Query 024751
Match_columns 263
No_of_seqs 131 out of 1284
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 13:49:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024751.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024751hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h7u_A Aldo-keto reductase; st 100.0 1E-54 3.5E-59 386.8 24.7 239 13-260 24-262 (335)
2 3ln3_A Dihydrodiol dehydrogena 100.0 1.9E-54 6.4E-59 383.7 25.0 243 12-260 4-257 (324)
3 1zgd_A Chalcone reductase; pol 100.0 1.6E-54 5.4E-59 382.3 23.5 245 12-260 4-249 (312)
4 3o0k_A Aldo/keto reductase; ss 100.0 1.4E-54 4.9E-59 377.2 20.9 216 12-260 24-239 (283)
5 3buv_A 3-OXO-5-beta-steroid 4- 100.0 7.1E-54 2.4E-58 380.3 25.3 245 10-260 3-259 (326)
6 3f7j_A YVGN protein; aldo-keto 100.0 8.2E-54 2.8E-58 371.5 24.0 215 12-260 4-218 (276)
7 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 6.2E-54 2.1E-58 380.2 23.6 243 12-260 3-256 (323)
8 1hw6_A 2,5-diketo-D-gluconic a 100.0 9.8E-54 3.3E-58 371.4 22.8 216 14-260 3-218 (278)
9 4gie_A Prostaglandin F synthas 100.0 1.2E-53 4.1E-58 372.9 23.1 221 9-260 8-228 (290)
10 3b3e_A YVGN protein; aldo-keto 100.0 1.2E-53 3.9E-58 375.7 22.7 216 11-260 37-252 (310)
11 1s1p_A Aldo-keto reductase fam 100.0 3E-53 1E-57 376.9 24.7 241 14-260 5-256 (331)
12 3o3r_A Aldo-keto reductase fam 100.0 4.7E-53 1.6E-57 373.5 25.6 239 14-260 2-249 (316)
13 3krb_A Aldose reductase; ssgci 100.0 2.4E-53 8.3E-58 377.9 23.7 241 14-260 12-266 (334)
14 1mi3_A Xylose reductase, XR; a 100.0 2.1E-53 7.2E-58 376.7 23.2 241 12-260 3-260 (322)
15 2wzm_A Aldo-keto reductase; ox 100.0 1.2E-53 4.2E-58 371.4 21.2 215 13-260 10-224 (283)
16 1vbj_A Prostaglandin F synthas 100.0 2.4E-53 8.1E-58 369.3 22.5 214 13-260 8-221 (281)
17 3h7r_A Aldo-keto reductase; st 100.0 1.2E-53 4.1E-58 379.2 21.0 237 11-260 22-258 (331)
18 1qwk_A Aldose reductase, aldo- 100.0 2.3E-53 7.7E-58 375.7 22.5 232 14-260 5-249 (317)
19 3up8_A Putative 2,5-diketo-D-g 100.0 1.7E-53 5.9E-58 372.7 21.2 217 9-260 19-235 (298)
20 4f40_A Prostaglandin F2-alpha 100.0 3.2E-53 1.1E-57 369.9 22.0 221 14-260 10-230 (288)
21 1us0_A Aldose reductase; oxido 100.0 1.3E-52 4.4E-57 370.7 25.6 238 15-260 3-249 (316)
22 1mzr_A 2,5-diketo-D-gluconate 100.0 1.5E-52 5.1E-57 366.5 23.2 215 13-260 24-238 (296)
23 1vp5_A 2,5-diketo-D-gluconic a 100.0 7.8E-52 2.7E-56 362.2 22.7 211 23-260 21-231 (298)
24 4gac_A Alcohol dehydrogenase [ 100.0 9.8E-52 3.3E-56 366.2 22.8 241 13-260 1-248 (324)
25 2bgs_A Aldose reductase; holoe 100.0 1.4E-51 4.9E-56 367.2 23.8 231 15-260 38-269 (344)
26 3b3d_A YTBE protein, putative 100.0 1.8E-51 6.2E-56 362.8 21.9 218 13-260 39-256 (314)
27 1pz1_A GSP69, general stress p 100.0 1.6E-50 5.5E-55 359.7 22.2 219 14-260 1-264 (333)
28 1pyf_A IOLS protein; beta-alph 100.0 5.7E-51 1.9E-55 359.6 18.8 218 14-260 1-263 (312)
29 3eau_A Voltage-gated potassium 100.0 2.6E-50 8.9E-55 357.6 22.1 223 13-260 2-273 (327)
30 1ur3_M Hypothetical oxidoreduc 100.0 1.4E-50 4.8E-55 357.9 20.3 222 14-260 23-267 (319)
31 3n2t_A Putative oxidoreductase 100.0 4.4E-50 1.5E-54 358.8 22.9 217 14-260 19-284 (348)
32 3lut_A Voltage-gated potassium 100.0 3.6E-50 1.2E-54 361.8 22.1 222 13-260 37-307 (367)
33 3n6q_A YGHZ aldo-keto reductas 100.0 1.8E-49 6.1E-54 354.8 25.6 224 13-260 12-285 (346)
34 3erp_A Putative oxidoreductase 100.0 8.5E-50 2.9E-54 357.6 23.3 224 13-260 33-302 (353)
35 3v0s_A Perakine reductase; AKR 100.0 1.6E-50 5.6E-55 360.2 16.5 218 14-260 1-263 (337)
36 1lqa_A TAS protein; TIM barrel 100.0 1.8E-49 6.2E-54 354.7 21.4 237 14-260 1-292 (346)
37 4exb_A Putative uncharacterize 100.0 2.2E-49 7.6E-54 346.1 18.4 192 13-234 29-244 (292)
38 1ynp_A Oxidoreductase, AKR11C1 100.0 2.7E-49 9.1E-54 349.5 18.5 217 12-260 19-260 (317)
39 2bp1_A Aflatoxin B1 aldehyde r 100.0 8.8E-49 3E-53 351.8 16.9 220 18-260 28-296 (360)
40 1gve_A Aflatoxin B1 aldehyde r 100.0 3.2E-48 1.1E-52 344.1 17.1 211 27-260 4-263 (327)
41 3cf4_A Acetyl-COA decarboxylas 97.5 3.4E-05 1.2E-09 75.1 2.1 100 111-233 231-351 (807)
42 3gd6_A Muconate cycloisomerase 90.4 8.4 0.00029 33.9 14.5 153 40-228 141-299 (391)
43 3q45_A Mandelate racemase/muco 85.2 18 0.00062 31.4 13.5 153 40-229 139-297 (368)
44 3mwc_A Mandelate racemase/muco 85.1 19 0.00065 31.7 13.5 149 42-228 164-316 (400)
45 1mdl_A Mandelate racemase; iso 84.7 19 0.00064 31.1 15.0 148 41-225 144-298 (359)
46 2og9_A Mandelate racemase/muco 84.4 20 0.0007 31.3 13.4 149 41-226 162-317 (393)
47 1r0m_A N-acylamino acid racema 84.3 20 0.00068 31.1 13.7 148 41-227 148-299 (375)
48 2p8b_A Mandelate racemase/muco 84.0 12 0.0004 32.5 11.5 151 41-228 141-298 (369)
49 3qtp_A Enolase 1; glycolysis, 83.5 25 0.00085 31.6 16.2 97 102-226 279-382 (441)
50 2qq6_A Mandelate racemase/muco 81.8 27 0.00091 30.8 13.7 150 41-227 149-321 (410)
51 2pgw_A Muconate cycloisomerase 81.3 23 0.0008 30.8 12.4 151 41-228 147-302 (384)
52 2pp0_A L-talarate/galactarate 80.9 28 0.00097 30.5 13.4 149 41-226 175-330 (398)
53 2zc8_A N-acylamino acid racema 80.6 19 0.00066 31.1 11.6 147 41-227 141-292 (369)
54 2oz8_A MLL7089 protein; struct 80.4 29 0.00099 30.3 15.8 151 41-224 145-296 (389)
55 2hxt_A L-fuconate dehydratase; 80.1 32 0.0011 30.6 14.7 147 40-224 197-351 (441)
56 2rdx_A Mandelate racemase/muco 79.8 30 0.001 30.1 15.4 150 41-228 145-298 (379)
57 2o56_A Putative mandelate race 79.2 32 0.0011 30.1 16.5 150 41-227 152-326 (407)
58 4djd_D C/Fe-SP, corrinoid/iron 78.8 12 0.0004 32.2 9.2 119 112-260 87-212 (323)
59 2ovl_A Putative racemase; stru 78.7 32 0.0011 29.8 16.7 149 41-226 146-301 (371)
60 3rr1_A GALD, putative D-galact 78.4 35 0.0012 30.1 15.6 150 40-226 124-288 (405)
61 1tkk_A Similar to chloromucona 78.3 32 0.0011 29.6 12.8 153 41-228 140-299 (366)
62 3eez_A Putative mandelate race 78.0 20 0.00067 31.3 10.8 152 40-229 144-299 (378)
63 2gl5_A Putative dehydratase pr 77.4 37 0.0013 29.8 16.2 150 41-227 150-329 (410)
64 1nu5_A Chloromuconate cycloiso 77.1 35 0.0012 29.4 14.6 152 41-229 142-301 (370)
65 4a35_A Mitochondrial enolase s 76.6 42 0.0014 30.0 14.6 148 40-224 200-356 (441)
66 2hzg_A Mandelate racemase/muco 76.0 40 0.0014 29.5 13.4 151 40-224 144-304 (401)
67 2ps2_A Putative mandelate race 75.9 22 0.00074 30.8 10.4 151 41-229 146-301 (371)
68 2qde_A Mandelate racemase/muco 75.6 37 0.0013 29.7 11.9 150 41-228 145-301 (397)
69 3fv9_G Mandelate racemase/muco 75.3 28 0.00095 30.5 11.0 154 40-229 144-305 (386)
70 2nql_A AGR_PAT_674P, isomerase 74.3 43 0.0015 29.1 13.4 152 41-229 164-320 (388)
71 3i6e_A Muconate cycloisomerase 73.2 47 0.0016 29.0 14.0 151 41-229 148-305 (385)
72 3jva_A Dipeptide epimerase; en 72.6 46 0.0016 28.6 15.4 150 41-227 139-294 (354)
73 3stp_A Galactonate dehydratase 72.2 38 0.0013 30.0 11.1 149 40-225 178-339 (412)
74 2qdd_A Mandelate racemase/muco 71.7 49 0.0017 28.6 12.9 150 41-228 145-298 (378)
75 2h9a_B CO dehydrogenase/acetyl 71.7 29 0.001 29.5 9.8 113 117-260 85-205 (310)
76 2qgy_A Enolase from the enviro 71.7 51 0.0017 28.7 17.2 150 40-226 148-304 (391)
77 3bjs_A Mandelate racemase/muco 71.4 40 0.0014 29.9 11.2 148 40-224 183-338 (428)
78 2ox4_A Putative mandelate race 70.8 53 0.0018 28.6 15.0 150 41-227 146-320 (403)
79 1tzz_A Hypothetical protein L1 69.3 57 0.0019 28.4 12.7 147 41-224 165-325 (392)
80 3i4k_A Muconate lactonizing en 68.9 58 0.002 28.3 16.8 152 41-229 148-307 (383)
81 3ozy_A Putative mandelate race 68.6 60 0.002 28.3 15.0 149 40-225 150-305 (389)
82 3ro6_B Putative chloromuconate 67.9 34 0.0012 29.5 9.7 152 41-229 140-298 (356)
83 2poz_A Putative dehydratase; o 67.7 61 0.0021 28.1 15.7 151 40-227 136-310 (392)
84 3my9_A Muconate cycloisomerase 67.4 62 0.0021 28.0 11.8 151 41-228 146-303 (377)
85 1sjd_A N-acylamino acid racema 67.2 60 0.0021 27.9 14.9 150 41-228 141-294 (368)
86 3r0u_A Enzyme of enolase super 67.1 63 0.0022 28.1 15.5 154 41-229 142-301 (379)
87 3qy7_A Tyrosine-protein phosph 66.6 18 0.00063 29.8 7.4 162 40-229 17-197 (262)
88 1ydn_A Hydroxymethylglutaryl-C 66.4 12 0.00041 31.4 6.3 100 106-224 26-139 (295)
89 4dye_A Isomerase; enolase fami 66.4 49 0.0017 29.1 10.5 146 42-227 169-321 (398)
90 2yci_X 5-methyltetrahydrofolat 66.2 56 0.0019 27.1 11.7 131 104-260 33-167 (271)
91 3rcy_A Mandelate racemase/muco 65.8 73 0.0025 28.3 12.1 150 40-226 145-313 (433)
92 3qld_A Mandelate racemase/muco 65.6 69 0.0024 27.9 13.0 149 41-228 149-301 (388)
93 4e8g_A Enolase, mandelate race 64.5 73 0.0025 27.8 12.1 151 40-229 163-320 (391)
94 3pdi_B Nitrogenase MOFE cofact 64.1 36 0.0012 30.5 9.4 165 65-259 73-292 (458)
95 1rvk_A Isomerase/lactonizing e 63.7 72 0.0025 27.5 14.3 148 40-224 148-309 (382)
96 3sjn_A Mandelate racemase/muco 62.9 69 0.0024 27.7 10.8 148 42-226 147-304 (374)
97 4hnl_A Mandelate racemase/muco 62.9 36 0.0012 30.1 9.0 163 26-228 141-333 (421)
98 4h1z_A Enolase Q92ZS5; dehydra 62.7 80 0.0027 27.7 13.4 153 40-229 187-344 (412)
99 3ddm_A Putative mandelate race 62.1 42 0.0014 29.4 9.3 148 42-225 156-309 (392)
100 2q5c_A NTRC family transcripti 61.9 20 0.0007 28.1 6.5 80 154-255 80-162 (196)
101 2r14_A Morphinone reductase; H 60.9 64 0.0022 28.1 10.2 36 159-194 289-324 (377)
102 1nvm_A HOA, 4-hydroxy-2-oxoval 60.6 26 0.00089 30.1 7.5 109 101-224 26-139 (345)
103 3tj4_A Mandelate racemase; eno 59.5 86 0.003 27.0 15.8 149 40-225 150-306 (372)
104 4hpn_A Putative uncharacterize 59.5 86 0.0029 27.0 12.3 146 43-225 146-297 (378)
105 2pju_A Propionate catabolism o 59.2 25 0.00086 28.4 6.7 67 154-223 92-159 (225)
106 3r4e_A Mandelate racemase/muco 58.6 96 0.0033 27.3 11.5 151 40-227 142-331 (418)
107 4as2_A Phosphorylcholine phosp 58.6 5.2 0.00018 34.5 2.6 42 207-261 148-193 (327)
108 3tji_A Mandelate racemase/muco 57.5 84 0.0029 27.8 10.5 151 40-227 153-333 (422)
109 4e5t_A Mandelate racemase / mu 57.1 1E+02 0.0034 27.0 14.6 150 40-226 150-318 (404)
110 4dwd_A Mandelate racemase/muco 56.0 1E+02 0.0035 26.8 13.4 149 40-226 138-300 (393)
111 3v7e_A Ribosome-associated pro 55.9 6.5 0.00022 26.4 2.2 58 161-225 3-60 (82)
112 3t6c_A RSPA, putative MAND fam 54.1 1.2E+02 0.0041 27.0 12.5 67 158-226 280-350 (440)
113 3dg3_A Muconate cycloisomerase 53.6 1.1E+02 0.0037 26.3 13.8 152 41-229 139-297 (367)
114 3l8a_A METC, putative aminotra 53.4 1.1E+02 0.0037 26.3 13.1 155 31-228 66-237 (421)
115 2akz_A Gamma enolase, neural; 53.0 1.1E+02 0.0038 27.2 10.5 97 103-227 271-373 (439)
116 2ftp_A Hydroxymethylglutaryl-C 53.0 36 0.0012 28.6 7.0 99 106-223 30-142 (302)
117 3p3b_A Mandelate racemase/muco 52.0 78 0.0027 27.5 9.3 144 43-224 150-311 (392)
118 2gdq_A YITF; mandelate racemas 51.7 1.2E+02 0.004 26.2 13.0 146 43-224 141-293 (382)
119 1eye_A DHPS 1, dihydropteroate 51.1 1.1E+02 0.0037 25.5 12.8 135 104-260 28-175 (280)
120 3toy_A Mandelate racemase/muco 50.8 1.2E+02 0.0042 26.2 13.0 151 40-227 166-324 (383)
121 3mkc_A Racemase; metabolic pro 49.8 1.3E+02 0.0044 26.2 12.9 146 44-226 160-316 (394)
122 1kko_A 3-methylaspartate ammon 49.8 84 0.0029 27.6 9.1 71 155-227 282-361 (413)
123 1wuf_A Hypothetical protein LI 49.0 1.3E+02 0.0045 26.0 13.8 148 41-229 161-314 (393)
124 4h3d_A 3-dehydroquinate dehydr 48.6 1.1E+02 0.0038 25.0 18.1 131 10-174 6-144 (258)
125 3s5s_A Mandelate racemase/muco 48.2 1.4E+02 0.0047 26.0 14.1 154 40-229 143-302 (389)
126 4e4u_A Mandalate racemase/muco 47.7 1.4E+02 0.0049 26.1 15.0 150 40-226 143-311 (412)
127 4h83_A Mandelate racemase/muco 47.4 1.4E+02 0.0048 25.9 11.1 161 27-224 151-318 (388)
128 4h62_V Mediator of RNA polymer 47.4 9 0.00031 19.9 1.4 18 173-190 4-21 (31)
129 1wue_A Mandelate racemase/muco 46.9 1.4E+02 0.0048 25.7 11.2 148 41-229 161-314 (386)
130 1wa3_A 2-keto-3-deoxy-6-phosph 46.5 43 0.0015 26.0 6.1 60 155-223 49-109 (205)
131 2zad_A Muconate cycloisomerase 46.2 1.4E+02 0.0046 25.3 15.9 153 41-229 139-296 (345)
132 3u9i_A Mandelate racemase/muco 46.0 1.5E+02 0.0051 25.8 12.5 153 41-229 165-331 (393)
133 1x87_A Urocanase protein; stru 45.6 51 0.0018 30.0 6.8 101 68-202 144-263 (551)
134 3j21_Z 50S ribosomal protein L 45.2 53 0.0018 22.5 5.7 60 158-224 4-63 (99)
135 3go2_A Putative L-alanine-DL-g 44.9 1.4E+02 0.0049 26.1 9.9 66 158-225 251-319 (409)
136 1aj0_A DHPS, dihydropteroate s 44.8 1.4E+02 0.0046 24.9 12.1 133 106-260 36-183 (282)
137 1vp8_A Hypothetical protein AF 44.7 1.1E+02 0.0039 24.1 8.3 94 154-260 28-128 (201)
138 2ozt_A TLR1174 protein; struct 44.7 1.4E+02 0.0049 25.2 15.5 155 41-229 116-276 (332)
139 1ydo_A HMG-COA lyase; TIM-barr 44.3 52 0.0018 27.8 6.6 99 106-223 28-140 (307)
140 3mqt_A Mandelate racemase/muco 44.0 1.6E+02 0.0055 25.5 12.6 146 44-226 155-311 (394)
141 2lbw_A H/ACA ribonucleoprotein 44.0 71 0.0024 22.9 6.4 64 155-224 6-69 (121)
142 1uwk_A Urocanate hydratase; hy 43.7 52 0.0018 30.0 6.6 122 47-202 116-268 (557)
143 1vpq_A Hypothetical protein TM 43.2 91 0.0031 25.8 7.8 99 26-133 11-130 (273)
144 3ugv_A Enolase; enzyme functio 43.2 1.6E+02 0.0056 25.5 10.2 151 40-227 170-330 (390)
145 2xvc_A ESCRT-III, SSO0910; cel 43.2 20 0.00068 22.4 2.7 19 154-172 39-57 (59)
146 2fkn_A Urocanate hydratase; ro 42.4 51 0.0018 30.0 6.3 122 47-202 112-264 (552)
147 1mio_B Nitrogenase molybdenum 42.0 90 0.0031 27.8 8.2 177 54-258 61-290 (458)
148 3u7q_B Nitrogenase molybdenum- 41.1 57 0.002 29.8 6.8 112 66-196 125-253 (523)
149 3ik4_A Mandelate racemase/muco 39.7 1.8E+02 0.0061 24.9 14.9 154 40-229 142-301 (365)
150 3iz5_f 60S ribosomal protein L 39.3 40 0.0014 24.0 4.3 64 154-224 11-74 (112)
151 3sbf_A Mandelate racemase / mu 39.3 1.9E+02 0.0066 25.1 13.8 151 40-227 132-312 (401)
152 1vq8_F 50S ribosomal protein L 39.2 86 0.003 22.3 6.3 63 155-223 15-77 (120)
153 2ale_A SNU13, NHP2/L7AE family 39.0 75 0.0026 23.3 6.0 64 155-224 18-81 (134)
154 1t57_A Conserved protein MTH16 38.8 1.1E+02 0.0039 24.2 7.1 94 154-260 36-135 (206)
155 1olt_A Oxygen-independent copr 38.4 1.3E+02 0.0043 26.8 8.6 122 47-180 154-292 (457)
156 4ggi_A UDP-2,3-diacylglucosami 38.3 28 0.00094 29.2 3.9 40 208-255 234-273 (283)
157 3o85_A Ribosomal protein L7AE; 38.1 86 0.0029 22.5 6.1 64 154-223 16-79 (122)
158 2xzm_U Ribosomal protein L7AE 37.7 1.1E+02 0.0039 22.0 7.5 65 155-225 6-74 (126)
159 3cpq_A 50S ribosomal protein L 37.5 76 0.0026 22.2 5.6 63 155-224 7-69 (110)
160 3p6l_A Sugar phosphate isomera 37.5 1.5E+02 0.0052 23.4 8.7 86 158-255 25-130 (262)
161 3v7q_A Probable ribosomal prot 37.2 72 0.0025 21.9 5.4 62 156-224 6-67 (101)
162 3ff4_A Uncharacterized protein 35.3 1.1E+02 0.0036 21.9 6.2 17 207-223 94-110 (122)
163 3ekg_A Mandelate racemase/muco 34.8 1.7E+02 0.0057 25.7 8.6 66 158-225 250-321 (404)
164 3rfa_A Ribosomal RNA large sub 34.3 2.4E+02 0.0082 24.8 10.4 170 40-229 143-349 (404)
165 2chr_A Chloromuconate cycloiso 34.2 2.2E+02 0.0074 24.2 13.2 153 40-229 142-301 (370)
166 3ks6_A Glycerophosphoryl diest 33.6 1.1E+02 0.0037 24.7 6.8 66 161-226 123-212 (250)
167 2cw6_A Hydroxymethylglutaryl-C 33.2 75 0.0026 26.5 5.8 103 102-224 24-140 (298)
168 2fc3_A 50S ribosomal protein L 33.1 85 0.0029 22.5 5.4 63 155-223 14-76 (124)
169 1tx2_A DHPS, dihydropteroate s 32.9 2.2E+02 0.0074 23.9 10.9 94 157-260 103-202 (297)
170 3dzz_A Putative pyridoxal 5'-p 32.1 2.2E+02 0.0075 23.6 13.4 51 178-228 147-203 (391)
171 3no3_A Glycerophosphodiester p 32.1 59 0.002 26.1 4.9 66 161-226 121-204 (238)
172 3qp1_A CVIR transcriptional re 32.0 1.6E+02 0.0056 22.2 7.5 91 101-226 29-141 (182)
173 3l5l_A Xenobiotic reductase A; 31.9 2.4E+02 0.0083 24.1 10.0 33 161-193 287-320 (363)
174 2ptz_A Enolase; lyase, glycoly 31.7 2.7E+02 0.0092 24.5 10.2 94 105-226 275-376 (432)
175 3gyb_A Transcriptional regulat 31.6 1.9E+02 0.0065 22.8 9.4 101 42-178 103-214 (280)
176 4gxt_A A conserved functionall 31.3 40 0.0014 29.5 3.9 41 208-261 227-271 (385)
177 3k13_A 5-methyltetrahydrofolat 31.1 1.9E+02 0.0066 24.2 8.0 86 172-260 86-176 (300)
178 3tqp_A Enolase; energy metabol 30.7 2.8E+02 0.0096 24.5 12.5 122 73-226 225-367 (428)
179 1rlg_A 50S ribosomal protein L 30.0 90 0.0031 22.1 5.0 63 155-223 13-75 (119)
180 1kcz_A Beta-methylaspartase; b 29.7 1.3E+02 0.0046 26.2 7.1 72 155-228 282-363 (413)
181 4djd_C C/Fe-SP, corrinoid/iron 29.6 2.5E+02 0.0086 25.1 8.8 117 104-254 104-226 (446)
182 3p7x_A Probable thiol peroxida 29.2 1.1E+02 0.0039 22.3 5.8 38 155-192 63-100 (166)
183 3mz2_A Glycerophosphoryl diest 29.1 1.7E+02 0.0058 24.2 7.4 67 161-227 148-237 (292)
184 1vpy_A Protein (hypothetical p 29.0 2.5E+02 0.0085 23.3 11.6 98 26-133 11-124 (289)
185 3fcp_A L-Ala-D/L-Glu epimerase 28.4 2.8E+02 0.0097 23.8 13.0 152 41-229 147-306 (381)
186 1v77_A PH1877P, hypothetical p 28.0 2.1E+02 0.0074 22.3 8.3 88 162-260 90-196 (212)
187 3v5c_A Mandelate racemase/muco 28.0 63 0.0021 28.3 4.6 56 168-226 256-313 (392)
188 1w41_A 50S ribosomal protein L 27.8 1E+02 0.0036 21.0 4.9 60 158-224 5-64 (101)
189 2ksn_A Ubiquitin domain-contai 27.6 20 0.00068 26.5 1.0 22 58-79 44-65 (137)
190 3dgb_A Muconate cycloisomerase 27.5 2.9E+02 0.01 23.7 12.7 152 41-229 148-307 (382)
191 3ri6_A O-acetylhomoserine sulf 27.5 3.1E+02 0.011 23.9 9.5 97 109-229 108-208 (430)
192 2xdq_A Light-independent proto 27.4 1.7E+02 0.0057 25.9 7.4 59 66-133 79-139 (460)
193 3p6l_A Sugar phosphate isomera 27.3 1.2E+02 0.0043 23.9 6.1 33 30-64 11-43 (262)
194 3on1_A BH2414 protein; structu 27.3 57 0.002 22.4 3.4 61 156-223 5-65 (101)
195 1h5y_A HISF; histidine biosynt 27.1 2.2E+02 0.0076 22.1 9.9 159 27-221 77-251 (253)
196 2al1_A Enolase 1, 2-phospho-D- 26.9 3.3E+02 0.011 24.0 12.2 97 103-227 274-376 (436)
197 3ec1_A YQEH GTPase; atnos1, at 26.7 3E+02 0.01 23.5 10.3 122 41-189 57-185 (369)
198 2aif_A Ribosomal protein L7A; 26.7 90 0.0031 22.8 4.6 64 155-224 27-90 (135)
199 3otr_A Enolase; structural gen 26.3 3.5E+02 0.012 24.2 11.6 97 102-224 281-382 (452)
200 3hgj_A Chromate reductase; TIM 26.1 3E+02 0.01 23.3 11.3 35 159-193 278-313 (349)
201 3l12_A Putative glycerophospho 26.1 2.8E+02 0.0096 23.0 8.6 35 156-190 165-200 (313)
202 3ewb_X 2-isopropylmalate synth 25.8 2.5E+02 0.0086 23.3 7.8 97 107-226 28-142 (293)
203 2ph5_A Homospermidine synthase 25.8 36 0.0012 30.9 2.6 23 42-64 93-115 (480)
204 3dxi_A Putative aldolase; TIM 25.8 2.6E+02 0.0088 23.6 7.9 105 106-224 24-133 (320)
205 2uyg_A 3-dehydroquinate dehydr 25.0 95 0.0033 23.3 4.4 81 101-207 23-106 (149)
206 4a18_G RPL30; ribosome, eukary 25.0 1.2E+02 0.0043 20.8 4.9 63 155-224 8-70 (104)
207 3uj2_A Enolase 1; enzyme funct 24.6 3.7E+02 0.013 23.9 11.0 96 103-226 290-393 (449)
208 2xdq_B Light-independent proto 24.4 3.9E+02 0.013 24.0 10.3 157 67-254 71-268 (511)
209 2nyg_A YOKD protein; PFAM02522 24.4 1.1E+02 0.0037 25.5 5.1 51 108-170 15-66 (273)
210 1qwg_A PSL synthase;, (2R)-pho 24.4 2.1E+02 0.0072 23.4 6.8 77 44-131 86-170 (251)
211 3eeg_A 2-isopropylmalate synth 24.2 3.2E+02 0.011 23.0 10.1 98 108-228 30-145 (325)
212 3vcn_A Mannonate dehydratase; 24.2 3.6E+02 0.012 23.6 12.5 151 40-227 149-338 (425)
213 1vyr_A Pentaerythritol tetrani 24.1 3.4E+02 0.012 23.2 13.8 36 159-194 284-319 (364)
214 2ab1_A Hypothetical protein; H 24.1 1.8E+02 0.0062 20.8 5.7 49 178-227 49-98 (122)
215 3i6i_A Putative leucoanthocyan 23.9 2.6E+02 0.009 23.0 7.8 71 158-229 51-122 (346)
216 2fg1_A Conserved hypothetical 23.9 47 0.0016 24.9 2.7 32 26-59 121-153 (158)
217 3a2b_A Serine palmitoyltransfe 23.8 3.2E+02 0.011 22.8 9.1 147 41-229 58-214 (398)
218 3va8_A Probable dehydratase; e 23.8 3.8E+02 0.013 23.7 10.4 148 40-228 190-345 (445)
219 1chr_A Chloromuconate cycloiso 23.7 3.4E+02 0.012 23.1 15.3 151 42-229 143-301 (370)
220 3ngj_A Deoxyribose-phosphate a 23.5 2.9E+02 0.01 22.3 8.1 75 40-127 40-116 (239)
221 3b46_A Aminotransferase BNA3; 23.5 3.5E+02 0.012 23.2 10.2 21 208-228 224-244 (447)
222 3hcw_A Maltose operon transcri 23.3 2.8E+02 0.0097 22.1 9.9 103 42-179 116-228 (295)
223 3guv_A Site-specific recombina 23.3 87 0.003 23.4 4.1 42 111-168 62-105 (167)
224 3l23_A Sugar phosphate isomera 23.3 3E+02 0.01 22.4 9.1 50 30-79 14-71 (303)
225 3szt_A QCSR, quorum-sensing co 23.3 2.7E+02 0.0094 21.9 7.6 92 102-227 16-118 (237)
226 3vnd_A TSA, tryptophan synthas 23.3 3E+02 0.01 22.5 7.8 87 152-252 77-171 (267)
227 2eee_A Uncharacterized protein 22.8 59 0.002 24.1 3.0 26 26-53 112-137 (149)
228 1qgu_B Protein (nitrogenase mo 22.8 1.5E+02 0.005 27.0 6.2 166 65-258 122-338 (519)
229 3u5e_c L32, RP73, YL38, 60S ri 22.8 95 0.0033 21.5 3.9 63 155-224 8-70 (105)
230 3qhx_A Cystathionine gamma-syn 22.7 3.5E+02 0.012 22.9 8.5 73 156-229 117-192 (392)
231 2gou_A Oxidoreductase, FMN-bin 22.7 3.6E+02 0.012 23.0 12.9 35 159-193 283-317 (365)
232 4had_A Probable oxidoreductase 22.5 3.3E+02 0.011 22.6 9.6 84 161-255 40-139 (350)
233 3aek_B Light-independent proto 22.4 1.7E+02 0.0058 26.6 6.5 156 68-256 69-257 (525)
234 2p3z_A L-rhamnonate dehydratas 22.2 1.9E+02 0.0064 25.4 6.6 65 158-225 262-332 (415)
235 3gbx_A Serine hydroxymethyltra 22.2 1.5E+02 0.0051 25.1 5.9 49 178-226 156-205 (420)
236 3jvd_A Transcriptional regulat 21.9 2.7E+02 0.0093 22.8 7.4 99 42-178 159-269 (333)
237 1icp_A OPR1, 12-oxophytodienoa 21.4 3.9E+02 0.013 22.9 9.2 34 161-194 293-326 (376)
238 3qn3_A Enolase; structural gen 21.4 4.2E+02 0.014 23.3 13.2 123 71-227 223-365 (417)
239 3ijw_A Aminoglycoside N3-acety 21.4 1.4E+02 0.0048 24.7 5.2 53 107-171 16-69 (268)
240 2lju_A Putative oxidoreductase 21.3 69 0.0024 22.7 2.8 22 207-228 69-90 (108)
241 3ecd_A Serine hydroxymethyltra 21.2 1.2E+02 0.0042 25.6 5.2 49 178-226 159-208 (425)
242 3fvs_A Kynurenine--oxoglutarat 21.2 3.7E+02 0.013 22.6 11.9 50 178-228 162-217 (422)
243 3vdg_A Probable glucarate dehy 20.8 4.4E+02 0.015 23.3 9.9 148 40-228 192-347 (445)
244 3dbi_A Sugar-binding transcrip 20.6 3.5E+02 0.012 22.0 9.7 14 156-169 253-266 (338)
245 3ktc_A Xylose isomerase; putat 20.5 85 0.0029 26.3 3.9 54 26-79 5-73 (333)
246 1ub3_A Aldolase protein; schif 20.5 3.2E+02 0.011 21.6 7.6 151 40-223 16-181 (220)
247 3vnd_A TSA, tryptophan synthas 20.5 3.5E+02 0.012 22.1 9.1 52 194-255 97-150 (267)
248 3v3w_A Starvation sensing prot 20.5 4.3E+02 0.015 23.1 14.3 67 159-227 267-337 (424)
249 1ps9_A 2,4-dienoyl-COA reducta 20.4 5.1E+02 0.017 23.9 13.1 77 44-125 142-247 (671)
250 4hb7_A Dihydropteroate synthas 20.4 3.7E+02 0.013 22.2 10.5 66 154-225 67-132 (270)
251 2pa6_A Enolase; glycolysis, ly 20.1 4.3E+02 0.015 23.0 10.5 96 103-226 268-369 (427)
252 3noy_A 4-hydroxy-3-methylbut-2 20.1 4.3E+02 0.015 22.9 9.3 69 155-223 70-138 (366)
No 1
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1e-54 Score=386.78 Aligned_cols=239 Identities=41% Similarity=0.755 Sum_probs=211.7
Q ss_pred CcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEE
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELF 92 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~ 92 (263)
.|++++|++| ++||+||||||. .+.+++.++++.|++.|||+||||+.||+|+.+|++|++.++++.+ +|+++|
T Consensus 24 ~m~~~~L~tg---~~v~~lglGt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~-~R~~v~ 97 (335)
T 3h7u_A 24 AITFFKLNTG---AKFPSVGLGTWQ--ASPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVV-KREDLF 97 (335)
T ss_dssp CCCEEECTTS---CEEESBCEECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSC-CGGGCE
T ss_pred CCceEEcCCC---CEecceeEeCCc--CCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHHHHhcCCC-CcceeE
Confidence 4899999866 999999999998 5788999999999999999999999999999999999987776754 799999
Q ss_pred EeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE
Q 024751 93 ITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS 172 (263)
Q Consensus 93 I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 172 (263)
|+||+|....+++.+++++++||++||+||||+|++|||+...++. ..| ...........++|++|++|+++||||+
T Consensus 98 I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~--~~~-~~~~~~~~~~~e~~~aL~~l~~~Gkir~ 174 (335)
T 3h7u_A 98 ITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGS--VGI-KPENLLPVDIPSTWKAMEALYDSGKARA 174 (335)
T ss_dssp EEEEECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSC--SSC-CGGGEECCCHHHHHHHHHHHHHTTSBSS
T ss_pred EEeeeCCCCCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCcccccc--ccc-cccccccCCHHHHHHHHHHHHHcCCccE
Confidence 9999998888899999999999999999999999999996543321 111 1111223458999999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHh
Q 024751 173 IGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQ 252 (263)
Q Consensus 173 iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~ 252 (263)
||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||+++|..++....+.++.+.+||++|
T Consensus 175 iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~sPL~~g~~~~~~~~~~~~~~l~~iA~~~ 254 (335)
T 3h7u_A 175 IGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLKNPILNMVAEKL 254 (335)
T ss_dssp EEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCCTTCTTSCCCGGGCHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHhCCCCeEEEecccccccCCHHHHHHHHHCCCEEEEeccCcCCCCCCCCccccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999745566666778889999999999
Q ss_pred CCCchhhc
Q 024751 253 QGETEREL 260 (263)
Q Consensus 253 ~~t~~~~~ 260 (263)
|+|++|++
T Consensus 255 g~t~aqva 262 (335)
T 3h7u_A 255 GKSPAQVA 262 (335)
T ss_dssp TCCHHHHH
T ss_pred CcCHHHHH
Confidence 99999985
No 2
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=1.9e-54 Score=383.75 Aligned_cols=243 Identities=35% Similarity=0.619 Sum_probs=209.1
Q ss_pred CCcCeEEcCCCCCccccCeeceeccccC-CChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCcc
Q 024751 12 INVPEVKLSSASGHRKMPVIGLGSAVDN-IDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREE 90 (263)
Q Consensus 12 ~~~~~~~l~~g~~g~~v~~iglG~~~~~-~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~ 90 (263)
..|++++|++| ++||+||||||.++ .+.+++.++++.|++.|||+||||+.||+|+.+|++|++.++++.+ +|++
T Consensus 4 ~~m~~~~L~tg---~~v~~lglGt~~~~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~-~R~~ 79 (324)
T 3ln3_A 4 SXQHCVXLNDG---HLIPALGFGTYXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSXIXAGVV-XRED 79 (324)
T ss_dssp --CCEEECTTS---CEEESSEEECCCCTTSCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGG
T ss_pred cCCceEECCCC---CCcCCeeecCCcccCCChHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHhhccCCc-ccce
Confidence 35899999766 99999999999976 6788999999999999999999999999999999999987777643 8999
Q ss_pred EEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCc---cccccCCHHHHHHHHHHHHHc
Q 024751 91 LFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPE---EDLVSLDYNGVWEAMEECQRH 167 (263)
Q Consensus 91 ~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~l~~~ 167 (263)
+||+||+|....+++.+++++++||++||+||||+|++|||+...++++ ..|... .........++|++|++|+++
T Consensus 80 ~~I~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~al~~l~~~ 158 (324)
T 3ln3_A 80 LFVTTKLWCTCFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDN-DFPVNEQGXSLLDTVDFCDTWERLEECXDA 158 (324)
T ss_dssp CEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSC-SSCBCTTCCBCBCCCCHHHHHHHHHHHHHT
T ss_pred eEEEeeeCCccCCHHHHHHHHHHHHHHhCCCcceEEEEecCcccccccc-ccccccccccccccCCHHHHHHHHHHHHhc
Confidence 9999999988889999999999999999999999999999976543211 111110 011234589999999999999
Q ss_pred CCccEEEecCCCHHHHHHHHHhCCCC--CeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCC-----CCCCCC
Q 024751 168 GLTKSIGVSNFSPKKIETILAFATIP--PTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSW-----GTNQVM 240 (263)
Q Consensus 168 G~ir~iGvs~~~~~~l~~~~~~~~~~--~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~-----~~~~~l 240 (263)
|+||+||||||+.++++++++.+.++ |+++|++||++.++.+++++|+++||++++|+||++ |.+. ..+.++
T Consensus 159 Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-g~~~~~~~~~~~~~~ 237 (324)
T 3ln3_A 159 GLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQRXLLDYCESXDIVLVAYGALGT-QRYXEWVDQNSPVLL 237 (324)
T ss_dssp TSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSCTTSCCGG
T ss_pred CCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccchHHHHHHHHHcCCEEEEecCCCC-CCcccccccCCcchh
Confidence 99999999999999999999988777 999999999999899999999999999999999996 7642 122356
Q ss_pred CcHHHHHHHHHhCCCchhhc
Q 024751 241 NNEALKQIAALQQGETEREL 260 (263)
Q Consensus 241 ~~~~l~~ia~~~~~t~~~~~ 260 (263)
.++.+.+||++||+|++|++
T Consensus 238 ~~~~l~~ia~~~g~t~aqva 257 (324)
T 3ln3_A 238 NDPVLCDVAXXNXRSPALIA 257 (324)
T ss_dssp GCHHHHHHHHHHTSCHHHHH
T ss_pred cCHHHHHHHHhhCCCHHHHH
Confidence 77999999999999999985
No 3
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=1.6e-54 Score=382.25 Aligned_cols=245 Identities=54% Similarity=0.912 Sum_probs=208.9
Q ss_pred CCcCeEE-cCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCcc
Q 024751 12 INVPEVK-LSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREE 90 (263)
Q Consensus 12 ~~~~~~~-l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~ 90 (263)
..|++++ |++ .||++||+|||||+.+..+.+++.++++.|++.|||+||||+.||+|+.+|++|++.+++|.+ +|++
T Consensus 4 ~~m~~~~~l~~-~tg~~v~~lglGt~~~~~~~~~~~~~v~~Al~~G~~~iDTA~~YgsE~~vG~al~~~~~~g~~-~R~~ 81 (312)
T 1zgd_A 4 VEIPTKVLTNT-SSQLKMPVVGMGSAPDFTCKKDTKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLV-TRDD 81 (312)
T ss_dssp -CCCEEECTTS-TTCCEEESBCBCCSCCTTCCSCHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGG
T ss_pred CCCchhhhcCC-CCCCCCCceeEcCcccCCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCC-cchh
Confidence 3478899 875 035999999999944445677899999999999999999999999999999999986666633 7999
Q ss_pred EEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCc
Q 024751 91 LFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLT 170 (263)
Q Consensus 91 ~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i 170 (263)
+||+||+|....+++.+++++++||++||+||||+|++|||+...+. +...|....+.......++|++|++|+++|+|
T Consensus 82 ~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~-~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gki 160 (312)
T 1zgd_A 82 LFVTSKLWVTENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPG-KFSFPIDVADLLPFDVKGVWESMEESLKLGLT 160 (312)
T ss_dssp CEEEEEECGGGCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTT-CCCSSEEGGGEECCCHHHHHHHHHHHHHTTSB
T ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCc-cccccccccccccccHHHHHHHHHHHHHcCCC
Confidence 99999999888889999999999999999999999999999643221 10111000111123478999999999999999
Q ss_pred cEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHH
Q 024751 171 KSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAA 250 (263)
Q Consensus 171 r~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~ 250 (263)
|+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+++.+.++.++.+.+||+
T Consensus 161 r~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~~~~~~~~~~~~~l~~ia~ 239 (312)
T 1zgd_A 161 KAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQKKLREFCNAHGIVLTAFSPVRK-GASRGPNEVMENDMLKEIAD 239 (312)
T ss_dssp SCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TTTTSSCTTTTCHHHHHHHH
T ss_pred CEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCCHHHHHHHHHcCCEEEEecCCCC-CCCCCCccccccHHHHHHHH
Confidence 99999999999999999988889999999999999989999999999999999999995 87776667788899999999
Q ss_pred HhCCCchhhc
Q 024751 251 LQQGETEREL 260 (263)
Q Consensus 251 ~~~~t~~~~~ 260 (263)
+||+|++|++
T Consensus 240 ~~g~s~aqva 249 (312)
T 1zgd_A 240 AHGKSVAQIS 249 (312)
T ss_dssp HHTSCHHHHH
T ss_pred HcCCCHHHHH
Confidence 9999999985
No 4
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=1.4e-54 Score=377.24 Aligned_cols=216 Identities=39% Similarity=0.689 Sum_probs=198.2
Q ss_pred CCcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccE
Q 024751 12 INVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREEL 91 (263)
