWG 206 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhc----CCC-hhHhHHHHHH-HHHHHHHHHhhcc---cccccccchHH-hhHHHHHHH
Confidence 344444444444444555555652 244 6655555533 3222222222211 11112334444 456789999
Q ss_pred HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHH----HHhhhhhhhe
Q 024733 87 ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYV----TLIPVVTGVI 143 (263)
Q Consensus 87 ~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~----~~~l~~~Gv~ 143 (263)
.+..+...|.+.+.++.+-.+..+.++...+.+.+++||+-+++++. +++++++|..
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999998888664 4444444543
No 72
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.08 E-value=0.042 Score=47.04 Aligned_cols=66 Identities=15% Similarity=0.213 Sum_probs=60.7
Q ss_pred HHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeec
Q 024733 82 SFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 82 ~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~ 147 (263)
-+.+.++-..++.|+.+.|.+..+-+.++..+..++++..++|||.+....+|..++++|..+++.
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 345568888999999999999999999999999999999999999999999999999999988764
No 73
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.89 E-value=0.018 Score=49.77 Aligned_cols=141 Identities=13% Similarity=0.066 Sum_probs=96.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhh--hCCCCchHHHHHHHHHHHHHHHH-HHHHHHhhcCC---cccchhhHHHHH
Q 024733 5 SKLFTFGLVAAWYSSNIGVLLLNKYLLS--NYGFRYPIFLTMCHMTACSLLSY-IAIAWMKMVPM---QTIRSRLQFLKI 78 (263)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~--~~~f~~p~~l~~~r~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~ 78 (263)
-.+.....++.+......=.+..|.++. +++.+ +..+...+.-++...+. ++....+.... ...++.-.....
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL 238 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH
Confidence 4566677777888888888888888884 55677 77777777666665555 43322111111 100111112222
Q ss_pred HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
...+.+....+...+..+..+++=+.++.....=+.+.+.++++++|+.|..+..|..+.++|+.+..
T Consensus 239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 22334444455667778889999999999999989999999999999999999999999999998764
No 74
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.33 E-value=0.77 Score=35.22 Aligned_cols=118 Identities=12% Similarity=0.062 Sum_probs=77.3
Q ss_pred HHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhH-
Q 024733 25 LLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSF- 103 (263)
Q Consensus 25 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~- 103 (263)
-.|-.+-+. .+.|..-.+.-+..+.+.+.++...+++++......+..|+.+.. |.+.+...+.+......+.++.
T Consensus 22 ~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~G-G~lGa~~vt~s~~l~p~lGa~~t 98 (150)
T COG3238 22 AINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIG-GLLGAIFVTSSILLAPRLGAATT 98 (150)
T ss_pred HHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHc-cchhhhhhhhhHHhccchhHHHH
Confidence 455566655 445888888889888777766655544444333223445555543 5655666666666666655444
Q ss_pred HHHHhhhHHHHHHHHHHHHh----hcccChhhHHHHhhhhhhheee
Q 024733 104 NQAVGATTPFFTAVFAYLMT----LKREAWLTYVTLIPVVTGVIIA 145 (263)
Q Consensus 104 ~~vi~~~~pi~~~i~~~~~~----~~~~~~~~~~~~~l~~~Gv~l~ 145 (263)
..+..+-+-+..+++|.+=. +++++..+++++++..+|+.+.
T Consensus 99 ~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 99 IALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 44556777788888886543 3679999999999999996554
No 75
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=95.22 E-value=0.57 Score=39.19 Aligned_cols=49 Identities=8% Similarity=0.105 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHH
Q 024733 74 QFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLM 122 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~ 122 (263)
+|...+..+++..+.+.+.++++++.+++..+...++.|++..+++.+.
T Consensus 207 ~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 207 IWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 4555666677767889999999999999999999999999999998764
No 76
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=94.84 E-value=0.039 Score=40.28 Aligned_cols=84 Identities=25% Similarity=0.289 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHHHH-HHHHHH
Q 024733 165 AARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSAL-AYFVNL 243 (263)
Q Consensus 165 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~ 243 (263)
++||.+.+..|+.. ++.|+...+.+....+.+ +++.....+.++.. +.+...+......+.+ ....+.
