Query 024737
Match_columns 263
No_of_seqs 159 out of 1259
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 13:34:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024737.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024737hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rg9_A Bifunctional dihydrofol 100.0 5.4E-47 1.8E-51 339.9 16.2 183 76-258 24-239 (240)
2 3tq8_A Dihydrofolate reductase 100.0 1.5E-45 5.3E-50 317.2 21.9 163 80-263 2-166 (178)
3 3nzb_X Dihydrofolate reductase 100.0 1.5E-46 5.2E-51 329.7 15.5 180 77-258 3-205 (206)
4 3ia4_A Dihydrofolate reductase 100.0 9.5E-46 3.2E-50 313.9 18.6 159 80-259 2-162 (162)
5 3s9u_A Dihydrofolate reductase 100.0 1.8E-45 6.1E-50 313.1 20.4 159 80-259 5-165 (165)
6 3dau_A Dihydrofolate reductase 100.0 2.5E-45 8.4E-50 310.7 18.0 157 80-258 1-159 (159)
7 3ix9_A Dihydrofolate reductase 100.0 8.5E-44 2.9E-48 309.2 21.3 166 76-260 20-188 (190)
8 1kmv_A DHFR, dihydrofolate red 100.0 6.3E-44 2.2E-48 307.4 20.3 177 79-258 2-185 (186)
9 3dfr_A Dihydrofolate reductase 100.0 3.6E-44 1.2E-48 303.9 18.4 159 82-258 2-161 (162)
10 2bl9_A Dihydrofolate reductase 100.0 3E-43 1E-47 315.2 15.7 174 80-258 26-238 (238)
11 3irm_A Bifunctional dihydrofol 100.0 7.3E-43 2.5E-47 341.5 18.4 184 76-259 18-234 (521)
12 3nrr_A Dihydrofolate reductase 100.0 9.5E-43 3.2E-47 340.3 18.5 179 74-260 8-193 (515)
13 2w3w_A Dihydrofolate reductase 100.0 5.8E-42 2E-46 291.1 18.8 162 78-258 3-167 (167)
14 1zdr_A Dihydrofolate reductase 100.0 2.9E-41 9.7E-46 285.3 21.3 158 81-258 2-161 (164)
15 2w9h_A DHFR, dihydrofolate red 100.0 2.6E-41 8.8E-46 284.5 18.3 156 80-259 2-159 (159)
16 3qg2_A Bifunctional dihydrofol 100.0 3.1E-42 1.1E-46 340.5 13.4 178 78-260 25-231 (608)
17 1vdr_A DHFR, dihydrofolate red 100.0 5.6E-41 1.9E-45 282.5 17.7 157 80-259 2-159 (162)
18 3hj3_A Chain A, crystal struct 100.0 2.5E-41 8.6E-46 330.7 17.8 173 78-257 4-177 (521)
19 1j3k_A Bifunctional dihydrofol 100.0 1.1E-41 3.6E-46 311.5 13.6 176 79-259 26-230 (280)
20 1df7_A DHFR, dihydrofolate red 100.0 7.8E-41 2.7E-45 282.3 17.8 154 81-258 2-159 (159)
21 1aoe_A DHFR, dihydrofolate red 100.0 1.3E-40 4.3E-45 288.3 16.6 173 78-258 3-192 (192)
22 3cse_A Dihydrofolate reductase 100.0 3.4E-40 1.1E-44 293.4 15.0 178 79-259 4-218 (227)
23 1juv_A DHFR, dihydrofolate red 100.0 1.1E-34 3.8E-39 251.9 10.2 131 81-228 2-162 (193)
24 1cz3_A Dihydrofolate reductase 100.0 1.2E-32 4.2E-37 232.1 17.6 162 79-260 1-166 (168)
25 3jtw_A Dihydrofolate reductase 100.0 2.1E-32 7.2E-37 233.4 15.9 162 78-257 3-177 (178)
26 3ky8_A Putative riboflavin bio 100.0 5.3E-30 1.8E-34 222.8 15.7 167 77-259 18-196 (197)
27 2xw7_A Dihydrofolate reductase 100.0 2.4E-29 8.3E-34 213.4 11.3 164 78-259 3-175 (178)
28 2gd9_A Hypothetical protein YY 99.9 4.9E-28 1.7E-32 206.9 11.5 165 76-258 6-188 (189)
29 3kgy_A Bifunctional deaminase- 99.9 3.2E-25 1.1E-29 197.7 16.1 169 75-258 17-231 (231)
30 2b3z_A Riboflavin biosynthesis 99.8 7.9E-19 2.7E-23 165.7 13.8 167 77-258 156-371 (373)
31 2azn_A HTP reductase, putative 99.7 5.2E-17 1.8E-21 141.7 18.1 165 78-258 3-218 (219)
32 2g6v_A Riboflavin biosynthesis 99.6 1.1E-14 3.7E-19 138.8 16.7 142 77-229 172-364 (402)
33 2hxv_A Diaminohydroxyphosphori 99.6 4.7E-14 1.6E-18 132.5 19.2 165 77-258 158-357 (360)
34 2p4g_A Hypothetical protein; p 99.6 2.1E-13 7.2E-18 123.0 19.7 169 78-259 33-262 (270)
35 3o4f_A Spermidine synthase; am 41.9 15 0.00051 33.1 2.9 43 186-228 83-129 (294)
No 1
>3rg9_A Bifunctional dihydrofolate reductase-thymidylate; oxidoreductase, oxidoreductase-oxidoreductase inhibitor complex; HET: NDP WRA; 2.00A {Trypanosoma brucei rhodesiense} PDB: 3qfx_A*
Probab=100.00 E-value=5.4e-47 Score=339.91 Aligned_cols=183 Identities=39% Similarity=0.675 Sum_probs=155.9
Q ss_pred CCCCcEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhC------CCCCCCCCEEEEcchhhhhccCCCCCCCCCcEE
Q 024737 76 RARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMS------TSDPGKRNAVVMGRKTWESISPLYRPLPGRLNV 149 (263)
Q Consensus 76 ~~~rkIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~------~~~~~~~~avIMGRkTyeslp~~~~plp~r~nI 149 (263)
..||+|++|+|+++||+||.+|+|||++|+||+||+++|++ ..+|++.++||||||||||+|..++|||+|.||
T Consensus 24 ~~mr~i~lIvA~s~ng~IG~~g~LPW~lp~Dm~~Fk~~T~g~p~~~~~~~~~~~naVIMGRKT~ESip~~~rPLp~R~nI 103 (240)
T 3rg9_A 24 PPLRPFSVVVASDEKGGIGDGGTIPWEIPEDMQYFRRVTTNLRGKNVKPSPSKRNAVVMGRKTWDSLPPKFRPLSNRLNV 103 (240)
T ss_dssp CCCCCEEEEEEEETTCEEESSSSCSCCCHHHHHHHHHHHHCCSSSSCCCBTTBEEEEEEEHHHHHHSCGGGSSCTTSEEE
T ss_pred CCCCeEEEEEEECCCCcEECCCCcCCCCHHHHHHHHHHHcCCcccccccccccCcEEEEehhHHhhhhhhccCCCCCeEE
Confidence 45999999999999999999999999999999999999997 355677799999999999998656899999999
Q ss_pred EEcCCCCCCC-----C--------CCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCC---CcCEEEE
Q 024737 150 VLTHSGSFNI-----A--------SLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAP---ECDAIHI 213 (263)
Q Consensus 150 VlSrt~~~~~-----~--------~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~---lvDel~L 213 (263)
||||+..... + ..+++.+++|+++|++.+++.....+.++||||||++||+++|+++ +||+++|
T Consensus 104 VlSr~~~~~~~~~~~~~~~~~~~~~~~~v~v~~sl~eal~~l~~~~~~~~~~~I~VIGGa~IY~~~L~~~~~~l~D~l~l 183 (240)
T 3rg9_A 104 VLSRSATKEQLLAGIPDPIKRAEAANDVVAVNGGLEDALRMLVSKEHTSSIETVFCIGGGTIYKQALCAPCVNVLQAIHR 183 (240)
T ss_dssp EECSSCCHHHHHTTCSSHHHHHHHGGGEEEESSCHHHHHHHTTSHHHHHHEEEEEECCCHHHHHHHTSTTGGGGEEEEEE
T ss_pred EEccCcccccccccccccccccccCCCCEEEECCHHHHHHHHhccccccCCCeEEEECCHHHHHHHHhcCccccCCEEEE
Confidence 9999974310 0 0246789999999999998630000147899999999999999988 9999999
Q ss_pred EEEC-CccCCceec--CCCCccC-----ceEeeeccC---ceeCcccEEEEEEEEc
Q 024737 214 TKIE-TSIECDTFI--PAIDLSL-----FQQRYSSQP---LVENNIQFSFVTYVRV 258 (263)
Q Consensus 214 T~I~-~~leGD~fF--P~~d~~~-----f~~~~~~~~---~~en~~~~~f~~Y~r~ 258 (263)
|+|+ ..++||+|| |++|.+. |+++..++. .++|++.|+|++|+|+
T Consensus 184 T~I~p~~~egDtfFp~P~~d~~~~~~~~w~~~~~~~~~~~~~~~~~~y~f~~y~r~ 239 (240)
T 3rg9_A 184 TVVRPASNSCSVFFDIPAAGTKTPEGLELVRESITDERVSTGAGGKKYQFEKLVPR 239 (240)
T ss_dssp EEEESCCSSCCEECCCCCTTCCCTTSCCEEEEEECCCEECSSTTCCEEEEEEEEEC
T ss_pred EEEcCCCcCcceecCCCCCChhhcccCceEEEEeeccccccCCCCCceEEEEEEeC
Confidence 9999 889999999 9999877 998874432 2458999999999997
No 2
>3tq8_A Dihydrofolate reductase; oxidoreductase-oxidoreductase inhib complex; HET: NDP TOP; 1.90A {Coxiella burnetii} SCOP: c.71.1.0 PDB: 3tq9_A* 3tqa_A* 3tqb_A*
Probab=100.00 E-value=1.5e-45 Score=317.23 Aligned_cols=163 Identities=33% Similarity=0.582 Sum_probs=145.2
Q ss_pred cEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCCC
Q 024737 80 PYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNI 159 (263)
Q Consensus 80 kIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~~ 159 (263)
+|++|+|+|+||+||++|+|||++|+|+++|+++|+ +++|||||||||++| +|||+|+|||+||++...
T Consensus 2 ~i~li~A~s~dg~IG~~g~lpW~lp~Dl~~Fk~~T~-------g~~vIMGRkTyesi~---~plp~R~niVlSr~~~~~- 70 (178)
T 3tq8_A 2 IITLIAAMDKNRLIGRNNELPWHLPADLAHFKSITL-------GKPIVMGRRTFDSIG---KPLPHRRNIVITQQKNLI- 70 (178)
T ss_dssp EEEEEEEEETTCEEEBTTBCSSCCHHHHHHHHHHHT-------TSEEEEEHHHHHHHC---SCCTTSEEEEECSCTTCC-
T ss_pred EEEEEEEECCCCcEECCCCcCCcCHHHHHHHHHhhc-------CCEEEEechHHhhhh---hccCCCeEEEEcCCCCcC-
Confidence 699999999999999999999999999999999998 499999999999998 699999999999997543
Q ss_pred CCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCCCCccCceEeee
Q 024737 160 ASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYS 239 (263)
Q Consensus 160 ~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~~~~ 239 (263)
.+++.+++|+++|++.+++ .++|||+||+++|+++|+ +||+++||+||..++||+|||+++.+.|+++..
T Consensus 71 --~~~v~v~~sl~eal~~l~~------~~~i~viGG~~iy~~~l~--l~Del~lT~i~~~~~Gd~~Fp~~~~~~w~l~~~ 140 (178)
T 3tq8_A 71 --IEGCDIFYSLDDALSALTK------EPEVIIIGGARIFKEALP--KADKMILTIINHSFEGDVYFPEWNDKEWKITSQ 140 (178)
T ss_dssp --CTTSEEESSHHHHHHHTTT------CSEEEEEECHHHHHHHGG--GCSEEEEEEESSCCCCSEECCCCCTTSEEEEEE
T ss_pred --CCCeEEECCHHHHHHHhhC------CCCEEEECCHHHHHHHHH--hCCEEEEEEccccccccCcCCCCChHHCEEEEE
Confidence 3678888999999999875 379999999999999994 999999999999999999999999889998765
Q ss_pred cc--CceeCcccEEEEEEEEcCCCCC
Q 024737 240 SQ--PLVENNIQFSFVTYVRVGNTSF 263 (263)
Q Consensus 240 ~~--~~~en~~~~~f~~Y~r~~~~~~ 263 (263)
+. ..++|+++|.|++|+|+.+.-|
T Consensus 141 ~~~~~~~~~~~~~~f~~y~r~~~~~~ 166 (178)
T 3tq8_A 141 IKHERDEKNPYPFQFLELRRLENLYF 166 (178)
T ss_dssp EEECCC--CCSCEEEEEEEECCCTTT
T ss_pred EeccccccCCccEEEEEEEECCcccc
Confidence 43 2456889999999999866543
No 3
>3nzb_X Dihydrofolate reductase; pneumocystius carinii DHFR inhibitor complexes, oxidoreducta oxidoreductase-oxidoreductase inhibitor complex; HET: D2N NAP; 1.45A {Pneumocystis carinii} SCOP: c.71.1.1 PDB: 1daj_A* 1cd2_A* 1e26_A* 1klk_A* 1ly3_A* 1ly4_A* 1s3y_A* 2cd2_A* 2fzh_A* 1dyr_A* 3cd2_A* 3nz6_X* 3nz9_X* 3nza_X* 2fzi_A* 3nzc_X* 3td8_A* 4cd2_A* 1vj3_A*
Probab=100.00 E-value=1.5e-46 Score=329.70 Aligned_cols=180 Identities=34% Similarity=0.629 Sum_probs=153.8
Q ss_pred CCCcEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCC---CCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcC
Q 024737 77 ARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMST---SDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTH 153 (263)
Q Consensus 77 ~~rkIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~---~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSr 153 (263)
+|++|++|+|+|+||+||.+|+|||++|+|++||+++|+++ .++++.++|||||||||++|..++|||+|+|||+||
T Consensus 3 ~~~~i~livA~s~dg~IG~~g~lpW~l~~D~~~F~~~t~~~~~~~~~~~~~~vIMGRkTyesi~~~~~Pl~~r~niVlSr 82 (206)
T 3nzb_X 3 QQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITR 82 (206)
T ss_dssp CCSCEEEEEEEETTCEEEBTTBCSSCCHHHHHHHHHHHHCCCTTGGGTEEEEEEEEHHHHHHSCGGGCSCTTSEEEEECS
T ss_pred CCCEEEEEEEECCCCcEeCCCCcCCCChhHHHHHHHHHccCccccccccCCEEEECchHHHhhhhcccCCCCCeEEEEcc
Confidence 48899999999999999999999999999999999999862 334556999999999999986458999999999999
Q ss_pred CCCCCCCCCCCeEEeCCHHHHHHHhcCCCCCC---CCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecC-CC
Q 024737 154 SGSFNIASLENVEICRSIHLALELLAEPPYCS---SIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIP-AI 229 (263)
Q Consensus 154 t~~~~~~~~~~v~v~~sieeai~~l~~~~~~~---~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP-~~ 229 (263)
++... ..+++.+++|+++|++.+++.+... ++++|||+||++||+++|++++||+++||+||..++||+||| ++
T Consensus 83 ~~~~~--~~~~~~v~~sl~eal~~l~~~~~~~~~~~~~~i~ViGG~~iy~~~L~~~l~Del~lT~i~~~~~gd~~FP~~~ 160 (206)
T 3nzb_X 83 NESLD--LGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKF 160 (206)
T ss_dssp SCCCC--CCSSCEEESSHHHHHHHHHHHSCSSSSSEEEEEEECCCHHHHHHHHHSTTEEEEEEEEECSCCCCSEECSSCT
T ss_pred CCCCC--CCCCEEEECCHHHHHHHHhccccccccCCCCcEEEECcHHHHHHHhhCCCCCEEEEEEcccccCCCccCCccc
Confidence 97542 1356889999999999998631000 247899999999999999999999999999999999999999 98
Q ss_pred Ccc----CceEeeec------------cCceeCcccEEEEEEEEc
Q 024737 230 DLS----LFQQRYSS------------QPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 230 d~~----~f~~~~~~------------~~~~en~~~~~f~~Y~r~ 258 (263)
+.+ .|+++.++ ..+++|++.|.|++|+|+
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~y~f~~y~r~ 205 (206)
T 3nzb_X 161 RDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRD 205 (206)
T ss_dssp TSGGGTTTCEECCHHHHHHHHTSCCCCSCEEETTEEEEEEEEECC
T ss_pred CcccccCCcEEEEEeeccccccccccccccccCCeeEEEEEEEEc
Confidence 853 69987543 135789999999999996
No 4
>3ia4_A Dihydrofolate reductase; NADPH, methotrexate, oxidoreductase; HET: NDP MTX; 1.70A {Moritella profunda} SCOP: c.71.1.0 PDB: 3ia5_A 2zza_A*
Probab=100.00 E-value=9.5e-46 Score=313.91 Aligned_cols=159 Identities=33% Similarity=0.599 Sum_probs=143.1
Q ss_pred cEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCCC
Q 024737 80 PYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNI 159 (263)
Q Consensus 80 kIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~~ 159 (263)
+|++|+|+|+||+||++|+|||++|+|++||+++|+ +++|||||||||+++ +|||+|+|||+||++...