Q Consensus 12 ~~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~ 91 (263)
.+|++++|++| ++||+||||||++ +.+++.++++.|++.|||+||||+.||+|+.+|++|++. ++ +|+++
T Consensus 24 ~~m~~~~L~~g---~~v~~lglGt~~~--~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~--~R~~~ 93 (283)
T 3o0k_A 24 MTVPTVKLNDG---NHIPQLGYGVWQI--SNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGKAINGS---GI--ARADI 93 (283)
T ss_dssp CCCCEEECTTS---CEEESBCEECCSC--CHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHTS---SS--CGGGC
T ss_pred CCCceEECCCC---CEECCeeEECccC--CHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---CC--CcccE
Confidence 35899999766 9999999999994 688999999999999999999999999999999999965 55 79999
Q ss_pred EEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc
Q 024751 92 FITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK 171 (263)
Q Consensus 92 ~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir 171 (263)
||+||+|....+++.+++++++||++||+||||+|++|||+... ....++|++|++|+++|+||
T Consensus 94 ~i~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~----------------~~~~e~~~al~~l~~~Gkir 157 (283)
T 3o0k_A 94 FLTTKLWNSDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSK----------------DLFMETWRAFIKLKEEGRVK 157 (283)
T ss_dssp EEEEEECGGGCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCH----------------HHHHHHHHHHHHHHHTTSEE
T ss_pred EEEEccCCCCCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCc----------------ccHHHHHHHHHHHHHCCCcc
Confidence 99999998888899999999999999999999999999995421 12689999999999999999
Q ss_pred EEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 024751 172 SIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAL 251 (263)
Q Consensus 172 ~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~ 251 (263)
+||||||+.++++++++...++|+++|++||++.++.+++++|+++||++++|+||++ |.+ +.++.+.++|++
T Consensus 158 ~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l------~~~~~l~~ia~~ 230 (283)
T 3o0k_A 158 SIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQDELRLFHGKHDIATEAWSPLGQ-GKL------LEDPTLKSIAEK 230 (283)
T ss_dssp EEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-C-C------TTCHHHHHHHHH
T ss_pred eEEeccCcHHHHHHHHHhCCCCeEEEEeecCcccCcHHHHHHHHHCCcEEEEecCCCC-Ccc------ccchHHHHHHHH
Confidence 9999999999999999988899999999999999999999999999999999999996 654 567899999999
Q ss_pred hCCCchhhc
Q 024751 252 QQGETEREL 260 (263)
Q Consensus 252 ~~~t~~~~~ 260 (263)
||+|++|++
T Consensus 231 ~g~t~aqva 239 (283)
T 3o0k_A 231 HAKSVAQII 239 (283)
T ss_dssp HTSCHHHHH
T ss_pred hCCCHHHHH
Confidence 999999985
No 5
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=7.1e-54 Score=380.26 Aligned_cols=245 Identities=35% Similarity=0.633 Sum_probs=208.9
Q ss_pred cCCCcCeEEcCCCCCccccCeeceeccccC--CChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCC
Q 024751 10 VSINVPEVKLSSASGHRKMPVIGLGSAVDN--IDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVAS 87 (263)
Q Consensus 10 ~~~~~~~~~l~~g~~g~~v~~iglG~~~~~--~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~ 87 (263)
.+..+++++|++| ++||+||||||.++ .+.+++.++++.|++.|||+||||+.||+|+.+|++|++.+++|.+ +
T Consensus 3 ~~~~~~~~~L~tg---~~v~~lglGt~~~g~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~ 78 (326)
T 3buv_A 3 LSAASHRIPLSDG---NSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKV-R 78 (326)
T ss_dssp CCSSCCEEECTTS---CEEESBCEECCCCGGGCCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-C
T ss_pred ccCCCCeEECCCC---CeeCCeeEcccCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCC-C
Confidence 3445688999665 99999999999976 6788999999999999999999999999999999999987666633 7
Q ss_pred CccEEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCcc-c--cccCCHHHHHHHHHHH
Q 024751 88 REELFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEE-D--LVSLDYNGVWEAMEEC 164 (263)
Q Consensus 88 R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~l 164 (263)
|+++||+||+|....+++.+++++++||++||+||||+|++|||+...++ +...|.... . .......++|++|++|
T Consensus 79 R~~~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~ale~l 157 (326)
T 3buv_A 79 REDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPG-DEIYPRDENGKWLYHKSNLCATWEAMEAC 157 (326)
T ss_dssp GGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCS-SCSSCBCTTCCBCBCCCCHHHHHHHHHHH
T ss_pred hhHeEEEeeeCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCc-cccCccccccccccccccHHHHHHHHHHH
Confidence 99999999999888889999999999999999999999999999754321 111110000 0 0022478999999999
Q ss_pred HHcCCccEEEecCCCHHHHHHHHHhCCCC--CeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCC-----CCC
Q 024751 165 QRHGLTKSIGVSNFSPKKIETILAFATIP--PTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSW-----GTN 237 (263)
Q Consensus 165 ~~~G~ir~iGvs~~~~~~l~~~~~~~~~~--~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~-----~~~ 237 (263)
+++|+||+||||||+.++++++++.+.++ |+++|++||++.++.+++++|+++||++++|+||++ |.++ ..+
T Consensus 158 ~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~ 236 (326)
T 3buv_A 158 KDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGT-SRNPIWVNVSSP 236 (326)
T ss_dssp HHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-CCCTTTSCTTSC
T ss_pred HHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCcHHHHHHHHHcCCEEEEeccccC-CccccccccCCc
Confidence 99999999999999999999999988888 999999999999889999999999999999999996 8764 123
Q ss_pred CCCCcHHHHHHHHHhCCCchhhc
Q 024751 238 QVMNNEALKQIAALQQGETEREL 260 (263)
Q Consensus 238 ~~l~~~~l~~ia~~~~~t~~~~~ 260 (263)
.++.++.+.+||++||+|++|++
T Consensus 237 ~~~~~~~l~~ia~~~g~s~aqva 259 (326)
T 3buv_A 237 PLLKDALLNSLGKRYNKTAAQIV 259 (326)
T ss_dssp CGGGCHHHHHHHHHHTCCHHHHH
T ss_pred cccccHHHHHHHHHhCCCHHHHH
Confidence 45678999999999999999985
No 6
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=8.2e-54 Score=371.49 Aligned_cols=215 Identities=40% Similarity=0.686 Sum_probs=199.2
Q ss_pred CCcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccE
Q 024751 12 INVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREEL 91 (263)
Q Consensus 12 ~~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~ 91 (263)
..|++++|++| ++||+||||||+++ +.+++.++++.|++.|||+||||+.||+|+.+|++|++. ++ +|+++
T Consensus 4 ~~m~~~~L~~g---~~v~~lglGt~~~~-~~~~~~~~l~~Al~~G~~~~DTA~~Yg~E~~lG~al~~~---~~--~R~~~ 74 (276)
T 3f7j_A 4 SLKDTVKLHNG---VEMPWFGLGVFKVE-NGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GV--AREEL 74 (276)
T ss_dssp STTCEEECTTS---CEEESBCEECTTCC-TTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHH---CS--CGGGC
T ss_pred CCcceEECCCC---CEecceeecCCcCC-CHHHHHHHHHHHHHcCCCEEECcCcccCHHHHHHHHhhc---CC--CcccE
Confidence 45789999765 99999999999974 568899999999999999999999999999999999986 65 79999
Q ss_pred EEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc
Q 024751 92 FITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK 171 (263)
Q Consensus 92 ~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir 171 (263)
||+||+|..+.+++.+++++++||++||+||||+|++|||+.. ...++|++|++|+++|+||
T Consensus 75 ~i~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~------------------~~~~~~~~l~~l~~~Gkir 136 (276)
T 3f7j_A 75 FITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD------------------KYKDTWRALEKLYKDGKIR 136 (276)
T ss_dssp EEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS------------------SHHHHHHHHHHHHHTTSEE
T ss_pred EEEEeeCCCCCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCC------------------cHHHHHHHHHHHHHcCCcc
Confidence 9999999888889999999999999999999999999999532 1689999999999999999
Q ss_pred EEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 024751 172 SIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAL 251 (263)
Q Consensus 172 ~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~ 251 (263)
+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+ +.++.+.++|++
T Consensus 137 ~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l------~~~~~l~~ia~~ 209 (276)
T 3f7j_A 137 AIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQL------LDNEVLTQIAEK 209 (276)
T ss_dssp EEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTT------TTCHHHHHHHHH
T ss_pred EEEeccCCHHHHHHHHHhcCCCceeeeeeeccccCCHHHHHHHHHCCCEEEEecCCCC-Ccc------CCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999996 654 556899999999
Q ss_pred hCCCchhhc
Q 024751 252 QQGETEREL 260 (263)
Q Consensus 252 ~~~t~~~~~ 260 (263)
||+|++|++
T Consensus 210 ~g~t~aqva 218 (276)
T 3f7j_A 210 HNKSVAQVI 218 (276)
T ss_dssp HTCCHHHHH
T ss_pred hCCCHHHHH
Confidence 999999985
No 7
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=6.2e-54 Score=380.20 Aligned_cols=243 Identities=35% Similarity=0.610 Sum_probs=207.1
Q ss_pred CCcCeEEcCCCCCccccCeeceeccccC-CChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCcc
Q 024751 12 INVPEVKLSSASGHRKMPVIGLGSAVDN-IDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREE 90 (263)
Q Consensus 12 ~~~~~~~l~~g~~g~~v~~iglG~~~~~-~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~ 90 (263)
..+++++|++| ++||+||||||.++ .+.+++.++++.|++.|||+||||+.||+|+.+|++|++.+++|.+ +|++
T Consensus 3 ~~~~~~~L~tg---~~v~~lglGt~~~g~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~ 78 (323)
T 1afs_A 3 SISLRVALNDG---NFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTV-KRED 78 (323)
T ss_dssp GGGCEEECTTS---CEEESSEEECCCCTTSCTTHHHHHHHHHHHTTCCEEECCTTTTCHHHHHHHHHHHHHTTSC-CGGG
T ss_pred CCCceEECCCC---CeECCeeEecccCCCCCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHHhcCCC-ChHH
Confidence 34788999655 99999999999765 5778999999999999999999999999999999999987666633 8999
Q ss_pred EEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCcc-c--cccCCHHHHHHHHHHHHHc
Q 024751 91 LFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEE-D--LVSLDYNGVWEAMEECQRH 167 (263)
Q Consensus 91 ~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~l~~~ 167 (263)
+||+||+|....+++.+++++++||++||+||||+|++|||....++ +...|...+ . .......++|++|++|+++
T Consensus 79 ~~I~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~-~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~ 157 (323)
T 1afs_A 79 IFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPG-DIFFPRDEHGKLLFETVDICDTWEAMEKCKDA 157 (323)
T ss_dssp CEEEEEECGGGCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSS-SSSSCBCTTCCBCEECCCHHHHHHHHHHHHHT
T ss_pred eEEEEecCCCcCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCC-cccCcccccccccccCCCHHHHHHHHHHHHHc
Confidence 99999999877788999999999999999999999999999643211 100110000 0 0122478999999999999
Q ss_pred CCccEEEecCCCHHHHHHHHHhCCC--CCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCC-----CCCCC
Q 024751 168 GLTKSIGVSNFSPKKIETILAFATI--PPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWG-----TNQVM 240 (263)
Q Consensus 168 G~ir~iGvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~-----~~~~l 240 (263)
|+||+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+++ .+.++
T Consensus 158 Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~ 236 (323)
T 1afs_A 158 GLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGS-SRDKTWVDQKSPVLL 236 (323)
T ss_dssp TSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSC-CCCTTTSCTTSCCGG
T ss_pred CCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccchHHHHHHHHHcCCEEEEecCccC-CccccccccCCcchh
Confidence 9999999999999999999998888 8999999999999989999999999999999999996 87752 23456
Q ss_pred CcHHHHHHHHHhCCCchhhc
Q 024751 241 NNEALKQIAALQQGETEREL 260 (263)
Q Consensus 241 ~~~~l~~ia~~~~~t~~~~~ 260 (263)
.++.+++||++||+|++|++
T Consensus 237 ~~~~l~~ia~~~g~s~aqva 256 (323)
T 1afs_A 237 DDPVLCAIAKKYKQTPALVA 256 (323)
T ss_dssp GCHHHHHHHHHTTCCHHHHH
T ss_pred cCHHHHHHHHHhCCCHHHHH
Confidence 78999999999999999985
No 8
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=9.8e-54 Score=371.35 Aligned_cols=216 Identities=38% Similarity=0.689 Sum_probs=193.2
Q ss_pred cCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEE
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFI 93 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I 93 (263)
|++++|++| ++||+||||||++ +.+++.++++.|++.|||+||||+.||+|+.+|++|++. ++ +|+++||
T Consensus 3 M~~~~l~~g---~~v~~lglGt~~~--~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~~--~R~~~~i 72 (278)
T 1hw6_A 3 VPSIVLNDG---NSIPQLGYGVFKV--PPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS---GI--ARDDLFI 72 (278)
T ss_dssp CCEEECTTS---CEEESBCEECCSC--CGGGHHHHHHHHHHHTCCEEECGGGTTCCHHHHHHHHHH---CC--CGGGCEE
T ss_pred CceEECCCC---CccCCeeEECCcC--ChHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---CC--ChhhEEE
Confidence 678999655 9999999999995 467899999999999999999999999999999999975 65 7999999
Q ss_pred eeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEE
Q 024751 94 TTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSI 173 (263)
Q Consensus 94 ~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 173 (263)
+||+|..+.+++.+++++++||++||+||||+|++|||+... ....++|++|++|+++|+||+|
T Consensus 73 ~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~----------------~~~~e~~~al~~l~~~Gkir~i 136 (278)
T 1hw6_A 73 TTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAA----------------DNYVHAWEKMIELRAAGLTRSI 136 (278)
T ss_dssp EEEECCC-----CHHHHHHHHHHHHTCSCEEEEEECCCCTTC----------------SSHHHHHHHHHHHHHTTSEEEE
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCC----------------CCHHHHHHHHHHHHHcCCccEE
Confidence 999998888899999999999999999999999999995421 1278999999999999999999
Q ss_pred EecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhC
Q 024751 174 GVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQ 253 (263)
Q Consensus 174 Gvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~ 253 (263)
|||||+.++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |. ..++.++.+.++|++|+
T Consensus 137 GvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~----~~~~~~~~l~~ia~~~g 211 (278)
T 1hw6_A 137 GVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQ-GK----YDLFGAEPVTAAAAAHG 211 (278)
T ss_dssp EEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GS----SCCTTSHHHHHHHHHHT
T ss_pred EecCCCHHHHHHHHHhcCCCceeEEEEeCcccCCHHHHHHHHHcCCEEEEeccccC-CC----ccccccHHHHHHHHHhC
Confidence 99999999999999998899999999999999989999999999999999999996 63 23567899999999999
Q ss_pred CCchhhc
Q 024751 254 GETEREL 260 (263)
Q Consensus 254 ~t~~~~~ 260 (263)
+|++|++
T Consensus 212 ~s~aqva 218 (278)
T 1hw6_A 212 KTPAQAV 218 (278)
T ss_dssp CCHHHHH
T ss_pred CCHHHHH
Confidence 9999985
No 9
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=1.2e-53 Score=372.94 Aligned_cols=221 Identities=39% Similarity=0.707 Sum_probs=204.1
Q ss_pred ccCCCcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCC
Q 024751 9 NVSINVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASR 88 (263)
Q Consensus 9 ~~~~~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R 88 (263)
.|+.+++++|||+| ++||+||||||+++ +.+++.++++.|+++|||+||||+.||||+.+|++++.. +. +|
T Consensus 8 ~m~~~~~~v~Ln~G---~~ip~lGlGtw~~~-d~~e~~~~v~~Al~~Gin~~DTA~~YgsE~~vG~~l~~~---~~--~r 78 (290)
T 4gie_A 8 HMNCNYNCVTLHNS---VRMPQLGLGVWRAQ-DGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRES---GV--PR 78 (290)
T ss_dssp TCSSSSCEEECTTS---CEEESBCEECTTCC-TTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHH---CC--CG
T ss_pred ccCCCCCEEEcCCC---CCccceeEECCCCC-CHHHHHHHHHHHHHcCCCEEecccccCCHHHHHHHHHhc---CC--cc
Confidence 46677999999988 99999999999874 667899999999999999999999999999999999986 65 89
Q ss_pred ccEEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcC
Q 024751 89 EELFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHG 168 (263)
Q Consensus 89 ~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G 168 (263)
++++|+||++....+++.+++++++||++||+||||+|++|||+.. ...++|++|++|+++|
T Consensus 79 ~~~~i~tk~~~~~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~------------------~~~e~~~al~~l~~~G 140 (290)
T 4gie_A 79 EEVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK------------------KFVDTWKALEKLYEEK 140 (290)
T ss_dssp GGSEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSS------------------SHHHHHHHHHHHHHTT
T ss_pred hhccccccccccCCChHHHHHHHHHHHHHhCCCceeeEEecCCCCC------------------cchHHHHHHHHHHHCC
Confidence 9999999999988899999999999999999999999999998532 1688999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHH
Q 024751 169 LTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQI 248 (263)
Q Consensus 169 ~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~i 248 (263)
|||+||||||+.+++.++++.+.++|+++|+++++..++.+++++|+++||++++|+||++ |.+.+ ....+.+.++
T Consensus 141 kir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spl~~-G~l~~---~~~~~~l~~i 216 (290)
T 4gie_A 141 KVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGS-GEEAG---ILKNHVLGEI 216 (290)
T ss_dssp SEEEEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-SGGGC---GGGCHHHHHH
T ss_pred CcceeeecCCCHHHHHHHHHhccCCCceeeEeccccchhHHHHHHHHHcCceEeeeccccc-ccccc---cchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999996 87654 3456899999
Q ss_pred HHHhCCCchhhc
Q 024751 249 AALQQGETEREL 260 (263)
Q Consensus 249 a~~~~~t~~~~~ 260 (263)
|++||+|++|++
T Consensus 217 A~~~g~t~aqva 228 (290)
T 4gie_A 217 AKKHNKSPAQVV 228 (290)
T ss_dssp HHHHTCCHHHHH
T ss_pred HHHhCCCHHHHH
Confidence 999999999975
No 10
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=1.2e-53 Score=375.74 Aligned_cols=216 Identities=40% Similarity=0.685 Sum_probs=199.2
Q ss_pred CCCcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCcc
Q 024751 11 SINVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREE 90 (263)
Q Consensus 11 ~~~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~ 90 (263)
+..|++++|++| ++||+||||||.++ +.+++.++++.|++.|||+||||+.||+|+.+|++|++. ++ +|++
T Consensus 37 ~~~m~~~~L~~g---~~v~~lglGt~~~~-~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~--~R~~ 107 (310)
T 3b3e_A 37 TSLKDTVKLHNG---VEMPWFGLGVFKVE-NGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GV--AREE 107 (310)
T ss_dssp SSTTCEEECTTS---CEEESBCEECTTCC-TTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHS---SS--CGGG
T ss_pred ccccceEECCCC---CeeCceeeeCCcCC-CHHHHHHHHHHHHHcCCCEEECCCccCCHHHHHHHHHhc---CC--Ccce
Confidence 334889999765 99999999999974 568899999999999999999999999999999999974 55 7999
Q ss_pred EEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCc
Q 024751 91 LFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLT 170 (263)
Q Consensus 91 ~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i 170 (263)
+||+||+|..+.+++.+++++++||++||+||||+|++|||+.. ...++|++|++|+++|||
T Consensus 108 v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~------------------~~~e~~~al~~l~~~Gki 169 (310)
T 3b3e_A 108 LFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD------------------KYKDTWRALEKLYKDGKI 169 (310)
T ss_dssp CEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS------------------CHHHHHHHHHHHHHTTSE
T ss_pred EEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCcc------------------cHHHHHHHHHHHHHcCCc
Confidence 99999999888889999999999999999999999999999532 168999999999999999
Q ss_pred cEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHH
Q 024751 171 KSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAA 250 (263)
Q Consensus 171 r~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~ 250 (263)
|+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+ +.++.+.++|+
T Consensus 170 r~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l------~~~~~l~~iA~ 242 (310)
T 3b3e_A 170 RAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQL------LDNEVLTQIAE 242 (310)
T ss_dssp EEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTT------TTCHHHHHHHH
T ss_pred ceEeecCCCHHHHHHHHHhcCCCcceeeeeccCccCCHHHHHHHHHcCCEEEEeccccC-CCc------CCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999996 654 45689999999
Q ss_pred HhCCCchhhc
Q 024751 251 LQQGETEREL 260 (263)
Q Consensus 251 ~~~~t~~~~~ 260 (263)
+||+|++|++
T Consensus 243 ~~g~t~aqva 252 (310)
T 3b3e_A 243 KHNKSVAQVI 252 (310)
T ss_dssp HHTCCHHHHH
T ss_pred HhCCCHHHHH
Confidence 9999999985
No 11
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=3e-53 Score=376.89 Aligned_cols=241 Identities=39% Similarity=0.627 Sum_probs=206.0
Q ss_pred cCeEEcCCCCCccccCeeceeccccC-CChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEE
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDN-IDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELF 92 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~-~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~ 92 (263)
+++++|++| ++||+||||||.++ .+.+++.++++.|++.|||+||||+.||+|+.+|++|++.+++|.+ +|+++|
T Consensus 5 ~~~~~L~tg---~~v~~lglGt~~~~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~~~~-~R~~~~ 80 (331)
T 1s1p_A 5 QQCVKLNDG---HFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSV-KREDIF 80 (331)
T ss_dssp -CEEECTTS---CEEESEEEECCCCTTSCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGGCE
T ss_pred CCeEECCCC---CEeCCeeEcCccCCCCCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHHhcCCC-CchheE
Confidence 578899766 99999999999765 6788999999999999999999999999999999999987666633 799999
Q ss_pred EeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCcc-c--cccCCHHHHHHHHHHHHHcCC
Q 024751 93 ITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEE-D--LVSLDYNGVWEAMEECQRHGL 169 (263)
Q Consensus 93 I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~l~~~G~ 169 (263)
|+||+|....+++.+++++++||++||+||||+|++|||....++ +...|.+.. . .......++|++|++|+++|+
T Consensus 81 I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~-~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gk 159 (331)
T 1s1p_A 81 YTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPG-EELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGL 159 (331)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCS-SCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTS
T ss_pred EEeccCCccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCC-cccCCccccccccccccCHHHHHHHHHHHHHcCC
Confidence 999999878889999999999999999999999999999654321 111110000 0 012247899999999999999
Q ss_pred ccEEEecCCCHHHHHHHHHhCCC--CCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCC-----CCCCCCc
Q 024751 170 TKSIGVSNFSPKKIETILAFATI--PPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWG-----TNQVMNN 242 (263)
Q Consensus 170 ir~iGvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~-----~~~~l~~ 242 (263)
||+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+++ .+.++.+
T Consensus 160 ir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~ 238 (331)
T 1s1p_A 160 AKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGS-QRDKRWVDPNSPVLLED 238 (331)
T ss_dssp EEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSCTTSCCGGGC
T ss_pred ccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcChHHHHHHHHHcCCEEEEeccccC-CcccccccCCCcccccC
Confidence 99999999999999999998888 8999999999999889999999999999999999996 87742 2345678
Q ss_pred HHHHHHHHHhCCCchhhc
Q 024751 243 EALKQIAALQQGETEREL 260 (263)
Q Consensus 243 ~~l~~ia~~~~~t~~~~~ 260 (263)
+.+.+||++||+|++|++
T Consensus 239 ~~l~~ia~~~g~s~aqva 256 (331)
T 1s1p_A 239 PVLCALAKKHKRTPALIA 256 (331)
T ss_dssp HHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH
Confidence 999999999999999985
No 12
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=4.7e-53 Score=373.54 Aligned_cols=239 Identities=39% Similarity=0.634 Sum_probs=204.8
Q ss_pred cCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEE
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFI 93 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I 93 (263)
+++++|++| ++||+||||||. .+.+++.++++.|++.|||+||||+.||+|+.+|++|++.+.++.+ +|+++||
T Consensus 2 ~~~~~l~tg---~~v~~lglGt~~--~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~-~R~~v~I 75 (316)
T 3o3r_A 2 TTFVKLRTK---AKMPLVGLGTWK--SPPGQVKEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAV-RREDLFI 75 (316)
T ss_dssp CCEEECTTS---CEEESBEEBCTT--CCTTHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSC-CGGGCEE
T ss_pred CCeEECCCC---CEeCCeeeECCc--CCcHHHHHHHHHHHHcCCCEEEccCccCCHHHHHHHHHHHHhhCCC-ChHHcEE
Confidence 367899887 999999999998 5678999999999999999999999999999999999987666533 8999999
Q ss_pred eeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCcc---ccccCCHHHHHHHHHHHHHcCCc
Q 024751 94 TTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEE---DLVSLDYNGVWEAMEECQRHGLT 170 (263)
Q Consensus 94 ~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~G~i 170 (263)
+||+|....+++.+++++++||++||+||||+|++|||+...+. +...|.... ........++|++|++|+++|+|
T Consensus 76 ~TK~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gki 154 (316)
T 3o3r_A 76 VSKLWSTFFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAG-KEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLV 154 (316)
T ss_dssp EEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCS-SCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSE
T ss_pred EeeeCCCcCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCc-ccccccccccccccccccHHHHHHHHHHHHHcCCC
Confidence 99999888889999999999999999999999999999755432 111111100 01234588999999999999999
Q ss_pred cEEEecCCCHHHHHHHHHhCCC--CCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCC-C---CCCCCCCcHH
Q 024751 171 KSIGVSNFSPKKIETILAFATI--PPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSS-W---GTNQVMNNEA 244 (263)
Q Consensus 171 r~iGvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l-~---~~~~~l~~~~ 244 (263)
|+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.. + ..+.++.++.
T Consensus 155 r~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~~~~~~~~~~~~~~~ 233 (316)
T 3o3r_A 155 KALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGIAVIAYSPLGS-PDRPYAKPEDPVVLEIPK 233 (316)
T ss_dssp EEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHTTTCEEEEECTTCC-TTCTTCCTTSCCSTTCHH
T ss_pred cEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccchHHHHHHHHHcCCEEEEecccCC-CCCccccccchhhhcCHH
Confidence 9999999999999999987765 5999999999999999999999999999999999997 632 2 1234677899
Q ss_pred HHHHHHHhCCCchhhc
Q 024751 245 LKQIAALQQGETEREL 260 (263)
Q Consensus 245 l~~ia~~~~~t~~~~~ 260 (263)
+.+||++||+|++|++
T Consensus 234 l~~ia~~~g~t~aqva 249 (316)
T 3o3r_A 234 IKEIAAKHKKTIAQVL 249 (316)
T ss_dssp HHHHHHHHTCCHHHHH
T ss_pred HHHHHHHhCCCHHHHH
Confidence 9999999999999975
No 13
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=2.4e-53 Score=377.88 Aligned_cols=241 Identities=32% Similarity=0.557 Sum_probs=201.2
Q ss_pred cCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhc---CCCCCCcc
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKL---GLVASREE 90 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~---~~~~~R~~ 90 (263)
.+..++++| ||.+||+||||||. .+++++.++++.|++.|||+||||+.||+|+.+|++|++.++. ++ +|++
T Consensus 12 ~~~~~~~~~-tg~~vp~lGlGt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~vG~al~~~~~~~~~g~--~R~~ 86 (334)
T 3krb_A 12 LEAQTQGPG-SMQYPPRLGFGTWQ--APPEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSGI--KRED 86 (334)
T ss_dssp ----------CCSSCCSBCEECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHCTTSSC--CGGG
T ss_pred eecCCcCCC-CCCccCCeeeeCCC--CCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHhhhccCCC--Chhh
Confidence 455667775 78999999999999 5789999999999999999999999999999999999987776 75 8999
Q ss_pred EEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCC--CCccc--cCCCCccccccCCHHHHHHHHHHHHH
Q 024751 91 LFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAK--PSEKL--RNDIPEEDLVSLDYNGVWEAMEECQR 166 (263)
Q Consensus 91 ~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~ 166 (263)
+||+||+|....+++.+++++++||++||+||||+|++|||.... ++.+. ..+............++|++|++|++
T Consensus 87 v~I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~l~~ 166 (334)
T 3krb_A 87 VWITSKLWNYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVE 166 (334)
T ss_dssp CEEEEEECGGGCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHHHHH
T ss_pred EEEEeeeCCCCCCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHHHHH
Confidence 999999998888899999999999999999999999999996532 11000 00000001112458999999999999
Q ss_pred cCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCC-------CCC
Q 024751 167 HGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGT-------NQV 239 (263)
Q Consensus 167 ~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~-------~~~ 239 (263)
+||||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.|++. +.+
T Consensus 167 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~c~~~gI~v~ayspL~~-G~L~~~~~~~~~~~~~ 245 (334)
T 3krb_A 167 EGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGG-SYADPRDPSGTQKNVI 245 (334)
T ss_dssp HTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-SBC-------CCBCGG
T ss_pred cCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCcccccHHHHHHHHHcCCEEEEEecCCC-CcccCCCCCCCcccch
Confidence 999999999999999999999999999999999999999999999999999999999999996 888642 246
Q ss_pred CCcHHHHHHHHHhCCCchhhc
Q 024751 240 MNNEALKQIAALQQGETEREL 260 (263)
Q Consensus 240 l~~~~l~~ia~~~~~t~~~~~ 260 (263)
+.++.+.+||++||+|++|++
T Consensus 246 ~~~~~l~~iA~~~g~s~aqva 266 (334)
T 3krb_A 246 LECKTLKAIADAKGTSPHCVA 266 (334)
T ss_dssp GGCHHHHHHHHHHTSCHHHHH
T ss_pred hccHHHHHHHHHhCcCHHHhH
Confidence 678999999999999999975
No 14
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=2.1e-53 Score=376.68 Aligned_cols=241 Identities=37% Similarity=0.594 Sum_probs=204.7
Q ss_pred CCcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccE
Q 024751 12 INVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREEL 91 (263)
Q Consensus 12 ~~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~ 91 (263)
..|++++|++| ++||+||||||+ .+.+++.++++.|++.|||+||||+.||+|+.+|++|++.+++|.+ +|+++
T Consensus 3 ~~m~~~~L~tg---~~v~~lglGt~~--~~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~~ 76 (322)
T 1mi3_A 3 ASIPDIKLSSG---HLMPSIGFGCWK--LANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLV-KREEI 76 (322)
T ss_dssp -CCCEEECTTS---CEEESBCEECTT--CCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSC-CGGGC
T ss_pred CCCceEECCCC---CEECCeeeeCCc--CCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCC-ChhhE
Confidence 44688999655 999999999998 5789999999999999999999999999999999999987666633 79999
Q ss_pred EEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCC--CCccccCCCC-----ccc--cccCCHHHHHHHHH
Q 024751 92 FITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAK--PSEKLRNDIP-----EED--LVSLDYNGVWEAME 162 (263)
Q Consensus 92 ~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~--~~~~~~~~~~-----~~~--~~~~~~~~~~~~l~ 162 (263)
||+||+|....+++.+++++++||++||+||||+|++|||.... .+ +...|.. +.. .......++|++|+
T Consensus 77 ~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~ 155 (322)
T 1mi3_A 77 FLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPI-EEKYPPGFYCGDGNNFVYEDVPILETWKALE 155 (322)
T ss_dssp EEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCT-TTCSSCTTCCSSTTCCCBCCCCHHHHHHHHH
T ss_pred EEEEeeCCCCCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcc-cccccccccccccccccccCCCHHHHHHHHH
Confidence 99999998888899999999999999999999999999996432 11 0000100 000 00124789999999
Q ss_pred HHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCC--------
Q 024751 163 ECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSW-------- 234 (263)
Q Consensus 163 ~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~-------- 234 (263)
+|+++|+||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+.