T Consensus 1 ~~~a~~~~~~k~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL----KKISPLSITFWRFLIAGI-LLILLLILGRKPFK------NLSPRQWLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHh----ccCCHHHHHHHHHHHHHH-HHHHHHhhcccccc------CCChhhhhhhhHhhccceehHHH
Confidence 36788999999988 459999999999999998 77766555544311 1222222333333333 355555
Q ss_pred HHHHHHhccCceeEEe
Q 024733 244 TNFLVTKHTSALTLQV 259 (263)
Q Consensus 244 ~~~~~~~~~s~~t~sv 259 (263)
..+...++.++...+.
T Consensus 70 ~~~~a~~~~~~~~~~~ 85 (126)
T PF00892_consen 70 LYFYALKYISASIVSI 85 (126)
T ss_pred HHHHHHHhcchhHHHH
Confidence 5667777777665543
No 77
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=93.75 E-value=2.5 Score=35.31 Aligned_cols=129 Identities=11% Similarity=0.004 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHH-HhhcCCcccc--hhhHHHHHHHHH
Q 024733 6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW-MKMVPMQTIR--SRLQFLKISALS 82 (263)
Q Consensus 6 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~ 82 (263)
....+..++.-.++|....++++.++++.+ .|...--.|+-+.+++..++... .+..+.++.. ..-.+. .....
T Consensus 112 ~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~-~~~~i 188 (244)
T PF04142_consen 112 PLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWW-VWIVI 188 (244)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchH-HHHHH
Confidence 345566677777888888889999998855 36666667776665554444332 2221111111 111112 22233
Q ss_pred HHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhh
Q 024733 83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIP 137 (263)
Q Consensus 83 ~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l 137 (263)
+..+.+-.....-++|.+.=.=....+...+.+.++++.+++.+++..-.+|..+
T Consensus 189 ~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 189 FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 4456666666778889888788888899999999999999999999988877654
No 78
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.44 E-value=1.6 Score=37.37 Aligned_cols=139 Identities=8% Similarity=0.041 Sum_probs=93.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hcCCccc--chhhHHHHHHHH
Q 024733 5 SKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMK-MVPMQTI--RSRLQFLKISAL 81 (263)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~ 81 (263)
.....++.+..+.+...-.+-..+.+++.++.. +..+.+.-=++..+.-.......+ ..+.... ..++.++..+..
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence 355667778888898998888899999876665 444333222222222221111111 0110000 124667888888
Q ss_pred HHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhee
Q 024733 82 SFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVII 144 (263)
Q Consensus 82 ~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l 144 (263)
+.+.+.+..+.++-++.-.+=..+.+.-+.=++...++.+.++.+.+..+|.+..+++.|+..
T Consensus 248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 999988877777666665556677778888899999999999999999999999988877643
No 79
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=92.71 E-value=0.095 Score=43.85 Aligned_cols=70 Identities=13% Similarity=0.055 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhh
Q 024733 72 RLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTG 141 (263)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~G 141 (263)
+++|..+.-+|++..++..+...++|.=-++-.++.+++..++..+.+.+++++-||..+|+|+++++..
T Consensus 250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS 319 (346)
T KOG4510|consen 250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSS 319 (346)
T ss_pred ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehh
Confidence 4455556667887777888888899999999999999999999999999999999999999988765433
No 80
>PRK13499 rhamnose-proton symporter; Provisional
Probab=92.46 E-value=3.8 Score=36.07 Aligned_cols=68 Identities=4% Similarity=0.076 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhhhhhccccchhHHHH---Hh-hhHHHHHHHHHHHHhhcccC------hhhHHHHhhhhhhheeeec
Q 024733 79 SALSFVFCISVVFGNVSLRFLPVSFNQA---VG-ATTPFFTAVFAYLMTLKREA------WLTYVTLIPVVTGVIIASG 147 (263)
Q Consensus 79 ~~~~~~~~~~~~~~~~sl~~~~~~~~~v---i~-~~~pi~~~i~~~~~~~~~~~------~~~~~~~~l~~~Gv~l~~~ 147 (263)
...|+.......++..|-...+.....+ +. ++..++..+.+. ++||+=+ +..++++++.++|..+...
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 4456666777777777666664443333 55 666677777777 5888655 4456777777777766543
No 81
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.37 E-value=1.2 Score=39.26 Aligned_cols=128 Identities=13% Similarity=0.052 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhhC--CCCchHHHHHHHHHHHHHHHHHHHHHH--hhcCCcccchhhHHHHHHHHHHH-HHHHHHhhhhhc
Q 024733 22 GVLLLNKYLLSNY--GFRYPIFLTMCHMTACSLLSYIAIAWM--KMVPMQTIRSRLQFLKISALSFV-FCISVVFGNVSL 96 (263)
Q Consensus 22 ~~~~~nK~~l~~~--~f~~p~~l~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl 96 (263)
.+...-|.=.+++ +.+-|....++.. ++.++++...... -+.++-+.|+..+.-.++..++. ..++=.+..+|.
