BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024739
(263 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVQ6|P2B10_ARATH F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1
Length = 272
Score = 197 bits (501), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 159/265 (60%), Gaps = 16/265 (6%)
Query: 3 SPFAMFAQ-CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSF 61
SPF F + CIS+IIS P +A ++ F+S V SD +WEKFLP+DY+ +I S
Sbjct: 12 SPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRV 71
Query: 62 STSSLVTSLSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQH 121
+S KK+LYF LC +P+L +++ S L+ SGK+C M+ A LSI WG +PQ+
Sbjct: 72 FSS-------KKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQY 124
Query: 122 WKWLSLPESRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPI 181
W+W+ +PESRF +VA+L+ V FEI R T++LS +T Y+ Y+VFK V+ GF+ I
Sbjct: 125 WQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAI 184
Query: 182 EFDVYFEGNDTHK----MHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNENG--DDGAV 235
E V G + + A+ N+ + R DGWMEI +GEFFN+ G D+ +
Sbjct: 185 EAAVGVVGQEPSRRLICFSEAIRRGRRNV-VKPKQREDGWMEIELGEFFNDGGIMDNDEI 243
Query: 236 ICRVCESEP-TPKCGIIIEGIELRP 259
E++ KCG+II+GIE+RP
Sbjct: 244 EMSALETKQLNRKCGLIIQGIEIRP 268
>sp|Q3E6P4|FB95_ARATH F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2
SV=1
Length = 320
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 151/269 (56%), Gaps = 15/269 (5%)
Query: 3 SPFAMFAQ-CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSF 61
SPF + + CIS+IIS +P +A +S F+S V SD VW+KFLP +Y+ ++S S
Sbjct: 59 SPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRV 118
Query: 62 STSSLVTSLSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQH 121
S KK+LYF LC+NP+LI + SF L+ SGK+C M+ ++ L ITWGSSP++
Sbjct: 119 FAS-------KKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEY 171
Query: 122 WKWLSLPESRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPI 181
W+W+S+PESRF ++AEL V FEI + ++LS T Y+ Y+VFK + G P+
Sbjct: 172 WQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPV 231
Query: 182 EFDVYFEGNDTHKMHSALLDPPANMPLLSL-------NRRDGWMEIGIGEFFNENGDDGA 234
E + G ++ K + P R DGWME +GEFFNE D
Sbjct: 232 EVGLGLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEFFNEERCDEI 291
Query: 235 VICRVCESEPTPKCGIIIEGIELRPKNGR 263
+ P+ K G+II+GIE RP +
Sbjct: 292 EFSVIEIKSPSWKSGLIIQGIEFRPTKSQ 320
>sp|Q949S5|P2B11_ARATH F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1
Length = 257
Score = 184 bits (468), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 148/256 (57%), Gaps = 15/256 (5%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
CI+ I+SL TP + +LS+ F+S SD VW FLP+D+ + F+ + + +
Sbjct: 8 CIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFP-----AGFAAPAGLPT- 61
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPES 130
+K+L+F L NP+LIN +SF+L+ +SG KCYM+ AR L+I WG ++W W+SLP +
Sbjct: 62 -RKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNT 120
Query: 131 RFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFEGN 190
RF EVAEL +VW EI +I +LS T YA Y VFK+ + GF +P+E +
Sbjct: 121 RFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFR-QPVETSLVLADT 179
Query: 191 DTHK------MHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESE- 243
++ M S + D + RRDGW E+ +G+FF GD G + + E++
Sbjct: 180 ESTDNVVQPSMISLMQDSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKG 239
Query: 244 PTPKCGIIIEGIELRP 259
P K G+I+ GIE+RP
Sbjct: 240 PYEKKGLIVYGIEIRP 255
>sp|Q9ZVR5|PP2B2_ARATH Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=4
SV=2
Length = 310
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 146/257 (56%), Gaps = 15/257 (5%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
CIS+IIS +P +A +S F+S V+SDSVW+KFLPSDY ++ S +S
Sbjct: 54 CISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSRVFSS------ 107
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVG-ARGLSITWGSSPQHWKWLSLPE 129
KK+LYF +C NP+L+ + SF L+ E+GKKC+M+ + + ITW S+PQ+W+W+S+PE
Sbjct: 108 -KKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPE 166
Query: 130 SRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFEG 189
+RF EV EL V FE+ + TK LS T Y+ Y+VFK P+E V G
Sbjct: 167 ARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVGLVG 226
Query: 190 NDTHKMHSALLDPPANMP-------LLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCES 242
++ + H + P R+DGWME +G+FFNE+G D +
Sbjct: 227 QESSQRHIYFVGPSDQRRDRETRDVTRPTKRKDGWMEAELGQFFNESGCDVVDTSILEIK 286
Query: 243 EPTPKCGIIIEGIELRP 259
P K G+II+GIE RP
Sbjct: 287 TPYWKRGLIIQGIEFRP 303
>sp|Q9FLU7|P2B12_ARATH Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12
PE=4 SV=1
Length = 251