T Consensus 156 ~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~~~~~~~~~ 234 (322)
T 1mi3_A 156 KLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGP-QSFVEMNQGRAL 234 (322)
T ss_dssp HHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-HHHHTTTCHHHH
T ss_pred HHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCcHHHHHHHHHcCCEEEEECCCCC-CCcccccccccc
Confidence 9999999999999999999999999999999999999999999889999999999999999999996 6221
Q ss_pred CCCCCCCcHHHHHHHHHhCCCchhhc
Q 024751 235 GTNQVMNNEALKQIAALQQGETEREL 260 (263)
Q Consensus 235 ~~~~~l~~~~l~~ia~~~~~t~~~~~ 260 (263)
+.+.++.++.+.+||++||+|++|++
T Consensus 235 ~~~~~~~~~~l~~iA~~~g~t~aqva 260 (322)
T 1mi3_A 235 NTPTLFAHDTIKAIAAKYNKTPAEVL 260 (322)
T ss_dssp TSCCTTSCHHHHHHHHHHTCCHHHHH
T ss_pred cCcccccCHHHHHHHHHcCCCHHHHH
Confidence 12346678999999999999999985
No 15
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=1.2e-53 Score=371.45 Aligned_cols=215 Identities=35% Similarity=0.652 Sum_probs=196.5
Q ss_pred CcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEE
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELF 92 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~ 92 (263)
.|++++|++| ++||+||||||++ +.+++.++++.|++.|||+||||+.||+|+.+|++|++. ++ +|+++|
T Consensus 10 ~m~~~~l~~g---~~v~~lglGt~~~--~~~~~~~~v~~Al~~Gi~~iDTA~~Yg~E~~lG~al~~~---~~--~R~~v~ 79 (283)
T 2wzm_A 10 AIPTVTLNDD---NTLPVVGIGVGEL--SDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAAS---GI--PRDEIY 79 (283)
T ss_dssp CCCEEECTTS---CEEESEEEECTTC--CHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHT---CC--CGGGCE
T ss_pred CCceEECCCC---CEEcceeEECCCC--ChHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHhc---CC--CcccEE
Confidence 3789999655 9999999999985 468899999999999999999999999999999999974 55 799999
Q ss_pred EeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE
Q 024751 93 ITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS 172 (263)
Q Consensus 93 I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 172 (263)
|+||+|..+.+++.+++++++||++||+||||+|++|||+... ....++|++|++|+++|+||+
T Consensus 80 i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~----------------~~~~e~~~al~~l~~~Gkir~ 143 (283)
T 2wzm_A 80 VTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDT----------------SKYVDSWGGLMKVKEDGIARS 143 (283)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCH----------------HHHHHHHHHHHHHHHTTSEEE
T ss_pred EEeccCCCCCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCC----------------CCHHHHHHHHHHHHHcCCccE
Confidence 9999998888899999999999999999999999999995321 126799999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHh
Q 024751 173 IGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQ 252 (263)
Q Consensus 173 iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~ 252 (263)
||||||+.++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |. ++.++.+.++|++|
T Consensus 144 iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~------l~~~~~l~~ia~~~ 216 (283)
T 2wzm_A 144 IGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPLGV-GR------LLDHPAVTAIAEAH 216 (283)
T ss_dssp EEEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-TG------GGGCHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHhcCCCcccccccCCcccCCHHHHHHHHHCCCEEEEecCCCC-Cc------ccchHHHHHHHHHh
Confidence 999999999999999998899999999999999989999999999999999999996 53 35678999999999
Q ss_pred CCCchhhc
Q 024751 253 QGETEREL 260 (263)
Q Consensus 253 ~~t~~~~~ 260 (263)
|+|++|++
T Consensus 217 g~s~aqva 224 (283)
T 2wzm_A 217 GRTAAQVL 224 (283)
T ss_dssp TCCHHHHH
T ss_pred CCCHHHHH
Confidence 99999985
No 16
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=2.4e-53 Score=369.32 Aligned_cols=214 Identities=43% Similarity=0.719 Sum_probs=196.8
Q ss_pred CcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEE
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELF 92 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~ 92 (263)
.|++++|++| ++||+||||||+++ +.+++.++++.|++.|||+||||+.||+|+.+|++|++. ++ +|+++|
T Consensus 8 ~m~~~~l~~g---~~v~~lglGt~~~~-~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~~--~R~~~~ 78 (281)
T 1vbj_A 8 LTQSLKLSNG---VMMPVLGFGMWKLQ-DGNEAETATMWAIKSGYRHIDTAAIYKNEESAGRAIASC---GV--PREELF 78 (281)
T ss_dssp CCCEEECTTS---CEEESBCEECTTCC-TTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---SS--CGGGCE
T ss_pred CCceEECCCC---CeecCeeEECCcCC-CHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhc---CC--ChhHEE
Confidence 4789999655 99999999999974 458899999999999999999999999999999999974 54 799999
Q ss_pred EeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE
Q 024751 93 ITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS 172 (263)
Q Consensus 93 I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 172 (263)
|+||+|..+.+++.+++++++||++||+||||+|++|||+ .. ...++|++|++|+++|+||+
T Consensus 79 i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~-----------------~~~~~~~al~~l~~~Gkir~ 140 (281)
T 1vbj_A 79 VTTKLWNSDQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KD-----------------KFIDTWKAFEKLYADKKVRA 140 (281)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SS-----------------CHHHHHHHHHHHHHTTSBSC
T ss_pred EEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CC-----------------CHHHHHHHHHHHHHCCCccE
Confidence 9999998788899999999999999999999999999995 11 17899999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHh
Q 024751 173 IGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQ 252 (263)
Q Consensus 173 iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~ 252 (263)
||||||+.++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |. ++.++.+.++|++|
T Consensus 141 iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~------~~~~~~l~~ia~~~ 213 (281)
T 1vbj_A 141 IGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQKALCEYCKSKNIAVTAWSPLGQ-GH------LVEDARLKAIGGKY 213 (281)
T ss_dssp EEEESCCHHHHHHHHTSCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GT------TTTCHHHHHHHHTT
T ss_pred EEeeCCCHHHHHHHHHhCCCCceeeeEEeccccCCHHHHHHHHHcCCEEEEecCCcC-CC------CCCCHHHHHHHHHh
Confidence 999999999999999988899999999999999989999999999999999999996 63 45678999999999
Q ss_pred CCCchhhc
Q 024751 253 QGETEREL 260 (263)
Q Consensus 253 ~~t~~~~~ 260 (263)
|+|++|++
T Consensus 214 g~s~aqva 221 (281)
T 1vbj_A 214 GKTAAQVM 221 (281)
T ss_dssp TCCHHHHH
T ss_pred CCCHHHHH
Confidence 99999985
No 17
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-53 Score=379.19 Aligned_cols=237 Identities=41% Similarity=0.686 Sum_probs=206.1
Q ss_pred CCCcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCcc
Q 024751 11 SINVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREE 90 (263)
Q Consensus 11 ~~~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~ 90 (263)
...|++++|++| ++||+||||||. ++.++++.|++.|||+||||+.||+|+.+|++|++.+.+|.+ +|++
T Consensus 22 ~~~m~~~~L~tg---~~vs~lglGt~~------~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~-~R~~ 91 (331)
T 3h7r_A 22 AAPIRFFELNTG---AKLPCVGLGTYA------MVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFV-KREE 91 (331)
T ss_dssp ---CCEEECTTS---CEEESBEEECTT------CCHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSS-CGGG
T ss_pred ccCCcEEECCCC---CEecCEeeccHH------HHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHhhcCCC-Cchh
Confidence 334899999766 999999999996 567899999999999999999999999999999987766644 7999
Q ss_pred EEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCc
Q 024751 91 LFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLT 170 (263)
Q Consensus 91 ~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i 170 (263)
+||+||+|..+.+++.+++++++||++||+||||+|++|||+...++. ..| ..+........++|++|++|+++|+|
T Consensus 92 v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~--~~~-~~~~~~~~~~~e~~~aL~~l~~~Gki 168 (331)
T 3h7r_A 92 LFITSKLWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKES--LMP-TPEMLTKPDITSTWKAMEALYDSGKA 168 (331)
T ss_dssp CEEEEEECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTC--SSC-CGGGEECCCHHHHHHHHHHHHHTTSB
T ss_pred EEEEEeeCCCCCCHHHHHHHHHHHHHHcCCCeeEEEEEecCccccccc--ccc-cccccccCCHHHHHHHHHHHHHcCCC
Confidence 999999998888899999999999999999999999999996543210 111 11122234589999999999999999
Q ss_pred cEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHH
Q 024751 171 KSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAA 250 (263)
Q Consensus 171 r~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~ 250 (263)
|+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||+++|..+....++.++.+.+||+
T Consensus 169 r~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~g~~~~~~~~~~~~~~l~~iA~ 248 (331)
T 3h7r_A 169 RAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQQGLHELCKSKGVHLSGYSPLGSQSKGEVRLKVLQNPIVTEVAE 248 (331)
T ss_dssp SSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSCSCTTTTTHHHHTCHHHHHHHH
T ss_pred cEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCCHHHHHHHHHCCCEEEEeCCCCCCCCCCCccchhcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997455555556777899999999
Q ss_pred HhCCCchhhc
Q 024751 251 LQQGETEREL 260 (263)
Q Consensus 251 ~~~~t~~~~~ 260 (263)
+|++|++|++
T Consensus 249 ~~g~t~aqva 258 (331)
T 3h7r_A 249 KLGKTTAQVA 258 (331)
T ss_dssp HHTCCHHHHH
T ss_pred HHCcCHHHHH
Confidence 9999999985
No 18
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=2.3e-53 Score=375.68 Aligned_cols=232 Identities=36% Similarity=0.582 Sum_probs=202.5
Q ss_pred cCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEE
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFI 93 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I 93 (263)
+++++|++| ++||+||||||+ .+.+++.++++.|++.|||+||||+.||+|+.+|++|++.+++|.+ +|+++||
T Consensus 5 ~~~~~l~~g---~~vs~lglGt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~-~R~~~~i 78 (317)
T 1qwk_A 5 TASIKLSNG---VEMPVIGLGTWQ--SSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVV-KREELFI 78 (317)
T ss_dssp CCEEECTTS---CEEESBCEECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHTSC-CGGGCEE
T ss_pred cceEECCCC---CEeCCeeEECCc--CCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCC-ChhheEE
Confidence 478899655 999999999998 5788999999999999999999999999999999999986655622 7999999
Q ss_pred eeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEE
Q 024751 94 TTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSI 173 (263)
Q Consensus 94 ~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 173 (263)
+||+|....+++.+++++++||++||+||||+|++|||+...++ + ..+......++|++|++|+++|+||+|
T Consensus 79 ~TK~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~-~-------~~~~~~~~~e~~~al~~l~~~Gkir~i 150 (317)
T 1qwk_A 79 TTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDD-M-------SEHIASPVEDVWRQFDAVYKAGLAKAV 150 (317)
T ss_dssp EEEECTTTSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTT-S-------CSEECCCHHHHHHHHHHHHHTTSBSSE
T ss_pred EeeeCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccc-c-------ccccCCCHHHHHHHHHHHHHcCCeeEE
Confidence 99999888889999999999999999999999999999642211 0 001112378999999999999999999
Q ss_pred EecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCC-------------CCCCCC
Q 024751 174 GVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSW-------------GTNQVM 240 (263)
Q Consensus 174 Gvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~-------------~~~~~l 240 (263)
|||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.++ ..+.++
T Consensus 151 GvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~~~~~~ 229 (317)
T 1qwk_A 151 GVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGS-PGRVNFTLPTGQKLDWAPAPSDL 229 (317)
T ss_dssp EEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-CCEECCBCTTCCBCCCEECSSGG
T ss_pred EecCCCHHHHHHHHHhcCCccceecceeccccCcHHHHHHHHHcCCEEEEecCccC-CCcccccccccccccccccchhh
Confidence 99999999999999998889999999999999989999999999999999999996 7653 112355
Q ss_pred CcHHHHHHHHHhCCCchhhc
Q 024751 241 NNEALKQIAALQQGETEREL 260 (263)
Q Consensus 241 ~~~~l~~ia~~~~~t~~~~~ 260 (263)
.++.+.+||++||+|++|++
T Consensus 230 ~~~~l~~ia~~~g~s~aqva 249 (317)
T 1qwk_A 230 QDQNVLALAEKTHKTPAQVL 249 (317)
T ss_dssp GCHHHHHHHHHHTCCHHHHH
T ss_pred ccHHHHHHHHHHCcCHHHHH
Confidence 67999999999999999985
No 19
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-53 Score=372.69 Aligned_cols=217 Identities=28% Similarity=0.522 Sum_probs=200.4
Q ss_pred ccCCCcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCC
Q 024751 9 NVSINVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASR 88 (263)
Q Consensus 9 ~~~~~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R 88 (263)
.++..|++++|+ | ++||+||||||++ +.+++.++++.|++.|||+||||+.||+|+.+|++|++. ++ +|
T Consensus 19 ~~~~~m~~~~l~-g---~~v~~lglGt~~~--~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~--~R 87 (298)
T 3up8_A 19 YFQSMMHAVSSN-G---ANIPALGFGTFRM--SGAEVLRILPQALKLGFRHVDTAQIYGNEAEVGEAIQKS---GI--PR 87 (298)
T ss_dssp GGGGSCCEECCT-T---CCEESEEEECTTC--CHHHHHHHHHHHHHHTCCEEECCTTTTCHHHHHHHHHHH---TC--CG
T ss_pred chhccCceEEeC-C---eecCCeeEECCcC--CHHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHc---CC--Ch
Confidence 344458999998 6 9999999999995 578999999999999999999999999999999999986 65 79
Q ss_pred ccEEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcC
Q 024751 89 EELFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHG 168 (263)
Q Consensus 89 ~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G 168 (263)
+++||+||+|..+.+++.+++++++||++||+||||+|++|||+... ...++|++|++|+++|
T Consensus 88 ~~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~-----------------~~~e~~~al~~l~~~G 150 (298)
T 3up8_A 88 ADVFLTTKVWVDNYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDV-----------------PMAERIGALNEVRNAG 150 (298)
T ss_dssp GGCEEEEEECGGGCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSS-----------------CHHHHHHHHHHHHHTT
T ss_pred HHEEEEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCC-----------------CHHHHHHHHHHHHHcC
Confidence 99999999998888999999999999999999999999999996432 2789999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHH
Q 024751 169 LTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQI 248 (263)
Q Consensus 169 ~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~i 248 (263)
+||+||||||+.++++++++.++++|+++|++||++.++.+++++|+++||++++|+||++ |. ++.++.+.++
T Consensus 151 kir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~------l~~~~~l~~i 223 (298)
T 3up8_A 151 KVRHIGISNFNTTQMEEAARLSDAPIATNQVEYHPYLDQTKVLQTARRLGMSLTSYYAMAN-GK------VPADPLLTEI 223 (298)
T ss_dssp SEEEEEEESCCHHHHHHHHHHCSSCEEEEEEECBTTBCCHHHHHHHHHHTCEEEEECTTGG-GH------HHHCHHHHHH
T ss_pred CccEEEEcCCCHHHHHHHHHhCCCCceEEEEecccccccHHHHHHHHHCCCEEEEECCCcC-Cc------ccccchHHHH
Confidence 9999999999999999999998889999999999999999999999999999999999996 64 3556899999
Q ss_pred HHHhCCCchhhc
Q 024751 249 AALQQGETEREL 260 (263)
Q Consensus 249 a~~~~~t~~~~~ 260 (263)
|++|++|++|++
T Consensus 224 a~~~g~s~aqva 235 (298)
T 3up8_A 224 GGRHGKTAAQVA 235 (298)
T ss_dssp HHHHTCCHHHHH
T ss_pred HHHcCCCHHHHH
Confidence 999999999985
No 20
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=3.2e-53 Score=369.91 Aligned_cols=221 Identities=37% Similarity=0.624 Sum_probs=197.3
Q ss_pred cCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEE
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFI 93 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I 93 (263)
.++++|++| ++||+||||||+++. .+++.++++.|++.|||+||||+.||+|+.+|++|++. ++ +|+++||
T Consensus 10 ~~~~~l~~g---~~v~~lglGt~~~~~-~~~~~~~v~~Al~~G~~~~DTA~~Yg~E~~vG~al~~~---~~--~R~~~~I 80 (288)
T 4f40_A 10 KAMVTLSNG---VKMPQFGLGVWQSPA-GEVTENAVKWALCAGYRHIDTAAIYKNEESVGAGLRAS---GV--PREDVFI 80 (288)
T ss_dssp TCEEECTTS---CEEESBCEECTTCCT-THHHHHHHHHHHHTTCCEEECCGGGTCHHHHHHHHHHH---TC--CGGGCEE
T ss_pred CCeEECCCC---CeecceeEECCcCCC-cHHHHHHHHHHHHcCCCeEECcccccCHHHHHHHHHhc---CC--ChhhEEE
Confidence 578899887 999999999999753 58899999999999999999999999999999999986 65 7999999
Q ss_pred eeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEE
Q 024751 94 TTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSI 173 (263)
Q Consensus 94 ~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 173 (263)
+||+|....+++.+++++++||++||+||||+|++|||+...+. ........++|++|++|+++|+||+|
T Consensus 81 ~TK~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~----------~~~~~~~~e~~~al~~l~~~Gkir~i 150 (288)
T 4f40_A 81 TTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDIL----------SKEGKKYLDSWRAFEQLYKEKKVRAI 150 (288)
T ss_dssp EEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHH----------HHHCCHHHHHHHHHHHHHHTTSEEEE
T ss_pred EEecCCCcCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCccc----------ccccccHHHHHHHHHHHHHcCCccEE
Confidence 99999888899999999999999999999999999999642100 00012268999999999999999999
Q ss_pred EecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhC
Q 024751 174 GVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQ 253 (263)
Q Consensus 174 Gvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~ 253 (263)
|||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+ +.+|.+.+||++|+
T Consensus 151 GvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l------~~~~~l~~ia~~~g 223 (288)
T 4f40_A 151 GVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLRAFCDAKQIKVEAWSPLGQ-GKL------LSNPILSAIGAKYN 223 (288)
T ss_dssp EEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTC---CG------GGCHHHHHHHHHHT
T ss_pred EeccCCHHHHHHHHHhCCCCCeEEeccCccccCCHHHHHHHHHCCCEEEEecCCCC-Ccc------cccHHHHHHHHHhC
Confidence 99999999999999988899999999999999999999999999999999999996 655 45789999999999
Q ss_pred CCchhhc
Q 024751 254 GETEREL 260 (263)
Q Consensus 254 ~t~~~~~ 260 (263)
+|++|++
T Consensus 224 ~t~aqva 230 (288)
T 4f40_A 224 KTAAQVI 230 (288)
T ss_dssp CCHHHHH
T ss_pred CCHHHHH
Confidence 9999986
No 21
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=1.3e-52 Score=370.70 Aligned_cols=238 Identities=40% Similarity=0.672 Sum_probs=203.9
Q ss_pred CeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEe
Q 024751 15 PEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFIT 94 (263)
Q Consensus 15 ~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~ 94 (263)
++++|++| ++||+||||||+ .+.+++.++++.|++.|||+||||+.||+|+.+|++|++.+++|.+ +|+++||+
T Consensus 3 ~~~~l~tg---~~v~~lglGt~~--~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~~~I~ 76 (316)
T 1us0_A 3 SRILLNNG---AKMPILGLGTWK--SPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVV-KREELFIV 76 (316)
T ss_dssp SEEECTTS---CEEESBCEECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSS-CGGGCEEE
T ss_pred ceEECCCC---CEECCEeEECCc--CCHHHHHHHHHHHHHcCCCEEEcccccCCHHHHHHHHHHHHhcCCC-ChhHeEEE
Confidence 47888665 999999999998 5788999999999999999999999999999999999987666633 79999999
Q ss_pred eCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccc---cccCCHHHHHHHHHHHHHcCCcc
Q 024751 95 TKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEED---LVSLDYNGVWEAMEECQRHGLTK 171 (263)
Q Consensus 95 tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~G~ir 171 (263)
||+|....+++.+++++++||++||+||||+|++|||+...++ +...|..... .......++|++|++|+++|+||
T Consensus 77 TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir 155 (316)
T 1us0_A 77 SKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPG-KEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVK 155 (316)
T ss_dssp EEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCS-SCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBS
T ss_pred EeeCCCcCCHHHHHHHHHHHHHHhCCCceeeEEEecCcccccc-ccccccccccccccccccHHHHHHHHHHHHHCCCcc
Confidence 9999888889999999999999999999999999999654321 1000100000 00224789999999999999999
Q ss_pred EEEecCCCHHHHHHHHHhCCC--CCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCC----CCCCCCCcHHH
Q 024751 172 SIGVSNFSPKKIETILAFATI--PPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSW----GTNQVMNNEAL 245 (263)
Q Consensus 172 ~iGvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~----~~~~~l~~~~l 245 (263)
+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+. +.+.++.++.+
T Consensus 156 ~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~l 234 (316)
T 1us0_A 156 AIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGS-PDRPWAKPEDPSLLEDPRI 234 (316)
T ss_dssp CEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-TTCTTCCTTSCCTTTCHHH
T ss_pred EEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCCHHHHHHHHHcCCEEEEeccccc-CccccccCCCcccccCHHH
Confidence 999999999999999998888 8999999999999889999999999999999999996 7642 12346778999
Q ss_pred HHHHHHhCCCchhhc
Q 024751 246 KQIAALQQGETEREL 260 (263)
Q Consensus 246 ~~ia~~~~~t~~~~~ 260 (263)
.+||++||+|++|++
T Consensus 235 ~~ia~~~g~s~aqva 249 (316)
T 1us0_A 235 KAIAAKHNKTTAQVL 249 (316)
T ss_dssp HHHHHHHTCCHHHHH
T ss_pred HHHHHHhCCCHHHHH
Confidence 999999999999985
No 22
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=1.5e-52 Score=366.46 Aligned_cols=215 Identities=36% Similarity=0.648 Sum_probs=195.2
Q ss_pred CcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEE
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELF 92 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~ 92 (263)
.+++++|++| ++||+||||||++ +.+++.++++.|++.|||+||||+.||+|+.+|++|++. ++ +|+++|
T Consensus 24 ~~~~~~L~tg---~~vs~lglGt~~~--~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~---~~--~R~~v~ 93 (296)
T 1mzr_A 24 NPTVIKLQDG---NVMPQLGLGVWQA--SNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNA---SV--NREELF 93 (296)
T ss_dssp CCCEEECTTS---CEEESBCEECCSC--CHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---CS--CGGGCE
T ss_pred CCceEECCCC---CeeCCEeEECCCC--CHHHHHHHHHHHHHcCCCEEECCccccCHHHHHHHHHhc---CC--CcccEE
Confidence 5688999655 9999999999995 578899999999999999999999999999999999974 54 799999
Q ss_pred EeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE
Q 024751 93 ITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS 172 (263)
Q Consensus 93 I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 172 (263)
|+||+|..+. +.+++++++||++||+||||+|++|||+... ....++|++|++|+++|+||+
T Consensus 94 I~TK~~~~~~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~----------------~~~~e~~~al~~l~~~Gkir~ 155 (296)
T 1mzr_A 94 ITTKLWNDDH--KRPREALLDSLKKLQLDYIDLYLMHWPVPAI----------------DHYVEAWKGMIELQKEGLIKS 155 (296)
T ss_dssp EEEEECGGGT--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTT----------------CCHHHHHHHHHHHHHTTSEEE
T ss_pred EEeccCCCcH--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCc----------------CCHHHHHHHHHHHHHCCCcCE
Confidence 9999987655 8899999999999999999999999995421 127899999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHh
Q 024751 173 IGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQ 252 (263)
Q Consensus 173 iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~ 252 (263)
||||||+.++++++++.++++|.++|++||++.++.+++++|+++||++++|+||++ |.+ .++.++.+.++|++|
T Consensus 156 iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~~----~~l~~~~l~~ia~~~ 230 (296)
T 1mzr_A 156 IGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQ-GGK----GVFDQKVIRDLADKY 230 (296)
T ss_dssp EEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TCT----TTTTSHHHHHHHHHH
T ss_pred EEEeCCCHHHHHHHHHhcCCCceEEeeecccccCCHHHHHHHHHCCCeEEEeccccC-Ccc----hhcChHHHHHHHHHh
Confidence 999999999999999988899999999999999989999999999999999999996 643 356789999999999
Q ss_pred CCCchhhc
Q 024751 253 QGETEREL 260 (263)
Q Consensus 253 ~~t~~~~~ 260 (263)
|+|++|++
T Consensus 231 g~s~aqva 238 (296)
T 1mzr_A 231 GKTPAQIV 238 (296)
T ss_dssp TCCHHHHH
T ss_pred CCCHHHHH
Confidence 99999985
No 23
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=7.8e-52 Score=362.22 Aligned_cols=211 Identities=39% Similarity=0.680 Sum_probs=192.7
Q ss_pred CCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCC
Q 024751 23 SGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDA 102 (263)
Q Consensus 23 ~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~ 102 (263)
+||++||+||||||++ +.+++.++++.|++.|||+||||+.||+|+.+|++|++.++++.+ +|+++||+||+|..+.
T Consensus 21 ~tg~~v~~lglGt~~~--~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~-~R~~v~I~TK~~~~~~ 97 (298)
T 1vp5_A 21 NNGVEMPILGYGVFQI--PPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIV-RREELFVTTKLWVSDV 97 (298)
T ss_dssp TTSCEEESBCEECTTC--CHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGGCEEEEEECGGGC
T ss_pred CCCCCccCeeEeCCcC--ChHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHhhhccCC-ChhhEEEEeccCCCCC
Confidence 3459999999999985 468899999999999999999999999999999999976544333 7999999999998778
Q ss_pred ChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHH
Q 024751 103 HRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKK 182 (263)
Q Consensus 103 ~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~ 182 (263)
+++.+++++++||++||+||||+|++|||+. ...++|++|++|+++|+||+||||||+.++
T Consensus 98 ~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~-------------------~~~e~~~al~~l~~~Gkir~iGvSn~~~~~ 158 (298)
T 1vp5_A 98 GYESTKKAFEKSLKKLQLEYIDLYLIHQPFG-------------------DVHCAWKAMEEMYKDGLVRAIGVSNFYPDR 158 (298)
T ss_dssp SSHHHHHHHHHHHHHHTCSCEEEEEECSSCS-------------------CHHHHHHHHHHHHHTTSEEEEEEESCCHHH
T ss_pred CHHHHHHHHHHHHHHHCCCcEEEEEecCCCC-------------------CHHHHHHHHHHHHHcCCccEEEecCCCHHH
Confidence 8899999999999999999999999999943 178999999999999999999999999999
Q ss_pred HHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhCCCchhhc
Q 024751 183 IETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQGETEREL 260 (263)
Q Consensus 183 l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~t~~~~~ 260 (263)
++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |. ..++.++.+.++|++||+|++|++
T Consensus 159 l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~----~~~l~~~~l~~ia~~~g~s~aqva 231 (298)
T 1vp5_A 159 LMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAE-GR----KNIFQNGVLRSIAEKYGKTVAQVI 231 (298)
T ss_dssp HHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GG----GGGGGCHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHhCCCCceEEEEecccccCCHHHHHHHHHCCCEEEEeccccc-CC----ccccCcHHHHHHHHHhCCCHHHHH
Confidence 99999999999999999999999989999999999999999999996 53 235667999999999999999985
No 24
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=9.8e-52 Score=366.25 Aligned_cols=241 Identities=36% Similarity=0.634 Sum_probs=210.2
Q ss_pred CcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEE
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELF 92 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~ 92 (263)
++++++||+| ++||+||||||+ .+++++.++++.|++.|||+||||+.||||+.+|++|++....+..-.|++++
T Consensus 1 t~~~v~LntG---~~vp~iGlGtw~--~~~~~a~~~i~~Al~~Gin~~DTA~~YgsE~~vG~al~~~~~~~~~~~r~~~~ 75 (324)
T 4gac_A 1 TASSVLLHTG---QKMPLIGLGTWK--SEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELF 75 (324)
T ss_dssp CCCEEECTTS---CEEESBCEECTT--CCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHBSTTSSBCGGGCE
T ss_pred CCCeEECCCC---CEeccceeECCC--CCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhhhcccceecccccc
Confidence 3688999988 999999999998 57899999999999999999999999999999999999875554322799999
Q ss_pred EeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCc---cccccCCHHHHHHHHHHHHHcCC
Q 024751 93 ITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPE---EDLVSLDYNGVWEAMEECQRHGL 169 (263)
Q Consensus 93 I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~l~~~G~ 169 (263)
+++|++....+++.+++++++||++||+||||+|++|||+..... +...+... .......++++|++|++|+++||
T Consensus 76 ~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gk 154 (324)
T 4gac_A 76 VTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERG-DNPFPKNADGTVRYDSTHYKETWKALEVLVAKGL 154 (324)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSS-SCSSCBCTTSCBCEECCCHHHHHHHHHHHHHTTS
T ss_pred cccccCCCCCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccc-cccccccccCccccCCCCHHHHHHHHHHHHHCCC
Confidence 999999998999999999999999999999999999999764433 11111111 11234568999999999999999
Q ss_pred ccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCC----CCCCCCcHHH
Q 024751 170 TKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWG----TNQVMNNEAL 245 (263)
Q Consensus 170 ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~----~~~~l~~~~l 245 (263)
||+||||||+.+++++++..+.+.|.++|++++++..+.+++++|+++||++++|+||++ |.+++ .+.++..+.+
T Consensus 155 ir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spL~~-g~~~~~~~~~~~~~~~~~l 233 (324)
T 4gac_A 155 VKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAYSPLGS-SDRAWRHPDEPVLLEEPVV 233 (324)
T ss_dssp BSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCC-GGGGGGSTTSCCGGGCHHH
T ss_pred eeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhHHHHHHHHHHhceeeeecCCccc-CccccCCCCCcchhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999996 87753 2345678999
Q ss_pred HHHHHHhCCCchhhc
Q 024751 246 KQIAALQQGETEREL 260 (263)
Q Consensus 246 ~~ia~~~~~t~~~~~ 260 (263)
.+||++||+|++|+.
T Consensus 234 ~~iA~~~g~t~aqva 248 (324)
T 4gac_A 234 LALAEKHGRSPAQIL 248 (324)
T ss_dssp HHHHHHHTCCHHHHH
T ss_pred HHHHHHhCCCHHHHH
Confidence 999999999999975
No 25
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=1.4e-51 Score=367.24 Aligned_cols=231 Identities=37% Similarity=0.724 Sum_probs=200.5
Q ss_pred CeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHH-cCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEE
Q 024751 15 PEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIK-LGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFI 93 (263)
Q Consensus 15 ~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~-~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I 93 (263)
++++|++| ++||+||||||+ .+ +++.++|+.|++ .|||+||||+.||+|+.+|++|++.+++|+ +|+++||
T Consensus 38 ~~~~L~tg---~~vp~lglGt~~--~~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg~E~~vG~al~~~~~~g~--~R~~v~I 109 (344)
T 2bgs_A 38 DHFVLKSG---HAMPAVGLGTWR--AG-SDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGI--DRKDLFV 109 (344)
T ss_dssp CEEECTTS---CEEESBCEECTT--CG-GGHHHHHHHHHHTTCCCEEECCGGGTCHHHHHHHHHHHHHTTC--CGGGCEE
T ss_pred ceEECCCC---CccCCeeEeCCC--Cc-HHHHHHHHHHHHhcCCCEEECCCccCCHHHHHHHHHHhhhcCC--CcccEEE
Confidence 58899655 999999999998 45 889999999999 999999999999999999999998766675 8999999
Q ss_pred eeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEE
Q 024751 94 TTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSI 173 (263)
Q Consensus 94 ~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 173 (263)
+||+|....+++.+++++++||++||+||||+|++|||+...++ +...|..+ ........++|++|++|+++|+||+|
T Consensus 110 ~TK~~~~~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~-~~~~~~~~-~~~~~~~~e~~~aLe~l~~~GkIr~i 187 (344)
T 2bgs_A 110 TSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDG-AHMPPEAG-EVLEFDMEGVWKEMENLVKDGLVKDI 187 (344)
T ss_dssp EEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTT-CCSSCCTT-CEECCCHHHHHHHHHHHHHTTSEEEE
T ss_pred EeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccc-cccccccc-cccCCCHHHHHHHHHHHHHcCCccEE
Confidence 99999878889999999999999999999999999999643211 10001000 01122478999999999999999999
Q ss_pred EecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhC
Q 024751 174 GVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQ 253 (263)
Q Consensus 174 Gvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~ 253 (263)
|||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |. +.++.++.+.+||++||
T Consensus 188 GvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~~~ll~~~~~~gI~v~a~spL~~-G~----~~~~~~~~l~~iA~~~g 262 (344)
T 2bgs_A 188 GVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHITAYSPLGS-SE----KNLAHDPVVEKVANKLN 262 (344)
T ss_dssp EEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCT-TT----TCCTTCHHHHHHHHHHT
T ss_pred EEecCCHHHHHHHHHhcCCCceeeecccCcccCcHHHHHHHHHCCCEEEEeCcccC-CC----chhhccHHHHHHHHHhC
Confidence 99999999999999999999999999999999889999999999999999999996 51 34567899999999999
Q ss_pred CCchhhc
Q 024751 254 GETEREL 260 (263)
Q Consensus 254 ~t~~~~~ 260 (263)
+|++|++
T Consensus 263 ~s~aqva 269 (344)
T 2bgs_A 263 KTPGQVL 269 (344)
T ss_dssp CCHHHHH
T ss_pred CCHHHHH
Confidence 9999985
No 26
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=1.8e-51 Score=362.82 Aligned_cols=218 Identities=36% Similarity=0.661 Sum_probs=199.8
Q ss_pred CcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEE
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELF 92 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~ 92 (263)
..+++|||+| ++||+||||||+++ +.+++.++++.|++.|||+||||+.||+|+.+|++++..++...+ .|++++
T Consensus 39 ~~~~~TLn~G---~~ip~lGlGt~~~~-d~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i-~r~~~~ 113 (314)
T 3b3d_A 39 LQAKATLHNG---VEMPWFGLGVFQVE-EGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGI-SREDLF 113 (314)
T ss_dssp TTCEEECTTS---CEEESBCEECCSCC-CSHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTC-CGGGCE
T ss_pred cCCcEECCCc---CcccceeEECCCCC-CHHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCC-Cccccc
Confidence 3468999988 99999999999974 568899999999999999999999999999999999876655333 899999
Q ss_pred EeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE
Q 024751 93 ITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS 172 (263)
Q Consensus 93 I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 172 (263)
+++|+|..+.+++.+++++++||++||+||||+|++|||+.. ...+.|++|++|+++||||+
T Consensus 114 i~~k~~~~~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~~------------------~~~e~~~al~~l~~~Gkir~ 175 (314)
T 3b3d_A 114 ITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEG------------------KYKEAWRALETLYKEGRIKA 175 (314)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT------------------THHHHHHHHHHHHHTTSEEE
T ss_pred ccccCcCCCCCHHHHHHHHHHHHHHhCCCccccccccccccc------------------chhHHHHHHHHHHHCCCEeE
Confidence 999999999999999999999999999999999999999532 26789999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHh
Q 024751 173 IGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQ 252 (263)
Q Consensus 173 iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~ 252 (263)
||||||+.++++++++.+.++|+++|+++++...+.+++++|+++||++++|+||++ |.| +..+.+.++|++|
T Consensus 176 iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~-G~L------~~~~~~~~ia~~~ 248 (314)
T 3b3d_A 176 IGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQ-GQL------LDHPVLADIAQTY 248 (314)
T ss_dssp EEEESCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTT------TTCHHHHHHHHHT
T ss_pred EEecCCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccC-Ccc------cCchhhHHHHHHc
Confidence 999999999999999999999999999999988889999999999999999999996 766 4567899999999
Q ss_pred CCCchhhc
Q 024751 253 QGETEREL 260 (263)
Q Consensus 253 ~~t~~~~~ 260 (263)
|+|++|++
T Consensus 249 g~t~aqva 256 (314)
T 3b3d_A 249 NKSVAQII 256 (314)
T ss_dssp TCCHHHHH
T ss_pred CCCHHHHH
Confidence 99999985
No 27
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=1.6e-50 Score=359.67 Aligned_cols=219 Identities=27% Similarity=0.389 Sum_probs=193.0
Q ss_pred cCeEEcCCCCCccccCeeceeccccC------CChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCC
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDN------IDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGL 84 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~------~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~ 84 (263)
|++++|+ +||++||+||||||+++ .+.+++.++++.|++.|||+||||+.|| ||+.+|++|++. +
T Consensus 1 M~~~~lg--~tg~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~- 74 (333)
T 1pz1_A 1 MEYTSIA--DTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEY---M- 74 (333)
T ss_dssp CCEEECT--TSSCEEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHH---T-
T ss_pred CCceecC--CCCCcccCEeEechhhcCCcCCCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcC---C-
Confidence 5678886 45699999999999875 2578899999999999999999999999 999999999975 4
Q ss_pred CCCCccEEEeeCCC---CC-----CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHH
Q 024751 85 VASREELFITTKLW---CS-----DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNG 156 (263)
Q Consensus 85 ~~~R~~~~I~tK~~---~~-----~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
+|+++||+||++ .. +.+++.+++++++||++||+||||+|++|||+... ..++
T Consensus 75 --~R~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~-----------------~~~e 135 (333)
T 1pz1_A 75 --KRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLV-----------------PIEE 135 (333)
T ss_dssp --CGGGCEEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTS-----------------CHHH
T ss_pred --CcCeEEEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCC-----------------CHHH
Confidence 699999999996 21 46789999999999999999999999999995432 2789
Q ss_pred HHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCc--HHHHHHHHhCCceEEEccCCCCCCCCC
Q 024751 157 VWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQ--RKLVEFCKSKSIIVTAFSPLGAVGSSW 234 (263)
Q Consensus 157 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~~i~~~~~~gi~v~a~spl~~~G~l~ 234 (263)
+|++|++|+++||||+||||||+.++++++++. .+|+++|++||+++++ .+++++|+++||++++|+||++ |.|+
T Consensus 136 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Lt 212 (333)
T 1pz1_A 136 TAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAV--APLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCR-GLLT 212 (333)
T ss_dssp HHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTT--SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGG-GTTS
T ss_pred HHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhc--CCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccC-CccC
Confidence 999999999999999999999999999999986 5788999999999987 6899999999999999999996 9887
Q ss_pred CCCC---------------CCCc----------HHHHHHHHHhCC-Cchhhc
Q 024751 235 GTNQ---------------VMNN----------EALKQIAALQQG-ETEREL 260 (263)
Q Consensus 235 ~~~~---------------~l~~----------~~l~~ia~~~~~-t~~~~~ 260 (263)
+... .+.+ +.+.+||++||+ |++|++
T Consensus 213 g~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~~s~aqva 264 (333)
T 1pz1_A 213 GKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSVIHLA 264 (333)
T ss_dssp SCCCTTCCCCTTCGGGSCGGGSTTTHHHHHHHHHHHHHHHHHHHSCCHHHHH
T ss_pred CCccccccCCCccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5311 1333 789999999999 999985
No 28
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=5.7e-51 Score=359.62 Aligned_cols=218 Identities=28% Similarity=0.403 Sum_probs=189.4
Q ss_pred cCeEEcCCCCCccccCeeceeccccC-------CChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcC
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDN-------IDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLG 83 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~-------~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~ 83 (263)
|++++|+ +||++||+||||||+++ .+.+++.++++.|++.|||+||||+.|| ||+.+|++|+..
T Consensus 1 M~~~~lg--~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---- 74 (312)
T 1pyf_A 1 MKKAKLG--KSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREF---- 74 (312)
T ss_dssp -CCEECT--TSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTS----
T ss_pred CCeeecC--CCCCcccCEeEeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhc----
Confidence 4678885 45699999999999986 3678899999999999999999999999 899999999853
Q ss_pred CCCCCccEEEeeCC--CC------CCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHH
Q 024751 84 LVASREELFITTKL--WC------SDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYN 155 (263)
Q Consensus 84 ~~~~R~~~~I~tK~--~~------~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~ 155 (263)
+|+++||+||+ |. .+.+++.+++++++||++||+||||+|++|||+... ..+
T Consensus 75 ---~R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~-----------------~~~ 134 (312)
T 1pyf_A 75 ---NREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT-----------------PKD 134 (312)
T ss_dssp ---CGGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSS-----------------CHH
T ss_pred ---CCCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCC-----------------CHH
Confidence 69999999996 33 467889999999999999999999999999995422 278
Q ss_pred HHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcH--HHHHHHHhCCceEEEccCCCCCCCC
Q 024751 156 GVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQR--KLVEFCKSKSIIVTAFSPLGAVGSS 233 (263)
Q Consensus 156 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~--~~i~~~~~~gi~v~a~spl~~~G~l 233 (263)
++|++|++|+++||||+||||||+.++++++++.. +|+++|++||+++++. +++++|+++||++++|+||++ |+|
T Consensus 135 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~L 211 (312)
T 1pyf_A 135 EAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDG--LVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVS-GLL 211 (312)
T ss_dssp HHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTTS--CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTT-TGG
T ss_pred HHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhhC--CceEEeccCCccccchHHHHHHHHHHcCCeEEEeccccc-ccc
Confidence 99999999999999999999999999999998754 5889999999999864 599999999999999999996 988
Q ss_pred CCCCC---CC----------------------CcHHHHHHHHHhCCCchhhc
Q 024751 234 WGTNQ---VM----------------------NNEALKQIAALQQGETEREL 260 (263)
Q Consensus 234 ~~~~~---~l----------------------~~~~l~~ia~~~~~t~~~~~ 260 (263)
++... .+ ..+.+.++|++|++|++|++
T Consensus 212 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqva 263 (312)
T 1pyf_A 212 AGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIV 263 (312)
T ss_dssp GTCCCTTCCCCTTCGGGGSGGGSHHHHHHHHHHHHTTHHHHHHTTSCHHHHH
T ss_pred cCCCCCCCCCCCcccccccccccchhHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 75321 00 12578999999999999985
No 29
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=2.6e-50 Score=357.57 Aligned_cols=223 Identities=26% Similarity=0.349 Sum_probs=192.8
Q ss_pred CcCeEEcCCCCCccccCeeceecc-ccC--CChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCC
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSA-VDN--IDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVA 86 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~-~~~--~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~ 86 (263)
.|.+++|+ +||++||+|||||| .++ .+.+++.++++.|++.|||+||||+.|| ||+.+|++|++. ++
T Consensus 2 ~m~yr~lG--~tg~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~-- 74 (327)
T 3eau_A 2 LQFYRNLG--KSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---GW-- 74 (327)
T ss_dssp CCSEEEST--TSSCEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---TC--
T ss_pred cchhcccC--CCCCcccceeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhc---CC--
Confidence 36788887 56899999999998 343 5788999999999999999999999997 599999999986 65
Q ss_pred CCccEEEeeCCCCC-------CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHH
Q 024751 87 SREELFITTKLWCS-------DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWE 159 (263)
Q Consensus 87 ~R~~~~I~tK~~~~-------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
+|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+...+ .+++|+
T Consensus 75 ~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~-----------------~~e~~~ 137 (327)
T 3eau_A 75 RRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTP-----------------MEETVR 137 (327)
T ss_dssp CGGGCEEEEEESBCCSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC-----------------HHHHHH
T ss_pred ccCeEEEEEeecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCC-----------------HHHHHH
Confidence 79999999998532 347899999999999999999999999999954322 789999
Q ss_pred HHHHHHHcCCccEEEecCCCHHHHHHHHHhC----CCCCeeeccccCCCCCc---HHHHHHHHhCCceEEEccCCCCCCC
Q 024751 160 AMEECQRHGLTKSIGVSNFSPKKIETILAFA----TIPPTVNQVEMNPAWQQ---RKLVEFCKSKSIIVTAFSPLGAVGS 232 (263)
Q Consensus 160 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~~~q~~~~~~~~~---~~~i~~~~~~gi~v~a~spl~~~G~ 232 (263)
+|++|+++||||+||||||+.+++.+++..+ .++|+++|++||++.++ .+++++|+++||++++|+||++ |+
T Consensus 138 al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~ 216 (327)
T 3eau_A 138 AMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLAC-GI 216 (327)
T ss_dssp HHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGG-GG
T ss_pred HHHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccC-ce
Confidence 9999999999999999999999999988754 37899999999999875 3689999999999999999996 98
Q ss_pred CCCCCCC-----------------------------CCcHHHHHHHHHhCCCchhhc
Q 024751 233 SWGTNQV-----------------------------MNNEALKQIAALQQGETEREL 260 (263)
Q Consensus 233 l~~~~~~-----------------------------l~~~~l~~ia~~~~~t~~~~~ 260 (263)
|++.... ...+.+.+||++||+|++|++
T Consensus 217 Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqva 273 (327)
T 3eau_A 217 VSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLA 273 (327)
T ss_dssp GGTTTTTSCCTTSGGGSTTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred ecCcccCCCCCCcccccccccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 8753210 012679999999999999985
No 30
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=1.4e-50 Score=357.87 Aligned_cols=222 Identities=25% Similarity=0.336 Sum_probs=195.1
Q ss_pred cCeEEcCCCCCccccCeeceeccccC---CChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCC
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDN---IDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVAS 87 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~---~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~ 87 (263)
|++++|+++ |++||+||||||+++ .+.+++.++++.|++.|||+||||+.|| ||+.+|++|++. +. +
T Consensus 23 M~~~~Lg~~--~~~vs~lglGt~~~g~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~--~ 95 (319)
T 1ur3_M 23 VQRITIAPQ--GPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLA---PH--L 95 (319)
T ss_dssp CCEEECSTT--CCEEESSEEECTTTTTTTCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHC---GG--G
T ss_pred CceEECCCC--CcccccccEeccccCCCCCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhC---CC--C
Confidence 788999854 689999999999985 4788999999999999999999999999 999999999974 33 6
Q ss_pred CccEEEeeCCCCC------------CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHH
Q 024751 88 REELFITTKLWCS------------DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYN 155 (263)
Q Consensus 88 R~~~~I~tK~~~~------------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~ 155 (263)
|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+... ...