T Consensus 2 ~i~li~A~s~dg~IG~~g~lpW~~~~D~~~Fk~~t~-------g~~vIMGRkTyesi~---~plp~r~~iVlSr~~~~~- 70 (162)
T 3ia4_A 2 IVSMIAALANNRVIGLDNKMPWHLPAELQLFKRATL-------GKPIVMGRNTFESIG---RPLPGRLNIVLSRQTDYQ- 70 (162)
T ss_dssp EEEEEEEECGGGEEEBTTBCSSCCHHHHHHHHHHHT-------TSCEEEEHHHHHHHC---SCCTTSCEEEECCCTTCC-
T ss_pred EEEEEEEECCCCcEECCCCcCCCCHhHHHHHHHHhc-------CcEEEEEchHHhhhh---hhcCCCeEEEEcCCCCCC-
Confidence 699999999999999999999999999999999998 499999999999997 799999999999997543
Q ss_pred CCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCCCCccCceEeee
Q 024737 160 ASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYS 239 (263)
Q Consensus 160 ~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~~~~ 239 (263)
.+++.+++|+++|++.+++ .++|||+||+++|+++| ++||+++||+||..++||+|||+++.+.|+++..
T Consensus 71 --~~~~~v~~s~~~al~~l~~------~~~i~viGG~~iy~~~l--~l~Del~lT~i~~~~~gd~~Fp~~~~~~w~~~~~ 140 (162)
T 3ia4_A 71 --PEGVTVVATLEDAVVAAGD------VEELMIIGGATIYNQCL--AAADRLYLTHIELTTEGDTWFPDYEQYNWQEIEH 140 (162)
T ss_dssp --CTTSEEESSHHHHHHHHTT------CSEEEECCCHHHHHHHG--GGCSEEEEEEECCCCCCSEECCCGGGSCEEEEEE
T ss_pred --CCCeEEECCHHHHHHHhhC------CCCEEEECCHHHHHHHH--HhCCEEEEEEccccccccccCCCCChHHCEEEEE
Confidence 3678899999999999975 37999999999999999 4899999999999999999999999889998765
Q ss_pred cc--CceeCcccEEEEEEEEcC
Q 024737 240 SQ--PLVENNIQFSFVTYVRVG 259 (263)
Q Consensus 240 ~~--~~~en~~~~~f~~Y~r~~ 259 (263)
+. ..++|+++|.|++|+|++
T Consensus 141 ~~~~~~~~~~~~~~f~~y~r~~ 162 (162)
T 3ia4_A 141 ESYAADDKNPHNYRFSLLERVK 162 (162)
T ss_dssp EEECCBTTBCSCEEEEEEEEC-
T ss_pred EeccccCCCCccEEEEEEEECC
Confidence 32 245688899999999963
No 5
>3s9u_A Dihydrofolate reductase; oxidoreductase; HET: NAP 5DR; 1.90A {Bacillus anthracis} PDB: 3sa1_A* 3sa2_A* 3sai_A* 3e0b_A* 3jvx_A* 3jwm_A* 3jwk_A* 3jw5_A* 3jwf_A* 3jwc_A* 3jw3_A* 3dat_A* 2qk8_A* 3fl8_A* 3fl9_A* 2kgk_A*
Probab=100.00 E-value=1.8e-45 Score=313.07 Aligned_cols=159 Identities=35% Similarity=0.672 Sum_probs=144.5
Q ss_pred cEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCCC
Q 024737 80 PYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNI 159 (263)
Q Consensus 80 kIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~~ 159 (263)
+|++|+|+|+||+||++|+|||++|+|++||+++|+ +++|||||||||++| +|||+|+|||+||++...
T Consensus 5 ~i~li~A~s~dg~Ig~~g~lpW~~~~D~~~F~~~t~-------~~~vIMGRkTyesi~---~plp~r~~iVlSr~~~~~- 73 (165)
T 3s9u_A 5 RVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTM-------GHPLIMGRKNYEAIG---RPLPGRRNIIVTRNEGYH- 73 (165)
T ss_dssp EEEEEEEEETTCEEEBTTBCSCCCHHHHHHHHHHHT-------TSCEEEEHHHHHHHC---SCCTTSCEEEECSCTTCC-
T ss_pred EEEEEEEECCCCcEECCCCcCCCCHhHHHHHHHhhc-------CCEEEEcchHHhhhh---hccCCCeEEEECCCCccC-
Confidence 699999999999999999999999999999999998 499999999999998 799999999999997543
Q ss_pred CCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCCCCccCceEeee
Q 024737 160 ASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYS 239 (263)
Q Consensus 160 ~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~~~~ 239 (263)
.+++.+++|+++|++.+++. ++|||+||+++|+++| ++||+++||+||..++||+|||+++.+.|+++..
T Consensus 74 --~~~v~v~~~~~~al~~l~~~------~~i~viGG~~iy~~~l--~l~Del~lT~ip~~~~Gd~~Fp~~~~~~~~l~~~ 143 (165)
T 3s9u_A 74 --VEGCEVAHSVEEVFELCKNE------EEIFIFGGAQIYDLFL--PYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFV 143 (165)
T ss_dssp --CTTCEEESSHHHHHHHTTTC------SEEEECCCHHHHHHHG--GGCCEEEEEEESSCCCCSEECCCCCCTTEEEEEE
T ss_pred --CCCEEEECCHHHHHHHhhcC------CCEEEECCHHHHHHHH--hhCCEEEEEEccccccCCCcCCCCChHHCEEEEE
Confidence 36788889999999998853 6999999999999999 7999999999999999999999999889998865
Q ss_pred cc--CceeCcccEEEEEEEEcC
Q 024737 240 SQ--PLVENNIQFSFVTYVRVG 259 (263)
Q Consensus 240 ~~--~~~en~~~~~f~~Y~r~~ 259 (263)
+. ..++|+++|.|++|+|++
T Consensus 144 ~~~~~~~~~~~~~~f~~y~r~~ 165 (165)
T 3s9u_A 144 EKGLTDEKNPYTYYYHVYEKQQ 165 (165)
T ss_dssp EECCCSSSSCSCEEEEEEEECC
T ss_pred EeccccCCCCceEEEEEEEECC
Confidence 33 246788999999999974
No 6
>3dau_A Dihydrofolate reductase; oxidoreductase, pseudo-rossmann fold, adenine nucleotide BIN domain, antibiotic resistance, methotrexate resistance; HET: MTX NAP; 1.50A {Escherichia coli} SCOP: c.71.1.1 PDB: 1ddr_A* 1dds_A* 3k74_A 1ra9_A* 1dre_A* 1drh_A* 1dyi_A* 1dyh_A* 1jol_A* 1jom_A* 1ra1_A* 1dyj_A* 1ra3_A* 1ra8_A* 1ra2_A* 1rb2_A* 1rb3_A* 1rc4_A* 1rd7_A* 1re7_A* ...
Probab=100.00 E-value=2.5e-45 Score=310.67 Aligned_cols=157 Identities=32% Similarity=0.610 Sum_probs=141.6
Q ss_pred cEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCCC
Q 024737 80 PYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNI 159 (263)
Q Consensus 80 kIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~~ 159 (263)
+|++|+|+|+||+||++|+|||++|+|++||+++|++ ++|||||||||++| +|||+|+|||+||++ ..
T Consensus 1 mi~li~A~s~~g~IG~~g~lpW~l~~D~~~Fk~~t~~-------~~vIMGRkT~esi~---~plp~r~~iVlSr~~-~~- 68 (159)
T 3dau_A 1 MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLN-------KPVIMGRHTWESIG---RPLPGRKNIILSSQP-GT- 68 (159)
T ss_dssp CEEEEEEECGGGEEEBTTBCSSCCHHHHHHHHHHHTT-------SCEEEEHHHHHHHC---SCCTTSCEEEECSSC-CS-
T ss_pred CEEEEEEECCCCeEECCCCcCcCChhHHHHHHHHhcC-------CeEEEechHHhhcc---cccCCCEEEEECCCC-CC-
Confidence 4899999999999999999999999999999999984 89999999999997 699999999999997 42
Q ss_pred CCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCCCCccCceEeee
Q 024737 160 ASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYS 239 (263)
Q Consensus 160 ~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~~~~ 239 (263)
.+++.+++|+++|++.++ +.++|||+||+++|+++| ++||+++||+||..++||+|||+++.+.|+++..
T Consensus 69 --~~~~~v~~s~~~al~~~~------~~~~i~iiGG~~iy~~~l--~~~D~l~lT~i~~~~~Gd~~Fp~~~~~~~~~~~~ 138 (159)
T 3dau_A 69 --DDRVTWVKSVDEAIAACG------DVPEIMVIGGGRVYEQFL--PKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFS 138 (159)
T ss_dssp --CTTSEEESSHHHHHHTTC------SCSCEEECCCHHHHHHHG--GGCSEEEEEEECCCCCCSEECCCCCGGGEEEEEE
T ss_pred --CCCeEEECCHHHHHHHhc------CCCCEEEECCHHHHHHHH--hhCCEEEEEEcccccCccccCCCCChHHCEEEEE
Confidence 467889999999998875 357999999999999999 5899999999999999999999999889998764
Q ss_pred cc-C-ceeCcccEEEEEEEEc
Q 024737 240 SQ-P-LVENNIQFSFVTYVRV 258 (263)
Q Consensus 240 ~~-~-~~en~~~~~f~~Y~r~ 258 (263)
+. + .++|+++|.|.+|+|+
T Consensus 139 ~~~~~~~~~~~~~~f~~y~r~ 159 (159)
T 3dau_A 139 EFHDADAQNSHSYCFEILERR 159 (159)
T ss_dssp EEECCBTTBSSCEEEEEEEEC
T ss_pred EecccccCCCceEEEEEEEEC
Confidence 32 2 3568899999999995
No 7
>3ix9_A Dihydrofolate reductase; central beta sheet surrounded by 4 alpha helices, oxidoreductase; HET: NDP MTX; 1.95A {Streptococcus pneumoniae}
Probab=100.00 E-value=8.5e-44 Score=309.16 Aligned_cols=166 Identities=30% Similarity=0.512 Sum_probs=146.8
Q ss_pred CCCCcEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCC
Q 024737 76 RARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSG 155 (263)
Q Consensus 76 ~~~rkIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~ 155 (263)
.+||||++|+|+|+||+||.+|+|||++|+|++||+++|. ++++||||||||+++. +|||+|+|||+||++
T Consensus 20 ~M~r~i~~i~A~s~dG~IG~~g~lpW~~~~D~~~fk~~t~-------~~~vIMGRkTyesi~~--~plp~r~~iVlSr~~ 90 (190)
T 3ix9_A 20 GMTKKIVAIWAQDEEGVIGKDNRLPWYLPAELQHFKETTL-------NHAILMGRVTFDGMGR--RLLPKRETLILTRNP 90 (190)
T ss_dssp --CCCEEEEEEECTTCEEEBTTBCSCCCHHHHHHHHHHHT-------TSEEEEEHHHHHHTTT--CCCTTCEEEEECCSC
T ss_pred CcceeEEEEEEECCCCcEeCCCCcCCCChHHHHHHHHHhc-------CCeEEEcCcchhhcCc--cCCCCCEEEEEcCCC
Confidence 3488899999999999999999999999999999999998 5999999999999984 799999999999997
Q ss_pred CCCCCCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCC-CCccCc
Q 024737 156 SFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPA-IDLSLF 234 (263)
Q Consensus 156 ~~~~~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~-~d~~~f 234 (263)
... .+++.+++|+++|++.+++. +++|||+||+++|+++| ++||+++||+||...+||+|||+ ++...|
T Consensus 91 ~~~---~~~~~v~~~~~eal~~lk~~-----~~~i~ViGG~~ly~~~l--~liDel~lt~ip~~g~Gd~lFp~~~~~~~~ 160 (190)
T 3ix9_A 91 EEK---IDGVATFHDVQSVLDWYSAQ-----EKNLYIVGGKQIFQAFE--PYLDEVIVTHIHARVEGDTYFPAEFDLSLF 160 (190)
T ss_dssp CSC---CSSSEEESSHHHHHHHHHTS-----CSCEEEEECHHHHHHHG--GGCSEEEEEEESSCCCCSEECCCCCCGGGE
T ss_pred CCC---CCCEEEECCHHHHHHHHHhC-----CCCEEEECCHHHHHHHH--hhCCEEEEEEeCcccccCCcCCCCCCcccc
Confidence 543 35788889999999999863 58999999999999999 59999999999999999999999 988889
Q ss_pred eEeeecc-C-ceeCcccEEEEEEEEcCC
Q 024737 235 QQRYSSQ-P-LVENNIQFSFVTYVRVGN 260 (263)
Q Consensus 235 ~~~~~~~-~-~~en~~~~~f~~Y~r~~~ 260 (263)
+++.... . .++|++.|+|++|+|++-
T Consensus 161 ~lv~~~~~~~~~~~~~~~~f~~y~r~~~ 188 (190)
T 3ix9_A 161 ETVSSKFYTKDEKNPYDFTIQYRKRKEV 188 (190)
T ss_dssp EEEEEEEECCBTTBCSCEEEEEEEECC-
T ss_pred EEEEEEeccCCCcCCceEEEEEEEEeec
Confidence 9876532 2 356888999999999854
No 8
>1kmv_A DHFR, dihydrofolate reductase; oxidoreductase, antiparasitic drugs, lipophilic antifolates; HET: LII NDP; 1.05A {Homo sapiens} SCOP: c.71.1.1 PDB: 1dhf_A* 1hfr_A* 1drf_A* 1kms_A* 1ohj_A* 1ohk_A* 1pd8_A* 1pd9_A* 1pdb_A 1s3u_A* 1s3v_A* 1s3w_A* 1u72_A* 1yho_A* 2c2s_A* 2c2t_A* 2dhf_A* 3ghw_A* 3ntz_A* 3nu0_A* ...
Probab=100.00 E-value=6.3e-44 Score=307.41 Aligned_cols=177 Identities=34% Similarity=0.646 Sum_probs=154.3
Q ss_pred CcEEEEEEEeCCCeeecCCCCCC-CChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCC
Q 024737 79 RPYQVVVAATHDMGIGKDGKLPW-NLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSF 157 (263)
Q Consensus 79 rkIilivAvS~dG~IG~~G~LpW-~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~ 157 (263)
|||++++|+|+||+||.+|+||| ++|+|+++|+++|.+..+|++.+++||||||||+++...||||+|+|||+||++..
T Consensus 2 r~i~~i~A~s~dG~Ig~~g~lpW~~~~~d~~~f~~~t~~~~~~~~~d~viMGRkTyes~~~~~~pl~~r~~iVlSr~~~~ 81 (186)
T 1kmv_A 2 GSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKE 81 (186)
T ss_dssp CCEEEEEEECTTCEEEBTTBCSSCCCHHHHHHHHHHHHCCSSTTCEEEEEEEHHHHHHSCGGGCSCTTSEEEEECSSCSS
T ss_pred ceEEEEEEECCCCCEeCCCccCCccCcHHHHHHHHHHcCCCCcCCccEEEEechHHhhcCcccCCCCCCeEEEECCCCcc
Confidence 68999999999999999999999 99999999999999855566667999999999999854589999999999999753
Q ss_pred CCCCCCCe-EEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCCCCccCceE
Q 024737 158 NIASLENV-EICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQ 236 (263)
Q Consensus 158 ~~~~~~~v-~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~ 236 (263)
. .+++ .+++|++++++.|++.+...++++|||+||+++|+++|++++||+++||++|..++||+|||.++...|++
T Consensus 82 ~---~~~~~~v~~~~~~al~~lk~~~~~~~~~~i~ViGG~~l~~~~l~~~lvDel~lt~ip~~~g~d~~Fp~~~~~~~~l 158 (186)
T 1kmv_A 82 P---PQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKL 158 (186)
T ss_dssp C---CTTCSEEESSHHHHHHHHTSTTTTTTEEEEEECCCHHHHHHHHTSCSCEEEEEEEESSCCCCSEECCCCCTTTCEE
T ss_pred C---CCCCEEEECCHHHHHHHHhhcccccCCCeEEEEcCHHHHHHHhcCCCCCEEEEEEeCcccCCCeECCCCChhHcEE
Confidence 2 3566 78899999999998752122478999999999999999999999999999999999999999998788998
Q ss_pred eeec-----cCceeCcccEEEEEEEEc
Q 024737 237 RYSS-----QPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 237 ~~~~-----~~~~en~~~~~f~~Y~r~ 258 (263)
+... ..+++|++.|+|.+|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~f~~y~r~ 185 (186)
T 1kmv_A 159 LPEYPGVLSDVQEEKGIKYKFEVYEKN 185 (186)
T ss_dssp CSCCTTCCCSCEEETTEEEEEEEEEEC
T ss_pred EEeccccccccccCCCceEEEEEEEEC
Confidence 7652 235688899999999996
No 9
>3dfr_A Dihydrofolate reductase; oxido-reductase; HET: NDP MTX; 1.70A {Lactobacillus casei} SCOP: c.71.1.1 PDB: 1ao8_A* 1bzf_A* 1dis_A* 1diu_A* 1lud_A* 2hm9_A* 2hqp_A* 2l28_A 2lf1_A*
Probab=100.00 E-value=3.6e-44 Score=303.86 Aligned_cols=159 Identities=28% Similarity=0.506 Sum_probs=143.9
Q ss_pred EEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCCCCC
Q 024737 82 QVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIAS 161 (263)
Q Consensus 82 ilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~~~~ 161 (263)
++|+|+|+||+||++|+|||++|+|++||+++|+ ++++||||||||+++. +|||+|+|||+||++...