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 143/253 (56%), Gaps = 13/253 (5%)
Query: 10 QCISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTS 69
+CI+ +IS +P +A ++S+ +S DS++ WE+FLPSDY+ I S ++
Sbjct: 9 ECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNS-------LSR 61
Query: 70 LSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPE 129
S K+L+ C +P+LI + SF ++ SGKKC+M+ AR L I W SP+ W W+S+P+
Sbjct: 62 FSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPD 121
Query: 130 SRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETRE-GFETRPIEFDVYFE 188
SRF EVA L +V FEI +I T +LS TNY+ YLVFK E GFE+ P+E
Sbjct: 122 SRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSFRST 181
Query: 189 GNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPKC 248
+ + L +R DGW+EI +GE++ D+ + + E K
Sbjct: 182 RTEVYNNRRVFLKSGTQE-----SREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWKG 236
Query: 249 GIIIEGIELRPKN 261
GII++GIE+RPK
Sbjct: 237 GIIVQGIEIRPKE 249
>sp|Q9ZVR0|PP2B6_ARATH Putative F-box protein PP2-B6 OS=Arabidopsis thaliana GN=PP2B6 PE=4
SV=1
Length = 307
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 152/271 (56%), Gaps = 20/271 (7%)
Query: 3 SPFAMFAQ-CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIIS-ISS 60
SPF + CIS+IIS +P + +S +F V DS+WEKFLPS+Y+ +I
Sbjct: 43 SPFDDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPPWRV 102
Query: 61 FSTSSLVTSLSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQ 120
FS SKK LYF LCY+P+L+ + SF L+ SGKKC ++ A+ L IT G++P+
Sbjct: 103 FS--------SKKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPE 154
Query: 121 HWKWLSLPESRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRP 180
+W+W+ L ES F +V EL F++ + T+ILS T+Y+ Y+V+K + R G P
Sbjct: 155 YWQWIELCESSFEKVPELLNNRSFQMGGSMSTQILSLGTHYSVYIVYKIKDERHGLRDLP 214
Query: 181 IEFDVYFEGNDTHKMHSALLDP-------PANMPLLSLNRRDGWMEIGIGEFFNENGD-- 231
I+ V F+G + K + P + S R DGWME IG+FFN+ G
Sbjct: 215 IQVGVGFKGQEMPKQFICFDESTDKTKEWPKKKLMKSKKRGDGWMEAEIGDFFNDGGLMG 274
Query: 232 -DGAVICRVCESEPTPKCGIIIEGIELRPKN 261
D + V + P KCG++IEGIE RPK+
Sbjct: 275 FDEVEVSIVDVTSPNLKCGVMIEGIEFRPKD 305
>sp|Q9ZVQ8|PP2B8_ARATH Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=4
SV=1
Length = 305
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 147/276 (53%), Gaps = 34/276 (12%)
Query: 10 QCISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTS 69
+C+S I+S +P +A L+S F S V SD VWEKF+P +Y+ +IS S
Sbjct: 42 ECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLIS-----QSRAFKF 96
Query: 70 LSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPE 129
LSKK+LYF LC +LI++ S ++ + K+C M+ A L+I WG+SPQ W+W+ P+
Sbjct: 97 LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQ 156
Query: 130 SRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFET----------- 178
+RF VAEL V FEI RI ++++S KT Y+ Y+V+K + GFE
Sbjct: 157 ARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGVVG 216
Query: 179 --------RPIEFDVYFEGNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNENG 230
R I FD + + L P R+DGWMEI IGEFFNE G
Sbjct: 217 QDLEESCRRYICFDETMDEQFRRRDRGKNLVKPE-------RRKDGWMEIKIGEFFNEGG 269
Query: 231 ---DDGAVICRVCESEPTPKCGIIIEGIELRPKNGR 263
DD + + + K G+II+GIE+RP N R
Sbjct: 270 LLNDDEIEMVALEAKQRHWKRGLIIQGIEIRPTNIR 305
>sp|Q9FV02|SKIP3_ARATH F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2
Length = 294
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 141/262 (53%), Gaps = 23/262 (8%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
CIS+IIS +P +A ++ F+S V SD VWEKFLP+DY+ +I T S V S
Sbjct: 31 CISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLI------TPSRVFS- 83
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSIT-WGSSPQHWKWLSLPE 129
SKK+LYF LC +P+LI + MS L+ SGK+C M+ A ++++ Q + W+ PE
Sbjct: 84 SKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPE 143
Query: 130 SRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFEG 189
SRF VA L+ + FE R+ T++LS +T Y+ Y+VFK + GF+ IE V G
Sbjct: 144 SRFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYIVFKKADNWCGFKGVSIEAVVGIVG 203
Query: 190 N---------DTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNENG---DDGAVIC 237
DTH A P L R DGWME IGEF+NE G D I
Sbjct: 204 EESFRSFICFDTHGKGQARKRKVVAKPEL---REDGWMETEIGEFYNEGGLMSSDEVEIS 260
Query: 238 RVCESEPTPKCGIIIEGIELRP 259
V K G++I GIE+RP
Sbjct: 261 TVEGKYAQQKRGLVILGIEIRP 282
>sp|Q9ZVR1|PP2B5_ARATH F-box protein PP2-B5 OS=Arabidopsis thaliana GN=PP2B5 PE=2 SV=1
Length = 284
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 144/262 (54%), Gaps = 25/262 (9%)
Query: 10 QCISHIISLI-TPGNASKLSSTYPAFKSVVDSDSVWEKFLPS-DYKKIISISSFSTSSLV 67
C++ I S TP +A + +F +SDSVWEKFLP DY ++ S +S