T Consensus 96 R~~v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~-----------------~~~ 158 (319)
T 1ur3_M 96 RERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLM-----------------DAD 158 (319)
T ss_dssp TTTCEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTC-----------------CHH
T ss_pred CCeEEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCC-----------------CHH
Confidence 9999999999641 46789999999999999999999999999995432 278
Q ss_pred HHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcH---HHHHHHHhCCceEEEccCCCCCCC
Q 024751 156 GVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQR---KLVEFCKSKSIIVTAFSPLGAVGS 232 (263)
Q Consensus 156 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~---~~i~~~~~~gi~v~a~spl~~~G~ 232 (263)
++|++|++|+++||||+||||||+.++++++++.++++|+++|++||+++++. +++++|+++||++++|+||++ |.
T Consensus 159 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~-G~ 237 (319)
T 1ur3_M 159 EVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGG-GR 237 (319)
T ss_dssp HHHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTT-TC
T ss_pred HHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccC-cc
Confidence 99999999999999999999999999999999888788999999999998863 499999999999999999996 87
Q ss_pred CCCCCC-CCCcHHHHHHHHHhCCCc-hhhc
Q 024751 233 SWGTNQ-VMNNEALKQIAALQQGET-EREL 260 (263)
Q Consensus 233 l~~~~~-~l~~~~l~~ia~~~~~t~-~~~~ 260 (263)
|+..+. ....+.+.++|++|++|+ +|++
T Consensus 238 L~~~~~~~~~~~~l~~ia~~~g~t~~aqva 267 (319)
T 1ur3_M 238 LFNDDYFQPLRDELAVVAEELNAGSIEQVV 267 (319)
T ss_dssp SSSCGGGHHHHHHHHHHHHHTTCSCHHHHH
T ss_pred ccCCchhHHHHHHHHHHHHHcCCChHHHHH
Confidence 754211 112378999999999999 8875
No 31
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=4.4e-50 Score=358.82 Aligned_cols=217 Identities=22% Similarity=0.388 Sum_probs=191.5
Q ss_pred cCeEEcCCCCCccccCeeceeccccC------CChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCC
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDN------IDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGL 84 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~------~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~ 84 (263)
|++++|+ +||++||+||||||.++ .+.+++.++++.|++.|||+||||+.|| ||+.+|++|+.
T Consensus 19 M~~~~lg--~tg~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~------ 90 (348)
T 3n2t_A 19 SDTIRIP--GIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE------ 90 (348)
T ss_dssp TSEECCT--TCSSCEESEEEECTTSSCSSSCSTTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH------
T ss_pred ceeeecC--CCCCccCCEeEeCccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh------
Confidence 7889986 45799999999999875 3678999999999999999999999999 99999999984
Q ss_pred CCCCccEEEeeCC---C--CC--------CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCcccccc
Q 024751 85 VASREELFITTKL---W--CS--------DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVS 151 (263)
Q Consensus 85 ~~~R~~~~I~tK~---~--~~--------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~ 151 (263)
.|+++||+||+ | .. +.+++.+++++++||++||+||||+|++|||+...
T Consensus 91 --~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~---------------- 152 (348)
T 3n2t_A 91 --KPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKT---------------- 152 (348)
T ss_dssp --SCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTS----------------
T ss_pred --CCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCC----------------
Confidence 69999999999 4 11 25789999999999999999999999999995432
Q ss_pred CCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCc--HHHHHHHHhCCceEEEccCCCC
Q 024751 152 LDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQ--RKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 152 ~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~~i~~~~~~gi~v~a~spl~~ 229 (263)
..+++|++|++|+++||||+||||||+.++++++++.+ +|+++|++||++.++ .+++++|+++||++++|+||++
T Consensus 153 -~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~ 229 (348)
T 3n2t_A 153 -PIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVA--PLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCR 229 (348)
T ss_dssp -CHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGG
T ss_pred -CHHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHhC--CccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccC
Confidence 27899999999999999999999999999999999987 577999999999875 6899999999999999999996
Q ss_pred CCCCCCCCC---------------CCC----------cHHHHHHHHHhCCCchhhc
Q 024751 230 VGSSWGTNQ---------------VMN----------NEALKQIAALQQGETEREL 260 (263)
Q Consensus 230 ~G~l~~~~~---------------~l~----------~~~l~~ia~~~~~t~~~~~ 260 (263)
|+|++... .+. .+.+.+||++||+|++|++
T Consensus 230 -G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqva 284 (348)
T 3n2t_A 230 -GLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFA 284 (348)
T ss_dssp -GGGGTCCCTTCCCCTTSGGGGCGGGSTTHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred -ccccCCccCCCCCCCcchhhcccccchhhHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 98875321 011 1579999999999999985
No 32
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=3.6e-50 Score=361.82 Aligned_cols=222 Identities=26% Similarity=0.364 Sum_probs=193.0
Q ss_pred CcCeEEcCCCCCccccCeeceecc-ccC--CChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCC
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSA-VDN--IDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVA 86 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~-~~~--~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~ 86 (263)
.| +++|+ +||++||+|||||| .++ .+.+++.++|+.|++.|||+||||+.|| ||+.+|++|++. ++
T Consensus 37 ~m-yr~lG--~tg~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~-- 108 (367)
T 3lut_A 37 QF-YRNLG--KSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---GW-- 108 (367)
T ss_dssp CS-EEEST--TSSCEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---TC--
T ss_pred hc-eeecC--CCCCcccceeECCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhC---CC--
Confidence 36 88887 56899999999998 343 5788999999999999999999999998 499999999987 65
Q ss_pred CCccEEEeeCCCCC-------CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHH
Q 024751 87 SREELFITTKLWCS-------DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWE 159 (263)
Q Consensus 87 ~R~~~~I~tK~~~~-------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
+|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+... ..+++|+
T Consensus 109 ~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~-----------------~~~e~~~ 171 (367)
T 3lut_A 109 RRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNT-----------------PMEETVR 171 (367)
T ss_dssp CGGGCEEEEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTS-----------------CHHHHHH
T ss_pred CCceEEEEeccccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCC-----------------CHHHHHH
Confidence 79999999998432 35689999999999999999999999999995432 2789999
Q ss_pred HHHHHHHcCCccEEEecCCCHHHHHHHHHhC----CCCCeeeccccCCCCCcH---HHHHHHHhCCceEEEccCCCCCCC
Q 024751 160 AMEECQRHGLTKSIGVSNFSPKKIETILAFA----TIPPTVNQVEMNPAWQQR---KLVEFCKSKSIIVTAFSPLGAVGS 232 (263)
Q Consensus 160 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~~~q~~~~~~~~~~---~~i~~~~~~gi~v~a~spl~~~G~ 232 (263)
+|++|+++||||+||||||+.+++.+++..+ .++|+++|++||+++++. +++++|+++||++++|+||++ |+
T Consensus 172 al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~ 250 (367)
T 3lut_A 172 AMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLAC-GI 250 (367)
T ss_dssp HHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGG-GG
T ss_pred HHHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEeccccc-cc
Confidence 9999999999999999999999999988754 378999999999999865 899999999999999999996 98
Q ss_pred CCCCCCC--------------------C---------CcHHHHHHHHHhCCCchhhc
Q 024751 233 SWGTNQV--------------------M---------NNEALKQIAALQQGETEREL 260 (263)
Q Consensus 233 l~~~~~~--------------------l---------~~~~l~~ia~~~~~t~~~~~ 260 (263)
|++.... + ..+.+.+||++||+|++|++
T Consensus 251 Ltgk~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqva 307 (367)
T 3lut_A 251 VSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLA 307 (367)
T ss_dssp GGTTTTTSCCTTSGGGSTTCHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred ccCCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 8753210 0 12578999999999999985
No 33
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=1.8e-49 Score=354.75 Aligned_cols=224 Identities=22% Similarity=0.333 Sum_probs=190.0
Q ss_pred CcCeEEcCCCCCccccCeeceeccc-cC--CChHHHHHHHHHHHHcCCcEEeCCCCcCC-----HHHHHHHHHHHHhcCC
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSAV-DN--IDESAMKSAVLESIKLGYRHFDTASLYGT-----ERALGEAIAEALKLGL 84 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~~-~~--~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs-----e~~lG~al~~~~~~~~ 84 (263)
.|++++|+ +||++||+||||||. ++ .+.+++.++++.|++.|||+||||+.||+ |+.+|++|++. +.
T Consensus 12 ~M~~r~lg--~tg~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~---~~ 86 (346)
T 3n6q_A 12 QMQYRYCG--KSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLRED---FA 86 (346)
T ss_dssp SCCEEECT--TSSCEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHH---CT
T ss_pred CceeEecC--CCCCeecCeeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhh---cc
Confidence 38899987 567999999999985 33 56789999999999999999999999996 99999999985 33
Q ss_pred CCCCccEEEeeCCC----CC----CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHH
Q 024751 85 VASREELFITTKLW----CS----DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNG 156 (263)
Q Consensus 85 ~~~R~~~~I~tK~~----~~----~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
. .|+++||+||++ .. ..+++.+++++++||++||+||||+|++|||+... ..++
T Consensus 87 ~-~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~-----------------~~~e 148 (346)
T 3n6q_A 87 A-YRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENT-----------------PMEE 148 (346)
T ss_dssp T-TGGGCEEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTS-----------------CHHH
T ss_pred c-ccccEEEEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCC-----------------CHHH
Confidence 1 499999999963 22 22789999999999999999999999999995432 2789
Q ss_pred HHHHHHHHHHcCCccEEEecCCCHHHHHHHHHh---CCCCCeeeccccCCCCCcH---HHHHHHHhCCceEEEccCCCCC
Q 024751 157 VWEAMEECQRHGLTKSIGVSNFSPKKIETILAF---ATIPPTVNQVEMNPAWQQR---KLVEFCKSKSIIVTAFSPLGAV 230 (263)
Q Consensus 157 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~---~~~~~~~~q~~~~~~~~~~---~~i~~~~~~gi~v~a~spl~~~ 230 (263)
+|++|++|+++||||+||||||+.++++++++. ..++|+++|++||++++.. +++++|+++||++++|+||++
T Consensus 149 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~- 227 (346)
T 3n6q_A 149 TASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQ- 227 (346)
T ss_dssp HHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGG-
T ss_pred HHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccC-
Confidence 999999999999999999999999999887654 4478889999999998752 699999999999999999996
Q ss_pred CCCCCCCC---------------C--CCc-----------HHHHHHHHHhCCCchhhc
Q 024751 231 GSSWGTNQ---------------V--MNN-----------EALKQIAALQQGETEREL 260 (263)
Q Consensus 231 G~l~~~~~---------------~--l~~-----------~~l~~ia~~~~~t~~~~~ 260 (263)
|+|++... . +.. +.+.+||++||+|++|++
T Consensus 228 G~L~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqva 285 (346)
T 3n6q_A 228 GLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMA 285 (346)
T ss_dssp GGGGTSCC-----------------------CCHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred eecCCCccCCCCCccccccccccccccchhhhhHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 98875310 0 111 279999999999999985
No 34
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=8.5e-50 Score=357.62 Aligned_cols=224 Identities=24% Similarity=0.360 Sum_probs=191.0
Q ss_pred CcCeEEcCCCCCccccCeeceecc-ccC--CChHHHHHHHHHHHHcCCcEEeCCCCcCC-----HHHHHHHHHHHHhcCC
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSA-VDN--IDESAMKSAVLESIKLGYRHFDTASLYGT-----ERALGEAIAEALKLGL 84 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~-~~~--~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs-----e~~lG~al~~~~~~~~ 84 (263)
.|++++|+ +||++||+|||||| .++ .+.+++.++++.|++.|||+||||+.||+ |+.+|++|++.+. +
T Consensus 33 ~M~~r~lg--~tg~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~-~- 108 (353)
T 3erp_A 33 TMEYRRCG--RSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFL-P- 108 (353)
T ss_dssp SCCEEECS--SSSCEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTG-G-
T ss_pred cceeeecC--CCCCccCCeeecChhhcCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhcc-C-
Confidence 48899987 55799999999999 454 57889999999999999999999999996 9999999996311 1
Q ss_pred CCCCccEEEeeCCCCC--------CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHH
Q 024751 85 VASREELFITTKLWCS--------DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNG 156 (263)
Q Consensus 85 ~~~R~~~~I~tK~~~~--------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
.|+++||+||++.. ..+++.+++++++||++||+||||+|++|||+...+ .++
T Consensus 109 --~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~-----------------~~e 169 (353)
T 3erp_A 109 --WRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETP-----------------LKE 169 (353)
T ss_dssp --GGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC-----------------HHH
T ss_pred --CCCeEEEEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCC-----------------HHH
Confidence 49999999998422 136899999999999999999999999999954322 789
Q ss_pred HHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhC---CCCCeeeccccCCCCCc--HHHHHHHHhCCceEEEccCCCCCC
Q 024751 157 VWEAMEECQRHGLTKSIGVSNFSPKKIETILAFA---TIPPTVNQVEMNPAWQQ--RKLVEFCKSKSIIVTAFSPLGAVG 231 (263)
Q Consensus 157 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~---~~~~~~~q~~~~~~~~~--~~~i~~~~~~gi~v~a~spl~~~G 231 (263)
+|++|++|+++||||+||||||++++++++++.+ .++|+++|++||++++. .+++++|+++||++++|+||++ |
T Consensus 170 ~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~-G 248 (353)
T 3erp_A 170 TMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAG-G 248 (353)
T ss_dssp HHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGG-G
T ss_pred HHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccc-c
Confidence 9999999999999999999999999999987754 37899999999999874 5799999999999999999996 9
Q ss_pred CCCCCC--------------CCCCc-----------HHHHHHHHHhCCCchhhc
Q 024751 232 SSWGTN--------------QVMNN-----------EALKQIAALQQGETEREL 260 (263)
Q Consensus 232 ~l~~~~--------------~~l~~-----------~~l~~ia~~~~~t~~~~~ 260 (263)
+|++.. ..+.. +.+.+||++|++|++|++
T Consensus 249 ~Ltg~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqva 302 (353)
T 3erp_A 249 QLTDRYLNGIPEDSRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMA 302 (353)
T ss_dssp TSSGGGTC-------------------CCHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ccCCCccCCCCCcccccccccccccccccHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 887531 01111 379999999999999985
No 35
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=1.6e-50 Score=360.20 Aligned_cols=218 Identities=25% Similarity=0.403 Sum_probs=189.8
Q ss_pred cCeEEcCCCCCccccCeeceeccccC------CChHHHHHHHHHHHHcCCcEEeCCCCcC----CHHHHHHHHHHHHhcC
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDN------IDESAMKSAVLESIKLGYRHFDTASLYG----TERALGEAIAEALKLG 83 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~------~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg----se~~lG~al~~~~~~~ 83 (263)
|++++|+ +||++||+||||||+++ .+.+++.++++.|++.|||+||||+.|| ||+.+|++|++.
T Consensus 1 M~~~~lg--~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~---- 74 (337)
T 3v0s_A 1 MPRVKLG--TQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQL---- 74 (337)
T ss_dssp CCEEECS--SSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTS----
T ss_pred CCeeecC--CCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhc----
Confidence 5788886 55799999999999874 4678899999999999999999999998 899999999863
Q ss_pred CCCCCccEEEeeCCCCC---------CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCH
Q 024751 84 LVASREELFITTKLWCS---------DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDY 154 (263)
Q Consensus 84 ~~~~R~~~~I~tK~~~~---------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~ 154 (263)
+|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+...+ .
T Consensus 75 ---~R~~~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~-----------------~ 134 (337)
T 3v0s_A 75 ---PREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVP-----------------I 134 (337)
T ss_dssp ---CGGGCEEEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC-----------------H
T ss_pred ---CCcceEEEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCC-----------------H
Confidence 79999999999754 567899999999999999999999999999954322 7
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCc--HHHHHHHHhCCceEEEccCCCCCCC
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQ--RKLVEFCKSKSIIVTAFSPLGAVGS 232 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~~i~~~~~~gi~v~a~spl~~~G~ 232 (263)
+++|++|++|+++||||+||||||+.++++++++.. +++++|++||++.++ .+++++|+++||++++|+||++ |+
T Consensus 135 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~ 211 (337)
T 3v0s_A 135 EITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVH--PVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGR-GL 211 (337)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHH-HH
T ss_pred HHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhccC--CceEEEeeccccccchhHHHHHHHHHcCceEEEeccccC-cc
Confidence 899999999999999999999999999999999875 466999999999886 5799999999999999999996 87
Q ss_pred CCCCC------------------------CCCCcHHHHHHHHHhCCCchhhc
Q 024751 233 SWGTN------------------------QVMNNEALKQIAALQQGETEREL 260 (263)
Q Consensus 233 l~~~~------------------------~~l~~~~l~~ia~~~~~t~~~~~ 260 (263)
|++.. .....+.+.+||++||+|++|++
T Consensus 212 L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~aqva 263 (337)
T 3v0s_A 212 FWGKAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLA 263 (337)
T ss_dssp HHHHHHHC-------------------------CHHHHHHHHHTTSCHHHHH
T ss_pred cCCCCCCCCCCCcchhhcccccchhhhhhHHHHHHHHHHHHHHhCCCHHHHH
Confidence 65320 01112689999999999999985
No 36
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=1.8e-49 Score=354.65 Aligned_cols=237 Identities=26% Similarity=0.338 Sum_probs=192.1
Q ss_pred cCeEEcCCCCCccccCeeceeccccC--CChHHHHHHHHHHHHcCCcEEeCCCCc---------C-CHHHHHHHHHHHHh
Q 024751 14 VPEVKLSSASGHRKMPVIGLGSAVDN--IDESAMKSAVLESIKLGYRHFDTASLY---------G-TERALGEAIAEALK 81 (263)
Q Consensus 14 ~~~~~l~~g~~g~~v~~iglG~~~~~--~~~~~~~~~l~~A~~~Gi~~~DtA~~Y---------g-se~~lG~al~~~~~ 81 (263)
|++++|+ +||++||+||||||.++ .+.+++.++++.|++.|||+||||+.| | ||+.+|++|++.
T Consensus 1 M~~~~lg--~tg~~vs~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~-- 76 (346)
T 1lqa_A 1 MQYHRIP--HSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH-- 76 (346)
T ss_dssp CCEEECT--TSSCEEESEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH--
T ss_pred CCeeecC--CCCCeecCeeEEccccCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc--
Confidence 5678886 45699999999999886 478899999999999999999999999 2 899999999975
Q ss_pred cCCCCCCccEEEeeCCCCC------------CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCc-cccCCCCccc
Q 024751 82 LGLVASREELFITTKLWCS------------DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSE-KLRNDIPEED 148 (263)
Q Consensus 82 ~~~~~~R~~~~I~tK~~~~------------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~-~~~~~~~~~~ 148 (263)
+ +|+++||+||++.. +.+++.+++++++||++||+||||+|++|||....... +...+..+.
T Consensus 77 -~---~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~- 151 (346)
T 1lqa_A 77 -G---SREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDS- 151 (346)
T ss_dssp -C---CGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSS-
T ss_pred -C---CCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCcccccccccccccccccc-
Confidence 4 69999999999642 26789999999999999999999999999995321100 000000000
Q ss_pred cccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhC---C-CCCeeeccccCCCCCc--HHHHHHHHhCCceEE
Q 024751 149 LVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFA---T-IPPTVNQVEMNPAWQQ--RKLVEFCKSKSIIVT 222 (263)
Q Consensus 149 ~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~---~-~~~~~~q~~~~~~~~~--~~~i~~~~~~gi~v~ 222 (263)
.......++|++|++|+++||||+||||||+.++++++++.+ . .+|+++|++||++.+. .+++++|+++||+++
T Consensus 152 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~ 231 (346)
T 1lqa_A 152 APAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELL 231 (346)
T ss_dssp CCSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEE
T ss_pred ccCCCHHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEE
Confidence 001237899999999999999999999999999988877653 2 5789999999999885 689999999999999
Q ss_pred EccCCCCCCCCCCCC------C--------C---CCcH-------HHHHHHHHhCCCchhhc
Q 024751 223 AFSPLGAVGSSWGTN------Q--------V---MNNE-------ALKQIAALQQGETEREL 260 (263)
Q Consensus 223 a~spl~~~G~l~~~~------~--------~---l~~~-------~l~~ia~~~~~t~~~~~ 260 (263)
+|+||++ |+|++.. . . ..++ .+.+||++||+|++|++
T Consensus 232 a~spL~~-G~L~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqva 292 (346)
T 1lqa_A 232 AYSCLGF-GTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMA 292 (346)
T ss_dssp EECTTGG-GGGGTTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred Eecchhh-hhhcCccccccCCCcchhhcchhhcccccHHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 9999996 9887531 0 0 1223 78999999999999985
No 37
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=2.2e-49 Score=346.08 Aligned_cols=192 Identities=21% Similarity=0.244 Sum_probs=168.2
Q ss_pred CcCeEEcCCCCCccccCeeceeccccC-------------CChHHHHHHHHHHHHcCCcEEeCCCCcC-CHHHHHHHHHH
Q 024751 13 NVPEVKLSSASGHRKMPVIGLGSAVDN-------------IDESAMKSAVLESIKLGYRHFDTASLYG-TERALGEAIAE 78 (263)
Q Consensus 13 ~~~~~~l~~g~~g~~v~~iglG~~~~~-------------~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-se~~lG~al~~ 78 (263)
.|++++|+ +||++||+||||||+++ .+.+++.++++.|++.|||+||||+.|| +|+.+|++|+.
T Consensus 29 ~m~~r~Lg--~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~sE~~lG~al~~ 106 (292)
T 4exb_A 29 HDLHRPLG--DTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGRSEERLGPLLRG 106 (292)
T ss_dssp TTCCEECT--TSSCEECSEEEECSTTTCC---------CCCCHHHHHHHHHHHHHTTCCEEECCTTSTTHHHHHHHHHTT
T ss_pred CceeeecC--CCCCccCCEeEcccccCCCcccccccccCCCCHHHHHHHHHHHHHcCCCEEEcCCccchHHHHHHHHhcc
Confidence 47899996 45799999999999875 3578899999999999999999999999 99999999984
Q ss_pred HHhcCCCCCCccEEEeeCCCC--------CCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccc
Q 024751 79 ALKLGLVASREELFITTKLWC--------SDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLV 150 (263)
Q Consensus 79 ~~~~~~~~~R~~~~I~tK~~~--------~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~ 150 (263)
+|+++||+||++. .+.+++.+++++++||++||+||||+|++|||... ...
T Consensus 107 --------~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d-----~~~-------- 165 (292)
T 4exb_A 107 --------QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGND-----LDI-------- 165 (292)
T ss_dssp --------TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCH-----HHH--------
T ss_pred --------CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCC-----ccc--------
Confidence 6999999999973 25688999999999999999999999999999321 000
Q ss_pred cCCHH-HHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcH-HHHHHHHhCCceEEEccCCC
Q 024751 151 SLDYN-GVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQR-KLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 151 ~~~~~-~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~-~~i~~~~~~gi~v~a~spl~ 228 (263)
... ++|++|++|+++||||+||||||+.++++++++. |+++|++||++.++. +++++|+++||++++|+||+
T Consensus 166 --~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~----~~~~Q~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~ 239 (292)
T 4exb_A 166 --LENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE----GDCAMVTYNLNERAERPVIEYAAAHAKGILVKKALA 239 (292)
T ss_dssp --HHHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH----SSEEEEECSSSCCTTHHHHHHHHHTTCEEEEECCSC
T ss_pred --cchHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh----hcEEeeccccccCCHHHHHHHHHHCCcEEEEecccc
Confidence 133 8999999999999999999999999999999987 789999999999885 99999999999999999999
Q ss_pred CCCCCC
Q 024751 229 AVGSSW 234 (263)
Q Consensus 229 ~~G~l~ 234 (263)
+ |.|+
T Consensus 240 ~-G~L~ 244 (292)
T 4exb_A 240 S-GHAC 244 (292)
T ss_dssp C-----
T ss_pred C-CccC
Confidence 6 7764
No 38
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=2.7e-49 Score=349.48 Aligned_cols=217 Identities=20% Similarity=0.314 Sum_probs=186.1
Q ss_pred CCcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCC
Q 024751 12 INVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVASR 88 (263)
Q Consensus 12 ~~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R 88 (263)
..|++++|. +||++||+||||||+++.+.+++.++++.|++.|||+||||+.|| ||+.+|++|+. +|
T Consensus 19 ~~M~~r~lg--~tg~~vs~lglGt~~~g~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~--------~R 88 (317)
T 1ynp_A 19 SHMKKRQLG--TSDLHVSELGFGCMSLGTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG--------RR 88 (317)
T ss_dssp -CCCEEECT--TSSCEEESBCBCSCCCCSCHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT--------CG
T ss_pred CCcceeecC--CCCCcccCEeEcCcccCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc--------CC
Confidence 347888886 457999999999999876678999999999999999999999998 99999999984 69
Q ss_pred ccEEEeeCCCCC----------CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHH
Q 024751 89 EELFITTKLWCS----------DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVW 158 (263)
Q Consensus 89 ~~~~I~tK~~~~----------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
+++||+||++.. +.+++.+++++++||++||+||||+|++|||+... ...++|
T Consensus 89 ~~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~-----------------~~~e~~ 151 (317)
T 1ynp_A 89 QDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDD-----------------PIDETI 151 (317)
T ss_dssp GGCEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTS-----------------CHHHHH
T ss_pred CeEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCC-----------------ChHHHH
Confidence 999999999642 46789999999999999999999999999995422 168999
Q ss_pred HHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcH-HHHHHHHhCCceEEEccCCCCCCCCCCCC
Q 024751 159 EAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQR-KLVEFCKSKSIIVTAFSPLGAVGSSWGTN 237 (263)
Q Consensus 159 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~-~~i~~~~~~gi~v~a~spl~~~G~l~~~~ 237 (263)
++|++|+++||||+||||||+.++++++++... +.++|++||++.++. .++++|+++||++++|+||++ |.|++..
T Consensus 152 ~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~--~~~~Q~~~nl~~~~~e~l~~~~~~~gI~v~a~spL~~-G~L~~~~ 228 (317)
T 1ynp_A 152 EAFEELKQEGVIRYYGISSIRPNVIKEYLKRSN--IVSIMMQYSILDRRPEEWFPLIQEHGVSVVVRGPVAR-GLLSRRP 228 (317)
T ss_dssp HHHHHHHHHTSEEEEEEECCCHHHHHHHHHHSC--CCEEEEECBTTBCGGGGGHHHHHHTTCEEEEECTTGG-GTTSSSC
T ss_pred HHHHHHHhCCceEEEEecCCCHHHHHHHHhcCC--CEEEeccCCchhCCHHHHHHHHHHcCCeEEEecCccC-cccCCCC
Confidence 999999999999999999999999999999865 679999999998764 399999999999999999996 8887640
Q ss_pred -----CCC------CcHHHHHHHHHhCCCchhhc
Q 024751 238 -----QVM------NNEALKQIAALQQGETEREL 260 (263)
Q Consensus 238 -----~~l------~~~~l~~ia~~~~~t~~~~~ 260 (263)
..+ ..+.+.+||+ ++|++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~l~~ia~--g~s~aqva 260 (317)
T 1ynp_A 229 LPEGEGYLNYRYDELKLLRESLPT--DRPLHELA 260 (317)
T ss_dssp CCTTCCBTTBCHHHHHHHHHHSCS--SSCHHHHH
T ss_pred CccccccccccHHHHHHHHHHHHc--CCCHHHHH
Confidence 011 1267888888 99999885
No 39
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=8.8e-49 Score=351.81 Aligned_cols=220 Identities=23% Similarity=0.235 Sum_probs=183.5
Q ss_pred EcCCCCCccccCeeceeccccC--CChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEE
Q 024751 18 KLSSASGHRKMPVIGLGSAVDN--IDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVASREELF 92 (263)
Q Consensus 18 ~l~~g~~g~~v~~iglG~~~~~--~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~ 92 (263)
.+..+.++..||+||||||+++ .+.+++.++|+.|++.|||+||||+.|| ||+.+|++|++. .+ .|+++|
T Consensus 28 ~~~~~~~~~~ip~lglGt~~~g~~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~--~~---~r~~v~ 102 (360)
T 2bp1_A 28 ALAMSRPPPPRVASVLGTMEMGRRMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGL--GG---GDCRVK 102 (360)
T ss_dssp ----------CCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCT--TS---TTCCCE
T ss_pred ccccCCCCCCCCCEEECchhhCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhc--cC---CCCeEE
Confidence 3333434589999999999987 3788999999999999999999999994 899999999632 12 356799
Q ss_pred EeeCCCCC---CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCC
Q 024751 93 ITTKLWCS---DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGL 169 (263)
Q Consensus 93 I~tK~~~~---~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 169 (263)
|+||++.. +.+++.+++++++||++||+||||+|++|||+... ..+++|++|++|+++||
T Consensus 103 I~TK~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~-----------------~~~e~~~aL~~l~~~Gk 165 (360)
T 2bp1_A 103 IATKANPWDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGT-----------------PVEETLHACQRLHQEGK 165 (360)
T ss_dssp EEEEECCCTTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTS-----------------CHHHHHHHHHHHHHTTS
T ss_pred EEeeecCCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCC-----------------CHHHHHHHHHHHHHCCC
Confidence 99999765 67899999999999999999999999999995432 17899999999999999
Q ss_pred ccEEEecCCCHHHHHHHHHhCC----CCCeeeccccCCCCCc--HHHHHHHHhCCceEEEccCCCCCCCCCCCCC-----
Q 024751 170 TKSIGVSNFSPKKIETILAFAT----IPPTVNQVEMNPAWQQ--RKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQ----- 238 (263)
Q Consensus 170 ir~iGvs~~~~~~l~~~~~~~~----~~~~~~q~~~~~~~~~--~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~----- 238 (263)
||+||||||+.++++++++.+. ++|+++|++||+++++ .+++++|+++||++++|+||++ |+|++...
T Consensus 166 ir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~ 244 (360)
T 2bp1_A 166 FVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAG-GLLTGKYKYEDKD 244 (360)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGT
T ss_pred ccEEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEeccccc-CcccCCccCcCcc
Confidence 9999999999999999887654 7899999999999886 6899999999999999999996 98876411
Q ss_pred ------CCC--------------------cHHHHHHHHH----hCCCchhhc
Q 024751 239 ------VMN--------------------NEALKQIAAL----QQGETEREL 260 (263)
Q Consensus 239 ------~l~--------------------~~~l~~ia~~----~~~t~~~~~ 260 (263)
.+. .+.+.++|++ ||+|++|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqva 296 (360)
T 2bp1_A 245 GKQPVGRFFGNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPSVTSAA 296 (360)
T ss_dssp TTCCSBTTBSSTTHHHHHHHHCCHHHHHHHHHHHHHHHHHHGGGCCCHHHHH
T ss_pred cccccccccccccchhhhhcccchhHHHHHHHHHHHHHHhhhhcCCCHHHHH
Confidence 111 1678999999 999999985
No 40
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=3.2e-48 Score=344.12 Aligned_cols=211 Identities=24% Similarity=0.253 Sum_probs=184.9
Q ss_pred ccCeeceeccccC--CChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC-
Q 024751 27 KMPVIGLGSAVDN--IDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKLWCS- 100 (263)
Q Consensus 27 ~v~~iglG~~~~~--~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~- 100 (263)
.+|+||||||+++ .+.+++.++|+.|++.|||+||||+.|| ||+.+|++|++. +. .|+++||+||++..
T Consensus 4 ~~~~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~--~r~~~~i~TK~~~~~ 78 (327)
T 1gve_A 4 ARPATVLGAMEMGRRMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGL---GR--SGCKVKIATKAAPMF 78 (327)
T ss_dssp CCCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCT---TS--TTCCSEEEEEECSCT
T ss_pred CCCCeEEcccccCCCCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhc---CC--CCCeEEEEEEECCCC
Confidence 5789999999987 3788999999999999999999999994 899999999743 32 47889999999765
Q ss_pred --CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCC
Q 024751 101 --DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNF 178 (263)
Q Consensus 101 --~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 178 (263)
+.+++.+++++++||++||+||||+|++|||+... ...++|++|++|+++||||+||||||
T Consensus 79 ~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~-----------------~~~e~~~al~~l~~~Gkir~iGvSn~ 141 (327)
T 1gve_A 79 GKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGT-----------------PIEETLQACHQLHQEGKFVELGLSNY 141 (327)
T ss_dssp TCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTS-----------------CHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCC-----------------CHHHHHHHHHHHHhCCceeEEEecCC
Confidence 67899999999999999999999999999995432 17899999999999999999999999
Q ss_pred CHHHHHHHHHhCC----CCCeeeccccCCCCCc--HHHHHHHHhCCceEEEccCCCCCCCCCCCC-----------CCCC
Q 024751 179 SPKKIETILAFAT----IPPTVNQVEMNPAWQQ--RKLVEFCKSKSIIVTAFSPLGAVGSSWGTN-----------QVMN 241 (263)
Q Consensus 179 ~~~~l~~~~~~~~----~~~~~~q~~~~~~~~~--~~~i~~~~~~gi~v~a~spl~~~G~l~~~~-----------~~l~ 241 (263)
+.++++++++.+. ++|+++|++||++.++ .+++++|+++||++++|+||++ |+|++.. ..+.
T Consensus 142 ~~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~~~~~~~~~~ 220 (327)
T 1gve_A 142 VSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAG-GLLTGRYKYQDKDGKNPESRFF 220 (327)
T ss_dssp CHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGGSCCCSSSSS
T ss_pred CHHHHHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEeccccc-ccccCcccCCCccccCCCcccc
Confidence 9999999887654 7899999999999886 6899999999999999999996 9887541 1121
Q ss_pred --------------------cHHHHHHHHH----hCCCchhhc
Q 024751 242 --------------------NEALKQIAAL----QQGETEREL 260 (263)
Q Consensus 242 --------------------~~~l~~ia~~----~~~t~~~~~ 260 (263)
.+.+.++|++ ||+|++|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqva 263 (327)
T 1gve_A 221 GNPFSQLYMDRYWKEEHFNGIALVEKALKTTYGPTAPSMISAA 263 (327)
T ss_dssp SCTTHHHHHHHHCSHHHHHHHHHHHHHHHHHHCTTCCCHHHHH
T ss_pred ccccchhhhhcccChHHHHHHHHHHHHHHhhccccCCCHHHHH
Confidence 1688999999 999999985
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=97.46 E-value=3.4e-05 Score=75.14 Aligned_cols=100 Identities=16% Similarity=0.054 Sum_probs=70.0
Q ss_pred HHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe--cCCCH---H----
Q 024751 111 LKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV--SNFSP---K---- 181 (263)
Q Consensus 111 ~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv--s~~~~---~---- 181 (263)
++.+|..|++||+|++ +|.-+.. ....++++++++..+|+|+.+|+ |++.. +
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~------------------~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~ 291 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVA------------------GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADR 291 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCH------------------HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTC
T ss_pred eeccccccCCCCceEE-EECCcCc------------------cHHHHHHHHHHCCCCCCCcEEeeccCCCchhhcccccc
Confidence 4456778999999995 7633110 14578899999999999999955 43333 1
Q ss_pred ------------HHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCC
Q 024751 182 ------------KIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSS 233 (263)
Q Consensus 182 ------------~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l 233 (263)
...+.++.+.++ +.+++|+... .++++.|.++|++|++++|..+.|.+
T Consensus 292 ~~~~~pv~G~~~~~~~~i~tGa~d--v~vV~~n~i~--~~ll~~a~~~Gm~Vit~sp~~~~Grp 351 (807)
T 3cf4_A 292 RPPYAKVIGSMSKELKVIRSGMPD--VIVVDEQCVR--GDIVPEAQKLKIPVIASNPKIMYGLP 351 (807)
T ss_dssp CCCCSEEEESGGGHHHHHHHTCCS--EEEECSSSCC--TTHHHHHHHTTCCEEECSTTCCTTCC
T ss_pred ccccccccccHHHHHHHhhcCCCe--EEEEEecCCC--hHHHHHHHHCCCEEEEechhhhcCCC
Confidence 233445555555 6666666554 36889999999999999999865654
No 42
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=90.35 E-value=8.4 Score=33.92 Aligned_cols=153 Identities=10% Similarity=0.020 Sum_probs=94.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEe-eCCCCCCCChhHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFIT-TKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~-tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
.++++..+..+.+++.|++.|..=-... .+...=+++|+.+ .+++-|. .... ...+++...+ +-+.|+
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~-------g~~~~l~~vDan-~~~~~~~A~~-~~~~l~ 211 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEF-------GSRVRIKSYDFS-HLLNWKDAHR-AIKRLT 211 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH-------GGGCEEEEEECT-TCSCHHHHHH-HHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHc-------CCCCcEEEecCC-CCcCHHHHHH-HHHHHH
Confidence 3567788888889999999886432222 2222334555542 2344555 5542 2334443332 223444
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCee
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~ 196 (263)
.++ +++.++..|... +.++.+.++++.-.|.= |=+-++.+.+.++++...++ +
T Consensus 212 ~~~---i~~~~iEqP~~~---------------------~d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d--~ 264 (391)
T 3gd6_A 212 KYD---LGLEMIESPAPR---------------------NDFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAID--I 264 (391)
T ss_dssp TCC---SSCCEEECCSCT---------------------TCHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCS--E
T ss_pred hcC---CCcceecCCCCh---------------------hhHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCC--E
Confidence 444 333667766321 12567777877666654 88899999999999887665 6
Q ss_pred eccccCCCC---CcHHHHHHHHhCCceEEEccCCC
Q 024751 197 NQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 197 ~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
+|+..+-+- .-..+...|+++|+.++..+.+.
