Query 024749
Match_columns 263
No_of_seqs 138 out of 1285
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 07:07:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024749.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024749hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 100.0 3E-36 6.5E-41 246.5 22.7 208 3-211 9-219 (231)
2 PRK09481 sspA stringent starva 100.0 2.7E-36 6E-41 250.5 22.7 196 3-206 10-205 (211)
3 PLN02473 glutathione S-transfe 100.0 4E-33 8.7E-38 231.8 19.9 196 1-203 1-211 (214)
4 PLN02395 glutathione S-transfe 100.0 1.7E-32 3.7E-37 228.1 20.0 197 1-205 1-212 (215)
5 PRK10542 glutathionine S-trans 100.0 2.6E-32 5.7E-37 224.6 18.1 191 4-204 1-198 (201)
6 PRK13972 GSH-dependent disulfi 100.0 2.7E-32 5.9E-37 227.1 17.5 190 4-205 2-207 (215)
7 PRK15113 glutathione S-transfe 100.0 7.2E-32 1.6E-36 224.4 19.8 194 1-206 1-211 (214)
8 PRK10357 putative glutathione 100.0 2.8E-31 6E-36 218.8 21.5 193 4-203 1-200 (202)
9 TIGR01262 maiA maleylacetoacet 100.0 1.5E-31 3.3E-36 221.6 19.2 191 5-204 1-205 (210)
10 KOG0868 Glutathione S-transfer 100.0 5.3E-32 1.1E-36 208.9 14.8 195 3-206 5-210 (217)
11 COG0625 Gst Glutathione S-tran 100.0 3.3E-31 7.2E-36 219.9 20.0 186 4-198 1-199 (211)
12 TIGR00862 O-ClC intracellular 100.0 2.5E-30 5.4E-35 216.4 22.1 193 9-213 16-231 (236)
13 PRK11752 putative S-transferas 100.0 5.7E-30 1.2E-34 219.2 21.1 199 3-206 44-261 (264)
14 PLN02378 glutathione S-transfe 100.0 1.3E-29 2.8E-34 210.7 19.0 183 9-206 17-202 (213)
15 PLN02817 glutathione dehydroge 100.0 7.7E-29 1.7E-33 211.6 20.9 182 10-206 71-254 (265)
16 PTZ00057 glutathione s-transfe 100.0 1.5E-28 3.3E-33 203.1 19.4 191 1-206 1-202 (205)
17 KOG0867 Glutathione S-transfer 100.0 7.4E-29 1.6E-33 207.5 17.2 198 3-206 2-212 (226)
18 PRK10387 glutaredoxin 2; Provi 100.0 2.4E-27 5.3E-32 196.3 16.1 179 4-197 1-207 (210)
19 KOG1695 Glutathione S-transfer 100.0 9.2E-27 2E-31 189.5 17.6 196 1-206 1-203 (206)
20 TIGR02182 GRXB Glutaredoxin, G 99.9 8.5E-26 1.8E-30 187.2 15.0 177 5-197 1-206 (209)
21 KOG4420 Uncharacterized conser 99.9 5.8E-26 1.2E-30 185.2 13.1 235 3-245 26-325 (325)
22 KOG1422 Intracellular Cl- chan 99.9 4.8E-22 1E-26 158.1 16.7 187 10-207 19-209 (221)
23 PLN02907 glutamate-tRNA ligase 99.9 4.5E-21 9.7E-26 182.6 17.3 158 1-196 1-159 (722)
24 PF13417 GST_N_3: Glutathione 99.8 2.1E-18 4.6E-23 119.5 7.9 74 6-80 1-74 (75)
25 COG0435 ECM4 Predicted glutath 99.7 2.8E-18 6.1E-23 141.7 8.0 200 3-206 51-289 (324)
26 cd03059 GST_N_SspA GST_N famil 99.7 1.3E-17 2.9E-22 114.6 9.0 73 4-77 1-73 (73)
27 cd03061 GST_N_CLIC GST_N famil 99.7 2.1E-17 4.6E-22 117.6 8.5 70 10-80 20-89 (91)
28 cd03052 GST_N_GDAP1 GST_N fami 99.7 2.3E-17 5E-22 113.6 7.8 70 4-74 1-73 (73)
29 cd03058 GST_N_Tau GST_N family 99.7 4E-17 8.7E-22 112.7 8.8 74 4-77 1-74 (74)
30 cd03041 GST_N_2GST_N GST_N fam 99.7 6.8E-17 1.5E-21 112.5 8.4 73 4-77 2-77 (77)
31 cd03060 GST_N_Omega_like GST_N 99.7 8.1E-17 1.8E-21 110.3 8.2 69 4-73 1-70 (71)
32 cd03045 GST_N_Delta_Epsilon GS 99.7 8.5E-17 1.8E-21 110.9 8.1 71 4-75 1-74 (74)
33 cd03053 GST_N_Phi GST_N family 99.7 1.8E-16 3.8E-21 109.9 8.8 71 4-75 2-75 (76)
34 cd03050 GST_N_Theta GST_N fami 99.7 2.2E-16 4.8E-21 109.5 8.9 73 4-77 1-76 (76)
35 COG2999 GrxB Glutaredoxin 2 [P 99.7 6.9E-16 1.5E-20 119.7 12.0 183 4-198 1-208 (215)
36 cd03076 GST_N_Pi GST_N family, 99.7 1.1E-16 2.3E-21 110.3 6.7 71 4-75 2-72 (73)
37 cd03185 GST_C_Tau GST_C family 99.7 1.5E-15 3.2E-20 115.5 13.0 118 88-207 2-119 (126)
38 cd03048 GST_N_Ure2p_like GST_N 99.7 4.3E-16 9.4E-21 109.4 8.8 73 4-78 2-80 (81)
39 cd03056 GST_N_4 GST_N family, 99.7 3E-16 6.5E-21 107.7 7.8 70 4-74 1-73 (73)
40 KOG2903 Predicted glutathione 99.7 1.4E-16 3E-21 130.5 6.3 200 3-206 37-291 (319)
41 cd03044 GST_N_EF1Bgamma GST_N 99.6 6E-16 1.3E-20 107.1 7.9 70 5-75 2-74 (75)
42 cd03047 GST_N_2 GST_N family, 99.6 7.3E-16 1.6E-20 106.1 7.8 70 4-74 1-73 (73)
43 cd03039 GST_N_Sigma_like GST_N 99.6 4.1E-16 8.9E-21 107.0 6.5 71 4-75 1-72 (72)
44 cd03049 GST_N_3 GST_N family, 99.6 6.3E-16 1.4E-20 106.4 7.4 70 4-74 1-73 (73)
45 cd03046 GST_N_GTT1_like GST_N 99.6 1.6E-15 3.5E-20 105.0 8.5 73 4-78 1-76 (76)
46 cd03051 GST_N_GTT2_like GST_N 99.6 9.6E-16 2.1E-20 105.4 7.1 70 4-74 1-74 (74)
47 cd03037 GST_N_GRX2 GST_N famil 99.6 1.2E-15 2.7E-20 104.4 7.6 70 4-75 1-71 (71)
48 cd03055 GST_N_Omega GST_N fami 99.6 1.4E-15 3E-20 108.9 8.1 71 3-74 18-89 (89)
49 cd03042 GST_N_Zeta GST_N famil 99.6 1.4E-15 3.1E-20 104.4 7.6 70 4-74 1-73 (73)
50 cd03057 GST_N_Beta GST_N famil 99.6 2E-15 4.4E-20 104.9 8.3 73 4-78 1-77 (77)
51 cd03186 GST_C_SspA GST_N famil 99.6 9.6E-15 2.1E-19 107.9 12.0 105 88-200 2-106 (107)
52 cd03190 GST_C_ECM4_like GST_C 99.6 1E-14 2.2E-19 113.5 11.7 124 89-213 4-129 (142)
53 PF13409 GST_N_2: Glutathione 99.6 2.7E-15 5.8E-20 102.4 7.0 65 11-76 1-70 (70)
54 cd03196 GST_C_5 GST_C family, 99.6 1.9E-14 4.1E-19 108.0 11.1 111 85-200 2-114 (115)
55 cd03075 GST_N_Mu GST_N family, 99.6 5.5E-15 1.2E-19 104.1 7.7 73 4-77 1-82 (82)
56 cd03077 GST_N_Alpha GST_N fami 99.6 7.4E-15 1.6E-19 102.7 8.2 72 3-78 1-77 (79)
57 cd03040 GST_N_mPGES2 GST_N fam 99.6 6.2E-15 1.3E-19 102.5 7.7 72 3-77 1-76 (77)
58 cd03080 GST_N_Metaxin_like GST 99.6 9.9E-15 2.1E-19 101.0 8.7 67 4-78 2-75 (75)
59 KOG4244 Failed axon connection 99.6 5.1E-14 1.1E-18 116.3 13.4 177 4-193 46-272 (281)
60 PF02798 GST_N: Glutathione S- 99.6 9.2E-15 2E-19 101.4 7.3 71 5-75 2-76 (76)
61 cd03188 GST_C_Beta GST_C famil 99.6 2.1E-14 4.6E-19 107.0 9.8 105 89-201 2-114 (114)
62 cd03184 GST_C_Omega GST_C fami 99.5 6.5E-14 1.4E-18 106.4 11.1 116 89-209 2-119 (124)
63 KOG3029 Glutathione S-transfer 99.5 2E-13 4.4E-18 113.3 13.7 183 3-194 90-355 (370)
64 cd03038 GST_N_etherase_LigE GS 99.5 2.7E-14 5.9E-19 101.0 7.5 67 10-78 14-84 (84)
65 cd03043 GST_N_1 GST_N family, 99.5 4.9E-14 1.1E-18 97.0 7.6 66 8-74 6-73 (73)
66 cd03182 GST_C_GTT2_like GST_C 99.5 2.8E-13 6.1E-18 101.5 12.1 105 86-197 1-117 (117)
67 cd00570 GST_N_family Glutathio 99.5 8.7E-14 1.9E-18 93.8 7.6 70 4-74 1-71 (71)
68 cd03198 GST_C_CLIC GST_C famil 99.5 3.6E-13 7.8E-18 102.9 10.9 103 102-207 9-128 (134)
69 cd03209 GST_C_Mu GST_C family, 99.5 5.4E-13 1.2E-17 100.8 11.4 111 89-207 2-113 (121)
70 cd03189 GST_C_GTT1_like GST_C 99.5 5.9E-13 1.3E-17 100.1 10.8 104 84-195 2-119 (119)
71 cd03187 GST_C_Phi GST_C family 99.5 5.4E-13 1.2E-17 100.0 10.4 107 89-201 2-118 (118)
72 cd03178 GST_C_Ure2p_like GST_C 99.5 1.7E-13 3.7E-18 102.0 7.3 106 89-201 1-112 (113)
73 cd03181 GST_C_EFB1gamma GST_C 99.5 4.1E-13 8.9E-18 101.5 9.4 113 89-206 1-119 (123)
74 cd03191 GST_C_Zeta GST_C famil 99.5 3.3E-13 7.2E-18 101.9 8.8 109 88-204 2-120 (121)
75 cd03203 GST_C_Lambda GST_C fam 99.4 1.3E-12 2.8E-17 98.7 11.0 110 86-207 1-115 (120)
76 cd03177 GST_C_Delta_Epsilon GS 99.4 5.5E-13 1.2E-17 100.3 8.9 106 89-201 2-110 (118)
77 cd03210 GST_C_Pi GST_C family, 99.4 1.5E-12 3.3E-17 99.1 10.7 110 89-206 3-115 (126)
78 cd03180 GST_C_2 GST_C family, 99.4 1.6E-12 3.5E-17 96.1 10.3 101 89-197 2-110 (110)
79 cd03054 GST_N_Metaxin GST_N fa 99.4 9.1E-13 2E-17 90.3 7.8 64 5-76 2-72 (72)
80 cd03207 GST_C_8 GST_C family, 99.4 5.8E-13 1.3E-17 97.6 6.6 100 95-203 3-102 (103)
81 cd03183 GST_C_Theta GST_C fami 99.4 2.2E-12 4.7E-17 98.1 9.3 105 90-201 2-120 (126)
82 cd03208 GST_C_Alpha GST_C fami 99.4 5.9E-12 1.3E-16 97.3 11.1 110 89-206 3-118 (137)
83 cd03201 GST_C_DHAR GST_C famil 99.4 8E-12 1.7E-16 94.5 10.8 100 102-206 12-113 (121)
84 cd03200 GST_C_JTV1 GST_C famil 99.4 5.3E-12 1.2E-16 91.5 9.0 96 70-194 1-96 (96)
85 PF00043 GST_C: Glutathione S- 99.3 1.1E-11 2.4E-16 89.3 7.4 74 116-195 22-95 (95)
86 cd03206 GST_C_7 GST_C family, 99.3 1.1E-11 2.4E-16 90.4 6.7 95 94-197 2-100 (100)
87 cd03195 GST_C_4 GST_C family, 99.3 3.6E-11 7.7E-16 90.0 9.5 104 88-202 2-112 (114)
88 cd03179 GST_C_1 GST_C family, 99.2 3.6E-11 7.7E-16 88.1 6.7 96 89-192 2-105 (105)
89 KOG3027 Mitochondrial outer me 99.2 3.6E-10 7.8E-15 90.1 12.6 171 11-194 33-248 (257)
90 PF13410 GST_C_2: Glutathione 99.2 4.1E-11 8.8E-16 81.2 6.3 68 118-190 2-69 (69)
91 cd03204 GST_C_GDAP1 GST_C fami 99.2 1.6E-10 3.4E-15 85.7 7.8 77 116-197 23-111 (111)
92 cd03079 GST_N_Metaxin2 GST_N f 99.1 2.4E-10 5.1E-15 78.2 7.0 58 11-75 16-73 (74)
93 cd03192 GST_C_Sigma_like GST_C 99.1 7.1E-10 1.5E-14 81.2 9.0 97 89-191 2-104 (104)
94 cd03194 GST_C_3 GST_C family, 99.1 1.2E-09 2.6E-14 81.7 10.2 71 121-202 40-113 (114)
95 PRK10638 glutaredoxin 3; Provi 99.0 1.2E-09 2.7E-14 76.8 8.1 73 1-74 1-74 (83)
96 cd00299 GST_C_family Glutathio 99.0 5.9E-10 1.3E-14 80.3 6.5 93 94-191 2-100 (100)
97 PF14497 GST_C_3: Glutathione 99.0 2.9E-10 6.3E-15 82.7 4.0 93 87-193 3-99 (99)
98 TIGR02190 GlrX-dom Glutaredoxi 99.0 1.8E-09 3.9E-14 75.3 7.6 71 3-74 9-79 (79)
99 cd03193 GST_C_Metaxin GST_C fa 99.0 1.4E-09 3.1E-14 77.3 6.5 68 122-192 19-88 (88)
100 cd03202 GST_C_etherase_LigE GS 98.9 3.5E-09 7.6E-14 80.4 7.1 69 120-194 56-124 (124)
101 cd03029 GRX_hybridPRX5 Glutare 98.9 1.7E-08 3.7E-13 68.9 8.1 71 3-74 2-72 (72)
102 cd03205 GST_C_6 GST_C family, 98.8 6.9E-08 1.5E-12 70.0 9.2 68 116-191 31-98 (98)
103 cd03078 GST_N_Metaxin1_like GS 98.7 6.2E-08 1.3E-12 66.4 7.8 59 10-76 14-72 (73)
104 cd03027 GRX_DEP Glutaredoxin ( 98.6 1.6E-07 3.4E-12 64.3 7.3 68 3-71 2-70 (73)
105 cd03197 GST_C_mPGES2 GST_C fam 98.6 1.8E-07 3.8E-12 72.5 8.3 66 123-193 80-145 (149)
106 KOG3028 Translocase of outer m 98.6 3.6E-06 7.9E-11 71.8 16.0 171 11-193 16-233 (313)
107 TIGR02196 GlrX_YruB Glutaredox 98.5 3.9E-07 8.5E-12 61.7 7.1 69 4-73 2-73 (74)
108 cd02066 GRX_family Glutaredoxi 98.5 4.3E-07 9.4E-12 61.1 7.2 69 3-72 1-70 (72)
109 cd02976 NrdH NrdH-redoxin (Nrd 98.5 3.3E-07 7.1E-12 62.0 6.4 62 3-65 1-63 (73)
110 cd03211 GST_C_Metaxin2 GST_C f 98.5 2.9E-07 6.2E-12 70.0 6.5 72 117-192 52-126 (126)
111 PRK10329 glutaredoxin-like pro 98.5 4.3E-07 9.4E-12 63.5 6.8 60 3-63 2-61 (81)
112 PF14834 GST_C_4: Glutathione 98.5 1.7E-06 3.8E-11 63.2 9.8 105 86-201 1-112 (117)
113 cd03212 GST_C_Metaxin1_3 GST_C 98.5 3.9E-07 8.4E-12 70.3 6.4 74 117-193 59-134 (137)
114 cd03418 GRX_GRXb_1_3_like Glut 98.4 1E-06 2.2E-11 60.3 7.4 71 3-74 1-73 (75)
115 TIGR02181 GRX_bact Glutaredoxi 98.3 3.2E-06 6.8E-11 58.6 7.2 71 4-75 1-72 (79)
116 COG0695 GrxC Glutaredoxin and 98.3 5.4E-06 1.2E-10 57.7 7.7 68 3-71 2-72 (80)
117 TIGR02194 GlrX_NrdH Glutaredox 98.2 2.8E-06 6.2E-11 57.9 5.8 57 4-61 1-57 (72)
118 TIGR02200 GlrX_actino Glutared 98.2 4E-06 8.7E-11 57.4 6.1 70 3-73 1-75 (77)
119 PRK11200 grxA glutaredoxin 1; 98.2 1.1E-05 2.3E-10 56.9 8.2 76 2-78 1-84 (85)
120 PF00462 Glutaredoxin: Glutare 98.0 6.9E-06 1.5E-10 53.8 4.2 59 4-63 1-60 (60)
121 cd03419 GRX_GRXh_1_2_like Glut 98.0 4.2E-05 9.2E-10 53.1 8.4 72 3-75 1-76 (82)
122 TIGR02189 GlrX-like_plant Glut 98.0 4.6E-05 1E-09 55.3 7.9 70 3-73 9-82 (99)
123 TIGR02183 GRXA Glutaredoxin, G 98.0 5.6E-05 1.2E-09 53.3 7.8 75 4-78 2-83 (86)
124 PHA03050 glutaredoxin; Provisi 97.9 9.7E-05 2.1E-09 54.5 8.5 68 3-71 14-88 (108)
125 TIGR02180 GRX_euk Glutaredoxin 97.7 0.00029 6.4E-09 48.9 8.3 71 4-75 1-77 (84)
126 TIGR00365 monothiol glutaredox 97.7 0.00025 5.4E-09 51.3 7.4 71 3-74 13-89 (97)
127 PF10568 Tom37: Outer mitochon 97.6 0.00034 7.4E-09 47.6 6.8 55 11-73 13-71 (72)
128 cd03028 GRX_PICOT_like Glutare 97.6 0.00041 8.9E-09 49.4 7.5 71 3-74 9-85 (90)
129 PRK12759 bifunctional gluaredo 97.4 0.00066 1.4E-08 61.9 8.2 70 1-71 1-79 (410)
130 KOG1147 Glutamyl-tRNA syntheta 97.2 0.00054 1.2E-08 62.7 4.7 115 59-198 44-159 (712)
131 cd03031 GRX_GRX_like Glutaredo 96.9 0.0056 1.2E-07 47.6 7.6 71 3-74 1-82 (147)
132 PF04399 Glutaredoxin2_C: Glut 96.8 0.0023 5E-08 48.7 5.0 68 120-197 57-124 (132)
133 PRK10824 glutaredoxin-4; Provi 96.6 0.014 3E-07 43.5 7.4 71 3-74 16-92 (115)
134 cd02973 TRX_GRX_like Thioredox 96.5 0.01 2.3E-07 39.2 5.8 58 3-64 2-64 (67)
135 cd03199 GST_C_GRX2 GST_C famil 96.4 0.011 2.4E-07 44.7 5.9 67 121-197 59-125 (128)
136 KOG1752 Glutaredoxin and relat 96.3 0.028 6E-07 41.0 7.4 71 3-74 15-89 (104)
137 COG4545 Glutaredoxin-related p 96.0 0.026 5.7E-07 38.0 5.4 63 1-64 1-77 (85)
138 cd03036 ArsC_like Arsenate Red 95.9 0.018 3.8E-07 42.6 4.9 34 4-37 1-34 (111)
139 PRK01655 spxA transcriptional 95.8 0.022 4.8E-07 43.5 5.3 33 4-36 2-34 (131)
140 PTZ00062 glutaredoxin; Provisi 95.8 0.046 1E-06 45.0 7.5 70 3-73 114-189 (204)
141 PRK10026 arsenate reductase; P 95.7 0.029 6.2E-07 43.3 5.6 36 1-36 1-36 (141)
142 cd02977 ArsC_family Arsenate R 95.7 0.027 5.9E-07 41.0 5.2 33 4-36 1-33 (105)
143 cd03032 ArsC_Spx Arsenate Redu 95.6 0.03 6.5E-07 41.6 5.4 33 4-36 2-34 (115)
144 PRK13344 spxA transcriptional 95.3 0.052 1.1E-06 41.5 5.7 34 4-37 2-35 (132)
145 PRK12559 transcriptional regul 95.2 0.049 1.1E-06 41.5 5.4 34 4-37 2-35 (131)
146 PF05768 DUF836: Glutaredoxin- 95.0 0.099 2.1E-06 36.2 6.1 55 3-60 1-57 (81)
147 TIGR01617 arsC_related transcr 94.8 0.043 9.4E-07 40.9 4.1 33 4-36 1-33 (117)
148 cd03033 ArsC_15kD Arsenate Red 94.5 0.098 2.1E-06 38.8 5.3 34 3-36 1-34 (113)
149 TIGR00412 redox_disulf_2 small 94.5 0.24 5.1E-06 33.8 6.8 54 4-63 3-60 (76)
150 cd03035 ArsC_Yffb Arsenate Red 94.4 0.097 2.1E-06 38.3 5.1 33 4-36 1-33 (105)
151 COG1393 ArsC Arsenate reductas 93.0 0.3 6.4E-06 36.5 5.6 32 4-35 3-34 (117)
152 cd01659 TRX_superfamily Thiore 93.0 0.26 5.6E-06 30.6 4.7 54 4-58 1-59 (69)
153 TIGR00411 redox_disulf_1 small 93.0 1 2.2E-05 30.5 8.0 57 3-61 2-62 (82)
154 TIGR01616 nitro_assoc nitrogen 92.9 0.32 6.9E-06 36.8 5.6 33 3-35 2-34 (126)
155 PRK10853 putative reductase; P 92.5 0.35 7.6E-06 36.1 5.4 32 4-35 2-33 (118)
156 PHA02125 thioredoxin-like prot 90.6 1 2.3E-05 30.3 5.7 51 4-58 2-52 (75)
157 cd03026 AhpF_NTD_C TRX-GRX-lik 90.5 0.92 2E-05 31.9 5.6 58 3-64 15-77 (89)
158 TIGR00014 arsC arsenate reduct 90.1 0.76 1.7E-05 34.0 5.0 32 4-35 1-32 (114)
159 cd03034 ArsC_ArsC Arsenate Red 89.5 0.93 2E-05 33.4 5.1 32 4-35 1-32 (112)
160 PF11801 Tom37_C: Tom37 C-term 89.3 1.3 2.8E-05 35.3 6.1 38 126-164 112-153 (168)
161 cd03030 GRX_SH3BGR Glutaredoxi 88.9 2 4.3E-05 30.5 6.2 67 4-71 2-79 (92)
162 PF13192 Thioredoxin_3: Thiore 87.4 4.3 9.4E-05 27.4 7.1 56 4-65 3-62 (76)
163 COG0278 Glutaredoxin-related p 87.4 3.2 6.9E-05 29.9 6.3 66 8-74 26-93 (105)
164 PF11287 DUF3088: Protein of u 85.0 3.9 8.5E-05 30.0 5.9 68 11-78 23-108 (112)
165 PF04908 SH3BGR: SH3-binding, 80.5 6.8 0.00015 28.2 5.8 71 1-73 1-87 (99)
166 PF03960 ArsC: ArsC family; I 71.4 5.2 0.00011 29.2 3.3 29 7-35 1-29 (110)
167 PF09635 MetRS-N: MetRS-N bind 64.0 5.3 0.00012 29.8 2.0 27 52-78 35-63 (122)
168 PF00085 Thioredoxin: Thioredo 61.7 50 0.0011 22.7 8.7 69 4-75 21-102 (103)
169 TIGR01295 PedC_BrcD bacterioci 60.0 47 0.001 24.6 6.6 32 4-35 27-62 (122)
170 KOG1668 Elongation factor 1 be 56.9 6.7 0.00015 32.7 1.6 60 128-199 10-69 (231)
171 TIGR03143 AhpF_homolog putativ 55.4 31 0.00068 32.9 6.1 57 3-63 479-540 (555)
172 PF15468 DUF4636: Domain of un 53.6 13 0.00028 30.6 2.6 25 233-257 34-58 (243)
173 TIGR02187 GlrX_arch Glutaredox 53.3 58 0.0012 26.7 6.7 53 4-58 137-192 (215)
174 cd02949 TRX_NTR TRX domain, no 53.0 73 0.0016 22.1 6.4 58 4-63 17-80 (97)
175 PRK15317 alkyl hydroperoxide r 53.0 13 0.00028 35.0 3.1 72 3-76 119-197 (517)
176 cd02947 TRX_family TRX family; 51.2 68 0.0015 21.0 6.6 54 4-61 14-74 (93)
177 TIGR03140 AhpF alkyl hydropero 49.8 14 0.0003 34.8 2.8 71 3-75 120-197 (515)
178 KOG0911 Glutaredoxin-related p 49.7 46 0.001 27.7 5.3 66 8-74 150-216 (227)
179 cd02989 Phd_like_TxnDC9 Phosdu 47.8 94 0.002 22.5 6.4 59 4-64 26-89 (113)
180 cd02953 DsbDgamma DsbD gamma f 45.7 65 0.0014 22.6 5.2 52 4-57 15-77 (104)
181 PF09868 DUF2095: Uncharacteri 43.2 15 0.00032 27.2 1.4 62 16-77 26-91 (128)
182 PF04134 DUF393: Protein of un 42.6 80 0.0017 22.7 5.4 69 6-76 1-77 (114)
183 cd02975 PfPDO_like_N Pyrococcu 41.9 35 0.00076 24.8 3.3 53 4-58 25-81 (113)
184 PF08632 Zds_C: Activator of m 38.9 27 0.00058 21.6 1.8 14 233-246 37-50 (53)
185 KOG3425 Uncharacterized conser 37.7 96 0.0021 23.3 4.9 68 9-76 42-122 (128)
186 PF01323 DSBA: DSBA-like thior 36.1 53 0.0012 25.9 3.9 36 3-38 1-41 (193)
187 COG3019 Predicted metal-bindin 36.1 1.6E+02 0.0034 22.8 5.9 74 3-77 27-104 (149)
188 cd02951 SoxW SoxW family; SoxW 35.6 1E+02 0.0022 22.4 5.1 16 4-19 18-33 (125)
189 cd02956 ybbN ybbN protein fami 34.4 95 0.0021 21.2 4.5 57 4-62 16-78 (96)
190 cd02984 TRX_PICOT TRX domain, 33.0 1.6E+02 0.0034 20.0 6.8 57 4-62 18-80 (97)
191 cd02993 PDI_a_APS_reductase PD 31.7 1.9E+02 0.004 20.5 5.8 53 4-57 25-83 (109)
192 PRK09266 hypothetical protein; 30.4 87 0.0019 26.6 4.4 56 21-77 200-258 (266)
193 cd02963 TRX_DnaJ TRX domain, D 29.5 2.1E+02 0.0046 20.4 6.3 56 4-61 28-90 (111)
194 PF07862 Nif11: Nitrogen fixat 29.3 66 0.0014 19.5 2.6 38 182-219 4-41 (49)
195 PTZ00051 thioredoxin; Provisio 27.7 2E+02 0.0044 19.5 6.5 57 4-62 22-83 (98)
196 PRK09381 trxA thioredoxin; Pro 27.5 2.2E+02 0.0048 19.9 8.4 57 4-62 25-87 (109)
197 PF09236 AHSP: Alpha-haemoglob 25.7 1.1E+02 0.0025 21.2 3.3 41 89-134 33-73 (89)
198 cd03003 PDI_a_ERdj5_N PDIa fam 25.5 2.3E+02 0.005 19.5 5.7 53 4-58 22-78 (101)
199 cd03020 DsbA_DsbC_DsbG DsbA fa 25.2 94 0.002 24.9 3.6 22 3-24 80-101 (197)
200 PTZ00443 Thioredoxin domain-co 25.0 4E+02 0.0088 22.1 9.7 73 4-78 56-140 (224)
201 PF06110 DUF953: Eukaryotic pr 24.7 69 0.0015 23.9 2.4 60 8-68 34-107 (119)
202 KOG2824 Glutaredoxin-related p 24.2 1.3E+02 0.0028 25.9 4.2 58 14-72 149-211 (281)
203 PRK10877 protein disulfide iso 23.7 66 0.0014 26.9 2.4 22 3-24 110-131 (232)
204 TIGR02187 GlrX_arch Glutaredox 23.3 3.2E+02 0.0069 22.2 6.4 53 4-58 23-83 (215)
205 KOG2456 Aldehyde dehydrogenase 23.1 3.4E+02 0.0075 25.0 6.8 161 10-195 187-360 (477)
206 PF13728 TraF: F plasmid trans 22.6 2.8E+02 0.0062 22.8 5.9 52 4-57 124-188 (215)
207 TIGR01126 pdi_dom protein disu 22.3 95 0.0021 21.2 2.7 52 4-57 17-74 (102)
208 PF13098 Thioredoxin_2: Thiore 22.3 98 0.0021 21.8 2.9 20 4-23 9-28 (112)
209 PF09849 DUF2076: Uncharacteri 22.2 4.3E+02 0.0094 22.4 7.0 67 65-139 5-71 (247)
210 cd02987 Phd_like_Phd Phosducin 21.8 4.1E+02 0.0088 21.0 6.5 59 5-66 88-151 (175)
211 cd02954 DIM1 Dim1 family; Dim1 21.7 2.3E+02 0.0051 20.8 4.7 56 6-63 20-81 (114)
212 cd02994 PDI_a_TMX PDIa family, 21.6 1.1E+02 0.0024 21.1 3.0 53 4-58 20-77 (101)
213 KOG2501 Thioredoxin, nucleored 21.3 2E+02 0.0043 22.6 4.4 33 5-37 37-77 (157)
214 PF04564 U-box: U-box domain; 20.8 2.3E+02 0.0049 18.7 4.2 25 52-77 15-39 (73)
215 PHA03075 glutaredoxin-like pro 20.5 1.8E+02 0.0038 21.7 3.7 69 1-77 1-70 (123)
216 PRK11657 dsbG disulfide isomer 20.1 83 0.0018 26.6 2.3 20 4-23 121-140 (251)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3e-36 Score=246.49 Aligned_cols=208 Identities=44% Similarity=0.790 Sum_probs=184.7
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCC-CCC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWP-QNP 81 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~-~~~ 81 (263)
+++||++..|||++|++++|.++||+|+.+..++.++++|+++.||.|++||+|+++|..+.||..|++||++.++ +++
T Consensus 9 ~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~ 88 (231)
T KOG0406|consen 9 TVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLTNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPP 88 (231)
T ss_pred eEEEEEeecChHHHHHHHHHHhcCCceEEEecCCCCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCC
Confidence 3899999999999999999999999999999999999999999997789999999999999999999999999999 589
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccC-CCccccCCCCCHHHHHHHHH
Q 024749 82 LMPNNPYDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLR-ERNFFNGDNIGLVDIAFGSM 160 (263)
Q Consensus 82 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~-~~~fl~G~~~T~ADi~l~~~ 160 (263)
++|+||.+|++++.|.++++..++.....+.....++..+.+.+++.+.|..| |+.|. +.+|+.|++++++|+++++.
T Consensus 89 iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~l-E~el~k~k~~fgG~~~G~vDi~~~p~ 167 (231)
T KOG0406|consen 89 ILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVL-EEELGKGKDFFGGETIGFVDIAIGPS 167 (231)
T ss_pred CCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH-HHHHhcCCCCCCCCCcCHhhhhHHhh
Confidence 99999999999999999999888877777766436688888999999999999 88887 88999999999999999976
Q ss_pred HHHHHHH-hhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcchHHHHH
Q 024749 161 LYWMQVI-GDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDDIWFIS 211 (263)
Q Consensus 161 l~~~~~~-~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~~~~~ 211 (263)
+.+.... ....+.+....+.+|+|.+|.++|.+++++++++++.+.+..+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~ 219 (231)
T KOG0406|consen 168 FERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFM 219 (231)
T ss_pred HHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHH
Confidence 6666433 33333445557899999999999999999999999999864433
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=2.7e-36 Score=250.45 Aligned_cols=196 Identities=23% Similarity=0.384 Sum_probs=169.1
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCCCCC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQNPL 82 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~~~l 82 (263)
.|+||+++.||+|++++++|+++|++|+.+.++..+++++|+++||. |+||+|+++|.+|+||.||++||++++|++.|
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~nP~-g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l 88 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLIDLNPY-QSVPTLVDRELTLYESRIIMEYLDERFPHPPL 88 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcccCCHHHHHhCCC-CCCCEEEECCEEeeCHHHHHHHHHHhCCCCCC
Confidence 38999999999999999999999999999999988888999999999 99999999999999999999999999998889
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHH
Q 024749 83 MPNNPYDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLY 162 (263)
Q Consensus 83 ~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~ 162 (263)
+|.++.+++++++|+.++.+.+.......... +++..+...+.+.+.++.+ |++|++++|++|+++|+||+++++.+.