T Consensus 261 vY~vllk~~~~~eg~rvdi~lffGfvGL-fnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~ 339 (416)
T KOG2765|consen 261 VYTVLLKRKIGDEGERVDIQLFFGFVGL-FNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAV 339 (416)
T ss_pred HHHHHHHhhcccccccccHHHHHHHHHH-HHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHH
Confidence 4445556665554 4665555554442 3444444222211 12344444554444444444433 346667888899
Q ss_pred cccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCC
Q 024733 97 RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP 150 (263)
Q Consensus 97 ~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~ 150 (263)
-.+++-.+++-.+.+.+..++.+.++.++++|+..++|...+++|-.++...+.
T Consensus 340 ~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 340 LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 999999999999999999999999999999999999999999999988876553
No 82
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=91.50 E-value=3.8 Score=33.64 Aligned_cols=122 Identities=9% Similarity=0.007 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHH-hhcCC---cccchhhHHHHHHHHHHHHHHHHHhh
Q 024733 17 YSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWM-KMVPM---QTIRSRLQFLKISALSFVFCISVVFG 92 (263)
Q Consensus 17 ~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (263)
.+.+...++..|...+--+|. -..-.+..=+.+..++..+.... ++.+. +.. +.+.....++-|++-.+...+.
T Consensus 164 clssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl-~~d~l~am~ISgl~svgiSy~s 241 (309)
T COG5070 164 CLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNL-SVDSLMAMFISGLCSVGISYCS 241 (309)
T ss_pred hHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCC-ChHHHHHHHHHHHHHhhhhhcc
Confidence 355666667777766643344 44444555555544444333332 22221 111 2233444555566666777889
Q ss_pred hhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhh
Q 024733 93 NVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVT 140 (263)
Q Consensus 93 ~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~ 140 (263)
-|.++-++...+.+..++.-...++.+.++++|+.++.++.+++++..
T Consensus 242 aWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfl 289 (309)
T COG5070 242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFL 289 (309)
T ss_pred ceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888888776543
No 83
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=89.97 E-value=3.1 Score=31.49 Aligned_cols=91 Identities=22% Similarity=0.314 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCC-CHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHHHH
Q 024733 157 FLMCIAATAARALKSVLQGILLSSEGEKL-NSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS 235 (263)
Q Consensus 157 ~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 235 (263)
.++++.+...-+.+..++.++. ++. ||+.-.......+.+.+..+....++++.. ...+.+ ++ ..++|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~----~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~---~~~~~p---~w-~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLG----KALGSPLVASFISFGVGFILLLIILLITGRPSLA---SLSSVP---WW-AYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHhCccHHHHHHHHHHHHHHHHHHHHHhcccccc---hhccCC---hH-HhccH
Confidence 5678888899999998888887 345 499999999999999988887665544211 111111 12 33388
Q ss_pred HHHHHHHHHHHHHHhccCceeEE
Q 024733 236 ALAYFVNLTNFLVTKHTSALTLQ 258 (263)
Q Consensus 236 ~~~~~~~~~~~~~~~~~s~~t~s 258 (263)
+++..+..+....+++.++....
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~ 94 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTT 94 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHH
Confidence 88888888888888988876543
No 84
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.84 E-value=2.3 Score=36.65 Aligned_cols=135 Identities=14% Similarity=0.049 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcC-----CcccchhhHHHHHHHHHHH
Q 024733 10 FGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVP-----MQTIRSRLQFLKISALSFV 84 (263)
Q Consensus 10 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 84 (263)
..+.....+.........|+-.+..+++ -+.+.+..-++....+.+.....+..+ .+.... ......+..+..
T Consensus 159 Y~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~-~~~~~~~~lScv 236 (314)
T KOG1444|consen 159 YSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSD-SSVLVVMLLSCV 236 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccc-hhHHHHHHHHHH
Confidence 4455566667777777788877754444 344444555555444444333332111 000011 112223333443
Q ss_pred HH-HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 85 FC-ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 85 ~~-~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
.+ +-..+..+..+..|+...++.....-..+.+.+.++++++.++...+|+.+.+.|-.+..