Sbjct: 40 DCLAIISSFTSTPRDAFLAALVSKSFGLQFNSDSVWEKFLPPPDYVSLLPKSRVFSS--- 96
Query: 68 TSLSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSL 127
KK+LYF LC +P +N MSF LD SGKKC M+ A+ L I+ +P++WKW+S+
Sbjct: 97 ----KKELYFALC-DPFPNHNGKMSFRLDKASGKKCVMLSAKKLLISRVVNPKYWKWISI 151
Query: 128 PESRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYF 187
PESRF EV EL + F+I + T+I+S T+Y+ Y+V+ GF+T PI+ V F
Sbjct: 152 PESRFDEVPELLNIDSFDIRGVLNTRIISPGTHYSAYIVYTKTSHFNGFQTSPIQAGVGF 211
Query: 188 EGNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNENGDDG--AVICRVCESEPT 245
+ H M + S R+DGWME IG+F+NE G G + V +
Sbjct: 212 Q---RHGMSKTFIR------FDSKKRQDGWMEAKIGDFYNEGGLIGFNLIEVSVVDVARY 262
Query: 246 P----KCGIIIEGIELRPKNGR 263
P K G+IIEGIE RPK+ R
Sbjct: 263 PHMNMKSGLIIEGIEFRPKDSR 284
>sp|Q6NPT8|PP2B1_ARATH F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1
Length = 336
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 160/307 (52%), Gaps = 59/307 (19%)
Query: 6 AMFAQCISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSS 65
A+ CIS +IS +P +A ++S + KS SD VWE FLPS+Y ++ S+
Sbjct: 34 ALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSA----- 88
Query: 66 LVTSLSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWL 125
LSKK+++ L N +L+ N SF ++ SGKKCYM+ A L+I WG SP +WKW+
Sbjct: 89 --NHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWI 146
Query: 126 SLPESRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETRE-GFETRPIEF- 183
++PES+F +VAEL+ V FE+ +I +LS T+Y+ Y+VFK R GF+ P+E
Sbjct: 147 TVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAG 206
Query: 184 -----------DVYFE-GN-DTHKMHS-------ALLDPPANM--PLLSL---------- 211
VYFE GN D+ S A++ M P + +
Sbjct: 207 VGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEVEG 266
Query: 212 ------------NRRDGWMEIGIGEFFNEN---GDDGA--VICRVCESEPTP-KCGIIIE 253
R DGW E+ +G+F+ N GDDG+ + + E++ K G+II+
Sbjct: 267 ERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQ 326
Query: 254 GIELRPK 260
GIE+RP+
Sbjct: 327 GIEIRPE 333
>sp|O80494|P2B15_ARATH F-box protein PP2-B15 OS=Arabidopsis thaliana GN=PP2B15 PE=2 SV=2
Length = 289
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 135/279 (48%), Gaps = 34/279 (12%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
C++ I+S TP + ++ F+ DSD VWEKFLP+DY +IS ST
Sbjct: 7 CVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVIS---RSTDPHRIFS 63
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPES 130
SKK+LY LC ILI+N F ++ SGK Y++ +R LSITW +W W +S
Sbjct: 64 SKKELYRCLC-ESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDS 122
Query: 131 RFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFEGN 190
RF E +L + EI+ +I+T LS TNY YL+ K G + P E + GN
Sbjct: 123 RFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKV-GN 181
Query: 191 DTHKMHSALL-------------------DPPANMPLLSLNRR------DGWMEIGIGEF 225
K+ S L A ++ +RR DGWMEI +GEF
Sbjct: 182 GEKKIKSTYLSCLDNKKQQMERVFYGQREQRMATHEVVRSHRREPEVRDDGWMEIELGEF 241
Query: 226 FNENG---DDGAVICRVCESEPTP-KCGIIIEGIELRPK 260
+G DD V+ + E + K GI I+GIE+RPK
Sbjct: 242 ETGSGEGDDDKEVVMSLTEVKGYQLKGGIAIDGIEVRPK 280
>sp|Q9C7K0|VBF_ARATH F-box protein VBF OS=Arabidopsis thaliana GN=VBF PE=1 SV=1
Length = 282
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 140/281 (49%), Gaps = 38/281 (13%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
CI++I++ +P +A S F+ DSD VWEKFLPSDYK +IS S+ ++
Sbjct: 8 CIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNIS--- 64
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPES 130
SKK++Y LC + +LI+N F ++ SGK Y++ AR +SIT +W W ++ +S
Sbjct: 65 SKKEIYRCLC-DSLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVSDS 123
Query: 131 RFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDV----- 185
RF E AEL + EI +I+T++LS+ T Y YL+ K + G + P E +
Sbjct: 124 RFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSKNG 183
Query: 186 ---------------------YFEGNDTHKMHSALL----DPPANMPLLSLNRRDGWMEI 220
F GN +M + D P R DGWMEI
Sbjct: 184 QISKSATYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKC---RDDGWMEI 240
Query: 221 GIGEFFNENGDDGAVICRVCESEPTP-KCGIIIEGIELRPK 260
+GEF G+D V + E + K GI+I+GIE+RPK
Sbjct: 241 ELGEFETREGEDDEVNMTLTEVKGYQLKGGILIDGIEVRPK 281
>sp|Q9ZVQ9|PP2B7_ARATH F-box protein PP2-B7 OS=Arabidopsis thaliana GN=PP2B7 PE=2 SV=1
Length = 307
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 140/263 (53%), Gaps = 23/263 (8%)
Query: 10 QCISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTS 69
+CIS IIS +P +A + F+S V SD VWEKF+P +Y+ ++S S +
Sbjct: 46 ECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRSQHFS------ 99
Query: 70 LSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPE 129
SKK+L+F LC +LIN + ++ +GK+C M+ A L++ S+ WKW++ P