T Consensus 89 ~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~l-e~~L~~~~~l~G~~~t~AD~~l~~~~~ 166 (211)
T PRK09481 89 MPVYPVARGESRLMMHRIEKDWYSLMNKIVNG-SASEADAARKQLREELLAI-APVFGEKPYFMSEEFSLVDCYLAPLLW 166 (211)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHH-HHHhccCCcccCCCccHHHHHHHHHHH
Confidence 99999999999999988876655444333332 4455677788899999999 999999999999999999999999887
Q ss_pred HHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 163 WMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
++... +.++. .+.+|+|++|++++.++|++++++...+.
T Consensus 167 ~~~~~----~~~~~-~~~~p~l~~w~~~~~~rp~~~~~~~~~~~ 205 (211)
T PRK09481 167 RLPVL----GIELS-GPGAKELKGYMTRVFERDSFLASLTEAER 205 (211)
T ss_pred HHHhc----CCCCC-CCCChhHHHHHHHHhccHHHHHHcCHHHH
Confidence 76432 44432 25799999999999999999999876433
No 3
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=4e-33 Score=231.79 Aligned_cols=196 Identities=20% Similarity=0.348 Sum_probs=161.2
Q ss_pred CceeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhC
Q 024749 1 MAEVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 1 Ms~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~ 77 (263)
|. |+||+++.||+++|++++|+++|++|+.+.++.. +++++++++||. |+||+|+++|.+++||.+|++||++.+
T Consensus 1 ~~-~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~YL~~~~ 78 (214)
T PLN02473 1 MV-VKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPF-GQVPAIEDGDLKLFESRAIARYYATKY 78 (214)
T ss_pred Cc-eEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCC-CCCCeEEECCEEEEehHHHHHHHHHHc
Confidence 64 8999999999999999999999999999988765 567889999999 999999999999999999999999999
Q ss_pred CCC--CCCCCCHHHHHHHHHHHHHHHhhhHHHHH-----HHhcc-----cChhHHHHHHHHHHHHHHHHHHcccCCCccc
Q 024749 78 PQN--PLMPNNPYDRALARFWIKFAEDKLVVAIL-----KLFRS-----ITGQELENAKKEILEILQTLEEHGLRERNFF 145 (263)
Q Consensus 78 ~~~--~l~p~~~~~~a~~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl 145 (263)
++. +|+|.++.+++++++|+.+.++.+.+... ..+.. .+....+...+++.+.++.| |+.|++++|+
T Consensus 79 ~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l 157 (214)
T PLN02473 79 ADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVY-ENRLATNRYL 157 (214)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHH-HHHhccCCcc
Confidence 753 68999999999999999988776644321 12211 12234456678889999999 9999988999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCC
Q 024749 146 NGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPN 203 (263)
Q Consensus 146 ~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~ 203 (263)
+|+++|+||+.+++.+.+....... ... .+++|+|.+|++++.++|++++++..
T Consensus 158 ~Gd~~t~ADi~~~~~~~~~~~~~~~--~~~--~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 158 GGDEFTLADLTHMPGMRYIMNETSL--SGL--VTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred cCCCCCHHHHHHHHHHHHHHhcccc--HHH--HhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 9999999999999988765321111 112 36899999999999999999998643
No 4
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=1.7e-32 Score=228.10 Aligned_cols=197 Identities=21% Similarity=0.387 Sum_probs=159.9
Q ss_pred CceeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhC
Q 024749 1 MAEVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 1 Ms~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~ 77 (263)
|+ +|||+... ++++|++++|+++|++|+.+.++.. +++++++++||. |+||+|+++|.+|+||.+|++||++++
T Consensus 1 ~~-~~ly~~~~-~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~ES~aI~~YL~~~~ 77 (215)
T PLN02395 1 MV-LKVYGPAF-ASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPF-GVVPVIVDGDYKIFESRAIMRYYAEKY 77 (215)
T ss_pred Ce-EEEEcCCc-CcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHHHc
Confidence 76 99999755 4799999999999999999988874 557899999999 999999999999999999999999999
Q ss_pred CC--CCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-----Hhc-----ccChhHHHHHHHHHHHHHHHHHHcccCCCccc
Q 024749 78 PQ--NPLMPNNPYDRALARFWIKFAEDKLVVAILK-----LFR-----SITGQELENAKKEILEILQTLEEHGLRERNFF 145 (263)
Q Consensus 78 ~~--~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl 145 (263)
++ +.++|.++.+++++++|+.+.++.+.+.+.. .+. ..+++..+...+.+.+.++.| |+.|++++|+
T Consensus 78 ~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l 156 (215)
T PLN02395 78 RSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVY-EARLSKSKYL 156 (215)
T ss_pred CCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHH-HHHhcCCccc
Confidence 75 3699999999999999999887665443321 111 112334566788899999999 9999989999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcc
Q 024749 146 NGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRD 205 (263)
Q Consensus 146 ~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~ 205 (263)
+|+++|+||+.+++.+.++... .+.. ...+.+|+|.+|++++.++|++++++.+..
T Consensus 157 ~G~~~s~ADi~l~~~~~~~~~~---~~~~-~~~~~~p~L~~w~~~~~~rp~~k~~~~~~~ 212 (215)
T PLN02395 157 AGDFVSLADLAHLPFTEYLVGP---IGKA-YLIKDRKHVSAWWDDISSRPAWKEVLAKYS 212 (215)
T ss_pred cCCCcCHHHHHHHHHHHHHhcc---cchh-hhhccCchHHHHHHHHHcChHHHHHHHHhc
Confidence 9999999999999887765210 0111 114679999999999999999999876543
No 5
>PRK10542 glutathionine S-transferase; Provisional
Probab=100.00 E-value=2.6e-32 Score=224.64 Aligned_cols=191 Identities=18% Similarity=0.367 Sum_probs=159.4
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC----CCchHHHhcCCCCCcccEEE-eCCeeecchHHHHHHHHHhCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS----NKSDLLLKYNPVHKKIPVLV-HGGKPVCESMIILEYIEEMWP 78 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~----~~~~~~~~~~P~~g~vP~L~-~~g~~l~eS~aI~~yL~~~~~ 78 (263)
|+||+...+ ++++++++|+++||+|+.+.++.. ...+++.++||. |+||+|+ ++|.+|+||.+|++||++.++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~-g~vPvL~~~~g~~l~eS~aI~~YL~~~~~ 78 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPK-GQVPALLLDDGTLLTEGVAIMQYLADSVP 78 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcC-CCCCeEEeCCCcEeecHHHHHHHHHHhCc
Confidence 589998755 799999999999999999998875 245889999999 9999998 488899999999999999998
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHHHhhhHHHHHHHhcccC-hhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHH
Q 024749 79 QNPLM-PNNPYDRALARFWIKFAEDKLVVAILKLFRSIT-GQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIA 156 (263)
Q Consensus 79 ~~~l~-p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~ 156 (263)
++.++ |.++.+++++++|+.++++.+.+.+...+.... +...+...+.+.+.++.| |+.|++++|++|+++|+||++
T Consensus 79 ~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~ADi~ 157 (201)
T PRK10542 79 DRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYV-DEALADEQWICGQRFTIADAY 157 (201)
T ss_pred ccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHH-HHHhcCCCeeeCCCCcHHhHH
Confidence 87766 677889999999999988877776655544312 222355677899999999 999998999999999999999
Q ss_pred HHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCc
Q 024749 157 FGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNR 204 (263)
Q Consensus 157 l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~ 204 (263)
+++.+.+.... +.+ .+.+|+|.+|++++.++|++++++.+.
T Consensus 158 l~~~~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~k~~~~~~ 198 (201)
T PRK10542 158 LFTVLRWAYAV----KLN---LEGLEHIAAYMQRVAERPAVAAALKAE 198 (201)
T ss_pred HHHHHHHhhcc----CCC---cccchHHHHHHHHHHcCHHHHHHHHHc
Confidence 99988776322 322 458999999999999999999987553
No 6
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=2.7e-32 Score=227.05 Aligned_cols=190 Identities=21% Similarity=0.324 Sum_probs=154.3
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEe-----CC--eeecchHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVH-----GG--KPVCESMIILEYI 73 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~-----~g--~~l~eS~aI~~yL 73 (263)
+|||+.+ +|++++|+++|+++||+|+.+.++.. ++.++|+++||. |+||+|++ +| .+|+||.||++||
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~-gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPN-NKIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcC-CCCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 7999876 79999999999999999999998875 346899999999 99999997 44 4799999999999
Q ss_pred HHhCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHH--hcc----cChhHHHHHHHHHHHHHHHHHHcccCCCccccC
Q 024749 74 EEMWPQNPLMPNNPYDRALARFWIKFAEDKLVVAILKL--FRS----ITGQELENAKKEILEILQTLEEHGLRERNFFNG 147 (263)
Q Consensus 74 ~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G 147 (263)
++.++ .+.|.++.+++++++|+.|..+.+.+.+... +.. .++...+...+.+.+.++.| |++|++++|++|
T Consensus 80 ~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G 156 (215)
T PRK13972 80 AEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVL-NKRLENSPWLGG 156 (215)
T ss_pred HHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHH-HHHhccCccccC
Confidence 99985 3678899999999999999887766544221 111 02344556677888999999 999998999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcc
Q 024749 148 DNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRD 205 (263)
Q Consensus 148 ~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~ 205 (263)
+++|+|||++++.+...... + ++.++||+|.+|+++|.++|++++++...+
T Consensus 157 d~~t~ADi~l~~~~~~~~~~----~---~~~~~~P~l~~w~~r~~~rp~~~~~~~~~~ 207 (215)
T PRK13972 157 ENYSIADIACWPWVNAWTRQ----R---IDLAMYPAVKNWHERIRSRPATGQALLKAQ 207 (215)
T ss_pred CCCCHHHHHHHHHHHHHhhc----C---CcchhCHHHHHHHHHHHhCHHHHHHHHHhc
Confidence 99999999998876543211 2 224689999999999999999999875544
No 7
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=7.2e-32 Score=224.41 Aligned_cols=194 Identities=22% Similarity=0.279 Sum_probs=158.9
Q ss_pred Cc--eeEEeccC--CChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHH
Q 024749 1 MA--EVKLHGRL--LSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYI 73 (263)
Q Consensus 1 Ms--~~~Ly~~~--~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL 73 (263)
|| .++||+.+ .||+|++++++|+++||+|+.+.++.. ++.++|+++||. |+||+|+++|.+|+||.+|++||
T Consensus 1 ~~~~~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~-g~VP~L~~~~~~l~ES~aI~~YL 79 (214)
T PRK15113 1 MSKPAITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLT-RRVPTLQHDDFELSESSAIAEYL 79 (214)
T ss_pred CCCCeEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCC-CCCCEEEECCEEEecHHHHHHHH
Confidence 56 47899975 699999999999999999999999875 356899999999 99999999999999999999999
Q ss_pred HHhCCCCC---CCCCCHHHHHHHHHHHHHHHhhhHHHHHH-----Hhcc-cChhHHHHHHHHHHHHHHHHHHcccCC-Cc
Q 024749 74 EEMWPQNP---LMPNNPYDRALARFWIKFAEDKLVVAILK-----LFRS-ITGQELENAKKEILEILQTLEEHGLRE-RN 143 (263)
Q Consensus 74 ~~~~~~~~---l~p~~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~l~~~l~~L~e~~L~~-~~ 143 (263)
++.++++. ++|.++.+++++++|+.+.++.+.+.... .+.. ..+...+...+.+.+.++.+ |+.|++ ++
T Consensus 80 ~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~ 158 (214)
T PRK15113 80 EERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVA-ERLLAPGQP 158 (214)
T ss_pred HHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHH-HHHHhcCCC
Confidence 99998765 99999999999999999997666543211 1111 12333456777889999999 999974 57
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 144 FFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 144 fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
|++|+ +|+||+++++.+.++... +.. . .|+|.+|++++.++|+|++++++.+.
T Consensus 159 ~l~G~-~TlADi~l~~~l~~~~~~----~~~---~--~p~l~~~~~r~~~rp~~~~~~~~~~~ 211 (214)
T PRK15113 159 NLFGE-WCIADTDLALMLNRLVLH----GDE---V--PERLADYATFQWQRASVQRWLALSAK 211 (214)
T ss_pred EeeCC-ccHHHHHHHHHHHHHHHc----CCC---C--CHHHHHHHHHHhcCHHHHHHHHHhhh
Confidence 99996 999999999988776322 322 1 29999999999999999998866543
No 8
>PRK10357 putative glutathione S-transferase; Provisional
Probab=100.00 E-value=2.8e-31 Score=218.83 Aligned_cols=193 Identities=27% Similarity=0.374 Sum_probs=157.9
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEE-eCCeeecchHHHHHHHHHhCCCCCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLV-HGGKPVCESMIILEYIEEMWPQNPL 82 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~-~~g~~l~eS~aI~~yL~~~~~~~~l 82 (263)
|+||++..||++++++++|+++|++|+.+.++....++++.+.||. |+||+|+ ++|.+++||.+|++||++.++++.|
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~~~~~~~~nP~-g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~l 79 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPL-GKVPALVTEEGECWFDSPIIAEYIELLNVAPAM 79 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCCCchhhhhcCCc-cCCCeEEeCCCCeeecHHHHHHHHHHhCCCCCC
Confidence 5899999999999999999999999999988876667788889999 9999998 5789999999999999999987789
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHhc---c---cChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHH
Q 024749 83 MPNNPYDRALARFWIKFAEDKLVVAILKLFR---S---ITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIA 156 (263)
Q Consensus 83 ~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~ 156 (263)
+|.++.+++++++|..+.++.+......... . ..++..+...+.+.+.|+.| |++|++++ ++|+++|+||+.
T Consensus 80 ~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l-e~~L~~~~-l~Gd~~t~ADi~ 157 (202)
T PRK10357 80 LPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDAL-EGYLVDGT-LKTDTVNLATIA 157 (202)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHH-HHhhccCc-ccCCCcCHHHHH
Confidence 9999999999999988876655443321111 1 02233456678899999999 99998878 999999999999
Q ss_pred HHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCC
Q 024749 157 FGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPN 203 (263)
Q Consensus 157 l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~ 203 (263)
+++.+.++... .. +... ..++|++.+|++++.++|+|+++.+.
T Consensus 158 l~~~l~~~~~~-~~-~~~~--~~~~p~l~~~~~~i~~rp~~~~~~~~ 200 (202)
T PRK10357 158 IACAVGYLNFR-RV-APGW--CVDRPHLVKLVENLFQRESFARTEPP 200 (202)
T ss_pred HHHHHHHHHhc-cc-Ccch--hhcChHHHHHHHHHhcChhhhhcCCC
Confidence 99988876331 11 1111 35799999999999999999998764
No 9
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=1.5e-31 Score=221.57 Aligned_cols=191 Identities=28% Similarity=0.424 Sum_probs=157.1
Q ss_pred EEeccCCChhHHHHHHHHHhcCCCceeEecCCC----CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCCC
Q 024749 5 KLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS----NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQN 80 (263)
Q Consensus 5 ~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~----~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~~ 80 (263)
+||++..||++++++++|+++||+|+.+.++.. .+.+++.++||. |+||+|+++|.+++||.+|++||++.++++
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~ 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQ-GLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCC-CcCCEEEECCEEeecHHHHHHHHHHhCCCC
Confidence 489999999999999999999999999988862 346789999998 999999999999999999999999999888
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhhHHH----HHHHhcc----cChhHHHHHHHHHHHHHHHHHHcccCC--CccccCCCC
Q 024749 81 PLMPNNPYDRALARFWIKFAEDKLVVA----ILKLFRS----ITGQELENAKKEILEILQTLEEHGLRE--RNFFNGDNI 150 (263)
Q Consensus 81 ~l~p~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~l~~~l~~L~e~~L~~--~~fl~G~~~ 150 (263)
+++|.++.+++++++|+.++++.+.+. +..++.. ......+...+.+.+.|+.| |++|++ ++|++|+++
T Consensus 80 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~~l~G~~~ 158 (210)
T TIGR01262 80 PLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAAL-EALLQPHAGAFCVGDTP 158 (210)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCEeeCCCC
Confidence 899999999999999999887554332 1112211 01222333556788999999 999975 569999999
Q ss_pred CHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCc
Q 024749 151 GLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNR 204 (263)
Q Consensus 151 T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~ 204 (263)
|+||+.+++.+.+...+ +. +.++||+|++|+++|.++|+++++..+.
T Consensus 159 T~ADi~~~~~l~~~~~~----~~---~~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 159 TLADLCLVPQVYNAERF----GV---DLTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred CHHHHHHHHHHHHHHHc----CC---CcccchHHHHHHHHHhcCHHHHHhCccc
Confidence 99999999998876322 22 2468999999999999999999998765
No 10
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.3e-32 Score=208.94 Aligned_cols=195 Identities=27% Similarity=0.430 Sum_probs=166.7
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC----CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS----NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWP 78 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~----~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~ 78 (263)
+++||+++.|..++|||++|+.+||+|+.+++++- +.+.+|.+.||+ ++||+|++||.+++||.||++||++.+|
T Consensus 5 KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm-~kVP~L~i~g~tl~eS~AII~YLeEt~P 83 (217)
T KOG0868|consen 5 KPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPM-EKVPTLVIDGLTLTESLAIIEYLEETYP 83 (217)
T ss_pred cchhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCch-hhCCeEEECCEEeehHHHHHHHHHhcCC
Confidence 78999999999999999999999999999999876 345789999999 9999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhhhHHHH----HHHhccc-ChhHHHHHHHHHHHHHHHHHHcccC--CCccccCCCCC
Q 024749 79 QNPLMPNNPYDRALARFWIKFAEDKLVVAI----LKLFRSI-TGQELENAKKEILEILQTLEEHGLR--ERNFFNGDNIG 151 (263)
Q Consensus 79 ~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~l~~~l~~L~e~~L~--~~~fl~G~~~T 151 (263)
+++|+|+|+..|+.++++...+.+.+.|.. .++.+.. .+....=+..-+.+.|..| |+.|. .++|-+||++|
T Consensus 84 ~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~AL-EklL~~~aGkycvGDevt 162 (217)
T KOG0868|consen 84 DPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTAL-EKLLKSHAGKYCVGDEVT 162 (217)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHH-HHHHHHccCCcccCceee
Confidence 999999999999999999999988876653 2233221 1112333455677889999 98896 58999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 152 LVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 152 ~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
+||+.+.+.++....+ . ++...||.+.+..+.+...|+|+.++++.++
T Consensus 163 iADl~L~pqv~nA~rf----~---vdl~PYPti~ri~e~l~elpaFq~ahP~nQP 210 (217)
T KOG0868|consen 163 IADLCLPPQVYNANRF----H---VDLTPYPTITRINEELAELPAFQAAHPDNQP 210 (217)
T ss_pred hhhhccchhhhhhhhc----c---ccCCcCchHHHHHHHHHhCHHHHhcCCCCCC
Confidence 9999999999887443 3 3468999999999999999999999988766
No 11
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.98 E-value=3.3e-31 Score=219.88 Aligned_cols=186 Identities=35% Similarity=0.616 Sum_probs=161.1
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC--CCchHHHhcCCCCCcccEEEeCCe-eecchHHHHHHHHHhCCCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS--NKSDLLLKYNPVHKKIPVLVHGGK-PVCESMIILEYIEEMWPQN 80 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~--~~~~~~~~~~P~~g~vP~L~~~g~-~l~eS~aI~~yL~~~~~~~ 80 (263)
|+||+.+.||+++++++++.++|++|+.+.++.. .+.++|+++||. |+||+|++++. +++||.+|++||++++|++
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~-gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPL-GKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCC-CCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 5899999999999999999999999999999987 578999999998 99999998665 8999999999999999987
Q ss_pred CCCCCCHH---HHHHHHHHHHHHHhhhHHHHHHHhccc-------ChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCC
Q 024749 81 PLMPNNPY---DRALARFWIKFAEDKLVVAILKLFRSI-------TGQELENAKKEILEILQTLEEHGLRERNFFNGDNI 150 (263)
Q Consensus 81 ~l~p~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~ 150 (263)
.|+|.++. +++++..|+.+....+.+.+....... +.+..+...+.+...++.+ |..|++++|++|+++
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~ 158 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALL-EALLADGPYLAGDRF 158 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHH-HHHhccCCcccCCCC
Confidence 79998875 888888999999888877775533321 3456677888999999999 999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhh
Q 024749 151 GLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIE 198 (263)
Q Consensus 151 T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~ 198 (263)
|+||+.+++.+.++... +.. .+.+|++.+|++++.++|+++
T Consensus 159 tiAD~~~~~~~~~~~~~----~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 159 TIADIALAPLLWRLALL----GEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred CHHHHHHHHHHHHhhhc----Ccc---cccChHHHHHHHHHHcCCchh
Confidence 99999999988886332 322 268999999999999999965
No 12
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.97 E-value=2.5e-30 Score=216.40 Aligned_cols=193 Identities=21% Similarity=0.329 Sum_probs=154.9
Q ss_pred cCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCC---CCCCCC
Q 024749 9 RLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQ---NPLMPN 85 (263)
Q Consensus 9 ~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~---~~l~p~ 85 (263)
...||+|++++++|.++|++|+.+.+++..++++|+++||. |+||+|+++|.+++||.+|++||++.++. +.+.|.
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~~~~fl~inP~-g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~ 94 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPEDLQNLAPG-THPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPK 94 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCCCCCHHHHHHCcC-CCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCC
Confidence 35799999999999999999999999999889999999998 99999999999999999999999999964 456677
Q ss_pred CHHHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccC------------------CCccccC
Q 024749 86 NPYDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLR------------------ERNFFNG 147 (263)
Q Consensus 86 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~------------------~~~fl~G 147 (263)
++..++... .+++.+..++....++..+...+++.+.++.| |++|+ +++|+.|
T Consensus 95 ~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L-e~~L~~~~~~~~~~~~~~~~~~~~~~f~~G 165 (236)
T TIGR00862 95 HPESNTAGL--------DIFAKFSAYIKNSNPEANDNLEKGLLKALKKL-DDYLNSPLPEEIDEDSAEDEKVSRRKFLDG 165 (236)
T ss_pred CHHHHHHHH--------HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH-HHHHhccccccccccccccccccCCCcccC
Confidence 765555321 12222222222213344455667789999999 98886 5799999
Q ss_pred CCCCHHHHHHHHHHHHHHHH-hhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcchH-HHHHhh
Q 024749 148 DNIGLVDIAFGSMLYWMQVI-GDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDDI-WFISNI 213 (263)
Q Consensus 148 ~~~T~ADi~l~~~l~~~~~~-~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~-~~~~~~ 213 (263)
+++|+|||.++|.+.++... ....+.++ .+++|+|.+|++++.++|+|+++++..+.. .++.+.
T Consensus 166 d~~tlaD~~l~p~l~~l~~~~~~~~~~~i--~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~ 231 (236)
T TIGR00862 166 DELTLADCNLLPKLHIVKVVAKKYRNFDI--PAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADV 231 (236)
T ss_pred CccchhhHHHHHHHHHHHHHHHHHhCcCc--cccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHH
Confidence 99999999999999988653 34446665 579999999999999999999999998884 444443
No 13
>PRK11752 putative S-transferase; Provisional
Probab=99.97 E-value=5.7e-30 Score=219.25 Aligned_cols=199 Identities=18% Similarity=0.245 Sum_probs=155.4
Q ss_pred eeEEeccCCChhHHHHHHHHHhc------CCCceeEecCCC---CCchHHHhcCCCCCcccEEEeC----CeeecchHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLK------GVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHG----GKPVCESMII 69 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~------gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~----g~~l~eS~aI 69 (263)
.|+||+.. ||+++||+++|+++ |++|+.+.++.. +..++|+++||. |+||+|+++ +.+|+||.+|
T Consensus 44 ~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~-GkVP~Lv~~dg~~~~~L~ES~AI 121 (264)
T PRK11752 44 PLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPN-SKIPALLDRSGNPPIRVFESGAI 121 (264)
T ss_pred CeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCC-CCCCEEEeCCCCCCeEEEcHHHH
Confidence 38999974 99999999999997 899999988875 457899999999 999999974 3689999999
Q ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHhhhH---HHHHHHhc--cc-ChhHHHHHHHHHHHHHHHHHHcccCCCc
Q 024749 70 LEYIEEMWPQNPLMPNNPYDRALARFWIKFAEDKLV---VAILKLFR--SI-TGQELENAKKEILEILQTLEEHGLRERN 143 (263)
Q Consensus 70 ~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~--~~-~~~~~~~~~~~l~~~l~~L~e~~L~~~~ 143 (263)
++||++.++ +|+|.++.+++++++|+.+..+.+. ..+...+. .. .+...++..+++.+.|+.| |+.|++++
T Consensus 122 l~YL~~~~~--~L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l-e~~L~~~~ 198 (264)
T PRK11752 122 LLYLAEKFG--AFLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVL-DKQLAEHE 198 (264)
T ss_pred HHHHHHhcC--CcCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHH-HHHhccCC
Confidence 999999987 3899999999999999998765431 11112221 10 1223455667788999999 99999899
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 144 FFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 144 fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
|++|+++|+|||++++.+.++............+.+.||+|.+|+++|.++|+++++...+..
T Consensus 199 fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~~~ 261 (264)
T PRK11752 199 YIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVNRT 261 (264)
T ss_pred CCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhcccc
Confidence 999999999999999887766321100011122356899999999999999999998876554
No 14
>PLN02378 glutathione S-transferase DHAR1
Probab=99.97 E-value=1.3e-29 Score=210.70 Aligned_cols=183 Identities=25% Similarity=0.398 Sum_probs=144.9
Q ss_pred cCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCCCCCCCCCHH
Q 024749 9 RLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQNPLMPNNPY 88 (263)
Q Consensus 9 ~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~~~l~p~~~~ 88 (263)
+..||+|+|++++|+++|++|+.+.+++..++++|+++||. |+||+|+++|.+++||.+|++||++++++..+ .++.
T Consensus 17 ~~~~p~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~l~inP~-G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l--~~~~ 93 (213)
T PLN02378 17 LGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQ-GKVPVLKIDDKWVTDSDVIVGILEEKYPDPPL--KTPA 93 (213)
T ss_pred CCCCcchHHHHHHHHHcCCCCeEEEeCcccCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHhCCCCCC--CCHH
Confidence 44699999999999999999999999998888999999999 99999999999999999999999999987655 3566
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccC--CCccccCCCCCHHHHHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLR--ERNFFNGDNIGLVDIAFGSMLYWMQV 166 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~--~~~fl~G~~~T~ADi~l~~~l~~~~~ 166 (263)
++++++..+ ...+..++.. ....+...+.+.+.|+.| |+.|+ +++|++|+++|+||+++++.+.++..
T Consensus 94 ~~a~i~~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~l~~l-e~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~ 163 (213)
T PLN02378 94 EFASVGSNI-------FGTFGTFLKS--KDSNDGSEHALLVELEAL-ENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQV 163 (213)
T ss_pred HHHHHHHHH-------HHHHHHHHhc--CChhhHHHHHHHHHHHHH-HHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHH
Confidence 777665432 2222222222 112234456778889999 99997 57999999999999999999887643
Q ss_pred Hhh-hccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 167 IGD-VVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 167 ~~~-~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
... ..+.+. .+.+|+|++|+++|.++|+++++......
T Consensus 164 ~~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~~~~~~~~~ 202 (213)
T PLN02378 164 ALGHFKSWSV--PESFPHVHNYMKTLFSLDSFEKTKTEEKY 202 (213)
T ss_pred HHHHhcCCCc--hhHhHHHHHHHHHHhcCCCeecccCChHH
Confidence 211 112222 36899999999999999999999888766
No 15
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.97 E-value=7.7e-29 Score=211.57 Aligned_cols=182 Identities=25% Similarity=0.444 Sum_probs=145.6
Q ss_pred CCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCCCCCCCCCHHH
Q 024749 10 LLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQNPLMPNNPYD 89 (263)
Q Consensus 10 ~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~~~l~p~~~~~ 89 (263)
..||+|++++++|+++|++|+.+.+++..+++||+++||. |+||+|+++|.+++||.+|++||++.++++.+. ++.+
T Consensus 71 g~cp~s~rV~i~L~ekgi~ye~~~vdl~~~~~~fl~iNP~-GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~--~~~e 147 (265)
T PLN02817 71 GDCPFCQRVLLTLEEKHLPYDMKLVDLTNKPEWFLKISPE-GKVPVVKLDEKWVADSDVITQALEEKYPDPPLA--TPPE 147 (265)
T ss_pred CCCcHHHHHHHHHHHcCCCCEEEEeCcCcCCHHHHhhCCC-CCCCEEEECCEEEecHHHHHHHHHHHCCCCCCC--CHHH
Confidence 3599999999999999999999999998889999999999 999999998899999999999999999987664 5678
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccC-CCccccCCCCCHHHHHHHHHHHHHHHH-
Q 024749 90 RALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLR-ERNFFNGDNIGLVDIAFGSMLYWMQVI- 167 (263)
Q Consensus 90 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~-~~~fl~G~~~T~ADi~l~~~l~~~~~~- 167 (263)
++.++.++. +.+..++...++ .+...+.+.+.++.| |++|+ +++|++|+++|+||+++++.+.++...
T Consensus 148 ra~i~~~l~-------~~~~~~~~~~~~--~~~~~~~l~~~l~~L-E~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~ 217 (265)
T PLN02817 148 KASVGSKIF-------STFIGFLKSKDP--GDGTEQALLDELTSF-DDYIKENGPFINGEKISAADLSLGPKLYHLEIAL 217 (265)
T ss_pred HHHHHHHHH-------HHHHHHhccCCc--chHHHHHHHHHHHHH-HHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 888766542 122222222122 123345678889999 99997 479999999999999999998877432
Q ss_pred hhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 168 GDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 168 ~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
....+.++ .+.+|+|.+|++++.++|+|+++.+..+.
T Consensus 218 ~~~~~~~i--~~~~P~L~~w~~ri~~rps~~~~~~~~~~ 254 (265)
T PLN02817 218 GHYKNWSV--PDSLPFVKSYMKNIFSMESFVKTRALPED 254 (265)
T ss_pred HHhcCCCc--cccCHHHHHHHHHHhcchhHhhcCCCHHH
Confidence 22223333 46899999999999999999999987665
No 16
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.96 E-value=1.5e-28 Score=203.06 Aligned_cols=191 Identities=19% Similarity=0.195 Sum_probs=142.8
Q ss_pred Cc-eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHH--------hcCCCCCcccEEEeCCeeecchHHHHH
Q 024749 1 MA-EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLL--------KYNPVHKKIPVLVHGGKPVCESMIILE 71 (263)
Q Consensus 1 Ms-~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~--------~~~P~~g~vP~L~~~g~~l~eS~aI~~ 71 (263)
|+ +++||+++.+++++++|++|+++|++|+.+.++. .. +++. +.||. |+||+|+++|.+++||.||++
T Consensus 1 m~~~~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~-~~-~~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~eS~AI~~ 77 (205)
T PTZ00057 1 MAEEIVLYYFDARGKAELIRLIFAYLGIEYTDKRFGE-NG-DAFIEFKNFKKEKDTPF-EQVPILEMDNIIFAQSQAIVR 77 (205)
T ss_pred CCCceEEEecCCCcchHHHHHHHHHcCCCeEEEeccc-cc-hHHHHHHhccccCCCCC-CCCCEEEECCEEEecHHHHHH
Confidence 66 6899999999999999999999999999987753 22 2332 47999 999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCC--CccccCCC
Q 024749 72 YIEEMWPQNPLMPNNPYDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRE--RNFFNGDN 149 (263)
Q Consensus 72 yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~--~~fl~G~~ 149 (263)
||+++++ +.+.+..++++++.+.....+........... .+...+...+.+.+.++.| |+.|++ ++|++|++
T Consensus 78 YLa~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~~l~Gd~ 151 (205)
T PTZ00057 78 YLSKKYK---ICGESELNEFYADMIFCGVQDIHYKFNNTNLF--KQNETTFLNEELPKWSGYF-ENILKKNHCNYFVGDN 151 (205)
T ss_pred HHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHH--HHHHHHHHHHHHHHHHHHH-HHHHHhCCCCeeeCCc
Confidence 9999997 45666555555554433222221111110110 1223344567888999999 999964 38999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 150 IGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 150 ~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
+|+||+.+++.+.++... .+ .+.++||+|.+|++++.++|++++++.++..
T Consensus 152 ~T~AD~~l~~~~~~~~~~---~~---~~l~~~P~l~~~~~r~~~~P~~k~y~~~~~~ 202 (205)
T PTZ00057 152 LTYADLAVFNLYDDIETK---YP---NSLKNFPLLKAHNEFISNLPNIKNYISNRKE 202 (205)
T ss_pred ccHHHHHHHHHHHHHHHh---Ch---hhhccChhHHHHHHHHHhChHHHHHHHhCCC
Confidence 999999999988776321 12 1246999999999999999999999877653
No 17
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=7.4e-29 Score=207.47 Aligned_cols=198 Identities=28% Similarity=0.458 Sum_probs=169.2
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCC-
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWP- 78 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~- 78 (263)
.++||++..+|.++++.+.+.++|++|+.+.++.. ++.++|+++||. |+||+|+++|..++||.||+.||.++|.
T Consensus 2 ~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~-~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~ 80 (226)
T KOG0867|consen 2 KLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPL-GKVPALEDGGLTLWESHAILRYLAEKYGP 80 (226)
T ss_pred CceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcC-CCCCeEecCCeEEeeHHHHHHHHHHHcCC
Confidence 38999999999999999999999999999977765 889999999999 8999999999999999999999999996
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHHHhhhHHHH--HHHhcc------cChhHHHHHHHHHHHHHHHHHHcccCCCccccCCC
Q 024749 79 QNP-LMPNNPYDRALARFWIKFAEDKLVVAI--LKLFRS------ITGQELENAKKEILEILQTLEEHGLRERNFFNGDN 149 (263)
Q Consensus 79 ~~~-l~p~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~ 149 (263)
... ++|++..+++.+++|+.+.++.+.+.. +.++.. .+.....+..+.+.+.++.+ |.+|.++.|+.|++
T Consensus 81 ~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~l~~~~yl~g~~ 159 (226)
T KOG0867|consen 81 LGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNL-ERFLKTQVYLAGDQ 159 (226)
T ss_pred CCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHH-HHHHccCCcccCCc
Confidence 334 899999999999999999998887763 232222 26677788899999999999 99999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 150 IGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 150 ~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
+|+||+.+.+.+..+.. ...+. ...+++|++.+|++++.++|+++++......