T Consensus 2 ~li~A~s~dg~IG~~g~lpW~~~~D~~~F~~~t~-------~~~viMGRkTyes~~~--~plp~r~~iVlS~~~~~~--- 69 (162)
T 3dfr_A 2 AFLWAQNRNGLIGKDGHLPWHLPDDLHYFRAQTV-------GKIMVVGRRTYESFPK--RPLPERTNVVLTHQEDYQ--- 69 (162)
T ss_dssp EEEEEECTTCEEEBTTBCSSCCHHHHHHHHHTTT-------TSEEEEEHHHHHHSSS--SSCTTSEEEEECSCTTCC---
T ss_pred EEEEEECCCCeEeCCCCCCCCcHHHHHHHHHHhc-------CCeEEEecchhhhccc--ccCCCCcEEEEcCCCCCC---
Confidence 5899999999999999999999999999999998 5999999999999984 699999999999997543
Q ss_pred CCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCCCCccCceEeeecc
Q 024737 162 LENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQ 241 (263)
Q Consensus 162 ~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~~~~~~ 241 (263)
.+++.+++|++++++.+++. ++++|||+||+++|+++| ++||+++||+||..++||+|||+++...|+++..+.
T Consensus 70 ~~~~~~~~~~~~~l~~lk~~----~~~~i~viGG~~l~~~~l--~l~Del~lT~i~~~~~Gd~~Fp~~~~~~~~l~~~~~ 143 (162)
T 3dfr_A 70 AQGAVVVHDVAAVFAYAKQH----LDQELVIAGGAQIFTAFK--DDVDTLLVTRLAGSFEGDTKMIPLNWDDFTKVSSRT 143 (162)
T ss_dssp CTTSEEESSHHHHHHHHHHC----CSSCEEECCCHHHHHHTG--GGCCEEEEEEESSCCCCSEECCCCCGGGEEEEEEEE
T ss_pred CCCEEEECCHHHHHHHHhcC----CCCCEEEECCHHHHHHHH--hhCCEEEEEEecccccccCcCCCCChhHcEEEEEEc
Confidence 46788889999999999975 578999999999999999 699999999999999999999999988899886544
Q ss_pred -CceeCcccEEEEEEEEc
Q 024737 242 -PLVENNIQFSFVTYVRV 258 (263)
Q Consensus 242 -~~~en~~~~~f~~Y~r~ 258 (263)
..++|++.|.|.+|+|+
T Consensus 144 ~~~~~~~~~~~f~~y~r~ 161 (162)
T 3dfr_A 144 VEDTNPALTHTYEVWQKK 161 (162)
T ss_dssp ECCSSGGGCEEEEEEEEC
T ss_pred ccccCCCceEEEEEEEEC
Confidence 34578889999999996
No 10
>2bl9_A Dihydrofolate reductase-thymidylate synthase; plamodium vivax, pyrimethamine, malaria, drug resistance, oxidoreductase; HET: NDP CP6; 1.9A {Plasmodium vivax} PDB: 2blb_A* 2blc_A* 2bla_A*
Probab=100.00 E-value=3e-43 Score=315.24 Aligned_cols=174 Identities=34% Similarity=0.543 Sum_probs=151.5
Q ss_pred cEEEEEEEeCCCeeecCCCCCC-CChhhHHHHHHHhhCCC--------------------------------------CC
Q 024737 80 PYQVVVAATHDMGIGKDGKLPW-NLPSDLKFFKQLTMSTS--------------------------------------DP 120 (263)
Q Consensus 80 kIilivAvS~dG~IG~~G~LpW-~~~eD~~~F~~~T~~~~--------------------------------------~~ 120 (263)
+..+++|++.||+||.+|+||| |+|+||+||+++|+++. .+
T Consensus 26 ~~~~~~~~~~~~~IG~~g~LPW~~l~~Dm~~Fk~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~f~~ 105 (238)
T 2bl9_A 26 TKNEPFSPRTFRGLGNKGTLPWKCNSVDMKYFSSVTTYVDESKYEKLKWKRERYLRMEASQGGGDNTSGGDNTHGGDNAD 105 (238)
T ss_dssp SCCCTTCSCSSCEEEBTTBCSSSCCHHHHHHHHHHHHCCCGGGHHHHHHHHHHHHHHHC---------------------
T ss_pred cEEEEEEecCCCeecCCCcCCCcCCHHHHHHHHHHhcccccccccccCCCcceecccccccCCccccccccccccccccc
Confidence 5678889999999999999999 99999999999998421 11
Q ss_pred CCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCCCCCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHH
Q 024737 121 GKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILR 200 (263)
Q Consensus 121 ~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~~~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~ 200 (263)
+.+++|||||||||++|..+||||+|+|||+||++.... ..+++.+++|+++|++.+++. ++++|||+||++||+
T Consensus 106 ~~g~~VIMGRkTyEsi~~~~~PLp~R~nIVlSr~~~~~~-~~~~v~v~~sl~eal~~lk~~----~~~~I~ViGGa~Iy~ 180 (238)
T 2bl9_A 106 KLQNVVVMGRSSWESIPKQYKPLPNRINVVLSKTLTKED-VKEKVFIIDSIDDLLLLLKKL----KYYKCFIIGGAQVYR 180 (238)
T ss_dssp CCCEEEEEEHHHHHTSCGGGCSCTTEEEEEECSSCCTTT-CCSSCEEESCHHHHHHHHHTC----CCSCEEEEECHHHHH
T ss_pred ccCCEEEEchhHhhhhcccccCcCCCEEEEEeCCCcccc-CCCCEEEECCHHHHHHHHHhC----CCCCEEEECcHHHHH
Confidence 225999999999999985457999999999999964321 146788889999999999875 578999999999999
Q ss_pred HHhCCCCcCEEEEEEECCccCCceecCCCCccCceEeeeccCceeCcccEEEEEEEEc
Q 024737 201 EALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 201 ~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~~~~~~~~~en~~~~~f~~Y~r~ 258 (263)
++|++++||+++||+||..++||+|||.++...|+++..+..+.+|++.|+|.+|+|+
T Consensus 181 ~~L~~glvDel~lT~ip~~~gGD~~FP~~d~~~~~lv~~~~~~~~~~~~~~f~~y~r~ 238 (238)
T 2bl9_A 181 ECLSRNLIKQIYFTRINGAYPCDVFFPEFDESEFRVTSVSEVYNSKGTTLDFLVYSKV 238 (238)
T ss_dssp HHHHTTCCSEEEEEEEEEEECCSEECCCCCGGGEEEEEECCCEEETTEEEEEEEEEEC
T ss_pred HHhcccCCCEEEEEEeccccCCceeCCCCCchhcEEEEEEecccCCCccEEEEEEEeC
Confidence 9999999999999999999999999999998889988776666789999999999985
No 11
>3irm_A Bifunctional dihydrofolate reductase-thymidylate; DHFR-TS antifolate complex, methyltransfe multifunctional enzyme, NADP; HET: 1CY; 2.10A {Trypanosoma cruzi} PDB: 3inv_A* 3irn_A* 3iro_A* 2h2q_A* 3cl9_A* 3clb_A* 3hbb_A* 3kjs_A*
Probab=100.00 E-value=7.3e-43 Score=341.54 Aligned_cols=184 Identities=42% Similarity=0.717 Sum_probs=158.7
Q ss_pred CCCCcEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhC------CCCCCCCCEEEEcchhhhhccCCCCCCCCCcEE
Q 024737 76 RARRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMS------TSDPGKRNAVVMGRKTWESISPLYRPLPGRLNV 149 (263)
Q Consensus 76 ~~~rkIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~------~~~~~~~~avIMGRkTyeslp~~~~plp~r~nI 149 (263)
..|++|.+|+|+++||+||.+|+|||++|+||+||+++|++ ..+|++.++||||||||||+|.+++|||+|.||
T Consensus 18 ~~~~~islIvA~~~ng~IG~~g~LPW~Lp~Dmk~Fk~~T~g~~~~~~~~~~~~~naVIMGRKT~ESIP~k~rPLP~R~NI 97 (521)
T 3irm_A 18 LALRAFSLVVAVDEHGGIGDGRSIPWNVPEDMKFFRDLTTKLRGKNVKPSPAKRNAVVMGRKTWDSIPPKFRPLPGRLNV 97 (521)
T ss_dssp CSSCCEEEEEEEETTSEEESSSCCCCCCHHHHHHHHHHHHCCSSSSCCCBTTBEEEEEEEHHHHHTSCGGGCSCTTEEEE
T ss_pred cCCceEEEEEEECCCCceecCCCcCCCChhHHHHHHHHhcCCCcccccCcccccceEEEecchhhCcccccCCCCCCeEE
Confidence 44899999999999999999999999999999999999998 566788899999999999999766899999999
Q ss_pred EEcCCCCCC-----C--------CCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCC---CcCEEEE
Q 024737 150 VLTHSGSFN-----I--------ASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAP---ECDAIHI 213 (263)
Q Consensus 150 VlSrt~~~~-----~--------~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~---lvDel~L 213 (263)
||||+.... . ...+++.+++|+++|++.+++.+...+.++||||||++||+++|+++ +||+++|
T Consensus 98 VLSR~~~~~~~~~~~p~~~~~~~~~~~~v~V~~SleeAL~~l~~~~~~~~~~~VfVIGGa~IY~~~L~~~~~~l~D~l~l 177 (521)
T 3irm_A 98 VLSSTLTTQHLLDGLPDEEKRNLHADSIVAVNGGLEQALRLLASPNYTPSIETVYCIGGGSVYAEALRPPCVHLLQAIYR 177 (521)
T ss_dssp EECSSCCHHHHHHTSSSHHHHHHHGGGEEEESSCHHHHHHHHTSTTTTTTEEEEEECCCHHHHHHHTSTTGGGGEEEEEE
T ss_pred EEecccccccccccccccccccccCCCCeEEECCHHHHHHHHhccccccCCCeEEEEcCHHHHHHHHhCCccccCCEEEE
Confidence 999997531 0 01356889999999999998752222468999999999999999999 9999999
Q ss_pred EEEC-CccCCceec--CCCCccC-----ceEeeeccCce-eCc--ccEEEEEEEEcC
Q 024737 214 TKIE-TSIECDTFI--PAIDLSL-----FQQRYSSQPLV-ENN--IQFSFVTYVRVG 259 (263)
Q Consensus 214 T~I~-~~leGD~fF--P~~d~~~-----f~~~~~~~~~~-en~--~~~~f~~Y~r~~ 259 (263)
|+|+ ..++||+|| |++|.+. |+++..++... +++ +.|+|++|+|++
T Consensus 178 T~I~p~~~egDtfFp~P~~d~~~~~~~~w~~~~~~~~~~~~~~~~~~y~F~~y~r~n 234 (521)
T 3irm_A 178 TTIRASESSCSVFFRVPESGTEAAAGIEWQRETISEELTSANGNETKYYFEKLIPRN 234 (521)
T ss_dssp EEECCSSCCCSEECCCCCTTSGGGTTCCEEEEEECCCEECSSSSCCEEEEEEEEECC
T ss_pred EEecCCCcccceecCCCCCChhhccccceEEEEeecccccCCCCeeeEEEEEEEECC
Confidence 9999 888999999 9999876 99887654443 366 899999999974
No 12
>3nrr_A Dihydrofolate reductase-thymidylate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, niaid, DHFR; HET: NAP D16 UMP; 1.80A {Babesia bovis} PDB: 3kjr_A* 3i3r_A* 3k2h_A*
Probab=100.00 E-value=9.5e-43 Score=340.35 Aligned_cols=179 Identities=26% Similarity=0.490 Sum_probs=159.4
Q ss_pred ccCCCCcEEEEEEEeCCCeeecCCCCCCC-ChhhHHHHHHHhhC------CCCCCCCCEEEEcchhhhhccCCCCCCCCC
Q 024737 74 HLRARRPYQVVVAATHDMGIGKDGKLPWN-LPSDLKFFKQLTMS------TSDPGKRNAVVMGRKTWESISPLYRPLPGR 146 (263)
Q Consensus 74 ~~~~~rkIilivAvS~dG~IG~~G~LpW~-~~eD~~~F~~~T~~------~~~~~~~~avIMGRkTyeslp~~~~plp~r 146 (263)
|..+||+|++|+|+|+||+||++|+|||+ +|+|++||+++|++ ...|++.++|||||||||++|..++|||+|
T Consensus 8 ~~~~MrkI~livA~SldG~IG~dg~LpW~~lp~Dlk~Fk~~T~g~p~~~~~~~~~~i~aVIMGRKTyESip~~~rPLp~R 87 (515)
T 3nrr_A 8 SYEGCGDLTIFVAVALNKVIGHKNQIPWPHITHDFRFLRNGTTYIPPEVLSKNPDIQNVVIFGRKTYESIPKASLPLKNR 87 (515)
T ss_dssp TTTTCCCEEEEEEECTTSEEEBTTBCSSCCCHHHHHHHHHHHHCCCHHHHHHSTTCCEEEEEEHHHHHTSCGGGCSCTTE
T ss_pred CCCCCceEEEEEEECCCCcCCCCCCCCCcCCchHHHHHHHHHcCCCccccccccccCCEEEEcchHHHhhhhccCCCCCC
Confidence 44669999999999999999999999999 99999999999986 234567799999999999998645899999
Q ss_pred cEEEEcCCCCCCCCCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceec
Q 024737 147 LNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFI 226 (263)
Q Consensus 147 ~nIVlSrt~~~~~~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fF 226 (263)
+||||||++.. .+++.+++|+++|++.|++. .++++|||+||++||+++|++++||+++||+||..++||+||
T Consensus 88 ~nIVlSrt~~~----~~~v~V~~sl~eal~~Lk~~---~~~~~I~VIGGg~Iy~~~L~~~liDel~LT~I~~~~~GDtfF 160 (515)
T 3nrr_A 88 INVILSRTVKE----VPGCLVYEDLSTAIRDLRAN---VPHNKIFILGGSFLYKEVLDNGLCDKIYLTRLNKEYPGDTYF 160 (515)
T ss_dssp EEEEECSSCCC----CTTEEEESSHHHHHHHHHHH---SCCSCEEECCCHHHHHHHHHTTCEEEEEEEEESSCCCCSEEC
T ss_pred eEEEECCCCCC----CCCEEEECCHHHHHHHHhhc---cCCCCEEEECCHHHHHHHhhCCCCCEEEEEEecCccCCCccC
Confidence 99999999742 35788999999999999864 146899999999999999999999999999999999999999
Q ss_pred CCCCccCceEeeeccCceeCcccEEEEEEEEcCC
Q 024737 227 PAIDLSLFQQRYSSQPLVENNIQFSFVTYVRVGN 260 (263)
Q Consensus 227 P~~d~~~f~~~~~~~~~~en~~~~~f~~Y~r~~~ 260 (263)
|++ .+.|+++.++..++++++.|+|++|+|+++
T Consensus 161 P~~-~~~w~~v~~~~~~~~~~~~y~F~~y~R~~~ 193 (515)
T 3nrr_A 161 PDI-PDTFEITAISPTFSTDFVSYDFVIYERKDC 193 (515)
T ss_dssp CCC-CTTEEEEEECCCEECSSCEEEEEEEEECC-
T ss_pred CCc-hhhCEEEEEecccccCCCceEEEEEEEccc
Confidence 999 788999877666678999999999999854
No 13
>2w3w_A Dihydrofolate reductase; nonclassical antifolates, one-carbon metabolism, lipophilic antifolates, NADP, oxidoreductase; HET: VG9 NDP; 1.60A {Mycobacterium avium} PDB: 2w3v_A*
Probab=100.00 E-value=5.8e-42 Score=291.12 Aligned_cols=162 Identities=36% Similarity=0.583 Sum_probs=139.8
Q ss_pred CCcEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCC
Q 024737 78 RRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSF 157 (263)
Q Consensus 78 ~rkIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~ 157 (263)
+++|++++|+|+||+||.+|+|||++|+|+++|++.|. .+++||||||||+++...||||+|+|||+||++..