T Consensus 265 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 299 (391)
T 3gd6_A 265 FNISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQE 299 (391)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred EEECchhcCCHHHHHHHHHHHHHcCCEEEecCCCc
Confidence 666654332 22578999999999999876554
No 43
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=85.25 E-value=18 Score=31.42 Aligned_cols=153 Identities=10% Similarity=0.075 Sum_probs=91.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
.++++..+..+.+++.|++.|-.=-... .+...=+++|+.+ .+++-|..... ..++.+...+ +-+.|+.
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~-------g~~~~l~vDaN-~~~~~~~A~~-~~~~l~~ 209 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAA-------GDSITLRIDAN-QGWSVETAIE-TLTLLEP 209 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-------CSSSEEEEECT-TCBCHHHHHH-HHHHHGG
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHHh-------CCCCeEEEECC-CCCChHHHHH-HHHHHhh
Confidence 3577888888889999999875432221 2333345556542 23444555542 2344444332 3344555
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~ 196 (263)
++++++ ..|.+ ...++.+.+++++-.|- ..|=+-++.+++.++++...++ +
T Consensus 210 ~~i~~i-----EqP~~---------------------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d--~ 261 (368)
T 3q45_A 210 YNIQHC-----EEPVS---------------------RNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACD--S 261 (368)
T ss_dssp GCCSCE-----ECCBC---------------------GGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCS--E
T ss_pred cCCCEE-----ECCCC---------------------hhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCC--e
Confidence 555444 44521 11245667777664443 3344568899999999876655 7
Q ss_pred eccccCCCC---CcHHHHHHHHhCCceEEEccCCCC
Q 024751 197 NQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 197 ~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
+|+...-+- .-..+...|+++|+.++..+.+.+
T Consensus 262 v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 297 (368)
T 3q45_A 262 FNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLES 297 (368)
T ss_dssp EEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCC
T ss_pred EEechhhcCCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 777765442 226799999999999998776643
No 44
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=85.12 E-value=19 Score=31.73 Aligned_cols=149 Identities=14% Similarity=0.098 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCCC
Q 024751 42 ESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQIE 121 (263)
Q Consensus 42 ~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~ 121 (263)
+++..+..+.+++.|++.|..=-.-..+...=+++|+.+ | +++-|..... ..++.+. .+ +-+.|+.+++.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~~~~d~~~v~avR~a~--G-----~~~~L~vDaN-~~w~~~~-~~-~~~~l~~~~i~ 233 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIKPGWDVEPLQETRRAV--G-----DHFPLWTDAN-SSFELDQ-WE-TFKAMDAAKCL 233 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECBTTBSHHHHHHHHHHH--C-----TTSCEEEECT-TCCCGGG-HH-HHHHHGGGCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCcchHHHHHHHHHHhc--C-----CCCEEEEeCC-CCCCHHH-HH-HHHHHHhcCCC
Confidence 788888889999999998754322222333345666542 2 2333343432 2334555 33 33567776655
Q ss_pred cccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeeeccc
Q 024751 122 YVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVNQVE 200 (263)
Q Consensus 122 ~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 200 (263)
+ +..|... +.++.+.++++.-.|. ..|=+-++.+.+.++++...++ ++|+.
T Consensus 234 ~-----iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d--~v~~k 285 (400)
T 3mwc_A 234 F-----HEQPLHY---------------------EALLDLKELGERIETPICLDESLISSRVAEFVAKLGISN--IWNIK 285 (400)
T ss_dssp C-----EESCSCT---------------------TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCS--EEEEC
T ss_pred E-----EeCCCCh---------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCC--EEEEc
Confidence 4 4455221 1256777777654443 4455667899999999876655 66666
Q ss_pred cCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 201 MNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 201 ~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
..-+ ..-..+...|+++|+.++..+.+.
T Consensus 286 ~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 316 (400)
T 3mwc_A 286 IQRVGGLLEAIKIYKIATDNGIKLWGGTMPE 316 (400)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred chhhCCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence 5432 223679999999999998876554
No 45
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=84.66 E-value=19 Score=31.07 Aligned_cols=148 Identities=11% Similarity=0.093 Sum_probs=91.5
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
++++..+....+.+.|++.|..--..++ ...+=+++++.+ .+++-|..+.. ..++.+...+-++. |+.
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~~~-l~~ 214 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV-------GDDFGIMVDYN-QSLDVPAAIKRSQA-LQQ 214 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH-------CSSSEEEEECT-TCSCHHHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh-------CCCCEEEEECC-CCCCHHHHHHHHHH-HHH
Confidence 4666777788888999999885322223 222233444431 23455555653 23455655554444 777
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~ 196 (263)
++++++ ..|.. ...|+.+.++++.-.|--++- +-++.+.++++++....+ +
T Consensus 215 ~~i~~i-----E~P~~---------------------~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d--~ 266 (359)
T 1mdl_A 215 EGVTWI-----EEPTL---------------------QHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACR--L 266 (359)
T ss_dssp HTCSCE-----ECCSC---------------------TTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCS--E
T ss_pred hCCCeE-----ECCCC---------------------hhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCC--E
Confidence 887654 34421 123667788887765554443 346788999999876655 6
Q ss_pred eccccCCCC---CcHHHHHHHHhCCceEEEcc
Q 024751 197 NQVEMNPAW---QQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 197 ~q~~~~~~~---~~~~~i~~~~~~gi~v~a~s 225 (263)
+|+..+-+- .-.++...|+++|+.++..+
T Consensus 267 v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 267 AMPDAMKIGGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp ECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS
T ss_pred EeecchhhCCHHHHHHHHHHHHHcCCeEeecc
Confidence 777665432 22578999999999988774
No 46
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=84.40 E-value=20 Score=31.34 Aligned_cols=149 Identities=9% Similarity=-0.007 Sum_probs=89.3
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCCH---HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGTE---RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse---~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
+.++..+....+.+.|++.|..--..++- ..+=+++|+.+ | +++-|..... ..++.+...+-++. |+.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av--g-----~d~~l~vDan-~~~~~~~a~~~~~~-l~~ 232 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL--G-----DAVPLMVDAN-QQWDRPTAQRMCRI-FEP 232 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH--C-----TTSCEEEECT-TCCCHHHHHHHHHH-HGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc--C-----CCCEEEEECC-CCCCHHHHHHHHHH-HHh
Confidence 67778888888999999988753222221 22225555542 2 2333444442 34456666555544 777
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~ 196 (263)
++++++ ..|.. ...++.+.++++.-.|--++- +-++.+.++++++....+ +
T Consensus 233 ~~i~~i-----E~P~~---------------------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~ 284 (393)
T 2og9_A 233 FNLVWI-----EEPLD---------------------AYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAAD--Y 284 (393)
T ss_dssp GCCSCE-----ECCSC---------------------TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS--E
T ss_pred hCCCEE-----ECCCC---------------------cccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCC--E
Confidence 776654 34421 112556777776655543333 456789999999876655 6
Q ss_pred eccccCCC---CCcHHHHHHHHhCCceEEEccC
Q 024751 197 NQVEMNPA---WQQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 197 ~q~~~~~~---~~~~~~i~~~~~~gi~v~a~sp 226 (263)
+|+..+-+ ..-.++...|+++|+.++..+.
T Consensus 285 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~ 317 (393)
T 2og9_A 285 LMPDAPRVGGITPFLKIASLAEHAGLMLAPHFA 317 (393)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSC
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCEEeccCc
Confidence 66654432 2235799999999999986554
No 47
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=84.25 E-value=20 Score=31.10 Aligned_cols=148 Identities=20% Similarity=0.146 Sum_probs=86.4
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQI 120 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~ 120 (263)
++++..+....+.+.|++.|..--.-......=+++++. - +++-|.... ...++.+. .+-++. |+.+++
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v~avr~a-------~-~~~~l~vDa-n~~~~~~~-~~~~~~-l~~~~i 216 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPVRATREA-------F-PDIRLTVDA-NSAYTLAD-AGRLRQ-LDEYDL 216 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHHHHHHH-------C-TTSCEEEEC-TTCCCGGG-HHHHHT-TGGGCC
T ss_pred CHHHHHHHHHHHHHhcccEEEEecChHHHHHHHHHHHHH-------c-CCCeEEEeC-CCCCCHHH-HHHHHH-HHhCCC
Confidence 567777888888999999876421111122223566665 2 334444443 23345565 443333 666655
Q ss_pred CcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeeecc
Q 024751 121 EYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVNQV 199 (263)
Q Consensus 121 ~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 199 (263)
++ +..|.+. +.++.+.+++++-.|- ..|=+-++.+.+.++++....+ ++|+
T Consensus 217 ~~-----iEqP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~v~i 268 (375)
T 1r0m_A 217 TY-----IEQPLAW---------------------DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGG--VINL 268 (375)
T ss_dssp SC-----EECCSCT---------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCS--EEEE
T ss_pred cE-----EECCCCc---------------------ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCC--EEEE
Confidence 44 4555321 1244666666554333 3333457889999999887665 6777
Q ss_pred ccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 200 EMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 200 ~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
..+-+- .-.++...|+++|+.++...-+
T Consensus 269 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 269 KVARVGGHAESRRVHDVAQSFGAPVWCGGML 299 (375)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred CcchhcCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 665432 2257999999999996554433
No 48
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=84.01 E-value=12 Score=32.50 Aligned_cols=151 Identities=18% Similarity=0.182 Sum_probs=87.6
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHH-HHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVV-PALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~-~~~~~sL~~ 117 (263)
++++..+....+.+.|++.|..--... ....+=+++++.+ | +++-|..+.. ..++.+... +-++ .|+.
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~--g-----~~~~l~vDan-~~~~~~~a~~~~~~-~l~~ 211 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRIEAVRERV--G-----NDIAIRVDVN-QGWKNSANTLTALR-SLGH 211 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH--C-----TTSEEEEECT-TTTBSHHHHHHHHH-TSTT
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HHHh
Confidence 567777788888999999987532111 1122234444432 2 2444555542 233444443 3332 2444
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~ 196 (263)
++++ ++..|.+ ...|+.+.++++.-.|--++- +-++.+.+.++++....+ +
T Consensus 212 ~~i~-----~iEqP~~---------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~ 263 (369)
T 2p8b_A 212 LNID-----WIEQPVI---------------------ADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAAD--K 263 (369)
T ss_dssp SCCS-----CEECCBC---------------------TTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCS--E
T ss_pred CCCc-----EEECCCC---------------------cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCC--E
Confidence 4444 4444421 123567778877655543332 446789999999887655 6
Q ss_pred eccccCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 197 NQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 197 ~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
+|+..+-+ ..-.++...|+++|+.++..+.+.
T Consensus 264 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 264 VNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred EEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCc
Confidence 66654332 122578999999999998877654
No 49
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=83.46 E-value=25 Score=31.57 Aligned_cols=97 Identities=13% Similarity=0.138 Sum_probs=62.3
Q ss_pred CChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcC-CccEEE--ecCC
Q 024751 102 AHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHG-LTKSIG--VSNF 178 (263)
Q Consensus 102 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iG--vs~~ 178 (263)
.+++.+.+-.++.++.. +++++..|... +-|+.+.+|.++- +|.-+| +...
T Consensus 279 ~t~~elid~y~~lle~y-----pI~~IEDPl~~---------------------dD~eg~a~Lt~~lg~i~IvGDEl~vT 332 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHY-----PIASIEDPFAE---------------------DDWAAWNKFTVEHGNFQIVGDDLLVT 332 (441)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCT---------------------TCHHHHHHHHHHTTTSEEEESTTTTT
T ss_pred cCHHHHHHHHHHHhhhc-----ceeeecCCCCh---------------------HHHHHHHHHHHhcCCceEEecccccc
Confidence 45666666666666653 48888887431 1245555555543 566666 3345
Q ss_pred CHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEE-ccC
Q 024751 179 SPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTA-FSP 226 (263)
Q Consensus 179 ~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a-~sp 226 (263)
+++.+.++++....+ ++|+..+-.- .-.+++..|+++|+.++. ++.
T Consensus 333 n~~~i~~~Ie~~a~n--~IlIKvnqiGGITEalkaa~lA~~~G~~vmvsHrs 382 (441)
T 3qtp_A 333 NPARVQMAMDKNACN--SVLIKVNQIGTLTETFKTIKMAQEKGWGVMASHRS 382 (441)
T ss_dssp CHHHHHHHHHHTCCS--EEEECGGGTCCHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CHHHHHHHHHcCCCC--EEEecccccccHHHHHHHHHHHHHcCCeEEEeCCC
Confidence 799999999876554 5555655332 225788999999999764 443
No 50
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=81.79 E-value=27 Score=30.76 Aligned_cols=150 Identities=10% Similarity=0.131 Sum_probs=89.5
Q ss_pred ChHHHHHHHHHHHHcCCcEEeC--CCCcCC-----------------HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCC
Q 024751 41 DESAMKSAVLESIKLGYRHFDT--ASLYGT-----------------ERALGEAIAEALKLGLVASREELFITTKLWCSD 101 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~Dt--A~~Ygs-----------------e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~ 101 (263)
++++..+....+.+.|++.|-. ++.||. ....=+++|+.+ .+++-|..... ..
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~-------G~d~~l~vDan-~~ 220 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAV-------GPEVEVAIDMH-GR 220 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHH-------CSSSEEEEECT-TC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhc-------CCCCEEEEECC-CC
Confidence 4677777888889999998763 222332 111223344431 23455555553 33
Q ss_pred CChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCH
Q 024751 102 AHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSP 180 (263)
Q Consensus 102 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~ 180 (263)
++.+...+-++. |+.++++ ++..|.. .+.++.+.++++.-.|--++- +-++.
T Consensus 221 ~~~~~a~~~~~~-l~~~~i~-----~iEeP~~---------------------~~d~~~~~~l~~~~~iPIa~dE~~~~~ 273 (410)
T 2qq6_A 221 FDIPSSIRFARA-MEPFGLL-----WLEEPTP---------------------PENLDALAEVRRSTSTPICAGENVYTR 273 (410)
T ss_dssp CCHHHHHHHHHH-HGGGCCS-----EEECCSC---------------------TTCHHHHHHHHTTCSSCEEECTTCCSH
T ss_pred CCHHHHHHHHHH-HhhcCCC-----eEECCCC---------------------hhhHHHHHHHHhhCCCCEEeCCCcCCH
Confidence 455555554433 6666654 4555521 122567777777655543333 44678
Q ss_pred HHHHHHHHhCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEEccCC
Q 024751 181 KKIETILAFATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 181 ~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl 227 (263)
+.++++++....+ ++|+..+-+ ..-.++...|+++|+.++..+..
T Consensus 274 ~~~~~~i~~~~~d--~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 274 FDFRELFAKRAVD--YVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp HHHHHHHHTTCCS--EECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred HHHHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 9999999876655 666655432 22357899999999998887764
No 51
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=81.29 E-value=23 Score=30.79 Aligned_cols=151 Identities=11% Similarity=0.042 Sum_probs=90.7
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcC-CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYG-TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQ 119 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg 119 (263)
+.++..+....+.+.|++.|..- .| .-+..-+.++... +.+ . ++-|..+.. ..++.+...+-+ +.|+.+|
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~e~v~avr-~a~--g--d~~l~vD~n-~~~~~~~a~~~~-~~l~~~~ 217 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLK--VGRGEKLDLEITAAVR-GEI--G--DARLRLDAN-EGWSVHDAINMC-RKLEKYD 217 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE--CCSCHHHHHHHHHHHH-TTS--T--TCEEEEECT-TCCCHHHHHHHH-HHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--cCCCHHHHHHHHHHHH-HHc--C--CcEEEEecC-CCCCHHHHHHHH-HHHHhcC
Confidence 56777788888899999998852 22 2222233344321 111 2 555666653 334555554443 3577777
Q ss_pred CCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCeeec
Q 024751 120 IEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPTVNQ 198 (263)
Q Consensus 120 ~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~~q 198 (263)
++++ ..|.. ...|+.+.++++.-.|--++- +-++.+.++++++....+ ++|
T Consensus 218 i~~i-----EqP~~---------------------~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d--~v~ 269 (384)
T 2pgw_A 218 IEFI-----EQPTV---------------------SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAAD--MIC 269 (384)
T ss_dssp CSEE-----ECCSC---------------------TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCS--EEE
T ss_pred CCEE-----eCCCC---------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCC--EEE
Confidence 6544 44421 123567777776655554443 345789999999876655 666
Q ss_pred cccCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 199 VEMNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 199 ~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
+..+-+ ..-.++...|+++|+.++..+-+.
T Consensus 270 ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 302 (384)
T 2pgw_A 270 IGPREIGGIQPMMKAAAVAEAAGLKICIHSSFT 302 (384)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCCEEECCCSC
T ss_pred EcchhhCCHHHHHHHHHHHHHCCCeEeeccCcC
Confidence 554432 222578999999999999886443
No 52
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=80.93 E-value=28 Score=30.50 Aligned_cols=149 Identities=13% Similarity=0.029 Sum_probs=88.8
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
+.++..+....+.+.|++.|..--.-+. ....=+++++.+ | +++-|..... ..++.+...+-++. |+.
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~av--G-----~d~~l~vDan-~~~~~~~ai~~~~~-l~~ 245 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREAL--G-----DEFPLMVDAN-QQWDRETAIRMGRK-MEQ 245 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHH--C-----SSSCEEEECT-TCSCHHHHHHHHHH-HGG
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHc--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HHH
Confidence 6777788888899999998875221112 122224555442 2 2334444442 33455665555544 777
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIG-VSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~~ 196 (263)
+++++ +..|.+ .+.|+.+.++++.-.|--++ =+-++.+.++++++....+ +
T Consensus 246 ~~i~~-----iEqP~~---------------------~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~ 297 (398)
T 2pp0_A 246 FNLIW-----IEEPLD---------------------AYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASD--F 297 (398)
T ss_dssp GTCSC-----EECCSC---------------------TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS--E
T ss_pred cCCce-----eeCCCC---------------------hhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC--E
Confidence 77654 444421 11256677777665554333 3456789999999876655 6
Q ss_pred eccccCCC---CCcHHHHHHHHhCCceEEEccC
Q 024751 197 NQVEMNPA---WQQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 197 ~q~~~~~~---~~~~~~i~~~~~~gi~v~a~sp 226 (263)
+|+..+-+ ..-.++...|+++|+.++..+.
T Consensus 298 v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 298 VQPDAPRVGGISPFLKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEeecCc
Confidence 66654432 2235799999999999986544
No 53
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=80.58 E-value=19 Score=31.09 Aligned_cols=147 Identities=18% Similarity=0.112 Sum_probs=84.5
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcC-CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYG-TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQ 119 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg 119 (263)
+.++..+....+++.|++.|..--.-. ..+. =+++++. - +++.|..... ..++.+. .+-+ +.|+.++
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~-v~avr~a-------~-~~~~l~vDan-~~~~~~~-~~~~-~~l~~~~ 208 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKIKPGWDYEV-LKAVREA-------F-PEATLTADAN-SAYSLAN-LAQL-KRLDELR 208 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHH-HHHHHHH-------C-TTSCEEEECT-TCCCGGG-HHHH-HGGGGGC
T ss_pred CHHHHHHHHHHHHHhhhheeeeecChhHHHHH-HHHHHHH-------c-CCCeEEEecC-CCCCHHH-HHHH-HHHHhCC
Confidence 567777788888999999876421111 2233 3666665 2 2333333432 2345565 4433 3366655
Q ss_pred CCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeeec
Q 024751 120 IEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVNQ 198 (263)
Q Consensus 120 ~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 198 (263)
++ ++..|.+. ..++.+.+++++-.|. ..|=+-++.+.+.++++....+ ++|
T Consensus 209 i~-----~iEqP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~v~ 260 (369)
T 2zc8_A 209 LD-----YIEQPLAY---------------------DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGR--VFN 260 (369)
T ss_dssp CS-----CEECCSCT---------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCS--EEE
T ss_pred Cc-----EEECCCCc---------------------ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCC--EEE
Confidence 54 44455321 1234566666654443 3333557889999999887655 666
Q ss_pred cccCCC---CCcHHHHHHHHhCCceEEEccCC
Q 024751 199 VEMNPA---WQQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 199 ~~~~~~---~~~~~~i~~~~~~gi~v~a~spl 227 (263)
+..+-+ ..-.++...|+++|+.++...-+
T Consensus 261 ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 261 VKPARLGGHGESLRVHALAESAGIPLWMGGML 292 (369)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred EchhhhCCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 655432 22357999999999996554433
No 54
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=80.44 E-value=29 Score=30.30 Aligned_cols=151 Identities=9% Similarity=-0.004 Sum_probs=88.6
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQI 120 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~ 120 (263)
+.++..+....+.+.|++.|..--..++-+..-+.++...+ . -.+++-|..... ..++.+...+-++. |+..|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~-a---~G~~~~l~vDan-~~~~~~~a~~~~~~-l~~~g- 217 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT-C---VPAGSKVMIDPN-EAWTSKEALTKLVA-IREAG- 217 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT-T---SCTTCEEEEECT-TCBCHHHHHHHHHH-HHHTT-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH-h---hCCCCeEEEECC-CCCCHHHHHHHHHH-HHhcC-
Confidence 67778888888999999988743222222222233333211 1 123555555553 23455655555544 67622
Q ss_pred CcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcC-CccEEEecCCCHHHHHHHHHhCCCCCeeecc
Q 024751 121 EYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHG-LTKSIGVSNFSPKKIETILAFATIPPTVNQV 199 (263)
Q Consensus 121 ~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 199 (263)
.++.++..|.. ...|+.+.++++.- .|-=++--+.+.+.++++++....+ ++|+
T Consensus 218 --~~i~~iEqP~~---------------------~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d--~v~i 272 (389)
T 2oz8_A 218 --HDLLWVEDPIL---------------------RHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAAD--ILNV 272 (389)
T ss_dssp --CCCSEEESCBC---------------------TTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCS--EEEE
T ss_pred --CCceEEeCCCC---------------------CcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCC--EEEE
Confidence 23445565521 11356777777764 4543433233888999999876665 6666
Q ss_pred ccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 200 EMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 200 ~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
. .-+..-.+++..|+++|+.++..
T Consensus 273 k-GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 273 H-GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp C-SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred C-cCHHHHHHHHHHHHHcCCeEeec
Confidence 6 22222357899999999999988
No 55
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=80.11 E-value=32 Score=30.61 Aligned_cols=147 Identities=10% Similarity=0.078 Sum_probs=86.1
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
.++++..+....+.+.|++.|..--. ++ ....=+++++.+ .+++-|..... ..++.+...+-++. |+
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g-~~~~~d~e~v~avR~a~-------G~d~~l~vDan-~~~~~~~a~~~~~~-l~ 266 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVG-ANVQDDIRRCRLARAAI-------GPDIAMAVDAN-QRWDVGPAIDWMRQ-LA 266 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECC-SCHHHHHHHHHHHHHHH-------CSSSEEEEECT-TCCCHHHHHHHHHT-TG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC-CCHHHHHHHHHHHHHhc-------CCCCeEEEECC-CCCCHHHHHHHHHH-HH
Confidence 46777888888999999998864211 12 112224555532 23344444442 23455554444444 66
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc-CCc-cEEEecCCCHHHHHHHHHhCCCCC
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH-GLT-KSIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~i-r~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
.++++ ++..|... +.++.+.++++. +.| -..|=+-++.+.+.++++....+
T Consensus 267 ~~~i~-----~iEqP~~~---------------------~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d- 319 (441)
T 2hxt_A 267 EFDIA-----WIEEPTSP---------------------DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVD- 319 (441)
T ss_dssp GGCCS-----CEECCSCT---------------------TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCS-
T ss_pred hcCCC-----eeeCCCCH---------------------HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCC-
Confidence 66654 34555221 124566666655 223 23344567899999999887655
Q ss_pred eeeccccCCCC---CcHHHHHHHHhCCceEEEc
Q 024751 195 TVNQVEMNPAW---QQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 195 ~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~ 224 (263)
++|+..+-+- .-..+...|+++|+.+..+
T Consensus 320 -~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 320 -LIQIDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp -EECCCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred -EEEeCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 6776665432 2257899999999998643
No 56
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=79.84 E-value=30 Score=30.06 Aligned_cols=150 Identities=13% Similarity=0.087 Sum_probs=90.7
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQI 120 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~ 120 (263)
++++..+....+.+.|++.|..--.. +-+..-+.++...+ . -.+++-|..+.. ..++.+...+-++. |+.+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~-a---~g~d~~l~vDan-~~~~~~~a~~~~~~-l~~~-- 215 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACLP-L---LEPGEKAMADAN-QGWRVDNAIRLARA-TRDL-- 215 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHGG-G---SCTTCEEEEECT-TCSCHHHHHHHHHH-TTTS--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHH-h---cCCCCEEEEECC-CCCCHHHHHHHHHH-HHhC--
Confidence 56777788888999999998752211 22333344443311 1 234566666653 23444444333322 4443
Q ss_pred CcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCeeecc
Q 024751 121 EYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPTVNQV 199 (263)
Q Consensus 121 ~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~ 199 (263)
++ ++..|. . .|+.+.++++.-.|--++- +-++.+.++++++....+ ++|+
T Consensus 216 ---~i-~iE~P~----------------------~-~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d--~v~i 266 (379)
T 2rdx_A 216 ---DY-ILEQPC----------------------R-SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAE--ICCL 266 (379)
T ss_dssp ---CC-EEECCS----------------------S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCS--EEEE
T ss_pred ---Ce-EEeCCc----------------------C-CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCC--EEEE
Confidence 44 555541 1 3667788887655544443 346789999999987766 6777
Q ss_pred ccCCCC---CcHHHHHHHHhCCceEEEccCCC
Q 024751 200 EMNPAW---QQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 200 ~~~~~~---~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
..+-+- .-.++...|+++|+.++..+-+.
T Consensus 267 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (379)
T 2rdx_A 267 KISNLGGLSKARRTRDFLIDNRMPVVAEDSWG 298 (379)
T ss_dssp ETTTTTSHHHHHHHHHHHHHTTCCEEEECSBC
T ss_pred eccccCCHHHHHHHHHHHHHcCCeEEEeeccC
Confidence 665542 22578999999999999986544
No 57
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=79.25 E-value=32 Score=30.13 Aligned_cols=150 Identities=13% Similarity=0.083 Sum_probs=91.0
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCC----CcCC-----------------HHHHHHHHHHHHhcCCCCCCccEEEeeCCCC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTAS----LYGT-----------------ERALGEAIAEALKLGLVASREELFITTKLWC 99 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~----~Ygs-----------------e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~ 99 (263)
+.++..+....+.+.|++.|..-. .+|. ...+=+++|+.+ .+++.|.....
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~-------G~d~~l~vDan- 223 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAV-------GPDVDIIAEMH- 223 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHH-------CTTSEEEEECT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhc-------CCCCEEEEECC-
Confidence 677788888889999999887532 1221 112223334321 23455665653
Q ss_pred CCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCC
Q 024751 100 SDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNF 178 (263)
Q Consensus 100 ~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~ 178 (263)
..++++...+-++. |+.+++++ +..|... +.++.+.++++.-.|--++- +-+
T Consensus 224 ~~~~~~~a~~~~~~-l~~~~i~~-----iE~P~~~---------------------~~~~~~~~l~~~~~iPIa~dE~~~ 276 (407)
T 2o56_A 224 AFTDTTSAIQFGRM-IEELGIFY-----YEEPVMP---------------------LNPAQMKQVADKVNIPLAAGERIY 276 (407)
T ss_dssp TCSCHHHHHHHHHH-HGGGCCSC-----EECSSCS---------------------SSHHHHHHHHHHCCSCEEECTTCC
T ss_pred CCCCHHHHHHHHHH-HHhcCCCE-----EeCCCCh---------------------hhHHHHHHHHHhCCCCEEeCCCcC
Confidence 33455665555544 77776654 3444211 12566777776655544433 345
Q ss_pred CHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 179 SPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 179 ~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
+.+.++++++....+ ++|+..+-+- .-.++...|+++|+.++..+..
T Consensus 277 ~~~~~~~~i~~~~~d--~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 277 WRWGYRPFLENGSLS--VIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred CHHHHHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 678899999876655 6776665432 2357999999999999987764
No 58
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=78.84 E-value=12 Score=32.24 Aligned_cols=119 Identities=14% Similarity=0.081 Sum_probs=75.3
Q ss_pred HHHHHHhCCCcccEEEe-ecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEec-----CCCHHHHHH
Q 024751 112 KKSLKTLQIEYVDLYLI-HWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVS-----NFSPKKIET 185 (263)
Q Consensus 112 ~~sL~~Lg~~~iDl~~l-h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-----~~~~~~l~~ 185 (263)
++..+..|.|.||+-.- -+|.... ...++..+.++.+++.-. --|-|- +++++.+++
T Consensus 87 ~~~v~~~GAdiIDIg~eStrP~~~~----------------vs~ee~~~~V~~v~~~~~-vPlsIDg~~~~T~~~eV~ea 149 (323)
T 4djd_D 87 QKCVAEYGADLIYLKLDGADPEGAN----------------HSVDQCVATVKEVLQAVG-VPLVVVGCGDVEKDHEVLEA 149 (323)
T ss_dssp HHHHHTTCCSEEEEECGGGCTTTTC----------------CCHHHHHHHHHHHHHHCC-SCEEEECCSCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCccCCCCCCC----------------CCHHHHHHHHHHHHhhCC-ceEEEECCCCCCCCHHHHHH
Confidence 33336789988888544 2442211 124555666777666421 135555 667889999
Q ss_pred HHHhCC-CCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhCCCchhhc
Q 024751 186 ILAFAT-IPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQGETEREL 260 (263)
Q Consensus 186 ~~~~~~-~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~t~~~~~ 260 (263)
.++.+. ..+.++-+..- .-.++.+.|+++|..++.+.|..- -.-..+.+.|.++|+.++.++
T Consensus 150 Aleagag~~~lINsv~~~---~~~~m~~laa~~g~~vVlmh~~d~----------~~~~~l~~~a~~~GI~~e~II 212 (323)
T 4djd_D 150 VAEAAAGENLLLGNAEQE---NYKSLTAACMVHKHNIIARSPLDI----------NICKQLNILINEMNLPLDHIV 212 (323)
T ss_dssp HHHHTTTSCCEEEEEBTT---BCHHHHHHHHHHTCEEEEECSSCH----------HHHHHHHHHHHTTTCCGGGEE
T ss_pred HHHhcCCCCCeEEECCcc---cHHHHHHHHHHhCCeEEEEccchH----------HHHHHHHHHHHHcCCCHHHEE
Confidence 999874 35667654432 226799999999999999987421 011345667788888877654
No 59
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=78.68 E-value=32 Score=29.76 Aligned_cols=149 Identities=11% Similarity=0.114 Sum_probs=89.7
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
+.++..+....+.+.|++.|..--..++ ...+=+++++.+ | +++-|..+.. ..++++...+-++. |+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~~-l~~ 216 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL--G-----DSFPLMVDAN-MKWTVDGAIRAARA-LAP 216 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH--C-----TTSCEEEECT-TCSCHHHHHHHHHH-HGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HHh
Confidence 5777788888899999998875332222 122234445432 2 2344455543 23455555544443 677
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~ 196 (263)
+++++ +..|.. ...|+.+.++++.-.|--++- +-++.+.++++++....+ +
T Consensus 217 ~~i~~-----iEqP~~---------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~ 268 (371)
T 2ovl_A 217 FDLHW-----IEEPTI---------------------PDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLT--L 268 (371)
T ss_dssp GCCSE-----EECCSC---------------------TTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCS--E
T ss_pred cCCCE-----EECCCC---------------------cccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCC--E
Confidence 66553 455521 112556666665544443333 456789999999887655 6
Q ss_pred eccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 197 NQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 197 ~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
+|+..+-+- .-.++...|+++|+.++..+.
T Consensus 269 v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~~ 301 (371)
T 2ovl_A 269 PEPDVSNIGGYTTFRKVAALAEANNMLLTSHGV 301 (371)
T ss_dssp ECCCTTTTTSHHHHHHHHHHHHHTTCCEEECSC
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCeEccccH
Confidence 776665432 225789999999999998764
No 60
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=78.45 E-value=35 Score=30.09 Aligned_cols=150 Identities=16% Similarity=0.153 Sum_probs=91.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCc--C---CH------HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLY--G---TE------RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVV 108 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Y--g---se------~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~ 108 (263)
.++++..+.++.+++.|++.|-.-... + .. ...=+++|+. -.+++-|..... ...+.+...
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~a-------vG~d~~L~vDaN-~~~~~~~A~ 195 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSA-------FGNTVEFGLDFH-GRVSAPMAK 195 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHT-------TGGGSEEEEECC-SCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHH-------hCCCceEEEECC-CCCCHHHHH
Confidence 467888888999999999988761110 0 11 2223444443 234555555543 234444433
Q ss_pred HHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE-EEecCCCHHHHHHHH
Q 024751 109 PALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS-IGVSNFSPKKIETIL 187 (263)
Q Consensus 109 ~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~ 187 (263)
+ +-+.|+.+++++ +..|.+. +.++.+.++++.-.|-- .|=+-++...+.+++
T Consensus 196 ~-~~~~L~~~~i~~-----iEeP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l 248 (405)
T 3rr1_A 196 V-LIKELEPYRPLF-----IEEPVLA---------------------EQAETYARLAAHTHLPIAAGERMFSRFDFKRVL 248 (405)
T ss_dssp H-HHHHHGGGCCSC-----EECSSCC---------------------SSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHH
T ss_pred H-HHHHHHhcCCCE-----EECCCCc---------------------ccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHH
Confidence 3 234456666544 4555321 12356777877655543 334567889999999
Q ss_pred HhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 188 AFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 188 ~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
+...++ ++|+...-+- .-..+...|+++|+.++..+.
T Consensus 249 ~~~a~d--~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 249 EAGGVS--ILQPDLSHAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp HHCCCS--EECCBTTTTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred HHhCCC--eEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 887665 7777765442 235799999999999998765
No 61
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=78.31 E-value=32 Score=29.61 Aligned_cols=153 Identities=12% Similarity=0.119 Sum_probs=91.4
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCCH---HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGTE---RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse---~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
++++..+....+.+.|++.|..--.-++- ...=+++++.+ .+++-|..... ..++.+...+-++. |+.
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~~~-l~~ 210 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV-------GSAVKLRLDAN-QGWRPKEAVTAIRK-MED 210 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH-------CSSSEEEEECT-TCSCHHHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh-------CCCCeEEEECC-CCCCHHHHHHHHHH-Hhh
Confidence 56777777888889999998753221121 22233444431 23455666653 23455555544443 555
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSI-GVSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~ 196 (263)
.+ .++.++..|.+ ...|+.+.++++.-.|--. |=+-++.+.+.++++....+ +
T Consensus 211 ~~---~~i~~iEqP~~---------------------~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~ 264 (366)
T 1tkk_A 211 AG---LGIELVEQPVH---------------------KDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSAD--L 264 (366)
T ss_dssp TT---CCEEEEECCSC---------------------TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCS--E
T ss_pred cC---CCceEEECCCC---------------------cccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCC--E
Confidence 21 34556666632 1125667777765444333 33557889999999877655 6
Q ss_pred eccccCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 197 NQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 197 ~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
+|+..+-+ ..-..+...|+++|+.++..+.+.
T Consensus 265 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 265 INIKLMKAGGISGAEKINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSC
T ss_pred EEeehhhhcCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 66655432 222578999999999999887764
No 62
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=77.98 E-value=20 Score=31.34 Aligned_cols=152 Identities=8% Similarity=0.025 Sum_probs=89.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhC
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQ 119 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg 119 (263)
.++++..+..+.+++.|++.|..=-....+. --+.++... +. -.+++-|..+... .++++...+- -+.|+.+
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~iKiK~G~~~~~-d~~~v~avR-~a---~g~~~~l~vDan~-~~~~~~a~~~-~~~l~~~- 215 (378)
T 3eez_A 144 KSVEETRAVIDRYRQRGYVAHSVKIGGDVER-DIARIRDVE-DI---REPGEIVLYDVNR-GWTRQQALRV-MRATEDL- 215 (378)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSCHHH-HHHHHHHHT-TS---CCTTCEEEEECTT-CCCHHHHHHH-HHHTGGG-
T ss_pred CCHHHHHHHHHHHHhCCCCEEEeccCCCHHH-HHHHHHHHH-HH---cCCCceEEEECCC-CCCHHHHHHH-HHHhccC-
Confidence 4678888888899999999987532211111 122333321 11 2345667767632 3344433222 2233444
Q ss_pred CCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE-EEecCCCHHHHHHHHHhCCCCCeeec
Q 024751 120 IEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS-IGVSNFSPKKIETILAFATIPPTVNQ 198 (263)
Q Consensus 120 ~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~~~q 198 (263)
++ ++..|.. .|+.+.++++.-.|-- .|=+-++.+.+.++++...++ ++|
T Consensus 216 ----~i-~iEqP~~-----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d--~v~ 265 (378)
T 3eez_A 216 ----HV-MFEQPGE-----------------------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAE--VFG 265 (378)
T ss_dssp ----TC-CEECCSS-----------------------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCS--EEE
T ss_pred ----Ce-EEecCCC-----------------------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCC--EEE
Confidence 44 5565521 2566777777655542 334567889999999877655 666
Q ss_pred cccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 199 VEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 199 ~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
+...-+ ..-..+...|+++|+.++..+.+.+
T Consensus 266 ik~~~~GGit~~~~ia~~A~~~g~~~~~~~~~es 299 (378)
T 3eez_A 266 IKLNRVGGLTRAARMRDIALTHGIDMFVMATGGS 299 (378)
T ss_dssp EEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred eCchhcCCHHHHHHHHHHHHHcCCEEEcCCCCCC
Confidence 665432 2235789999999999998766654
No 63
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=77.41 E-value=37 Score=29.79 Aligned_cols=150 Identities=14% Similarity=0.154 Sum_probs=90.1
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCC------C-----------cC-C--H---H---HHHHHHHHHHhcCCCCCCccEEEe
Q 024751 41 DESAMKSAVLESIKLGYRHFDTAS------L-----------YG-T--E---R---ALGEAIAEALKLGLVASREELFIT 94 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~------~-----------Yg-s--e---~---~lG~al~~~~~~~~~~~R~~~~I~ 94 (263)
+.++..+....+.+.|++.|..-. . || + + + .+=+++|+.+ .+++-|.
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~-------G~d~~l~ 222 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAM-------GDDADII 222 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHH-------CSSSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhc-------CCCCEEE
Confidence 677788888889999999887432 2 22 0 1 1 2223334321 2345555
Q ss_pred eCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEE
Q 024751 95 TKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIG 174 (263)
Q Consensus 95 tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG 174 (263)
.... ..++++...+-++. |+.+ ++.++..|... +.|+.+.++++.-.|--++
T Consensus 223 vDan-~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~---------------------~~~~~~~~l~~~~~iPIa~ 274 (410)
T 2gl5_A 223 VEIH-SLLGTNSAIQFAKA-IEKY-----RIFLYEEPIHP---------------------LNSDNMQKVSRSTTIPIAT 274 (410)
T ss_dssp EECT-TCSCHHHHHHHHHH-HGGG-----CEEEEECSSCS---------------------SCHHHHHHHHHHCSSCEEE
T ss_pred EECC-CCCCHHHHHHHHHH-HHhc-----CCCeEECCCCh---------------------hhHHHHHHHHhhCCCCEEe
Confidence 5553 23455555444433 5554 45566666321 1256677777665554443
Q ss_pred e-cCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 175 V-SNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 175 v-s~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
- +-++.+.++++++...++ ++|+..+-+- .-.++...|+++|+.++..+..