T Consensus 160 ~tlADl~~~~~~~~~~~--~~~~~--~~~~~~p~v~~W~~~~~~~P~~~e~~~~~~~ 212 (226)
T KOG0867|consen 160 LTLADLSLASTLSQFQG--KFATE--KDFEKYPKVARWYERIQKRPAYEEANEKGAA 212 (226)
T ss_pred ccHHHHHHhhHHHHHhH--hhhhh--hhhhhChHHHHHHHHHHhCccHHHHHHHHHH
Confidence 99999999998887631 11111 2368999999999999999998887654333
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.95 E-value=2.4e-27 Score=196.34 Aligned_cols=179 Identities=19% Similarity=0.226 Sum_probs=137.8
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEE-eCCeeecchHHHHHHHHHhCCCCCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLV-HGGKPVCESMIILEYIEEMWPQNPL 82 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~-~~g~~l~eS~aI~~yL~~~~~~~~l 82 (263)
|+||++..||+|++++++|+++|++|+.+.++..... .-.+.||. |+||+|+ ++|.+++||.+|++||+++||++.+
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~~~-~~~~~~p~-~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~l 78 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLANDDEA-TPIRMIGQ-KQVPILQKDDGSYMPESLDIVHYIDELDGKPLL 78 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCchh-hHHHhcCC-cccceEEecCCeEecCHHHHHHHHHHhCCCccC
Confidence 5899999999999999999999999999888654322 22578998 8999995 7899999999999999999987555
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHhccc------Chh---------------------HHHHHHHHHHHHHHHHH
Q 024749 83 MPNNPYDRALARFWIKFAEDKLVVAILKLFRSI------TGQ---------------------ELENAKKEILEILQTLE 135 (263)
Q Consensus 83 ~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~------~~~---------------------~~~~~~~~l~~~l~~L~ 135 (263)
.+ .+++.+++|+++....+...+...+... .+. ..+...+++.+.|+.+
T Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l- 154 (210)
T PRK10387 79 TG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRAL- 154 (210)
T ss_pred CC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHH-
Confidence 32 2567888888877655543332211100 000 1135577889999999
Q ss_pred HcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhh
Q 024749 136 EHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEI 197 (263)
Q Consensus 136 e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~ 197 (263)
|++|++ +|++|+++|+||+++++.+.++.... + ...+|+|.+|++||.++|++
T Consensus 155 e~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~---~-----~~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 155 DPLIVK-PNAVNGELSTDDIHLFPILRNLTLVK---G-----IEWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHHhcC-ccccCCCCCHHHHHHHHHHhcceeec---C-----CCCCHHHHHHHHHHHHHhCC
Confidence 999986 99999999999999999998874321 2 12469999999999999876
No 19
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=9.2e-27 Score=189.45 Aligned_cols=196 Identities=19% Similarity=0.259 Sum_probs=160.8
Q ss_pred CceeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCCC
Q 024749 1 MAEVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQN 80 (263)
Q Consensus 1 Ms~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~~ 80 (263)
|..++|+|++..++++.+|+++++.|++|+...+...+.-+......|+ |++|+|..||..+.||.||++||+++++
T Consensus 1 m~~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~w~~~K~~~pf-gqlP~l~vDg~~i~QS~AI~RyLArk~g-- 77 (206)
T KOG1695|consen 1 MPPYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDAWEELKDKMPF-GQLPVLEVDGKKLVQSRAILRYLARKFG-- 77 (206)
T ss_pred CCceEEEecCcchhHHHHHHHHHhcCCCcceeeeccccchhhhcccCCC-CCCCEEeECCEeeccHHHHHHHHHHHhC--
Confidence 7789999999999999999999999999999999876532233445798 9999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHhccc----ChhHHH-HHHHHHHHHHHHHHHcccC--CCccccCCCCCHH
Q 024749 81 PLMPNNPYDRALARFWIKFAEDKLVVAILKLFRSI----TGQELE-NAKKEILEILQTLEEHGLR--ERNFFNGDNIGLV 153 (263)
Q Consensus 81 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~l~~~l~~L~e~~L~--~~~fl~G~~~T~A 153 (263)
+.|+++.|++++|.+.+...+.....++..+... .+...+ .........+..+ ++.|+ ++.||+||++|+|
T Consensus 78 -l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~-~~~L~~~~sgflvGd~lT~a 155 (206)
T KOG1695|consen 78 -LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKIL-EKILKKNKSGFLVGDKLTWA 155 (206)
T ss_pred -cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHH-HHHHHhCCCCeeecCcccHH
Confidence 9999999999999999988777666454433321 122222 4566777788888 88886 5689999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 154 DIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 154 Di~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
|+.++..+..+... +..+. .+.+|+|.++.+++.++|.+++++.++..
T Consensus 156 Dl~i~e~l~~l~~~---~~~~~--~~~~P~L~a~~~kv~~~p~ik~~i~~r~~ 203 (206)
T KOG1695|consen 156 DLVIAEHLDTLEEL---LDPSA--LDHFPKLKAFKERVSSIPNIKKYLESRPV 203 (206)
T ss_pred HHHHHHHHHHHHHh---cCchh--hccChHHHHHHHHHhcCchHHHHHhcCCC
Confidence 99999988877442 24444 56889999999999999999999887654
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.94 E-value=8.5e-26 Score=187.19 Aligned_cols=177 Identities=19% Similarity=0.258 Sum_probs=132.5
Q ss_pred EEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEE-eCCeeecchHHHHHHHHHhCCCCCCC
Q 024749 5 KLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLV-HGGKPVCESMIILEYIEEMWPQNPLM 83 (263)
Q Consensus 5 ~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~-~~g~~l~eS~aI~~yL~~~~~~~~l~ 83 (263)
+||++..||+|++++++|.++|++|+.+.+.... .....+.||. |+||+|+ ++|.+++||.+|++||++++|.+.+.
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~~-~~~~~~~np~-g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~~~ 78 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLNDD-EETPIRMIGA-KQVPILQKDDGRAMPESLDIVAYFDKLDGEPLLT 78 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCCc-chhHHHhcCC-CCcceEEeeCCeEeccHHHHHHHHHHhCCCccCC
Confidence 5899999999999999999999999988775443 2334789998 9999998 78999999999999999999865443
Q ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHhccc----------------ChhH-----------HHHHHHHHHHHHHHHHH
Q 024749 84 PNNPYDRALARFWIKFAEDKLVVAILKLFRSI----------------TGQE-----------LENAKKEILEILQTLEE 136 (263)
Q Consensus 84 p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~-----------~~~~~~~l~~~l~~L~e 136 (263)
|. +++++++|+.+....+...+...+... ..+. .++..+.+.+.|+.+ |
T Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l-e 154 (209)
T TIGR02182 79 GK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEEL-D 154 (209)
T ss_pred CC---ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHH-H
Confidence 32 455677777765554433332111100 0000 135567889999999 9
Q ss_pred cccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCCh-HHHHHHHHHhcChhh
Q 024749 137 HGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFP-SLHTWFENFKQVPEI 197 (263)
Q Consensus 137 ~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p-~L~~w~~~~~~~p~~ 197 (263)
++|++++|+.| ++|+||+++++.+.++... + ...+| +|.+|++||++++.+
T Consensus 155 ~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~----~-----~~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 155 KLIDGPNAVNG-ELSEDDILVFPLLRNLTLV----A-----GINWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHhCccccCC-CCCHHHHHHHHHhcCeeee----c-----CCCCChHHHHHHHHHHHHhCC
Confidence 99999999955 6999999999998876321 1 11356 999999999998765
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.94 E-value=5.8e-26 Score=185.17 Aligned_cols=235 Identities=18% Similarity=0.289 Sum_probs=167.3
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQ 79 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~ 79 (263)
.+.||.++.|--+|+||++++++||+|+...|++. +.++||...||. |.||+|+++..+|.++..|++|+++.|.+
T Consensus 26 ~~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~-gevPVl~~g~~II~d~tqIIdYvErtf~g 104 (325)
T KOG4420|consen 26 SLVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPG-GEVPVLIHGDNIISDYTQIIDYVERTFTG 104 (325)
T ss_pred cceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCC-CCCceEecCCeecccHHHHHHHHHHhhcc
Confidence 37899999998899999999999999999888876 778999999998 99999999999999999999999999954
Q ss_pred -CCCCCC-CHHHHHHHHHHHHHH---------Hh-----h-----hHHHH---HHHh-----------------------
Q 024749 80 -NPLMPN-NPYDRALARFWIKFA---------ED-----K-----LVVAI---LKLF----------------------- 112 (263)
Q Consensus 80 -~~l~p~-~~~~~a~~~~~~~~~---------~~-----~-----~~~~~---~~~~----------------------- 112 (263)
..|.|. +..+..++....... .+ . ..|.. +...
T Consensus 105 er~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~ 184 (325)
T KOG4420|consen 105 ERVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYL 184 (325)
T ss_pred cccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHH
Confidence 456664 221222211111100 00 0 00000 1000
Q ss_pred -----------cccChhHHHHHHHHHHHHHHHHHHcccCC----CccccCCCCCHHHHHHHHHHHHHHHHhhhccccccC
Q 024749 113 -----------RSITGQELENAKKEILEILQTLEEHGLRE----RNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFD 177 (263)
Q Consensus 113 -----------~~~~~~~~~~~~~~l~~~l~~L~e~~L~~----~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~ 177 (263)
..-+........+.+...|+.. |.-|.+ ..||+|+++|+|||.+.++|+++..+.-. ..-..
T Consensus 185 akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~V-EteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e--~~yw~ 261 (325)
T KOG4420|consen 185 AKQKKLMAKLLEHDDVSYLKKILDELAMVLDQV-ETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLE--KKYWE 261 (325)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccH--HHhcc
Confidence 0002233345566777777888 777765 68999999999999999999999765211 11122
Q ss_pred CCCChHHHHHHHHHhcChhhhhhCCCcchHHHHHhhhhcCCCCcccccceEEEeehhHHHHHHHHHHH
Q 024749 178 SHKFPSLHTWFENFKQVPEIEENFPNRDDIWFISNIAVNSGWPLIECSSIKFVCVSHFVLVLFMYWCL 245 (263)
Q Consensus 178 ~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (263)
-.+.|+|.+|++++++|++|++++++.-...-...... ..+.---..+.+++.+++++|+||++
T Consensus 262 ~gsrpnle~Yf~rvrrR~sf~kvlg~~fnilr~~~~~~----ktp~~~~~~~l~g~lg~~~y~af~~~ 325 (325)
T KOG4420|consen 262 DGSRPNLESYFERVRRRFSFRKVLGDIFNILRFRLVKR----KTPSFFGASFLMGSLGGMGYFAFWYL 325 (325)
T ss_pred cCCCccHHHHHHHHHhhhHHHHhhhhHHHHHHHHHHHh----cCchhhhHHHHHHHhhhhHHHHHhcC
Confidence 35889999999999999999999998877422121111 12223456788999999999999973
No 22
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.89 E-value=4.8e-22 Score=158.05 Aligned_cols=187 Identities=26% Similarity=0.392 Sum_probs=154.1
Q ss_pred CCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCCCCCCCCCHHH
Q 024749 10 LLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQNPLMPNNPYD 89 (263)
Q Consensus 10 ~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~~~l~p~~~~~ 89 (263)
-.||+||++.+.|.++|++|+++.|++..+++|++++.|. |++|+|..|+..++||..|.++|++.++++.+.--++.|
T Consensus 19 Gdcpf~qr~~m~L~~k~~~f~vttVd~~~kp~~f~~~sp~-~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~E 97 (221)
T KOG1422|consen 19 GDCPFCQRLFMTLELKGVPFKVTTVDLSRKPEWFLDISPG-GKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPPE 97 (221)
T ss_pred CCChhHHHHHHHHHHcCCCceEEEeecCCCcHHHHhhCCC-CCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCHH
Confidence 3699999999999999999999999999999999999998 999999999999999999999999999877654322223
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCC---CccccCCCCCHHHHHHHHHHHHHHH
Q 024749 90 RALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRE---RNFFNGDNIGLVDIAFGSMLYWMQV 166 (263)
Q Consensus 90 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~---~~fl~G~~~T~ADi~l~~~l~~~~~ 166 (263)
.+-+ ...++..+..+..+..+...+...+.+...|..| +++|+. ++||.||++|.||+.++|-|+.++.
T Consensus 98 ~asa-------g~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~L-d~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~v 169 (221)
T KOG1422|consen 98 SASA-------GSDIFAKFSAFIKKSKDAANDGLEKALLKELEKL-DDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKV 169 (221)
T ss_pred HHhh-------HHHHHHHHHHHHhCchhhccchHHHHHHHHHHHH-HHHhcCccCCccccCCeeeeehhhhchhHHHHHH
Confidence 3322 1223333444433324445666778889999999 999984 8999999999999999999999955
Q ss_pred H-hhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcchH
Q 024749 167 I-GDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDDI 207 (263)
Q Consensus 167 ~-~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~ 207 (263)
. ..+.+.++ .+.++++++|++.+.++++|..+.+..+..
T Consensus 170 a~k~yk~~~I--P~~lt~V~rYl~~~ya~d~F~~tcp~d~ei 209 (221)
T KOG1422|consen 170 AAKHYKNFEI--PASLTGVWRYLKNAYARDEFTNTCPADQEI 209 (221)
T ss_pred HHHHhcCCCC--chhhhHHHHHHHHHHhHHHhhcCCchHHHH
Confidence 4 55567777 679999999999999999999999998884
No 23
>PLN02907 glutamate-tRNA ligase
Probab=99.87 E-value=4.5e-21 Score=182.60 Aligned_cols=158 Identities=22% Similarity=0.278 Sum_probs=130.2
Q ss_pred CceeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEe-CCeeecchHHHHHHHHHhCCC
Q 024749 1 MAEVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH-GGKPVCESMIILEYIEEMWPQ 79 (263)
Q Consensus 1 Ms~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~-~g~~l~eS~aI~~yL~~~~~~ 79 (263)
|+ ++||+.+.+ .+.++.++|++.|++|+... .+|. |+||+|++ +|.+++||.||++||++.+++
T Consensus 1 ~~-~kLy~~~~S-~~~~v~~~L~~lgv~~e~~~------------~~p~-GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~ 65 (722)
T PLN02907 1 ME-AKLSFPPDS-PPLAVIAAAKVAGVPLTIDP------------SLKS-GSAPTLLFSSGEKLTGTNVLLRYIARSASL 65 (722)
T ss_pred Ce-EEEEECCCC-ChHHHHHHHHHcCCCcEEee------------cCCC-CCCcEEEECCCCEEECHHHHHHHHHHhCCC
Confidence 78 999998877 47789999999999999864 2577 99999995 888999999999999999988
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHH
Q 024749 80 NPLMPNNPYDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGS 159 (263)
Q Consensus 80 ~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~ 159 (263)
+.|+|.++.+++++++|+.+..... .. ..+.+.++.| |.+|++++||+|+++|+||+++++
T Consensus 66 ~~L~p~d~~erAqV~qWL~~~~~~~-----------~~-------~~l~~~L~~L-E~~L~~rtYLvGd~lTLADIaL~~ 126 (722)
T PLN02907 66 PGFYGQDAFESSQVDEWLDYAPTFS-----------SG-------SEFENACEYV-DGYLASRTFLVGYSLTIADIAIWS 126 (722)
T ss_pred cCCCCCCHHHHHHHHHHHHHHhhcc-----------cH-------HHHHHHHHHH-HHHhccCCeecCCCCCHHHHHHHH
Confidence 8899999999999999999875421 00 1356678999 999999999999999999999998
Q ss_pred HHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChh
Q 024749 160 MLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPE 196 (263)
Q Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~ 196 (263)
.+..... .. .+... .+.+|+|.+|++++.++|+
T Consensus 127 ~L~~~~~-~~-~~~~~--~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 127 GLAGSGQ-RW-ESLRK--SKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHhhhh-hh-hcccc--cccCHHHHHHHHHHHhCCC
Confidence 8755411 00 01111 4689999999999999999
No 24
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.76 E-value=2.1e-18 Score=119.47 Aligned_cols=74 Identities=43% Similarity=0.660 Sum_probs=70.8
Q ss_pred EeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCCC
Q 024749 6 LHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQN 80 (263)
Q Consensus 6 Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~~ 80 (263)
||++..||+|+|++++|+++||+|+.+.++..++.+++.+.||. |+||+|+++|.+++||.+|++||+++++++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~~~~~~~~~p~-~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPEEKRPEFLKLNPK-GKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTTSTSHHHHHHSTT-SBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCcccchhHHHhhccc-ccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 89999999999999999999999999999988888999999998 999999999999999999999999999864
No 25
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=2.8e-18 Score=141.69 Aligned_cols=200 Identities=22% Similarity=0.269 Sum_probs=155.2
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCC--ceeEecCCC--CCc----------------------hHHHhcCCCCC---cc
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVP--YEFVAEDLS--NKS----------------------DLLLKYNPVHK---KI 53 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~--~~~~~v~~~--~~~----------------------~~~~~~~P~~g---~v 53 (263)
.+.||....|||++|..+.=+++|++ .....+... .+. +-|.+..|.|. +|
T Consensus 51 RYhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTV 130 (324)
T COG0435 51 RYHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTV 130 (324)
T ss_pred eEEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeE
Confidence 47899999999999999999999997 222322221 111 12222233211 89
Q ss_pred cEEEe---CCeeecchHHHHHHHHHhCC-----CCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-HhcccChhHHHHHH
Q 024749 54 PVLVH---GGKPVCESMIILEYIEEMWP-----QNPLMPNNPYDRALARFWIKFAEDKLVVAILK-LFRSITGQELENAK 124 (263)
Q Consensus 54 P~L~~---~g~~l~eS~aI~~yL~~~~~-----~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 124 (263)
|+|.| ...+..||..|++.+...|. ...|+|.+ .+.+++.+.+++.+.+...+++ -|.. .+++.+++.
T Consensus 131 PVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk~GFA~-tq~aYeea~ 207 (324)
T COG0435 131 PVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEA--LRTEIDELNKWIYDTVNNGVYKAGFAT-TQEAYEEAV 207 (324)
T ss_pred EEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHH--HHHHHHHHHhhhcccccCceeeecccc-hHHHHHHHH
Confidence 99997 34678999999999987663 23688887 7899999999998877776654 3444 788899999
Q ss_pred HHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHH-HhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCC
Q 024749 125 KEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQV-IGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPN 203 (263)
Q Consensus 125 ~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~-~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~ 203 (263)
+.+.+.|++| |..|++++||+|+++|-||+.++++|.++.. +-..+..+.-...+||+|..|+..+.++|.|++|..=
T Consensus 208 ~~lF~~Ld~l-E~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~df 286 (324)
T COG0435 208 KKLFEALDKL-EQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETVDF 286 (324)
T ss_pred HHHHHHHHHH-HHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCcccccccch
Confidence 9999999999 9999999999999999999999999998843 2333556655556799999999999999999999765
Q ss_pred cch
Q 024749 204 RDD 206 (263)
Q Consensus 204 ~~~ 206 (263)
.+.
T Consensus 287 ~hI 289 (324)
T COG0435 287 DHI 289 (324)
T ss_pred hHh
Confidence 555
No 26
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.74 E-value=1.3e-17 Score=114.63 Aligned_cols=73 Identities=32% Similarity=0.420 Sum_probs=69.0
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~ 77 (263)
|+||+.+.||+|++++++|+++|++|+.+.++..++.+++++.||. |++|+|+++|..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPDNPPEDLAELNPY-GTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCCCCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999999988878999999998 999999999999999999999999864
No 27
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.72 E-value=2.1e-17 Score=117.57 Aligned_cols=70 Identities=27% Similarity=0.368 Sum_probs=66.3
Q ss_pred CCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCCC
Q 024749 10 LLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQN 80 (263)
Q Consensus 10 ~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~~ 80 (263)
..||||+|+|++|+++||+|+.+.+++.++++||+++||. |+||+|+++|.+++||.+|++||++.++.+
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p~~~~~~nP~-g~vPvL~~~~~~i~eS~~I~eYLde~~~~~ 89 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMKRKPEDLKDLAPG-TQPPFLLYNGEVKTDNNKIEEFLEETLCPP 89 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCCCCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHHccCC
Confidence 4799999999999999999999999999999999999998 999999999999999999999999998643
No 28
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.72 E-value=2.3e-17 Score=113.61 Aligned_cols=70 Identities=26% Similarity=0.445 Sum_probs=65.1
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++||+++.||+|++++++|+++|++|+.+.++.. ++.+++.++||. |+||+|+++|.+++||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~-g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPT-GEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 4799999999999999999999999999988774 567899999999 999999999999999999999985
No 29
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.72 E-value=4e-17 Score=112.68 Aligned_cols=74 Identities=72% Similarity=1.171 Sum_probs=68.2
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~ 77 (263)
|+||+++.||+|++++++|+++|++|+.+.++...+++++.+.||.+|++|+|+++|.+++||.+|++||++.+
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLGNKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcccCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 58999999999999999999999999999888877788999999932899999999999999999999999764
No 30
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.70 E-value=6.8e-17 Score=112.47 Aligned_cols=73 Identities=23% Similarity=0.196 Sum_probs=65.7
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEe--CCeeecchHHHHHHHHHhC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVH--GGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~--~g~~l~eS~aI~~yL~~~~ 77 (263)
++||+++.||+|++++++|+++||+|+.+.++.. +..+++.+.||. |+||+|++ +|.+++||.+|++||++++
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~-~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGK-VQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCC-CcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 7999999999999999999999999999988654 346789999998 99999997 4689999999999999864
No 31
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.70 E-value=8.1e-17 Score=110.28 Aligned_cols=69 Identities=30% Similarity=0.406 Sum_probs=64.8
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEe-CCeeecchHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH-GGKPVCESMIILEYI 73 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~-~g~~l~eS~aI~~yL 73 (263)
++||++..||+|+|++++|+++|++|+.+.++..++++++.+.||. |+||+|++ +|..++||.+|++|+
T Consensus 1 ~~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~~~~~~~~~np~-~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 1 PILYSFRRCPYAMRARMALLLAGITVELREVELKNKPAEMLAASPK-GTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred CEEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCCCCCHHHHHHCCC-CCCCEEEECCCcEEecHHHHHHhh
Confidence 4799999999999999999999999999999988778899999998 99999998 489999999999996
No 32
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.69 E-value=8.5e-17 Score=110.93 Aligned_cols=71 Identities=30% Similarity=0.332 Sum_probs=65.5
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEE 75 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~ 75 (263)
++||+++.||+|++++++|+++|++|+.+.++.. ++.+++.+.||. |++|+|+++|.+++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQ-HTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcC-CCCCEEEECCEEEEcHHHHHHHHhC
Confidence 5899999999999999999999999999988864 356899999999 9999999999999999999999974
No 33
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.68 E-value=1.8e-16 Score=109.95 Aligned_cols=71 Identities=42% Similarity=0.577 Sum_probs=66.3
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEE 75 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~ 75 (263)
++||+++.||+|++++++|+++|++|+.+.++.. ++.+++.+.||. |++|+|+++|..++||.+|++||++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~-~~vP~l~~~g~~l~es~aI~~yL~~ 75 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPF-GQIPALEDGDLKLFESRAITRYLAE 75 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHhh
Confidence 7999999999999999999999999999988865 456899999998 9999999999999999999999986
No 34
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.68 E-value=2.2e-16 Score=109.53 Aligned_cols=73 Identities=33% Similarity=0.452 Sum_probs=66.7
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~ 77 (263)
++||+++.||++++++++|+++|++|+.+.++.. ...+++.+.||. |++|+|+++|.+++||.+|++||++++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPF-GKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 4899999999999999999999999999998865 345789999998 999999999999999999999999864
No 35
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.68 E-value=6.9e-16 Score=119.70 Aligned_cols=183 Identities=20% Similarity=0.247 Sum_probs=126.4
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEe-CCeeecchHHHHHHHHHhCCCCCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH-GGKPVCESMIILEYIEEMWPQNPL 82 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~-~g~~l~eS~aI~~yL~~~~~~~~l 82 (263)
|+||-+.+||||.|+|+++.++|||++.....-++.......+.. .+||+|+. +|..+.||..|++|+++..+++-+
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe~Tp~rmiG~--KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~l 78 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDEETPIRMIGQ--KQVPILQKEDGRAMPESLDIVHYVDELDGKPLL 78 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccCcccChhhhhcc--cccceEEccccccchhhhHHHHHHHHhcCchhh
Confidence 589999999999999999999999999887765532222223333 69999994 889999999999999999876544
Q ss_pred CCC-CHHHHHHHHHHHHHHHhhhHHHHH-------------HHhcccC----------hhHHHHHHHHHHHHHHHHHHcc
Q 024749 83 MPN-NPYDRALARFWIKFAEDKLVVAIL-------------KLFRSIT----------GQELENAKKEILEILQTLEEHG 138 (263)
Q Consensus 83 ~p~-~~~~~a~~~~~~~~~~~~~~~~~~-------------~~~~~~~----------~~~~~~~~~~l~~~l~~L~e~~ 138 (263)
-++ .|+..+..+....+.+-.+.|.+. ++|.... -.......+++...++.| +..
T Consensus 79 t~~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l-~~L 157 (215)
T COG2999 79 TGKVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRAL-DKL 157 (215)
T ss_pred ccCcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHH-HHH
Confidence 432 343444444433344444444432 2332210 112255688888899999 998
Q ss_pred cCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhh
Q 024749 139 LRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIE 198 (263)
Q Consensus 139 L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~ 198 (263)
+.+..=+.| .++.-||.++|.|..+...+ |..+. .++..|+++|.+...+.
T Consensus 158 i~~~s~~n~-~l~~ddi~vFplLRnlt~v~---gi~wp-----s~v~dy~~~msektqV~ 208 (215)
T COG2999 158 IVGPSAVNG-ELSEDDILVFPLLRNLTLVA---GIQWP-----SRVADYRDNMSEKTQVN 208 (215)
T ss_pred hcCcchhcc-ccchhhhhhhHHhccceecc---cCCCc-----HHHHHHHHHHHHhhCcc
Confidence 876664555 49999999999998874332 43332 47999999998765543
No 36
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.68 E-value=1.1e-16 Score=110.32 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=66.0
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEE 75 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~ 75 (263)
++||+++.|++|++++++|+++|++|+.+.++..+..+++.+.||. |++|+|+++|.+++||.+|++||++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 2 YTLTYFPVRGRAEAIRLLLADQGISWEEERVTYEEWQESLKPKMLF-GQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred cEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHHHhhhhhhccCCC-CCCCEEEECCEEEEcHHHHHHHHhc
Confidence 7999999999999999999999999999999876556678899998 9999999999999999999999975
No 37
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.67 E-value=1.5e-15 Score=115.50 Aligned_cols=118 Identities=47% Similarity=0.811 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHH
Q 024749 88 YDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVI 167 (263)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~ 167 (263)
.+++++++|+++.++.+.+.+...+.. .++..+...+.+.+.++.| |+.|++++|++|+++|+|||.+++.+.++..+
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~ 79 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAA-KGEEREKAKEEALEALKVL-EEELGGKPFFGGDTIGYVDIALGSFLGWFRAY 79 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCCCcchHHHHHHHHHHHHHHH
Confidence 478999999999998888887766655 4556677888999999999 99999899999999999999999999887544
Q ss_pred hhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcchH
Q 024749 168 GDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDDI 207 (263)
Q Consensus 168 ~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~ 207 (263)
....+.+..+.+.+|++.+|+++|.++|+++++.+..+..
T Consensus 80 ~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~ 119 (126)
T cd03185 80 EEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRDKL 119 (126)
T ss_pred HHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCHHHH
Confidence 3332433223468999999999999999999999887663
No 38
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.66 E-value=4.3e-16 Score=109.42 Aligned_cols=73 Identities=34% Similarity=0.432 Sum_probs=66.7
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeC---CeeecchHHHHHHHHHhC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHG---GKPVCESMIILEYIEEMW 77 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~---g~~l~eS~aI~~yL~~~~ 77 (263)
++||+++. |+|++++++|+++|++|+.+.++.. ++.+++.+.||. |+||+|+++ |.+++||.+|++||++++
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPN-GRIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcC-CCCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 79999985 9999999999999999999988864 567899999998 999999986 889999999999999987
Q ss_pred C
Q 024749 78 P 78 (263)
Q Consensus 78 ~ 78 (263)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 5
No 39
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.66 E-value=3e-16 Score=107.75 Aligned_cols=70 Identities=37% Similarity=0.548 Sum_probs=64.8
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++||+++.||+|++++++|+++|++|+.+.++.. ++.+++.+.||. |++|+|+++|.+++||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPN-GEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999998764 467899999998 999999999999999999999984
No 40
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=1.4e-16 Score=130.53 Aligned_cols=200 Identities=21% Similarity=0.258 Sum_probs=148.4
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCc--eeEecCC--CCCchHH------------------------------HhcCC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPY--EFVAEDL--SNKSDLL------------------------------LKYNP 48 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~--~~~~v~~--~~~~~~~------------------------------~~~~P 48 (263)
.+.||....|||++|..+..+.+|++= -...+.. .++...| ...+|
T Consensus 37 ryhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p 116 (319)
T KOG2903|consen 37 RYHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASP 116 (319)
T ss_pred eEEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCC
Confidence 467999999999999999999999962 1222222 1111111 11112
Q ss_pred CC-C--cccEEEe---CCeeecchHHHHHHHH---HhC------CCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-Hh
Q 024749 49 VH-K--KIPVLVH---GGKPVCESMIILEYIE---EMW------PQNPLMPNNPYDRALARFWIKFAEDKLVVAILK-LF 112 (263)
Q Consensus 49 ~~-g--~vP~L~~---~g~~l~eS~aI~~yL~---~~~------~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~-~~ 112 (263)
-| | +||+|-| ...+..||..|++.+. ..+ +.-.|+|.+ .+++++++..|+.+.+...+++ .|
T Consensus 117 ~Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~--L~~~Ide~N~wvy~~INNGVYk~GF 194 (319)
T KOG2903|consen 117 NYTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSS--LRAQIDETNSWVYDKINNGVYKCGF 194 (319)
T ss_pred CCCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHH--HHHHHhhhhceecccccCceeeecc
Confidence 11 1 8999997 4577899999999999 333 223577777 7999999999998888777654 34
Q ss_pred cccChhHHHHHHHHHHHHHHHHHHcccCCCc--cccCCCCCHHHHHHHHHHHHHH-HHhhhccccccC-CCCChHHHHHH
Q 024749 113 RSITGQELENAKKEILEILQTLEEHGLRERN--FFNGDNIGLVDIAFGSMLYWMQ-VIGDVVGVKLFD-SHKFPSLHTWF 188 (263)
Q Consensus 113 ~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~--fl~G~~~T~ADi~l~~~l~~~~-~~~~~~~~~~~~-~~~~p~L~~w~ 188 (263)
.. .++..+....++.+.|+++ |..|+++. |++|+++|.|||.+++++.++. .+...+..+.-. +++||+|..|.
T Consensus 195 A~-~~e~Ye~~V~~lfe~LDr~-E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~l 272 (319)
T KOG2903|consen 195 AE-KQEAYEEEVNQLFEALDRC-EDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWL 272 (319)
T ss_pred cc-ccchHHHHHHHHHHHHHHH-HHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHH
Confidence 44 7888899999999999999 99998876 9999999999999999998884 333333333222 56999999999
Q ss_pred HHHhc-ChhhhhhCCCcch
Q 024749 189 ENFKQ-VPEIEENFPNRDD 206 (263)
Q Consensus 189 ~~~~~-~p~~~~~~~~~~~ 206 (263)
+++.+ .|+++.|..=.+.