T Consensus 3 ~~~i~~i~A~s~dG~Ig~~g~lpW~~~~d~~~f~~~t~-------~~~viMGRkTyes~~~~~~pl~~r~~iV~S~~~~~ 75 (167)
T 2w3w_A 3 RAEVGLVWAQSTSGVIGRGGDIPWSVPEDLTRFKEVTM-------GHTVIMGRRTWESLPAKVRPLPGRRNVVVSRRPDF 75 (167)
T ss_dssp CCCCEEEEEEETTSEEEBTTBCSCCCHHHHHHHHHHHT-------TSEEEEEHHHHHHSCGGGSSCTTSEEEEECSCTTC
T ss_pred ceEEEEEEEECCCCcCcCCCCcCccchHHHHHHHHHhc-------CCeEEEcchHhhhcCccccCCCCCeEEEEeCCCCC
Confidence 34599999999999999999999999999999999998 48999999999999854489999999999999654
Q ss_pred CCCCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCcc---CCceecCCCCccCc
Q 024737 158 NIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSI---ECDTFIPAIDLSLF 234 (263)
Q Consensus 158 ~~~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~l---eGD~fFP~~d~~~f 234 (263)
. .+++.+++|+++++ .+++ ++++|||+||+++|+++|+ +||+++||++|..+ +||+|||+++.+ |
T Consensus 76 ~---~~~~~~~~~~~~~l-~l~~-----~~~~i~ViGG~~l~~~~l~--lvDel~lt~ip~~~G~~~Gd~~Fp~~~~~-~ 143 (167)
T 2w3w_A 76 V---AEGARVAGSLEAAL-AYAG-----SDPAPWVIGGAQIYLLALP--HATRCEVTEIEIDLRRDDDDALAPALDDS-W 143 (167)
T ss_dssp C---CTTSEEESSHHHHH-HHTT-----TCSSCEEEECHHHHHHHGG--GCSEEEEEEEECCCCCCTTSEECCCCCTT-C
T ss_pred C---CCCEEEECCHHHHH-Hhhc-----CCCeEEEEchHHHHHHHHH--HCCEEEEEEEEeecCCCCccEeCCCCCcc-c
Confidence 2 46788888999999 4543 5689999999999999995 99999999999999 899999999876 9
Q ss_pred eEeeeccCceeCcccEEEEEEEEc
Q 024737 235 QQRYSSQPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 235 ~~~~~~~~~~en~~~~~f~~Y~r~ 258 (263)
++..+...++++++.|.|.+|+|+
T Consensus 144 ~l~~~~~~~~~~~~~~~f~~y~r~ 167 (167)
T 2w3w_A 144 VGETGEWLASRSGLRYRFHSYRRD 167 (167)
T ss_dssp EEEECCCEECTTSCEEEEEEEEC-
T ss_pred EEeeccccccCCCCcEEEEEEEeC
Confidence 883333335566699999999985
No 14
>1zdr_A Dihydrofolate reductase; DHFR, NADP, oxidoreductase; 2.00A {Geobacillus stearothermophilus}
Probab=100.00 E-value=2.9e-41 Score=285.33 Aligned_cols=158 Identities=39% Similarity=0.633 Sum_probs=141.2
Q ss_pred EEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCCCC
Q 024737 81 YQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIA 160 (263)
Q Consensus 81 IilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~~~ 160 (263)
|++++|+|+||+||++|+|||++|+|+++|+++|. ++++||||||||+++ ||||+|+|||+||++...
T Consensus 2 i~~~~A~s~dG~Ig~~g~l~W~~~~d~~~f~~~t~-------~~~vimGRkTyes~~---~pl~~r~~iV~S~~~~~~-- 69 (164)
T 1zdr_A 2 ISHIVAMDENRVIGKDNRLPWHLPADLAYFKRVTM-------GHAIVMGRKTFEAIG---RPLPGRDNVVVTGNRSFR-- 69 (164)
T ss_dssp EEEEEEEETTCEEEBTTBCSSCCHHHHHHHHHHHT-------TSEEEEEHHHHHHHC---SCCTTSEEEEECSCTTCC--
T ss_pred EEEEEEEcCCCeEeCCCCcccCCHHHHHHHHHHhc-------CCEEEECCcHHhcCC---CCCCCCeEEEEcCCCCcC--
Confidence 89999999999999999999999999999999887 599999999999997 799999999999997532
Q ss_pred CCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCCCCccCceEeeec
Q 024737 161 SLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYSS 240 (263)
Q Consensus 161 ~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~~~~~ 240 (263)
.+++.+++|++++++.+++ ++++|||+||+++|+++|+ +|||++||++|..++||+|||.++...|+++...
T Consensus 70 -~~~~~~~~~~~~~l~~l~~-----~~~~i~viGG~~l~~~~l~--lvDel~lt~ip~~~~G~~~Fp~~~~~~~~l~~~~ 141 (164)
T 1zdr_A 70 -PEGCLVLHSLEEVKQWIAS-----RADEVFIIGGAELFRATMP--IVDRLYVTKIFASFPGDTFYPPISDDEWEIVSYT 141 (164)
T ss_dssp -CTTCEEECSHHHHHHHHHT-----CCSCEEEEECHHHHHHHGG--GCCEEEEEEESSCCCCSEECCCCCTTTEEEEEEE
T ss_pred -CCCeEEECCHHHHHHHHhc-----CCCeEEEECcHHHHHHHHH--hCCEEEEEEeccccCCcEECCCCChhHcEEEEEE
Confidence 3578888899999999985 2578999999999999994 8999999999999999999999987889987653
Q ss_pred c--CceeCcccEEEEEEEEc
Q 024737 241 Q--PLVENNIQFSFVTYVRV 258 (263)
Q Consensus 241 ~--~~~en~~~~~f~~Y~r~ 258 (263)
. ..++++++|.|.+|+|+
T Consensus 142 ~~~~~~~~~~~~~~~~Y~r~ 161 (164)
T 1zdr_A 142 PGGKDEKNPYEHAFIIYERK 161 (164)
T ss_dssp ECCCSSSSCSCEEEEEEEEC
T ss_pred ecccccCCCceEEEEEEEEc
Confidence 2 23457789999999997
No 15
>2w9h_A DHFR, dihydrofolate reductase; oxidoreductase, one-carbon metabolism; HET: TOP; 1.48A {Staphylococcus aureus} PDB: 2w9g_A* 3sqy_X* 3srq_X* 3srr_X* 3srs_X* 3sru_X* 3srw_X* 3frd_X* 3fre_X* 3frf_X* 3fyv_X* 3fyw_X* 3sr5_X* 3frb_X* 3fra_X* 3fy8_X* 3fy9_X* 3fq0_A* 3f0b_X* 3f0s_X* ...
Probab=100.00 E-value=2.6e-41 Score=284.50 Aligned_cols=156 Identities=38% Similarity=0.611 Sum_probs=137.4
Q ss_pred cEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCCC
Q 024737 80 PYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNI 159 (263)
Q Consensus 80 kIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~~ 159 (263)
++++++|+|+||+||.+|+|||++|+|+++|+++|. ++++||||||||+++ ||+|+|+|||+||++...
T Consensus 2 ~i~~~~A~s~dG~Ig~~g~lpW~~~~d~~~f~~~t~-------~~~viMGRkTyes~~---~pl~~r~~iV~S~~~~~~- 70 (159)
T 2w9h_A 2 TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLST-------GHTLVMGRKTFESIG---KPLPNRRNVVLTSDTSFN- 70 (159)
T ss_dssp CEEEEEEECTTCEEEBTTBCSSCCHHHHHHHHHHHT-------TSEEEEEHHHHHHHC---SCCTTSEEEEECSCTTCC-
T ss_pred EEEEEEEECCCCeEcCCCccCccchHHHHHHHHHhc-------CCEEEECCChhhccc---ccCCCCEEEEEcCCCCcC-
Confidence 699999999999999999999999999999999998 599999999999997 799999999999997542
Q ss_pred CCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCCCCccCceEeee
Q 024737 160 ASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRYS 239 (263)
Q Consensus 160 ~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~~~~ 239 (263)
.+++.++++++++++. +++|||+||+++|+++| ++|||++||++|..++||+|||.++...|+++..
T Consensus 71 --~~~~~~~~~~~~~l~~---------~~~i~viGG~~l~~~~l--~lvDel~lt~ip~~~~Gd~~Fp~~~~~~~~l~~~ 137 (159)
T 2w9h_A 71 --VEGVDVIHSIEDIYQL---------PGHVFIFGGQTLFEEMI--DKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASS 137 (159)
T ss_dssp --CTTCEEECSGGGGGGS---------CSCEEEEECHHHHHHHT--TTCSEEEEEEECSCCCCSEECCCCCTTTEEEEEE
T ss_pred --CCCeEEECCHHHHHhc---------CCcEEEEChHHHHHHHH--HhCCEEEEEEecccccCCeeCCCCChhHcEEEEE
Confidence 3578888899998864 36899999999999999 5999999999999999999999998778998765
Q ss_pred cc--CceeCcccEEEEEEEEcC
Q 024737 240 SQ--PLVENNIQFSFVTYVRVG 259 (263)
Q Consensus 240 ~~--~~~en~~~~~f~~Y~r~~ 259 (263)
+. .+++++++|.|.+|+|++
T Consensus 138 ~~~~~~~~~~~~~~~~~Y~r~~ 159 (159)
T 2w9h_A 138 VEGKLDEKNTIPHTFLHLIRKK 159 (159)
T ss_dssp EECCCBTTBCSCEEEEEEEEC-
T ss_pred EeccccccCCccEEEEEEEECC
Confidence 32 234577899999999963
No 16
>3qg2_A Bifunctional dihydrofolate reductase-thymidylate; pyrimethamine, antifolate resistance, oxidoreductase, transferase; HET: CP6 NDP UMP; 2.30A {Plasmodium falciparum} PDB: 3jsu_A* 4dp3_A* 4dph_A* 3qgt_A* 3um8_A* 4dpd_A* 3um5_A* 3um6_A*
Probab=100.00 E-value=3.1e-42 Score=340.51 Aligned_cols=178 Identities=30% Similarity=0.515 Sum_probs=157.9
Q ss_pred CCcEEEEEEEeCCCeeecCCCCCC-CChhhHHHHHHHhhCC----------------------------CCCCCCCEEEE
Q 024737 78 RRPYQVVVAATHDMGIGKDGKLPW-NLPSDLKFFKQLTMST----------------------------SDPGKRNAVVM 128 (263)
Q Consensus 78 ~rkIilivAvS~dG~IG~~G~LpW-~~~eD~~~F~~~T~~~----------------------------~~~~~~~avIM 128 (263)
.+++.+|+|++.||+||.+|+||| |+|+||+||+++|+++ .+|++.++|||
T Consensus 25 ~~~i~lIvA~~~n~gIG~~g~LPW~~Lp~Dlk~Fk~~T~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~VIM 104 (608)
T 3qg2_A 25 EGKKNEVFNNYTFRGLGNKGVLPWKCISLDMKYFRAVTTYVNESKYEKLKYKRCKYLNKETVDNVNDMPNSKKLQNVVVM 104 (608)
T ss_dssp CSCCCCCCCGGGEEEEEBTTBCSSSCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTCCC----------CCCCEEEEE
T ss_pred CceEEEEEEeCCCCccccCCcCCCCCCHHHHHHHHHHhcCCCccccccccccccchhhcccccCccccccccCcCCEEEE
Confidence 558999999999999999999999 8999999999999832 24677899999
Q ss_pred cchhhhhccCCCCCCCCCcEEEEcCCCCCCCCCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCc
Q 024737 129 GRKTWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPEC 208 (263)
Q Consensus 129 GRkTyeslp~~~~plp~r~nIVlSrt~~~~~~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lv 208 (263)
|||||||+|..++|||+|+||||||+..... ..+++.+++|+++|++.+++. +.++||||||++||+++|++++|
T Consensus 105 GRKTfESIp~~frPLPgR~NIVLSR~~~~~~-~~~gv~V~~sleeal~~lk~~----~~~~IfVIGGa~IY~~~L~~~la 179 (608)
T 3qg2_A 105 GRTNWESIPKKFKPLSNRINVILSRTLKKED-FDEDVYIINKVEDLIVLLGKL----NYYKCFILGGSVVYQEFLEKKLI 179 (608)
T ss_dssp EHHHHHHSCGGGCSCTTEEEEEECSSCCGGG-CCSSCEEESSHHHHHHHHHHS----CCSCEEECCCHHHHHHHHHTTCC
T ss_pred chHHHHhhccccCCCCCCeEEEECCCCcccc-CCCCEEEECCHHHHHHHHhcC----CCCeEEEECCHHHHHHHcccCCC
Confidence 9999999986558999999999999964311 135788999999999999875 56899999999999999999999
Q ss_pred CEEEEEEECCccCCceecCCCCccCceEeeeccCceeCcccEEEEEEEEcCC
Q 024737 209 DAIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVENNIQFSFVTYVRVGN 260 (263)
Q Consensus 209 Del~LT~I~~~leGD~fFP~~d~~~f~~~~~~~~~~en~~~~~f~~Y~r~~~ 260 (263)
|+++||+|+..++||+|||+++.+.|+++..+..+.++++.|+|++|+|+++
T Consensus 180 DeL~LT~I~~~~eGDtfFP~id~~~w~~~~~~~~~~~~~~~y~F~~y~R~~~ 231 (608)
T 3qg2_A 180 KKIYFTRINSTYECDVFFPEINENEYQIISVSDVYTSNNTTLDFIIYKKTNN 231 (608)
T ss_dssp SEEEEEEEEEEECCSEECCCCCTTTEEEEEECCCEEETTEEEEEEEEEECCC
T ss_pred CEEEEEEeCCccCCCccCCCCChHHcEEEEEeeeeccCCCceEEEEEEECCC
Confidence 9999999999999999999999999999987777778999999999999854
No 17
>1vdr_A DHFR, dihydrofolate reductase; oxidoreductase, halophilic enzyme; 2.55A {Haloferax volcanii} SCOP: c.71.1.1 PDB: 2ith_A 2jyb_A
Probab=100.00 E-value=5.6e-41 Score=282.52 Aligned_cols=157 Identities=27% Similarity=0.489 Sum_probs=138.5
Q ss_pred cEEEEEEEeCCCeeecCCCCCC-CChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCC
Q 024737 80 PYQVVVAATHDMGIGKDGKLPW-NLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFN 158 (263)
Q Consensus 80 kIilivAvS~dG~IG~~G~LpW-~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~ 158 (263)
||++++|+|+||+||.+|+||| ++|+|++||+++|. ++++||||||||+++ ||+|+|+|||+||++...
T Consensus 2 ~i~~~~A~s~dG~Ig~~g~l~W~~~~~d~~~f~~~t~-------~~~vimGRkTyes~~---~pl~~r~~iV~S~~~~~~ 71 (162)
T 1vdr_A 2 ELVSVAALAENRVIGRDGELPWPSIPADKKQYRSRIA-------DDPVVLGRTTFESMR---DDLPGSAQIVMSRSERSF 71 (162)
T ss_dssp CEEEEEEEEETSEEEBTTBCSSCCCHHHHHHHHHHTS-------SSCEEEEHHHHHHTT---TSCCSSSEEEECSSCCCC
T ss_pred EEEEEEEEcCCCcEECCCCccccCChHHHHHHHHhhC-------CCEEEEcchHHhhCC---ccCCcCeEEEEcCCCccc
Confidence 6999999999999999999999 99999999999987 599999999999997 799999999999997511
Q ss_pred CCCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCccCCceecCCCCccCceEee
Q 024737 159 IASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSIECDTFIPAIDLSLFQQRY 238 (263)
Q Consensus 159 ~~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~leGD~fFP~~d~~~f~~~~ 238 (263)
..+++.+++|++++++.+++. ++++|||+||+++|+++|+ +|||++||++|..++||+|||.++...|+++.
T Consensus 72 --~~~~~~~~~~~~~~l~~l~~~----~~~~i~viGG~~l~~~~l~--lvDel~lt~ip~~~~G~~~Fp~~~~~~~~l~~ 143 (162)
T 1vdr_A 72 --SVDTAHRAASVEEAVDIAASL----DAETAYVIGGAAIYALFQP--HLDRMVLSRVPGEYEGDTYYPEWDAAEWELDA 143 (162)
T ss_dssp --CSSSCCEESSHHHHHHHHHHT----TCSCEEEEECHHHHHHHGG--GCSEEEEEEEEEECCCSEECCCCCTTTEEEEE
T ss_pred --CCCCEEEECCHHHHHHHHHhC----CCCcEEEECCHHHHHHHHH--hCCEEEEEEEccccccCEECCCCCchHCEEEE
Confidence 245777778999999999875 6789999999999999995 89999999999999999999999877898865
Q ss_pred eccCceeCcccEEEEEEEEcC
Q 024737 239 SSQPLVENNIQFSFVTYVRVG 259 (263)
Q Consensus 239 ~~~~~~en~~~~~f~~Y~r~~ 259 (263)
.+ ...+|.|.+|+|+.
T Consensus 144 ~~-----~~~~~~~~~Y~~~~ 159 (162)
T 1vdr_A 144 ET-----DHEGFTLQEWVRSA 159 (162)
T ss_dssp EE-----ECSSCEEEEEEEC-
T ss_pred Ee-----cCCCEEEEEEEECC
Confidence 43 11279999999974
No 18
>3hj3_A Chain A, crystal structure of DHFR; TS, enzyme, crossover, non-active site, oxidoreductase; HET: UMP CB3 MTX NDP; 2.70A {Cryptosporidium hominis} PDB: 1qzf_A* 1sej_A* 3dl5_A* 3dl6_A* 2oip_A*
Probab=100.00 E-value=2.5e-41 Score=330.68 Aligned_cols=173 Identities=39% Similarity=0.657 Sum_probs=156.3
Q ss_pred CCcEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCC
Q 024737 78 RRPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSF 157 (263)
Q Consensus 78 ~rkIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~ 157 (263)
||+|++|+|+|+||+||.+|+|||++|+|++||+++|++..+|++.++|||||||||+++ .||||+|+|||+||++..