Sbjct: 100 -SKKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASALNL---STHHTWKWITNPV 155
Query: 130 SRFPE-VAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFE 188
S + E V EL FEI R T+ LS +T Y+ Y+VF + GF +E V
Sbjct: 156 SAWLETVPELLTTRWFEIRCRTNTRFLSPRTRYSVYIVFLKADICYGFAYVAMEAVVRMV 215
Query: 189 GNDTHK-------MHSAL-LDPPANMPLLSLNRR-DGWMEIGIGEFFNENG--DDGAVIC 237
G++ + H A+ L++ RR DGWMEI IGEFFNE ++ +
Sbjct: 216 GHELSESCRRYVCFHEAMEWQFLTRKNLVNPERREDGWMEIEIGEFFNEGAFRNNDEIEM 275
Query: 238 RVCE-SEPTPKCGIIIEGIELRP 259
V E ++ K G+II+GIE+RP
Sbjct: 276 SVSETTQRNTKRGLIIQGIEIRP 298
>sp|Q9C7J9|P2B13_ARATH F-box protein PP2-B13 OS=Arabidopsis thaliana GN=PP2B13 PE=2 SV=1
Length = 284
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 135/277 (48%), Gaps = 32/277 (11%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
C+++I++ +P +A S F+ DSD VWEKFLPS YK +IS S T
Sbjct: 8 CVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQS---TDHHRIFS 64
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPES 130
SKK++Y LC + +LI+N F ++ SGK Y++ AR +SIT+ + W ++ +S
Sbjct: 65 SKKEIYRCLC-DSLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVSDS 123
Query: 131 RFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFEGN 190
RF E AEL EI +I+T +LS T Y YL+ K G + P E V +
Sbjct: 124 RFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSKNG 183
Query: 191 DTHKMHSAL--LDPPAN---------------MPLLSLN----------RRDGWMEIGIG 223
+K + L LD M + ++ R DGW+EI +G
Sbjct: 184 QNNKNTTYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKARDDGWLEIELG 243
Query: 224 EFFNENGDDGAVICRVCESEPTP-KCGIIIEGIELRP 259
EF G+D V + E + K GI+I+GIE+RP
Sbjct: 244 EFVTREGEDDEVNMSLTEVKGYQLKGGIVIDGIEVRP 280
>sp|Q570N1|PP2B3_ARATH F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2
Length = 123
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 71/119 (59%), Gaps = 8/119 (6%)
Query: 3 SPF-AMFAQCISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSF 61
SPF + CIS+IIS TP +A +S AF+S V SDSVWEKFLP DY ++ S
Sbjct: 11 SPFDGLPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPESR- 69
Query: 62 STSSLVTSLSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQ 120
LSKK+L F LC P+LI SF LD SG+KC M+ +G+ I+W +SPQ
Sbjct: 70 ------VFLSKKELCFSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVISWVNSPQ 122
>sp|Q9LF92|P2A15_ARATH F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1
Length = 300
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 18/228 (7%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
C++ + +TP L+ +F+ SDSVWEK LP +Y+ ++ + SL
Sbjct: 28 CVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLP---PERYHSL 84
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPES 130
SKK + F + PI +++ +D +G+ C + ARG+SIT ++W W+ ES
Sbjct: 85 SKKDI-FAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIPTEES 143
Query: 131 RFPEVAELKLVWCFEIMARIETKI------------LSSKTNYATYLVFKFVETREGFET 178
RF VA L+ +W FE+ + + L T V F E G++
Sbjct: 144 RFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHF-ELTHGWDL 202
Query: 179 RPIEFDVYFEGNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFF 226
+P+ F + L D N L ++R W+E +GEF
Sbjct: 203 KPVRFSLSTSDGQEASCEYYLDDVERN-EALGKHKRGYWIEYRVGEFI 249
>sp|Q9LEX0|P2A13_ARATH F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1
Length = 290
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 9/224 (4%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
C++ I++ + P +L+ F+ +D +WE LP++Y+ +I+ F +L T L
Sbjct: 32 CVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYR-VIAHKVFDEITL-TKL 89
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPES 130
KK LY L P L ++ T +D +G+ C + ++ L IT ++W + ES
Sbjct: 90 IKKDLYAKLS-QPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIPTDES 148
Query: 131 RFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFEGN 190
RF A ++ +W FE+ E + S Y+ + + +T + R + + G
Sbjct: 149 RFQSAAYVQQIWWFEVGGEFEIQFPSG--TYSLFFRIQLGKTSKRLGRRICNSE-HIHGW 205
Query: 191 DTH--KMHSALLDPPANMPLLSLNRRDG-WMEIGIGEFFNENGD 231
D + A D + L LN G W +G+F N D
Sbjct: 206 DIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPD 249
>sp|Q9FJ80|P2A14_ARATH F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1
Length = 291
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 36/238 (15%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIIS--ISSFSTSSLVT 68
CI+ + + P L+ +F SD+VWE LPS+YK ++ + +
Sbjct: 28 CITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQQQVGVKD 87
Query: 69 SL--SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLS 126
L KK++Y LC P L + T LD SGK + + + IT ++W+ +S
Sbjct: 88 KLIYRKKEIYARLC-RPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDRRYWEHIS 146