T Consensus 273 k~iY~~~~~~~~Ttd~~hI 291 (319)
T KOG2903|consen 273 KNIYWNIPGFSSTTDFNHI 291 (319)
T ss_pred HHHHhhccchhhccchhHH
Confidence 99988 9999998765555
No 41
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.65 E-value=6e-16 Score=107.12 Aligned_cols=70 Identities=27% Similarity=0.291 Sum_probs=65.3
Q ss_pred EEeccCCChhHHHHHHHHHhcCCCceeEecCCC--CCchHHHhcCCCCCcccEEEe-CCeeecchHHHHHHHHH
Q 024749 5 KLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS--NKSDLLLKYNPVHKKIPVLVH-GGKPVCESMIILEYIEE 75 (263)
Q Consensus 5 ~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~--~~~~~~~~~~P~~g~vP~L~~-~g~~l~eS~aI~~yL~~ 75 (263)
+||+++.||++++++++|+++|++|+.+.++.. ++.+++++.||. |++|+|++ +|.+++||.+|++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~-~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPL-GKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCC-CCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 799999999999999999999999999999875 567899999999 99999997 58899999999999986
No 42
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.64 E-value=7.3e-16 Score=106.08 Aligned_cols=70 Identities=33% Similarity=0.502 Sum_probs=64.1
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++||+++.||++++++++|+++|++|+.+.++.. .+.+++.+.||. |++|+|+++|..++||.+|++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~-~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPN-GRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCC-CCCCEEEECCEEEECHHHHHHHhC
Confidence 5899999999999999999999999999988753 456889999999 999999999999999999999984
No 43
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.64 E-value=4.1e-16 Score=107.02 Aligned_cols=71 Identities=27% Similarity=0.201 Sum_probs=63.6
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCC-CchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSN-KSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEE 75 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~-~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~ 75 (263)
++||+++.|++|+++|++|+++|++|+.+.++... ..+++.+.||. |++|+|+++|.+++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p~-~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLPF-GQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCcC-CCCCEEEECCEEEEecHHHHHHhhC
Confidence 58999999999999999999999999999887652 23458899998 9999999999999999999999973
No 44
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.64 E-value=6.3e-16 Score=106.35 Aligned_cols=70 Identities=34% Similarity=0.449 Sum_probs=65.1
Q ss_pred eEEeccCCChhHHHHHHHHHh--cCCCceeEecCCCCCchHHHhcCCCCCcccEEEe-CCeeecchHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKL--KGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH-GGKPVCESMIILEYIE 74 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~--~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~-~g~~l~eS~aI~~yL~ 74 (263)
++||++..||+|++++++|++ +|++|+.+.++...+.+++.+.||. |++|+|++ +|..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPWSDDESLLAVNPL-GKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcccCChHHHHhCCC-CCCCEEEECCCCEEECHHHHHhhhC
Confidence 589999999999999999999 8999999999877778899999998 99999985 7899999999999985
No 45
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.63 E-value=1.6e-15 Score=105.02 Aligned_cols=73 Identities=33% Similarity=0.517 Sum_probs=66.2
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWP 78 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~ 78 (263)
++||+++. +++++++++|+++|++|+.+.++.. ++.+++.+.||. |++|+|+++|..++||.+|++||++++|
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPL-GKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCC-CCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 48999875 6899999999999999999998864 567899999998 9999999999999999999999998864
No 46
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.63 E-value=9.6e-16 Score=105.39 Aligned_cols=70 Identities=34% Similarity=0.444 Sum_probs=63.6
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEe-CCeeecchHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVH-GGKPVCESMIILEYIE 74 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~-~g~~l~eS~aI~~yL~ 74 (263)
|+||+++.||+|++++++|+++|++|+.+.++.. .+.+++.+.||. |++|+|++ +|..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPA-GTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCC-CCCCEEEeCCCCEEecHHHHHHHhC
Confidence 5899999999999999999999999999988764 356789999998 99999995 7789999999999985
No 47
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.63 E-value=1.2e-15 Score=104.35 Aligned_cols=70 Identities=24% Similarity=0.356 Sum_probs=61.3
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeC-CeeecchHHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHG-GKPVCESMIILEYIEE 75 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~-g~~l~eS~aI~~yL~~ 75 (263)
|+||++..||+|+|+|++|+++|++|+.+.++... .....+.+|. |++|+|+++ |..+.||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~-~~~~~~~~~~-~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD-EATPIRMIGA-KQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc-hHHHHHhcCC-CccCEEEeCCCeEeehHHHHHHHHhC
Confidence 58999999999999999999999999999887543 3345678998 999999975 8999999999999974
No 48
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.63 E-value=1.4e-15 Score=108.89 Aligned_cols=71 Identities=35% Similarity=0.568 Sum_probs=66.2
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeC-CeeecchHHHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHG-GKPVCESMIILEYIE 74 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~-g~~l~eS~aI~~yL~ 74 (263)
.++||+++.||+|++++++|+++|++|+.+.++.....+++.+.||. |++|+|+++ |..++||.+|++||+
T Consensus 18 ~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~~~~~~~~~np~-~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 18 IIRLYSMRFCPYAQRARLVLAAKNIPHEVININLKDKPDWFLEKNPQ-GKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred cEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCCCcHHHHhhCCC-CCcCEEEECCCCEEECHHHHHHhhC
Confidence 48999999999999999999999999999999887777889999998 999999986 899999999999985
No 49
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.62 E-value=1.4e-15 Score=104.37 Aligned_cols=70 Identities=34% Similarity=0.475 Sum_probs=64.8
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
|+||++..|+++++++++|+++|++|+.+.++.. ++.+++.+.||. |++|+|+++|.+++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQ-GLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999998874 456899999998 999999999999999999999985
No 50
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.62 E-value=2e-15 Score=104.92 Aligned_cols=73 Identities=33% Similarity=0.455 Sum_probs=65.3
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeC-CeeecchHHHHHHHHHhCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHG-GKPVCESMIILEYIEEMWP 78 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~-g~~l~eS~aI~~yL~~~~~ 78 (263)
|+||+++.+ .+++++++|+++|++|+.+.++.. ++.+++.+.||. |++|+|+++ |..++||.+|++||++.+|
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~-~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPK-GQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCC-CCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 589999866 689999999999999999988775 457899999998 999999986 8999999999999999875
No 51
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.62 E-value=9.6e-15 Score=107.91 Aligned_cols=105 Identities=21% Similarity=0.357 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHH
Q 024749 88 YDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVI 167 (263)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~ 167 (263)
.+|++++.|++++++.+.+.+...+.. .++..+...+.+.+.+..| |+.|++++|++|+++|+|||++++.+.+...
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~- 78 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEKG-RKKEAEKARKELRESLLAL-APVFAHKPYFMSEEFSLVDCALAPLLWRLPA- 78 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHH-HHHHcCCCcccCCCCcHHHHHHHHHHHHHHH-
Confidence 479999999999999888887766654 4566677888999999999 9999999999999999999999998755432
Q ss_pred hhhccccccCCCCChHHHHHHHHHhcChhhhhh
Q 024749 168 GDVVGVKLFDSHKFPSLHTWFENFKQVPEIEEN 200 (263)
Q Consensus 168 ~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~ 200 (263)
.|.++ ...+|++.+|++++.++|+++++
T Consensus 79 ---~~~~~--~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 79 ---LGIEL--PKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred ---cCCCC--cccchHHHHHHHHHHCCHHHHHh
Confidence 25443 24899999999999999999875
No 52
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.60 E-value=1e-14 Score=113.52 Aligned_cols=124 Identities=19% Similarity=0.229 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHH-
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVI- 167 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~- 167 (263)
.++++++|++|..+.+.+.+.......+++..+...+.+.+.|+.| |+.|++++|++|+++|+||+++++.+.++...
T Consensus 4 ~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L-E~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~ 82 (142)
T cd03190 4 LRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRL-EELLSDRRYLLGDRLTEADIRLFTTLIRFDAVY 82 (142)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHH-HHHHccCCeeeCCCccHHHHHHHHHHHHHHHHh
Confidence 6888999999999988887766543336777788899999999999 99999999999999999999999988776321
Q ss_pred hhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcchH-HHHHhh
Q 024749 168 GDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDDI-WFISNI 213 (263)
Q Consensus 168 ~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~-~~~~~~ 213 (263)
....+......+.+|+|.+|+++|.++|+++++....... .++...
T Consensus 83 ~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~ 129 (142)
T cd03190 83 VQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSH 129 (142)
T ss_pred hhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhc
Confidence 1111111111358999999999999999999999876664 444444
No 53
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.60 E-value=2.7e-15 Score=102.40 Aligned_cols=65 Identities=48% Similarity=0.719 Sum_probs=56.6
Q ss_pred CChhHHHHHHHHHhcCCCceeEecCC----CCCchHHHhcCCCCCcccEEEe-CCeeecchHHHHHHHHHh
Q 024749 11 LSPFVCRVIWALKLKGVPYEFVAEDL----SNKSDLLLKYNPVHKKIPVLVH-GGKPVCESMIILEYIEEM 76 (263)
Q Consensus 11 ~sp~~~~v~l~L~~~gi~~~~~~v~~----~~~~~~~~~~~P~~g~vP~L~~-~g~~l~eS~aI~~yL~~~ 76 (263)
.|||++|++++|+++|++++.+.+.. .++++++.+.||. |+||+|++ +|.++.||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~-~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPR-GKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT--SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcC-eEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 49999999999999999999888733 2556899999999 99999997 889999999999999874
No 54
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.59 E-value=1.9e-14 Score=107.95 Aligned_cols=111 Identities=18% Similarity=0.290 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHhcc--cChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHH
Q 024749 85 NNPYDRALARFWIKFAEDKLVVAILKLFRS--ITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLY 162 (263)
Q Consensus 85 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~ 162 (263)
.|+.+++++++|+.+.++.+.+.+...... ...+..+...+.+.+.++.| |+.|++++|++|+++|+||+.+++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-e~~L~~~~yl~Gd~~tlADi~l~~~l~ 80 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDL-EARLQQHSYLLGDKPSLADWAIFPFVR 80 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHH-HHHHccCCccCCCCccHHHHHHHHHHH
Confidence 368899999999999999998888653322 12235677889999999999 999999999999999999999998877
Q ss_pred HHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhh
Q 024749 163 WMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEEN 200 (263)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~ 200 (263)
++... .....+.+++|+|.+|++++.++|+++++
T Consensus 81 ~~~~~----~~~~~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 81 QFAHV----DPKWFDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHh----hhcccCcccCHHHHHHHHHHHcChHHHhh
Confidence 66432 11112247999999999999999999985
No 55
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.58 E-value=5.5e-15 Score=104.07 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=62.1
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCC----CchHHHh-c----CCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSN----KSDLLLK-Y----NPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~----~~~~~~~-~----~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++|||+..++.|++++++|+++|++|+.+.+++.. +.+++.+ . +|+ |+||+|+++|.+++||.||++||+
T Consensus 1 ~~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~-g~vP~L~~~g~~l~ES~AIl~YLa 79 (82)
T cd03075 1 PTLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDF-PNLPYYIDGDVKLTQSNAILRYIA 79 (82)
T ss_pred CEEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcC-CCCCEEEECCEEEeehHHHHHHHh
Confidence 47999999999999999999999999999998753 1234432 2 298 999999999999999999999998
Q ss_pred HhC
Q 024749 75 EMW 77 (263)
Q Consensus 75 ~~~ 77 (263)
+++
T Consensus 80 ~~~ 82 (82)
T cd03075 80 RKH 82 (82)
T ss_pred hcC
Confidence 764
No 56
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.58 E-value=7.4e-15 Score=102.66 Aligned_cols=72 Identities=21% Similarity=0.256 Sum_probs=62.3
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcC-----CCCCcccEEEeCCeeecchHHHHHHHHHhC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYN-----PVHKKIPVLVHGGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~-----P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~ 77 (263)
+++||+++.++.+++++++|++.|++|+.+.++.. +++.+.+ |. |+||+|+++|.+++||.||++||++++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~---~~~~~~~~~~~~~~-g~vP~L~~~g~~l~ES~AI~~YL~~~~ 76 (79)
T cd03077 1 KPVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA---EDLEKLKKDGSLMF-QQVPMVEIDGMKLVQTRAILNYIAGKY 76 (79)
T ss_pred CCEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH---HHHHhhccccCCCC-CCCCEEEECCEEEeeHHHHHHHHHHHc
Confidence 47899999999999999999999999999988652 3333333 57 899999999999999999999999987
Q ss_pred C
Q 024749 78 P 78 (263)
Q Consensus 78 ~ 78 (263)
+
T Consensus 77 ~ 77 (79)
T cd03077 77 N 77 (79)
T ss_pred C
Confidence 6
No 57
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.58 E-value=6.2e-15 Score=102.46 Aligned_cols=72 Identities=26% Similarity=0.527 Sum_probs=62.3
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeC----CeeecchHHHHHHHHHhC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHG----GKPVCESMIILEYIEEMW 77 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~----g~~l~eS~aI~~yL~~~~ 77 (263)
+++||+++.||+|++++++|.++|++|+.+.++.... ++ .+.+|. |+||+|+++ |.++.||.+|++||++..
T Consensus 1 ~i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~~-~~-~~~~~~-~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 1 KITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVSR-KE-IKWSSY-KKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchhH-HH-HHHhCC-CccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 4899999999999999999999999999998875432 23 367998 999999964 789999999999999864
No 58
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.58 E-value=9.9e-15 Score=100.97 Aligned_cols=67 Identities=31% Similarity=0.515 Sum_probs=60.6
Q ss_pred eEEeccC-------CChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHh
Q 024749 4 VKLHGRL-------LSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEM 76 (263)
Q Consensus 4 ~~Ly~~~-------~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~ 76 (263)
++||++. .||+|++++++|+++|++|+...++. .+.+|. |++|+|+++|.++.||.+|++||+++
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~-------~~~~p~-g~vPvl~~~g~~l~eS~~I~~yL~~~ 73 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL-------AKRSPK-GKLPFIELNGEKIADSELIIDHLEEK 73 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc-------ccCCCC-CCCCEEEECCEEEcCHHHHHHHHHHH
Confidence 6899888 68999999999999999999987764 268998 99999999999999999999999998
Q ss_pred CC
Q 024749 77 WP 78 (263)
Q Consensus 77 ~~ 78 (263)
|+
T Consensus 74 ~~ 75 (75)
T cd03080 74 YG 75 (75)
T ss_pred cC
Confidence 64
No 59
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.57 E-value=5.1e-14 Score=116.27 Aligned_cols=177 Identities=21% Similarity=0.268 Sum_probs=126.1
Q ss_pred eEEeccC-------CChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHh
Q 024749 4 VKLHGRL-------LSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEM 76 (263)
Q Consensus 4 ~~Ly~~~-------~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~ 76 (263)
+-||.++ .||||.++-.+|...+|||+.....+. ..+.. |++|.++.||..+.+|.-|...|.++
T Consensus 46 VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~~-------~rSr~-G~lPFIELNGe~iaDS~~I~~~L~~h 117 (281)
T KOG4244|consen 46 VYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEIVDCSLK-------RRSRN-GTLPFIELNGEHIADSDLIEDRLRKH 117 (281)
T ss_pred EEEEeccccCCCCCCChHHHHHHHHHHHhCCCceeccccce-------eeccC-CCcceEEeCCeeccccHHHHHHHHHH
Confidence 4566654 689999999999999999998876553 22344 89999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHH---------------------------------HHHhccc--------
Q 024749 77 WPQNPLMPNNPYDRALARFWIKFAEDKLVVAI---------------------------------LKLFRSI-------- 115 (263)
Q Consensus 77 ~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~-------- 115 (263)
++-+..+ ++.++++...+...++..+.-.+ ++.+.+.
T Consensus 118 f~~~~~L--~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~ 195 (281)
T KOG4244|consen 118 FKIPDDL--SAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGA 195 (281)
T ss_pred cCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 8744323 34466666666655554422211 1111110
Q ss_pred -ChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhh-ccccccCCCCChHHHHHHHHHhc
Q 024749 116 -TGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDV-VGVKLFDSHKFPSLHTWFENFKQ 193 (263)
Q Consensus 116 -~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~-~~~~~~~~~~~p~L~~w~~~~~~ 193 (263)
+.=..++..+.+++.|..+ +..|++.+||+|+++|-+|+.+++.|..+-. +-. .-.++. .+++|+|.+|++|+++
T Consensus 196 IG~f~~~Ei~ell~rDlr~i-~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~l-e~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 196 IGDFESAEIDELLHRDLRAI-SDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLL-EGDFPNLLEYCERIRK 272 (281)
T ss_pred ccCcCHHHHHHHHHHHHHHH-HHHhCCCccccCCCCCcceeeehhhhhheec-cCCCcHHHHH-hhhchHHHHHHHHHHH
Confidence 0012234566778889999 9999999999999999999999998876522 100 011122 5789999999999976
No 60
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.57 E-value=9.2e-15 Score=101.40 Aligned_cols=71 Identities=35% Similarity=0.381 Sum_probs=58.4
Q ss_pred EEeccCCChhHHHHHHHHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeC-CeeecchHHHHHHHHH
Q 024749 5 KLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHG-GKPVCESMIILEYIEE 75 (263)
Q Consensus 5 ~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~-g~~l~eS~aI~~yL~~ 75 (263)
+|+++...++++++|++|+++|++|+.+.++.. ++.+++.+.||..|++|+|+++ |.+++||.||++||++
T Consensus 2 ~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 2 TLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 444444455999999999999999999999875 3349999999952699999998 9999999999999985
No 61
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.57 E-value=2.1e-14 Score=106.96 Aligned_cols=105 Identities=21% Similarity=0.388 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhccc--------ChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRSI--------TGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSM 160 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~ 160 (263)
+++++++|+.+.++.+.+.+...+... .+...+...+.+.+.++.| |+.|++++|++|+++|+|||.+++.
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~t~aDi~~~~~ 80 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYL-DAQLAGGPYLLGDRFSVADAYLFVV 80 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHH-HHHhcCCCeeeCCCcchHHHHHHHH
Confidence 589999999999998888775443221 1333466778899999999 9999989999999999999999998
Q ss_pred HHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhC
Q 024749 161 LYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENF 201 (263)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~ 201 (263)
+.++... +. +.+++|++.+|+++|.++|++++++
T Consensus 81 ~~~~~~~----~~---~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 81 LRWAPGV----GL---DLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHhhc----CC---ChhhChHHHHHHHHHHhCHHhHhhC
Confidence 8776321 22 2458999999999999999999864
No 62
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.55 E-value=6.5e-14 Score=106.38 Aligned_cols=116 Identities=22% Similarity=0.415 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCC--CccccCCCCCHHHHHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRE--RNFFNGDNIGLVDIAFGSMLYWMQV 166 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~--~~fl~G~~~T~ADi~l~~~l~~~~~ 166 (263)
+|++.+.|.++++..+ +.+.+.+.. ++..+...+.+.+.++.+ |+.|++ ++|++|+++|+||+.+++.+.++..
T Consensus 2 ~ra~~r~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~l~~l-e~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~ 77 (124)
T cd03184 2 EKAQQKLLLERFSKVV-SAFYKLLGA--PSDREEKKAELRSALENL-EEELTKRGTPFFGGDSPGMVDYMIWPWFERLEA 77 (124)
T ss_pred hHHHHHHHHHHHhhhh-HHHHHHHhc--cccchhhHHHHHHHHHHH-HHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHH
Confidence 5899999999997444 444344433 556678888999999999 999975 8999999999999999998887754
Q ss_pred HhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcchHHH
Q 024749 167 IGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDDIWF 209 (263)
Q Consensus 167 ~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~~~ 209 (263)
.....| .....+.+|+|++|+++|.++|+++++..+.+....
T Consensus 78 ~~~~~~-~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~~~~ 119 (124)
T cd03184 78 LKLLLG-YEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTEIHAE 119 (124)
T ss_pred HHhhcc-ccCCcccChHHHHHHHHhccChHHHHHhCCHHHHHH
Confidence 432212 112257899999999999999999999998776543
No 63
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.53 E-value=2e-13 Score=113.29 Aligned_cols=183 Identities=19% Similarity=0.398 Sum_probs=119.7
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCC--C
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQ--N 80 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~--~ 80 (263)
+++||.+..||+|.+||..|.+.||+|++++|+.-.+.+ .+-+. |.+||+|..+|..++||..|+.-|+.-... .
T Consensus 90 ~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~r~e--Ik~Ss-ykKVPil~~~Geqm~dSsvIIs~laTyLq~~~q 166 (370)
T KOG3029|consen 90 DLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVLRQE--IKWSS-YKKVPILLIRGEQMVDSSVIISLLATYLQDKRQ 166 (370)
T ss_pred eEEEEeeccCchHHHHHHHHhhcCCceEEEEecchhhhh--ccccc-cccccEEEeccceechhHHHHHHHHHHhccCCC
Confidence 589999999999999999999999999999998753222 12233 489999998777799999999887432210 0
Q ss_pred ------CCCC------------------------C-----CHHHHHHHHHHHHHHHhhhHHHH----HH----------H
Q 024749 81 ------PLMP------------------------N-----NPYDRALARFWIKFAEDKLVVAI----LK----------L 111 (263)
Q Consensus 81 ------~l~p------------------------~-----~~~~~a~~~~~~~~~~~~~~~~~----~~----------~ 111 (263)
+.+| + +.+.+..-+.|..|.++.+...+ ++ +
T Consensus 167 ~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFew 246 (370)
T KOG3029|consen 167 DLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFEW 246 (370)
T ss_pred CHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHHH
Confidence 0122 0 11223344566677666543322 11 1
Q ss_pred hcc-----------------c--------------ChhHHHHHHHHHHHHHHHHHHccc-CCCccccCCCCCHHHHHHHH
Q 024749 112 FRS-----------------I--------------TGQELENAKKEILEILQTLEEHGL-RERNFFNGDNIGLVDIAFGS 159 (263)
Q Consensus 112 ~~~-----------------~--------------~~~~~~~~~~~l~~~l~~L~e~~L-~~~~fl~G~~~T~ADi~l~~ 159 (263)
|.. + ........++.+.++++.. -..| .+++|+.|++|++||+.+++
T Consensus 247 f~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~W-vaalgknr~flGG~kPnLaDLsvfG 325 (370)
T KOG3029|consen 247 FSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQW-VAALGKNRPFLGGKKPNLADLSVFG 325 (370)
T ss_pred HHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHH-HHHhCCCCCccCCCCCchhhhhhhh
Confidence 100 0 0111122355555566655 4445 57899999999999999999
Q ss_pred HHHHHHHHhhhccccccCCCCChHHHHHHHHHhcC
Q 024749 160 MLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQV 194 (263)
Q Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~ 194 (263)
+|..+.......+ .-+..++..|+-+|++.
T Consensus 326 vl~sm~gc~afkd-----~~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 326 VLRSMEGCQAFKD-----CLQNTSIGEWYYRMEAL 355 (370)
T ss_pred hhhHhhhhhHHHH-----HHhcchHHHHHHHHHHH
Confidence 9998865433321 22567899999999763
No 64
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.53 E-value=2.7e-14 Score=100.96 Aligned_cols=67 Identities=33% Similarity=0.544 Sum_probs=58.5
Q ss_pred CCChhHHHHHHHHHhcCCCceeEecCCCCC---chHHHhcCCCCCcccEEEeC-CeeecchHHHHHHHHHhCC
Q 024749 10 LLSPFVCRVIWALKLKGVPYEFVAEDLSNK---SDLLLKYNPVHKKIPVLVHG-GKPVCESMIILEYIEEMWP 78 (263)
Q Consensus 10 ~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~---~~~~~~~~P~~g~vP~L~~~-g~~l~eS~aI~~yL~~~~~ 78 (263)
..||+|++++++|+++|++|+.+.++.... .+++ +.||. |++|+|+++ |..++||.+|++||++++|
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~-~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGF-YTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCC-ceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 679999999999999999999998876532 2344 78998 999999998 8999999999999999874
No 65
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.52 E-value=4.9e-14 Score=96.96 Aligned_cols=66 Identities=33% Similarity=0.569 Sum_probs=59.8
Q ss_pred ccCCChhHHHHHHHHHhcCCCceeEecCCC--CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 8 GRLLSPFVCRVIWALKLKGVPYEFVAEDLS--NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 8 ~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~--~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
....||++++++++|+++|++|+.+.++.. ++.+++.+.||. |++|+|+++|.+++||.+|++||+
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPT-GKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCC-CcCCEEEECCEEEEcHHHHHHHhC
Confidence 456899999999999999999999988875 346899999999 999999999999999999999983
No 66
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.51 E-value=2.8e-13 Score=101.50 Aligned_cols=105 Identities=22% Similarity=0.383 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHHHHhhhHHHHHHHhcc------------cChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHH
Q 024749 86 NPYDRALARFWIKFAEDKLVVAILKLFRS------------ITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLV 153 (263)
Q Consensus 86 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~A 153 (263)
|+.+++++++|+.+.++.+.+.+...+.. .+++..++..+++.+.++.| |+.|++++|++|+++|+|
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l-e~~L~~~~~l~gd~~t~a 79 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYL-DTRLAGSPYVAGDRFTIA 79 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHH-HHHhcCCCcccCCCCCHH
Confidence 46789999999999988887766543311 13445677888999999999 999998899999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhh
Q 024749 154 DIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEI 197 (263)
Q Consensus 154 Di~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~ 197 (263)
||++++.+.++... +.++ ...+|+|.+|++++.++|++
T Consensus 80 Di~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 80 DITAFVGLDFAKVV----KLRV--PEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHhHHHHhc----CCCC--ccccHHHHHHHHHHHhccCC
Confidence 99999998876432 4443 46899999999999999974
No 67
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.50 E-value=8.7e-14 Score=93.80 Aligned_cols=70 Identities=44% Similarity=0.603 Sum_probs=62.9
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCch-HHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSD-LLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~-~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++||+++.||+|++++++|+++|++|+.+.++...... ++.+.+|. +++|+|+++|.++.||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPL-GKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 48999999999999999999999999999988764333 58889998 999999999999999999999984
No 68
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.49 E-value=3.6e-13 Score=102.93 Aligned_cols=103 Identities=20% Similarity=0.354 Sum_probs=83.4
Q ss_pred hhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCC----------------CccccCCCCCHHHHHHHHHHHHHH
Q 024749 102 DKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRE----------------RNFFNGDNIGLVDIAFGSMLYWMQ 165 (263)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~----------------~~fl~G~~~T~ADi~l~~~l~~~~ 165 (263)
..+++.+..++...+++..+...+.+.+.|+.| |.+|++ ++|++|+++|+||+.+++.+.++.
T Consensus 9 ~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~l-d~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~ 87 (134)
T cd03198 9 EDIFAKFSAYIKNSNPALNENLEKGLLKALKKL-DDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVK 87 (134)
T ss_pred HHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHH-HHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 445666666666557788888899999999999 999986 789999999999999999988774
Q ss_pred HHh-hhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcchH
Q 024749 166 VIG-DVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDDI 207 (263)
Q Consensus 166 ~~~-~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~ 207 (263)
... ...+..+ .+++|+|++|++++.++|+|+++++..+.+
T Consensus 88 ~~~~~~~g~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i 128 (134)
T cd03198 88 VVAKKYRNFEI--PADLTGLWRYLKNAYQREEFTNTCPADQEI 128 (134)
T ss_pred HHHHhhcCCCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHH
Confidence 321 2224443 468999999999999999999999888664
No 69
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.48 E-value=5.4e-13 Score=100.85 Aligned_cols=111 Identities=19% Similarity=0.280 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHH-hcccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKL-FRSITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVI 167 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~ 167 (263)
++++++++++.+.+.... +.++ +....+...+...+.+.+.++.| |+.|++++|++|+++|+||+.+++.+.++...
T Consensus 2 e~~~id~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~ 79 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMG-LARICYSPDFEKLKPDYLAKLPDKLKLF-SDFLGDRPWFAGDKITYVDFLLYEALDQHRIF 79 (121)
T ss_pred chHHHHHHHHHHHHHHHH-HHHhhcCcchHHHHHHHHHHHHHHHHHH-HHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh
Confidence 578888888877655433 3333 22212344456678888999999 99999889999999999999999988887532
Q ss_pred hhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcchH
Q 024749 168 GDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDDI 207 (263)
Q Consensus 168 ~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~ 207 (263)
+... .+.+|+|.+|++++.++|++++++.+++..
T Consensus 80 ----~~~~--~~~~P~l~~~~~rv~~~p~vk~~~~~~~~~ 113 (121)
T cd03209 80 ----EPDC--LDAFPNLKDFLERFEALPKISAYMKSDRFI 113 (121)
T ss_pred ----Cccc--cccChHHHHHHHHHHHCHHHHHHHhcccCc
Confidence 2222 458999999999999999999999887653
No 70
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.47 E-value=5.9e-13 Score=100.10 Aligned_cols=104 Identities=24% Similarity=0.361 Sum_probs=81.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHH-hc-cc------------ChhHHHHHHHHHHHHHHHHHHcccCCCccccCCC
Q 024749 84 PNNPYDRALARFWIKFAEDKLVVAILKL-FR-SI------------TGQELENAKKEILEILQTLEEHGLRERNFFNGDN 149 (263)
Q Consensus 84 p~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~-~~------------~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~ 149 (263)
|.++.+++++++|+.+.++.+.+.+... +. .. ++...+....++.+.++.| |+.|++++|++|++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~Gd~ 80 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFL-EDRLAKKGYFVGDK 80 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHH-HHHHccCCCCCCCC
Confidence 5688899999999999998888776432 11 11 1233345567899999999 99999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcCh
Q 024749 150 IGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVP 195 (263)
Q Consensus 150 ~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p 195 (263)
+|+|||++++.+.++... +. ..+.+|+|.+|+++++++|
T Consensus 81 ~t~ADi~l~~~~~~~~~~----~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 81 LTAADIMMSFPLEAALAR----GP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CCHHHHHHHHHHHHHHHc----Cc---ccccCchHHHHHHHHhcCC
Confidence 999999999888776322 22 2568999999999999986
No 71
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.46 E-value=5.4e-13 Score=99.97 Aligned_cols=107 Identities=18% Similarity=0.410 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHhhhHHHHHH-----Hhc-----ccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILK-----LFR-----SITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFG 158 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~ 158 (263)
+++++++|+.+.++.+.+.+.. .+. ..+++..++..+.+.+.++.| |+.|++++|++|+++|+|||.++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~l~ 80 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVY-EARLSKSKYLAGDSFTLADLSHL 80 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH-HHHcccCcccCCCCccHHHHHHH
Confidence 5788999999988777665432 121 113455566788999999999 99999999999999999999999
Q ss_pred HHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhC
Q 024749 159 SMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENF 201 (263)
Q Consensus 159 ~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~ 201 (263)
+.+.+..... .... .+.+|+|.+|++++.++|++++++
T Consensus 81 ~~~~~~~~~~---~~~~--~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 81 PYLQYLMATP---FAKL--FDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHcc---chhh--hhcCchHHHHHHHHHhCHHHHhhC
Confidence 9887764311 1111 458999999999999999998864
No 72
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.46 E-value=1.7e-13 Score=102.01 Aligned_cols=106 Identities=19% Similarity=0.381 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHH-----hc-ccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKL-----FR-SITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLY 162 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~ 162 (263)
+++++++|+.|.++.+.+.+... +. ..++...+...+.+.+.++.+ |+.|++++|++|+++|+|||.+++.+.
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~l~~~~~ 79 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVL-DKRLAGRDYLAGDEYSIADIAIFPWVR 79 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHH-HHHHccCCcccCCCCCeeeeeHHHHHH
Confidence 47889999999988877665332 11 113445667788899999999 999998999999999999999999888
Q ss_pred HHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhC
Q 024749 163 WMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENF 201 (263)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~ 201 (263)
+.... +... .+.+|++.+|++++.++|++++++
T Consensus 80 ~~~~~----~~~~--~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 80 RLEWI----GIDD--LDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHhc----cccc--hhhchHHHHHHHHHhhCHHHHHhc
Confidence 77432 3222 468999999999999999999875
No 73
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.46 E-value=4.1e-13 Score=101.51 Aligned_cols=113 Identities=24% Similarity=0.416 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcc------cChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRS------ITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLY 162 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~ 162 (263)
+++++++|+.++++.+.+.+...+.. .++...+...+.+.+.++.| |+.|++++|++|+++|+||+.+++.+.
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~siaDi~l~~~~~ 79 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVL-EERLLKRTYLVGERLTLADIFVAGALL 79 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHH-HHHHccCceeccCCccHHHHHHHHHHH
Confidence 36889999999998888877543321 13455677888899999999 999999999999999999999999888
Q ss_pred HHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 163 WMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
+.... ..+... ...+|++.+|++++.++|++++++.+.+-
T Consensus 80 ~~~~~--~~~~~~--~~~~p~l~~w~~~~~~~p~~~~~~~~~~~ 119 (123)
T cd03181 80 LGFTY--VFDKEW--RAKYPNVTRWFNTVVNQPIFKAVFGEVKL 119 (123)
T ss_pred HHHHH--HcCHHH--HHhChHHHHHHHHHHcCHHHHHHcCCCCc
Confidence 76322 112222 35799999999999999999999877653
No 74
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.46 E-value=3.3e-13 Score=101.87 Aligned_cols=109 Identities=20% Similarity=0.219 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHhhhHHHH----HHHhccc----ChhHHHHHHHHHHHHHHHHHHcccC--CCccccCCCCCHHHHHH
Q 024749 88 YDRALARFWIKFAEDKLVVAI----LKLFRSI----TGQELENAKKEILEILQTLEEHGLR--ERNFFNGDNIGLVDIAF 157 (263)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~l~~~l~~L~e~~L~--~~~fl~G~~~T~ADi~l 157 (263)
.+++++++|+.++.+.+.+.+ ...+... .+...+...+.+.+.++.| |+.|+ +++|++|+++|+|||++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~~l~G~~~t~ADi~~ 80 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAAL-EKLLAQTAGKFCFGDEPTLADICL 80 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCeecCCcCCHHHHHH
Confidence 478999999999987776542 1111110 1222233456788999999 99997 45899999999999999
Q ss_pred HHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCc
Q 024749 158 GSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNR 204 (263)
Q Consensus 158 ~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~ 204 (263)
++.+.+.... +.. .+.+|+|.+|++++.++|+++++++.+
T Consensus 81 ~~~~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~~~~~~~~ 120 (121)
T cd03191 81 VPQVYNARRF----GVD---LSPYPTIARINEACLELPAFQAAHPDN 120 (121)
T ss_pred HHHHHHHHHh----CCC---cccCcHHHHHHHHHHhChhHHHhCcCc
Confidence 9988765322 322 368999999999999999999988754
No 75
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.44 E-value=1.3e-12 Score=98.71 Aligned_cols=110 Identities=20% Similarity=0.458 Sum_probs=77.6
Q ss_pred CHHHHHHHHHHHHHHHhhhHHHH-HHHhcccChhHHHHHHHHHHHHHHHHHHcccC---CCccccCCCCCHHHHHHHHHH
Q 024749 86 NPYDRALARFWIKFAEDKLVVAI-LKLFRSITGQELENAKKEILEILQTLEEHGLR---ERNFFNGDNIGLVDIAFGSML 161 (263)
Q Consensus 86 ~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~---~~~fl~G~~~T~ADi~l~~~l 161 (263)
|+.+|+++++|+.+.. .+...+ ...+.. . ..+.+.+.++.| |+.|+ +++|+.| ++|+|||++++.+
T Consensus 1 d~~~ra~~~~~~~~~~-~~~~~~~~~~~~~--~-----~~~~~~~~l~~L-e~~L~~~~~~~fl~G-~~tlADi~l~~~~ 70 (120)
T cd03203 1 DPAKREFADELLAYTD-AFTKALYSSLIKG--D-----PSAEAAAALDYI-ENALSKFDDGPFFLG-QFSLVDIAYVPFI 70 (120)
T ss_pred CHHHHHHHHHHHHHHH-HHHHHHHHHHhcC--C-----chHHHHHHHHHH-HHHHHhcCCCCCcCC-CccHHHHHHHHHH
Confidence 4678999999999832 222222 223322 1 122345667777 77775 5899999 9999999999998
Q ss_pred HHHHH-HhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcchH
Q 024749 162 YWMQV-IGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDDI 207 (263)
Q Consensus 162 ~~~~~-~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~~ 207 (263)
.++.. .....+.++ .+++|+|.+|+++|.++|+++++.++.+..