T Consensus 4 MrkI~lIvA~SldG~IG~dg~LpW~lpeDl~~Fk~~T~g~~~~~k~daVIMGRKTyEsig--~~PLp~R~nIVlSrt~~~ 81 (521)
T 3hj3_A 4 KNVSIVVAASVLSSGIGINGQLPWSISEDLKFFSKITNNKCDSNKKNALIMGRKTWDSIG--RRPLKNRIIVVISSSLPQ 81 (521)
T ss_dssp CCEEEEEEEETTTCEEEBTTBCSCCCHHHHHHHHHHHHCCSSTTSEEEEEEEHHHHGGGT--TCCCTTSEEEEECSSSCC
T ss_pred CceEEEEEEECCCCcEECCCCCCCCCHHHHHHHHHHHcCCCccccCCEEEEcccHHhhcC--cccCCCCeEEEEcCCCcc
Confidence 899999999999999999999999999999999999998667788899999999999995 489999999999999754
Q ss_pred CCCCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECC-ccCCceecCCCCccCceE
Q 024737 158 NIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIET-SIECDTFIPAIDLSLFQQ 236 (263)
Q Consensus 158 ~~~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~-~leGD~fFP~~d~~~f~~ 236 (263)
.. ..+++.+++|+++|++.+++.+ +.++|||+||++||+++|++++||+++||+||. .++||+|||+++.+ |++
T Consensus 82 ~~-~~~~~~V~~sl~eal~~lk~~~---g~~~I~VIGGa~ly~~~L~~~liDel~LT~Ipv~~~~GDtfFP~~d~~-w~l 156 (521)
T 3hj3_A 82 DE-ADPNVVVFRNLEDSIENLMNDD---SIENIFVCGGESIYRDALKDNFVDRIYLTRVALEDIEFDTYFPEIPET-FLP 156 (521)
T ss_dssp CC-SCSSEEEESSTTTTTTSSSSCT---TEEEEEEEECHHHHHHHHHTTCCSEEEEEEECCCSSCCSEECCCCCTT-EEE
T ss_pred cC-CCCCEEEECCHHHHHHHHhhcc---CCCCEEEEeCHHHHHHHhcCCCCCEEEEEEEeccCcCcCccCCCCCCC-cEE
Confidence 21 2356789999999999998751 347999999999999999999999999999999 78999999999987 999
Q ss_pred eeeccCceeCcccEEEEEEEE
Q 024737 237 RYSSQPLVENNIQFSFVTYVR 257 (263)
Q Consensus 237 ~~~~~~~~en~~~~~f~~Y~r 257 (263)
+.+++.++++++.|+|++|+|
T Consensus 157 v~~~~~~~~~~~~y~F~~y~R 177 (521)
T 3hj3_A 157 VYMSQTFCTKNISYDFMIFEK 177 (521)
T ss_dssp EEECCCEEETTEEECCEEEEE
T ss_pred EEeecccccCCCceEEEEEEe
Confidence 887766778999999999999
No 19
>1j3k_A Bifunctional dihydrofolate reductase-thymidylate synthase; oxidoreductase, transferase; HET: WRA NDP UMP; 2.10A {Plasmodium falciparum} SCOP: c.71.1.1 PDB: 3dg8_A* 1j3j_A* 1j3i_A* 3dga_A*
Probab=100.00 E-value=1.1e-41 Score=311.47 Aligned_cols=176 Identities=30% Similarity=0.517 Sum_probs=150.6
Q ss_pred CcEEEEEEEeCCCeeecCCCCCC-CChhhHHHHHHHhhCCCC----------------------------CCCCCEEEEc
Q 024737 79 RPYQVVVAATHDMGIGKDGKLPW-NLPSDLKFFKQLTMSTSD----------------------------PGKRNAVVMG 129 (263)
Q Consensus 79 rkIilivAvS~dG~IG~~G~LpW-~~~eD~~~F~~~T~~~~~----------------------------~~~~~avIMG 129 (263)
.|+.+|+|++.||+||.+|+||| |+|+||+||+++|+++.+ ++.+++||||
T Consensus 26 ~~~~~i~a~~~n~~IG~~g~LPW~~lp~Dmk~Fk~~T~~~~~~~dg~ldWL~~~~~~~~~~~d~gy~~f~~~ig~~VIMG 105 (280)
T 1j3k_A 26 GKKNEVFNNYTFRGLGNKGVLPWKCISLDMKYFRAVTTYVNESKYEKLKYKRCKYLNKETVDNVNDMPNSKKLQNVVVMG 105 (280)
T ss_dssp CGGGCCCCGGGEEEEEBTTBCSSSCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTCCC----------CCCCCEEEEE
T ss_pred ccEEEEEEecCCceeccCCcCCCcCCHHHHHHHHHHhcCCCccccCcccccccccccccccccccchhhccccCCEEEEc
Confidence 35778899999999999999999 999999999999984211 1125999999
Q ss_pred chhhhhccCCCCCCCCCcEEEEcCCCCCCCCCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcC
Q 024737 130 RKTWESISPLYRPLPGRLNVVLTHSGSFNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECD 209 (263)
Q Consensus 130 RkTyeslp~~~~plp~r~nIVlSrt~~~~~~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvD 209 (263)
|||||++|..+||||+|+|||+||++.... ..+++.+++|+++|++.|++. ++++|||+||++||+++|++++||
T Consensus 106 RkTyEsip~~~~PLp~R~nIVlSr~~~~~~-~~~~v~vv~sl~eal~~lk~~----~~~~I~ViGGa~ly~~~L~~glvD 180 (280)
T 1j3k_A 106 RTNWESIPKKFKPLSNRINVILSRTLKKED-FDEDVYIINKVEDLIVLLGKL----NYYKCFILGGSVVYQEFLEKKLIK 180 (280)
T ss_dssp HHHHHHSCGGGCSCTTSEEEEECSSCCGGG-CCSSCEEESSHHHHHHHHHHS----CCSCEEECCCHHHHHHHHHTTCCS
T ss_pred chHhhhhcccccCcCCCeEEEEeCCCcccc-CCCCEEEECCHHHHHHHHHhC----CCCcEEEECCHHHHHHHhcCccCC
Confidence 999999974457999999999999964311 246788888999999999875 578999999999999999999999
Q ss_pred EEEEEEECCccCCceecCCCCccCceEeeeccCceeCcccEEEEEEEEcC
Q 024737 210 AIHITKIETSIECDTFIPAIDLSLFQQRYSSQPLVENNIQFSFVTYVRVG 259 (263)
Q Consensus 210 el~LT~I~~~leGD~fFP~~d~~~f~~~~~~~~~~en~~~~~f~~Y~r~~ 259 (263)
+++||+||..++||+|||.++...|+++..+....++++.|.|.+|+|++
T Consensus 181 el~LT~Ip~~lgGD~~FP~~d~~~~~lv~~~~~~~~~g~~~~f~~Y~R~~ 230 (280)
T 1j3k_A 181 KIYFTRINSTYECDVFFPEINENEYQIISVSDVYTSNNTTLDFIIYKKTN 230 (280)
T ss_dssp EEEEEEEEEEECCSEECCCCCTTTEEEEEECCCEEETTEEEEEEEEEECC
T ss_pred EEEEEEeccccCCceeCCCCChhhcEEEEEEeeccCCCceEEEEEEEECC
Confidence 99999999999999999999888899887654345688889999999974
No 20
>1df7_A DHFR, dihydrofolate reductase; structure-based inhibitor design, folateanalogs, rossmann fold; HET: NDP MTX; 1.70A {Mycobacterium tuberculosis} SCOP: c.71.1.1 PDB: 1dg5_A* 1dg7_A* 1dg8_A* 2cig_A*
Probab=100.00 E-value=7.8e-41 Score=282.30 Aligned_cols=154 Identities=31% Similarity=0.631 Sum_probs=135.5
Q ss_pred EEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCCCC
Q 024737 81 YQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFNIA 160 (263)
Q Consensus 81 IilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~~~ 160 (263)
|++++|+|+||+||.+|+|||++|+|+++|+++|.+ +++||||||||+++...||+|+|+|||+||++...
T Consensus 2 i~~i~A~s~dG~Ig~~g~lpW~~~~d~~~f~~~t~~-------~~viMGRkTyes~~~~~~pl~~r~~iVlS~~~~~~-- 72 (159)
T 1df7_A 2 VGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMG-------HTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFM-- 72 (159)
T ss_dssp EEEEEEEETTSEEEBTTBCSSCCHHHHHHHHHHHTT-------SEEEEEHHHHHHSCGGGSSCTTSEEEEECSSTTCC--
T ss_pred EEEEEEECCCCcEeCCCCcCCCChHHHHHHHHHHCC-------CEEEEeChHHhhcccccCCCCcCEEEEEeCCCCcC--
Confidence 899999999999999999999999999999999984 89999999999998545799999999999996532
Q ss_pred CCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCcc---CCceecCCCCccCceEe
Q 024737 161 SLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSI---ECDTFIPAIDLSLFQQR 237 (263)
Q Consensus 161 ~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~l---eGD~fFP~~d~~~f~~~ 237 (263)
.+++.+++|++++++ +++|||+||+++|+++|+ +|||++||++|..+ +||+|||.++.+ | ++
T Consensus 73 -~~~~~~~~~~~~~l~----------~~~i~viGG~~l~~~~l~--lvDel~lt~ip~~~G~~~Gd~~Fp~~~~~-~-~~ 137 (159)
T 1df7_A 73 -ASGAEVVGSLEEALT----------SPETWVIGGGQVYALALP--YATRCEVTEVDIGLPREAGDALAPVLDET-W-RG 137 (159)
T ss_dssp -CTTSEEESSHHHHTT----------SSSEEECCCHHHHHHHGG--GCSEEEEEEECCCCCCCTTCEECCCCCTT-C-EE
T ss_pred -CCCEEEECCHHHHhc----------CCcEEEECcHHHHHHHHH--HCCEEEEEEEeeecCCCCccEeCCCCCcc-c-EE
Confidence 457888889999886 268999999999999995 99999999999999 899999999876 9 76
Q ss_pred eecc-CceeCcccEEEEEEEEc
Q 024737 238 YSSQ-PLVENNIQFSFVTYVRV 258 (263)
Q Consensus 238 ~~~~-~~~en~~~~~f~~Y~r~ 258 (263)
..+. .++++++.|+|.+|+|+
T Consensus 138 ~~~~~~~~~~~~~~~f~~y~r~ 159 (159)
T 1df7_A 138 ETGEWRFSRSGLRYRLYSYHRS 159 (159)
T ss_dssp EECCCEECTTSCEEEEEEEECC
T ss_pred eeccccccCCCCcEEEEEEEeC
Confidence 5433 34566699999999985
No 21
>1aoe_A DHFR, dihydrofolate reductase; oxidoreductase, antifungal target; HET: NDP GW3; 1.60A {Candida albicans} SCOP: c.71.1.1 PDB: 1ai9_A* 1ia1_A* 1ia2_A* 1ia3_A* 1ia4_A* 1m78_A* 1m79_A* 1m7a_A* 3qlr_A* 3qls_A* 3qlw_A*
Probab=100.00 E-value=1.3e-40 Score=288.32 Aligned_cols=173 Identities=38% Similarity=0.668 Sum_probs=145.4
Q ss_pred CCcEEEEEEEeCCCe-eecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCC
Q 024737 78 RRPYQVVVAATHDMG-IGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGS 156 (263)
Q Consensus 78 ~rkIilivAvS~dG~-IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~ 156 (263)
.++|++++|+|+||+ ||.+|+|||++++|++||+++|++..++++.+++||||||||+++...+|||+|+|||+||++.
T Consensus 3 ~~~i~~i~A~sldg~iig~~g~lpW~~~~d~~~f~~~t~~~~~~~~~~~viMGRkTyes~~~~~~pl~~r~~iVlS~~~~ 82 (192)
T 1aoe_A 3 KPNVAIIVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWESIPQKFRPLPDRLNIILSRSYE 82 (192)
T ss_dssp SCCEEEEEEEETTTTEEEBTTBCSCCCHHHHHHHHHHHHCCSSTTCEEEEEEEHHHHHHSCGGGCSCTTSEEEEECTTCC
T ss_pred CCEEEEEEEEcCCCCeECCCCCCCCCChhHHHHHHHHhcCCCcccCCCEEEECchHhhcccccccCCCCCeEEEEcCCCc
Confidence 467999999997764 5999999999999999999999864445567999999999999975446999999999999864
Q ss_pred CCCCCCCCeEEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCc----cCCceecCCCCcc
Q 024737 157 FNIASLENVEICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETS----IECDTFIPAIDLS 232 (263)
Q Consensus 157 ~~~~~~~~v~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~----leGD~fFP~~d~~ 232 (263)
... ..+++.+++|++++++. ++ +.++|||+||+++|+++|++++||+++||+||.. ++||+|||. +..
T Consensus 83 ~~~-~~~~~~v~~~~~~al~~-~~-----~~~~i~ViGG~~l~~~~l~~~lvDel~lt~ip~~lG~G~~gd~~fp~-~~~ 154 (192)
T 1aoe_A 83 NEI-IDDNIIHASSIESSLNL-VS-----DVERVFIIGGAEIYNELINNSLVSHLLITEIEHPSPESIEMDTFLKF-PLE 154 (192)
T ss_dssp CEE-EETTEEEESSHHHHHHT-CC-----SEEEEEECCCHHHHHHHTTSTTEEEEEEEEEECSCGGGSCCCEECCC-CGG
T ss_pred ccc-CCCCEEEECCHHHHHHh-hc-----CCCeEEEEcCHHHHHHHhcCCCCCEEEEEEEEcccCCCCccceECCC-ChH
Confidence 211 13568889999999987 43 5689999999999999999999999999999999 789999995 457
Q ss_pred CceEeeec------------cCceeCcccEEEEEEEEc
Q 024737 233 LFQQRYSS------------QPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 233 ~f~~~~~~------------~~~~en~~~~~f~~Y~r~ 258 (263)
.|+++..+ ..+++|++.|+|++|+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~f~~y~r~ 192 (192)
T 1aoe_A 155 SWTKQPKSELQKFVGDTVLEDDIKEGDFTYNYTLWTRK 192 (192)
T ss_dssp GEEECCHHHHHHHHTTCCCCSSEEETTEEEEEEEEEEC
T ss_pred HcEEEeeeccccccccccccccccCCCeeEEEEEEEEC
Confidence 79876432 245678899999999985
No 22
>3cse_A Dihydrofolate reductase; protein-ligand complex, oxidoreductase; HET: NAP N22; 1.60A {Candida glabrata} PDB: 3eej_A* 3eek_A* 3eel_A* 3eem_A* 3qlx_A* 3qly_A* 3qlz_A*
Probab=100.00 E-value=3.4e-40 Score=293.45 Aligned_cols=178 Identities=37% Similarity=0.568 Sum_probs=147.2
Q ss_pred CcEEEEEEEeCCCe-eecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCC
Q 024737 79 RPYQVVVAATHDMG-IGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSF 157 (263)
Q Consensus 79 rkIilivAvS~dG~-IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~ 157 (263)
++|++|+|+|+||+ ||.+|+|||++++|+++|+++|++..++++.++|||||||||+++...+|||+|+|||+||+...
T Consensus 4 ~~i~livA~Sldg~iiG~~g~lpW~l~~D~~~F~~~t~~~~~~~~~~avIMGRkTyesi~~~wrPlp~r~~iVlSr~~~~ 83 (227)
T 3cse_A 4 VPVVGIVAALLPEMGIGFQGNLPWRLAKEMKYFREVTTLTNDNSKQNVVIMGRKTWESIPQKFRPLPKRINVVVSRSFDG 83 (227)
T ss_dssp CCEEEEEEEETTTTEEEBTTBCSCCCHHHHHHHHHHHHCCSSTTCEEEEEEEHHHHHHSCGGGCSCTTSEEEEECTTSSS
T ss_pred cEEEEEEEEcCCCCEECCCCCcCCCChHHHHHHHHHHccCCcccccCEEEECchhhhcccccccCCCcCeEEEEeCCCcc
Confidence 57999999997775 59999999999999999999998766667789999999999999754359999999999999643
Q ss_pred CCC-CCCCeEEeCCHHHHHHHhcCCC-CCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCc----cC-CceecC-CC
Q 024737 158 NIA-SLENVEICRSIHLALELLAEPP-YCSSIEKVFVIGGGQILREALNAPECDAIHITKIETS----IE-CDTFIP-AI 229 (263)
Q Consensus 158 ~~~-~~~~v~v~~sieeai~~l~~~~-~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~----le-GD~fFP-~~ 229 (263)
... ..+++.+++|+++|++.|++.+ ...+.++|||+||++||+++| ++||+++||+||.. ++ ||+||| .+
T Consensus 84 ~~~~~~~~~~v~~sl~~al~~lk~~~~~~~~~~~I~ViGG~~ly~~~L--~lvDel~lT~ip~~lG~G~~~gD~~Fp~~~ 161 (227)
T 3cse_A 84 ELRKVEDGIYHSNSLRNCLTALQSSLANENKIERIYIIGGGEIYRQSM--DLADHWLITKIMPLPETTIPQMDTFLQKQE 161 (227)
T ss_dssp SCEEEETTEEEESCHHHHHHHHTCHHHHTTCEEEEEECCCHHHHHHHT--TTCSEEEEEEEEECTTSCCCCCSEECCHHH
T ss_pred ccccCCCCEEEeCCHHHHHHHHHhhhcccCCCCeEEEEcCHHHHHHHH--HhCCEEEEEEEEccccCCCccccccCCCCC
Confidence 210 1245788999999999998620 001458999999999999999 99999999999999 66 999999 67
Q ss_pred CccCceEeeec--------------c--------------CceeCcccEEEEEEEEcC
Q 024737 230 DLSLFQQRYSS--------------Q--------------PLVENNIQFSFVTYVRVG 259 (263)
Q Consensus 230 d~~~f~~~~~~--------------~--------------~~~en~~~~~f~~Y~r~~ 259 (263)
+...|++ ..+ + .++|+++.|.|.+|+|+.