T Consensus 275 dE~~~~~~~~~~~i~~~~~d--~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 329 (410)
T 2gl5_A 275 GERSYTRWGYRELLEKQSIA--VAQPDLCLCGGITEGKKICDYANIYDTTVQVHVCG 329 (410)
T ss_dssp CTTCCTTHHHHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred cCCcCCHHHHHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 3 345788999999876655 6776665432 2257999999999999987764
No 64
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=77.12 E-value=35 Score=29.41 Aligned_cols=152 Identities=11% Similarity=0.046 Sum_probs=92.3
Q ss_pred ChHHHHHHHHHHHH-cCCcEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIK-LGYRHFDTASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 41 ~~~~~~~~l~~A~~-~Gi~~~DtA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
++++..+....+++ .|++.|..--..++ ....=+++++.+ .+++-|..... ..++.+...+-++ .|+
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~~-~l~ 212 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV-------GDRASVRVDVN-QGWDEQTASIWIP-RLE 212 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH-------GGGCEEEEECT-TCCCHHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc-------CCCCEEEEECC-CCCCHHHHHHHHH-HHH
Confidence 46777778888898 99999875332222 222334445432 23445555553 2345565555444 577
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIG-VSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~ 195 (263)
.+++++ +..|.+ .+.|+.+.++++.-.|--++ =+-++.+.+.++++....+
T Consensus 213 ~~~i~~-----iEqP~~---------------------~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d-- 264 (370)
T 1nu5_A 213 EAGVEL-----VEQPVP---------------------RANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVD-- 264 (370)
T ss_dssp HHTCCE-----EECCSC---------------------TTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCS--
T ss_pred hcCcce-----EeCCCC---------------------cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCC--
Confidence 777653 455521 12356677777664443332 3456789999999876655
Q ss_pred eeccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 196 VNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 196 ~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|+..+-+ ..-.++...|+++|+.++..+.+.+
T Consensus 265 ~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (370)
T 1nu5_A 265 AFSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDS 301 (370)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EEEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcch
Confidence 666655432 2235789999999999998876643
No 65
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=76.62 E-value=42 Score=30.00 Aligned_cols=148 Identities=12% Similarity=0.080 Sum_probs=87.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
.++++..+..+.+++.|++.|-.--.-. .+...=+++|+.+ .+++-|...... ..+++...+ .++.
T Consensus 200 ~~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~~d~~~v~avR~a~-------G~~~~l~vDaN~-~~~~~~A~~----~~~~ 267 (441)
T 4a35_A 200 YSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMI-------GPEKTLMMDANQ-RWDVPEAVE----WMSK 267 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH-------CTTSEEEEECTT-CCCHHHHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCHHHHHHHHHHHHHHh-------CCCCeEEEECCC-CCCHHHHHH----HHHh
Confidence 5688888889999999999885432111 1222234555542 234455555432 233333222 2333
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHH----cCCccEEEecCCCHHHHHHHHHhCCCC
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQR----HGLTKSIGVSNFSPKKIETILAFATIP 193 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~----~G~ir~iGvs~~~~~~l~~~~~~~~~~ 193 (263)
|. ..+++++..|... +-++.+.++++ .+.=-+.|=+-++...+.++++...++
T Consensus 268 L~--~~~~~~iEeP~~~---------------------~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~d 324 (441)
T 4a35_A 268 LA--KFKPLWIEEPTSP---------------------DDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQ 324 (441)
T ss_dssp HG--GGCCSEEECCSCT---------------------TCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCS
T ss_pred hc--ccCccEEeCCCCc---------------------ccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCC
Confidence 32 2466777777431 11345555555 233345566778899999999876655
Q ss_pred CeeeccccCCCC---CcHHHHHHHHhCCceEEEc
Q 024751 194 PTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 194 ~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~ 224 (263)
++|+...-+- .-..+...|+++|+.+..+
T Consensus 325 --iv~~d~~~~GGit~~~kia~lA~~~gv~v~~H 356 (441)
T 4a35_A 325 --FLQIDSCRLGSVNENLSVLLMAKKFEIPVCPH 356 (441)
T ss_dssp --EECCCTTTSSHHHHHHHHHHHHHHTTCCBCCC
T ss_pred --EEEECccccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 7777765442 2257999999999998654
No 66
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=75.95 E-value=40 Score=29.49 Aligned_cols=151 Identities=9% Similarity=0.074 Sum_probs=89.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCC-CCcC-CH-HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCC--ChhHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTA-SLYG-TE-RALGEAIAEALKLGLVASREELFITTKLWCSDA--HRDLVVPALKKS 114 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA-~~Yg-se-~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~--~~~~i~~~~~~s 114 (263)
.+.++..+....+.+.|++.|..- ...| +- +..-+.++...+. --+++-|..+... .+ +.+...+-++.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a----~G~d~~l~vDan~-~~~~~~~~a~~~~~~- 217 (401)
T 2hzg_A 144 DTPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREG----LGPDGDLMVDVGQ-IFGEDVEAAAARLPT- 217 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHH----HCSSSEEEEECTT-TTTTCHHHHHTTHHH-
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHH----hCCCCeEEEECCC-CCCCCHHHHHHHHHH-
Confidence 357777888888999999998752 0123 21 2222333322110 1234556666532 33 55555554444
Q ss_pred HHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHH-cCCccEEEe-cCCCHHHHHHHHHhCCC
Q 024751 115 LKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQR-HGLTKSIGV-SNFSPKKIETILAFATI 192 (263)
Q Consensus 115 L~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~ir~iGv-s~~~~~~l~~~~~~~~~ 192 (263)
|+.+++++ +..|.. .+.|+.+.++++ .-.|-=++- +-++.+.++++++....
T Consensus 218 l~~~~i~~-----iEqP~~---------------------~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~ 271 (401)
T 2hzg_A 218 LDAAGVLW-----LEEPFD---------------------AGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRI 271 (401)
T ss_dssp HHHTTCSE-----EECCSC---------------------TTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCC
T ss_pred HHhcCCCE-----EECCCC---------------------ccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCC
Confidence 77777654 445421 123667788877 544543333 34578899999988766
Q ss_pred CCeeeccccCCC---CCcHHHHHHHHhCCceEEEc
Q 024751 193 PPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 193 ~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~ 224 (263)
+ ++|+..+-+ ..-.++...|+++|+.++..
T Consensus 272 d--~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 272 G--FIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp S--EEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred C--EEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 5 666655432 22257899999999999877
No 67
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=75.92 E-value=22 Score=30.84 Aligned_cols=151 Identities=17% Similarity=0.188 Sum_probs=90.0
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHh-C
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTL-Q 119 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~L-g 119 (263)
++++..+....+.+.|++.|..--. ++-+..-+.++... +. -.+++-|..+.. ..++.+... +.++.| .
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~avr-~a---~g~~~~l~vDan-~~~~~~~a~----~~~~~l~~ 215 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAAL-AN---QQPDEFFIVDAN-GKLSVETAL----RLLRLLPH 215 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHHT-TT---CCTTCEEEEECT-TBCCHHHHH----HHHHHSCT
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHHH-Hh---cCCCCEEEEECC-CCcCHHHHH----HHHHHHHh
Confidence 5677778888889999998874211 13333334444431 11 134566666653 223443332 334444 2
Q ss_pred CCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCeeec
Q 024751 120 IEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPTVNQ 198 (263)
Q Consensus 120 ~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~~q 198 (263)
..++ ++..|. . .|+.+.++++.-.|--++- +-++.+.++++++....+ ++|
T Consensus 216 --~~~i-~iE~P~----------------------~-~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~v~ 267 (371)
T 2ps2_A 216 --GLDF-ALEAPC----------------------A-TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAE--GID 267 (371)
T ss_dssp --TCCC-EEECCB----------------------S-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCS--EEE
T ss_pred --hcCC-cCcCCc----------------------C-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC--EEE
Confidence 2345 566551 1 3567788877655544433 346789999999987666 666
Q ss_pred cccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 199 VEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 199 ~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
+..+-+ ..-.++...|+++|+.++..+.+.+
T Consensus 268 ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (371)
T 2ps2_A 268 LKISKAGGLTRGRRQRDICLAAGYSVSVQETCGS 301 (371)
T ss_dssp EEHHHHTSHHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred echhhcCCHHHHHHHHHHHHHcCCeEEecCCCcC
Confidence 655432 2225788999999999998877654
No 68
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=75.57 E-value=37 Score=29.68 Aligned_cols=150 Identities=12% Similarity=0.176 Sum_probs=89.5
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
++++..+....+.+.|++.|..--. ++ ....=+++++.+ | +++-|..... ..++.+...+-++ .|+.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g-~~~~~~~e~v~avR~a~--g-----~d~~l~vDan-~~~~~~~a~~~~~-~l~~ 214 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAG-GPLKADIAMVAEVRRAV--G-----DDVDLFIDIN-GAWTYDQALTTIR-ALEK 214 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECC-SCHHHHHHHHHHHHHHH--C-----TTSCEEEECT-TCCCHHHHHHHHH-HHGG
T ss_pred CHHHHHHHHHHHHHhhhhheeeccc-CCHHHHHHHHHHHHHhh--C-----CCCEEEEECC-CCCCHHHHHHHHH-HHHh
Confidence 5677777888888999998764221 12 222224455432 2 2334444442 3345555554443 5677
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIG-VSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~~ 196 (263)
+++++ +..|.+ .+.++.+.++++.-.|--.+ =+-++.+.++++++....+ +
T Consensus 215 ~~i~~-----iEqP~~---------------------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~ 266 (397)
T 2qde_A 215 YNLSK-----IEQPLP---------------------AWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAAD--G 266 (397)
T ss_dssp GCCSC-----EECCSC---------------------TTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCS--E
T ss_pred CCCCE-----EECCCC---------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCC--E
Confidence 76654 444421 12356777777765554333 3456789999999887655 6
Q ss_pred eccccCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 197 NQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 197 ~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
+|+..+-. ..-.+++..|+++|+.++..+-+.
T Consensus 267 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 301 (397)
T 2qde_A 267 LMIKTQKAGGLLKAQRWLTLARLANLPVICGCMVG 301 (397)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSC
T ss_pred EEEeccccCCHHHHHHHHHHHHHcCCeEEEecCcc
Confidence 66655432 222578999999999999986554
No 69
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=75.32 E-value=28 Score=30.47 Aligned_cols=154 Identities=8% Similarity=0.060 Sum_probs=91.2
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCC----cCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASL----YGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSL 115 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~----Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL 115 (263)
.++++..+.++.+++.|++.|-.=-. .+.-+.--+.++.. .+. -.+++-|....... ++++. ..+.+
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~av-R~a---~G~~~~L~vDaN~~-~~~~~----A~~~~ 214 (386)
T 3fv9_G 144 DTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITAC-LAD---RQPGEWYLADANNG-LTVEH----ALRML 214 (386)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHH-TTT---CCTTCEEEEECTTC-CCHHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHH-HHH---cCCCCeEEEECCCC-CCHHH----HHHHH
Confidence 46788888889999999998864221 11111111223322 111 13455666665322 33333 23345
Q ss_pred HHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCC
Q 024751 116 KTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 116 ~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
+.|. +.+++ ++..|.. .++.+.+++++-.|. ..|=+-++...+.++++...++
T Consensus 215 ~~l~-~~~~i-~iEeP~~-----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d- 268 (386)
T 3fv9_G 215 SLLP-PGLDI-VLEAPCA-----------------------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCD- 268 (386)
T ss_dssp HHSC-SSCCC-EEECCCS-----------------------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCS-
T ss_pred HHhh-ccCCc-EEecCCC-----------------------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC-
Confidence 5563 34567 7776621 245677777664443 3455668899999999876655
Q ss_pred eeeccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 195 TVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 195 ~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|+...-+ ..-..+...|+++|+.++..+.+.+
T Consensus 269 -~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 269 -GVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp -EEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred -EEEECccccCCHHHHHHHHHHHHHcCCEEEeCCCCCC
Confidence 676665433 2235799999999999997766543
No 70
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=74.31 E-value=43 Score=29.11 Aligned_cols=152 Identities=11% Similarity=0.059 Sum_probs=91.8
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCc-CCH-HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHh
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLY-GTE-RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTL 118 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Y-gse-~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~L 118 (263)
+.++..+....+.+.|++.|..--.- ..+ ..+=+++++.+ .+++-|..+.. ..++.+...+-++. |+.+
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avr~a~-------g~d~~l~vDan-~~~~~~~a~~~~~~-l~~~ 234 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEIANLRQVL-------GPQAKIAADMH-WNQTPERALELIAE-MQPF 234 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH-------CTTSEEEEECC-SCSCHHHHHHHHHH-HGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHHHHHHHHh-------CCCCEEEEECC-CCCCHHHHHHHHHH-Hhhc
Confidence 57777888888999999988742111 111 22233444431 23455555653 33455665555544 7777
Q ss_pred CCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCeee
Q 024751 119 QIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPTVN 197 (263)
Q Consensus 119 g~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~~ 197 (263)
+++++ ..|.. ...|+.+.++++.-.|--++- +-++.+.++++++....+ ++
T Consensus 235 ~i~~i-----EqP~~---------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~v 286 (388)
T 2nql_A 235 DPWFA-----EAPVW---------------------TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIA--IV 286 (388)
T ss_dssp CCSCE-----ECCSC---------------------TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCS--EE
T ss_pred CCCEE-----ECCCC---------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCC--EE
Confidence 76654 34421 123667788887655554443 345788999999876655 66
Q ss_pred ccccCC--CCCcHHHHHHHHhCCceEEEccCCCC
Q 024751 198 QVEMNP--AWQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 198 q~~~~~--~~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
|+..+- +..-.++...|+++|+.++..+-+.+
T Consensus 287 ~ik~~~GGit~~~~i~~~A~~~g~~~~~h~~~es 320 (388)
T 2nql_A 287 QPEMGHKGITNFIRIGALAAEHGIDVIPHATVGA 320 (388)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHTCEECCCCCSSC
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCeEEeecCCCc
Confidence 655443 11125788999999999998755543
No 71
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=73.20 E-value=47 Score=28.96 Aligned_cols=151 Identities=13% Similarity=0.054 Sum_probs=90.9
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
++++..+..+.+++.|++.|-.=-... .+...=+++|+. - +++-|...... .++++...+ +-+.|+.
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-------~-~~~~l~vDan~-~~~~~~A~~-~~~~L~~ 217 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARD-------F-PEFRVRVDYNQ-GLEIDEAVP-RVLDVAQ 217 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHH-------C-TTSEEEEECTT-CCCGGGHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHh-------C-CCCeEEEECCC-CCCHHHHHH-HHHHHHh
Confidence 566667777888899999886432221 123334556655 3 45556656532 234444433 3345566
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~ 196 (263)
+++.+ +..|... +.++.+.+++++-.|. ..|=+-++.+.+.++++...++ +
T Consensus 218 ~~i~~-----iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d--~ 269 (385)
T 3i6e_A 218 FQPDF-----IEQPVRA---------------------HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICD--G 269 (385)
T ss_dssp TCCSC-----EECCSCT---------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCS--E
T ss_pred cCCCE-----EECCCCc---------------------ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCC--E
Confidence 66544 4455221 1256778887764443 3445668899999999887655 6
Q ss_pred eccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 197 NQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 197 ~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
+|+...-+ ..-..+...|+++|+.++..+.+.+
T Consensus 270 v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (385)
T 3i6e_A 270 VSIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEA 305 (385)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCEEEeCCCCcc
Confidence 66665432 2235799999999999987665543
No 72
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=72.61 E-value=46 Score=28.60 Aligned_cols=150 Identities=17% Similarity=0.182 Sum_probs=91.8
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHh
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTL 118 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~L 118 (263)
++++..+..+.+++.|++.|-.=-.-. .+...=+++|+.+ .+++-|...... .++++... +.++.|
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~~~d~~~v~avR~a~-------g~~~~l~vDan~-~~~~~~a~----~~~~~L 206 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREAV-------GFDIKLRLDANQ-AWTPKDAV----KAIQAL 206 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-------CTTSEEEEECTT-CSCHHHHH----HHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHHHHHc-------CCCCeEEEECCC-CCCHHHHH----HHHHHH
Confidence 577778888888999999886432211 2233345555542 234555555532 23443332 233444
Q ss_pred CCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeee
Q 024751 119 QIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVN 197 (263)
Q Consensus 119 g~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 197 (263)
. ..++.++..|... +.++.+.+++++-.|- ..|=+-++.+.+.++++....+ ++
T Consensus 207 ~--~~~i~~iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d--~v 261 (354)
T 3jva_A 207 A--DYQIELVEQPVKR---------------------RDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVD--VI 261 (354)
T ss_dssp T--TSCEEEEECCSCT---------------------TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCS--EE
T ss_pred H--hcCCCEEECCCCh---------------------hhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCC--EE
Confidence 3 3567777776321 1255677777654443 3334567899999999877655 66
Q ss_pred ccccCCC---CCcHHHHHHHHhCCceEEEccCC
Q 024751 198 QVEMNPA---WQQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 198 q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl 227 (263)
|+..+-+ ..-.++...|+++|+.++..+.+
T Consensus 262 ~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 262 NIKLMKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred EECchhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 6655432 12257999999999999988887
No 73
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=72.15 E-value=38 Score=29.96 Aligned_cols=149 Identities=18% Similarity=0.166 Sum_probs=90.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcC---------CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYG---------TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPA 110 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---------se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~ 110 (263)
.++++..+..+.+++.|++.|..--.++ .....=+++|+.+ .+++-|...... ..+.+...+-
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReav-------G~d~~L~vDaN~-~~~~~~Ai~~ 249 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVI-------GYDNDLMLECYM-GWNLDYAKRM 249 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHH-------CSSSEEEEECTT-CSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHc-------CCCCeEEEECCC-CCCHHHHHHH
Confidence 3678888888999999999987643332 1112234455442 234555556532 3344444332
Q ss_pred HHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHh
Q 024751 111 LKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAF 189 (263)
Q Consensus 111 ~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~ 189 (263)
-+.|+.++++ ++..|.+. +.++.+.++++.-.|. ..|=+-++.+.+.++++.
T Consensus 250 -~~~Le~~~i~-----~iEeP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~ 302 (412)
T 3stp_A 250 -LPKLAPYEPR-----WLEEPVIA---------------------DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINR 302 (412)
T ss_dssp -HHHHGGGCCS-----EEECCSCT---------------------TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHT
T ss_pred -HHHHHhcCCC-----EEECCCCc---------------------ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHc
Confidence 2345665544 45555321 1256778888775554 334456789999999987
Q ss_pred CCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEEcc
Q 024751 190 ATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 190 ~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~s 225 (263)
..++ ++|+...-+ ..-..+...|+++|+.++..+
T Consensus 303 ~a~D--~v~ik~~~~GGit~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 303 KAVS--VLQYDTNRVGGITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp TCCS--EECCCHHHHTHHHHHHHHHHHHHHHTCCBCCSS
T ss_pred CCCC--EEecChhhcCCHHHHHHHHHHHHHcCCEEEecc
Confidence 6655 676665432 122578999999999998766
No 74
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=71.73 E-value=49 Score=28.61 Aligned_cols=150 Identities=11% Similarity=0.009 Sum_probs=89.3
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQI 120 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~ 120 (263)
++++..+....+.+.|++.|..--..++-+..-+.++...+ . -.+++-|..+.. ..++.+. ..+.++.|.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~-a---~g~~~~l~vDan-~~~~~~~----a~~~~~~l~- 214 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISA-G---LPDGHRVTFDVN-RAWTPAI----AVEVLNSVR- 214 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHH-S---CCTTCEEEEECT-TCCCHHH----HHHHHTSCC-
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHH-H---hCCCCEEEEeCC-CCCCHHH----HHHHHHHhC-
Confidence 56777788888899999998753222132222233333211 1 133455666653 2333332 233445553
Q ss_pred CcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCeeecc
Q 024751 121 EYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPTVNQV 199 (263)
Q Consensus 121 ~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~ 199 (263)
.++ ++..|. . .|+.+.++++.-.|--++- +-++.+.++++++....+ ++|+
T Consensus 215 --~~i-~iEqP~----------------------~-d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~v~i 266 (378)
T 2qdd_A 215 --ARD-WIEQPC----------------------Q-TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACE--GVKI 266 (378)
T ss_dssp --CCC-EEECCS----------------------S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCS--EEEE
T ss_pred --CCc-EEEcCC----------------------C-CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCC--EEEe
Confidence 466 666552 1 4667888877655543333 346788999999887665 6666
Q ss_pred ccCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 200 EMNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 200 ~~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
..+.+ ..-.++...|+++|+.++..+-+.
T Consensus 267 k~~~~GGi~~~~~i~~~A~~~g~~~~~~~~~e 298 (378)
T 2qdd_A 267 KPNRVGGLTRARQIRDFGVSVGWQMHIEDVGG 298 (378)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHTCEEEECCSSC
T ss_pred cccccCCHHHHHHHHHHHHHcCCeEEecCCCC
Confidence 55432 222578999999999999986544
No 75
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=71.68 E-value=29 Score=29.53 Aligned_cols=113 Identities=12% Similarity=0.095 Sum_probs=73.2
Q ss_pred HhCCCcccEEEee-cCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc-CCccEEEe-cC----CCHHHHHHHHHh
Q 024751 117 TLQIEYVDLYLIH-WPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH-GLTKSIGV-SN----FSPKKIETILAF 189 (263)
Q Consensus 117 ~Lg~~~iDl~~lh-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGv-s~----~~~~~l~~~~~~ 189 (263)
..|.|.||+-.-. +|... ..+.++.++.++.+++. +.. |-| -+ ++++.+++.++.
T Consensus 85 ~~GAdiIDIg~~StrP~~~----------------~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~~V~eaal~a 146 (310)
T 2h9a_B 85 EYGADIVALRLVSAHPDGQ----------------NRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDAEIFPVIGEA 146 (310)
T ss_dssp HTTCSEEEEECGGGCTTTT----------------CCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHHHHHHHHHHH
T ss_pred HcCCcEEEEeCccCCCCCC----------------CCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCHHHHHHHHHh
Confidence 7788888887742 23221 12256666777777765 433 555 55 778899999998
Q ss_pred CC-CCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhCCCchhhc
Q 024751 190 AT-IPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQGETEREL 260 (263)
Q Consensus 190 ~~-~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~t~~~~~ 260 (263)
+. -++.+|-+.- . ...++++.|.++|..++.+.+.. +-.-..+.+.|.++|+.++.++
T Consensus 147 ga~~k~iINdvs~--~-~~~~~~~~aa~~g~~vv~m~~~d----------v~~l~~~~~~a~~~Gi~~e~Ii 205 (310)
T 2h9a_B 147 LSGRNCLLSSATK--D-NYKPIVATCMVHGHSVVASAPLD----------INLSKQLNIMIMEMNLAPNRII 205 (310)
T ss_dssp TTTSCCEEEEECT--T-THHHHHHHHHHHTCEEEEECSSC----------HHHHHHHHHHHHTTTCCGGGEE
T ss_pred CCCCCCEEEECCC--C-ccHHHHHHHHHhCCCEEEEChhH----------HHHHHHHHHHHHHCCCChhhEE
Confidence 65 3666764433 2 34689999999999999987631 0011235566667787776654
No 76
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=71.65 E-value=51 Score=28.72 Aligned_cols=150 Identities=11% Similarity=0.086 Sum_probs=91.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcCCHH---HHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYGTER---ALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~---~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
.++++..+....+.+.|++.|..-....+-+ .+=+++|+.+ | +++-|..+.. ..++.+...+-++. |+
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~~-l~ 218 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIV--G-----DELPLMLDLA-VPEDLDQTKSFLKE-VS 218 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHH--C-----SSSCEEEECC-CCSCHHHHHHHHHH-HG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHh--C-----CCCEEEEEcC-CCCCHHHHHHHHHH-HH
Confidence 4677778888889999999887432222212 2223444431 2 2344555553 23455655555444 77
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~ 195 (263)
.+++++ +..|.+ ...|+.+.++++.-.|--++- +-++.+.++++++....+
T Consensus 219 ~~~i~~-----iEqP~~---------------------~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d-- 270 (391)
T 2qgy_A 219 SFNPYW-----IEEPVD---------------------GENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAAD-- 270 (391)
T ss_dssp GGCCSE-----EECSSC---------------------TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS--
T ss_pred hcCCCe-----EeCCCC---------------------hhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCC--
Confidence 777654 444421 122567777776655543433 446789999999876655
Q ss_pred eeccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 196 VNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 196 ~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
++|+..+-+- .-.++...|+++|+.++..+.
T Consensus 271 ~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 271 IFNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp EECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred EEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 6777665432 225789999999999998875
No 77
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=71.38 E-value=40 Score=29.89 Aligned_cols=148 Identities=13% Similarity=0.142 Sum_probs=87.4
Q ss_pred CCh-HHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 40 IDE-SAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 40 ~~~-~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
.++ ++..+....+.+.|++.|..--... ....+=+++++.+ .+++.|..... ..++.+...+-++. |+
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v~avR~av-------G~d~~l~vDan-~~~~~~eai~~~~~-L~ 253 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGDAARVDIERVRHVRKVL-------GDEVDILTDAN-TAYTMADARRVLPV-LA 253 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCCCHHHHHHHHHH-HH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHhc-------CCCCEEEEECC-CCCCHHHHHHHHHH-HH
Confidence 356 7777788888999999886421111 1122224455432 23445555542 34456666555544 77
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCC-ccEE-EecCCCHHHHHHHHHhCCCCC
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGL-TKSI-GVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~-ir~i-Gvs~~~~~~l~~~~~~~~~~~ 194 (263)
.++++++ ..|.. .+.++.+.++++.-. |--+ +=+-++.+.++++++....+
T Consensus 254 ~~~i~~i-----EqP~~---------------------~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d- 306 (428)
T 3bjs_A 254 EIQAGWL-----EEPFA---------------------CNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQ- 306 (428)
T ss_dssp HTTCSCE-----ECCSC---------------------TTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEE-
T ss_pred hcCCCEE-----ECCCC---------------------ccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCC-
Confidence 7776643 44421 112567777776543 4333 33456788899998765433
Q ss_pred eeeccccCCCC---CcHHHHHHHHhCCceEEEc
Q 024751 195 TVNQVEMNPAW---QQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 195 ~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~ 224 (263)
++|+..+-.- .-.+++..|+++|+.++..
T Consensus 307 -~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 307 -VWQPDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp -EECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred -EEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 6776665432 2257899999999998887
No 78
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=70.83 E-value=53 Score=28.64 Aligned_cols=150 Identities=13% Similarity=0.103 Sum_probs=90.0
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCC----CcCC-----------H---H---HHHHHHHHHHhcCCCCCCccEEEeeCCCC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTAS----LYGT-----------E---R---ALGEAIAEALKLGLVASREELFITTKLWC 99 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~----~Ygs-----------e---~---~lG~al~~~~~~~~~~~R~~~~I~tK~~~ 99 (263)
+.++..+....+.+.|++.|..-. .+|. + + ..=+++++.+ .+++.|.....
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~av-------G~d~~l~vDan- 217 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAV-------GPDVDIIVENH- 217 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHH-------CTTSEEEEECT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHh-------CCCCeEEEECC-
Confidence 677788888889999999887532 1221 1 1 1222333321 23455665653
Q ss_pred CCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCC
Q 024751 100 SDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNF 178 (263)
Q Consensus 100 ~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~ 178 (263)
..++++...+-++. |+.+ ++.++..|... +.|+.+.++++.-.|--++- +-+
T Consensus 218 ~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~ 270 (403)
T 2ox4_A 218 GHTDLVSAIQFAKA-IEEF-----NIFFYEEINTP---------------------LNPRLLKEAKKKIDIPLASGERIY 270 (403)
T ss_dssp TCSCHHHHHHHHHH-HGGG-----CEEEEECCSCT---------------------TSTHHHHHHHHTCCSCEEECTTCC
T ss_pred CCCCHHHHHHHHHH-HHhh-----CCCEEeCCCCh---------------------hhHHHHHHHHHhCCCCEEecCCcC
Confidence 33455555444443 5554 45566666321 22567777777655554443 335
Q ss_pred CHHHHHHHHHhCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEEccCC
Q 024751 179 SPKKIETILAFATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 179 ~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl 227 (263)
+.+.++++++....+ ++|+..+-+ ..-.+++..|+++|+.++..+..
T Consensus 271 ~~~~~~~~i~~~~~d--~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 271 SRWGFLPFLEDRSID--VIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp HHHHHHHHHHTTCCS--EECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CHHHHHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 678899999876655 666654432 12257899999999999987774
No 79
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=69.34 E-value=57 Score=28.38 Aligned_cols=147 Identities=10% Similarity=0.038 Sum_probs=86.6
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
+.++..+....+.+.|++.|..--.-++ ...+=+++++.+ .+++.|..... ..++.+...+-++. |+.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~~~-l~~ 235 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI-------GKDAQLAVDAN-GRFNLETGIAYAKM-LRD 235 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH-------TTTCEEEEECT-TCCCHHHHHHHHHH-HTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc-------CCCCeEEEECC-CCCCHHHHHHHHHH-HHH
Confidence 5777778888889999998864222222 222233444431 23445555543 23455555444433 555
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHhC----CC
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIG-VSNFSPKKIETILAFA----TI 192 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~----~~ 192 (263)
++++ ++..|.. .+.++.+.++++.-.|--.+ =+-++.+.++++++.. ..
T Consensus 236 ~~i~-----~iEqP~~---------------------~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~ 289 (392)
T 1tzz_A 236 YPLF-----WYEEVGD---------------------PLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDR 289 (392)
T ss_dssp SCCS-----EEECCSC---------------------TTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTT
T ss_pred cCCC-----eecCCCC---------------------hhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCC
Confidence 5544 4555521 12356777777665554333 2446789999999987 43
Q ss_pred CCeeeccccCCCC---CcHHHHHHHHhCCce---EEEc
Q 024751 193 PPTVNQVEMNPAW---QQRKLVEFCKSKSII---VTAF 224 (263)
Q Consensus 193 ~~~~~q~~~~~~~---~~~~~i~~~~~~gi~---v~a~ 224 (263)
+ ++|+..+-+- .-.+++..|+++|+. ++..
T Consensus 290 d--~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 290 D--WLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp C--EECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCCS
T ss_pred c--EEEECccccCCHHHHHHHHHHHHHCCCCCceEeec
Confidence 3 6666654432 225799999999999 7776
No 80
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=68.85 E-value=58 Score=28.29 Aligned_cols=152 Identities=13% Similarity=0.131 Sum_probs=90.2
Q ss_pred ChHHHHHHHHHHHHc-CCcEEeCCCCc-C--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKL-GYRHFDTASLY-G--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Y-g--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
++++..+....+++. |++.|-.=-.- . .+...=+++|+. -.+++-|...... .++.+...+ +-+.|+
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-------~g~~~~l~vDan~-~~~~~~A~~-~~~~l~ 218 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELARE-------VGDRVSLRIDINA-RWDRRTALH-YLPILA 218 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHT-------TTTTSEEEEECTT-CSCHHHHHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHH-------cCCCCEEEEECCC-CCCHHHHHH-HHHHHH
Confidence 567777777888887 99988643221 1 122233455543 2345556666532 334444332 334566
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~ 195 (263)
.+++++ +..|... ..++.+.++++.-.|. ..|=+-++.+++.++++....+
T Consensus 219 ~~~i~~-----iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d-- 270 (383)
T 3i4k_A 219 EAGVEL-----FEQPTPA---------------------DDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAAD-- 270 (383)
T ss_dssp HTTCCE-----EESCSCT---------------------TCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCS--
T ss_pred hcCCCE-----EECCCCh---------------------hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCC--
Confidence 666544 4455221 1245566666543332 3344567899999999887665
Q ss_pred eeccccCCCC---CcHHHHHHHHhCCceEEEccCCCC
Q 024751 196 VNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 196 ~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|+....+- .-..+...|+++|+.++..+.+.+
T Consensus 271 ~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 307 (383)
T 3i4k_A 271 VIALKTTKHGGLLESKKIAAIAEAGGLACHGATSLEG 307 (383)
T ss_dssp EEEECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCC
T ss_pred EEEEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCcc
Confidence 7777765442 225789999999999987766543
No 81
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=68.56 E-value=60 Score=28.31 Aligned_cols=149 Identities=10% Similarity=0.067 Sum_probs=90.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
.++++..+..+.+++.|++.|..=-... .....=+++|+.+ .+++-|..+.. ...+.+...+ +-+.|+.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~-------g~d~~l~vDan-~~~~~~~A~~-~~~~l~~ 220 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRV-------GADVEILVDAN-QSLGRHDALA-MLRILDE 220 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCCCHHHHHH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHc-------CCCceEEEECC-CCcCHHHHHH-HHHHHHh
Confidence 4678888889999999999997532211 1222334555542 23455555553 2344444333 2345666
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHH-HcCCccEE-EecCCCHHHHHHHHHhCCCCCe
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQ-RHGLTKSI-GVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~ 195 (263)
+++++ +..|.+. +.++.+.+++ +.-.|--. |=+-++.+.+.++++...++
T Consensus 221 ~~i~~-----iEqP~~~---------------------~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d-- 272 (389)
T 3ozy_A 221 AGCYW-----FEEPLSI---------------------DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAID-- 272 (389)
T ss_dssp TTCSE-----EESCSCT---------------------TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCS--
T ss_pred cCCCE-----EECCCCc---------------------ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCC--
Confidence 66544 4555211 1255677777 65444322 23446688899999876655
Q ss_pred eeccccCCCC---CcHHHHHHHHhCCceEEEcc
Q 024751 196 VNQVEMNPAW---QQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 196 ~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~s 225 (263)
++|+....+- .-..+...|+++|+.++..+
T Consensus 273 ~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 273 VLQADASRAGGITEALAISASAASAHLAWNPHT 305 (389)
T ss_dssp EECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 7777765542 22579999999999998875
No 82
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=67.87 E-value=34 Score=29.45 Aligned_cols=152 Identities=13% Similarity=0.125 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHh
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTL 118 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~L 118 (263)
++++..+..+.+++.|++.|..=-... .+...=+++|+.+ .+++-|...... .++++...+ +-+.|+.+
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~~~~d~~~v~avR~~~-------g~~~~l~vDan~-~~~~~~a~~-~~~~l~~~ 210 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGDEEQDFERLRRLHETL-------AGRAVVRVDPNQ-SYDRDGLLR-LDRLVQEL 210 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH-------TTSSEEEEECTT-CCCHHHHHH-HHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHHh-------CCCCEEEEeCCC-CCCHHHHHH-HHHHHHhc
Confidence 577788888889999999886532211 2223334555542 234455555532 334444332 33456666
Q ss_pred CCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhC-CCCCee
Q 024751 119 QIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFA-TIPPTV 196 (263)
Q Consensus 119 g~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~-~~~~~~ 196 (263)
+++++ ..|.+. +.++.+.+++++-.|- ..|=+-++.+++.++++.. ..+ +
T Consensus 211 ~i~~i-----EqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d--~ 262 (356)
T 3ro6_B 211 GIEFI-----EQPFPA---------------------GRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACG--I 262 (356)
T ss_dssp TCCCE-----ECCSCT---------------------TCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCS--E
T ss_pred CCCEE-----ECCCCC---------------------CcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCC--E
Confidence 65554 444211 1234555554432232 3344567888899988765 544 6
Q ss_pred eccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 197 NQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 197 ~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
+|+..+-+ ..-.++...|+++|+.++..+.+.+
T Consensus 263 v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es 298 (356)
T 3ro6_B 263 FNIKLMKCGGLAPARRIATIAETAGIDLMWGCMDES 298 (356)
T ss_dssp EEECHHHHCSHHHHHHHHHHHHHHTCEEEECCCSCC
T ss_pred EEEcccccCCHHHHHHHHHHHHHcCCEEEecCCccc
Confidence 66665432 1235789999999999998776643
No 83
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=67.73 E-value=61 Score=28.14 Aligned_cols=151 Identities=15% Similarity=0.116 Sum_probs=89.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCC------------cC--CHHH------HHHHHHHHHhcCCCCCCccEEEeeCCCC
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASL------------YG--TERA------LGEAIAEALKLGLVASREELFITTKLWC 99 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~------------Yg--se~~------lG~al~~~~~~~~~~~R~~~~I~tK~~~ 99 (263)
.++++..+....+.+.|++.|..-.. || .+.. +=+++++.+ .+++-|.....
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~-------G~d~~l~vD~n- 207 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAA-------GPEIELMVDLS- 207 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHH-------CTTSEEEEECT-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhc-------CCCCEEEEECC-
Confidence 46777778888899999998864322 33 1111 122333321 23455555553
Q ss_pred CCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEe-cCC
Q 024751 100 SDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGV-SNF 178 (263)
Q Consensus 100 ~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~ 178 (263)
..++++...+-++. |+.+ ++.++..|... +.++.+.++++.-.|--++- +-+
T Consensus 208 ~~~~~~~a~~~~~~-l~~~-----~i~~iE~P~~~---------------------~~~~~~~~l~~~~~ipIa~dE~~~ 260 (392)
T 2poz_A 208 GGLTTDETIRFCRK-IGEL-----DICFVEEPCDP---------------------FDNGALKVISEQIPLPIAVGERVY 260 (392)
T ss_dssp TCSCHHHHHHHHHH-HGGG-----CEEEEECCSCT---------------------TCHHHHHHHHHHCSSCEEECTTCC
T ss_pred CCCCHHHHHHHHHH-HHhc-----CCCEEECCCCc---------------------ccHHHHHHHHhhCCCCEEecCCcC
Confidence 23455554444433 5554 45566666321 12567777776655554443 335
Q ss_pred CHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 179 SPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 179 ~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
+.+.++++++....+ ++|+..+-+- .-.++...|+++|+.++..+..
T Consensus 261 ~~~~~~~~i~~~~~d--~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 261 TRFGFRKIFELQACG--IIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHHHHHTTTCCS--EECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred CHHHHHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 678889988766555 6777665432 2257999999999999987765
No 84
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=67.38 E-value=62 Score=28.03 Aligned_cols=151 Identities=11% Similarity=0.046 Sum_probs=86.8
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
++++..+..+.+++.|++.|-.=-.-. .+...=+++|+.+ .+++-|...... .++.+...+ +-+.|+.
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~-------g~~~~l~vDan~-~~~~~~A~~-~~~~l~~ 216 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEF-------GERIDLRLDFNQ-ALTPFGAMK-ILRDVDA 216 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHH-------GGGSEEEEECTT-CCCTTTHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHh-------CCCCeEEEeCCC-CcCHHHHHH-HHHHHhh
Confidence 456666777888888999886432221 1233334556542 234455555422 223333322 3345566
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~ 196 (263)
+++++ +..|.+. +.++.+.+++++-.|. ..|=+-++..++.++++....+ +
T Consensus 217 ~~i~~-----iEqP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~ 268 (377)
T 3my9_A 217 FRPTF-----IEQPVPR---------------------RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAAD--A 268 (377)
T ss_dssp TCCSC-----EECCSCT---------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCS--E
T ss_pred cCCCE-----EECCCCc---------------------cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCC--E
Confidence 66544 3445211 1255677777654443 3344567899999999877655 6
Q ss_pred eccccCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 197 NQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 197 ~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
+|+..+-+ ..-..+...|+++|+.++..+.+.