T Consensus 71 ~~~~~~~~~~~~~~~--~~~~P~l~~W~~~~~~rp~~~~~~~~~~~~ 115 (120)
T cd03203 71 ERFQIFLSELFNYDI--TEGRPNLAAWIEEMNKIEAYTQTKQDPQEL 115 (120)
T ss_pred HHHHHHHHHhcCccc--cccCcHHHHHHHHHhcchHHHhHcCCHHHH
Confidence 87643 222235444 368999999999999999999999876553
No 76
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.44 E-value=5.5e-13 Score=100.27 Aligned_cols=106 Identities=20% Similarity=0.390 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcc---cChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRS---ITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQ 165 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~ 165 (263)
+++++++|+.+..+.+.+.+...+.. .++...+...+++.+.++.| |+.|++++|++|+++|+||+++++.+.++.
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~s~aDi~l~~~~~~~~ 80 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFL-ETFLEGSDYVAGDQLTIADLSLVATVSTLE 80 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH-HHHHccCCeeCCCCcCHHHHHHHHHHHHHH
Confidence 58899999999887777666443322 12345567788899999999 999998899999999999999999998874
Q ss_pred HHhhhccccccCCCCChHHHHHHHHHhcChhhhhhC
Q 024749 166 VIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENF 201 (263)
Q Consensus 166 ~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~ 201 (263)
.. .+.. ...+|+|.+|+++|+++|++++..
T Consensus 81 ~~---~~~~---~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 81 AL---LPLD---LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred Hh---cCCC---hhhCchHHHHHHHHHcccchHHHH
Confidence 31 1322 357999999999999999999854
No 77
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.43 E-value=1.5e-12 Score=99.11 Aligned_cols=110 Identities=19% Similarity=0.259 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCC---CccccCCCCCHHHHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRE---RNFFNGDNIGLVDIAFGSMLYWMQ 165 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~---~~fl~G~~~T~ADi~l~~~l~~~~ 165 (263)
++++++++.+.+++.. ..+.+++....+...+...+.+.+.++.| |+.|++ ++|++|+++|+||+.+++.+.++.
T Consensus 3 e~~~vd~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~ 80 (126)
T cd03210 3 EAALIDMVNDGVEDLR-LKYVRMIYQNYEAGKDDYIKDLPEQLKPF-EKLLSKNNGKGFIVGDKISFADYNLFDLLDIHL 80 (126)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHH
Confidence 6788888877765443 33333333213445566777788999999 999973 589999999999999999888774
Q ss_pred HHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 166 VIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 166 ~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
.. +... .+.+|+|.+|+++|.++|++++++.....
T Consensus 81 ~~----~~~~--~~~~P~l~~~~~rv~~~p~v~~~~~~~~~ 115 (126)
T cd03210 81 VL----APGC--LDAFPLLKAFVERLSARPKLKAYLESDAF 115 (126)
T ss_pred Hh----ChHh--hhcChHHHHHHHHHHhCcHHHHHHhCcCC
Confidence 32 2222 46899999999999999999999877655
No 78
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.42 E-value=1.6e-12 Score=96.11 Aligned_cols=101 Identities=21% Similarity=0.417 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhc----c----cChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFR----S----ITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSM 160 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~ 160 (263)
+|+++++|+.+.++.+.+.+...+. . .++...++..+.+.+.++.| |+.|++++|++|+++|+|||.+++.
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-E~~L~~~~~l~g~~~t~aDi~~~~~ 80 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAIL-DAQLAGRPYLAGDRFTLADIPLGCS 80 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHH-HHHhCCCCcccCCCCCHHHHHHHHH
Confidence 5888999999998888877654321 1 02234466788999999999 9999989999999999999999988
Q ss_pred HHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhh
Q 024749 161 LYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEI 197 (263)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~ 197 (263)
+...... + ...+++|+|.+|++++.++|+|
T Consensus 81 ~~~~~~~----~---~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 81 AYRWFEL----P---IERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHc----c---cccccCchHHHHHHHHHhCCCC
Confidence 7544221 2 1257899999999999999975
No 79
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.42 E-value=9.1e-13 Score=90.28 Aligned_cols=64 Identities=31% Similarity=0.465 Sum_probs=56.8
Q ss_pred EEeccC-------CChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHh
Q 024749 5 KLHGRL-------LSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEM 76 (263)
Q Consensus 5 ~Ly~~~-------~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~ 76 (263)
+||.++ .||+|++++++|+++|++|+.+.++... .+|. |++|+|+++|..+.||.+|++||+++
T Consensus 2 ~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~~-------~~p~-g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 2 ELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNPW-------RSPT-GKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCcc-------cCCC-cccCEEEECCEEEcCHHHHHHHHhhC
Confidence 567665 8999999999999999999999887532 7898 99999999999999999999999863
No 80
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.40 E-value=5.8e-13 Score=97.61 Aligned_cols=100 Identities=18% Similarity=0.296 Sum_probs=77.9
Q ss_pred HHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhcccc
Q 024749 95 FWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVK 174 (263)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~ 174 (263)
+|+.+.++.+.+.+...+....++..+....++.+.++.| |+.|++++|++|+++|+|||++++.+.+.... +
T Consensus 3 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~----~-- 75 (103)
T cd03207 3 RWLFFYAGVVEPALIAKAMGIEEPARMAGFGSYDDVLAAL-EQALAKGPYLLGERFTAADVLVGSPLGWGLQF----G-- 75 (103)
T ss_pred eeeeeccccccHHHHHHHcCCCcchhhhhhhhHHHHHHHH-HHHHccCCcccCCccCHHHHHHHHHHHHHHHc----C--
Confidence 3455555555555544443334455677788899999999 99999999999999999999999988887422 2
Q ss_pred ccCCCCChHHHHHHHHHhcChhhhhhCCC
Q 024749 175 LFDSHKFPSLHTWFENFKQVPEIEENFPN 203 (263)
Q Consensus 175 ~~~~~~~p~L~~w~~~~~~~p~~~~~~~~ 203 (263)
. .+.+|+|++|+++++++|++++++..
T Consensus 76 ~--~~~~p~l~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 76 L--LPERPAFDAYIARITDRPAFQRAAAI 102 (103)
T ss_pred C--CCCChHHHHHHHHHHcCHHHHHHhcc
Confidence 1 35899999999999999999998754
No 81
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.39 E-value=2.2e-12 Score=98.06 Aligned_cols=105 Identities=22% Similarity=0.403 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHhhhHHHHHH---------Hhc--ccChhHHHHHHHHHHHHHHHHHHcc-cCCCccccCCCCCHHHHHH
Q 024749 90 RALARFWIKFAEDKLVVAILK---------LFR--SITGQELENAKKEILEILQTLEEHG-LRERNFFNGDNIGLVDIAF 157 (263)
Q Consensus 90 ~a~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~l~~~l~~L~e~~-L~~~~fl~G~~~T~ADi~l 157 (263)
++++++|+.|..+.+.+.+.. .+. ..+++..+...+.+.+.++.+ |+. +++++|++|+++|+|||++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~l~~~~~~l~Gd~~t~ADi~l 80 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLL-ENYFLKDKPFLAGDEISIADLSA 80 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHHHhcCCCcccCCCCCHHHHHH
Confidence 567888888887666654422 111 113455567788899999999 886 5667999999999999999
Q ss_pred HHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhc--ChhhhhhC
Q 024749 158 GSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQ--VPEIEENF 201 (263)
Q Consensus 158 ~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~--~p~~~~~~ 201 (263)
++.+.+.... +.+. .+.+|+|.+|++++.+ +|+++++.
T Consensus 81 ~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 81 VCEIMQPEAA----GYDV--FEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHHHhc----CCcc--cccCchHHHHHHHHHHhcchhHHHHH
Confidence 9887665322 4333 3689999999999999 99999865
No 82
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.38 E-value=5.9e-12 Score=97.34 Aligned_cols=110 Identities=16% Similarity=0.297 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcccChhHH----HHHHHHHHHHHHHHHHcccC--CCccccCCCCCHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRSITGQEL----ENAKKEILEILQTLEEHGLR--ERNFFNGDNIGLVDIAFGSMLY 162 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~L~e~~L~--~~~fl~G~~~T~ADi~l~~~l~ 162 (263)
++++++++++.+.+.+...+...+.. +.+.. .-..+.+.+.++.| |+.|+ +++|++|+++|+||+.+++.+.
T Consensus 3 e~a~iD~i~~~v~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l-E~~L~~~~~~~l~G~~~T~ADi~l~~~l~ 80 (137)
T cd03208 3 ERALIDMYVEGTADLMEMILMLPFLP-PEEKEAKLALIKEKAKNRYFPVF-EKVLKSHGQDFLVGNKLSRADIHLLEAIL 80 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCC-hhhHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCeeeCCCCCHHHHHHHHHHH
Confidence 67888888888766655444333322 21111 22234557899999 99997 7889999999999999999888
Q ss_pred HHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 163 WMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
++... +... ...+|+|.+|++++.++|++++++.....
T Consensus 81 ~~~~~----~~~~--l~~~P~l~~~~~rv~~~P~vk~~~~~~~~ 118 (137)
T cd03208 81 MVEEL----DPSL--LSDFPLLQAFKTRISNLPTIKKFLQPGSP 118 (137)
T ss_pred HHHHh----chhh--hccChHHHHHHHHHHcCHHHHHHHhcCCC
Confidence 87432 2222 46899999999999999999999876554
No 83
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.36 E-value=8e-12 Score=94.48 Aligned_cols=100 Identities=19% Similarity=0.433 Sum_probs=75.1
Q ss_pred hhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCC-CccccCCCCCHHHHHHHHHHHHHHHH-hhhccccccCCC
Q 024749 102 DKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRE-RNFFNGDNIGLVDIAFGSMLYWMQVI-GDVVGVKLFDSH 179 (263)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~-~~fl~G~~~T~ADi~l~~~l~~~~~~-~~~~~~~~~~~~ 179 (263)
+.+++.+..++.. ++..++..+.+.+.++.| |+.|++ ++|++|+++|+||+++++.+.++... ....+..+ .+
T Consensus 12 ~~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~L-e~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~--~~ 86 (121)
T cd03201 12 SKIFSTFVGFLKS--KDSNDGTEQALLDELEAL-EDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV--PE 86 (121)
T ss_pred HHHHHHHHHHHHC--CcHHHHHHHHHHHHHHHH-HHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC--cc
Confidence 4445555555543 222366678899999999 999984 79999999999999999987776432 21123222 37
Q ss_pred CChHHHHHHHHHhcChhhhhhCCCcch
Q 024749 180 KFPSLHTWFENFKQVPEIEENFPNRDD 206 (263)
Q Consensus 180 ~~p~L~~w~~~~~~~p~~~~~~~~~~~ 206 (263)
.+|+|.+|+++|.++|+|+++++..+.
T Consensus 87 ~~P~l~~w~~rl~~rps~~~t~~~~~~ 113 (121)
T cd03201 87 SLTSVKSYMKALFSRESFVKTKAEKED 113 (121)
T ss_pred cchHHHHHHHHHHCCchhhhcCCCHHH
Confidence 999999999999999999999987665
No 84
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.35 E-value=5.3e-12 Score=91.49 Aligned_cols=96 Identities=19% Similarity=0.329 Sum_probs=74.9
Q ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCC
Q 024749 70 LEYIEEMWPQNPLMPNNPYDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGLRERNFFNGDN 149 (263)
Q Consensus 70 ~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~ 149 (263)
+|||.+.- .++|.++.+++.+++|++.....+.. ...+++.+.++.+ |++|++++|++|++
T Consensus 1 ~r~~~~~~---~~~~~~~~~~~~vd~~~d~~~~~l~~---------------~~~~~~~~~l~~l-e~~L~~~~fl~Gd~ 61 (96)
T cd03200 1 ARFLYRLL---GPAPNAPNAATNIDSWVDTAIFQLAE---------------GSSKEKAAVLRAL-NSALGRSPWLVGSE 61 (96)
T ss_pred CchHHHHh---cccCCCchHHHHHHHHHHHHHHHHhc---------------CCHHHHHHHHHHH-HHHHcCCCccCCCC
Confidence 47888873 39999999999999999976533320 1234556788889 99999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcC
Q 024749 150 IGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQV 194 (263)
Q Consensus 150 ~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~ 194 (263)
+|+|||.+++.+.+. +.. .+.+|+|.+|++++.++
T Consensus 62 ~tiADi~l~~~l~~~-------~~~---~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 62 FTVADIVSWCALLQT-------GLA---SAAPANVQRWLKSCENL 96 (96)
T ss_pred CCHHHHHHHHHHHHc-------ccc---cccChHHHHHHHHHHhC
Confidence 999999999877542 211 35899999999999763
No 85
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.29 E-value=1.1e-11 Score=89.29 Aligned_cols=74 Identities=30% Similarity=0.630 Sum_probs=62.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcCh
Q 024749 116 TGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVP 195 (263)
Q Consensus 116 ~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p 195 (263)
+++..+...+++.+.|+.+ |+.|++++|++|+++|+||+++++.+.++... +.... .+++|+|.+|++++.++|
T Consensus 22 ~~~~~~~~~~~~~~~l~~l-e~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 22 DEEMVEEARAKVPRYLEVL-EKRLKGGPYLVGDKLTIADIALFPMLDWLERL----GPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH----TTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHHcCCCeeeccCCchhHHHHHHHHHHHHHh----CCCcc-cccCHHHHHHHHHHHcCC
Confidence 3446677889999999999 99999999999999999999999999988654 33332 279999999999999987
No 86
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.27 E-value=1.1e-11 Score=90.40 Aligned_cols=95 Identities=19% Similarity=0.380 Sum_probs=68.6
Q ss_pred HHHHHHHHhhhHHHHHH----HhcccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhh
Q 024749 94 RFWIKFAEDKLVVAILK----LFRSITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGD 169 (263)
Q Consensus 94 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~ 169 (263)
++|+.+..+.+.+.... .... .+...+...+++.+.++.+ |+.|++++|++|+++|+||+.+++.+.+...
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~--- 76 (100)
T cd03206 2 QRWLSVAAGEIANGPAAARLITLFG-APLDKETAIARAHRLLRLL-EEHLAGRDWLAGDRPTIADVAVYPYVALAPE--- 76 (100)
T ss_pred ceehhhhhhhcccchhHHHHHHHhC-CHhHHHHHHHHHHHHHHHH-HHHHccCCccCCCCCCHHHHHHHHHHHHHhc---
Confidence 35666666655432211 1111 2234566788999999999 9999999999999999999999988765421
Q ss_pred hccccccCCCCChHHHHHHHHHhcChhh
Q 024749 170 VVGVKLFDSHKFPSLHTWFENFKQVPEI 197 (263)
Q Consensus 170 ~~~~~~~~~~~~p~L~~w~~~~~~~p~~ 197 (263)
.+ ...+++|+|.+|++++.++|++
T Consensus 77 -~~---~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 77 -GG---VDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred -cC---CChhhCcHHHHHHHHHHhCcCC
Confidence 12 2246899999999999999975
No 87
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.27 E-value=3.6e-11 Score=89.96 Aligned_cols=104 Identities=17% Similarity=0.149 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHH-H----hcc-cChhHHHHHHHHHHHHHHHHHHcccC-CCccccCCCCCHHHHHHHHH
Q 024749 88 YDRALARFWIKFAEDKLVVAILK-L----FRS-ITGQELENAKKEILEILQTLEEHGLR-ERNFFNGDNIGLVDIAFGSM 160 (263)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~~~-~----~~~-~~~~~~~~~~~~l~~~l~~L~e~~L~-~~~fl~G~~~T~ADi~l~~~ 160 (263)
.+++++++|+.++++.+.+.... . +.. ......+...+.+.+.++.+ |..|+ +++||+| ++|+||+++++.
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-e~~l~~~~~~l~G-~fSiAD~~l~~~ 79 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVA-EALLPPGAANLFG-EWCIADTDLALM 79 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHH-HHHHhcCCCcccC-CccHHHHHHHHH
Confidence 57999999999999998876321 1 111 01124466778888889999 88885 5589999 599999999999
Q ss_pred HHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhCC
Q 024749 161 LYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENFP 202 (263)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~~ 202 (263)
+.|.... |.++ . |++.+|.+++.++|+|++.+.
T Consensus 80 ~~~~~~~----g~~l----~-p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 80 LNRLVLN----GDPV----P-ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHc----CCCC----C-HHHHHHHHHHHCCHHHHHHHh
Confidence 9888543 5443 2 999999999999999998763
No 88
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.21 E-value=3.6e-11 Score=88.11 Aligned_cols=96 Identities=22% Similarity=0.344 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHh--------cccChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLF--------RSITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSM 160 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~ 160 (263)
+++++++|+.+.++.+.+.+.... ...+++..+...+++.+.++.| |+.|++++|+.|+++|+|||++++.
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~L~~~~~l~g~~~slaDi~~~~~ 80 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVL-EAHLAGRDFLVGDALTIADIALAAY 80 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHH-HHHHccCccccCCCCCHHHHHHHHH
Confidence 588999999998887776653321 1124556678899999999999 9999988999999999999999998
Q ss_pred HHHHHHHhhhccccccCCCCChHHHHHHHHHh
Q 024749 161 LYWMQVIGDVVGVKLFDSHKFPSLHTWFENFK 192 (263)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~ 192 (263)
+.++... +.+ ..++|+|.+|+++++
T Consensus 81 ~~~~~~~----~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 81 THVADEG----GFD---LADYPAIRAWLARIE 105 (105)
T ss_pred HHhcccc----CCC---hHhCccHHHHHHhhC
Confidence 8876321 322 457999999999874
No 89
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.20 E-value=3.6e-10 Score=90.13 Aligned_cols=171 Identities=17% Similarity=0.227 Sum_probs=124.7
Q ss_pred CChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhCCCCCCC-CCCHHH
Q 024749 11 LSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMWPQNPLM-PNNPYD 89 (263)
Q Consensus 11 ~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~~~~~l~-p~~~~~ 89 (263)
...-|..|...|.+.++||.++.-. +.+ -.+|- |+||.|..|...++|-.+|+.+++.+-- .|- ..+..+
T Consensus 33 d~ascLAVqtfLrMcnLPf~v~~~~----Nae--fmSP~-G~vPllr~g~~~~aef~pIV~fVeak~~--~l~s~lsE~q 103 (257)
T KOG3027|consen 33 DNASCLAVQTFLRMCNLPFNVRQRA----NAE--FMSPG-GKVPLLRIGKTLFAEFEPIVDFVEAKGV--TLTSWLSEDQ 103 (257)
T ss_pred cchhHHHHHHHHHHcCCCceeeecC----Ccc--ccCCC-CCCceeeecchhhhhhhHHHHHHHHhcc--chhhhhhhHH
Confidence 3446899999999999999987543 222 25786 9999999999999999999999998742 222 123347
Q ss_pred HHHHHHHHHHHHhhhHHHHH------------------------------H------------HhcccChhHHHHHHHHH
Q 024749 90 RALARFWIKFAEDKLVVAIL------------------------------K------------LFRSITGQELENAKKEI 127 (263)
Q Consensus 90 ~a~~~~~~~~~~~~~~~~~~------------------------------~------------~~~~~~~~~~~~~~~~l 127 (263)
++.++..++.+++.+..+-. + .++. +....++..+++
T Consensus 104 kadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W-~~~~~DqVie~v 182 (257)
T KOG3027|consen 104 KADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDW-DDKTMDQVIEQV 182 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCc-ccccHHHHHHHH
Confidence 88887777777655322210 0 0111 445667889999
Q ss_pred HHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHH--HhhhccccccCCCCChHHHHHHHHHhcC
Q 024749 128 LEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQV--IGDVVGVKLFDSHKFPSLHTWFENFKQV 194 (263)
Q Consensus 128 ~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~--~~~~~~~~~~~~~~~p~L~~w~~~~~~~ 194 (263)
...++.| ...|+..+|+.|++||-+|..+++.+..+.. ++..--.++ ..+|++|-+++.|++++
T Consensus 183 dkc~~aL-sa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~--lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 183 DKCCRAL-SAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANI--LKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHH-HHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHH--HHHhHHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999998776632 222211122 46899999999999764
No 90
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.20 E-value=4.1e-11 Score=81.21 Aligned_cols=68 Identities=29% Similarity=0.623 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHH
Q 024749 118 QELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFEN 190 (263)
Q Consensus 118 ~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~ 190 (263)
...++..+++.+.++.| |+.|++++|+.|+++|+||+.+++.+.++..... +..+ .+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~l-e~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDAL-EDHLADGPFLFGDRPSLADIALAPFLWRLRFVGP--DFDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTH--TCCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCc--CcCc--cccCHHHHHHHhC
Confidence 45678899999999999 9999999999999999999999999999866532 2223 4799999999986
No 91
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.15 E-value=1.6e-10 Score=85.66 Aligned_cols=77 Identities=26% Similarity=0.422 Sum_probs=62.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcccCCC----------ccccCCCCCHHHHHHHHHHHHHHHHhhhcccccc--CCCCChH
Q 024749 116 TGQELENAKKEILEILQTLEEHGLRER----------NFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLF--DSHKFPS 183 (263)
Q Consensus 116 ~~~~~~~~~~~l~~~l~~L~e~~L~~~----------~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~--~~~~~p~ 183 (263)
+.+..++..+.+.+.++.| |..|+++ +|++|+++|+|||++++.+.++... +.+.. ....+|+
T Consensus 23 ~~~~i~~~~~~l~~~l~~L-E~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~ 97 (111)
T cd03204 23 NVEYLKKILDELEMVLDQV-EQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPN 97 (111)
T ss_pred cHHHHHHHHHHHHHHHHHH-HHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChH
Confidence 5566688899999999999 9999754 5999999999999999999887532 32211 0358999
Q ss_pred HHHHHHHHhcChhh
Q 024749 184 LHTWFENFKQVPEI 197 (263)
Q Consensus 184 L~~w~~~~~~~p~~ 197 (263)
|.+|++++.++|+|
T Consensus 98 l~~w~~rv~aRpsf 111 (111)
T cd03204 98 LEAYFERVLQRESF 111 (111)
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999999975
No 92
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.12 E-value=2.4e-10 Score=78.20 Aligned_cols=58 Identities=22% Similarity=0.286 Sum_probs=49.1
Q ss_pred CChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHH
Q 024749 11 LSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEE 75 (263)
Q Consensus 11 ~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~ 75 (263)
.+++|.+++++|++.|+||+.+... . . ...+|. |+||+|++||.+++||.+|+.||++
T Consensus 16 ~~~~~~kv~~~L~elglpye~~~~~--~--~--~~~~P~-GkVP~L~~dg~vI~eS~aIl~yL~~ 73 (74)
T cd03079 16 DNASCLAVQTFLKMCNLPFNVRCRA--N--A--EFMSPS-GKVPFIRVGNQIVSEFGPIVQFVEA 73 (74)
T ss_pred CCCCHHHHHHHHHHcCCCcEEEecC--C--c--cccCCC-CcccEEEECCEEEeCHHHHHHHHhc
Confidence 5789999999999999999988432 1 1 126787 9999999999999999999999985
No 93
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.09 E-value=7.1e-10 Score=81.19 Aligned_cols=97 Identities=21% Similarity=0.248 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhccc----ChhHHHHHHHHHHHHHHHHHHcccCC--CccccCCCCCHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRSI----TGQELENAKKEILEILQTLEEHGLRE--RNFFNGDNIGLVDIAFGSMLY 162 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~L~e~~L~~--~~fl~G~~~T~ADi~l~~~l~ 162 (263)
++++++++++..++.........+... .++..+...+.+.+.++.| |+.|++ ++|++|+++|+||+++++.+.
T Consensus 2 e~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-e~~l~~~~~~~~~G~~~s~aDi~l~~~~~ 80 (104)
T cd03192 2 EAARVDALVDTIADLRAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKL-EKILKENGGGYLVGDKLTWADLVVFDVLD 80 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHH-HHHHHHcCCCeeeCCCccHHHHHHHHHHH
Confidence 578888888886544443333333221 2556677788899999999 999976 899999999999999999998
Q ss_pred HHHHHhhhccccccCCCCChHHHHHHHHH
Q 024749 163 WMQVIGDVVGVKLFDSHKFPSLHTWFENF 191 (263)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~L~~w~~~~ 191 (263)
++... +... ....+|++.+|++++
T Consensus 81 ~~~~~----~~~~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 81 YLLYL----DPKL-LLKKYPKLKALRERV 104 (104)
T ss_pred HHHhh----Cchh-hHHhChhHHHHHHhC
Confidence 87543 2221 145899999999875
No 94
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.09 E-value=1.2e-09 Score=81.71 Aligned_cols=71 Identities=18% Similarity=0.350 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHccc---CCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhh
Q 024749 121 ENAKKEILEILQTLEEHGL---RERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEI 197 (263)
Q Consensus 121 ~~~~~~l~~~l~~L~e~~L---~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~ 197 (263)
+...+.+.+.++.+ |..| ++++|++|+ +|+||+.+++.+.+.... +.+ ..|+|++|++++.++|++
T Consensus 40 ~~~~~~~~~~~~~l-e~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~----~~~-----~~P~l~~~~~rv~~rPsv 108 (114)
T cd03194 40 EAVQADIARIEAIW-AECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTY----GLP-----LSPAAQAYVDALLAHPAM 108 (114)
T ss_pred HHHHHHHHHHHHHH-HHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHc----CCC-----CCHHHHHHHHHHHCCHHH
Confidence 44444455555555 4444 577899999 999999999988877422 322 229999999999999999
Q ss_pred hhhCC
Q 024749 198 EENFP 202 (263)
Q Consensus 198 ~~~~~ 202 (263)
++.+.
T Consensus 109 ~~~~~ 113 (114)
T cd03194 109 QEWIA 113 (114)
T ss_pred HHHHh
Confidence 98764
No 95
>PRK10638 glutaredoxin 3; Provisional
Probab=99.04 E-value=1.2e-09 Score=76.84 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=65.1
Q ss_pred CceeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCC-CchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 1 MAEVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSN-KSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 1 Ms~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~-~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
|+++++|+.+.||+|++++.+|..+|++|+.+.++... ..+++.+.++. +++|++..+|..+.....+..+-.
T Consensus 1 m~~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~-~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 1 MANVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGR-TTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred CCcEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCC-CCcCEEEECCEEEeCHHHHHHHHH
Confidence 88999999999999999999999999999999987653 45778888997 899999999999999988887654
No 96
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.04 E-value=5.9e-10 Score=80.34 Aligned_cols=93 Identities=30% Similarity=0.617 Sum_probs=68.8
Q ss_pred HHHHHHHHhhhHHHHHHHhcc------cChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHH
Q 024749 94 RFWIKFAEDKLVVAILKLFRS------ITGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVI 167 (263)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~ 167 (263)
+.|+.+.++.+.+.+...+.. ..++..+...+.+.+.++.| |+.|++++|+.|+++|+||+.+++.+.++...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~ 80 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAAL-EKLLAGRPYLAGDRFSLADIALAPVLARLDLL 80 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHH-HHHHccCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 456666666555544332221 13566778889999999999 99999999999999999999999999988544
Q ss_pred hhhccccccCCCCChHHHHHHHHH
Q 024749 168 GDVVGVKLFDSHKFPSLHTWFENF 191 (263)
Q Consensus 168 ~~~~~~~~~~~~~~p~L~~w~~~~ 191 (263)
....+ . .+.+|++.+|++++
T Consensus 81 ~~~~~--~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 81 GPLLG--L--LDEYPRLAAWYDRL 100 (100)
T ss_pred hhhhh--h--hccCccHHHHHHhC
Confidence 22111 1 36899999999875
No 97
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.01 E-value=2.9e-10 Score=82.73 Aligned_cols=93 Identities=29% Similarity=0.498 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhc--ccChhHHHHHHHHHHHHHHHHHHcccCCCc--cccCCCCCHHHHHHHHHHH
Q 024749 87 PYDRALARFWIKFAEDKLVVAILKLFR--SITGQELENAKKEILEILQTLEEHGLRERN--FFNGDNIGLVDIAFGSMLY 162 (263)
Q Consensus 87 ~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~L~e~~L~~~~--fl~G~~~T~ADi~l~~~l~ 162 (263)
+.+++.++.|+++.. .+..... ...+...+...+.+.+.++.+ |+.|++++ |++|++||+||+++++.+.
T Consensus 3 ~~~~a~i~~W~~f~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~L~~~~~~~l~G~~~T~AD~~v~~~l~ 76 (99)
T PF14497_consen 3 PYWRALIDRWLDFSV-----AFRRRKARLEKDEASGDFSREELPKALKIL-EKHLAERGGDFLVGDKPTLADIAVFGFLA 76 (99)
T ss_dssp -TTHHHHHHHHH-GH-----CCHCCHCHHHHHCCHHHHHHHHHHHHHHHH-HHHHHHTSSSSSSSSS--HHHHHHHHHHH
T ss_pred hHHHHHHHHHHhccc-----hhhhHHHHHHHhhhhHHhhHHHHHHHHHHH-HHHHHcCCCeeecCCCCCHHHHHHHHHHH
Confidence 446778888888541 0000000 003445677788899999999 99998666 9999999999999999886
Q ss_pred HHHHHhhhccccccCCCCChHHHHHHHHHhc
Q 024749 163 WMQVIGDVVGVKLFDSHKFPSLHTWFENFKQ 193 (263)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~ 193 (263)
.+.. . +. ..++|+|.+|+++|++
T Consensus 77 ~~~~-----~-~~--~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 77 SLRW-----A-DF--PKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHC-----C-HH--TTTCHHHHHHHHHHHT
T ss_pred HHhh-----c-cc--ccccHHHHHHHHhhcC
Confidence 5531 2 12 2599999999999974
No 98
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.00 E-value=1.8e-09 Score=75.25 Aligned_cols=71 Identities=21% Similarity=0.270 Sum_probs=62.4
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
+++||+.++||+|.+++.+|+..|++|+.+.++-....+++.+.++. .++|++..+|..+.++.+|.+||+
T Consensus 9 ~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~~~~~~~~~~~g~-~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 9 SVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGNDARGRSLRAVTGA-TTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCChHHHHHHHHHCC-CCcCeEEECCEEEcCHHHHHHHhC
Confidence 58999999999999999999999999999988765444566666776 799999999999999999999984
No 99
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.98 E-value=1.4e-09 Score=77.26 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccc--cCCCCChHHHHHHHHHh
Q 024749 122 NAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKL--FDSHKFPSLHTWFENFK 192 (263)
Q Consensus 122 ~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~--~~~~~~p~L~~w~~~~~ 192 (263)
...+++.+.++.+ |+.|++++|++|+++|+||+.+++.+.++.... .+... ...+++|+|.+|++++.
T Consensus 19 ~~~~~~~~~l~~l-e~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~--~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKAL-SDLLGDKKFFFGDKPTSLDATVFGHLASILYAP--LPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHH-HHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcC--CCChHHHHHHHhCcHHHHHHHHhC
Confidence 5677889999999 999999999999999999999999888774310 01100 01357999999999874
No 100
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.92 E-value=3.5e-09 Score=80.37 Aligned_cols=69 Identities=19% Similarity=0.320 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcC
Q 024749 120 LENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQV 194 (263)
Q Consensus 120 ~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~ 194 (263)
.+...+.+.+.++.+ |+.|++++|+.|+++|+||+++++.+.+..... +..+ .+.+|+|.+|+++|.+.