Query: 127 LPESRFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKF---------------VE 171
ESRF + L+ +W E + +I + K + L+FK ++
Sbjct: 147 SDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYS----LLFKIQLGKPIRKCGRKTCSLD 202
Query: 172 TREGFETRPIEFDVYFEGNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNEN 229
G++ +P+ F + + D M L+ W+ G+F EN
Sbjct: 203 QVHGWDIKPVRFQL------------STSDGQCAMSERHLDESGRWVYHHAGDFVVEN 248
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 103 CYMVGARGLSITWGSSPQHWKWLSLPESR----FPEVAELKLVWCFEIMARIETKILSSK 158
+M+ AR LSI W HW WL LP E+A LK ++ + +T+ L+ +
Sbjct: 258 VFMIDARDLSIAWSEDSNHWTWLPLPNQNSNESVMEIAFLKSASWLDVAGKFDTRYLTPR 317
Query: 159 TNYATYLVFKFVETREGFETRPIEFDVYFEGNDTHKMHSALLDPPANMPLLSLNRRDGWM 218
T Y V K T E ++ D+ + + D + D W+
Sbjct: 318 TRYEVVFVVKLEYTFEWETLVKLKLDLPNTWEKPQEQSVDMFDYIS----------DQWL 367
Query: 219 EIGIGEFFNENGDDGAVICRVCESE-PTPKCGIIIEGIELRPK 260
+I +GEF + G + + E E K G+ ++G+ +RPK
Sbjct: 368 DIPVGEFTTSKKNVGEISFAMYEHECQLWKSGLFVKGVTIRPK 410
>sp|Q9CAN4|P2A11_ARATH F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1
Length = 289
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
C++ I+ + P + S AF +D VWE LP DYK I+ S +L
Sbjct: 33 CVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKI---LGSFPDNL 89
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPES 130
K+ ++ L N ++ +D +G C A+GLSIT ++W + +S
Sbjct: 90 RKRDIFTFLSRVNSFDEGNKKAW-VDKRTGGLCLCTSAKGLSITGIDDRRYWSHIPSDDS 148
Query: 131 RFPEVAELKLVWCFEIMARIETKILSSKTNYATYLV-----------FKFVETRE--GFE 177
RF VA ++ +W F++ I+ + Y+ Y +K V+T + G+
Sbjct: 149 RFASVAYVQQIWWFQVDGEIDFPFPAG--TYSVYFRLQLGKPGKRFGWKVVDTEQVHGWN 206
Query: 178 TRPIEFDVYFEGNDTHKMHSALLDPPAN 205
+P+ F + E + H +L N
Sbjct: 207 IKPVRFQLSTE-DGQHSSSQCMLTEAGN 233
>sp|Q9LN77|P2A12_ARATH F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1
Length = 291
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 11 CISHIISLITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSL 70
C++ I+ + P + S AF+ +D VWE LP +Y+ ++ +L
Sbjct: 35 CVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKI---LGGFPENL 91
Query: 71 SKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPES 130
K+ LY L ++ T +D + C + A+GLSIT ++W + ES
Sbjct: 92 QKRHLYAFLSRINSF-DDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHIPTDES 150
Query: 131 RFPEVAELKLVWCFEIMARIE 151
RF VA L+ +W FE+ I+
Sbjct: 151 RFSSVAYLQQIWWFEVDGEID 171
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 105 MVGARGLSITWGSSPQHWKWLSLPE----SRFPEVAELKLVWCFEIMARIETKILSSKTN 160
M+ AR L+I W S +HWKW++L + F EVAEL V+ F++ ++T ++ T+
Sbjct: 308 MICARDLNIEWSHSEEHWKWVNLDHNISSNTFVEVAELLGVYWFDVSGSLDTTEMAPWTH 367
Query: 161 YATYLVFKFVETREGFETRPIEFDVYFEGNDTHKMHSALLDPPANMPLLSLNRRD----- 215
Y V D F+ N KM+ ++ P D
Sbjct: 368 YEVLFVVNLK-------------DSAFKWNAAVKMNLFYINSRPGGPGTQERAVDMRQHI 414
Query: 216 --GWMEIGIGEFFNENGDDGAVICRVCESEPTP-KCGIIIEGIELRPKN 261
GW+ I GEF + G + R+ E + + G+I++G+ +RP N
Sbjct: 415 GKGWVTIHAGEFITTPENVGLIGFRMSEVDSGDNRGGLIVKGVLIRPIN 463
>sp|Q9C8U9|P2A04_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis
thaliana GN=PP2A4 PE=4 SV=1
Length = 165
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 100 GKKCYMVGARGLSITWGSSPQHWKWLSL----PESRFPEVAELKLVWCFEIMARIETKIL 155
G+K +M+ AR LSI W ++W WL L + + A L+ V ++ + +T+ L
Sbjct: 9 GQK-HMIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTREL 67
Query: 156 SSKTNYATYLVFKFVETREGFETRPIEFDVYF-EGNDTHKMHSALLDPPANMPLLSLNRR 214
+ +T Y V K +T G+ P+ + +G + S L + +R
Sbjct: 68 TLETTYEVVYVVKLEDTASGWNI-PVNLKLTLPDGKKRPQERSMCLKE-------HIGKR 119
Query: 215 DGWMEIGIGEFFNENGDDGAVICRVCESEPTP-KCGIIIEGIELRPKN 261
W++I GEF + G + + E++ K G+ ++ +E+RPKN
Sbjct: 120 --WIDISAGEFVTSPDNAGEISFSMYETKSCCWKRGLFVKCVEIRPKN 165
>sp|O81865|P2A01_ARATH Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1
PE=2 SV=1
Length = 246
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 15/197 (7%)
Query: 69 SLSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSLP 128
SLS L L L + + +D E C+M+ A+ LSITW +W W +
Sbjct: 61 SLSSVNLSEQLRSGVFLKPKKQIKYWVD-ERNSNCFMLFAKNLSITWSDDVNYWTWFTEK 119
Query: 129 ES--RFPEVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVY 186
ES E LK V +I + +T+ L+ Y K + G++T P+ +
Sbjct: 120 ESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVKLEDPAYGWDT-PVNLKLV 178
Query: 187 F-EGNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCE-SEP 244
G + + L +P R W+++ +GEF E G + + E +
Sbjct: 179 LPNGKEKPQEKKVSL---RELP------RYKWVDVRVGEFVPEKSAAGEITFSMYEHAAG 229
Query: 245 TPKCGIIIEGIELRPKN 261
K G+ ++G+ +RPK
Sbjct: 230 VWKKGLSLKGVAIRPKQ 246
>sp|Q9ZVR3|PP2B4_ARATH Putative protein PHLOEM PROTEIN 2-LIKE B4 OS=Arabidopsis thaliana
GN=PP2B4 PE=4 SV=1