T Consensus 269 v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~e 303 (377)
T 3my9_A 269 ISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWE 303 (377)
T ss_dssp EECCHHHHTSHHHHHHHHHHHHHHTCCEECCEECC
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCeEecCCCCC
Confidence 66655432 123578999999999997655443
No 85
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=67.22 E-value=60 Score=27.86 Aligned_cols=150 Identities=15% Similarity=0.152 Sum_probs=87.0
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQI 120 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~ 120 (263)
+.++..+....+.+.|++.|..--.-.....+=+++++.+ | + ++.|..... ..++.+. .+-++ .|+.+++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~e~v~avr~~~--g---~--~~~l~vDan-~~~~~~~-~~~~~-~l~~~~i 210 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKIEPGWDVEPVRAVRERF--G---D--DVLLQVDAN-TAYTLGD-APQLA-RLDPFGL 210 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECBTTBSHHHHHHHHHHH--C---T--TSEEEEECT-TCCCGGG-HHHHH-TTGGGCC
T ss_pred CHHHHHHHHHHHHHhCccEEEEecCchhHHHHHHHHHHhc--C---C--CceEEEecc-CCCCHHH-HHHHH-HHHhcCC
Confidence 5677778888889999998764211112222334555542 2 2 233433332 3345566 44433 3666665
Q ss_pred CcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHHhCCCCCeeecc
Q 024751 121 EYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSI-GVSNFSPKKIETILAFATIPPTVNQV 199 (263)
Q Consensus 121 ~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~ 199 (263)
+ ++..|.+ ...++.+.++++.-.|--. |=+-++.+.+.++++....+ ++|+
T Consensus 211 ~-----~iE~P~~---------------------~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~v~i 262 (368)
T 1sjd_A 211 L-----LIEQPLE---------------------EEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQ--IVNI 262 (368)
T ss_dssp S-----EEECCSC---------------------TTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCS--EEEE
T ss_pred C-----eEeCCCC---------------------hhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCC--EEEe
Confidence 4 4455521 1235677777766444333 33456789999999876655 6776
Q ss_pred ccCCCC---CcHHHHHHHHhCCceEEEccCCC
Q 024751 200 EMNPAW---QQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 200 ~~~~~~---~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
..+-+- .-.++...|+++|+.++...-+.
T Consensus 263 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 294 (368)
T 1sjd_A 263 KPGRVGGYLEARRVHDVCAAHGIPVWCGGMIE 294 (368)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECCCCC
T ss_pred cccccCCHHHHHHHHHHHHHcCCcEEeCCccc
Confidence 665432 23579999999999965544443
No 86
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=67.14 E-value=63 Score=28.08 Aligned_cols=154 Identities=9% Similarity=0.075 Sum_probs=91.8
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHh
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTL 118 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~L 118 (263)
++++..+..+.+++.|++.|-.=-... .+...=+++|+. -.+++-|...... .++++...+- -+.|+..
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a-------~g~~~~L~vDaN~-~w~~~~A~~~-~~~l~~~ 212 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNE-------FSKNIKFRFDANQ-GWNLAQTKQF-IEEINKY 212 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHH-------CCTTSEEEEECTT-CCCHHHHHHH-HHHHHTS
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHh-------cCCCCeEEEeCCC-CcCHHHHHHH-HHHHhhc
Confidence 577788888888999999886432222 122333455554 2334445555422 2344433222 2233331
Q ss_pred CCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeee
Q 024751 119 QIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVN 197 (263)
Q Consensus 119 g~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 197 (263)
+ .++.++..|... +-++.+.++++.-.|- ..|=+-++..++.++++...++ ++
T Consensus 213 ~---~~l~~iEeP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~v 266 (379)
T 3r0u_A 213 S---LNVEIIEQPVKY---------------------YDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACN--MI 266 (379)
T ss_dssp C---CCEEEEECCSCT---------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCS--EE
T ss_pred C---CCcEEEECCCCc---------------------ccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCC--EE
Confidence 1 567778877321 1245677777653332 4455678899999999876655 66
Q ss_pred ccccCCCC---CcHHHHHHHHhCCceEEEccCCCC
Q 024751 198 QVEMNPAW---QQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 198 q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
|+...-+- .-..+...|+++|+.++..+.+.+
T Consensus 267 ~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~~es 301 (379)
T 3r0u_A 267 NIKLAKTGGILEAQKIKKLADSAGISCMVGCMMES 301 (379)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred EECccccCCHHHHHHHHHHHHHcCCEEEEeCCCcc
Confidence 66554321 235799999999999998877654
No 87
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=66.62 E-value=18 Score=29.83 Aligned_cols=162 Identities=14% Similarity=0.046 Sum_probs=87.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcC------CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC-CCChhHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYG------TERALGEAIAEALKLGLVASREELFITTKLWCS-DAHRDLVVPALK 112 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg------se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~-~~~~~~i~~~~~ 112 (263)
.+.+++.++++.|.+.|++.+=.++++. +...+-+.+.+..+...- ...++.| ..+.. ...+ .+...++
T Consensus 17 ~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~-~~~~i~I--~~G~Ev~~~~-~~~~~l~ 92 (262)
T 3qy7_A 17 GDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIK-EDIPLHV--LPGQEIRIYG-EVEQDLA 92 (262)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHH-TTCCCEE--ECCCEEECCT-THHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCCCEE--ecCeEEecch-hHHHHHh
Confidence 3568888999999999999999988863 233333333322110000 1112222 22211 2222 2333333
Q ss_pred H-HHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecC------CCHHHHHH
Q 024751 113 K-SLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSN------FSPKKIET 185 (263)
Q Consensus 113 ~-sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~------~~~~~l~~ 185 (263)
+ ++..|+ --|.+++..|.... .....+.+..+.+.|.+--||=-. ...+.+.+
T Consensus 93 ~~~~~~l~--~~~~vl~e~~~~~~------------------~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~ 152 (262)
T 3qy7_A 93 KRQLLSLN--DTKYILIEFPFDHV------------------PRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYH 152 (262)
T ss_dssp TTCSCCGG--GSSEEEEECCTTCC------------------CTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHH
T ss_pred cCCCcEEC--CceEEEEeCCCccC------------------HHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHH
Confidence 3 222232 22556666552211 234567888888999887776321 12345666
Q ss_pred HHHhCCCCCeeeccccCCCCC-----cHHHHHHHHhCCceEEEccCCCC
Q 024751 186 ILAFATIPPTVNQVEMNPAWQ-----QRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 186 ~~~~~~~~~~~~q~~~~~~~~-----~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
+.+.+ . ..|++.+.+.. .......|.++|+.++.-|=..+
T Consensus 153 l~~~G-~---~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSDaH~ 197 (262)
T 3qy7_A 153 LVEKG-A---ASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHN 197 (262)
T ss_dssp HHHTT-C---EEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECCBCS
T ss_pred HHHCC-C---EEEEECCccCcccchHHHHHHHHHHhCCCeEEEEccCCC
Confidence 65543 2 45666544321 24567788889998887766654
No 88
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=66.39 E-value=12 Score=31.44 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHH
Q 024751 106 LVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIET 185 (263)
Q Consensus 106 ~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~ 185 (263)
.-+.++-+.|..+|+++|.+-....+.. .+ . +...|+.+..+.+...++...+. -+.+.+++
T Consensus 26 e~k~~i~~~L~~~Gv~~IE~g~~~~~~~-~p--------------~--~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~ 87 (295)
T 1ydn_A 26 ADKIALINRLSDCGYARIEATSFVSPKW-VP--------------Q--LADSREVMAGIRRADGVRYSVLV-PNMKGYEA 87 (295)
T ss_dssp HHHHHHHHHHTTTTCSEEEEEECSCTTT-CG--------------G--GTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHH
T ss_pred HHHHHHHHHHHHcCcCEEEEccCcCccc-cc--------------c--ccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHH
Confidence 3455566667889988888765433311 01 0 12456666666665566666665 56778888
Q ss_pred HHHhCCCCCeeeccccCC-------C-C------CcHHHHHHHHhCCceEEEc
Q 024751 186 ILAFATIPPTVNQVEMNP-------A-W------QQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 186 ~~~~~~~~~~~~q~~~~~-------~-~------~~~~~i~~~~~~gi~v~a~ 224 (263)
+++. .++.+.+-...|. . . .-.+.+++|+++|+.+.++
T Consensus 88 a~~~-G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~ 139 (295)
T 1ydn_A 88 AAAA-HADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGY 139 (295)
T ss_dssp HHHT-TCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHC-CCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 8774 4443222222220 0 1 1146799999999998743
No 89
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=66.37 E-value=49 Score=29.07 Aligned_cols=146 Identities=13% Similarity=0.083 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHHHc-CCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHh
Q 024751 42 ESAMKSAVLESIKL-GYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTL 118 (263)
Q Consensus 42 ~~~~~~~l~~A~~~-Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~L 118 (263)
+++..+..+.+++. |++.|=.=-... .+...=+++|+. - +++-|..... ..++++...+ +-+.|+.+
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~-------~-~~~~l~vDaN-~~w~~~~A~~-~~~~l~~~ 238 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREA-------L-PGVNLRVDPN-AAWSVPDSVR-AGIALEEL 238 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSCHHHHHHHHHHHHHH-------C-TTSEEEEECT-TCSCHHHHHH-HHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHh-------C-CCCeEEeeCC-CCCCHHHHHH-HHHHHhhc
Confidence 47778888888998 999874322221 223334556655 3 4444554442 2334443332 22344554
Q ss_pred CCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeee
Q 024751 119 QIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVN 197 (263)
Q Consensus 119 g~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 197 (263)
++.++..|. . .++.+.+|++.-.|- +.|=+-++...+.++++...++ ++
T Consensus 239 -----~i~~iEqP~----------------------~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~v 288 (398)
T 4dye_A 239 -----DLEYLEDPC----------------------V-GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVD--VI 288 (398)
T ss_dssp -----CCSEEECCS----------------------S-HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCS--EE
T ss_pred -----CCCEEcCCC----------------------C-CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCC--EE
Confidence 445556551 1 456777777664442 4445667888999999876655 66
Q ss_pred ccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 198 QVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 198 q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
|+...-+- .-..+...|+++|+.++..+..
T Consensus 289 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 321 (398)
T 4dye_A 289 HGDVYKWGGIAATKALAAHCETFGLGMNLHSGG 321 (398)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCEEEECCSC
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 66654322 2357999999999999998743
No 90
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=66.22 E-value=56 Score=27.12 Aligned_cols=131 Identities=11% Similarity=-0.030 Sum_probs=79.1
Q ss_pred hhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc-CCccEEEecCCCHHH
Q 024751 104 RDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH-GLTKSIGVSNFSPKK 182 (263)
Q Consensus 104 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~ 182 (263)
.+.+.+..++.. .-|.+.||+-.-.... ...+.....++.+++. +. -|.|=+++++.
T Consensus 33 ~~~a~~~a~~~v-~~GAdiIDIg~~s~~~-------------------eE~~rv~~vi~~l~~~~~~--pisIDT~~~~v 90 (271)
T 2yci_X 33 PRPIQEWARRQA-EKGAHYLDVNTGPTAD-------------------DPVRVMEWLVKTIQEVVDL--PCCLDSTNPDA 90 (271)
T ss_dssp CHHHHHHHHHHH-HTTCSEEEEECCSCSS-------------------CHHHHHHHHHHHHHHHCCC--CEEEECSCHHH
T ss_pred HHHHHHHHHHHH-HCCCCEEEEcCCcCch-------------------hHHHHHHHHHHHHHHhCCC--eEEEeCCCHHH
Confidence 355555544444 5788888876644210 0145566666666654 32 47778899999
Q ss_pred HHHHHHhCCCCCeeeccccCCCCCc--HHHHHHHHhCCceEEEccCCCCCCCCCCCCC-CCCcHHHHHHHHHhCCCchhh
Q 024751 183 IETILAFATIPPTVNQVEMNPAWQQ--RKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQ-VMNNEALKQIAALQQGETERE 259 (263)
Q Consensus 183 l~~~~~~~~~~~~~~q~~~~~~~~~--~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~-~l~~~~l~~ia~~~~~t~~~~ 259 (263)
+++.++.+.-.+.+|- .|... . .++++.|+++|..++.+..-. +|......+ .-.-....+.|.++|+.++++
T Consensus 91 ~~aal~a~~Ga~iINd--vs~~~-d~~~~~~~~~a~~~~~vv~m~~d~-~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~I 166 (271)
T 2yci_X 91 IEAGLKVHRGHAMINS--TSADQ-WKMDIFFPMAKKYEAAIIGLTMNE-KGVPKDANDRSQLAMELVANADAHGIPMTEL 166 (271)
T ss_dssp HHHHHHHCCSCCEEEE--ECSCH-HHHHHHHHHHHHHTCEEEEESCBT-TBCCCSHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHhCCCCCEEEE--CCCCc-cccHHHHHHHHHcCCCEEEEecCC-CCCCCCHHHHHHHHHHHHHHHHHCCCCcccE
Confidence 9999998543444553 33322 3 579999999999999987532 233211000 001134566777889888776
Q ss_pred c
Q 024751 260 L 260 (263)
Q Consensus 260 ~ 260 (263)
+
T Consensus 167 i 167 (271)
T 2yci_X 167 Y 167 (271)
T ss_dssp E
T ss_pred E
Confidence 4
No 91
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=65.83 E-value=73 Score=28.30 Aligned_cols=150 Identities=11% Similarity=0.117 Sum_probs=90.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCC--C----cC---C------HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCCh
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTAS--L----YG---T------ERALGEAIAEALKLGLVASREELFITTKLWCSDAHR 104 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~--~----Yg---s------e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~ 104 (263)
.++++..+..+.+++.|++.|-.=. . +| . ....=+++|+.+ .+++-|..... ...++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~av-------G~d~~L~vDan-~~~t~ 216 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAV-------GDKADLLFGTH-GQFTT 216 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH-------TTSSEEEECCC-SCBCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHh-------CCCCeEEEeCC-CCCCH
Confidence 3678888899999999999887521 1 22 1 112234455442 23455665653 23344
Q ss_pred hHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHH
Q 024751 105 DLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKI 183 (263)
Q Consensus 105 ~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l 183 (263)
+...+ +-+.|+.+++ .++..|.+. +.++.+.++++.-.|- ..|=+-++.+.+
T Consensus 217 ~~A~~-~~~~Le~~~i-----~~iEeP~~~---------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~ 269 (433)
T 3rcy_A 217 AGAIR-LGQAIEPYSP-----LWYEEPVPP---------------------DNVGAMAQVARAVRIPVATGERLTTKAEF 269 (433)
T ss_dssp HHHHH-HHHHHGGGCC-----SEEECCSCT---------------------TCHHHHHHHHHHSSSCEEECTTCCSHHHH
T ss_pred HHHHH-HHHHhhhcCC-----CEEECCCCh---------------------hhHHHHHHHHhccCCCEEecCCCCCHHHH
Confidence 43332 2344566554 455666321 1245677777764443 344456789999
Q ss_pred HHHHHhCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEEccC
Q 024751 184 ETILAFATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 184 ~~~~~~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~sp 226 (263)
.++++...++ ++|+..+-+ ..-..+...|+++|+.+...++
T Consensus 270 ~~~l~~g~~D--~v~~d~~~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 270 APVLREGAAA--ILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHHHHTTCCS--EECCCHHHHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred HHHHHcCCCC--EEEeCchhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 9999877655 666665432 1225799999999999988874
No 92
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=65.58 E-value=69 Score=27.93 Aligned_cols=149 Identities=15% Similarity=0.122 Sum_probs=89.3
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCC
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQI 120 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~ 120 (263)
++++..+.++.+++.|++.|=.=-..+.+...=+++++. - .++.|..-.. ..++++.... + +.|.
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~~~~d~~~v~avR~~-------~-~~~~l~vDaN-~~~~~~~A~~-~----~~l~- 213 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIAPGRDRAAIKAVRLR-------Y-PDLAIAADAN-GSYRPEDAPV-L----RQLD- 213 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECBTTBSHHHHHHHHHH-------C-TTSEEEEECT-TCCCGGGHHH-H----HHGG-
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHH-------C-CCCeEEEECC-CCCChHHHHH-H----HHHh-
Confidence 478888888999999999763211112233334556655 2 2344444332 2234444432 3 3332
Q ss_pred CcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHhCCCCCeeecc
Q 024751 121 EYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLT-KSIGVSNFSPKKIETILAFATIPPTVNQV 199 (263)
Q Consensus 121 ~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 199 (263)
..++.++..|... +-++.+.+|.+.-.| -+.|=+-++...+.++++...++ ++|+
T Consensus 214 -~~~i~~iEeP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d--~v~~ 269 (388)
T 3qld_A 214 -AYDLQFIEQPLPE---------------------DDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAAR--VLNV 269 (388)
T ss_dssp -GGCCSCEECCSCT---------------------TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCS--EEEE
T ss_pred -hCCCcEEECCCCc---------------------ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCC--EEEE
Confidence 3466677776321 124566777665333 35566778899999999876655 6666
Q ss_pred ccCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 200 EMNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 200 ~~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
..+-+ ..-..+...|+++|+.++..+.+.
T Consensus 270 k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 301 (388)
T 3qld_A 270 KPGRLGGFGATLRALDVAGEAGMAAWVGGMYE 301 (388)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred CchhhCCHHHHHHHHHHHHHCCCeEEecCccc
Confidence 65432 223579999999999998776554
No 93
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=64.53 E-value=73 Score=27.83 Aligned_cols=151 Identities=7% Similarity=0.002 Sum_probs=92.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCc-C--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLY-G--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Y-g--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
.++++..+..+.+++.|++.|-.=-.- . .+...=+++++.+ ..+++-|....... ++++. ..+.++
T Consensus 163 ~~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~------gg~~~~L~vDaN~~-w~~~~----A~~~~~ 231 (391)
T 4e8g_A 163 GQPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERI------RGTGTRLAVDGNRS-LPSRD----ALRLSR 231 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHH------TTTTCEEEEECTTC-CCHHH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHh------CCCCCeEEEeCCCC-CCHHH----HHHHHH
Confidence 367888888889999999988642211 1 1222234454431 11455666665322 33332 233344
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~ 195 (263)
.|. .+++ ++..|. ..++.+.++++.-.|. +.|=+-++...+.++++...++
T Consensus 232 ~L~--~~~i-~iEeP~-----------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d-- 283 (391)
T 4e8g_A 232 ECP--EIPF-VLEQPC-----------------------NTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCD-- 283 (391)
T ss_dssp HCT--TSCE-EEESCS-----------------------SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCS--
T ss_pred HHh--hcCe-EEecCC-----------------------ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCC--
Confidence 553 2477 777661 0245677777664443 4455678899999999876655
Q ss_pred eeccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 196 VNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 196 ~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|+...-+ ..-..+...|+++|+.++..+.+.+
T Consensus 284 ~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 320 (391)
T 4e8g_A 284 GFGMKLTRIGGLQQMAAFRDICEARALPHSCDDAWGG 320 (391)
T ss_dssp EEEEEHHHHTSHHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCeEEeCCcCCC
Confidence 677665432 2235799999999999998877654
No 94
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=64.08 E-value=36 Score=30.54 Aligned_cols=165 Identities=11% Similarity=0.042 Sum_probs=91.2
Q ss_pred CcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCCC-----cccEEEeecCCCCCCCcc
Q 024751 65 LYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQIE-----YVDLYLIHWPMSAKPSEK 139 (263)
Q Consensus 65 ~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~-----~iDl~~lh~p~~~~~~~~ 139 (263)
.||.++.+-++|++..+.- +.+-++|.|-.... -+-..++...+++... .+.++.+|.|......
T Consensus 73 VfGg~~~L~~~I~~~~~~~---~P~~I~V~tTC~~e-----~IGdDi~~v~~~~~~~~~~~~~~pVi~v~tpgf~gs~-- 142 (458)
T 3pdi_B 73 VMGADENVVEALKTICERQ---NPSVIGLLTTGLSE-----TQGCDLHTALHEFRTQYEEYKDVPIVPVNTPDFSGCF-- 142 (458)
T ss_dssp SSCSHHHHHHHHHHHHHHT---CCSEEEEEECHHHH-----TTCTTHHHHHHHTTTSCCSCSCSCEEEECCCTTSSCH--
T ss_pred ccCcHHHHHHHHHHHHHhc---CCCEEEEECCcHHH-----HhcCCHHHHHHHHHHhccccCCCeEEEeeCCCcCCch--
Confidence 4788888888888775543 46667887776321 1112234444444433 4678889988543210
Q ss_pred ccCCCCccccccCCHHHHHHHHHH-HHH---------cCCccEE-EecCCC--HHHHHHHHHhCCCCCeeec--------
Q 024751 140 LRNDIPEEDLVSLDYNGVWEAMEE-CQR---------HGLTKSI-GVSNFS--PKKIETILAFATIPPTVNQ-------- 198 (263)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~-l~~---------~G~ir~i-Gvs~~~--~~~l~~~~~~~~~~~~~~q-------- 198 (263)
..-...++++|-+ +.+ .++|.-| |..++. .++++++++..++++.+..
T Consensus 143 -----------~~G~~~a~~al~~~l~~~~~~~~~~~~~~VNii~G~~~~~~D~~eik~lL~~~Gi~v~~~~d~s~~ld~ 211 (458)
T 3pdi_B 143 -----------ESGFAAAVKAIVETLVPERRDQVGKRPRQVNVLCSANLTPGDLEYIAESIESFGLRPLLIPDLSGSLDG 211 (458)
T ss_dssp -----------HHHHHHHHHHHHHHSSCSSSCTTCCCSSEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEESCHHHHSSS
T ss_pred -----------hHHHHHHHHHHHHHhhccccCcCCCCCCeEEEEeCCCCChHHHHHHHHHHHHcCCEEEEecCccccccC
Confidence 0013334444443 221 2467777 765443 4678888988776654431
Q ss_pred ----cccCCCC---------------------Cc--HHHHHHH-HhCCceEEEc-cCCCCCCCCCCCCCCCCcHHHHHHH
Q 024751 199 ----VEMNPAW---------------------QQ--RKLVEFC-KSKSIIVTAF-SPLGAVGSSWGTNQVMNNEALKQIA 249 (263)
Q Consensus 199 ----~~~~~~~---------------------~~--~~~i~~~-~~~gi~v~a~-spl~~~G~l~~~~~~l~~~~l~~ia 249 (263)
-+|+.+. .+ ....++. ++.|+.++.. .|+|-. -.+..+++||
T Consensus 212 ~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~Le~~~GiP~~~~~~p~G~~---------~T~~~l~~la 282 (458)
T 3pdi_B 212 HLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADALAERTGVPDRRFGMLYGLD---------AVDAWLMALA 282 (458)
T ss_dssp CCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHHHHHHSCCCEEEECCSCHHH---------HHHHHHHHHH
T ss_pred ccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHHHHHHHCCCEEecCCCcCHH---------HHHHHHHHHH
Confidence 1121110 00 2344555 4569999985 577530 1245678888
Q ss_pred HHhCCCchhh
Q 024751 250 ALQQGETERE 259 (263)
Q Consensus 250 ~~~~~t~~~~ 259 (263)
+..|+..++.
T Consensus 283 ~~~g~~~~~~ 292 (458)
T 3pdi_B 283 EISGNPVPDR 292 (458)
T ss_dssp HHHSSCCCHH
T ss_pred HHHCCchHHH
Confidence 8888765544
No 95
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=63.70 E-value=72 Score=27.51 Aligned_cols=148 Identities=11% Similarity=0.053 Sum_probs=88.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEeC--CCC-cC---CHH---HHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDT--ASL-YG---TER---ALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPA 110 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~Dt--A~~-Yg---se~---~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~ 110 (263)
.++++..+..+.+.+.|++.|.. +.. |+ .-+ .+=+++++.+ .+++-|..+.. ..++++...+-
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~-------g~d~~l~vDan-~~~~~~~a~~~ 219 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV-------GPDIRLMIDAF-HWYSRTDALAL 219 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH-------CTTSEEEEECC-TTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh-------CCCCeEEEECC-CCCCHHHHHHH
Confidence 35777788888889999998864 221 21 111 2224444431 23455555653 23455555444
Q ss_pred HHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEE-ecCCC-HHHHHHHHH
Q 024751 111 LKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIG-VSNFS-PKKIETILA 188 (263)
Q Consensus 111 ~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~-~~~l~~~~~ 188 (263)
++ .|+.++++ ++..|.. ...++.+.++++.-.|--++ =+-++ .+.++++++
T Consensus 220 ~~-~l~~~~i~-----~iE~P~~---------------------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~ 272 (382)
T 1rvk_A 220 GR-GLEKLGFD-----WIEEPMD---------------------EQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIK 272 (382)
T ss_dssp HH-HHHTTTCS-----EEECCSC---------------------TTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHH
T ss_pred HH-HHHhcCCC-----EEeCCCC---------------------hhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHH
Confidence 43 56666654 4455521 11256677777654454333 34567 889999998
Q ss_pred hCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEEc
Q 024751 189 FATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 189 ~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~ 224 (263)
....+ ++|+..+-+ ..-.++...|+++|+.++..
T Consensus 273 ~~~~d--~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 273 AGACD--ILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp TTCCS--EEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCCC--EEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 77655 666654432 22357899999999999988
No 96
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=62.95 E-value=69 Score=27.68 Aligned_cols=148 Identities=15% Similarity=0.138 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHcCCcEEeCCCC-cC-C---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCC-hhHHHHHHHHHH
Q 024751 42 ESAMKSAVLESIKLGYRHFDTASL-YG-T---ERALGEAIAEALKLGLVASREELFITTKLWCSDAH-RDLVVPALKKSL 115 (263)
Q Consensus 42 ~~~~~~~l~~A~~~Gi~~~DtA~~-Yg-s---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~-~~~i~~~~~~sL 115 (263)
+++..+..+.+++.|++.|..--. +| + ....=+++|+.+ .+++-|...... .++ ++...+ +-+.|
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~-------g~~~~l~vDan~-~~~d~~~A~~-~~~~l 217 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAA-------GPEMEVQIDLAS-KWHTCGHSAM-MAKRL 217 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHH-------CSSSEEEEECTT-TTCSHHHHHH-HHHHS
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHh-------CCCCeEEEECCC-CCCCHHHHHH-HHHHh
Confidence 377778889999999998875332 32 2 222234455532 234455555532 233 433322 22344
Q ss_pred HHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCC
Q 024751 116 KTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 116 ~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
+.+++ .++..|.+. +.++.+.++++.-.|- ..|=+-++.+.+.++++...++
T Consensus 218 ~~~~i-----~~iEqP~~~---------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d- 270 (374)
T 3sjn_A 218 EEFNL-----NWIEEPVLA---------------------DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNAD- 270 (374)
T ss_dssp GGGCC-----SEEECSSCT---------------------TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCS-
T ss_pred hhcCc-----eEEECCCCc---------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCC-
Confidence 55554 445555221 1246677777764443 2333456788899999876655
Q ss_pred eeeccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 195 TVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 195 ~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
++|+...-+- .-..+...|+++|+.++..+.
T Consensus 271 -~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 271 -IVQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp -EECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC
T ss_pred -EEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 7777765542 225799999999999998776
No 97
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=62.88 E-value=36 Score=30.08 Aligned_cols=163 Identities=13% Similarity=0.148 Sum_probs=94.9
Q ss_pred cccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCC-------------------cC-CHHHH------HHHHHHH
Q 024751 26 RKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASL-------------------YG-TERAL------GEAIAEA 79 (263)
Q Consensus 26 ~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~-------------------Yg-se~~l------G~al~~~ 79 (263)
-.||..+.+.. .+.++..+..+.+++.|++.|=.-.. +. ..+.+ =+++|+.
T Consensus 141 ~~v~~y~~~~~---~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a 217 (421)
T 4hnl_A 141 TAIPAYTHAVA---DNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEK 217 (421)
T ss_dssp SCEEEEEEEEE---SSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccCC---CCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHH
Confidence 34555443322 36788888899999999997743211 00 11111 2344443
Q ss_pred HhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHH
Q 024751 80 LKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWE 159 (263)
Q Consensus 80 ~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
-.+++.|..-... .++++...+-+ +.|+. .+++++..|.+ .+-++
T Consensus 218 -------~G~~~~l~vDan~-~~~~~~A~~~~-~~l~~-----~~i~~iEeP~~---------------------~~d~~ 262 (421)
T 4hnl_A 218 -------YGNQFQMLHDVHE-RLHPNQAIQFA-KAAEP-----YQLFFLEDILP---------------------PDQSH 262 (421)
T ss_dssp -------HTTSSEEEEECTT-CSCHHHHHHHH-HHHGG-----GCCSEEECCSC---------------------GGGGG
T ss_pred -------hCCCceEeccccc-cCCHHHHHHHH-HHhhh-----hhhcccccCCc---------------------ccchH
Confidence 1344555554432 23444443322 22333 46667776632 12345
Q ss_pred HHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCCC
Q 024751 160 AMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 160 ~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
.+.+|+++-.|. ..|=+-++...+.++++...++ ++|+..+-+- .-.++...|+++|+.+...++..
T Consensus 263 ~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d--~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~~ 333 (421)
T 4hnl_A 263 WLTQLRSQSATPIATGELFNNPMEWQELVKNRQID--FMRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPSD 333 (421)
T ss_dssp GHHHHHTTCCCCEEECTTCCSGGGTHHHHHTTCCS--EECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSS
T ss_pred HHHHHHhcCCCCeecCcceehhHHHHHHHhcCCce--EEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCcc
Confidence 677777665443 4455677888999999876655 6776655432 23678999999999998877653
No 98
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=62.74 E-value=80 Score=27.72 Aligned_cols=153 Identities=16% Similarity=0.135 Sum_probs=90.7
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
.++++..+..+.+.+.|++.|=.-...+ .....=+++|+.+ .+++.|..-... .++++...+- ++.
T Consensus 187 ~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~-------g~~~~l~vDaN~-~~~~~~A~~~----~~~ 254 (412)
T 4h1z_A 187 DTRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERL-------GPAVRIACDMHW-AHTASEAVAL----IKA 254 (412)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH-------CSSSEEEEECCS-CCCHHHHHHH----HHH
T ss_pred CcHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhcc-------CCeEEEEecccc-CCCHHHHHHH----HHh
Confidence 3566777778888899999875443222 2222234566542 233334333321 2344433322 233
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~ 196 (263)
| +..++.++..|... +-++.+.+|++.-.|. +.|=+-++...+.++++...++ +
T Consensus 255 l--~~~~l~~iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--i 309 (412)
T 4h1z_A 255 M--EPHGLWFAEAPVRT---------------------EDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALA--I 309 (412)
T ss_dssp H--GGGCEEEEECCSCT---------------------TCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCS--E
T ss_pred h--cccccceecCCCCc---------------------cchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCC--E
Confidence 3 23567888877432 1245677777664442 4455778899999999876655 6
Q ss_pred eccccCC--CCCcHHHHHHHHhCCceEEEccCCCC
Q 024751 197 NQVEMNP--AWQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 197 ~q~~~~~--~~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
+|....- +..-..+...|+.+|+.++..+++++
T Consensus 310 v~~d~~~GGit~~~kia~~A~~~gi~v~~h~~~~~ 344 (412)
T 4h1z_A 310 VQPEMGHKGITQFMRIGAYAHVHHIKVIPHATIGA 344 (412)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHHTTCEECCCCCSSC
T ss_pred EEecCCCCChHHHHHHHHHHHHCCCcEEecCCcch
Confidence 6665421 01124688999999999999888875
No 99
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=62.11 E-value=42 Score=29.38 Aligned_cols=148 Identities=13% Similarity=0.054 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhC
Q 024751 42 ESAMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQ 119 (263)
Q Consensus 42 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg 119 (263)
+++..+..+.+++.|++.|..=-..+ .+...=+++|+.+ .+++-|..... ..++++...+ +-+.|+.++
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~~~~~d~~~v~avR~a~-------g~~~~l~vDaN-~~~~~~~A~~-~~~~L~~~~ 226 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGFDDARDVRNALHVRELL-------GAATPLMADAN-QGWDLPRARQ-MAQRLGPAQ 226 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSSCHHHHHHHHHHHHHHH-------CSSSCEEEECT-TCCCHHHHHH-HHHHHGGGC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCHHHHHHHHHHHHHhc-------CCCceEEEeCC-CCCCHHHHHH-HHHHHHHhC
Confidence 56677788888999999886532222 1222334555542 22333444442 2334443332 234455555
Q ss_pred CCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeeec
Q 024751 120 IEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVNQ 198 (263)
Q Consensus 120 ~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 198 (263)
++ ++..|.+. ...++.+.++++.-.|- ..|=+-++.+++.++++...++ ++|
T Consensus 227 i~-----~iEeP~~~--------------------~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~v~ 279 (392)
T 3ddm_A 227 LD-----WLEEPLRA--------------------DRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLR--VMQ 279 (392)
T ss_dssp CS-----EEECCSCT--------------------TSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEE--EEC
T ss_pred CC-----EEECCCCc--------------------cchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCC--EEE
Confidence 44 44555321 00156777777654443 3344667899999999876544 677
Q ss_pred cccCCCC---CcHHHHHHHHhCCceEEEcc
Q 024751 199 VEMNPAW---QQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 199 ~~~~~~~---~~~~~i~~~~~~gi~v~a~s 225 (263)
+...-+- .-..+...|+++|+.++...
T Consensus 280 ~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 280 PDLAKWGGFSGCLPVARAVVAAGLRYCPHY 309 (392)
T ss_dssp CCTTTTTHHHHHHHHHHHHHHTTCEECCEE
T ss_pred eCcchhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 6654432 23579999999999997554
No 100
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=61.94 E-value=20 Score=28.15 Aligned_cols=80 Identities=14% Similarity=0.104 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHc-CCccEEEecCCC--HHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCC
Q 024751 154 YNGVWEAMEECQRH-GLTKSIGVSNFS--PKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAV 230 (263)
Q Consensus 154 ~~~~~~~l~~l~~~-G~ir~iGvs~~~--~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~ 230 (263)
..+.+++|.++++. ++|--+|..|.. .+.+..++ +++ +.+..|+..+.-...+..+++.|+.++.- +
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll---~~~--i~~~~~~~~~e~~~~i~~l~~~G~~vvVG----~- 149 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAML---GVK--IKEFLFSSEDEITTLISKVKTENIKIVVS----G- 149 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHH---TCE--EEEEEECSGGGHHHHHHHHHHTTCCEEEE----C-
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHh---CCc--eEEEEeCCHHHHHHHHHHHHHCCCeEEEC----C-
Confidence 67888999998876 456666666653 34445554 333 55556655444467999999999999773 2
Q ss_pred CCCCCCCCCCCcHHHHHHHHHhCCC
Q 024751 231 GSSWGTNQVMNNEALKQIAALQQGE 255 (263)
Q Consensus 231 G~l~~~~~~l~~~~l~~ia~~~~~t 255 (263)
....++|+++|..
T Consensus 150 ------------~~~~~~A~~~Gl~ 162 (196)
T 2q5c_A 150 ------------KTVTDEAIKQGLY 162 (196)
T ss_dssp ------------HHHHHHHHHTTCE
T ss_pred ------------HHHHHHHHHcCCc
Confidence 2457777777754
No 101
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=60.92 E-value=64 Score=28.11 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=26.3
Q ss_pred HHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCC
Q 024751 159 EAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 159 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
+.+.++++.=.+--|+...++++..+++++....+.
T Consensus 289 ~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~ 324 (377)
T 2r14_A 289 GFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADA 324 (377)
T ss_dssp THHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceE
Confidence 344555655566778888888999999999876663
No 102
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=60.64 E-value=26 Score=30.14 Aligned_cols=109 Identities=10% Similarity=0.053 Sum_probs=58.8
Q ss_pred CCChhHHHHHHHHHHHHhCCCcccEEEee-cCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc-CCccEEEec--
Q 024751 101 DAHRDLVVPALKKSLKTLQIEYVDLYLIH-WPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH-GLTKSIGVS-- 176 (263)
Q Consensus 101 ~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs-- 176 (263)
..+.+. +..+-+.|.++|+++|.+=+.- ||.... .. .+ . ....|+.++++++. ..++...+.
T Consensus 26 ~~~~e~-k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp---~~-g~------~---~~~~~e~l~~i~~~~~~~~i~~l~~p 91 (345)
T 1nvm_A 26 QYTLDD-VRAIARALDKAKVDSIEVAHGDGLQGSSF---NY-GF------G---RHTDLEYIEAVAGEISHAQIATLLLP 91 (345)
T ss_dssp CCCHHH-HHHHHHHHHHHTCSEEECSCTTSTTCCBT---TT-BC------C---SSCHHHHHHHHHTTCSSSEEEEEECB
T ss_pred CCCHHH-HHHHHHHHHHcCCCEEEEecCCCCCCCCC---cc-cC------C---CCCHHHHHHHHHhhCCCCEEEEEecC
Confidence 344444 3445556777998777762110 331110 00 00 0 12245566666654 245555552
Q ss_pred CC-CHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 177 NF-SPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 177 ~~-~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
+. ..+.++++.+. .++...+-...|....-.+.+++|+++|+.+..+
T Consensus 92 ~~~~~~~i~~a~~a-Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 92 GIGSVHDLKNAYQA-GARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp TTBCHHHHHHHHHH-TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred CcccHHHHHHHHhC-CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 22 46667777765 5554444444444444578999999999988765
No 103
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=59.50 E-value=86 Score=27.04 Aligned_cols=149 Identities=8% Similarity=0.068 Sum_probs=91.2
Q ss_pred CChHHHHHHHHHHHHc-CCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKL-GYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSL 115 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL 115 (263)
.++++..+..+.+++. |++.|-.=-.-. .+...=+++|+. -.+++-|...... .++.+... +.+
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~-------~g~~~~l~vDan~-~~~~~~a~----~~~ 217 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER-------VDSAVRIAIDGNG-KWDLPTCQ----RFC 217 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH-------SCTTCEEEEECTT-CCCHHHHH----HHH
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH-------cCCCCcEEeeCCC-CCCHHHHH----HHH
Confidence 3678888888899999 999886432211 223334555654 2345556666532 33444332 233
Q ss_pred HHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCC
Q 024751 116 KTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 116 ~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
+.|. ..++.++..|.+. +.++.+.+++++-.|. ..|=+-++.+.+.++++...++
T Consensus 218 ~~l~--~~~i~~iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d- 273 (372)
T 3tj4_A 218 AAAK--DLDIYWFEEPLWY---------------------DDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVA- 273 (372)
T ss_dssp HHTT--TSCEEEEESCSCT---------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS-
T ss_pred HHHh--hcCCCEEECCCCc---------------------hhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCC-
Confidence 3442 3567777777321 1255677777654443 4444668899999999876655
Q ss_pred eeeccccCCCC---CcHHHHHHHHhCCceEEEcc
Q 024751 195 TVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 195 ~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~s 225 (263)
++|+..+-+- .-..+...|+++|+.++..+
T Consensus 274 -~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 274 -YVQPDVTRLGGITEYIQVADLALAHRLPVVPHA 306 (372)
T ss_dssp -EECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred -EEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 7776665432 23579999999999988765
No 104
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=59.45 E-value=86 Score=26.99 Aligned_cols=146 Identities=11% Similarity=0.077 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHcCCcEEeCCCCcCCH--HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCC
Q 024751 43 SAMKSAVLESIKLGYRHFDTASLYGTE--RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQI 120 (263)
Q Consensus 43 ~~~~~~l~~A~~~Gi~~~DtA~~Ygse--~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~ 120 (263)
.+..+.+..+.+.|++.+=.-...+.+ ...=+++|+.+ | +++.|..-... .++++...+-++ .|+.