T Consensus 56 ~~~~~~~~~~~l~~l-~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~---~~~~--~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPL-RATLKGQPFLGGAAPNYADYIVFGGFQWARIVS---PFPL--LEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHH-HHHHcCCCccCCCCCchhHHHHHHHHHHHHHcC---cccc--cccCChHHHHHHHHhcC
Confidence 457788899999999 999999999999999999999999888874321 3232 46899999999999763
No 101
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.85 E-value=1.7e-08 Score=68.89 Aligned_cols=71 Identities=21% Similarity=0.250 Sum_probs=60.4
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++++|+.++||+|.+++-+|...|++|+.+.++.......+...... .++|.+..+|..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~~~~~~~~~~g~-~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKDITGRSLRAVTGA-MTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCChhHHHHHHHhCC-CCcCeEEECCEEEeCHHHHHHHhC
Confidence 47999999999999999999999999999988755433445555565 699999999999999999999974
No 102
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.77 E-value=6.9e-08 Score=69.98 Aligned_cols=68 Identities=25% Similarity=0.422 Sum_probs=54.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHH
Q 024749 116 TGQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENF 191 (263)
Q Consensus 116 ~~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~ 191 (263)
+++..+.....+.+.++.+ |+.|++++| +++|+|||.+++.+.+..... .+... .+++|+|.+|+++|
T Consensus 31 ~~~~~~~~~~~~~~~l~~l-e~~L~~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 31 SQPWLERQRGKIERALDAL-EAELAKLPL---DPLDLADIAVACALGYLDFRH--PDLDW--RAAHPALAAWYARF 98 (98)
T ss_pred ChHHHHHHHHHHHHHHHHH-HHhhhhCCC---CCCCHHHHHHHHHHHHHHhHc--cCcch--hhhChHHHHHHHhC
Confidence 5566778899999999999 999998888 789999999999998874321 12222 46899999999985
No 103
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.74 E-value=6.2e-08 Score=66.37 Aligned_cols=59 Identities=25% Similarity=0.443 Sum_probs=50.2
Q ss_pred CCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHh
Q 024749 10 LLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEM 76 (263)
Q Consensus 10 ~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~ 76 (263)
..+|+|.++.+.|.+.|+||++....-. ...|. |++|+|+++|..+.+|..|++||.++
T Consensus 14 s~sp~clk~~~~Lr~~~~~~~v~~~~n~-------~~sp~-gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 14 SVDPECLAVLAYLKFAGAPLKVVPSNNP-------WRSPT-GKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEecCCC-------CCCCC-CccCEEEECCEEecChHHHHHHHHHc
Confidence 3679999999999999999987754321 34676 99999999999999999999999864
No 104
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.63 E-value=1.6e-07 Score=64.27 Aligned_cols=68 Identities=21% Similarity=0.179 Sum_probs=58.0
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeeecchHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILE 71 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~ 71 (263)
+++||+.+.||+|++++.+|+..|++|+.+.++.. ...+++.+.++. +++|++..+|..+..-.+..+
T Consensus 2 ~v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~-~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 2 RVTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGS-SVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred EEEEEecCCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCC-CCcCEEEECCEEEeCHHHHHh
Confidence 58999999999999999999999999999988754 335678888887 899999999988877666544
No 105
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.63 E-value=1.8e-07 Score=72.45 Aligned_cols=66 Identities=20% Similarity=0.302 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhc
Q 024749 123 AKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQ 193 (263)
Q Consensus 123 ~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~ 193 (263)
.++.+...++.+.+...++++|+.|++||+||+.+++.+..+..+. +.. +..++|++.+|+++|.+
T Consensus 80 ~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~---~~~--Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 80 VREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHP---AFK--DMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhc---ccc--chhhCcCHHHHHHHHHH
Confidence 3444455555442333456799999999999999999988774332 220 35689999999999976
No 106
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.60 E-value=3.6e-06 Score=71.79 Aligned_cols=171 Identities=20% Similarity=0.282 Sum_probs=117.8
Q ss_pred CChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEe-CCeeecchHHHHHHHHHhCCCCCCCCC-CHH
Q 024749 11 LSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH-GGKPVCESMIILEYIEEMWPQNPLMPN-NPY 88 (263)
Q Consensus 11 ~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~-~g~~l~eS~aI~~yL~~~~~~~~l~p~-~~~ 88 (263)
.++-|.++.+.+...+-|.++...+-.. ..|. |++|+|++ +|..++.-..|+.+|...-.+-.+-+. ...
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~~ssN~~-------~s~s-g~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~k 87 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVVVSSNPW-------RSPS-GKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSAK 87 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeEeecCCC-------CCCC-CCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHHH
Confidence 4677999999999999666554443221 3466 89999997 568999999999999874221112222 255
Q ss_pred HHHHHHHHHHHHHhhhHHHHHH---------------Hhcc-------------c--------------ChhHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILK---------------LFRS-------------I--------------TGQELENAKKE 126 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~---------------~~~~-------------~--------------~~~~~~~~~~~ 126 (263)
+++....|++++.+.+.+++.. .|.. . ..+..++....
T Consensus 88 q~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~ 167 (313)
T KOG3028|consen 88 QLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKD 167 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHH
Confidence 7888888888888777666521 1110 0 11234555666
Q ss_pred HHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHh--hh-ccccccCCCCChHHHHHHHHHhc
Q 024749 127 ILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIG--DV-VGVKLFDSHKFPSLHTWFENFKQ 193 (263)
Q Consensus 127 l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~--~~-~~~~~~~~~~~p~L~~w~~~~~~ 193 (263)
..++++.| ...|++++|++||+||--|+.++..+..+-..+ .. .... ....++|.++++++..
T Consensus 168 Aska~~~L-S~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~---l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 168 ASKALNLL-STLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVH---LLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHH-HHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHH---HHhcchHHHHHHHHHH
Confidence 77889999 999999999999999999999999888742111 00 0101 2248999999999876
No 107
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.54 E-value=3.9e-07 Score=61.73 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=55.6
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCC-CchHHHhcCCCCCcccEEEeCCeee--cchHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSN-KSDLLLKYNPVHKKIPVLVHGGKPV--CESMIILEYI 73 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~-~~~~~~~~~P~~g~vP~L~~~g~~l--~eS~aI~~yL 73 (263)
++||+.++||+|++++.+|...|++|..+.++... ..+++.+.++. +.+|+++.+|..+ .+..+|.+++
T Consensus 2 i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~-~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 2 VKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQ-RGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCC-CcccEEEECCEEEeeCCHHHHHHHh
Confidence 79999999999999999999999999988776442 23556777887 8999999888776 5666666654
No 108
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.53 E-value=4.3e-07 Score=61.09 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=59.5
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCC-CchHHHhcCCCCCcccEEEeCCeeecchHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSN-KSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEY 72 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~-~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~y 72 (263)
++++|+.++||+|++++.+|..++++|+...++... ..+++.+.++. .++|++..+|..+.++..|.+.
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~-~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGW-PTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCC-CCcCEEEECCEEEecHHHHHHh
Confidence 478999999999999999999999999988886553 35677778887 7999999999999999888764
No 109
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.52 E-value=3.3e-07 Score=62.00 Aligned_cols=62 Identities=26% Similarity=0.366 Sum_probs=52.4
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeeecc
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPVCE 65 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l~e 65 (263)
++++|+.++||+|++++.+|...|++|....++.. +..+++.+.+|. +++|+++++|..+.+
T Consensus 1 ~v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~-~~vP~i~~~~~~i~g 63 (73)
T cd02976 1 EVTVYTKPDCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGY-RSVPVVVIGDEHLSG 63 (73)
T ss_pred CEEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCC-cccCEEEECCEEEec
Confidence 47899999999999999999999999999888754 334677788897 899999998866644
No 110
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.51 E-value=2.9e-07 Score=70.04 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=56.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHH-h--hhccccccCCCCChHHHHHHHHHh
Q 024749 117 GQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVI-G--DVVGVKLFDSHKFPSLHTWFENFK 192 (263)
Q Consensus 117 ~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~-~--~~~~~~~~~~~~~p~L~~w~~~~~ 192 (263)
....++..+...+.++.| +..|++++|++|++||.+|+.+++.+..+... . ..++. . .+++|+|.+|++||.
T Consensus 52 r~~~ee~~~~~~~~l~aL-s~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~-~--~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 52 DKTLDQVIEEVDQCCQAL-SQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAE-K--VKKYSNLLAFCRRIE 126 (126)
T ss_pred CCCHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHH-H--HHhCcHHHHHHHhcC
Confidence 345577788889999999 99999999999999999999999988777421 0 01111 1 458999999999984
No 111
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.51 E-value=4.3e-07 Score=63.49 Aligned_cols=60 Identities=15% Similarity=0.234 Sum_probs=48.3
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeee
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPV 63 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l 63 (263)
+++||+.++||+|.+++-+|..+||+|+.+.++......+..+.++. .++|+++.++..+
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~~g~-~~vPvv~i~~~~~ 61 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEMINVDRVPEAAETLRAQGF-RQLPVVIAGDLSW 61 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCC-CCcCEEEECCEEE
Confidence 48999999999999999999999999999988754322223344676 7999999877554
No 112
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.49 E-value=1.7e-06 Score=63.21 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHHHHHhhhHHHHHH-----Hhcc-cChhHHHHHHHHHHHHHHHHHHcccC-CCccccCCCCCHHHHHHH
Q 024749 86 NPYDRALARFWIKFAEDKLVVAILK-----LFRS-ITGQELENAKKEILEILQTLEEHGLR-ERNFFNGDNIGLVDIAFG 158 (263)
Q Consensus 86 ~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~l~~~l~~L~e~~L~-~~~fl~G~~~T~ADi~l~ 158 (263)
|..+|++.+++..|+.+.+.+.=.. .|.. ....-.+...+.+.+.+... +..|. +++||+|+ .|+||..++
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a-~~ll~~g~~~LFGe-wsIAD~dlA 78 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVA-ERLLADGGPNLFGE-WSIADADLA 78 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHH-HHHTTT--SSTTSS---HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHH-HHHhccCCCCcccc-chHHHHHHH
Confidence 4568999999999999988775321 2222 12233455666667777777 77776 57999997 999999999
Q ss_pred HHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhhhC
Q 024749 159 SMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEENF 201 (263)
Q Consensus 159 ~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~~~ 201 (263)
+.+.++... |-.++ +++..|.++..++|++++.+
T Consensus 79 ~ml~Rl~~~----gd~vP-----~~l~~Ya~~qwqrpsVQ~Wl 112 (117)
T PF14834_consen 79 LMLNRLVTY----GDPVP-----ERLADYAERQWQRPSVQRWL 112 (117)
T ss_dssp HHHHHHHTT----T---------HHHHHHHHHHHT-HHHHHHH
T ss_pred HHHHHHHHc----CCCCC-----HHHHHHHHHHHCCHHHHHHH
Confidence 999998543 43332 68999999999999998754
No 113
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.47 E-value=3.9e-07 Score=70.32 Aligned_cols=74 Identities=18% Similarity=0.151 Sum_probs=56.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccc--cCCCCChHHHHHHHHHhc
Q 024749 117 GQELENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKL--FDSHKFPSLHTWFENFKQ 193 (263)
Q Consensus 117 ~~~~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~--~~~~~~p~L~~w~~~~~~ 193 (263)
....++..+...+.++.| ++.|++++|++|+++|.+|+.+++.+..+... .++... ...+++|+|.+|++||.+
T Consensus 59 ~~~~~~~~~~a~~~l~~l-~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~--~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 59 TEVEAEIYRDAKECLNLL-SQRLGESQFFFGDTPTSLDALVFGYLAPLLKA--PLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hhhHHHHHHHHHHHHHHH-HHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhc--cCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 345677788888999999 99999999999999999999999887766321 001000 014589999999999975
No 114
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.45 E-value=1e-06 Score=60.31 Aligned_cols=71 Identities=17% Similarity=0.218 Sum_probs=57.4
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCC-cccEEEeCCeeecchHHHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHK-KIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g-~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
+++||+.+.||+|.+++-+|+..|++|+.+.++.. ...+++.+.... . ++|++..+|..+.+...+.++-.
T Consensus 1 ~i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~-~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 1 KVEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGG-RRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCC-CCccCEEEECCEEEeChHHHHHHHh
Confidence 47899999999999999999999999999988754 222444444443 3 89999999999999998888654
No 115
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.31 E-value=3.2e-06 Score=58.62 Aligned_cols=71 Identities=18% Similarity=0.221 Sum_probs=59.1
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEE 75 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~ 75 (263)
+++|+.+.||+|.+++-+|+..|++|+.+.++.. ...+++.+.... ..+|++..+|..+.+..++.++.++
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~-~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGR-RTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCC-CCcCEEEECCEEEcChHHHHHHHHc
Confidence 4799999999999999999999999999988755 233556666565 6999999999999998888886653
No 116
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.27 E-value=5.4e-06 Score=57.75 Aligned_cols=68 Identities=24% Similarity=0.279 Sum_probs=53.9
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCC--CchHHHh-cCCCCCcccEEEeCCeeecchHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSN--KSDLLLK-YNPVHKKIPVLVHGGKPVCESMIILE 71 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~--~~~~~~~-~~P~~g~vP~L~~~g~~l~eS~aI~~ 71 (263)
++++|+.++||||.++.-+|..+|++|+.+.++... ...++.+ .++. .+||++..++..+.....+-+
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~-~tvP~I~i~~~~igg~~d~~~ 72 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQ-RTVPQIFIGGKHVGGCDDLDA 72 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCC-CCcCEEEECCEEEeCcccHHH
Confidence 389999999999999999999999999999887764 4444544 4476 799999998877654444443
No 117
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.25 E-value=2.8e-06 Score=57.85 Aligned_cols=57 Identities=18% Similarity=0.203 Sum_probs=45.4
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCe
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGK 61 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~ 61 (263)
+++|+.+.||+|++++-+|+..|++|+.+.++......+..+..+. ..||+++.+|.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~~g~-~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKAQGF-RQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCC-cccCEEEECCC
Confidence 5899999999999999999999999999988755333333344565 69999998553
No 118
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.22 E-value=4e-06 Score=57.43 Aligned_cols=70 Identities=14% Similarity=0.281 Sum_probs=52.8
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcC-CCCCcccEEEe-CCeeecchH--HHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYN-PVHKKIPVLVH-GGKPVCESM--IILEYI 73 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~-P~~g~vP~L~~-~g~~l~eS~--aI~~yL 73 (263)
+++||+..+||+|++++-.|...|++|+.+.++-. ...+++.+.+ +. ..+|+++. +|..+.+.. .|..+|
T Consensus 1 ~v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~-~~vP~i~~~~g~~l~~~~~~~~~~~l 75 (77)
T TIGR02200 1 TITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGN-MTVPTVKFADGSFLTNPSAAQVKAKL 75 (77)
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCC-ceeCEEEECCCeEecCCCHHHHHHHh
Confidence 47999999999999999999999999998877644 2235556666 76 79999974 666665433 344444
No 119
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.21 E-value=1.1e-05 Score=56.89 Aligned_cols=76 Identities=20% Similarity=0.226 Sum_probs=60.5
Q ss_pred ceeEEeccCCChhHHHHHHHHHh-----cCCCceeEecCCCC-CchHHHhcC--CCCCcccEEEeCCeeecchHHHHHHH
Q 024749 2 AEVKLHGRLLSPFVCRVIWALKL-----KGVPYEFVAEDLSN-KSDLLLKYN--PVHKKIPVLVHGGKPVCESMIILEYI 73 (263)
Q Consensus 2 s~~~Ly~~~~sp~~~~v~l~L~~-----~gi~~~~~~v~~~~-~~~~~~~~~--P~~g~vP~L~~~g~~l~eS~aI~~yL 73 (263)
.++++|+.++||+|.+++-+|.. .|++|+.+.++... ..+++.... +. ..+|.+..+|..+.+...|.+++
T Consensus 1 m~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~~-~~vP~ifi~g~~igg~~~~~~~~ 79 (85)
T PRK11200 1 MFVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKPV-ETVPQIFVDQKHIGGCTDFEAYV 79 (85)
T ss_pred CEEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCCC-CcCCEEEECCEEEcCHHHHHHHH
Confidence 04899999999999999999999 89999998887442 123443332 22 38999999999999999999999
Q ss_pred HHhCC
Q 024749 74 EEMWP 78 (263)
Q Consensus 74 ~~~~~ 78 (263)
.+.++
T Consensus 80 ~~~~~ 84 (85)
T PRK11200 80 KENLG 84 (85)
T ss_pred HHhcc
Confidence 88764
No 120
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.04 E-value=6.9e-06 Score=53.76 Aligned_cols=59 Identities=25% Similarity=0.343 Sum_probs=49.1
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeee
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPV 63 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l 63 (263)
+++|+.++||+|.+++-+|...|++|+...++.. ...+++.+.... .++|++..||..+
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~-~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGV-RTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSS-SSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCC-CccCEEEECCEEC
Confidence 5799999999999999999999999999999776 344566666555 6999999888754
No 121
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.03 E-value=4.2e-05 Score=53.06 Aligned_cols=72 Identities=21% Similarity=0.251 Sum_probs=60.0
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCc----hHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKS----DLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEE 75 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~----~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~ 75 (263)
++++|+.++||+|.+++-+|...+++|+...++..+.. ..+.+.+.. .++|.+..+|..+.++..|.++...
T Consensus 1 ~v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~-~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 1 PVVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQ-RTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 47899999999999999999999999999888776432 234455555 6999999999999999999998764
No 122
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=97.98 E-value=4.6e-05 Score=55.31 Aligned_cols=70 Identities=19% Similarity=0.108 Sum_probs=57.3
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCch----HHHhcCCCCCcccEEEeCCeeecchHHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSD----LLLKYNPVHKKIPVLVHGGKPVCESMIILEYI 73 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~----~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL 73 (263)
++++|+-++||||.+++-+|...|++|+.+.++...... .+.+.... .++|.+..+|..+.....+....
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~-~tvP~Vfi~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCS-PAVPAVFVGGKLVGGLENVMALH 82 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCC-CCcCeEEECCEEEcCHHHHHHHH
Confidence 589999999999999999999999999999887553222 34455565 69999999999998888877744
No 123
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=97.95 E-value=5.6e-05 Score=53.35 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=56.4
Q ss_pred eEEeccCCChhHHHHHHHHHhcC-----CCceeEecCCCC-CchHHHhcCCC-CCcccEEEeCCeeecchHHHHHHHHHh
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKG-----VPYEFVAEDLSN-KSDLLLKYNPV-HKKIPVLVHGGKPVCESMIILEYIEEM 76 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~g-----i~~~~~~v~~~~-~~~~~~~~~P~-~g~vP~L~~~g~~l~eS~aI~~yL~~~ 76 (263)
+++|+.++||+|.+++-+|...+ ++|+...++... ..+++...... ...||.+..+|..+.++..|.+++.+.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~~~ 81 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVKEN 81 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHHhc
Confidence 68999999999999999999985 567776665331 12334333221 038999999999999999999999876
Q ss_pred CC
Q 024749 77 WP 78 (263)
Q Consensus 77 ~~ 78 (263)
++
T Consensus 82 ~~ 83 (86)
T TIGR02183 82 FD 83 (86)
T ss_pred cc
Confidence 54
No 124
>PHA03050 glutaredoxin; Provisional
Probab=97.90 E-value=9.7e-05 Score=54.48 Aligned_cols=68 Identities=18% Similarity=0.243 Sum_probs=56.8
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCC---CceeEecCCCCC----chHHHhcCCCCCcccEEEeCCeeecchHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGV---PYEFVAEDLSNK----SDLLLKYNPVHKKIPVLVHGGKPVCESMIILE 71 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi---~~~~~~v~~~~~----~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~ 71 (263)
++++|+.++||||.+++-+|...|+ +|+...++-... .+++.+.+.. .+||.+..+|..+.....+..
T Consensus 14 ~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~-~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 14 KVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGG-RTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCC-CCcCEEEECCEEEeChHHHHH
Confidence 6899999999999999999999999 788888875322 3556676776 699999999999988877776
No 125
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.72 E-value=0.00029 Score=48.90 Aligned_cols=71 Identities=18% Similarity=0.229 Sum_probs=57.5
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCC--ceeEecCCCCCch----HHHhcCCCCCcccEEEeCCeeecchHHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVP--YEFVAEDLSNKSD----LLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEE 75 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~--~~~~~v~~~~~~~----~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~ 75 (263)
+++|+-++||+|.+++-+|...+++ |+...++.....+ .+.+.... ..+|.+..+|..+.++..+.++..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~-~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQ-RTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4789999999999999999999999 8888887653332 24455555 5899999999999999999887753
No 126
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.67 E-value=0.00025 Score=51.26 Aligned_cols=71 Identities=27% Similarity=0.293 Sum_probs=54.7
Q ss_pred eeEEecc-----CCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 3 EVKLHGR-----LLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 3 ~~~Ly~~-----~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++.+|.- +.||||.+++-+|...|++|+...+.-. ...+++.+.+.. .++|.+..+|..+.....+.+...
T Consensus 13 ~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~-~tvP~vfi~g~~iGG~ddl~~l~~ 89 (97)
T TIGR00365 13 PVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNW-PTIPQLYVKGEFVGGCDIIMEMYQ 89 (97)
T ss_pred CEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCC-CCCCEEEECCEEEeChHHHHHHHH
Confidence 4677743 7899999999999999999998877533 212344455665 699999999999888888777543
No 127
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.59 E-value=0.00034 Score=47.56 Aligned_cols=55 Identities=31% Similarity=0.524 Sum_probs=47.6
Q ss_pred CChhHHHHHHHHHhcCCC---ceeEecCCCCCchHHHhcCCCCCcccEEEe-CCeeecchHHHHHHH
Q 024749 11 LSPFVCRVIWALKLKGVP---YEFVAEDLSNKSDLLLKYNPVHKKIPVLVH-GGKPVCESMIILEYI 73 (263)
Q Consensus 11 ~sp~~~~v~l~L~~~gi~---~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~-~g~~l~eS~aI~~yL 73 (263)
.+|-|.++.+.|...+.+ ++++..+-. ...|. |++|+|.+ ++..+.+-.+|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~n~-------~~Spt-g~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSNNP-------WLSPT-GELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcCCC-------CcCCC-CCCCEEEECCCcEEECHHHHHHhh
Confidence 678999999999999999 777766422 26787 99999999 899999999999998
No 128
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.58 E-value=0.00041 Score=49.36 Aligned_cols=71 Identities=23% Similarity=0.170 Sum_probs=55.4
Q ss_pred eeEEecc-----CCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 3 EVKLHGR-----LLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 3 ~~~Ly~~-----~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++++|.- +.||||.+++-+|...|++|+.+.+... ...+++.+.... .++|.+..+|..+.+...+.+...
T Consensus 9 ~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~-~tvP~vfi~g~~iGG~~~l~~l~~ 85 (90)
T cd03028 9 PVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNW-PTFPQLYVNGELVGGCDIVKEMHE 85 (90)
T ss_pred CEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCC-CCCCEEEECCEEEeCHHHHHHHHH
Confidence 4667754 6899999999999999999999988644 222444555565 699999999999998888887543
No 129
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.40 E-value=0.00066 Score=61.91 Aligned_cols=70 Identities=14% Similarity=0.223 Sum_probs=55.5
Q ss_pred CceeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHH-hc--------CCCCCcccEEEeCCeeecchHHHHH
Q 024749 1 MAEVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLL-KY--------NPVHKKIPVLVHGGKPVCESMIILE 71 (263)
Q Consensus 1 Ms~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~-~~--------~P~~g~vP~L~~~g~~l~eS~aI~~ 71 (263)
|.++++|+-++||+|.++.-+|...||+|+.+.++-.....++. .. ... .+||.+..+|..+.+...+..
T Consensus 1 m~~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~~~~~~~~~~g~-~tvP~ifi~~~~igGf~~l~~ 79 (410)
T PRK12759 1 MVEVRIYTKTNCPFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEVNKNILLVEEHI-RTVPQIFVGDVHIGGYDNLMA 79 (410)
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHHhhccccccCCC-CccCeEEECCEEEeCchHHHH
Confidence 78899999999999999999999999999999887432222222 21 344 589999999988888877765
No 130
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.16 E-value=0.00054 Score=62.72 Aligned_cols=115 Identities=18% Similarity=0.302 Sum_probs=79.0
Q ss_pred CCeeecchHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHc
Q 024749 59 GGKPVCESMIILEYIEEMWP-QNPLMPNNPYDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEH 137 (263)
Q Consensus 59 ~g~~l~eS~aI~~yL~~~~~-~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~ 137 (263)
++..+..+..+..|..+... .+.+++.+ .++.+++.|.+++.+. ....+...+..| +.
T Consensus 44 d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~~-------------------~~~~~s~~~~~l-d~ 102 (712)
T KOG1147|consen 44 DGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSSTF-------------------SFDEISSSLSEL-DK 102 (712)
T ss_pred ccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhhc-------------------chHHHHHHHHHH-Hh
Confidence 56667777777777765443 34588877 7999999999988641 123456777888 88
Q ss_pred ccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhh
Q 024749 138 GLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIE 198 (263)
Q Consensus 138 ~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~ 198 (263)
.|.-+.||+|+++|+||+++|..+..-......+. ....+-++.||++-.+..++.+
T Consensus 103 ~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk----~~k~~~~v~Rw~~~~~~~~a~~ 159 (712)
T KOG1147|consen 103 FLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLK----AKKDYQNVERWYDLPEFQEAHN 159 (712)
T ss_pred hhhHHHHhhccchhHHHHHHHHHHhcccchHHHHH----hhCCchhhhhhcCcHhHHHHHH
Confidence 88888999999999999999998876321111111 0235678999998443333333
No 131
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=96.88 E-value=0.0056 Score=47.64 Aligned_cols=71 Identities=14% Similarity=0.019 Sum_probs=56.0
Q ss_pred eeEEeccC------CChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCC----CCCcccEEEeCCeeecchHHHHH
Q 024749 3 EVKLHGRL------LSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNP----VHKKIPVLVHGGKPVCESMIILE 71 (263)
Q Consensus 3 ~~~Ly~~~------~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P----~~g~vP~L~~~g~~l~eS~aI~~ 71 (263)
+++||..+ .+|+|.+++-+|+..+|+|+++.+++. ...+++.+... . .++|.+..+|..+.....+.+
T Consensus 1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~-~tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKA-VSLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCC-CCCCEEEECCEEEecHHHHHH
Confidence 36899888 899999999999999999999999865 22345544422 2 489999999999988888877
Q ss_pred HHH
Q 024749 72 YIE 74 (263)
Q Consensus 72 yL~ 74 (263)
.-+
T Consensus 80 L~e 82 (147)
T cd03031 80 LNE 82 (147)
T ss_pred HHH
Confidence 443
No 132
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.83 E-value=0.0023 Score=48.75 Aligned_cols=68 Identities=19% Similarity=0.319 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhh
Q 024749 120 LENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEI 197 (263)
Q Consensus 120 ~~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~ 197 (263)
.++..++++..|..| +..+.......| ++|+.||.+++.|+.+.... |.+ -=|++++|+++|.+...+
T Consensus 57 t~~~i~~l~~~L~~L-e~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivk---gi~-----~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEEL-EPLLASPNAVNG-ELSIDDIILFPILRSLTIVK---GIQ-----WPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHH-HHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCT---TS--------HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHH-HHHhccccccCC-CCCHHHHHHHHHHhhhhhcc---CCc-----CCHHHHHHHHHHHHHcCC
Confidence 367788899999999 999986666666 79999999999999874432 322 227899999999876544
No 133
>PRK10824 glutaredoxin-4; Provisional
Probab=96.56 E-value=0.014 Score=43.45 Aligned_cols=71 Identities=21% Similarity=0.216 Sum_probs=54.0
Q ss_pred eeEEecc-----CCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 3 EVKLHGR-----LLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 3 ~~~Ly~~-----~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++.+|.- +.||||.++.-+|...|++|+...++-. .....+...... .+||-+-.+|..+.....+.....
T Consensus 16 ~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~-~TVPQIFI~G~~IGG~ddl~~l~~ 92 (115)
T PRK10824 16 PILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANW-PTFPQLWVDGELVGGCDIVIEMYQ 92 (115)
T ss_pred CEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCC-CCCCeEEECCEEEcChHHHHHHHH
Confidence 3566644 5899999999999999999998877543 222444455565 699999999999998888877543
No 134
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=96.47 E-value=0.01 Score=39.19 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=40.2
Q ss_pred eeEEeccCCChhHHHHHHHHHhc-----CCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeec
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLK-----GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVC 64 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~-----gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~ 64 (263)
++++|+.++||+|.++.-+++.. ++++....+ .. .++..+.... ..+|++..+|..+.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~--~~-~~~l~~~~~i-~~vPti~i~~~~~~ 64 (67)
T cd02973 2 NIEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDA--AE-FPDLADEYGV-MSVPAIVINGKVEF 64 (67)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEc--cc-CHhHHHHcCC-cccCEEEECCEEEE
Confidence 47899999999999998888765 455555544 32 2334444444 47999998886654
No 135
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.37 E-value=0.011 Score=44.70 Aligned_cols=67 Identities=12% Similarity=0.253 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhh
Q 024749 121 ENAKKEILEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEI 197 (263)
Q Consensus 121 ~~~~~~l~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~ 197 (263)
.+..++++..|..+ +..+...... ++++|+.||.++|.|+.+.... |..+ =|++.+|+++|.+...+
T Consensus 59 ~~~i~~l~~~L~~l-~~ll~~~~~~-n~~ls~DDi~lFp~LR~Lt~vk---gi~~-----P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEEL-DPLILSSEAV-NGQLSTDDIILFPILRNLTLVK---GLVF-----PPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHH-HHHHcCcccc-CCcCCHHHHHHHHHHhhhhhhc---CCCC-----CHHHHHHHHHHHHHhCC
Confidence 46678888899999 8888544444 4579999999999999885543 3222 27899999999886544
No 136
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=96.29 E-value=0.028 Score=41.05 Aligned_cols=71 Identities=18% Similarity=0.213 Sum_probs=57.6
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHH----HhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLL----LKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~----~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
++..|+-..||||.+++-+|...++++.+.++|......++ .+..-. .+||.+-.+|..+.....+.++-.
T Consensus 15 ~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~-~tvP~vFI~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 15 PVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQ-RTVPNVFIGGKFIGGASDLMALHK 89 (104)
T ss_pred CEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCC-CCCCEEEECCEEEcCHHHHHHHHH
Confidence 57788889999999999999999999999999876433333 344445 599999999999998888887654
No 137
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=95.96 E-value=0.026 Score=38.01 Aligned_cols=63 Identities=30% Similarity=0.326 Sum_probs=47.0
Q ss_pred CceeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC-----------CCchHHHh--cCCCCCcccEEEe-CCeeec
Q 024749 1 MAEVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-----------NKSDLLLK--YNPVHKKIPVLVH-GGKPVC 64 (263)
Q Consensus 1 Ms~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-----------~~~~~~~~--~~P~~g~vP~L~~-~g~~l~ 64 (263)
||+++||+...||-|....--|+..++.|+.+.+.-. +..++|.. .|.. --+|+|.. +|.++.
T Consensus 1 mskp~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gy-iGIPall~~d~~vVl 77 (85)
T COG4545 1 MSKPKLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGY-IGIPALLTDDGKVVL 77 (85)
T ss_pred CCCceeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCc-ccceEEEeCCCcEEE
Confidence 8989999999999999999999999999999877533 33345542 2332 36899985 555443
No 138
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=95.87 E-value=0.018 Score=42.61 Aligned_cols=34 Identities=15% Similarity=-0.006 Sum_probs=31.0
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS 37 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~ 37 (263)
++||+.+.||+|++++-+|+.+|++|+.+.+.-.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~~ 34 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIVEE 34 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEecccCC
Confidence 5899999999999999999999999999987544
No 139
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=95.80 E-value=0.022 Score=43.46 Aligned_cols=33 Identities=12% Similarity=-0.061 Sum_probs=30.9
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDL 36 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~ 36 (263)
+++|+.+.||+|++++-+|..+||+|+.+.+.-
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~~ 34 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTERNIFS 34 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEeeccC
Confidence 799999999999999999999999999998753
No 140
>PTZ00062 glutaredoxin; Provisional
Probab=95.79 E-value=0.046 Score=44.96 Aligned_cols=70 Identities=23% Similarity=0.193 Sum_probs=52.9
Q ss_pred eeEEecc-----CCChhHHHHHHHHHhcCCCceeEecCCCC-CchHHHhcCCCCCcccEEEeCCeeecchHHHHHHH
Q 024749 3 EVKLHGR-----LLSPFVCRVIWALKLKGVPYEFVAEDLSN-KSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYI 73 (263)
Q Consensus 3 ~~~Ly~~-----~~sp~~~~v~l~L~~~gi~~~~~~v~~~~-~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL 73 (263)
++.||.- +.||||+++.-+|...|++|+...++... ..+.+.+.+.. .++|.+..+|..+.....+.+..
T Consensus 114 ~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~-~TvPqVfI~G~~IGG~d~l~~l~ 189 (204)
T PTZ00062 114 KILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNW-PTYPQLYVNGELIGGHDIIKELY 189 (204)
T ss_pred CEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCC-CCCCeEEECCEEEcChHHHHHHH
Confidence 4566633 58999999999999999999988776442 12344455555 68999999999988887777744
No 141
>PRK10026 arsenate reductase; Provisional
Probab=95.71 E-value=0.029 Score=43.33 Aligned_cols=36 Identities=6% Similarity=-0.034 Sum_probs=33.4
Q ss_pred CceeEEeccCCChhHHHHHHHHHhcCCCceeEecCC
Q 024749 1 MAEVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDL 36 (263)
Q Consensus 1 Ms~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~ 36 (263)
|+.+++|+.+.|.=|++++-+|+.+|++|+++.+--
T Consensus 1 m~~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~~~ 36 (141)
T PRK10026 1 MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLE 36 (141)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHCCCCcEEEeeeC
Confidence 888999999999999999999999999999987643
No 142
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=95.66 E-value=0.027 Score=41.05 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=30.5
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDL 36 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~ 36 (263)
+++|+.+.||+|++++-+|+.+|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYLK 33 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeecc
Confidence 479999999999999999999999999998853
No 143
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=95.65 E-value=0.03 Score=41.61 Aligned_cols=33 Identities=15% Similarity=-0.017 Sum_probs=30.7
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDL 36 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~ 36 (263)
+++|+.+.||.|++++-+|+.+|++|+.+.+.-
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~~ 34 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEERNLFK 34 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEEecCC
Confidence 789999999999999999999999999998743
No 144
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=95.29 E-value=0.052 Score=41.48 Aligned_cols=34 Identities=9% Similarity=-0.080 Sum_probs=31.4
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS 37 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~ 37 (263)
+++|+.+.|+.|++++-+|..+|++|+++.+.-.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~~~ 35 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQNLGKE 35 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEECCCC
Confidence 7899999999999999999999999999987543
No 145
>PRK12559 transcriptional regulator Spx; Provisional
Probab=95.21 E-value=0.049 Score=41.52 Aligned_cols=34 Identities=12% Similarity=-0.121 Sum_probs=31.3
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS 37 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~ 37 (263)
+++|+.+.|+.|+++.-+|..+|++|+.+.+.-.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~di~~~ 35 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEKNIVSN 35 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEEEeeCC
Confidence 7899999999999999999999999999987543
No 146
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=95.01 E-value=0.099 Score=36.17 Aligned_cols=55 Identities=20% Similarity=0.249 Sum_probs=39.9
Q ss_pred eeEEeccCCChhHHHHHHHHHhc--CCCceeEecCCCCCchHHHhcCCCCCcccEEEeCC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLK--GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGG 60 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~--gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g 60 (263)
+++||+-++|+.|..+.-.|+.. ..+++...++....++++ ...- -.+|+|..+|
T Consensus 1 ~l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~l~-~~Y~--~~IPVl~~~~ 57 (81)
T PF05768_consen 1 TLTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDIDEDPELF-EKYG--YRIPVLHIDG 57 (81)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTTTHHHH-HHSC--TSTSEEEETT
T ss_pred CEEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECCCCHHHH-HHhc--CCCCEEEEcC
Confidence 47999999999999999999965 445667777776544444 4433 2899999866
No 147
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=94.83 E-value=0.043 Score=40.89 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=30.3
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDL 36 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~ 36 (263)
+++|+.+.||+|++++-+|..+|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIGE 33 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecCC
Confidence 479999999999999999999999999988753
No 148
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=94.51 E-value=0.098 Score=38.81 Aligned_cols=34 Identities=12% Similarity=-0.090 Sum_probs=31.0
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDL 36 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~ 36 (263)
.++||+.+.|+-|++++-+|+.+|++|+++.+.-
T Consensus 1 ~i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~~ 34 (113)
T cd03033 1 DIIFYEKPGCANNARQKALLEAAGHEVEVRDLLT 34 (113)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCcEEeehhc
Confidence 3789999999999999999999999999987743
No 149
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=94.45 E-value=0.24 Score=33.75 Aligned_cols=54 Identities=17% Similarity=0.152 Sum_probs=39.4
Q ss_pred eEEeccCCChhHHHH----HHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeee
Q 024749 4 VKLHGRLLSPFVCRV----IWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPV 63 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v----~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l 63 (263)
+.+|. ++||.|..+ .-++++.|+++++..++ + .++..+.+- ..+|++..+|..+
T Consensus 3 i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~--~-~~~a~~~~v--~~vPti~i~G~~~ 60 (76)
T TIGR00412 3 IQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVT--D-MNEILEAGV--TATPGVAVDGELV 60 (76)
T ss_pred EEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeC--C-HHHHHHcCC--CcCCEEEECCEEE
Confidence 67777 899999988 66777788888888776 2 233334444 4899999887554
No 150
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=94.44 E-value=0.097 Score=38.26 Aligned_cols=33 Identities=24% Similarity=0.199 Sum_probs=30.4
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDL 36 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~ 36 (263)
+++|+.+.|+-|++++-+|..+|++|+++.+.-
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~~ 33 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYRK 33 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEeccc
Confidence 589999999999999999999999999998753
No 151
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=93.04 E-value=0.3 Score=36.48 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=30.0
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAED 35 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~ 35 (263)
+++|+.+.|.-|++++-+|+..||+|+++.+.