T Consensus 162 ~~~~w~l-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~g~~y~f~~~~r~~ 218 (227)
T 3cse_A 162 LEQRFYD-NSDKLVDFLPSSIQLEGRLTSQEWNGELVKGLPVQEKGYQFYFTLYTKKL 218 (227)
T ss_dssp HHHHEEE-CGGGHHHHSCTTCCCSSCCEEEEETTEEEEEEEEEETTEEEEEEEEEECC
T ss_pred ChhhcEe-chhhhhhhcCccccCCccccccccccccccccceeECCEEEEEEEEEEec
Confidence 7677877 321 2 457899999999999973
No 23
>1juv_A DHFR, dihydrofolate reductase; complexed with NADPH, oxidoreductase; HET: NDP; 1.70A {Enterobacteria phage T4} SCOP: c.71.1.1
Probab=100.00 E-value=1.1e-34 Score=251.90 Aligned_cols=131 Identities=27% Similarity=0.412 Sum_probs=110.8
Q ss_pred EEEEEEEeC--------CCeeecCCCCCC-CChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEE
Q 024737 81 YQVVVAATH--------DMGIGKDGKLPW-NLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVL 151 (263)
Q Consensus 81 IilivAvS~--------dG~IG~~G~LpW-~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVl 151 (263)
|++|+|+|+ ||+||.+|+||| ++++|++||+++|+ .++|||||||||++| +|||+|+|||+
T Consensus 2 i~li~A~s~~~~~~~~~dg~IG~~g~lpW~~l~~D~~~F~~~t~-------~~~vIMGRkTyesi~---~plp~R~~iVl 71 (193)
T 1juv_A 2 IKLVFRYSPTKTVDGFNELAFGLGDGLPWGRVKKDLQNFKARTE-------GTIMIMGAKTFQSLP---TLLPGRSHIVV 71 (193)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEBTTBCTTCCCHHHHHHHHHHHT-------TSEEEEEHHHHHTCS---SCCTTSCEEEE
T ss_pred EEEEEEEcCccccCCCcCCeECCCCCCCCcCChHHHHHHHHHhc-------CCEEEEchhHhhhcc---cccCCCcEEEE
Confidence 899999999 999999999999 99999999999998 499999999999998 59999999999
Q ss_pred cCCCCCCC--CCCCCe-----------------EEeCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEE
Q 024737 152 THSGSFNI--ASLENV-----------------EICRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIH 212 (263)
Q Consensus 152 Srt~~~~~--~~~~~v-----------------~v~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~ 212 (263)
||++.... ...+++ .+.+|++++++.+++ ++++|||+||+++|+++| ++||+++
T Consensus 72 Sr~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~sl~eal~~lk~-----~~~~I~ViGG~~ly~~~L--~lvDel~ 144 (193)
T 1juv_A 72 CDLARDYPVTKDGDLAHFYITWEQYITYISGGEIQVSSPNAPFETMLD-----QNSKVSVIGGPALLYAAL--PYADEVV 144 (193)
T ss_dssp CCTTSCCCCCTTCCCCSEEECHHHHHHHHTTCCEEEECTTSSCEEEEC-----TTSCEEEEECHHHHHHHG--GGCSEEE
T ss_pred cCCCcccccccccccceeecccccccccccccceecCCHHHHHHHHHc-----CCCcEEEECcHHHHHHHH--HhCCEEE
Confidence 99852110 001112 466777777776664 468999999999999999 7999999
Q ss_pred EEEEC--CccCCceecCC
Q 024737 213 ITKIE--TSIECDTFIPA 228 (263)
Q Consensus 213 LT~I~--~~leGD~fFP~ 228 (263)
||+|| ..++||+|||.
T Consensus 145 lT~ip~~~~~~gd~~F~~ 162 (193)
T 1juv_A 145 VSRIVKRHRVNSTVQLDA 162 (193)
T ss_dssp EEEEEESSCCCCSEEECH
T ss_pred EEEeccccccCCCeecCh
Confidence 99998 45699999993
No 24
>1cz3_A Dihydrofolate reductase; dimer, hyperthermophIle, oxidoreductase; 2.10A {Thermotoga maritima} SCOP: c.71.1.1 PDB: 1d1g_A*
Probab=100.00 E-value=1.2e-32 Score=232.14 Aligned_cols=162 Identities=27% Similarity=0.301 Sum_probs=136.1
Q ss_pred CcEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCCCCCCcEEEEcCCCCCC
Q 024737 79 RPYQVVVAATHDMGIGKDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRPLPGRLNVVLTHSGSFN 158 (263)
Q Consensus 79 rkIilivAvS~dG~IG~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~plp~r~nIVlSrt~~~~ 158 (263)
+|+++++|+|+||+||.+++ ||+.++|+++|.+++.. .+++||||+||++++ ||+++++++|+||++...
T Consensus 1 ~kv~l~~A~slDG~Ia~~~~-~W~~~~~~~~~~~~~~~------~dailmGr~T~~~l~---~p~~~~~~~V~s~~~~~~ 70 (168)
T 1cz3_A 1 AKVIFVLAMDVSGKIASSVE-SWSSFEDRKNFRKITTE------IGNVVMGRITFEEIG---RPLPERLNVVLTRRPKTS 70 (168)
T ss_dssp CEEEEEEEECTTCEEECSCT-TCSCHHHHHHHHHHHHH------HTEEEEEHHHHHHHC---SCCTTSEEEEECSSCCCC
T ss_pred CeEEEEEEEcCCCeEECCCC-CCCChHHHHHHHHHHHh------CCEEEEChHHhhcCC---CCCCCCeEEEECCCCCcc
Confidence 57999999999999998766 99989999999999964 699999999999986 799999999999986411
Q ss_pred CCCCCCeEEeC-CHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCcc-CCceecCCCCc-cCce
Q 024737 159 IASLENVEICR-SIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSI-ECDTFIPAIDL-SLFQ 235 (263)
Q Consensus 159 ~~~~~~v~v~~-sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~l-eGD~fFP~~d~-~~f~ 235 (263)
..+++.++. |++++++.|++. +.++|||+||+++|++||++++|||+++|++|..+ +|+++||.++. ..|+
T Consensus 71 --~~~~~~~~~~~l~~~l~~l~~~----~~~~i~v~GG~~l~~~~l~~~lvDel~l~~~p~~lG~g~~~f~~~~~~~~l~ 144 (168)
T 1cz3_A 71 --NNPSLVFFNGSPADVVKFLEGK----GYERVAVIGGKTVFTEFLREKLVDELFVTVEPYVFGKGIPFFDEFEGYFPLK 144 (168)
T ss_dssp --SCTTEEEECSCHHHHHHHHHHT----TCSEEEEEECHHHHHHHHHTTCCSEEEEEECSEEESSCEESSCCCSCEEEEE
T ss_pred --CCCCEEEEeCCHHHHHHHHHhC----CCCEEEEECCHHHHHHHHhCCCCCEEEEEEeceecCCCCcCCCCCCcccccE
Confidence 135777665 999999999875 67899999999999999999999999999999988 69999998763 5687
Q ss_pred EeeeccCceeCc-ccEEEEEEEEcCC
Q 024737 236 QRYSSQPLVENN-IQFSFVTYVRVGN 260 (263)
Q Consensus 236 ~~~~~~~~~en~-~~~~f~~Y~r~~~ 260 (263)
++... .-+ +++.+..|+++++
T Consensus 145 l~~~~----~~~~~~~~~l~Y~~~~~ 166 (168)
T 1cz3_A 145 LLEMR----RLNERGTLFLKYSVEKS 166 (168)
T ss_dssp EEEEE----ECSSSCCEEEEEEEC--
T ss_pred EeeeE----EeCCCCEEEEEEEEccc
Confidence 76432 122 2689999998765
No 25
>3jtw_A Dihydrofolate reductase; YP_805003.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 1.90A {Pediococcus pentosaceus atcc 25745}
Probab=100.00 E-value=2.1e-32 Score=233.40 Aligned_cols=162 Identities=16% Similarity=0.246 Sum_probs=137.0
Q ss_pred CCcEEEEEEEeCCCeee-cCCCCCCCChh-----hHHHHHHHhhCCCCCCCCCEEEEcchhhhhcc----CCCCCCCCCc
Q 024737 78 RRPYQVVVAATHDMGIG-KDGKLPWNLPS-----DLKFFKQLTMSTSDPGKRNAVVMGRKTWESIS----PLYRPLPGRL 147 (263)
Q Consensus 78 ~rkIilivAvS~dG~IG-~~G~LpW~~~e-----D~~~F~~~T~~~~~~~~~~avIMGRkTyeslp----~~~~plp~r~ 147 (263)
|+||++++|+|+||+|| .+|+++|+.++ +.++|.+++.. .+++||||+||++++ ...+|+++++
T Consensus 3 M~kv~l~~A~SlDG~Ia~~~g~~~W~~~~~~~~~~~~~~~~~~~~------~~ailmGr~T~~~~~p~~~~~~~p~~~~~ 76 (178)
T 3jtw_A 3 ARKVILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSK------IDTVIMGRTTYEQVTQKLSPEKYVYADRQ 76 (178)
T ss_dssp CCCEEEEEEEETTCEEECTTSCCHHHHTTCCCCCCCCHHHHHHHH------EEEEEEEHHHHHHHHHHTCSSSCTTTTSE
T ss_pred ceEEEEEEEEecceEEECCCCCcCcccccCCccchhhHHHHHHhc------CCEEEEChHHHhhhhhccCCCCCCCCCCC
Confidence 89999999999999998 79999998764 46888888864 699999999999985 1247999999
Q ss_pred EEEEcCCCCCCCCCCCCeEEe-CCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCcc-CCcee
Q 024737 148 NVVLTHSGSFNIASLENVEIC-RSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSI-ECDTF 225 (263)
Q Consensus 148 nIVlSrt~~~~~~~~~~v~v~-~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~l-eGD~f 225 (263)
+||+||+.... .+++.++ .|++++++.|++. +.++|||+||+++|++||++++|||+++|++|..+ +|+++
T Consensus 77 ~iV~s~~~~~~---~~~~~~~~~~l~~~l~~l~~~----~~~~i~v~GG~~l~~~~l~~~lvDel~l~~~p~~~G~g~~~ 149 (178)
T 3jtw_A 77 TYIVTSHLGED---TDKIKYWKQSPVELVKRIQKE----KGKDVWIVGGAKIIDPLVQANLIDTYILTTVPIFLGSGIRL 149 (178)
T ss_dssp EEEECSSCCCC---CSSEEEECSCHHHHHHHHHTS----SCCEEEEEECHHHHHHHHHTTCCSEEEEEEESCCCCSSEES
T ss_pred EEEEeCCCCCC---CCCEEEEcCCHHHHHHHHHhC----CCCEEEEEChHHHHHHHHHCCCceEEEEEEecEEEcCCCcc
Confidence 99999987542 3577765 4999999999976 68999999999999999999999999999999999 89999
Q ss_pred cCCCCc-cCceEeeeccCceeCcccEEEEEEEE
Q 024737 226 IPAIDL-SLFQQRYSSQPLVENNIQFSFVTYVR 257 (263)
Q Consensus 226 FP~~d~-~~f~~~~~~~~~~en~~~~~f~~Y~r 257 (263)
||.++. ..|+++... .. + +..+..|+|
T Consensus 150 f~~~~~~~~l~l~~~~--~~-~--~~v~l~Y~r 177 (178)
T 3jtw_A 150 FDRLEEQVPVRLIDVY--QK-N--ELVYSIYQR 177 (178)
T ss_dssp SSCCCSCCCEEEEEEE--EE-T--TEEEEEEEE
T ss_pred cCCCCcCcceEEeEEE--EE-C--CEEEEEEEe
Confidence 999763 678876532 12 2 578888876
No 26
>3ky8_A Putative riboflavin biosynthesis protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE UNL; 2.12A {Shewanella loihica}
Probab=99.97 E-value=5.3e-30 Score=222.75 Aligned_cols=167 Identities=20% Similarity=0.185 Sum_probs=132.5
Q ss_pred CCCcEEEEEEEeCCCeee-cCCCCCCCChh-----hHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCC--CCCCCCCcE
Q 024737 77 ARRPYQVVVAATHDMGIG-KDGKLPWNLPS-----DLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPL--YRPLPGRLN 148 (263)
Q Consensus 77 ~~rkIilivAvS~dG~IG-~~G~LpW~~~e-----D~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~--~~plp~r~n 148 (263)
.|++|++++|+|+||+|| .+|++||+.++ |..+|.+.... .+++||||+|||+++.. .||+ ++++
T Consensus 18 ~~p~v~l~~A~SlDG~Ia~~~g~~~W~~~~~~~~~~~~~~~~~~~~------~~ailmGr~T~e~~~~~~~~~P~-~~~~ 90 (197)
T 3ky8_A 18 QGMANIVFIATSLDGYIADKRGKLDWLHSVPNPNNVDTGFVALMER------VDGLVMGRNTLDMVLSFDCDWPY-SKPV 90 (197)
T ss_dssp TTCEEEEEEEEETTSEEECTTSCCGGGGGSCCTTCCCCSHHHHHHH------CSEEEEEHHHHHHHCCTTCCCCC-SSCE
T ss_pred CCCeEEEEEEECCCCceECCCCCcCcCcCCCccchHHHHHHHHHHh------CCEEEEcHHHhHhHhhcCCCCCC-CCcE
Confidence 489999999999999997 79999998654 33445554433 69999999999998742 2677 5699
Q ss_pred EEEcCCCCCCCCC-CCCeEE-eCCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCcc-CCcee
Q 024737 149 VVLTHSGSFNIAS-LENVEI-CRSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSI-ECDTF 225 (263)
Q Consensus 149 IVlSrt~~~~~~~-~~~v~v-~~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~l-eGD~f 225 (263)
||+||++...... .+++.+ ..|++++++.|++. +.++|||+||+.+ ++||++++|||++++++|..+ +|+++
T Consensus 91 iVls~~~~~~~~~~~~~~~~v~~~l~~~l~~L~~~----~~~~i~v~GG~~l-~~~l~~glvDel~l~~~P~~lG~G~~~ 165 (197)
T 3ky8_A 91 FVLSNTMTEVPQGYEDKVFLVKGKLVDIIADLNAK----GFNELYIDGGVTI-QNFLKEDLIDEMVITRFPILLGGGVPL 165 (197)
T ss_dssp EEECSSCCSCCTTCTTTEEEECSCHHHHHHHHHHT----TCCEEEEESHHHH-HHHHHTTCCCEEEEEEESEECSSSEES
T ss_pred EEEeCCCCCCccccCCCEEEEeCCHHHHHHHHHhC----CCCeEEEEehHHH-HHHHhCCCCCEEEEEEeeEEECCCCcc
Confidence 9999997532111 136765 48999999999875 6789999999999 999999999999999999998 79999
Q ss_pred cCCCC-ccCceEeeeccCceeCcccEEEEEEEEcC
Q 024737 226 IPAID-LSLFQQRYSSQPLVENNIQFSFVTYVRVG 259 (263)
Q Consensus 226 FP~~d-~~~f~~~~~~~~~~en~~~~~f~~Y~r~~ 259 (263)
||.++ ...|+++... .-+.++.+..|++++
T Consensus 166 f~~~~~~~~l~l~~~~----~~~~g~v~l~Y~~~~ 196 (197)
T 3ky8_A 166 FGELESSLSFNVIKSE----VVLDSLTQTTYHRKR 196 (197)
T ss_dssp CCCCSSCEEEEEEEEE----EETTTEEEEEEEECC
T ss_pred cCCCCcCcceEEEEEE----EeCCCEEEEEEEEcc
Confidence 99876 4568776432 122368899999864
No 27
>2xw7_A Dihydrofolate reductase; oxidoreductase, NADPH; HET: PG4 NDP; 2.00A {Mycobacterium smegmatis}
Probab=99.96 E-value=2.4e-29 Score=213.35 Aligned_cols=164 Identities=16% Similarity=0.160 Sum_probs=130.6
Q ss_pred CCcEEEEEEEeCCCeee-cCCCCCCCChh---h--HHHHHHHhhCCCCCCCCCEEEEcchhhhhccC-CCCCCCCCcEEE
Q 024737 78 RRPYQVVVAATHDMGIG-KDGKLPWNLPS---D--LKFFKQLTMSTSDPGKRNAVVMGRKTWESISP-LYRPLPGRLNVV 150 (263)
Q Consensus 78 ~rkIilivAvS~dG~IG-~~G~LpW~~~e---D--~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~-~~~plp~r~nIV 150 (263)
|+++++++|+|+||+|| .+|++||+.++ + +++|.+++.. .+++||||+||+++.. ..||+ ++++||
T Consensus 3 mp~v~~~~A~SlDG~Ia~~~g~~~W~~~~~~~~~~~~~~~~~~~~------~dailmGr~T~~~~~~~~~~P~-~~~~iV 75 (178)
T 2xw7_A 3 MVKTVYYTASSLDGYIVDENQSLDWLTSRDITPDGPFGYEQFIET------IGVLVMGASTYEWVVEHGDWSY-DQPAWV 75 (178)
T ss_dssp SCCEEEEEEEETTSBSSCTTSCCHHHHTSCCCTTSTTCHHHHHHT------EEEEEEEHHHHHHHHHSSCCCC-SSCEEE
T ss_pred CcEEEEEEEEcccCceECCCCCcccccCCCCcccchhhHHHHHHh------CCEEEECHHHHhhhhcCCCCCC-CCCEEE
Confidence 78999999999999995 79999998652 2 6788888764 7999999999999852 11444 889999
Q ss_pred EcCCCCCCCCCCCCeEEe-CCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCcc-CCceecCC
Q 024737 151 LTHSGSFNIASLENVEIC-RSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSI-ECDTFIPA 228 (263)
Q Consensus 151 lSrt~~~~~~~~~~v~v~-~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~l-eGD~fFP~ 228 (263)
+|++..... ..+++.++ .|++++++.|++.. +.++|||+||+++|++||++++|||++++++|..+ +|+++||.