Length = 144
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 57/140 (40%), Gaps = 30/140 (21%)
Query: 150 IETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFE-----------GND------- 191
+ T+ILS KT Y+ Y+V+K + GF+ + F + GND
Sbjct: 1 MNTQILSQKTRYSAYIVYKTIYRFHGFKHIGVGFIGHGTPKAKRWERKDLGNDWLGCKKK 60
Query: 192 --------THKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNENGD----DGAVICRV 239
+ S D P + DGWM GEFF E G D V+ +
Sbjct: 61 FKASKKQKFYSNKSTFTDKPITHLIKLEEGEDGWMATEFGEFFAEGGGLLDCDEIVLSVI 120
Query: 240 CESEPTPKCGIIIEGIELRP 259
KCG+II+GI++RP
Sbjct: 121 DIDYAYWKCGLIIQGIDIRP 140
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 105 MVGARGLSITWGSSPQHWKWLSL---PESRFPEVAELKLVWCFEIMARIETKILSSKTNY 161
MV AR L IT PQ W W ++ P S E+A L V+ +I+ I T+ L+ Y
Sbjct: 238 MVPARDLDITHSEKPQKWTWSTINEAPNSAEIEIATLNKVYWLKIVGTITTENLTPGAKY 297
Query: 162 ATYLVFKFVETREGFETRPIEFD---VYFEGNDTHKMHSALLDPPANMPLLSLNRRDG-- 216
V K G+E +P+ V +G+D +D N LN G
Sbjct: 298 EAVFVVKLENNASGWE-QPVNLKLKVVQHDGDDDR------VDRTEN-----LNDYIGQN 345
Query: 217 WMEIGIGEFFNENGDDGAVICRVCES--EPTPKCGIIIEGIELRPKN 261
W++I G F A I + K G++++G+ +RP N
Sbjct: 346 WVDILAGVFVVPPKTTPATIIFTMYQYEDKYKKKGLVVKGVAIRPTN 392
>sp|O81866|P2A02_ARATH Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2
PE=2 SV=1
Length = 194
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 134 EVAELKLVWCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFEGNDTH 193
EVA+++ V E++ + ET+ L+ + Y V K +++ +G++ R + F + +T
Sbjct: 76 EVAKMERVAWLEVVGKFETEKLTPNSLYEVVFVVKLIDSAKGWDFR-VNFKLVLPTGETK 134
Query: 194 KMHSALLDPPANMPLLSLNRRDGWMEIGIGEFF-NENGDDGAVICRVCESEPTP-KCGII 251
+ N+ LL R+ W+EI GEF + G + + E + K G+I
Sbjct: 135 -------ERRENVNLLE---RNKWVEIPAGEFMISPEHLSGKIEFSMLEVKSDQWKSGLI 184
Query: 252 IEGIELRPKN 261
++G+ +RPKN
Sbjct: 185 VKGVAIRPKN 194
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 85 LINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQHWKWLSL---PESRFPEVAELKLV 141
L+ N ++ + E+ KC+MV AR L ++ +W W S+ P EVA L V
Sbjct: 158 LLANISVGVYREKEANSKCFMVPARKLQMSHSEKLINWTWSSIYETPNDAAIEVAMLNEV 217
Query: 142 WCFEIMARIETKILSSKTNYATYLVFKFVETREGFETRPIEFDVYFEGNDTHKMHSALLD 201
+ T+ L+ T Y + +T G+E +P+ ++ +++
Sbjct: 218 HWLHMSGNFHTRNLTPGTKYEVVFLVSLDDTSSGWE-QPVNLNL------------KVIN 264
Query: 202 PPANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVIC--RVCESEPT----------PKCG 249
P SL R+ +E IGE + + G ++ R ++ T K G
Sbjct: 265 PDGTE---SLQERETSLECHIGENW-VDIQAGVLVAPPRNAAAKMTFTMYQYVTSDRKSG 320
Query: 250 IIIEGIELRP 259
++++G+ +RP
Sbjct: 321 LVVKGVAIRP 330
>sp|A6QIR5|ALR_STAAE Alanine racemase OS=Staphylococcus aureus (strain Newman) GN=alr
PE=3 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 203 PANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPK 247
P + LL + DG++ I G F N NG VI RVC + K
Sbjct: 274 PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK 318
>sp|Q2FF55|ALR_STAA3 Alanine racemase OS=Staphylococcus aureus (strain USA300) GN=alr
PE=3 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 203 PANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPK 247
P + LL + DG++ I G F N NG VI RVC + K
Sbjct: 274 PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK 318
>sp|Q6GF03|ALR1_STAAR Alanine racemase 1 OS=Staphylococcus aureus (strain MRSA252)
GN=alr1 PE=3 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 203 PANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPK 247
P + LL + DG++ I G F N NG VI RVC + K
Sbjct: 274 PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK 318
>sp|Q5HED1|ALR1_STAAC Alanine racemase 1 OS=Staphylococcus aureus (strain COL) GN=alr1
PE=1 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 203 PANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPK 247
P + LL + DG++ I G F N NG VI RVC + K
Sbjct: 274 PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK 318
>sp|Q9ZAH5|ALR1_STAA8 Alanine racemase 1 OS=Staphylococcus aureus (strain NCTC 8325)
GN=alr1 PE=3 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 203 PANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPK 247
P + LL + DG++ I G F N NG VI RVC + K
Sbjct: 274 PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK 318
>sp|P63481|ALR1_STAAW Alanine racemase 1 OS=Staphylococcus aureus (strain MW2) GN=alr1
PE=3 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 203 PANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPK 247
P + LL + DG++ I G F N NG VI RVC + K
Sbjct: 274 PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK 318
>sp|Q6G7N9|ALR1_STAAS Alanine racemase 1 OS=Staphylococcus aureus (strain MSSA476)
GN=alr1 PE=3 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 203 PANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPK 247