T Consensus 3 itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 3 ITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 89999999999999999999999999988664
No 152
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=92.98 E-value=0.26 Score=30.58 Aligned_cols=54 Identities=30% Similarity=0.248 Sum_probs=36.5
Q ss_pred eEEeccCCChhHHHHHHHHH-----hcCCCceeEecCCCCCchHHHhcCCCCCcccEEEe
Q 024749 4 VKLHGRLLSPFVCRVIWALK-----LKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH 58 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~-----~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~ 58 (263)
+.+|+..+||+|++.+-.+. ..++.+....++............+. +.+|+++.
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~~ 59 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKELKRYGV-GGVPTLVV 59 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhHHHhCCC-ccccEEEE
Confidence 35778889999999999998 45566665555443322222245665 79999985
No 153
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=92.96 E-value=1 Score=30.49 Aligned_cols=57 Identities=12% Similarity=0.148 Sum_probs=38.7
Q ss_pred eeEEeccCCChhHHHHHHHHHh----cCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCe
Q 024749 3 EVKLHGRLLSPFVCRVIWALKL----KGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGK 61 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~----~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~ 61 (263)
++++|+.++||+|..+.-.++. .+..+....++..+.. +..+.... ..+|++..+|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~-~~~~~~~v-~~vPt~~~~g~ 62 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENP-QKAMEYGI-MAVPAIVINGD 62 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCccCH-HHHHHcCC-ccCCEEEECCE
Confidence 4789999999999988777653 3444565666655433 33344444 57999998664
No 154
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=92.88 E-value=0.32 Score=36.80 Aligned_cols=33 Identities=18% Similarity=-0.043 Sum_probs=30.7
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAED 35 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~ 35 (263)
.+++|+.+.|.=|++++-+|+.+|++|+++.+.
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 589999999999999999999999999998764
No 155
>PRK10853 putative reductase; Provisional
Probab=92.51 E-value=0.35 Score=36.12 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=30.1
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAED 35 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~ 35 (263)
+++|+.+.|.=|++++-+|+.+|++|+++.+.
T Consensus 2 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 2 VTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred EEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 79999999999999999999999999998764
No 156
>PHA02125 thioredoxin-like protein
Probab=90.56 E-value=1 Score=30.35 Aligned_cols=51 Identities=24% Similarity=0.272 Sum_probs=36.7
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEe
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH 58 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~ 58 (263)
+.+|+.++||.|+.+.-.|+ +++++...++... ..+..+.... ..+|++..
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~--~~~~~~~~vd~~~-~~~l~~~~~v-~~~PT~~~ 52 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLA--NVEYTYVDVDTDE-GVELTAKHHI-RSLPTLVN 52 (75)
T ss_pred EEEEECCCCHhHHHHHHHHH--HHhheEEeeeCCC-CHHHHHHcCC-ceeCeEEC
Confidence 68899999999998877775 4566666666443 3455555555 68999984
No 157
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=90.52 E-value=0.92 Score=31.94 Aligned_cols=58 Identities=17% Similarity=0.118 Sum_probs=38.1
Q ss_pred eeEEeccCCChhHHHHHHHHHhc-----CCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeec
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLK-----GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVC 64 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~-----gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~ 64 (263)
++.+|..++||+|..+.-++... ++.+... +..+.++...+.+- ..+|+++.||..+.
T Consensus 15 ~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~v--d~~~~~e~a~~~~V--~~vPt~vidG~~~~ 77 (89)
T cd03026 15 NFETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMI--DGALFQDEVEERGI--MSVPAIFLNGELFG 77 (89)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEE--EhHhCHHHHHHcCC--ccCCEEEECCEEEE
Confidence 47889999999999877766654 4444444 44344444444444 47999998776543
No 158
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=90.08 E-value=0.76 Score=34.01 Aligned_cols=32 Identities=19% Similarity=0.016 Sum_probs=29.6
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAED 35 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~ 35 (263)
+++|+.+.|+=|++++-+|+.+|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999988764
No 159
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=89.49 E-value=0.93 Score=33.42 Aligned_cols=32 Identities=13% Similarity=0.002 Sum_probs=29.5
Q ss_pred eEEeccCCChhHHHHHHHHHhcCCCceeEecC
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGVPYEFVAED 35 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~ 35 (263)
+++|+.+.|.=|++++-+|+.+|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999988763
No 160
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=89.28 E-value=1.3 Score=35.30 Aligned_cols=38 Identities=29% Similarity=0.281 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHcccCCC---ccccCCC-CCHHHHHHHHHHHHH
Q 024749 126 EILEILQTLEEHGLRER---NFFNGDN-IGLVDIAFGSMLYWM 164 (263)
Q Consensus 126 ~l~~~l~~L~e~~L~~~---~fl~G~~-~T~ADi~l~~~l~~~ 164 (263)
.-.+.+..| ++.|++. +|++|++ +|-+|+.+++.+.-+
T Consensus 112 ~a~~~l~~L-~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 112 LAMECLSLL-EELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHH-HHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 355678888 8889877 9999988 999999999888765
No 161
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=88.91 E-value=2 Score=30.54 Aligned_cols=67 Identities=15% Similarity=0.089 Sum_probs=48.5
Q ss_pred eEEeccCCCh------hHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcC----CCCCcccEEEeCCeeecchHHHHH
Q 024749 4 VKLHGRLLSP------FVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYN----PVHKKIPVLVHGGKPVCESMIILE 71 (263)
Q Consensus 4 ~~Ly~~~~sp------~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~----P~~g~vP~L~~~g~~l~eS~aI~~ 71 (263)
+++|....++ .|++++.+|.-+||+|+++.++.. ...+|+.+.. +. ..+|-+-.++..+.+...+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~-~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGK-PLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCC-CCCCEEEECCEEeeCHHHHHH
Confidence 5677554442 477899999999999999999876 3235554442 33 589988888888888766665
No 162
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=87.44 E-value=4.3 Score=27.36 Aligned_cols=56 Identities=21% Similarity=0.259 Sum_probs=35.8
Q ss_pred eEEeccCCChhHHHHHH----HHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecc
Q 024749 4 VKLHGRLLSPFVCRVIW----ALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCE 65 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l----~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~e 65 (263)
+++ ..+.||+|..+.- ++...|++++...+ ...++. +.... ..+|+++.||.....
T Consensus 3 I~v-~~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~---~~~~~~-~~ygv-~~vPalvIng~~~~~ 62 (76)
T PF13192_consen 3 IKV-FSPGCPYCPELVQLLKEAAEELGIEVEIIDI---EDFEEI-EKYGV-MSVPALVINGKVVFV 62 (76)
T ss_dssp EEE-ECSSCTTHHHHHHHHHHHHHHTTEEEEEEET---TTHHHH-HHTT--SSSSEEEETTEEEEE
T ss_pred EEE-eCCCCCCcHHHHHHHHHHHHhcCCeEEEEEc---cCHHHH-HHcCC-CCCCEEEECCEEEEE
Confidence 667 4567999996655 44456777766655 334454 44443 589999988876443
No 163
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=87.40 E-value=3.2 Score=29.89 Aligned_cols=66 Identities=20% Similarity=0.185 Sum_probs=46.9
Q ss_pred ccCCChhHHHHHHHHHhcC-CCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 8 GRLLSPFVCRVIWALKLKG-VPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 8 ~~~~sp~~~~v~l~L~~~g-i~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
.++-|+|+.++--+|...| ++|....|-.+ +-.+...+.+-. .++|=|-.+|..+..+..|.+..+
T Consensus 26 ~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~s~W-PT~PQLyi~GEfvGG~DIv~Em~q 93 (105)
T COG0278 26 EFPQCGFSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEYSNW-PTFPQLYVNGEFVGGCDIVREMYQ 93 (105)
T ss_pred CCCCCCccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhhcCC-CCCceeeECCEEeccHHHHHHHHH
Confidence 4778999999999999999 66666655322 112333344444 589999899999999888887554
No 164
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=84.98 E-value=3.9 Score=30.04 Aligned_cols=68 Identities=18% Similarity=0.252 Sum_probs=46.5
Q ss_pred CChhHHHHHHHHHhc---CCCceeEecCCCCCchHHHh-cCCCCCcccEEEe-CC-------------eeecchHHHHHH
Q 024749 11 LSPFVCRVIWALKLK---GVPYEFVAEDLSNKSDLLLK-YNPVHKKIPVLVH-GG-------------KPVCESMIILEY 72 (263)
Q Consensus 11 ~sp~~~~v~l~L~~~---gi~~~~~~v~~~~~~~~~~~-~~P~~g~vP~L~~-~g-------------~~l~eS~aI~~y 72 (263)
.||.|..+-=+|... .-..++..|+......+..+ +...+..+|+|+. +| ..|+++..|++|
T Consensus 23 ~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~~ 102 (112)
T PF11287_consen 23 YCPHCAAIEGLLASFPDLRERLDVRRVDFPRPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILRY 102 (112)
T ss_pred ECCchHHHHhHHhhChhhhhcccEEEeCCCCchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHHH
Confidence 577777666555543 23466777777755555443 3443468999994 33 379999999999
Q ss_pred HHHhCC
Q 024749 73 IEEMWP 78 (263)
Q Consensus 73 L~~~~~ 78 (263)
|.+.|+
T Consensus 103 La~r~g 108 (112)
T PF11287_consen 103 LAERHG 108 (112)
T ss_pred HHHHcC
Confidence 999986
No 165
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=80.50 E-value=6.8 Score=28.25 Aligned_cols=71 Identities=18% Similarity=0.146 Sum_probs=41.5
Q ss_pred CceeEEeccCCCh------hHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcC---------CCCCcccEEEeCCeeec
Q 024749 1 MAEVKLHGRLLSP------FVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYN---------PVHKKIPVLVHGGKPVC 64 (263)
Q Consensus 1 Ms~~~Ly~~~~sp------~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~---------P~~g~vP~L~~~g~~l~ 64 (263)
|. +++|....++ ..+++..+|+.++|+|+.+.+... ....++.+.. +. .-.|-+..++..+.
T Consensus 1 m~-I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~~~~~~~-~lpPqiF~~~~Y~G 78 (99)
T PF04908_consen 1 MV-IKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEKDPGNGK-PLPPQIFNGDEYCG 78 (99)
T ss_dssp -S-EEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCCS-TSTT---S-EEEETTEEEE
T ss_pred CE-EEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhccccccCCCCCC-CCCCEEEeCCEEEe
Confidence 65 7888665443 356999999999999999988775 2234555433 22 23467777777776
Q ss_pred chHHHHHHH
Q 024749 65 ESMIILEYI 73 (263)
Q Consensus 65 eS~aI~~yL 73 (263)
+-..+-+.-
T Consensus 79 dye~f~ea~ 87 (99)
T PF04908_consen 79 DYEDFEEAN 87 (99)
T ss_dssp EHHHHHHHH
T ss_pred eHHHHHHHH
Confidence 666555543
No 166
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=71.39 E-value=5.2 Score=29.15 Aligned_cols=29 Identities=21% Similarity=0.293 Sum_probs=22.9
Q ss_pred eccCCChhHHHHHHHHHhcCCCceeEecC
Q 024749 7 HGRLLSPFVCRVIWALKLKGVPYEFVAED 35 (263)
Q Consensus 7 y~~~~sp~~~~v~l~L~~~gi~~~~~~v~ 35 (263)
|+.+.|.-|++++-+|+.+|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78889999999999999999999998774
No 167
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=64.00 E-value=5.3 Score=29.84 Aligned_cols=27 Identities=22% Similarity=0.380 Sum_probs=13.4
Q ss_pred cccEEEe--CCeeecchHHHHHHHHHhCC
Q 024749 52 KIPVLVH--GGKPVCESMIILEYIEEMWP 78 (263)
Q Consensus 52 ~vP~L~~--~g~~l~eS~aI~~yL~~~~~ 78 (263)
.-|-|.+ +|+.++|+.||++|+..-|.
T Consensus 35 ~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 35 SGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp -S--EEE-S--S----HHHHHHHHTT--T
T ss_pred ccceeeecCCceEEecccHHHHHHHhhcC
Confidence 4588864 78999999999999987664
No 168
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=61.74 E-value=50 Score=22.71 Aligned_cols=69 Identities=25% Similarity=0.284 Sum_probs=43.1
Q ss_pred eEEeccCCChhHHHHHHHHH-----hcCCCceeEecCCCCCchHHHhcCCCCCcccEEEe--CCeee------cchHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALK-----LKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH--GGKPV------CESMIIL 70 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~-----~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~--~g~~l------~eS~aI~ 70 (263)
+..++.++|+.|+...=.+. +.+ ++....++... ...+.+..-. ..+|++.. +|... .+...|.
T Consensus 21 vv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-~~~l~~~~~v-~~~Pt~~~~~~g~~~~~~~g~~~~~~l~ 97 (103)
T PF00085_consen 21 VVYFYAPWCPPCKAFKPILEKLAKEYKD-NVKFAKVDCDE-NKELCKKYGV-KSVPTIIFFKNGKEVKRYNGPRNAESLI 97 (103)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-SHHHHHHTTC-SSSSEEEEEETTEEEEEEESSSSHHHHH
T ss_pred EEEEeCCCCCccccccceeccccccccc-ccccchhhhhc-cchhhhccCC-CCCCEEEEEECCcEEEEEECCCCHHHHH
Confidence 45678889999997774443 233 55666666543 3445555455 68999983 55332 3566777
Q ss_pred HHHHH
Q 024749 71 EYIEE 75 (263)
Q Consensus 71 ~yL~~ 75 (263)
++|++
T Consensus 98 ~~i~~ 102 (103)
T PF00085_consen 98 EFIEK 102 (103)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 77764
No 169
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=60.02 E-value=47 Score=24.64 Aligned_cols=32 Identities=16% Similarity=0.300 Sum_probs=20.5
Q ss_pred eEEeccCCChhHHHHHHHH----HhcCCCceeEecC
Q 024749 4 VKLHGRLLSPFVCRVIWAL----KLKGVPYEFVAED 35 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L----~~~gi~~~~~~v~ 35 (263)
+.-++.++||+|+.+.=.| +..++++-...++
T Consensus 27 iv~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd 62 (122)
T TIGR01295 27 TFFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSE 62 (122)
T ss_pred EEEEECCCChhHHHHhHHHHHHHHhcCCcEEEEECC
Confidence 3456889999999754444 3345665555554
No 170
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=56.87 E-value=6.7 Score=32.66 Aligned_cols=60 Identities=15% Similarity=0.292 Sum_probs=46.1
Q ss_pred HHHHHHHHHcccCCCccccCCCCCHHHHHHHHHHHHHHHHhhhccccccCCCCChHHHHHHHHHhcChhhhh
Q 024749 128 LEILQTLEEHGLRERNFFNGDNIGLVDIAFGSMLYWMQVIGDVVGVKLFDSHKFPSLHTWFENFKQVPEIEE 199 (263)
Q Consensus 128 ~~~l~~L~e~~L~~~~fl~G~~~T~ADi~l~~~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p~~~~ 199 (263)
.+.++.+ +..|.+.+|.-|.+++-+|+.++..+.- + .....+++..+|+.++.+.-...+
T Consensus 10 ~~glk~l-~~sLA~ks~~~g~~~s~edv~vf~al~~----------e-p~s~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKL-NKSLAEKSYIEGYQLSKEDVVVFAALGV----------E-PQSARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhh-hHhhhcccCCCCCCcccccceeehhccc----------C-cchhhhhHHHHHHHHHHHHHHHHh
Confidence 5678899 9999999999999999999998754421 1 113577888999988887665553
No 171
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=55.39 E-value=31 Score=32.86 Aligned_cols=57 Identities=21% Similarity=0.285 Sum_probs=36.1
Q ss_pred eeEEeccCCChhHHHHHH----HHHhc-CCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeee
Q 024749 3 EVKLHGRLLSPFVCRVIW----ALKLK-GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPV 63 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l----~L~~~-gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l 63 (263)
.+++|..+.||+|-.+.- ++.+. +|..+.+.+. ..++...+.+- ..||.++.||.++
T Consensus 479 ~i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~--~~~~~~~~~~v--~~vP~~~i~~~~~ 540 (555)
T TIGR03143 479 NIKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVS--HFPDLKDEYGI--MSVPAIVVDDQQV 540 (555)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECc--ccHHHHHhCCc--eecCEEEECCEEE
Confidence 367888889999876554 33444 5766666553 33333334444 4899999877554
No 172
>PF15468 DUF4636: Domain of unknown function (DUF4636)
Probab=53.64 E-value=13 Score=30.61 Aligned_cols=25 Identities=20% Similarity=0.341 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHHHHHHhhhHhhhhh
Q 024749 233 SHFVLVLFMYWCLKMFFSLCFCYCL 257 (263)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (263)
|-++.|.|+.||.-..+-|||+||.
T Consensus 34 sc~~iG~fLlWyfviilvLm~~~ra 58 (243)
T PF15468_consen 34 SCGAIGSFLLWYFVIILVLMFFSRA 58 (243)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHH
Confidence 5567899999998888889999875
No 173
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=53.30 E-value=58 Score=26.69 Aligned_cols=53 Identities=9% Similarity=0.026 Sum_probs=33.3
Q ss_pred eEEeccCCChhHHHHHHHHHhcCC---CceeEecCCCCCchHHHhcCCCCCcccEEEe
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGV---PYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH 58 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi---~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~ 58 (263)
+++|+.++||+|..+.-+++...- ..+...++... .++..+.... ..+|++..
T Consensus 137 I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~-~~~~~~~~~V-~~vPtl~i 192 (215)
T TIGR02187 137 IEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEANE-NPDLAEKYGV-MSVPKIVI 192 (215)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCCC-CHHHHHHhCC-ccCCEEEE
Confidence 567889999999988777665321 23333455443 3444444443 57999985
No 174
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=53.05 E-value=73 Score=22.07 Aligned_cols=58 Identities=12% Similarity=0.014 Sum_probs=33.7
Q ss_pred eEEeccCCChhHHHHHHHHHh----cCCCceeEecCCCCCchHHHhcCCCCCcccEEEe--CCeee
Q 024749 4 VKLHGRLLSPFVCRVIWALKL----KGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH--GGKPV 63 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~----~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~--~g~~l 63 (263)
+..|+.++|+.|+...-.+.. .+-.+....++... .+++.+..-. ..+|++.. +|..+
T Consensus 17 lv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~-~~~l~~~~~v-~~vPt~~i~~~g~~v 80 (97)
T cd02949 17 LVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDIDE-DQEIAEAAGI-MGTPTVQFFKDKELV 80 (97)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCC-CHHHHHHCCC-eeccEEEEEECCeEE
Confidence 456778899999977766644 11124445555543 3344333333 58998873 55443
No 175
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=52.99 E-value=13 Score=35.03 Aligned_cols=72 Identities=15% Similarity=0.050 Sum_probs=42.9
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCC---ceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecc----hHHHHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVP---YEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCE----SMIILEYIEE 75 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~---~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~e----S~aI~~yL~~ 75 (263)
.+++|..+.||||-.+.-+++...+. ++...++-.. .+++.+.... ..||.+..++..+.+ -..+++.+..
T Consensus 119 ~i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~~-~~~~~~~~~v-~~VP~~~i~~~~~~~g~~~~~~~~~~~~~ 196 (517)
T PRK15317 119 HFETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDGAL-FQDEVEARNI-MAVPTVFLNGEEFGQGRMTLEEILAKLDT 196 (517)
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEchh-CHhHHHhcCC-cccCEEEECCcEEEecCCCHHHHHHHHhc
Confidence 47899999999998776666554332 3333334333 3444444443 589999987655433 2345556554
Q ss_pred h
Q 024749 76 M 76 (263)
Q Consensus 76 ~ 76 (263)
.
T Consensus 197 ~ 197 (517)
T PRK15317 197 G 197 (517)
T ss_pred c
Confidence 3
No 176
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=51.18 E-value=68 Score=21.03 Aligned_cols=54 Identities=20% Similarity=0.103 Sum_probs=33.3
Q ss_pred eEEeccCCChhHHHHHHHHHh-----cCCCceeEecCCCCCchHHHhcCCCCCcccEEEe--CCe
Q 024749 4 VKLHGRLLSPFVCRVIWALKL-----KGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH--GGK 61 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~-----~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~--~g~ 61 (263)
+..++.++|+.|+...-.+.. .++.+-...++ . ...+.+.... ..+|++.. +|.
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~--~-~~~~~~~~~v-~~~P~~~~~~~g~ 74 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVKVDVD--E-NPELAEEYGV-RSIPTFLFFKNGK 74 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEEEEECC--C-ChhHHHhcCc-ccccEEEEEECCE
Confidence 456788899999988777766 45544444332 2 3344444444 57999873 554
No 177
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=49.78 E-value=14 Score=34.81 Aligned_cols=71 Identities=17% Similarity=0.109 Sum_probs=41.8
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCC---ceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecc----hHHHHHHHHH
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVP---YEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCE----SMIILEYIEE 75 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~---~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~e----S~aI~~yL~~ 75 (263)
.+++|..+.||||-.+.-+++...+. ++...++-...++. .+.... ..||.+..++..+.+ -..+++.+..
T Consensus 120 ~i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~~~~~~-~~~~~v-~~VP~~~i~~~~~~~g~~~~~~~~~~l~~ 197 (515)
T TIGR03140 120 HFETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDGALFQDE-VEALGI-QGVPAVFLNGEEFHNGRMDLAELLEKLEE 197 (515)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEchhCHHH-HHhcCC-cccCEEEECCcEEEecCCCHHHHHHHHhh
Confidence 47899999999998777666554332 33333444343343 344443 589999987655443 2334455543
No 178
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=49.71 E-value=46 Score=27.72 Aligned_cols=66 Identities=17% Similarity=0.122 Sum_probs=49.5
Q ss_pred ccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHH
Q 024749 8 GRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIE 74 (263)
Q Consensus 8 ~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~ 74 (263)
..+-|++++.+--.|...|++|....|-.+ .-.+-.++.+-. .+.|=|-.+|..+.+...|.+.++
T Consensus 150 ~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSdW-PTfPQlyI~GEFiGGlDIl~~m~~ 216 (227)
T KOG0911|consen 150 EEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSDW-PTFPQLYVKGEFIGGLDILKEMHE 216 (227)
T ss_pred CcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcCC-CCccceeECCEeccCcHHHHHHhh
Confidence 467899999999999999999988877543 112333344555 689999889999888888777554
No 179
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=47.77 E-value=94 Score=22.52 Aligned_cols=59 Identities=15% Similarity=0.080 Sum_probs=36.0
Q ss_pred eEEeccCCChhHHHHHHHHHhcCC---CceeEecCCCCCchHHHhcCCCCCcccEEEe--CCeeec
Q 024749 4 VKLHGRLLSPFVCRVIWALKLKGV---PYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH--GGKPVC 64 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~gi---~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~--~g~~l~ 64 (263)
+..++.++|+.|+.+.-.++...- ......++... ..+..+.... ..+|++.. +|..+.
T Consensus 26 vV~f~a~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~~-~~~l~~~~~v-~~vPt~l~fk~G~~v~ 89 (113)
T cd02989 26 VCHFYHPEFFRCKIMDKHLEILAKKHLETKFIKVNAEK-APFLVEKLNI-KVLPTVILFKNGKTVD 89 (113)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHcCCCEEEEEEccc-CHHHHHHCCC-ccCCEEEEEECCEEEE
Confidence 446678899999977766644211 13445555443 3445555555 69999984 676554
No 180
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=45.67 E-value=65 Score=22.59 Aligned_cols=52 Identities=15% Similarity=-0.045 Sum_probs=30.7
Q ss_pred eEEeccCCChhHHHHHHHH--------HhcCCCceeEecCCCCC---chHHHhcCCCCCcccEEE
Q 024749 4 VKLHGRLLSPFVCRVIWAL--------KLKGVPYEFVAEDLSNK---SDLLLKYNPVHKKIPVLV 57 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L--------~~~gi~~~~~~v~~~~~---~~~~~~~~P~~g~vP~L~ 57 (263)
+..++.++|++|+...-.+ ...+ .+....++.... ..++.+.... ..+|++.
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i-~~~Pti~ 77 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGV-FGPPTYL 77 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCC-CCCCEEE
Confidence 4567888999999775332 2232 455555554421 2445544454 6899887
No 181
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=43.18 E-value=15 Score=27.18 Aligned_cols=62 Identities=13% Similarity=0.047 Sum_probs=38.9
Q ss_pred HHHHHHHHhcCCCceeEecCCCC-CchHHHhcCCCCCcccEEEe---CCeeecchHHHHHHHHHhC
Q 024749 16 CRVIWALKLKGVPYEFVAEDLSN-KSDLLLKYNPVHKKIPVLVH---GGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 16 ~~v~l~L~~~gi~~~~~~v~~~~-~~~~~~~~~P~~g~vP~L~~---~g~~l~eS~aI~~yL~~~~ 77 (263)
..++=+.+..|++.+...++-.. ..++-....|+.|.+|+++| .-.+.-|...|++|++..-
T Consensus 26 ~LakEl~e~~g~~I~~~r~~~~~~l~~e~~~~~~~sGy~PtViD~lrRC~T~EEALEVInylek~G 91 (128)
T PF09868_consen 26 ALAKELEEEEGISIEGYRLDEEQVLEEEEEEPDDFSGYNPTVIDYLRRCKTDEEALEVINYLEKRG 91 (128)
T ss_pred HHHHHHhccCCCceeeeechhhhhhhhccccCCCccCCCChHHHHHHHhCcHHHHHHHHHHHHHhC
Confidence 44555666778877765554221 11121224455589999986 4566788888999998753
No 182
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=42.59 E-value=80 Score=22.69 Aligned_cols=69 Identities=13% Similarity=0.159 Sum_probs=40.3
Q ss_pred EeccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHH---hc---CCCCCcccEEEeCCe-eecchHHHHHHHHHh
Q 024749 6 LHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLL---KY---NPVHKKIPVLVHGGK-PVCESMIILEYIEEM 76 (263)
Q Consensus 6 Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~---~~---~P~~g~vP~L~~~g~-~l~eS~aI~~yL~~~ 76 (263)
|++...||.|.+..-.+......-.+..++.. ....+.. .. +.. ..+-+ ..+|. ...++.|+.+-+...
T Consensus 1 v~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~-~~~g~~~~~G~~A~~~l~~~~ 77 (114)
T PF04134_consen 1 VFYDGDCPLCRREVRFLRRRDRGGRLRFVDIQSEPDQALLASYGISPEDAD-SRLHL-IDDGERVYRGSDAVLRLLRRL 77 (114)
T ss_pred CEECCCCHhHHHHHHHHHhcCCCCCEEEEECCChhhhhHHHhcCcCHHHHc-CeeEE-ecCCCEEEEcHHHHHHHHHHc
Confidence 46677899999888777777653333333432 1111111 11 122 23444 44665 999999999987653
No 183
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=41.91 E-value=35 Score=24.84 Aligned_cols=53 Identities=8% Similarity=0.034 Sum_probs=32.3
Q ss_pred eEEe-ccCCChhHHHHHHHHHhcCCC---ceeEecCCCCCchHHHhcCCCCCcccEEEe
Q 024749 4 VKLH-GRLLSPFVCRVIWALKLKGVP---YEFVAEDLSNKSDLLLKYNPVHKKIPVLVH 58 (263)
Q Consensus 4 ~~Ly-~~~~sp~~~~v~l~L~~~gi~---~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~ 58 (263)
+.++ +-++||+|+.++-.++...-. .+...++.. ..++..+.... ..+|++..
T Consensus 25 vvv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d-~~~~l~~~~~v-~~vPt~~i 81 (113)
T cd02975 25 LVVFSSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFD-EDKEKAEKYGV-ERVPTTIF 81 (113)
T ss_pred EEEEeCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCC-cCHHHHHHcCC-CcCCEEEE
Confidence 3444 567999999887776643221 233444443 34555555555 68999984
No 184
>PF08632 Zds_C: Activator of mitotic machinery Cdc14 phosphatase activation C-term; InterPro: IPR013941 This region of the Zds1 protein is critical for sporulation and has also been shown to suppress the calcium sensitivity of Zds1 deletions []. The C-terminal motif is common to both Zds1 and Zds2 proteins, both of which are putative interactors of Cdc55 and are required for the completion of mitotic exit and cytokinesis. They both contribute to timely Cdc14 activation during mitotic exit and are required downstream of separase to facilitate nucleolar Cdc14 release[].
Probab=38.95 E-value=27 Score=21.62 Aligned_cols=14 Identities=43% Similarity=0.973 Sum_probs=10.4
Q ss_pred hhHHHHHHHHHHHH
Q 024749 233 SHFVLVLFMYWCLK 246 (263)
Q Consensus 233 ~~~~~~~~~~~~~~ 246 (263)
.-+.++.|||||+-
T Consensus 37 ~QVllSNfMy~YL~ 50 (53)
T PF08632_consen 37 QQVLLSNFMYWYLN 50 (53)
T ss_pred HHHHHHHHHHHHHH
Confidence 34667889999974
No 185
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=37.72 E-value=96 Score=23.26 Aligned_cols=68 Identities=19% Similarity=0.125 Sum_probs=42.3
Q ss_pred cCCChhHHHH----HHHHHhcCCCceeEecCCCCCchHHHhcCCC-----C-CcccEEEe-C--CeeecchHHHHHHHHH
Q 024749 9 RLLSPFVCRV----IWALKLKGVPYEFVAEDLSNKSDLLLKYNPV-----H-KKIPVLVH-G--GKPVCESMIILEYIEE 75 (263)
Q Consensus 9 ~~~sp~~~~v----~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~-----~-g~vP~L~~-~--g~~l~eS~aI~~yL~~ 75 (263)
-++||.|.++ +=++.+..-+..++.+...+++.|-...||+ . .-||+|.- + +..+.+...-...|.+
T Consensus 42 qSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~Wk~p~n~FR~d~~~lt~vPTLlrw~~~~~rL~~~q~~~~~Lve 121 (128)
T KOG3425|consen 42 QSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYWKDPANPFRKDPGILTAVPTLLRWKRQPQRLDGLQCLNDHLVE 121 (128)
T ss_pred CcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcccCCCCccccCCCceeecceeeEEcCccccchHhHhhHHHHHH
Confidence 4589999854 4556666777777777777665554444443 0 25788873 3 3556666666666654
Q ss_pred h
Q 024749 76 M 76 (263)
Q Consensus 76 ~ 76 (263)
.
T Consensus 122 ~ 122 (128)
T KOG3425|consen 122 M 122 (128)
T ss_pred H
Confidence 3
No 186
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=36.12 E-value=53 Score=25.86 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=27.0
Q ss_pred eeEEeccCCChhHH----HHHHHHHhc-CCCceeEecCCCC
Q 024749 3 EVKLHGRLLSPFVC----RVIWALKLK-GVPYEFVAEDLSN 38 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~----~v~l~L~~~-gi~~~~~~v~~~~ 38 (263)
++++|+...||||. +++-+++.. ++.++.+++.+..