T Consensus 237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 33 444667777778888887777755566666666666677788888888877777766654
No 85
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=86.98 E-value=1.4 Score=36.34 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhhee
Q 024733 74 QFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVII 144 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l 144 (263)
.++.+...++..+++.++.+.-..+-++-.-+++..+.-+|+.+.+.++++..++.++|++..+++.|...
T Consensus 240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 45566677888888888887777776666667777788899999999999999999999999999887754
No 86
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=79.65 E-value=23 Score=30.28 Aligned_cols=132 Identities=14% Similarity=0.121 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCc------ccchhhHHHH--------
Q 024733 12 LVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQ------TIRSRLQFLK-------- 77 (263)
Q Consensus 12 ~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-------- 77 (263)
.+++=.+..+.++.-.|++-+ .+.+ |.....++.+++.+.+.++.......+.. +....+++..
T Consensus 181 IiiaqiivaiQ~v~Eek~l~~-~nV~-pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~ 258 (372)
T KOG3912|consen 181 IIIAQIIVAIQMVCEEKQLKK-SNVA-PLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQES 258 (372)
T ss_pred HHHHHHHHHHHHHHHHhhhhh-ccCC-HHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCC
Confidence 445556667777766666654 3578 99999999999954433332221111111 0000111111
Q ss_pred --HHHHHHHHHHHHHhhhhh----ccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheee
Q 024733 78 --ISALSFVFCISVVFGNVS----LRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (263)
Q Consensus 78 --~~~~~~~~~~~~~~~~~s----l~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~ 145 (263)
.......+..+..+.|.+ -++.++.+-.++-++.....-+++.....|+.+..++.|.++...|+.+.
T Consensus 259 p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY 332 (372)
T KOG3912|consen 259 PSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY 332 (372)
T ss_pred chhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122223344444444443 35678888888888888999999999999999999999999999998776
No 87
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=79.35 E-value=2.2 Score=35.47 Aligned_cols=127 Identities=14% Similarity=0.121 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhcccChhh----HHHHhhhhhhheeeecc
Q 024733 74 QFLKISALSFVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLKREAWLT----YVTLIPVVTGVIIASGG 148 (263)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~~~~~~~----~~~~~l~~~Gv~l~~~~ 148 (263)
.+..-+..|++-+++......|.++..++.+.-+ ...+-+-+-+++.+.++|=.+..+ .+++++.++|+.+.+.+
T Consensus 58 ~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~ 137 (288)
T COG4975 58 IFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQ 137 (288)
T ss_pred hHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeee
Confidence 3444555677778888888999999988877655 344566777888999999666554 45788899999999887
Q ss_pred CCc----c---h-HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 024733 149 EPS----F---H-LFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPAT 206 (263)
Q Consensus 149 ~~~----~---~-~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 206 (263)
|.+ . | -+|....+.+.+.|-.|.+..|.. +.|.+....-|+....+.-+...
T Consensus 138 ~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f------~v~g~saiLPqAiGMv~~ali~~ 197 (288)
T COG4975 138 DRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF------DVDGLSAILPQAIGMVIGALILG 197 (288)
T ss_pred ccccccccChHhhhhheeeeeeeccceeeeEeeeccc------cccchhhhhHHHHHHHHHHHHHh
Confidence 631 1 1 368888888999999998877763 36666666655544444444443
No 88
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=77.67 E-value=8.8 Score=29.49 Aligned_cols=96 Identities=21% Similarity=0.161 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccccchHHHHHHHH
Q 024733 154 LFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLF 233 (263)
Q Consensus 154 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 233 (263)
++..+.++.+..+...+.-.+.|+. +. .-+|..-.......+.+.+..+....++.+...... + ..++ ..+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~--~~-~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~--~---~pwW-~~~ 74 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLA--RY-LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVA--S---APWW-AWI 74 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHH--HH-cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhcc--C---CchH-HHH
Confidence 4567888889999999998888887 22 226888888888888888877776655444322111 1 1112 334
Q ss_pred HHHHHHHHHHHHHHHHhccCceeEE
Q 024733 234 NSALAYFVNLTNFLVTKHTSALTLQ 258 (263)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~s~~t~s 258 (263)
.|.++..+-.+......+.++.++.