P + LL + DG++ I G F N NG VI RVC + K
Sbjct: 274 PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK 318
>sp|P63480|ALR1_STAAN Alanine racemase 1 OS=Staphylococcus aureus (strain N315) GN=alr1
PE=1 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 203 PANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPK 247
P + LL + DG++ I G F N NG VI RVC + K
Sbjct: 274 PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK 318
>sp|P63479|ALR1_STAAM Alanine racemase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=alr1 PE=1 SV=1
Length = 382
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 203 PANMPLLSLNRRDGWMEIGIGEFFNENGDDGAVICRVCESEPTPK 247
P + LL + DG++ I G F N NG VI RVC + K
Sbjct: 274 PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVK 318
>sp|Q9LNJ9|FKGP_ARATH Bifunctional fucokinase/fucose pyrophosphorylase OS=Arabidopsis
thaliana GN=FKGP PE=1 SV=2
Length = 1055
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 66 LVTSLSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGL 111
LV SL ++K+Y + Y+ ++ T S LDH SG +VG R L
Sbjct: 334 LVNSLGRQKMYSYCTYDLQFLHFGTSSEVLDHLSGDASGIVGRRHL 379
>sp|B7UHG4|TRUD_ECO27 tRNA pseudouridine synthase D OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=truD PE=3 SV=1
Length = 349
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 11/120 (9%)
Query: 120 QHWKWLSLPESRFPEVAELKLVWCFEIM-ARIETKI-LSSKTNYATYLVFKFVETREGFE 177
+ W +P P+++ +L C + AR + K+ L + A LV + V R+ E
Sbjct: 86 EQWLCARVPGKEMPDLSAFQLEGCQVLQYARHKRKLRLGALKGNAFTLVLREVSNRDDVE 145
Query: 178 TRPIEFDV-----YFE----GNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNE 228
R I+ V YF G + AL N P+ N+R W+ FFN+
Sbjct: 146 QRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSAFFNQ 205
>sp|B3MK83|FICD_DROAN Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila ananassae GN=GF14521 PE=3 SV=1
Length = 497
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 19 ITPGNASKLSSTYPAFKSVVDSDSVWEKFLPSDYKKIISISSFSTSSLVTSLSKKKLYFH 78
I+P N+ L++ V S+ E+ L S K ++S+ SS +KK+ YF
Sbjct: 187 ISPSNSEALANRQRTADVV---QSLDERRLESLDSKRDALSAIHESSAALRRAKKEAYFQ 243
Query: 79 LCYNPILINNNTMSFA 94
Y+ + I NTM+ A
Sbjct: 244 HIYHTVGIEGNTMTLA 259
>sp|Q7V9Q4|RUVB_PROMA Holliday junction ATP-dependent DNA helicase RuvB
OS=Prochlorococcus marinus (strain SARG / CCMP1375 /
SS120) GN=ruvB PE=3 SV=1
Length = 356
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 44 WEKFL-PSDYKKIISISSFSTSSLVTSLSKKKLYFH-LCYNPILINNNTMSFALDHESGK 101
W++F+ S K+++ IS + +LS+K+ H L Y P + TM+ L +E G
Sbjct: 45 WDEFIGQSALKEVLGIS------VKAALSRKEALDHVLLYGPPGLGKTTMALVLGNELGV 98
Query: 102 KCYMVGARGL 111
KC + A L
Sbjct: 99 KCRITSAPAL 108
>sp|B7LEG3|TRUD_ECO55 tRNA pseudouridine synthase D OS=Escherichia coli (strain 55989 /
EAEC) GN=truD PE=3 SV=1
Length = 349
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 84 ILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQH-----WKWLSLPESRFPEVAEL 138
IL N F D + K + AR +S G +H W +P PE++
Sbjct: 48 ILKNGCNTRFVADALA--KFLKIHAREVSFA-GQKDKHAVTEQWLCARVPGKEMPELSAF 104
Query: 139 KLVWCFEI-MARIETKI-LSSKTNYATYLVFKFVETREGFETRPIEFDV-----YFE--- 188
+L C + AR + K+ L + A LV + V R+ E R I+ V YF
Sbjct: 105 QLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQR 164
Query: 189 -GNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNE 228
G + AL N P+ N+R W+ FN+
Sbjct: 165 FGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQ 205
>sp|Q31XA7|TRUD_SHIBS tRNA pseudouridine synthase D OS=Shigella boydii serotype 4 (strain
Sb227) GN=truD PE=3 SV=1
Length = 349
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 84 ILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQH-----WKWLSLPESRFPEVAEL 138
IL N F D + K + AR +S G +H W +P P+++
Sbjct: 48 ILKNGCNTRFVADALA--KFLKIHAREVSFA-GQKDKHAVTEQWLCARVPGKEMPDLSAF 104
Query: 139 KLVWCFEI-MARIETKI-LSSKTNYATYLVFKFVETREGFETRPIEFDV-----YFE--- 188
+L C + AR + K+ L + A LV + V R+ E R I+ V YF
Sbjct: 105 QLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQR 164
Query: 189 -GNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNE 228
G + AL N P+ N+R W+ FN+
Sbjct: 165 FGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQ 205
>sp|Q60284|Y3525_METJA Uncharacterized protein MJECL25 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJECL25 PE=4 SV=1
Length = 110
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 53 KKIISISSFSTSSLVTSLSKKKLYFHLCYNPILINNNTMSFALDHESGKKCYMVGARGLS 112
KK+ ISS T +TSL KK+ + I N T ++ GKK VG++G
Sbjct: 10 KKLKEISS-GTVKQITSLPKKEPQEEKMSKTLRIKNTTHEKIIEM-YGKK---VGSQGEV 64
Query: 113 ITWGSSPQHWKWLSLPESRFPEVAEL 138
+ G + + W LPE +F V +L
Sbjct: 65 VDKGVAVLYALWKILPEEQFKRVVKL 90