T Consensus 1 ~i~~~~D~~Cp~cy~~~~~l~~l~~~~~~~~i~~~p~~l~~ 41 (193)
T PF01323_consen 1 TIEFFFDFICPWCYLASPRLRKLRAEYPDVEIEWRPFPLRP 41 (193)
T ss_dssp EEEEEEBTTBHHHHHHHHHHHHHHHHHTTCEEEEEEESSST
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhcCCcEEEecccccc
Confidence 47899999999998 444555555 8888888887653
No 187
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=36.06 E-value=1.6e+02 Score=22.79 Aligned_cols=74 Identities=15% Similarity=-0.031 Sum_probs=45.6
Q ss_pred eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCC-CCchHHHhcCCCCCcccEEEeCCeee---cchHHHHHHHHHhC
Q 024749 3 EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLS-NKSDLLLKYNPVHKKIPVLVHGGKPV---CESMIILEYIEEMW 77 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~-~~~~~~~~~~P~~g~vP~L~~~g~~l---~eS~aI~~yL~~~~ 77 (263)
++..|..+.|+.|..-.=.++.+|.+++....+-. ..+..+--...+ +.--+.+.+|..+ .-..+|.+.|++..
T Consensus 27 ~~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~~alK~~~gIp~e~-~SCHT~VI~Gy~vEGHVPa~aI~~ll~~~p 104 (149)
T COG3019 27 EMVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDFLALKRRLGIPYEM-QSCHTAVINGYYVEGHVPAEAIARLLAEKP 104 (149)
T ss_pred eEEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcHHHHHHhcCCChhh-ccccEEEEcCEEEeccCCHHHHHHHHhCCC
Confidence 58899999999888777777777777665544322 101111101112 3445566677554 45678999998876
No 188
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=35.55 E-value=1e+02 Score=22.44 Aligned_cols=16 Identities=13% Similarity=0.227 Sum_probs=12.5
Q ss_pred eEEeccCCChhHHHHH
Q 024749 4 VKLHGRLLSPFVCRVI 19 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~ 19 (263)
+..++.++||+|++..
T Consensus 18 lv~f~a~wC~~C~~~~ 33 (125)
T cd02951 18 LLLFSQPGCPYCDKLK 33 (125)
T ss_pred EEEEeCCCCHHHHHHH
Confidence 4566888999999765
No 189
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=34.36 E-value=95 Score=21.20 Aligned_cols=57 Identities=14% Similarity=0.092 Sum_probs=33.2
Q ss_pred eEEeccCCChhHHHHHHHHHhc----CCCceeEecCCCCCchHHHhcCCCCCcccEEE--eCCee
Q 024749 4 VKLHGRLLSPFVCRVIWALKLK----GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLV--HGGKP 62 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~----gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~--~~g~~ 62 (263)
+..++.++|+.|+...-.++.. +-.+....++... ...+.+.... ..+|+++ .+|..
T Consensus 16 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~-~~~l~~~~~i-~~~Pt~~~~~~g~~ 78 (96)
T cd02956 16 VVDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCDA-QPQIAQQFGV-QALPTVYLFAAGQP 78 (96)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEeccC-CHHHHHHcCC-CCCCEEEEEeCCEE
Confidence 3455778999999775555432 1124444555443 4455444444 5899998 35543
No 190
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=32.98 E-value=1.6e+02 Score=20.00 Aligned_cols=57 Identities=11% Similarity=0.042 Sum_probs=34.4
Q ss_pred eEEeccCCChhHHHHHHHHHhc----CCCceeEecCCCCCchHHHhcCCCCCcccEEEe--CCee
Q 024749 4 VKLHGRLLSPFVCRVIWALKLK----GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH--GGKP 62 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~----gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~--~g~~ 62 (263)
+..++.++|+.|++..-.+... +..+....++....++...+.+. ..+|++.. +|..
T Consensus 18 ~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~~~~~~~~~~i--~~~Pt~~~~~~g~~ 80 (97)
T cd02984 18 VLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAEELPEISEKFEI--TAVPTFVFFRNGTI 80 (97)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEccccCHHHHHhcCC--ccccEEEEEECCEE
Confidence 4566788999999876665542 33455555655443333334444 47999873 5543
No 191
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=31.70 E-value=1.9e+02 Score=20.52 Aligned_cols=53 Identities=9% Similarity=0.089 Sum_probs=30.1
Q ss_pred eEEeccCCChhHHHHHHHHHh-----cCCCceeEecCCCCCchHHH-hcCCCCCcccEEE
Q 024749 4 VKLHGRLLSPFVCRVIWALKL-----KGVPYEFVAEDLSNKSDLLL-KYNPVHKKIPVLV 57 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~-----~gi~~~~~~v~~~~~~~~~~-~~~P~~g~vP~L~ 57 (263)
+..++.++||.|++..-.+.. .+..+....++.......+. +.... ..+|++.
T Consensus 25 lv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d~~~~~~~~~~~~v-~~~Pti~ 83 (109)
T cd02993 25 LVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNADGEQREFAKEELQL-KSFPTIL 83 (109)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECCccchhhHHhhcCC-CcCCEEE
Confidence 556788899999966543332 33344444555443122232 23444 6899887
No 192
>PRK09266 hypothetical protein; Provisional
Probab=30.45 E-value=87 Score=26.56 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=39.2
Q ss_pred HHHhcCCCceeEecCCC---CCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhC
Q 024749 21 ALKLKGVPYEFVAEDLS---NKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 21 ~L~~~gi~~~~~~v~~~---~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~ 77 (263)
.+...|++++++.++.. +.++.|. .|...|-+|+-..++..+.....|.+.|.+.|
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfl-tnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~ 258 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFA-CNAWRGQRAVSAIDDVALPDSHALLELLRRAY 258 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhh-hcCccceEEEEEECCEECCCCchHHHHHHHHH
Confidence 44556999999988865 3334444 44433899999988877765567877777665
No 193
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=29.48 E-value=2.1e+02 Score=20.39 Aligned_cols=56 Identities=9% Similarity=0.022 Sum_probs=31.3
Q ss_pred eEEeccCCChhHHHHHHHH-----HhcCCCceeEecCCCCCchHHHhcCCCCCcccEEE--eCCe
Q 024749 4 VKLHGRLLSPFVCRVIWAL-----KLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLV--HGGK 61 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L-----~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~--~~g~ 61 (263)
+..++.++|+.|+...-.+ ++.+..+....++... .+...+.... ..+|++. .+|.
T Consensus 28 lV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~-~~~l~~~~~V-~~~Pt~~i~~~g~ 90 (111)
T cd02963 28 LIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGH-ERRLARKLGA-HSVPAIVGIINGQ 90 (111)
T ss_pred EEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEeccc-cHHHHHHcCC-ccCCEEEEEECCE
Confidence 3456788999998554332 2233344445555443 2334444444 6899988 3553
No 194
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=29.31 E-value=66 Score=19.46 Aligned_cols=38 Identities=24% Similarity=0.397 Sum_probs=27.6
Q ss_pred hHHHHHHHHHhcChhhhhhCCCcchHHHHHhhhhcCCC
Q 024749 182 PSLHTWFENFKQVPEIEENFPNRDDIWFISNIAVNSGW 219 (263)
Q Consensus 182 p~L~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 219 (263)
..+.++++++.+.|.+++-+................|+
T Consensus 4 ~~l~~Fl~~~~~d~~l~~~l~~~~~~~e~~~lA~~~Gy 41 (49)
T PF07862_consen 4 ESLKAFLEKVKSDPELREQLKACQNPEEVVALAREAGY 41 (49)
T ss_pred HHHHHHHHHHhcCHHHHHHHHhcCCHHHHHHHHHHcCC
Confidence 46899999999999999988776665444444444443
No 195
>PTZ00051 thioredoxin; Provisional
Probab=27.71 E-value=2e+02 Score=19.53 Aligned_cols=57 Identities=11% Similarity=-0.009 Sum_probs=32.3
Q ss_pred eEEeccCCChhHHHHHHHHHhc---CCCceeEecCCCCCchHHHhcCCCCCcccEEEe--CCee
Q 024749 4 VKLHGRLLSPFVCRVIWALKLK---GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH--GGKP 62 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~---gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~--~g~~ 62 (263)
+..++.++|+.|+...-.++.. ...+....++... ...+.+.... ..+|+++. +|..
T Consensus 22 li~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~~-~~~~~~~~~v-~~~Pt~~~~~~g~~ 83 (98)
T PTZ00051 22 IVDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDVDE-LSEVAEKENI-TSMPTFKVFKNGSV 83 (98)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEECcc-hHHHHHHCCC-ceeeEEEEEeCCeE
Confidence 4567888999999775544432 2223344444332 3444444444 58999873 5533
No 196
>PRK09381 trxA thioredoxin; Provisional
Probab=27.52 E-value=2.2e+02 Score=19.92 Aligned_cols=57 Identities=9% Similarity=-0.076 Sum_probs=31.8
Q ss_pred eEEeccCCChhHHHHHHHHHh----cCCCceeEecCCCCCchHHHhcCCCCCcccEEEe--CCee
Q 024749 4 VKLHGRLLSPFVCRVIWALKL----KGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH--GGKP 62 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~----~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~--~g~~ 62 (263)
+..++.++||.|+...-.++. .+-.+....++.... +...+.... ..+|+++. +|..
T Consensus 25 vv~f~~~~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~~~-~~~~~~~~v-~~~Pt~~~~~~G~~ 87 (109)
T PRK09381 25 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN-PGTAPKYGI-RGIPTLLLFKNGEV 87 (109)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCCcEEEEEECCCC-hhHHHhCCC-CcCCEEEEEeCCeE
Confidence 345677799999977533322 222355555655533 333333333 58999873 5543
No 197
>PF09236 AHSP: Alpha-haemoglobin stabilising protein; InterPro: IPR015317 Alpha-haemoglobin stabilising protein (AHSP) acts a molecular chaperone for free alpha-haemoglobin, preventing the harmful aggregation of alpha-haemoglobin during normal erythroid cell development: it specifically protects free alpha-haemoglobin from precipitation. AHSP adopts a helical secondary structure consisting of an elongated antiparallel three alpha-helix bundle []. ; GO: 0030492 hemoglobin binding, 0006457 protein folding, 0020027 hemoglobin metabolic process, 0030097 hemopoiesis, 0050821 protein stabilization; PDB: 1Y01_A 1XZY_A 3OVU_A 1W0A_A 3IA3_C 1Z8U_A 1W0B_A 1W09_A.
Probab=25.73 E-value=1.1e+02 Score=21.23 Aligned_cols=41 Identities=24% Similarity=0.307 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHH
Q 024749 89 DRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTL 134 (263)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L 134 (263)
....++.|.++.-+. .++.... .+...+++..++...|..|
T Consensus 33 MvtvV~DwvnfYINY----y~~~~~G-eqqeqdrAlqel~qeL~tl 73 (89)
T PF09236_consen 33 MVTVVNDWVNFYINY----YKKQMTG-EQQEQDRALQELQQELNTL 73 (89)
T ss_dssp HHHHHHHHHHHHHHH----HHTT--S-SHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HHHHhcC-ChHHHHHHHHHHHHHHHHH
Confidence 445566666554322 2222222 5677788888888877777
No 198
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=25.51 E-value=2.3e+02 Score=19.50 Aligned_cols=53 Identities=9% Similarity=-0.056 Sum_probs=29.9
Q ss_pred eEEeccCCChhHHHHHHHHHhc----CCCceeEecCCCCCchHHHhcCCCCCcccEEEe
Q 024749 4 VKLHGRLLSPFVCRVIWALKLK----GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH 58 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~----gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~ 58 (263)
+..++.++|+.|+...-.+... +-.+....++... .+...+.... ..+|++..
T Consensus 22 ~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~~~-~~~~~~~~~v-~~~Pt~~~ 78 (101)
T cd03003 22 FVNFYSPRCSHCHDLAPTWREFAKEMDGVIRIGAVNCGD-DRMLCRSQGV-NSYPSLYV 78 (101)
T ss_pred EEEEECCCChHHHHhHHHHHHHHHHhcCceEEEEEeCCc-cHHHHHHcCC-CccCEEEE
Confidence 4466788999998655444322 1124445555543 3344433343 68999874
No 199
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=25.20 E-value=94 Score=24.93 Aligned_cols=22 Identities=18% Similarity=0.111 Sum_probs=18.0
Q ss_pred eeEEeccCCChhHHHHHHHHHh
Q 024749 3 EVKLHGRLLSPFVCRVIWALKL 24 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~ 24 (263)
.+.+|..+.||||++..-.+..
T Consensus 80 ~i~~f~D~~Cp~C~~~~~~l~~ 101 (197)
T cd03020 80 VVYVFTDPDCPYCRKLEKELKP 101 (197)
T ss_pred EEEEEECCCCccHHHHHHHHhh
Confidence 3667888999999999877764
No 200
>PTZ00443 Thioredoxin domain-containing protein; Provisional
Probab=25.00 E-value=4e+02 Score=22.13 Aligned_cols=73 Identities=12% Similarity=-0.006 Sum_probs=41.2
Q ss_pred eEEeccCCChhHHHHHHHHHhc----CCCceeEecCCCCCchHHHhcCCCCCcccEEE--eCCeee------cchHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALKLK----GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLV--HGGKPV------CESMIILE 71 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~~----gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~--~~g~~l------~eS~aI~~ 71 (263)
+..++-++||.|+...=.++.. +-.+....++... .+...+.... ..+|++. .+|..+ .....|.+
T Consensus 56 lV~FyApWC~~Ck~~~P~~e~la~~~~~~v~~~~VD~~~-~~~l~~~~~I-~~~PTl~~f~~G~~v~~~~G~~s~e~L~~ 133 (224)
T PTZ00443 56 FVKFYAPWCSHCRKMAPAWERLAKALKGQVNVADLDATR-ALNLAKRFAI-KGYPTLLLFDKGKMYQYEGGDRSTEKLAA 133 (224)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEecCcc-cHHHHHHcCC-CcCCEEEEEECCEEEEeeCCCCCHHHHHH
Confidence 3566788999998654443321 2123444444433 3444444444 5899987 355432 24566777
Q ss_pred HHHHhCC
Q 024749 72 YIEEMWP 78 (263)
Q Consensus 72 yL~~~~~ 78 (263)
|+.+.+.
T Consensus 134 fi~~~~~ 140 (224)
T PTZ00443 134 FALGDFK 140 (224)
T ss_pred HHHHHHH
Confidence 7777664
No 201
>PF06110 DUF953: Eukaryotic protein of unknown function (DUF953); InterPro: IPR010357 This family consists of several hypothetical eukaryotic proteins of unknown function that are thioredoxin-like.; PDB: 1V9W_A 1WOU_A.
Probab=24.69 E-value=69 Score=23.86 Aligned_cols=60 Identities=15% Similarity=0.178 Sum_probs=27.8
Q ss_pred ccCCChhHHHHHHHHHh----cCCCceeEecCCCCCch------HHHh--cCCCCCcccEEEe--CCeeecchHH
Q 024749 8 GRLLSPFVCRVIWALKL----KGVPYEFVAEDLSNKSD------LLLK--YNPVHKKIPVLVH--GGKPVCESMI 68 (263)
Q Consensus 8 ~~~~sp~~~~v~l~L~~----~gi~~~~~~v~~~~~~~------~~~~--~~P~~g~vP~L~~--~g~~l~eS~a 68 (263)
+.++||.|+++.-.++. ..-....+.+...+++. .|++ .--. ..||+|.- ++..|.|...
T Consensus 34 g~sWCPDC~~aep~v~~~f~~~~~~~~lv~v~VG~r~~Wkdp~n~fR~~p~~~l-~~IPTLi~~~~~~rL~e~e~ 107 (119)
T PF06110_consen 34 GQSWCPDCVAAEPVVEKAFKKAPENARLVYVEVGDRPEWKDPNNPFRTDPDLKL-KGIPTLIRWETGERLVEEEC 107 (119)
T ss_dssp S-BSSHHHHHHHHHHHHHHHH-STTEEEEEEE---HHHHC-TTSHHHH--CC----SSSEEEECTSS-EEEHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHhCCCCceEEEEEcCCHHHhCCCCCCceEcceeee-eecceEEEECCCCccchhhh
Confidence 35689999977644433 22234444444443322 2322 1122 47999984 4455555443
No 202
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=24.17 E-value=1.3e+02 Score=25.92 Aligned_cols=58 Identities=10% Similarity=-0.005 Sum_probs=42.4
Q ss_pred hHHHHHHHHHhcCCCceeEecCCCC-CchHHH---hc-CCCCCcccEEEeCCeeecchHHHHHH
Q 024749 14 FVCRVIWALKLKGVPYEFVAEDLSN-KSDLLL---KY-NPVHKKIPVLVHGGKPVCESMIILEY 72 (263)
Q Consensus 14 ~~~~v~l~L~~~gi~~~~~~v~~~~-~~~~~~---~~-~P~~g~vP~L~~~g~~l~eS~aI~~y 72 (263)
-|..||.+|+-.+|.|+++.|++.. ..+|+. +. .-. -.+|.+-.+|..|.....|.+-
T Consensus 149 ~C~~VR~ilesf~V~v~ERDVSMd~~fr~EL~~~lg~~~~~-~~LPrVFV~GryIGgaeeV~~L 211 (281)
T KOG2824|consen 149 DCNAVRAILESFRVKVDERDVSMDSEFREELQELLGEDEKA-VSLPRVFVKGRYIGGAEEVVRL 211 (281)
T ss_pred HHHHHHHHHHhCceEEEEecccccHHHHHHHHHHHhccccc-CccCeEEEccEEeccHHHhhhh
Confidence 3889999999999999999999882 233332 22 112 4789766788888877777763
No 203
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=23.69 E-value=66 Score=26.89 Aligned_cols=22 Identities=5% Similarity=0.081 Sum_probs=17.6
Q ss_pred eeEEeccCCChhHHHHHHHHHh
Q 024749 3 EVKLHGRLLSPFVCRVIWALKL 24 (263)
Q Consensus 3 ~~~Ly~~~~sp~~~~v~l~L~~ 24 (263)
.+..|..+.||||++..--+..
T Consensus 110 ~I~vFtDp~CpyCkkl~~~l~~ 131 (232)
T PRK10877 110 VITVFTDITCGYCHKLHEQMKD 131 (232)
T ss_pred EEEEEECCCChHHHHHHHHHHH
Confidence 3678899999999998766554
No 204
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=23.30 E-value=3.2e+02 Score=22.20 Aligned_cols=53 Identities=9% Similarity=0.022 Sum_probs=32.0
Q ss_pred eEEecc---CCChhHHHHHHHHHhc-----CCCceeEecCCCCCchHHHhcCCCCCcccEEEe
Q 024749 4 VKLHGR---LLSPFVCRVIWALKLK-----GVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH 58 (263)
Q Consensus 4 ~~Ly~~---~~sp~~~~v~l~L~~~-----gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~ 58 (263)
+.++.. ++||.|+.+.=.++.. ++.+....++.+ ...+..+..-. ..+|++..
T Consensus 23 i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~-~~~~l~~~~~V-~~~Pt~~~ 83 (215)
T TIGR02187 23 IVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTP-EDKEEAEKYGV-ERVPTTII 83 (215)
T ss_pred EEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCc-ccHHHHHHcCC-CccCEEEE
Confidence 567766 8999999776666544 233334444432 24444444444 58999984
No 205
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=23.12 E-value=3.4e+02 Score=24.99 Aligned_cols=161 Identities=17% Similarity=0.123 Sum_probs=81.1
Q ss_pred CCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHH-HHhC---CCCCCCCC
Q 024749 10 LLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYI-EEMW---PQNPLMPN 85 (263)
Q Consensus 10 ~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL-~~~~---~~~~l~p~ 85 (263)
.+||..-++-+.++.+.+-=-+-+. +|+-|+.++++.-+ ..-++-+ .-++ ++.=+.|.
T Consensus 187 TGsp~VgkIim~aAaKhLTPvtLEL---------------GGKsP~~vd~~~d~---~ia~~RI~~gk~~N~GQtCvapD 248 (477)
T KOG2456|consen 187 TGSPRVGKIIMAAAAKHLTPVTLEL---------------GGKSPCYVDKNCDL---KIAARRIAWGKWMNSGQTCVAPD 248 (477)
T ss_pred cCCchHHHHHHHHHHhcCCcEEEEc---------------CCCCCeeecCCcCH---HHHHHHHHHHhhccCCCeeccCC
Confidence 3799999999988888764322222 48999999866421 1112212 1122 11112232
Q ss_pred CH-HHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHH-HHHHHHHHHcccCC-CccccCCCCCHHHHHHHHHHH
Q 024749 86 NP-YDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEI-LEILQTLEEHGLRE-RNFFNGDNIGLVDIAFGSMLY 162 (263)
Q Consensus 86 ~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~L~e~~L~~-~~fl~G~~~T~ADi~l~~~l~ 162 (263)
-- -.+.....+++.+ ...+..+|+. +.........-+ .+.++.+ ...|++ ++-..|.+-.-+|..+.|++-
T Consensus 249 YiL~~k~~~~kli~al----k~~l~eFYG~-n~~eS~d~sRiIn~~hf~Rl-~~ll~~~~kv~~Gg~~d~~d~~I~PTIL 322 (477)
T KOG2456|consen 249 YILCSKSIQPKLIDAL----KSTLKEFYGE-NPKESKDLSRIINQRHFQRL-SALLDETGKVAIGGESDESDRYIAPTIL 322 (477)
T ss_pred eEEecHhhhHHHHHHH----HHHHHHHhCC-CccccccHHHHhhHHHHHHH-HHHhcCCCceecCCccchhhcccCCeEE
Confidence 00 0111111222222 2233345544 333333332222 3567778 777876 777788888888888777543
Q ss_pred -HHH-----HHhhhccccccCCCCChHHHHHHHHHhcCh
Q 024749 163 -WMQ-----VIGDVVGVKLFDSHKFPSLHTWFENFKQVP 195 (263)
Q Consensus 163 -~~~-----~~~~~~~~~~~~~~~~p~L~~w~~~~~~~p 195 (263)
... .-.+.+|+-++ --...++.+=++-+.+++
T Consensus 323 ~DV~~~~p~M~eEIFGPiLP-Ii~v~~l~Eai~~In~~e 360 (477)
T KOG2456|consen 323 LDVPEDSPVMQEEIFGPILP-IITVQSLDEAINFINERE 360 (477)
T ss_pred ecCCCCChhhhhhhccCccc-eeEhhhHHHHHHHHhcCC
Confidence 110 11333454432 234556666666665544
No 206
>PF13728 TraF: F plasmid transfer operon protein
Probab=22.58 E-value=2.8e+02 Score=22.80 Aligned_cols=52 Identities=15% Similarity=0.001 Sum_probs=33.4
Q ss_pred eEEeccCCChhHH----HHHHHHHhcCCCceeEecCCC--------CCchHH-HhcCCCCCcccEEE
Q 024749 4 VKLHGRLLSPFVC----RVIWALKLKGVPYEFVAEDLS--------NKSDLL-LKYNPVHKKIPVLV 57 (263)
Q Consensus 4 ~~Ly~~~~sp~~~----~v~l~L~~~gi~~~~~~v~~~--------~~~~~~-~~~~P~~g~vP~L~ 57 (263)
+.+++...||+|+ .++.+....|+++..+.+|-. ..+... .+.+. ..+|+|.
T Consensus 124 L~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp~~~~~~g~~~~l~v--~~~Pal~ 188 (215)
T PF13728_consen 124 LFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSFPNPRPDPGQAKRLGV--KVTPALF 188 (215)
T ss_pred EEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCCCCCCCCHHHHHHcCC--CcCCEEE
Confidence 5667778999998 455666667888777766522 112223 34455 5899987
No 207
>TIGR01126 pdi_dom protein disulfide-isomerase domain. This model describes a domain of eukaryotic protein disulfide isomerases, generally found in two copies. The high cutoff for total score reflects the expectation of finding both copies. The domain is similar to thioredoxin but the redox-active disulfide region motif is APWCGHCK.
Probab=22.33 E-value=95 Score=21.20 Aligned_cols=52 Identities=12% Similarity=-0.043 Sum_probs=29.2
Q ss_pred eEEeccCCChhHHHHHHHHHh-----cCC-CceeEecCCCCCchHHHhcCCCCCcccEEE
Q 024749 4 VKLHGRLLSPFVCRVIWALKL-----KGV-PYEFVAEDLSNKSDLLLKYNPVHKKIPVLV 57 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~-----~gi-~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~ 57 (263)
+..++.++|+.|+...-.++. .+- .+....++. +....+.+.... ..+|++.
T Consensus 17 ~i~f~~~~C~~c~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~i-~~~P~~~ 74 (102)
T TIGR01126 17 LVEFYAPWCGHCKNLAPEYEKLAKELKGDPDIVLAKVDA-TAEKDLASRFGV-SGFPTIK 74 (102)
T ss_pred EEEEECCCCHHHHhhChHHHHHHHHhccCCceEEEEEEc-cchHHHHHhCCC-CcCCEEE
Confidence 567788899999875433322 221 133333333 334455444444 5899886
No 208
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=22.27 E-value=98 Score=21.83 Aligned_cols=20 Identities=15% Similarity=0.135 Sum_probs=13.4
Q ss_pred eEEeccCCChhHHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALK 23 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~ 23 (263)
+.+++.++||+|++..-.+.
T Consensus 9 v~~F~~~~C~~C~~~~~~~~ 28 (112)
T PF13098_consen 9 VVVFTDPWCPYCKKLEKELF 28 (112)
T ss_dssp EEEEE-TT-HHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHH
Confidence 45678899999998755554
No 209
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=22.25 E-value=4.3e+02 Score=22.44 Aligned_cols=67 Identities=21% Similarity=0.174 Sum_probs=38.2
Q ss_pred chHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHhcccChhHHHHHHHHHHHHHHHHHHccc
Q 024749 65 ESMIILEYIEEMWPQNPLMPNNPYDRALARFWIKFAEDKLVVAILKLFRSITGQELENAKKEILEILQTLEEHGL 139 (263)
Q Consensus 65 eS~aI~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~e~~L 139 (263)
|-..|-..+.|+-. ...-|+|+...+++.+.+.-.-+..+-....++ ..+.+++++...++.| |..|
T Consensus 5 E~qLI~~lf~RL~~-ae~~prD~eAe~lI~~~~~~qP~A~Y~laQ~vl------vQE~AL~~a~~ri~eL-e~ql 71 (247)
T PF09849_consen 5 ERQLIDDLFSRLKQ-AEAQPRDPEAEALIAQALARQPDAPYYLAQTVL------VQEQALKQAQARIQEL-EAQL 71 (247)
T ss_pred HHHHHHHHHHHHHh-ccCCCCCHHHHHHHHHHHHhCCchHHHHHHHHH------HHHHHHHHHHHHHHHH-HHHH
Confidence 34445555555542 112388887777776655543332222222222 3477788888888888 7775
No 210
>cd02987 Phd_like_Phd Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.
Probab=21.76 E-value=4.1e+02 Score=20.99 Aligned_cols=59 Identities=14% Similarity=-0.031 Sum_probs=33.5
Q ss_pred EEeccCCChhHHHHHHHHH---hcCCCceeEecCCCCCchHHHhcCCCCCcccEEEe--CCeeecch
Q 024749 5 KLHGRLLSPFVCRVIWALK---LKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH--GGKPVCES 66 (263)
Q Consensus 5 ~Ly~~~~sp~~~~v~l~L~---~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~--~g~~l~eS 66 (263)
..++.++||.|+.+--.|. ..--.+....++.... ......+. ..+|++.. +|..+..-
T Consensus 88 V~Fya~wc~~Ck~m~~~l~~LA~~~~~vkF~kVd~d~~--~l~~~f~v-~~vPTlllyk~G~~v~~~ 151 (175)
T cd02987 88 VHIYEPGIPGCAALNSSLLCLAAEYPAVKFCKIRASAT--GASDEFDT-DALPALLVYKGGELIGNF 151 (175)
T ss_pred EEEECCCCchHHHHHHHHHHHHHHCCCeEEEEEeccch--hhHHhCCC-CCCCEEEEEECCEEEEEE
Confidence 3457789999985543222 1112344555554432 44455665 68999984 77665433
No 211
>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein. It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.
Probab=21.75 E-value=2.3e+02 Score=20.83 Aligned_cols=56 Identities=14% Similarity=0.071 Sum_probs=32.2
Q ss_pred EeccCCChhHHHHHHHHHhcCCC----ceeEecCCCCCchHHHhcCCCCCcccEEEe--CCeee
Q 024749 6 LHGRLLSPFVCRVIWALKLKGVP----YEFVAEDLSNKSDLLLKYNPVHKKIPVLVH--GGKPV 63 (263)
Q Consensus 6 Ly~~~~sp~~~~v~l~L~~~gi~----~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~--~g~~l 63 (263)
-++-.+||.|+...=.++..--. .....++.+. .++.....-. ..+|++.. +|..+
T Consensus 20 ~F~A~WCgpCk~m~P~le~la~~~~~~v~f~kVDvD~-~~~la~~~~V-~~iPTf~~fk~G~~v 81 (114)
T cd02954 20 RFGRDWDPVCMQMDEVLAKIAEDVSNFAVIYLVDIDE-VPDFNKMYEL-YDPPTVMFFFRNKHM 81 (114)
T ss_pred EEECCCChhHHHHHHHHHHHHHHccCceEEEEEECCC-CHHHHHHcCC-CCCCEEEEEECCEEE
Confidence 36778999999765555332211 2344555543 3455444443 57999984 66543
No 212
>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX. TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.
Probab=21.63 E-value=1.1e+02 Score=21.11 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=30.3
Q ss_pred eEEeccCCChhHHHHHHHHHh-----cCCCceeEecCCCCCchHHHhcCCCCCcccEEEe
Q 024749 4 VKLHGRLLSPFVCRVIWALKL-----KGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVH 58 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~~-----~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~ 58 (263)
+..++.++||.|+...=.+.. .+..+....++... .+.+.+.... ..+|++..
T Consensus 20 lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~-~~~~~~~~~i-~~~Pt~~~ 77 (101)
T cd02994 20 MIEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVTQ-EPGLSGRFFV-TALPTIYH 77 (101)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHhhccCCeEEEEEEccC-CHhHHHHcCC-cccCEEEE
Confidence 456678899999865533332 23334444555433 3344444444 58999974
No 213
>KOG2501 consensus Thioredoxin, nucleoredoxin and related proteins [General function prediction only]
Probab=21.31 E-value=2e+02 Score=22.63 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=22.5
Q ss_pred EEe-ccCCChhHH-------HHHHHHHhcCCCceeEecCCC
Q 024749 5 KLH-GRLLSPFVC-------RVIWALKLKGVPYEFVAEDLS 37 (263)
Q Consensus 5 ~Ly-~~~~sp~~~-------~v~l~L~~~gi~~~~~~v~~~ 37 (263)
.|| +..+||.|+ ...=.+...+-|++++.|+.+
T Consensus 37 ~lyFsA~wC~pCR~FTP~Lk~fYe~l~~~~~~fEVvfVS~D 77 (157)
T KOG2501|consen 37 GLYFSAHWCPPCRDFTPILKDFYEELKDNAAPFEVVFVSSD 77 (157)
T ss_pred EEEEEEEECCchhhCCchHHHHHHHHHhcCCceEEEEEecC
Confidence 455 445788777 444455566778999998876
No 214
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=20.81 E-value=2.3e+02 Score=18.74 Aligned_cols=25 Identities=24% Similarity=0.369 Sum_probs=20.6
Q ss_pred cccEEEeCCeeecchHHHHHHHHHhC
Q 024749 52 KIPVLVHGGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 52 ~vP~L~~~g~~l~eS~aI~~yL~~~~ 77 (263)
+=|++...| ..+|-.+|.+|+....
T Consensus 15 ~dPVi~~~G-~tyer~~I~~~l~~~~ 39 (73)
T PF04564_consen 15 RDPVILPSG-HTYERSAIERWLEQNG 39 (73)
T ss_dssp SSEEEETTS-EEEEHHHHHHHHCTTS
T ss_pred hCceeCCcC-CEEcHHHHHHHHHcCC
Confidence 568887777 7899999999999833
No 215
>PHA03075 glutaredoxin-like protein; Provisional
Probab=20.46 E-value=1.8e+02 Score=21.70 Aligned_cols=69 Identities=16% Similarity=0.125 Sum_probs=46.8
Q ss_pred Cc-eeEEeccCCChhHHHHHHHHHhcCCCceeEecCCCCCchHHHhcCCCCCcccEEEeCCeeecchHHHHHHHHHhC
Q 024749 1 MA-EVKLHGRLLSPFVCRVIWALKLKGVPYEFVAEDLSNKSDLLLKYNPVHKKIPVLVHGGKPVCESMIILEYIEEMW 77 (263)
Q Consensus 1 Ms-~~~Ly~~~~sp~~~~v~l~L~~~gi~~~~~~v~~~~~~~~~~~~~P~~g~vP~L~~~g~~l~eS~aI~~yL~~~~ 77 (263)
|- .+.|+|-+.|+-|+.+.-+|....=+|+...++.-.. |.+ .|++-+|..++.. .=-.++.+|+...+
T Consensus 1 mK~tLILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlSf---FsK----~g~v~~lg~d~~y-~lInn~~~~lgne~ 70 (123)
T PHA03075 1 MKKTLILFGKPLCSVCESISEALKELEDEYDILRVNILSF---FSK----DGQVKVLGMDKGY-TLINNFFKHLGNEY 70 (123)
T ss_pred CCceEEEeCCcccHHHHHHHHHHHHhhccccEEEEEeeee---ecc----CCceEEEecccce-ehHHHHHHhhcccE
Confidence 44 5789999999999999999988888899988875421 111 1677777754322 22345666666433
No 216
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=20.13 E-value=83 Score=26.64 Aligned_cols=20 Identities=10% Similarity=0.107 Sum_probs=16.4
Q ss_pred eEEeccCCChhHHHHHHHHH
Q 024749 4 VKLHGRLLSPFVCRVIWALK 23 (263)
Q Consensus 4 ~~Ly~~~~sp~~~~v~l~L~ 23 (263)
+..|..+.||||++.+--+.
T Consensus 121 I~vFtDp~CpyC~kl~~~l~ 140 (251)
T PRK11657 121 VYVFADPNCPYCKQFWQQAR 140 (251)
T ss_pred EEEEECCCChhHHHHHHHHH
Confidence 56789999999999876654
Done!