T Consensus 75 GG~lGa~~vt~s~~l~p~lGa~~t~ 99 (150)
T COG3238 75 GGLLGAIFVTSSILLAPRLGAATTI 99 (150)
T ss_pred ccchhhhhhhhhHHhccchhHHHHH
Confidence 5677777777777777777776654
No 89
>PRK02237 hypothetical protein; Provisional
Probab=73.14 E-value=32 Score=24.78 Aligned_cols=45 Identities=9% Similarity=0.085 Sum_probs=35.6
Q ss_pred HHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeecc
Q 024733 104 NQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG 148 (263)
Q Consensus 104 ~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 148 (263)
++.-.........+..+.+-|+||++..+++..++++|+.++...
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 333444556666778888889999999999999999999887554
No 90
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=69.35 E-value=6.3 Score=28.26 Aligned_cols=43 Identities=16% Similarity=0.170 Sum_probs=35.1
Q ss_pred HHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeecc
Q 024733 106 AVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG 148 (263)
Q Consensus 106 vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 148 (263)
.-.........+..+.+-|+||++..+++..++++|+.++...
T Consensus 62 AYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 62 AYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3344556667778888889999999999999999999887654
No 91
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=62.96 E-value=2.4 Score=35.86 Aligned_cols=76 Identities=9% Similarity=0.032 Sum_probs=0.0
Q ss_pred HHHhhcc-cChhhHHHHhhhhhhheeeeccCCc--chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHH
Q 024733 120 YLMTLKR-EAWLTYVTLIPVVTGVIIASGGEPS--FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAP 196 (263)
Q Consensus 120 ~~~~~~~-~~~~~~~~~~l~~~Gv~l~~~~~~~--~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~ 196 (263)
..++||| +-+...++++++++-..+......+ .-+.|+++.++....--.-..|.. ++ +++.-+-++++.+...
T Consensus 69 ImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym~-lL--r~~GAs~WtiLaFcLA 145 (381)
T PF05297_consen 69 IMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYMW-LL--RELGASFWTILAFCLA 145 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHhhhHHHHHHHHHHH
Confidence 3445555 6666777777766655555444322 224565544444333222233322 44 4455677777776654
Q ss_pred HH
Q 024733 197 IA 198 (263)
Q Consensus 197 ~~ 198 (263)
+.
T Consensus 146 F~ 147 (381)
T PF05297_consen 146 FL 147 (381)
T ss_dssp --
T ss_pred HH
Confidence 43
No 92
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=61.40 E-value=15 Score=26.25 Aligned_cols=41 Identities=10% Similarity=0.101 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC
Q 024733 109 ATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE 149 (263)
Q Consensus 109 ~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 149 (263)
....+...+..++.-|.+|++..+++..+.++|+.++..++
T Consensus 66 GvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 66 GVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred chHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 34455666677777899999999999999999998876543
No 93
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=58.44 E-value=5.4 Score=33.29 Aligned_cols=65 Identities=12% Similarity=0.178 Sum_probs=47.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHh
Q 024733 71 SRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLI 136 (263)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~ 136 (263)
+|..++..+ .|+..+.+......|-+...+++.--+..+..+...+-+.+++|||-|++++....
T Consensus 206 ~K~t~~nii-~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~ 270 (288)
T COG4975 206 NKYTWLNII-PGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVI 270 (288)
T ss_pred HHHHHHHHh-hHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhh
Confidence 344455444 47777777777777777777777777777788888888999999999998876543
No 94
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=56.65 E-value=13 Score=26.73 Aligned_cols=70 Identities=16% Similarity=0.179 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccchhHHH-HHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheee
Q 024733 75 FLKISALSFVFCISVVFGNVSLRFLPVSFNQ-AVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (263)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~-vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~ 145 (263)
|..+.|..+-. .+..++++-++..+.+.+. +-+++.-.|+++.+..+..|.+.++.+.+..++++|+.+.