T Consensus 76 ~s~~~~~~~-~~~~~~~~~~dl~~~l~~L~~~~---~~~~v~v~GG~~l~~~~l~~gLvDel~l~~~P~~lG~g~~~f~~ 151 (178)
T 2xw7_A 76 LTHRPEIAA-ESHPMQVFSGDVAELHPELVAAA---GGKDVWVVGGGDVAAQFVAADLIDEIIVSYAPCTLGVGSRVLPM 151 (178)
T ss_dssp ECSCGGGCB-TTBCCEEECSCHHHHHHHHHHHT---TTSEEEEEECHHHHHHHHHTTCCCEEEEEEESEECSSSSBSSCS
T ss_pred EeCCCCCcC-CCCCEEEECCCHHHHHHHHHhcc---CCCcEEEEccHHHHHHHHHCCCCeEEEEEEeceEecCCCcCCCC
Confidence 999831111 23467655 79999999998751 34899999999999999999999999999999999 79999998
Q ss_pred CCccCceEeeeccCceeCcccEEEEEEEEcC
Q 024737 229 IDLSLFQQRYSSQPLVENNIQFSFVTYVRVG 259 (263)
Q Consensus 229 ~d~~~f~~~~~~~~~~en~~~~~f~~Y~r~~ 259 (263)
.+ .|+++... .. + +..+..|++++
T Consensus 152 ~~--~l~l~~~~--~~-~--~~v~l~y~~~~ 175 (178)
T 2xw7_A 152 RS--EWVLDDCA--RN-G--DFVCARWKRPV 175 (178)
T ss_dssp CE--ECEEEEEE--EE-T--TEEEEEEECCC
T ss_pred CC--ceEEEeEE--Ee-C--CeEEEEEEEcc
Confidence 76 67765432 12 2 58888998764
No 28
>2gd9_A Hypothetical protein YYAP; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=99.95 E-value=4.9e-28 Score=206.88 Aligned_cols=165 Identities=14% Similarity=0.179 Sum_probs=129.7
Q ss_pred CCCCcEEEEEEEeCCCeee-cCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCCCCC----------CC
Q 024737 76 RARRPYQVVVAATHDMGIG-KDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPLYRP----------LP 144 (263)
Q Consensus 76 ~~~rkIilivAvS~dG~IG-~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~~~p----------lp 144 (263)
..|+++++++|+|+||+|| .+|+++|++++|..+|.+++.. .+++||||+||++++.. || +.
T Consensus 6 ~~~p~v~~~~A~SlDG~Ia~~~g~~~W~~~~~~~~~~~~~~~------~dail~Gr~T~~~~~~~-~p~~~Pd~~~~~~~ 78 (189)
T 2gd9_A 6 LKQRRIILDLAVTLDGFIEGKNGEVDWCIMDPDMGFTDFLNQ------IDTILYGRKSFDLWGQY-IPKNEDPDTEKELW 78 (189)
T ss_dssp CCCCCEEEEEEECTTSEEECTTSCCTTCCCCTTSCHHHHHHT------EEEEEEEHHHHHHHTTC-----------CCHH
T ss_pred CCCceEEEEEEEccccceECCCCCcCcccCChHHHHHHHHhc------CCEEEEChHHHhhhhhc-CCCCCCccccchhH
Confidence 4488999999999999997 5999999976655578887654 79999999999998631 33 22
Q ss_pred ----CCcEEEEcCCCCCCCCCCCCeEEe-CCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCc
Q 024737 145 ----GRLNVVLTHSGSFNIASLENVEIC-RSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETS 219 (263)
Q Consensus 145 ----~r~nIVlSrt~~~~~~~~~~v~v~-~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~ 219 (263)
++++||+|++.... . .++.+. .+++++++.|++. +.++|||.||++++++||++++|||++++++|..
T Consensus 79 ~~~~~~~~iV~t~~~~~~--~-~~~~~~~~~l~~~l~~L~~~----~~~~i~v~GG~~l~~~~l~~glvDel~l~~~P~~ 151 (189)
T 2gd9_A 79 KLVHSKKKYVFSRTQNEI--D-NQAIFINDNILEEVNKLKKN----PGKDIWLYGGASLITTFINLGLVDEFRLSIHPVV 151 (189)
T ss_dssp HHHHHSEEEEECCEEETT--T-TEEECCHHHHHHHHHHHHHS----CCSEEEEEECHHHHHHHHHTTCCCEEEEEECSEE
T ss_pred HHhCCCCEEEEeCCCCCC--C-CCeEEEcCCHHHHHHHHHhC----CCCeEEEEChHHHHHHHHHCCCceEEEEEEeCEE
Confidence 78999999985321 1 256654 5899999999876 6789999999999999999999999999999999
Q ss_pred c-CCceecCCCC-ccCceEeeeccCceeCcccEEEEEEEEc
Q 024737 220 I-ECDTFIPAID-LSLFQQRYSSQPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 220 l-eGD~fFP~~d-~~~f~~~~~~~~~~en~~~~~f~~Y~r~ 258 (263)
+ +|+++||.++ ...|+++... .-+.+..+..|+++
T Consensus 152 lG~g~~~f~~~~~~~~l~l~~~~----~~~~~~~~l~y~~~ 188 (189)
T 2gd9_A 152 LGEGKPLFIDVKQRINLKMVNTR----TFSSGVVQIVYHWN 188 (189)
T ss_dssp CSSSEESSCSCCSCEECEEEEEE----ECTTSCEEEEEEC-
T ss_pred eCCCCccCCCCCCCcceEEEEEE----EcCCCEEEEEEEeC
Confidence 8 7999999864 4567765432 12235777788764
No 29
>3kgy_A Bifunctional deaminase-reductase domain protein; putative dihydrofolate reductase, structural genomics; HET: MSE NDP; 1.50A {Chloroflexus aurantiacus j-10-fl}
Probab=99.93 E-value=3.2e-25 Score=197.68 Aligned_cols=169 Identities=18% Similarity=0.202 Sum_probs=121.4
Q ss_pred cCCCCcEEEEEEEeCCCeee-c--CCCCC-------CCChh-hH--------------------------HHHHHHhhCC
Q 024737 75 LRARRPYQVVVAATHDMGIG-K--DGKLP-------WNLPS-DL--------------------------KFFKQLTMST 117 (263)
Q Consensus 75 ~~~~rkIilivAvS~dG~IG-~--~G~Lp-------W~~~e-D~--------------------------~~F~~~T~~~ 117 (263)
...|+|+++.+++|+||+|+ . ++.+- |..+. ++ .+..+...+
T Consensus 17 ~~~m~kl~~~~~vSLDG~~ag~~~~~~~g~~~~~~~w~~~g~~l~~w~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~- 95 (231)
T 3kgy_A 17 FQGMSKVFVNISLSLDGFMAPEGMDMAHFSDPTYKNWGAKWGALMAWALSQQYLREKLKLGTGGETGPVNDMVRHTFER- 95 (231)
T ss_dssp GGGSCCEEEEEEEETTSEEECTTCSGGGTTCTTGGGHHHHHHHHHHHHHTBHHHHHHTTCCSCCBCSHHHHHHHHHHHT-
T ss_pred hcccceEEEEEEEcccccccCCCCcCCCCcccccccccCCcHHHhhhhcccccccccccccccccccccHHHHHHHHhc-
Confidence 35599999999999999995 3 22332 43221 11 122223443
Q ss_pred CCCCCCCEEEEcchhhhhccCC---CCCCCCCcEEEEcCCCCCCCCCCCCe--E-EeCCHHHHHHHhcCCCCCCCCCcEE
Q 024737 118 SDPGKRNAVVMGRKTWESISPL---YRPLPGRLNVVLTHSGSFNIASLENV--E-ICRSIHLALELLAEPPYCSSIEKVF 191 (263)
Q Consensus 118 ~~~~~~~avIMGRkTyeslp~~---~~plp~r~nIVlSrt~~~~~~~~~~v--~-v~~sieeai~~l~~~~~~~~~~~I~ 191 (263)
.+++||||||||+++.. .+|+ +++|||+||++..+....+++ . +.++++++++.|++. .+.++||
T Consensus 96 -----i~~vIMGRkTye~~~~~wp~~~p~-~r~~iVlS~~~~~~~~~~~~~~v~~v~~~l~eal~~l~~~---~~~~~I~ 166 (231)
T 3kgy_A 96 -----TGAHIMGKRMFEGGERGWPEEAPF-HTPVYVLTHERRNPWVRPGGTTFYFVNDGPEQALALAREA---AGERDIR 166 (231)
T ss_dssp -----EEEEEEEHHHHHHHHHHSCSSCSC-CSEEEEECSSCCCCEEETTTEEEEEECSCHHHHHHHHHHH---HTTSEEE
T ss_pred -----CCEEEEChhhhhhhhhhcCCcCcC-CCcEEEEcCCCCCccccCCCcEEEEEcCCHHHHHHHHHhh---cCCCcEE
Confidence 79999999999998521 1233 899999999974321111233 2 558999999999752 1578999
Q ss_pred EEeCHHHHHHHhCCCCcCEEEEEEECCcc-CCceecCCCCc--cCceEeeeccCceeCcccEEEEEEEEc
Q 024737 192 VIGGGQILREALNAPECDAIHITKIETSI-ECDTFIPAIDL--SLFQQRYSSQPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 192 ViGGa~Iy~~~L~~~lvDel~LT~I~~~l-eGD~fFP~~d~--~~f~~~~~~~~~~en~~~~~f~~Y~r~ 258 (263)
|+||+++|++||++++|||++||++|..+ +|+++||.++. ..|++... ...+ ++.++.|+|.
T Consensus 167 V~GG~~l~~~~L~~gLvDel~lti~Pv~lG~G~~lF~~~~~~~~~l~l~~~---~~~~--Gvv~l~Y~r~ 231 (231)
T 3kgy_A 167 ISGGANVIQQYLNLGLVDELEIALIPVIFGGGRRLFENLHEPLPQFRIDRV---LASP--TATHLRYVRL 231 (231)
T ss_dssp EEECHHHHHHHHHTTCCSEEEEEEESCCCSSSEESSCSCCSSCCCEEEEEE---EECS--SCEEEEEEEC
T ss_pred EeCCHHHHHHHHhCCCCCEEEEEEeceeccCCCccCCCCCCccceeEEEEE---EcCC--CEEEEEEEeC
Confidence 99999999999999999999999999998 89999999874 35665421 2233 6888899873
No 30
>2b3z_A Riboflavin biosynthesis protein RIBD; alpha/beta/alpha, deaminase domain and reductase domain, hydrolase, oxidoreductase; 2.41A {Bacillus subtilis} SCOP: c.71.1.2 c.97.1.2 PDB: 2d5n_A* 3ex8_A*
Probab=99.79 E-value=7.9e-19 Score=165.72 Aligned_cols=167 Identities=19% Similarity=0.175 Sum_probs=122.2
Q ss_pred CCCcEEEEEEEeCCCeee-cCCCCCCCC-hhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccC----C-----CCC---
Q 024737 77 ARRPYQVVVAATHDMGIG-KDGKLPWNL-PSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISP----L-----YRP--- 142 (263)
Q Consensus 77 ~~rkIilivAvS~dG~IG-~~G~LpW~~-~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~----~-----~~p--- 142 (263)
.++++++.+|+|+||+|+ .+|+.+|.. +++.++|.++... .+++||||+||+.... . ..|
T Consensus 156 ~rP~V~lk~A~SLDG~Ia~~~G~~~Wit~~~~~~~~~~lr~~------~daILvGr~T~~~d~P~Lt~R~~~g~~~P~rv 229 (373)
T 2b3z_A 156 GLPYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKT------HQSILVGVGTVKADNPSLTCRLPNVTKQPVRV 229 (373)
T ss_dssp SSCEEEEEEEEETTSBSSCTTSCCTTSSCHHHHHHHTTHHHH------SSEEEEEHHHHHHHCCCCCCCSTTCCSCCEEE
T ss_pred cchhheeeeeecCCCceeccCCCccccCCHHHHHHHHHHHHH------CCEEEEChhhhhhcCCcccccCcCCCCCCeEE
Confidence 388999999999999997 789999974 6778888887654 7999999999998521 0 011
Q ss_pred -------CC---------CCcEEEEcCCCCCCC----CCCCCeEEe------CCHHHHHHHhcCCCCCCCCCcEEEEeCH
Q 024737 143 -------LP---------GRLNVVLTHSGSFNI----ASLENVEIC------RSIHLALELLAEPPYCSSIEKVFVIGGG 196 (263)
Q Consensus 143 -------lp---------~r~nIVlSrt~~~~~----~~~~~v~v~------~sieeai~~l~~~~~~~~~~~I~ViGGa 196 (263)
+| ++++||+|++..... -...++.+. .|+.++++.|++. +.++|||.||+
T Consensus 230 Vld~~~~lp~~a~~~~~~~~~~iV~t~~~~~~~~~~~l~~~gv~vi~~~~~~~dl~~~l~~L~~~----g~~~vlveGG~ 305 (373)
T 2b3z_A 230 ILDTVLSIPEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAEE----GIMSVYVEGGS 305 (373)
T ss_dssp EECTTCCCCTTCHHHHSCSSCEEEEECTTSCHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHT----TCCEEEEEECH
T ss_pred EEcCCCCCCCcchhhcCCCCCEEEEEcCCCCHHHHHHHHhCCcEEEEeCCCCCCHHHHHHHHHHC----CCCEEEEEEhH
Confidence 11 578888888742100 012356554 4899999999976 78999999999
Q ss_pred HHHHHHhCCCCcCEEEEEEECCccC---CceecCCC-----C-ccCceEeeeccCceeCcccEEEEEEEEc
Q 024737 197 QILREALNAPECDAIHITKIETSIE---CDTFIPAI-----D-LSLFQQRYSSQPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 197 ~Iy~~~L~~~lvDel~LT~I~~~le---GD~fFP~~-----d-~~~f~~~~~~~~~~en~~~~~f~~Y~r~ 258 (263)
+++++||+++++||++++++|..+. |.++|+.. + ...|++.... ...++ ....|.++
T Consensus 306 ~l~~s~L~agLVDEl~l~iaP~llG~~~g~~lf~~~~~~~~~~~~~l~l~~~~--~~g~d---v~l~y~~~ 371 (373)
T 2b3z_A 306 AVHGSFVKEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDIT--QIGRD---IKLTAKPT 371 (373)
T ss_dssp HHHHHHHHHTCCSEEEEEEESBCCCCSSSCBSSCSSCCSSTTSSCBEEEEEEE--EETTE---EEEEEEEC
T ss_pred HHHHHHHhCCCceEEEEEEcceEecCCCCcCcccccccccccccccceEeEEE--EECCc---EEEEEEEC
Confidence 9999999999999999999999983 67888753 1 2345554322 22332 35667664
No 31
>2azn_A HTP reductase, putative 5-amino-6-(5-phosphoribosylamino)uracil; oxidoreductase; HET: MA5 NAP EPE; 2.70A {Methanocaldococcus jannaschii} SCOP: c.71.1.2
Probab=99.75 E-value=5.2e-17 Score=141.70 Aligned_cols=165 Identities=12% Similarity=0.126 Sum_probs=116.0
Q ss_pred CCcEEEEEEEeCCCeee-cCCCCCCCC-hhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccC---------CCCCC---
Q 024737 78 RRPYQVVVAATHDMGIG-KDGKLPWNL-PSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISP---------LYRPL--- 143 (263)
Q Consensus 78 ~rkIilivAvS~dG~IG-~~G~LpW~~-~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~---------~~~pl--- 143 (263)
++++++.+|+|+||+|+ .+|.. |.. +++..++.++... .+++||||+||+.... ..+|+
T Consensus 3 rP~V~~~~a~SLDG~ia~~~g~~-wit~~~~~~~~~~lr~~------~dailvG~~T~~~d~p~L~~~r~~~~~~P~~vV 75 (219)
T 2azn_A 3 KPYIISNVGMTLDGKLATINNDS-RISCEEDLIRVHKIRAN------VDGIMVGIGTVLKDDPRLTVHKIKSDRNPVRIV 75 (219)
T ss_dssp CCEEEEEEEEETTCBSSCTTCCC-CCCCHHHHHHHHHHHHT------SSEEEEEHHHHHHHCCCCSCCSSCCSSCCEEEE
T ss_pred CCEEEEEEEEcCCCCEecCCCCC-CCCCHHHHHHHHHHHHH------CCEEEEChhehhhcCCcCccccccCCCCCEEEE
Confidence 67899999999999995 68888 964 4555667776654 7999999999996511 11342
Q ss_pred ---------------CCCcEEEEcCCCCCCCC----C---CCCeEEe------CCHHHHHHHhcCCCCCCCCCcEEEEeC
Q 024737 144 ---------------PGRLNVVLTHSGSFNIA----S---LENVEIC------RSIHLALELLAEPPYCSSIEKVFVIGG 195 (263)
Q Consensus 144 ---------------p~r~nIVlSrt~~~~~~----~---~~~v~v~------~sieeai~~l~~~~~~~~~~~I~ViGG 195 (263)
.+.+.+|+|++...... . ..++.+. .++.++++.|++. +.++|||.||
T Consensus 76 ~d~~~~~~~~~~~~~~~~~~~V~t~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~dl~~~l~~L~~~----g~~~ilveGG 151 (219)
T 2azn_A 76 VDSKLRVPLNARVLNKDAKTIIATTEDTNEEKEKKIKILEDMGVEVVKCGRGKVDLKKLMDILYDK----GIKSILLEGG 151 (219)
T ss_dssp ECTTCCCCTTCGGGSTTSCEEEEECSCCCHHHHHHHHHHHHTTCEEEECCSSSCCHHHHHHHHHHT----TCCEEEEEEC
T ss_pred ECCCCCCCccchhhcCCCCEEEEEcCCCCHHHHHHhhhhhcCCeEEEEcCCCCcCHHHHHHHHHHc----CCCEEEEeeC
Confidence 13456777665321000 0 1245443 4899999999986 7899999999
Q ss_pred HHHHHHHhCCCCcCEEEEEEECCccC---CceecCCCC------ccCceEeeeccCceeCcccEEEEEEEEc
Q 024737 196 GQILREALNAPECDAIHITKIETSIE---CDTFIPAID------LSLFQQRYSSQPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 196 a~Iy~~~L~~~lvDel~LT~I~~~le---GD~fFP~~d------~~~f~~~~~~~~~~en~~~~~f~~Y~r~ 258 (263)
+.+..+||+++++||+++++.|..+. |-++|+... ...|++.... ...+ . .+..|.++
T Consensus 152 ~~l~~s~l~~gLvDel~l~iaP~llG~~~~~~lf~~~~~~~~~~~~~l~l~~~~--~~~~--~-v~l~y~~~ 218 (219)
T 2azn_A 152 GTLNWGMFKEGLVDEVSVYIAPKIFGGKEAPTYVDGEGFKTVDECVKLELKNFY--RLGE--G-IVLEFKVK 218 (219)
T ss_dssp HHHHHHHHHTTCCCEEEEEEESCCCCCTTSCBSSCSSCCSSGGGSCCEEEEEEE--EETT--E-EEEEEEEC
T ss_pred HHHHHHHHHCCCCcEEEEEEcCeeecCCCCcCcccCcCccchhhccccEEEEEE--EECC--e-EEEEEEEC
Confidence 99999999999999999999999884 457887532 2345554322 2233 2 56778765
No 32
>2g6v_A Riboflavin biosynthesis protein RIBD; RIBD APO structure, structural genomics, structural proteomi europe, spine, hydrolase, oxidoreductase; 2.60A {Escherichia coli} PDB: 2obc_A* 2o7p_A*
Probab=99.61 E-value=1.1e-14 Score=138.81 Aligned_cols=142 Identities=14% Similarity=0.138 Sum_probs=104.6
Q ss_pred CCCcEEEEEEEeCCCeee-cCCCCCCCC-hhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccC----CC----------
Q 024737 77 ARRPYQVVVAATHDMGIG-KDGKLPWNL-PSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISP----LY---------- 140 (263)
Q Consensus 77 ~~rkIilivAvS~dG~IG-~~G~LpW~~-~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~----~~---------- 140 (263)
.|+++++.+|+|+||+|+ .+|+..|.. +++..++.++... .+++||||+||+.... ..