>sp|Q9SA16|P2A09_ARATH Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9
PE=2 SV=1
Length = 180
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 95 LDHESGKKCYMVGARGLSITWGSSPQHWKWLSLPESRFPEVAELKLVWCFEIMARIETKI 154
++ ++ +K ++ GL+ WG ++ W+ E R P AELK+V E+ + KI
Sbjct: 15 MEQDNNRKAWISQPSGLNFVWGGDSRY--WVIPKEPRMP--AELKMVSWLEVTGSFD-KI 69
Query: 155 LSSKTNYATYLVFKFVETREGFETRPI 181
KT Y F G++ P+
Sbjct: 70 EPGKT-YRIGFKISFKPDATGWDKAPV 95
>sp|B1LQ65|TRUD_ECOSM tRNA pseudouridine synthase D OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=truD PE=3 SV=1
Length = 349
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 84 ILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQH-----WKWLSLPESRFPEVAEL 138
IL N F D + K + AR +S G +H W +P P+++
Sbjct: 48 ILKNGCNTRFVADALA--KFLKIHAREVSFA-GQKDKHAVTEQWLCARVPGKEMPDLSAF 104
Query: 139 KLVWCFEI-MARIETKI-LSSKTNYATYLVFKFVETREGFETRPIEFDV-----YFE--- 188
+L C + AR + K+ L + A LV + V R+ E R I+ V YF
Sbjct: 105 QLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQR 164
Query: 189 -GNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNE 228
G + AL N P+ N+R W+ FN+
Sbjct: 165 FGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQ 205
>sp|B7MZ46|TRUD_ECO81 tRNA pseudouridine synthase D OS=Escherichia coli O81 (strain ED1a)
GN=truD PE=3 SV=1
Length = 349
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 84 ILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQH-----WKWLSLPESRFPEVAEL 138
IL N F D + K + AR +S G +H W +P P+++
Sbjct: 48 ILKNGCNTRFVADALA--KFLKIHAREVSFA-GQKDKHAVTEQWLCARVPGKEMPDLSAF 104
Query: 139 KLVWCFEI-MARIETKI-LSSKTNYATYLVFKFVETREGFETRPIEFDV-----YFE--- 188
+L C + AR + K+ L + A LV + V R+ E R I+ V YF
Sbjct: 105 QLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQR 164
Query: 189 -GNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNE 228
G + AL N P+ N+R W+ FN+
Sbjct: 165 FGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQ 205
>sp|B5Z3A7|TRUD_ECO5E tRNA pseudouridine synthase D OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=truD PE=3 SV=1
Length = 349
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 84 ILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQH-----WKWLSLPESRFPEVAEL 138
IL N F D + K + AR +S G +H W +P P+++
Sbjct: 48 ILKNGCNTRFVADALA--KFLKIHAREVSFA-GQKDKHAVTEQWLCARVPGKEMPDLSAF 104
Query: 139 KLVWCFEI-MARIETKI-LSSKTNYATYLVFKFVETREGFETRPIEFDV-----YFE--- 188
+L C + AR + K+ L + A LV + V R+ E R I+ V YF
Sbjct: 105 QLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQR 164
Query: 189 -GNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNE 228
G + AL N P+ N+R W+ FN+
Sbjct: 165 FGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQ 205
>sp|Q8X7Y6|TRUD_ECO57 tRNA pseudouridine synthase D OS=Escherichia coli O157:H7 GN=truD
PE=3 SV=1
Length = 349
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 84 ILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQH-----WKWLSLPESRFPEVAEL 138
IL N F D + K + AR +S G +H W +P P+++
Sbjct: 48 ILKNGCNTRFVADALA--KFLKIHAREVSFA-GQKDKHAVTEQWLCARVPGKEMPDLSAF 104
Query: 139 KLVWCFEI-MARIETKI-LSSKTNYATYLVFKFVETREGFETRPIEFDV-----YFE--- 188
+L C + AR + K+ L + A LV + V R+ E R I+ V YF
Sbjct: 105 QLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQR 164
Query: 189 -GNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNE 228
G + AL N P+ N+R W+ FN+
Sbjct: 165 FGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQ 205
>sp|B6I6D5|TRUD_ECOSE tRNA pseudouridine synthase D OS=Escherichia coli (strain SE11)
GN=truD PE=3 SV=1
Length = 349
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 84 ILINNNTMSFALDHESGKKCYMVGARGLSITWGSSPQH-----WKWLSLPESRFPEVAEL 138
IL N F D + K + AR +S G +H W +P P+++
Sbjct: 48 ILKNGCNTRFVADALA--KFLKIHAREVSFA-GQKDKHAVTEQWLCARVPGKEMPDLSAF 104
Query: 139 KLVWCFEI-MARIETKI-LSSKTNYATYLVFKFVETREGFETRPIEFDV-----YFE--- 188
+L C + AR + K+ L + A LV + V R+ E R I+ V YF
Sbjct: 105 QLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQR 164
Query: 189 -GNDTHKMHSALLDPPANMPLLSLNRRDGWMEIGIGEFFNE 228
G + AL N P+ N+R W+ FN+
Sbjct: 165 FGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQ 205
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,158,757
Number of Sequences: 539616
Number of extensions: 4262153
Number of successful extensions: 9607
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 9507
Number of HSP's gapped (non-prelim): 72
length of query: 263
length of database: 191,569,459
effective HSP length: 115
effective length of query: 148
effective length of database: 129,513,619
effective search space: 19168015612
effective search space used: 19168015612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)