T Consensus 53 w~Y~iPFllNq-cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLLNQ-CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHH-hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 44444544333 3444555556666655544 3467788999999999988889999999999999998653
No 95
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=54.37 E-value=1.5e+02 Score=26.08 Aligned_cols=165 Identities=12% Similarity=0.117 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCc----ccchhhHHHHHHHHH
Q 024733 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQ----TIRSRLQFLKISALS 82 (263)
Q Consensus 7 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 82 (263)
...+.+...=.+++.+..+=.|.+=+ ...+ ...+ .|.++++++.-.+..+.. .|.- +..+.+........+
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk~-WsWE-s~Wl--v~gi~swli~P~~~a~l~-ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVKG-WSWE-SYWL--VQGIFSWLIVPWLWALLA-IPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcCC-ccHH-HHHH--HHHHHHHHHHHHHHHHHh-CCcHHHHHHhCChhHHHHHHHHH
Confidence 33444444445666666665565532 1223 2333 477777766554433322 1110 001223444444556
Q ss_pred HHHHHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhh-------cccChhhHHHHhhhhhhheeeec----cC-
Q 024733 83 FVFCISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTL-------KREAWLTYVTLIPVVTGVIIASG----GE- 149 (263)
Q Consensus 83 ~~~~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~-------~~~~~~~~~~~~l~~~Gv~l~~~----~~- 149 (263)
++-.++-..+-.+.+|+.++..+-+ ..+.-.+-.++-.++.+ ++-....++++++.++|+++... .|
T Consensus 81 ~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~ 160 (344)
T PF06379_consen 81 VLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK 160 (344)
T ss_pred HHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence 6665555666667777766665433 22333333333333322 23345788999999999988742 12
Q ss_pred ------Ccch-HHHHHHHHHHHHHHHHHHHHHHH
Q 024733 150 ------PSFH-LFGFLMCIAATAARALKSVLQGI 176 (263)
Q Consensus 150 ------~~~~-~~G~~~~l~a~~~~a~~~v~~k~ 176 (263)
.++| .+|.+.++.+.+..|..+.=.+.
T Consensus 161 ~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~a 194 (344)
T PF06379_consen 161 ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDA 194 (344)
T ss_pred hhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHc
Confidence 1234 37999999999999888765543
No 96
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=43.25 E-value=2e+02 Score=24.71 Aligned_cols=53 Identities=13% Similarity=0.081 Sum_probs=43.0
Q ss_pred cchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccCCc
Q 024733 99 LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPS 151 (263)
Q Consensus 99 ~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~ 151 (263)
-.+..++.+....-..+.+++++++.++.|....-+.++++.|+.+-..++.+
T Consensus 284 fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 284 FGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred hchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 35556666666667788999999999999999999999999999987766643
No 97
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=35.13 E-value=3.4e+02 Score=24.44 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHhccCce
Q 024733 235 SALAYFVNLTNFLVTKHTSAL 255 (263)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~s~~ 255 (263)
...++...+..+..++++.++
T Consensus 358 ~~~~~~~s~i~~~~l~~~~~L 378 (399)
T PF00909_consen 358 LAWSFVVSYIIFKILKKFGGL 378 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHT-S
T ss_pred HHHHHHHHHHHHHHHHhcccc
Confidence 344445555556777776653
No 98
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=31.90 E-value=3.6e+02 Score=23.85 Aligned_cols=139 Identities=5% Similarity=-0.015 Sum_probs=81.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHH-HhhcCC--cccchhhHHHHHHHH
Q 024733 5 SKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAW-MKMVPM--QTIRSRLQFLKISAL 81 (263)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~ 81 (263)
+.+.....+..-+..|+-..++.+.++++- +-+..+-=+|+-+-+++.-....+ .+..+. ..+-..-.+. ....
T Consensus 180 n~~~G~~avl~~c~~SgfAgvYfEkiLK~s--~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~-vw~v 256 (345)
T KOG2234|consen 180 NPFLGLVAVLVACFLSGFAGVYFEKILKGS--NVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSI-VWLV 256 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHH-HHHH
Confidence 345556666777777777777888888763 336777777777666554444333 222211 1111111111 1122
Q ss_pred HHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeee
Q 024733 82 SFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (263)
Q Consensus 82 ~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~ 146 (263)
-+.++.+-.+...=.+|.+-=.-....+...+++.+.+..+++.++|..=.+|+.+++..+.+..
T Consensus 257 Vl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~ 321 (345)
T KOG2234|consen 257 VLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS 321 (345)
T ss_pred HHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence 33444443444444555554444455566788888888888888888888877777777666654
No 99
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=31.56 E-value=3.3e+02 Score=23.25 Aligned_cols=118 Identities=13% Similarity=0.144 Sum_probs=69.3
Q ss_pred HHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCcccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHH
Q 024733 26 LNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQ 105 (263)
Q Consensus 26 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~ 105 (263)
..+++.++ .| -..+...-.++++++..+= ....+.+...+.|......++...++..+-+.+.-.-++..++.++.