T Consensus 172 ~rP~V~~k~A~SLDG~IA~~~G~s~Wit~~~~r~~~~~lra~------~DAILvG~~T~~~d~P~Lt~r~~~~~~~~~~~ 245 (402)
T 2g6v_A 172 GFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLLRAQ------SHAILTSSATVLADDPALTVRWSELDEQTQAL 245 (402)
T ss_dssp SSCEEEEEEEECTTCBBCC---CCSCSSCHHHHHHHHHHHHH------CSEEEEEHHHHHHHCCCCCCCGGGCCGGGTSS
T ss_pred ccchheeeeeecCCCCCccCCCCcCCcCCHHHHHHHHHHHHh------CCEEEECHHHHhhcCccccccccccccccccc
Confidence 378899999999999995 688999974 4455566655554 7999999999996510 00
Q ss_pred -------CCC-----------------C-CCcEEEEcCCCCCCCCCCCCeEEe--C------CHHHHHHHhcCCCCCCCC
Q 024737 141 -------RPL-----------------P-GRLNVVLTHSGSFNIASLENVEIC--R------SIHLALELLAEPPYCSSI 187 (263)
Q Consensus 141 -------~pl-----------------p-~r~nIVlSrt~~~~~~~~~~v~v~--~------sieeai~~l~~~~~~~~~ 187 (263)
.|+ . +.+.+|+|++..... -..++.+. + ++.++++.|++. +.
T Consensus 246 ~~~~~~~~P~rvVld~~~~lp~~a~~~~~~~~~iV~t~~~~~~~-l~~gv~vi~~~~~~g~vdl~~~l~~L~~~----g~ 320 (402)
T 2g6v_A 246 YPQQNLRQPIRIVIDSQNRVTPVHRIVQQPGETWFARTQEDSRE-WPETVRTLLIPEHKGHLDLVVLMMQLGKQ----QI 320 (402)
T ss_dssp CCGGGCCCCEEEEECTTCCCCTTSGGGSSSSCEEEEESSCCCSC-CCTTEEEEECCEETTEECHHHHHHHHHHT----TC
T ss_pred ccccccCCCeEEEECCCCCCChhhHhhcCCCCEEEEECCcchhh-hcCCCEEEEecCCCCCCCHHHHHHHHHhC----CC
Confidence 121 1 456788877642111 02356543 3 899999999886 78
Q ss_pred CcEEEEeCHHHHHHHhCCCCcCEEEEEEECCcc-C-CceecCCC
Q 024737 188 EKVFVIGGGQILREALNAPECDAIHITKIETSI-E-CDTFIPAI 229 (263)
Q Consensus 188 ~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~l-e-GD~fFP~~ 229 (263)
++|||.||+.+..+||++||+||+++++.|..+ + |.++|+..
T Consensus 321 ~~vlVEGG~~L~~sfL~agLVDEl~l~iaP~llG~~G~~lf~~~ 364 (402)
T 2g6v_A 321 NSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLP 364 (402)
T ss_dssp CEEEECCCHHHHHHHHHHTCCCEEEEEECSCCCSSSSCBSCCCC
T ss_pred CEEEEEEhHHHHHHHHHCCCccEEEEEEccEEeCCCCcCCCCCc
Confidence 999999999999999999999999999999988 3 77888763
No 33
>2hxv_A Diaminohydroxyphosphoribosylaminopyrimidine deami amino-6-(5-phosphoribosylamino)uracil...; oxidoreductase, structural genomics; HET: NDP; 1.80A {Thermotoga maritima} SCOP: c.71.1.2 c.97.1.2
Probab=99.60 E-value=4.7e-14 Score=132.47 Aligned_cols=165 Identities=18% Similarity=0.147 Sum_probs=114.2
Q ss_pred CCCcEEEEEEEeCCCeee-cCCCCCCCChhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCC---CCCCCCCc-EEEE
Q 024737 77 ARRPYQVVVAATHDMGIG-KDGKLPWNLPSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPL---YRPLPGRL-NVVL 151 (263)
Q Consensus 77 ~~rkIilivAvS~dG~IG-~~G~LpW~~~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~---~~plp~r~-nIVl 151 (263)
.++.+++.+|+|+||+|+ .+|+..|..+++.+++.++... .+++||||+||+..... .++..+.| .||+
T Consensus 158 ~rP~V~lk~A~SLDG~IA~~~G~s~Wit~~~~~~~~~lr~~------~DAILvG~~T~~~d~P~Lt~r~~~g~~P~rvVl 231 (360)
T 2hxv_A 158 KRPFVALKYASTLDGKIADHRGDSKWITDKLRFKVHEMRNI------YSAVLVGAGTVLKDNPQLTCRLKEGRNPVRVIL 231 (360)
T ss_dssp SSCEEEEEEEEETTSEEECTTSCCTTSCSTTHHHHHHHHHH------SSEEEEEHHHHHHHCCCCCCCSTTSCCCEEEEE
T ss_pred chhhheeehhhccCCcccCCCCCcccCCHHHHHHHHHHHHH------CCEEEECccchhhhCCcccccCCCCCCCeEEEE
Confidence 377899999999999996 6888999655556666666554 79999999999864210 11222334 5899
Q ss_pred cCCCCCCCC-----CC-CCeE-Ee-----------------CCHHHHHHHhcCCCCCCCCCcEEEEeCHHHHHHHhCCCC
Q 024737 152 THSGSFNIA-----SL-ENVE-IC-----------------RSIHLALELLAEPPYCSSIEKVFVIGGGQILREALNAPE 207 (263)
Q Consensus 152 Srt~~~~~~-----~~-~~v~-v~-----------------~sieeai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~l 207 (263)
|++...+.. .. .... ++ .++.++++.|++. +.++|||.||+++..+||+++
T Consensus 232 d~~~~~p~~~~~~~~~~~~~iv~t~~~~~~~~~~v~v~~~~~dl~~~l~~L~~~----g~~~vlVeGG~~L~~sfL~ag- 306 (360)
T 2hxv_A 232 DRKGVLSGKVFRVFEENARVIVFTESEEAEYPPHVEKALSDCSVESILRNLYER----DIDSVLVEGGSKVFSEFLDHA- 306 (360)
T ss_dssp CTTCTTTTCCCGGGSSSSCEEEEESCSSCCCCTTSEEEECCCCHHHHHHHHHHT----TCCEEEECCCHHHHHHHGGGC-
T ss_pred CCCCCCChhHhHHhcCCCcEEEEECCCchhhccCcEEEcCCCCHHHHHHHHHhC----CCCEEEEEecHHHHHHHHHCC-
Confidence 887532211 00 1121 22 3799999999876 789999999999999999999
Q ss_pred cCEEEEEEECCcc-CCceecCC----CC-ccCceEeeeccCceeCcccEEEEEEEEc
Q 024737 208 CDAIHITKIETSI-ECDTFIPA----ID-LSLFQQRYSSQPLVENNIQFSFVTYVRV 258 (263)
Q Consensus 208 vDel~LT~I~~~l-eGD~fFP~----~d-~~~f~~~~~~~~~~en~~~~~f~~Y~r~ 258 (263)
||+++++.|..+ +|-++|.. ++ ...|+++... ...++ ....|.++
T Consensus 307 -DEl~l~iaP~llG~G~~lf~~~~~~~~~~~~L~l~~~~--~~g~d---v~l~y~~~ 357 (360)
T 2hxv_A 307 -DVVFGFYSTKIFGKGLDVFSGYLSDVSVPPKFKVVNVE--FSDSE---FLVEMRPC 357 (360)
T ss_dssp -SEEEEEEESCCCSSSEETTTTCCCCTTSCCCEEEEEEE--EETTE---EEEEEEEC
T ss_pred -CEEEEEEcceEEcCCCcccccccccccccccceEeEEE--EECCc---EEEEEEeC
Confidence 999999999988 55678843 22 2346554332 22332 56677765
No 34
>2p4g_A Hypothetical protein; pyrimidine reductase-like protein, structural genomics, JOIN for structural genomics, JCSG; 2.30A {Corynebacterium diphtheriae}
Probab=99.57 E-value=2.1e-13 Score=123.00 Aligned_cols=169 Identities=17% Similarity=0.124 Sum_probs=113.1
Q ss_pred CCcEEEEEEEeCCCeeecCCCCCCCC-hhhHHHHHHHhhCCCCCCCCCEEEEcchhhhhccCC--C----CC--------
Q 024737 78 RRPYQVVVAATHDMGIGKDGKLPWNL-PSDLKFFKQLTMSTSDPGKRNAVVMGRKTWESISPL--Y----RP-------- 142 (263)
Q Consensus 78 ~rkIilivAvS~dG~IG~~G~LpW~~-~eD~~~F~~~T~~~~~~~~~~avIMGRkTyeslp~~--~----~p-------- 142 (263)
++++++.+|+|+||+.+.+|...|.. +++..++.++... .+++||||+||+.-... . +|
T Consensus 33 rP~V~lk~a~SLDG~a~~~g~s~wit~~~~~~~~~~lr~~------~DaIlvG~~T~~~d~p~l~~~~~r~~~~r~~~g~ 106 (270)
T 2p4g_A 33 EPECRAIAITSINGSATLSGVSGPMGDQTDADLLIQLRGW------ADAIVVGAETARKENYGPVVLPHGIKNQRQKLGR 106 (270)
T ss_dssp CCEEEEEEEEETTSBSCBTTBSGGGCCHHHHHHHHHHHHH------CSEEEEEHHHHHHTTCCSCCCCHHHHHHHHHTTC
T ss_pred CCEEEEEEEECCCCCcCCCCCccCcCCHHHHHHHHHHHHH------CCEEEEChHHhhhhCCccccccccccccccccCC
Confidence 78899999999999944588888964 4555666665543 69999999999843100 0 00
Q ss_pred CCCCcEEEEcCCCCCCCC---------C--------------------------CCCeEEe------CCHHHHHHHhcCC
Q 024737 143 LPGRLNVVLTHSGSFNIA---------S--------------------------LENVEIC------RSIHLALELLAEP 181 (263)
Q Consensus 143 lp~r~nIVlSrt~~~~~~---------~--------------------------~~~v~v~------~sieeai~~l~~~ 181 (263)
.+..+.+|++++...+.. . ..++.+. .++.++++.|++.
T Consensus 107 ~~~p~~vV~d~~~~~p~~~~~~~~~~~~~~~~~V~t~~~~~~~~~~~~~~~~l~~~gv~vi~~~~~~~dl~~~l~~L~~~ 186 (270)
T 2p4g_A 107 CGLPKLTLLSKSLYFDFSSELFSPDLPSELSPLVITQQPANNSEQWDQRLQKLIDVGVEVIVAPTSTNPLKIAFDALHAR 186 (270)
T ss_dssp CSSCEEEEECSSCCCCTTSGGGCTTSCGGGSCEEEEECCSSCCHHHHHHHHHHHHHTCCEEEECSSSCHHHHHHHHHHTT
T ss_pred CCCCcEEEECCCCCCCccchhhcCCCCCcceEEEEEcCccccccchHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHHHHC
Confidence 012234555544211000 0 0023221 2688999999876
Q ss_pred CCCCCCCcEEEEeCHHHHHHHhCCCCcCEEEEEEECCcc-C-CceecCC--CC-ccCceEeeeccCceeCcccEEEEEEE
Q 024737 182 PYCSSIEKVFVIGGGQILREALNAPECDAIHITKIETSI-E-CDTFIPA--ID-LSLFQQRYSSQPLVENNIQFSFVTYV 256 (263)
Q Consensus 182 ~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~LT~I~~~l-e-GD~fFP~--~d-~~~f~~~~~~~~~~en~~~~~f~~Y~ 256 (263)
+.++|+|-||+.+..+||++|||||+++++.|..+ + |-++|+. .+ ...|++.... ... --+..+..|+
T Consensus 187 ----g~~~vlvEGG~~l~~sfL~agLVDEl~l~iaP~llG~~g~~~f~~~~~~~~~~l~l~~~~--~~~-~~g~v~l~Y~ 259 (270)
T 2p4g_A 187 ----RLKKISIEGGPSVYRQALSLGIVDRLHLTIAPNIICPVESPLFGKISDDSFTTRLVLEML--SSS-PNGLIFSRYK 259 (270)
T ss_dssp ----TCCEEEEEECHHHHHHHHHHTCCCEEEEEEESCCCSSCSSBTTCSCTTSCCCCCEEEEEE--EEC-TTCCEEEEEE
T ss_pred ----CCCEEEEecCHHHHHHHHHCCCCeEEEEEEcCEEEcCCCcCcccCcCcCcCcceEEEEEE--Eec-cCCEEEEEEE
Confidence 78999999999999999999999999999999988 3 6788866 22 3457665431 111 0257888998
Q ss_pred EcC
Q 024737 257 RVG 259 (263)
Q Consensus 257 r~~ 259 (263)
+++
T Consensus 260 ~~~ 262 (270)
T 2p4g_A 260 VIR 262 (270)
T ss_dssp ECC
T ss_pred ECC
Confidence 764
No 35
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=41.89 E-value=15 Score=33.12 Aligned_cols=43 Identities=28% Similarity=0.704 Sum_probs=33.0
Q ss_pred CCCcEEEEeC--HHHHHHHhCCCCcCEEEEEEECCcc--CCceecCC
Q 024737 186 SIEKVFVIGG--GQILREALNAPECDAIHITKIETSI--ECDTFIPA 228 (263)
Q Consensus 186 ~~~~I~ViGG--a~Iy~~~L~~~lvDel~LT~I~~~l--eGD~fFP~ 228 (263)
..++|.|+|| |.+.+++++++-+.++.+-.|+..+ -+..+||.
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~ 129 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPN 129 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHH
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcc
Confidence 5689999988 5688999998878888777776654 36678875
Done!