T Consensus 184 ~EEflvkn--~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~n 259 (336)
T KOG2766|consen 184 SEEFLVKN--AD-RVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLRFALTMFLLYSLAPILIKTNSATMFN 259 (336)
T ss_pred cHHHHHhc--Cc-HHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHHHHHHHHHHHHhhHHheecCCceEEE
Confidence 45666665 44 3444444445666655442 33332333333332223333333333333333444456667777777
Q ss_pred HHhhhHHHHHHHHHHHHhhcccChhhHHHHhhhhhhheeeeccC
Q 024733 106 AVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE 149 (263)
Q Consensus 106 vi~~~~pi~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 149 (263)
+-.-+.-.|..++ ..++-+..+.-.++......|..+....|
T Consensus 260 lslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re 301 (336)
T KOG2766|consen 260 LSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE 301 (336)
T ss_pred hhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence 7777777887777 56677799999999999999999986544
No 100
>PF03729 DUF308: Short repeat of unknown function (DUF308); InterPro: IPR005325 This represents a group of short repeats that occurs in a limited number of membrane proteins. It may divide further in short repeats of around 7-10 residues of the pattern G-#-X(2)-#(2)-X (#=hydrophobic).
Probab=30.50 E-value=1.4e+02 Score=18.74 Aligned_cols=29 Identities=14% Similarity=0.361 Sum_probs=18.8
Q ss_pred HHHhhhhhhheeeeccCCcchHHHHHHHH
Q 024733 133 VTLIPVVTGVIIASGGEPSFHLFGFLMCI 161 (263)
Q Consensus 133 ~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l 161 (263)
.|++....|+.+...++...+......+.
T Consensus 2 ~Gil~iv~Gi~~l~~p~~~~~~~~~i~g~ 30 (72)
T PF03729_consen 2 SGILFIVLGILLLFNPDASLAALAIILGI 30 (72)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 46777788888887777665544444333
No 101
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=29.17 E-value=1.1e+02 Score=23.98 Aligned_cols=61 Identities=15% Similarity=0.098 Sum_probs=37.6
Q ss_pred HHHHHhhcccChhhHHHHhh-------hhhhheeeeccCCcchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024733 118 FAYLMTLKREAWLTYVTLIP-------VVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILL 178 (263)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~l-------~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~ 178 (263)
.+.++.|..|+..+.+|+.+ .+.|+.+....+...-......++.+++.+++-.++.....
T Consensus 88 ~Em~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~~~~f~qsv~~gf~a~lGfslvmvlfA~iR 155 (193)
T COG4657 88 TEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNINEGHNFLQSVVYGFGAALGFSLVMVLFAAIR 155 (193)
T ss_pred HHHHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhhhhhHHHHHHHHhhhHhhHHHHHHHHHHHH
Confidence 34444555566666666553 34566666555544334677778888888888777765544
No 102
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=27.05 E-value=3.4e+02 Score=21.88 Aligned_cols=58 Identities=14% Similarity=0.168 Sum_probs=32.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhhh----CCCCchHHHHHHHHHHHHHHHHHHHHH
Q 024733 3 SSSKLFTFGLVAAWYSSNIGVLLLNKYLLSN----YGFRYPIFLTMCHMTACSLLSYIAIAW 60 (263)
Q Consensus 3 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~----~~f~~p~~l~~~r~~~~~~~~~~~~~~ 60 (263)
.+++.+...+...|..........--...+. .+...+......|...+.+++..-.+.
T Consensus 25 ~r~~~~~~af~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lGv~ll~~a~~~ 86 (214)
T PF11139_consen 25 PRPRRNLLAFLAGWFLGYLAVGLVLLFGLDALPSGSSSAPSPVVGWLQLVLGVLLLLLAVRV 86 (214)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCccHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666777776555554444444432 111125677778888887665554443
No 103
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=26.80 E-value=3.7e+02 Score=22.23 Aligned_cols=77 Identities=5% Similarity=-0.069 Sum_probs=40.0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHH---HHHHHHHhhcccChhhHHHHhhhhhhhee
Q 024733 68 TIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFT---AVFAYLMTLKREAWLTYVTLIPVVTGVII 144 (263)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~vi~~~~pi~~---~i~~~~~~~~~~~~~~~~~~~l~~~Gv~l 144 (263)
+.+++..+....|.-+|++.-...........+.+..++-..+.-++. ...+.+..+.+.+.....+-.+.++|...
T Consensus 95 ~~s~~t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~Glyf 174 (224)
T PF09930_consen 95 DSSRRTFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLGLYF 174 (224)
T ss_pred CCcccchhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 334555666667776666544444334444444444444444443332 23334444455555566777766666643
No 104
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=23.58 E-value=1.7e+02 Score=18.14 Aligned_cols=43 Identities=26% Similarity=0.274 Sum_probs=31.6
Q ss_pred hHHHHhhhhhhheeeeccCCcchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024733 131 TYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILL 178 (263)
Q Consensus 131 ~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~ 178 (263)
..+|..+.++|+.+...+.. |....+++....|......|+.+
T Consensus 5 ~v~G~~lv~~Gii~~~lPGp-----G~l~i~~GL~iLa~ef~wArr~l 47 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPGP-----GLLVIFLGLAILATEFPWARRLL 47 (53)
T ss_pred hhHHHHHHHHHHHhhcCCCC-----cHHHHHHHHHHHHHhhHHHHHHH
Confidence 46778888889888765432 66677777777888877777766
No 105
>COG4420 Predicted membrane protein [Function unknown]
Probab=23.53 E-value=2.5e+02 Score=22.46 Aligned_cols=42 Identities=14% Similarity=-0.048 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHH
Q 024733 6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACS 51 (263)
Q Consensus 6 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~r~~~~~ 51 (263)
+|..++..+...+.|+..++..+..... .|||+.+ ++++++.
T Consensus 57 sw~fil~~~~~ll~Wi~lNl~~~~~~~w--DpyPFi~--LnLllS~ 98 (191)
T COG4420 57 SWAFILTFTLLLLLWIVLNLFLVPGLAW--DPYPFIL--LNLLLST 98 (191)
T ss_pred ChHHHHHHHHHHHHHHHHHHhhhcCCcC--CCccHHH--HHHHHHH
Confidence 4555555556666666766666666444 4566533 4444443
No 106
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=23.45 E-value=1.6e+02 Score=25.48 Aligned_cols=63 Identities=13% Similarity=0.144 Sum_probs=39.8
Q ss_pred HHHHHhhhhhccccchhHHHHH-hhhHHHHHHHHHHHHhhc--ccChhhH----HHHhhhhhhheeeecc
Q 024733 86 CISVVFGNVSLRFLPVSFNQAV-GATTPFFTAVFAYLMTLK--REAWLTY----VTLIPVVTGVIIASGG 148 (263)
Q Consensus 86 ~~~~~~~~~sl~~~~~~~~~vi-~~~~pi~~~i~~~~~~~~--~~~~~~~----~~~~l~~~Gv~l~~~~ 148 (263)
......-|.|++.-+.+...-+ .......+.+-+.++++| +.+..++ .|..+.+.|+.++...
T Consensus 224 ~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~ 293 (300)
T PF05653_consen 224 VLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSS 293 (300)
T ss_pred HHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeecc
Confidence 3566788888887665433322 333455677777888886 5666444 4566677888777543
No 107
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=21.67 E-value=4.3e+02 Score=21.25 Aligned_cols=20 Identities=10% Similarity=-0.096 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 024733 10 FGLVAAWYSSNIGVLLLNKY 29 (263)
Q Consensus 10 ~~~~~~~~~~s~~~~~~nK~ 29 (263)
+++..+..+.|....+++|-
T Consensus 102 Ll~lg~~aLlsgitaff~~n 121 (226)
T COG4858 102 LLFLGAMALLSGITAFFQKN 121 (226)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 34444566777778888876
No 108
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=20.80 E-value=4.8e+02 Score=22.79 Aligned_cols=41 Identities=5% Similarity=0.024 Sum_probs=28.1
Q ss_pred chhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 024733 214 VGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSA 254 (263)
Q Consensus 214 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~ 254 (263)
.++..+..+.++..+..-..+|++--+-|...-+.+...+-
T Consensus 58 ~~Fl~qL~Q~n~~sv~~A~aGGvvfnlgNillq~aia~aGm 98 (336)
T PF07168_consen 58 PNFLTQLSQANWPSVLFAMAGGVVFNLGNILLQAAIAFAGM 98 (336)
T ss_pred ccHHHHHhcCChHHHHHHHHhhHhhhhHHHHHHHHHHHhcc
Confidence 34555666667777777777888888888777666665543
Done!