T Consensus 146 ~~~~~~~~~~~~~Gf~~~K~k~g~~~~~di~~v~avr~~~--g-----~~~~l~vDaN~-~~~~~~A~~~~~-~l~~--- 213 (378)
T 4hpn_A 146 SDNASEMAERRAEGFHACKIKIGFGVEEDLRVIAAVREAI--G-----PDMRLMIDANH-GYTVTEAITLGD-RAAG--- 213 (378)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH--T-----TTSEEEEECTT-CCCHHHHHHHHH-HHGG---
T ss_pred HHHHHHHHHHHHhccceecccccCChHHHHHHHHHHHHhc--C-----CcEEEEEecCc-ccCHHHHHHHHh-hhhh---
Confidence 344555666778899977443333322 22234555542 2 23344333322 234444333222 2333
Q ss_pred CcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeeecc
Q 024751 121 EYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVNQV 199 (263)
Q Consensus 121 ~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 199 (263)
.++.++..|... +-++.+.+|++.-.+. +.|=|-++...+.++++...++ ++|+
T Consensus 214 --~~i~~iEeP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d--~i~~ 268 (378)
T 4hpn_A 214 --FGIDWFEEPVVP---------------------EQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVD--ILQP 268 (378)
T ss_dssp --GCCSCEECCSCT---------------------TCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCS--EECC
T ss_pred --cccchhhcCCCc---------------------cchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCC--EEee
Confidence 456667766321 1245777777665543 4566778889999999877655 7776
Q ss_pred ccCCCC---CcHHHHHHHHhCCceEEEcc
Q 024751 200 EMNPAW---QQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 200 ~~~~~~---~~~~~i~~~~~~gi~v~a~s 225 (263)
...-+- .-..+...|+++|+.++.+.
T Consensus 269 d~~~~GGit~~~~ia~~A~~~gi~v~~h~ 297 (378)
T 4hpn_A 269 DLCGCGGFSEIQKIATLATLHGVRIVPHV 297 (378)
T ss_dssp BTTTTTHHHHHHHHHHHHHHHTCEECCBC
T ss_pred CCeeCCChhHHHHHHHHHHHcCCeEEeCC
Confidence 665432 23578999999999986553
No 105
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=59.24 E-value=25 Score=28.39 Aligned_cols=67 Identities=7% Similarity=0.011 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHc-CCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEE
Q 024751 154 YNGVWEAMEECQRH-GLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 154 ~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a 223 (263)
..+.+++|.++++. ++|--||..|... .+..+.+..+++ +.+..|+..+.-...+..+++.|+.++.
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~-~~~~i~~ll~~~--i~~~~~~~~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIP-ALVAFQKTFNLR--LDQRSYITEEDARGQINELKANGTEAVV 159 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCH-HHHHHHHHHTCC--EEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhh-HHHHHHHHhCCc--eEEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 57788888888875 5677777777654 344555544555 5555554433336789999999999977
No 106
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=58.63 E-value=96 Score=27.29 Aligned_cols=151 Identities=16% Similarity=0.151 Sum_probs=88.6
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCC-------CcCC----------------------------HHHHHHHHHHHHhcCC
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTAS-------LYGT----------------------------ERALGEAIAEALKLGL 84 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~-------~Ygs----------------------------e~~lG~al~~~~~~~~ 84 (263)
.++++..+..+.+++.|++.|-.-- .||. ...+=+++|+.+
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~---- 217 (418)
T 3r4e_A 142 SDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTY---- 217 (418)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHc----
Confidence 4678888889999999999775311 1220 112224455442
Q ss_pred CCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHH
Q 024751 85 VASREELFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEEC 164 (263)
Q Consensus 85 ~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 164 (263)
.+++-|..... ..++.+...+ +-+.|+.+++ .++..|.+.. .++.+.++
T Consensus 218 ---G~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~i-----~~iEqP~~~~---------------------d~~~~~~l 266 (418)
T 3r4e_A 218 ---GFDHHLLHDGH-HRYTPQEAAN-LGKMLEPYQL-----FWLEDCTPAE---------------------NQEAFRLV 266 (418)
T ss_dssp ---CSSSEEEEECT-TCSCHHHHHH-HHHHHGGGCC-----SEEESCSCCS---------------------SGGGGHHH
T ss_pred ---CCCCeEEEeCC-CCCCHHHHHH-HHHHHHhhCC-----CEEECCCCcc---------------------CHHHHHHH
Confidence 23445555553 2344444433 2234555554 4455553211 13456666
Q ss_pred HHcCCccE-EEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 165 QRHGLTKS-IGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 165 ~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
++.-.|-- .|=+-++.+.+.++++...++ ++|+...-+- .-..+...|+++|+.++..+++
T Consensus 267 ~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 267 RQHTVTPLAVGEIFNTIWDAKDLIQNQLID--YIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp HHHCCSCEEECTTCCSGGGTHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HhcCCCCEEEcCCcCCHHHHHHHHHcCCCC--eEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 66554543 333556788899999876655 7777765432 2357999999999999998885
No 107
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=58.63 E-value=5.2 Score=34.48 Aligned_cols=42 Identities=26% Similarity=0.267 Sum_probs=34.6
Q ss_pred cHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHH----hCCCchhhcc
Q 024751 207 QRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAL----QQGETERELG 261 (263)
Q Consensus 207 ~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~----~~~t~~~~~~ 261 (263)
..++++..+++|+.+..-|.=.. ..++.+|.. ||+.|++|+|
T Consensus 148 ~~~l~~~l~~~G~~v~ivSas~~-------------~~v~~~a~~~~~~ygIp~e~ViG 193 (327)
T 4as2_A 148 QRELYNKLMENGIEVYVISAAHE-------------ELVRMVAADPRYGYNAKPENVIG 193 (327)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEH-------------HHHHHHHTCGGGSCCCCGGGEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCcH-------------HHHHHHHhhcccccCCCHHHeEe
Confidence 36899999999999887654432 578889987 8999999998
No 108
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=57.49 E-value=84 Score=27.75 Aligned_cols=151 Identities=18% Similarity=0.216 Sum_probs=88.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCC-CcC-------------------C------HHHHHHHHHHHHhcCCCCCCccEEE
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTAS-LYG-------------------T------ERALGEAIAEALKLGLVASREELFI 93 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~-~Yg-------------------s------e~~lG~al~~~~~~~~~~~R~~~~I 93 (263)
.++++..+.++.+++.|++.|-.=- .++ . ....=+++|+.+ .+++-|
T Consensus 153 ~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~av-------G~d~~L 225 (422)
T 3tji_A 153 ETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKY-------GWKLHI 225 (422)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH-------CSSSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHc-------CCCCEE
Confidence 4678888889999999999775210 010 0 112234455442 234555
Q ss_pred eeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-E
Q 024751 94 TTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-S 172 (263)
Q Consensus 94 ~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~ 172 (263)
..... ..++++...+- -+.|+.+++ .++..|.+. +.++.+.++++.-.|- .
T Consensus 226 ~vDaN-~~~~~~~A~~~-~~~Le~~~i-----~~iEqP~~~---------------------~d~~~~~~l~~~~~iPIa 277 (422)
T 3tji_A 226 LHDVH-ERLFPQQAVQL-AKQLEPFQP-----YFIEDILPP---------------------QQSAWLEQVRQQSCVPLA 277 (422)
T ss_dssp EEECT-TCSCHHHHHHH-HHHHGGGCC-----SEEECCSCG---------------------GGGGGHHHHHHHCCCCEE
T ss_pred EEECC-CCCCHHHHHHH-HHHHHhhCC-----CeEECCCCh---------------------hhHHHHHHHHhhCCCCEE
Confidence 55553 23344443332 234555554 455555321 1234566777654443 3
Q ss_pred EEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 173 IGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 173 iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
.|=+-++.+.+.++++...++ ++|+...-+- .-..+...|+++|+.+...++.
T Consensus 278 ~dE~~~~~~~~~~ll~~ga~d--~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~ 333 (422)
T 3tji_A 278 LGELFNNPAEWHDLIVNRRID--FIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPG 333 (422)
T ss_dssp ECTTCCSGGGTHHHHHTTCCS--EECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred EeCCcCCHHHHHHHHhcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 344567788899999876655 6776665432 2357999999999999888773
No 109
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=57.07 E-value=1e+02 Score=27.01 Aligned_cols=150 Identities=13% Similarity=0.114 Sum_probs=90.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCC--CcC-------C------HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCCh
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTAS--LYG-------T------ERALGEAIAEALKLGLVASREELFITTKLWCSDAHR 104 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~--~Yg-------s------e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~ 104 (263)
.++++..+..+.+++.|++.|-.-. .|+ + ....=+++|+.+ .+++-|...... ..+.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~-------G~d~~l~vDan~-~~~~ 221 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAV-------GTKADLLFGTHG-QFTV 221 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHH-------GGGSEEEECCCS-CBCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHc-------CCCCeEEEeCCC-CcCH
Confidence 3678888888899999999987532 111 1 112234455442 344566666532 3344
Q ss_pred hHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEE-EecCCCHHHH
Q 024751 105 DLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSI-GVSNFSPKKI 183 (263)
Q Consensus 105 ~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l 183 (263)
+...+ +-+.|+.++++ ++..|... +.++.+.++++.-.|.-. |=+-++.+.+
T Consensus 222 ~~A~~-~~~~l~~~~i~-----~iEeP~~~---------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~ 274 (404)
T 4e5t_A 222 SGAKR-LARRLEAYDPL-----WFEEPIPP---------------------EKPEDMAEVARYTSIPVATGERLCTKYEF 274 (404)
T ss_dssp HHHHH-HHHHHGGGCCS-----EEECCSCT---------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHH
T ss_pred HHHHH-HHHHHhhcCCc-----EEECCCCc---------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHH
Confidence 44333 23455666544 45555221 124567777776545433 3345678889
Q ss_pred HHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 184 ETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 184 ~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
.++++...++ ++|+...-+- .-..+...|+++|+.+..+..
T Consensus 275 ~~~i~~~a~d--~v~~d~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 318 (404)
T 4e5t_A 275 SRVLETGAAS--ILQMNLGRVGGLLEAKKIAAMAECHSAQIAPHLY 318 (404)
T ss_dssp HHHHHHTCCS--EECCCTTTSSCHHHHHHHHHHHHHTTCEECCCCS
T ss_pred HHHHHhCCCC--EEecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999877665 7777765542 225799999999999977653
No 110
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=56.00 E-value=1e+02 Score=26.85 Aligned_cols=149 Identities=10% Similarity=0.020 Sum_probs=88.9
Q ss_pred CChHHHHHHH-HHHHHcCCcEEeCCCCc-------C--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHH
Q 024751 40 IDESAMKSAV-LESIKLGYRHFDTASLY-------G--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVP 109 (263)
Q Consensus 40 ~~~~~~~~~l-~~A~~~Gi~~~DtA~~Y-------g--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~ 109 (263)
.++++..+.+ +.+++.|++.|-.=-.. . .+...=+++|+.+ .+++-|..... ..++.+...+
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~-------g~~~~l~vDaN-~~~~~~~A~~ 209 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELL-------GPDAVIGFDAN-NGYSVGGAIR 209 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHH-------CTTCCEEEECT-TCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHh-------CCCCeEEEECC-CCCCHHHHHH
Confidence 3567777788 88899999988643211 1 1222334555542 23344444543 2334444333
Q ss_pred HHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHH
Q 024751 110 ALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILA 188 (263)
Q Consensus 110 ~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 188 (263)
+-+.|+.++++ ++..|.+. +.++.+.++++.-.|- ..|=+-++.+.+.++++
T Consensus 210 -~~~~L~~~~i~-----~iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 262 (393)
T 4dwd_A 210 -VGRALEDLGYS-----WFEEPVQH---------------------YHVGAMGEVAQRLDITVSAGEQTYTLQALKDLIL 262 (393)
T ss_dssp -HHHHHHHTTCS-----EEECCSCT---------------------TCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHH
T ss_pred -HHHHHHhhCCC-----EEECCCCc---------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHH
Confidence 23456666654 44455221 1245677777664443 22335578899999998
Q ss_pred hCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 189 FATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 189 ~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
.. ++ ++|+...-+- .-..+...|+++|+.++..+.
T Consensus 263 ~~-~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 263 SG-VR--MVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HT-CC--EECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred cC-CC--EEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 77 65 7777765542 225799999999999998776
No 111
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=55.86 E-value=6.5 Score=26.43 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=40.2
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEcc
Q 024751 161 MEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 161 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~s 225 (263)
++.+++.|++. .| ..+..++++......++.-.+.++ .....+..+|++++|+++-+.
T Consensus 3 ~~~~~kagk~~-~G-----~~~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSII-IG-----TKQTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEE-ES-----HHHHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCee-Ec-----HHHHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 56677777752 23 466777777777777676666655 333568888999999988755
No 112
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=54.06 E-value=1.2e+02 Score=26.95 Aligned_cols=67 Identities=10% Similarity=0.125 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 158 WEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 158 ~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
++.+.++++.-.|- ..|=+-++.+.+.++++...++ ++|+...-+- .-..+...|+++|+.++..+.
T Consensus 280 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 280 TEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLID--YIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp GGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCS--EECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred HHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCcc--ceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 34566776654443 4455678899999999876655 6776665432 235799999999999987766
No 113
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=53.56 E-value=1.1e+02 Score=26.33 Aligned_cols=152 Identities=8% Similarity=-0.021 Sum_probs=89.2
Q ss_pred ChHHHHHHHHHHHHc-CCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKL-GYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
++++..+..+.+++. |++.|-.=-... .+...=+++|+.+ .+++-|..... ..++.+...+ +-+.|+
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~-------g~~~~l~vDan-~~~~~~~a~~-~~~~l~ 209 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERF-------GDAIELYVDGN-RGWSAAESLR-AMREMA 209 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHH-------GGGSEEEEECT-TCSCHHHHHH-HHHHTT
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHh-------CCCCEEEEECC-CCCCHHHHHH-HHHHHH
Confidence 577788888888988 999875422111 2233345555542 23444555542 2334433322 223344
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~ 195 (263)
.++ +.++..|... +.++.+.++++.-.|. ..|=+-++.+.+.++++....+
T Consensus 210 ~~~-----i~~iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d-- 261 (367)
T 3dg3_A 210 DLD-----LLFAEELCPA---------------------DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSAT-- 261 (367)
T ss_dssp TSC-----CSCEESCSCT---------------------TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCS--
T ss_pred HhC-----CCEEECCCCc---------------------ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCC--
Confidence 444 4455555321 1245677777665454 3344567889999999887666
Q ss_pred eeccccCCC--CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 196 VNQVEMNPA--WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 196 ~~q~~~~~~--~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|+...-+ ..-..+...|+++|+.++..+.+.+
T Consensus 262 ~v~~k~~~~Git~~~~ia~~A~~~gi~~~~~~~~es 297 (367)
T 3dg3_A 262 AISIKTARTGFTGSTRVHHLAEGLGLDMVMGNQIDG 297 (367)
T ss_dssp EEEECHHHHTTHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EEEeehhhhhHHHHHHHHHHHHHcCCeEEECCcCCc
Confidence 666665443 2225789999999999998765543
No 114
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=53.35 E-value=1.1e+02 Score=26.30 Aligned_cols=155 Identities=15% Similarity=0.129 Sum_probs=81.2
Q ss_pred eceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCcC-----CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChh
Q 024751 31 IGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLYG-----TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRD 105 (263)
Q Consensus 31 iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-----se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~ 105 (263)
++.|...+ ..+.+..+.+..+++.+.. .|+ -.+.+.+++.+.. ++.-..+++++++=
T Consensus 66 ~~~~~~~~-~~~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~l~~~l~~~~--g~~~~~~~v~~~~g--------- 127 (421)
T 3l8a_A 66 MWVADMDF-LPVPEIKEAIINYGREHIF------GYNYFNDDLYQAVIDWERKEH--DYAVVKEDILFIDG--------- 127 (421)
T ss_dssp CCSSCCCS-CCCHHHHHHHHHHHHHCCS------SCBCCCHHHHHHHHHHHHHHH--CCCCCGGGEEEESC---------
T ss_pred cccCCCCC-CCCHHHHHHHHHHHhcCCc------CCCCCCHHHHHHHHHHHHHHh--CCCCCHHHEEEcCC---------
Confidence 33443333 3456777888888876532 232 1333444444321 31004566766531
Q ss_pred HHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEec------CCC
Q 024751 106 LVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVS------NFS 179 (263)
Q Consensus 106 ~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs------~~~ 179 (263)
..++++..++.+ +..=|-+++..|.. ......++.+ ...+..+-+. ..+
T Consensus 128 -~~ea~~~a~~~~-~~~gd~Vi~~~~~y---------------------~~~~~~~~~~--g~~~~~~~~~~~~~~~~~d 182 (421)
T 3l8a_A 128 -VVPAISIALQAF-SEKGDAVLINSPVY---------------------YPFARTIRLN--DHRLVENSLQIINGRFEID 182 (421)
T ss_dssp -HHHHHHHHHHHH-SCTEEEEEEEESCC---------------------HHHHHHHHHT--TEEEEEEECEEETTEEECC
T ss_pred -HHHHHHHHHHHh-cCCCCEEEECCCCc---------------------HHHHHHHHHC--CCEEEeccccccCCCeeeC
Confidence 233444444444 23347777776632 1222222221 2334455442 147
Q ss_pred HHHHHHHHHhCCCCCeeeccccCCCC---C-c--HHHHHHHHhCCceEEEccCCC
Q 024751 180 PKKIETILAFATIPPTVNQVEMNPAW---Q-Q--RKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 180 ~~~l~~~~~~~~~~~~~~q~~~~~~~---~-~--~~~i~~~~~~gi~v~a~spl~ 228 (263)
.+.+++++...+.+.+++....|+.- . + .++.+.|+++|+.++.-...+
T Consensus 183 ~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~ 237 (421)
T 3l8a_A 183 FEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQ 237 (421)
T ss_dssp HHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred HHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 88999988754544444433334322 1 1 568899999999999876654
No 115
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=53.01 E-value=1.1e+02 Score=27.19 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=64.1
Q ss_pred ChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecC--CCH
Q 024751 103 HRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSN--FSP 180 (263)
Q Consensus 103 ~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~ 180 (263)
+++.+.+.+.+.++.+ +++++-.|.. .+-|+.+.+|.++..|.=+|=-. +++
T Consensus 271 t~~e~~~~~~~ll~~y-----~i~~IEdPl~---------------------~dD~~g~~~L~~~~~ipI~gDE~~vt~~ 324 (439)
T 2akz_A 271 TGDQLGALYQDFVRDY-----PVVSIEDPFD---------------------QDDWAAWSKFTANVGIQIVGDDLTVTNP 324 (439)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSC---------------------TTCHHHHHHHHHTCSSEEEESTTTTTCH
T ss_pred CHHHHHHHHHHHHHhC-----CCcEEECCCC---------------------cccHHHHHHHHhCCCCEEEeCCCccCCH
Confidence 4455555555555543 6888888842 12377888888887776555332 478
Q ss_pred HHHHHHHHhCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEE-ccCC
Q 024751 181 KKIETILAFATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTA-FSPL 227 (263)
Q Consensus 181 ~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a-~spl 227 (263)
+.+.++++....+ ++|+..+-+ ..-.+++..|+++|+.++. ....
T Consensus 325 ~~~~~~i~~~a~d--~i~iKv~qiGGitea~~ia~lA~~~g~~~~~sh~~g 373 (439)
T 2akz_A 325 KRIERAVEEKACN--CLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSG 373 (439)
T ss_dssp HHHHHHHHTTCCS--EEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSB
T ss_pred HHHHHHHHhCCCC--EEEechhhcCCHHHHHHHHHHHHHCCCeEEeecCCC
Confidence 9999999876555 666655432 2235799999999998655 5544
No 116
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=53.00 E-value=36 Score=28.64 Aligned_cols=99 Identities=12% Similarity=0.083 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHH
Q 024751 106 LVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIET 185 (263)
Q Consensus 106 ~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~ 185 (263)
.-+..+-+.|..+|+++|..-....|... | . +.+.++.+..+.+...++..++. -+.+.+++
T Consensus 30 e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~--------~-------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~ 91 (302)
T 2ftp_A 30 ADKIRLVDDLSAAGLDYIEVGSFVSPKWV--------P-------Q--MAGSAEVFAGIRQRPGVTYAALA-PNLKGFEA 91 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECSCTTTC--------G-------G--GTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHH
T ss_pred HHHHHHHHHHHHcCcCEEEECCCcCcccc--------c-------c--ccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHH
Confidence 44556666789999999888765444210 0 0 11223334444444556666665 47788888
Q ss_pred HHHhCCCCCeeeccccCCCC--------C------cHHHHHHHHhCCceEEE
Q 024751 186 ILAFATIPPTVNQVEMNPAW--------Q------QRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 186 ~~~~~~~~~~~~q~~~~~~~--------~------~~~~i~~~~~~gi~v~a 223 (263)
+++. +++.+.+-...|..+ . -.+.+++|+++|+.|.+
T Consensus 92 a~~a-G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~ 142 (302)
T 2ftp_A 92 ALES-GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRG 142 (302)
T ss_dssp HHHT-TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhC-CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 8874 444332222222211 0 14689999999999864
No 117
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=51.98 E-value=78 Score=27.54 Aligned_cols=144 Identities=15% Similarity=0.110 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHcCCcEEeC--CCCcC---C----H--HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHH
Q 024751 43 SAMKSAVLESIKLGYRHFDT--ASLYG---T----E--RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPAL 111 (263)
Q Consensus 43 ~~~~~~l~~A~~~Gi~~~Dt--A~~Yg---s----e--~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~ 111 (263)
++..+....+.+.|++.|-. +..|+ + + ..+=+++++.+ | +.-.+.| -.. ..++.+...+-
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~--g---~d~~l~v--Dan-~~~~~~~ai~~- 220 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVA--G---PAGKIMI--DAN-NAYNLNLTKEV- 220 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHH--C---TTCCEEE--ECT-TCCCHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHh--C---CCCeEEE--ECC-CCCCHHHHHHH-
Confidence 66677778888999987753 22221 0 1 11122333321 2 2223333 332 23444444333
Q ss_pred HHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc-----CCccEEEecCCCHHHHHHH
Q 024751 112 KKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH-----GLTKSIGVSNFSPKKIETI 186 (263)
Q Consensus 112 ~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-----G~ir~iGvs~~~~~~l~~~ 186 (263)
++.|. ..++.++..|.+ +.++.+.++++. -.|-=.+---++.+.++++
T Consensus 221 ---~~~l~--~~~i~~iE~P~~----------------------~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~ 273 (392)
T 3p3b_A 221 ---LAALS--DVNLYWLEEAFH----------------------EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEW 273 (392)
T ss_dssp ---HHHTT--TSCEEEEECSSS----------------------CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHH
T ss_pred ---HHHHH--hcCCCEEecCCc----------------------ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHH
Confidence 33332 245667776632 124456666654 2333222225667888999
Q ss_pred HHhCCCCCeeeccccCCC--CCcHHHHHHHHhCCceEEEc
Q 024751 187 LAFATIPPTVNQVEMNPA--WQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 187 ~~~~~~~~~~~q~~~~~~--~~~~~~i~~~~~~gi~v~a~ 224 (263)
++....+ ++|+..+-+ ..-.++...|+++|+.++..
T Consensus 274 i~~~~~d--~v~ik~~~~Git~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 274 ATRGRVD--VLQYDIIWPGFTHWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp HHTTSCC--EECCBTTTBCHHHHHHHHHHHHHTTCEECCB
T ss_pred HHcCCCC--EEEeCccccCHHHHHHHHHHHHHcCCEEEec
Confidence 8876655 777776654 11257899999999999886
No 118
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=51.75 E-value=1.2e+02 Score=26.23 Aligned_cols=146 Identities=9% Similarity=0.026 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHcCCcEEeCCCCcCCHH---HHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhC
Q 024751 43 SAMKSAVLESIKLGYRHFDTASLYGTER---ALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTLQ 119 (263)
Q Consensus 43 ~~~~~~l~~A~~~Gi~~~DtA~~Ygse~---~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg 119 (263)
++..+....+.+.|++.|..--.-++-+ ..=+++|+.+ .+++.|..... ..++.+...+-++. |+.+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~-------G~d~~l~vDan-~~~~~~~a~~~~~~-l~~~- 210 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA-------GSSITMILDAN-QSYDAAAAFKWERY-FSEW- 210 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCCCHHHHHTTHHH-HTTC-
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh-------CCCCEEEEECC-CCCCHHHHHHHHHH-Hhhc-
Confidence 7777788888999999887432222212 2233444432 23455555553 23444444333332 4433
Q ss_pred CCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHhCCCCCeeec
Q 024751 120 IEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIG-VSNFSPKKIETILAFATIPPTVNQ 198 (263)
Q Consensus 120 ~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~~~q 198 (263)
-++.++..|.+. +.++.+.++++.-.|--.+ =+-++.+.++++++....+ ++|
T Consensus 211 ---~~i~~iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~v~ 264 (382)
T 2gdq_A 211 ---TNIGWLEEPLPF---------------------DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLD--IIQ 264 (382)
T ss_dssp ---SCEEEEECCSCS---------------------SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCS--EEC
T ss_pred ---cCCeEEECCCCc---------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC--EEe
Confidence 045566666321 1256777777765554333 3456788999999876655 677
Q ss_pred cccCCCC---CcHHHHHHHHhCCceEEEc
Q 024751 199 VEMNPAW---QQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 199 ~~~~~~~---~~~~~i~~~~~~gi~v~a~ 224 (263)
+..+-+- .-.++...|+++|+.++..
T Consensus 265 ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 265 PDVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp CCTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred cCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 6665432 2257899999999998887
No 119
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=51.06 E-value=1.1e+02 Score=25.54 Aligned_cols=135 Identities=14% Similarity=0.059 Sum_probs=77.4
Q ss_pred hhHHHHHHHHHHHHhCCCcccEEEee-cCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHH
Q 024751 104 RDLVVPALKKSLKTLQIEYVDLYLIH-WPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKK 182 (263)
Q Consensus 104 ~~~i~~~~~~sL~~Lg~~~iDl~~lh-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~ 182 (263)
++.+.+..++ +-.-|.+.||+---. +|... +.+ .......+...++.+++++. -|.|=+++++.
T Consensus 28 ~~~a~~~a~~-~v~~GAdiIDIGgestrpga~------~v~------~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~v 92 (280)
T 1eye_A 28 LDDAVKHGLA-MAAAGAGIVDVGGESSRPGAT------RVD------PAVETSRVIPVVKELAAQGI--TVSIDTMRADV 92 (280)
T ss_dssp HHHHHHHHHH-HHHTTCSEEEEECC--------------------------HHHHHHHHHHHHHTTC--CEEEECSCHHH
T ss_pred HHHHHHHHHH-HHHCCCCEEEECCccCCCCCC------CCC------HHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHH
Confidence 4444443322 234588999998532 23111 011 01225667777888877643 47888999999
Q ss_pred HHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCC---CCCCc---------HHHHHHHH
Q 024751 183 IETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTN---QVMNN---------EALKQIAA 250 (263)
Q Consensus 183 l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~---~~l~~---------~~l~~ia~ 250 (263)
++++++.+. +.+|= .+......++++.++++|+.++.+-- +|...... ....+ ....+.|.
T Consensus 93 a~aAl~aGa--~iINd--vsg~~~d~~m~~~~a~~~~~vVlmh~---~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~ 165 (280)
T 1eye_A 93 ARAALQNGA--QMVND--VSGGRADPAMGPLLAEADVPWVLMHW---RAVSADTPHVPVRYGNVVAEVRADLLASVADAV 165 (280)
T ss_dssp HHHHHHTTC--CEEEE--TTTTSSCTTHHHHHHHHTCCEEEECC---CCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC--CEEEE--CCCCCCCHHHHHHHHHhCCeEEEEcC---CCCCcchhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 999999743 44543 33333345799999999999999764 24332110 01111 23455677
Q ss_pred HhCCCchhhc
Q 024751 251 LQQGETEREL 260 (263)
Q Consensus 251 ~~~~t~~~~~ 260 (263)
++|+.+++++
T Consensus 166 ~~Gi~~~~Ii 175 (280)
T 1eye_A 166 AAGVDPARLV 175 (280)
T ss_dssp HTTCCGGGEE
T ss_pred HcCCChhhEE
Confidence 8898887765
No 120
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=50.85 E-value=1.2e+02 Score=26.21 Aligned_cols=151 Identities=11% Similarity=0.088 Sum_probs=88.8
Q ss_pred CChHHHHHHHHHHHHc-CCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKL-GYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSL 115 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL 115 (263)
.++++..+..+.+++. |++.|-.=-... .+...=+++|+.+ .+++-|..... ..++++...+ +-+.|
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~-------G~~~~l~vDaN-~~~~~~~A~~-~~~~l 236 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALL-------GPDIALMLDFN-QSLDPAEATR-RIARL 236 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCSCHHHHHH-HHHHH
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHh-------CCCCeEEEeCC-CCCCHHHHHH-HHHHH
Confidence 3678888888999999 999875432211 2233334555542 23444555543 2334443332 22344
Q ss_pred HHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCC
Q 024751 116 KTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 116 ~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
+.++ +.++..|.+. +.++.+.++++.-.|. ..|=+-++...+.++++...++
T Consensus 237 ~~~~-----i~~iEeP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d- 289 (383)
T 3toy_A 237 ADYD-----LTWIEEPVPQ---------------------ENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASD- 289 (383)
T ss_dssp GGGC-----CSEEECCSCT---------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCS-
T ss_pred HhhC-----CCEEECCCCc---------------------chHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCC-
Confidence 5554 4455555321 1245677777654443 3344567788999999877655
Q ss_pred eeeccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 195 TVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 195 ~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
++|+...-+- .-..+...|+++|+.++..+.+
T Consensus 290 -~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 324 (383)
T 3toy_A 290 -FIMPDLMKVGGITGWLNVAGQADAASIPMSSHILP 324 (383)
T ss_dssp -EECCCTTTTTHHHHHHHHHHHHHHHTCCBCCCSCH
T ss_pred -EEEeCccccCCHHHHHHHHHHHHHcCCEEeecCHH
Confidence 6776665432 2257899999999998765543
No 121
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=49.84 E-value=1.3e+02 Score=26.17 Aligned_cols=146 Identities=10% Similarity=0.054 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHcCCcEEeC-CCCc--CC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCC-ChhHHHHHHHHHHH
Q 024751 44 AMKSAVLESIKLGYRHFDT-ASLY--GT---ERALGEAIAEALKLGLVASREELFITTKLWCSDA-HRDLVVPALKKSLK 116 (263)
Q Consensus 44 ~~~~~l~~A~~~Gi~~~Dt-A~~Y--gs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~-~~~~i~~~~~~sL~ 116 (263)
+..+..+.+++.|++.|=. =-.. .+ ....=+++|+.+ .+++-|...... .. +.+...+-+ +.|+
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~-------G~d~~l~vDaN~-~~~~~~~A~~~~-~~L~ 230 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGIL-------GHDTDMMVDYLY-RFTDWYEVARLL-NSIE 230 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHH-------CSSSEEEEECTT-CCCCHHHHHHHH-HHTG
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHh-------CCCCeEEEeCCC-CCCCHHHHHHHH-HHhh
Confidence 4556778888999998865 1111 11 222334555542 233445445432 23 444433322 2345
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE-EEecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS-IGVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~ 195 (263)
.+| +.++..|.+. +.++.+.++++.-.|-- .|=+-++...+.++++...++
T Consensus 231 ~~~-----i~~iEeP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d-- 282 (394)
T 3mkc_A 231 DLE-----LYFAEATLQH---------------------DDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVH-- 282 (394)
T ss_dssp GGC-----CSEEESCSCT---------------------TCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCS--
T ss_pred hcC-----CeEEECCCCc---------------------hhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCC--
Confidence 554 4455666321 12456777777654543 334556788899999876655
Q ss_pred eeccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 196 VNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 196 ~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
++|+...-+- .-..+...|+++|+.++..+.
T Consensus 283 ~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 283 LLQSDYNRCGGLTELRRITEMATANNVQVMPHNW 316 (394)
T ss_dssp EECCCTTTTTHHHHHHHHHHHHHHTTCEECCCCC
T ss_pred eEecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 7777665432 225799999999999987764
No 122
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=49.76 E-value=84 Score=27.64 Aligned_cols=71 Identities=6% Similarity=-0.055 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHc-----CCc-cEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEcc
Q 024751 155 NGVWEAMEECQRH-----GLT-KSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 155 ~~~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~s 225 (263)
.+-|+.+.+|.++ -.| -..|=+-++.+.+.++++...++ ++|+..+-+- .-.+++..|+++|+.++..+
T Consensus 282 ~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d--~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kko_A 282 PDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCH--MVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCS--EEEECGGGGSSTHHHHHHHHHHHHHTCEEEECC
T ss_pred cccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCC--EEEeCccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 4567788887775 233 24455667889999999876555 6776665432 23679999999999999987
Q ss_pred CC
Q 024751 226 PL 227 (263)
Q Consensus 226 pl 227 (263)
..
T Consensus 360 ~~ 361 (413)
T 1kko_A 360 TC 361 (413)
T ss_dssp CT
T ss_pred CC
Confidence 75
No 123
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=48.96 E-value=1.3e+02 Score=26.02 Aligned_cols=148 Identities=20% Similarity=0.184 Sum_probs=87.5
Q ss_pred ChHHHHHHHHHHHHcCCcEEeC--CCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHh
Q 024751 41 DESAMKSAVLESIKLGYRHFDT--ASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTL 118 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~Dt--A~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~L 118 (263)
+.++..+....+++.|++.|-. .+.. ..+. =+++++. - .++.|..-.. ..++++.. +. ++.|
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~-d~~~-v~avr~a-------~-~~~~l~vDaN-~~~~~~~a-~~----~~~l 224 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKIAPNK-DIQF-VEAVRKS-------F-PKLSLMADAN-SAYNREDF-LL----LKEL 224 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECBTTB-SHHH-HHHHHTT-------C-TTSEEEEECT-TCCCGGGH-HH----HHTT
T ss_pred CHHHHHHHHHHHHHHhhHhheeccChHH-HHHH-HHHHHHH-------c-CCCEEEEECC-CCCCHHHH-HH----HHHH
Confidence 4677777888888999998642 2111 1222 2455542 2 2444444442 23344544 32 3333
Q ss_pred CCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeee
Q 024751 119 QIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVN 197 (263)
Q Consensus 119 g~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 197 (263)
. ..++.++..|.... -++.+.+|++.-.|. ..|=+-++...+.++++...++ ++
T Consensus 225 ~--~~~i~~iEqP~~~~---------------------d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d--~v 279 (393)
T 1wuf_A 225 D--QYDLEMIEQPFGTK---------------------DFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCR--AI 279 (393)
T ss_dssp G--GGTCSEEECCSCSS---------------------CSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCS--EE
T ss_pred H--hCCCeEEECCCCCc---------------------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCC--EE
Confidence 2 34677777774311 135677777654432 3344567889999999876655 66
Q ss_pred ccccCCCC---CcHHHHHHHHhCCceEEEccCCCC
Q 024751 198 QVEMNPAW---QQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 198 q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
|+..+-+- .-.++...|+++|+.++..+.+.+
T Consensus 280 ~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 314 (393)
T 1wuf_A 280 NLKLARVGGMSSALKIAEYCALNEILVWCGGMLEA 314 (393)
T ss_dssp EECTGGGTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred EeChhhhCCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 66655432 225789999999999988766543
No 124
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=48.56 E-value=1.1e+02 Score=25.01 Aligned_cols=131 Identities=13% Similarity=0.049 Sum_probs=70.2
Q ss_pred cCCCcCeEEcCCCCCccccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCCc----CCHHHHHHHHHHHHhcCCC
Q 024751 10 VSINVPEVKLSSASGHRKMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASLY----GTERALGEAIAEALKLGLV 85 (263)
Q Consensus 10 ~~~~~~~~~l~~g~~g~~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Y----gse~~lG~al~~~~~~~~~ 85 (263)
-..++.-++++.| +|.||.-... .+.++..+.++.+.+.|.-.++-=-.| .+...+.+.++.....-
T Consensus 6 ~~v~v~~~~ig~g-----~PkIcvpl~~--~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~-- 76 (258)
T 4h3d_A 6 RKVQVKNITIGEG-----RPKICVPIIG--KNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYI-- 76 (258)
T ss_dssp CCEEETTEEETSS-----SCEEEEEECC--SSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHC--
T ss_pred ceEEEcCEEeCCC-----CCEEEEEeCC--CCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhc--
Confidence 3333445566655 4677655444 567777777888888898766433333 35566666666542210
Q ss_pred CCCccEEEeeCC----CCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHH
Q 024751 86 ASREELFITTKL----WCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAM 161 (263)
Q Consensus 86 ~~R~~~~I~tK~----~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 161 (263)
..-.+.++... +....+.+.-.+-++...+.-.+||+|+=+.. ..+..+.+
T Consensus 77 -~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~------------------------~~~~~~~l 131 (258)
T 4h3d_A 77 -HDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFM------------------------GDEVIDEV 131 (258)
T ss_dssp -TTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGG------------------------CHHHHHHH
T ss_pred -CCCCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhc------------------------cHHHHHHH
Confidence 12235555544 22233333333333433333348888876533 13445566
Q ss_pred HHHHHcCCccEEE
Q 024751 162 EECQRHGLTKSIG 174 (263)
Q Consensus 162 ~~l~~~G~ir~iG 174 (263)
.+...++.++-|.
T Consensus 132 ~~~a~~~~~kiI~ 144 (258)
T 4h3d_A 132 VNFAHKKEVKVII 144 (258)
T ss_dssp HHHHHHTTCEEEE
T ss_pred HHHHHhCCCEEEE
Confidence 6655566666664
No 125
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=48.22 E-value=1.4e+02 Score=25.98 Aligned_cols=154 Identities=12% Similarity=0.091 Sum_probs=92.7
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCC---cCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASL---YGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~---Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
.++++..+.++.+++.|++.|=.=-. ...+...=+++|+.+ +. +-|..-.. ..++++... +.++
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~~------~~--~~L~vDaN-~~w~~~~A~----~~~~ 209 (389)
T 3s5s_A 143 GSPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAAA------PG--ASLILDGN-GGLTAGEAL----ALVA 209 (389)
T ss_dssp SCSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHHC------TT--CEEEEECT-TCSCHHHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHhC------CC--CeEEEECC-CCCCHHHHH----HHHH
Confidence 35677888888999999997742211 113444445666541 22 23333322 223333332 2344
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLT-KSIGVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~ 195 (263)
.|..+-+++.++..|.+. +-++.+.+|.+.-.| -+.|=|-++...+.++++...++
T Consensus 210 ~L~~~~~~i~~iEeP~~~---------------------~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d-- 266 (389)
T 3s5s_A 210 HARRLGADVALLEQPVPR---------------------DDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAAT-- 266 (389)
T ss_dssp HHHHTTCEEEEEECCSCT---------------------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCS--
T ss_pred HHhhCCCCeEEEECCCCc---------------------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCC--
Confidence 442134688999988432 124567777665433 35566778899999998876655
Q ss_pred eeccccCC--CCCcHHHHHHHHhCCceEEEccCCCC
Q 024751 196 VNQVEMNP--AWQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 196 ~~q~~~~~--~~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|+...- +..-..+...|+++|+.++..+.+.+
T Consensus 267 ~v~~k~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 302 (389)
T 3s5s_A 267 VVNIKLMKGGIAEALDIAAVARAAGLGLMIGGMVES 302 (389)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTCEEEECCSSCC
T ss_pred EEEecCCCCCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 66666543 11125689999999999999887754
No 126
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=47.67 E-value=1.4e+02 Score=26.08 Aligned_cols=150 Identities=13% Similarity=0.145 Sum_probs=89.7
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCC--CcC-------CH------HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCCh
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTAS--LYG-------TE------RALGEAIAEALKLGLVASREELFITTKLWCSDAHR 104 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~--~Yg-------se------~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~ 104 (263)
.++++..+..+.+++.|++.|-.-. .|. +. ...=+++|+.+ .+++-|...... ..+.
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~-------G~d~~l~vDaN~-~~~~ 214 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAV-------GSKADLLFGTHG-QMVP 214 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH-------TTSSEEEECCCS-CBCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHh-------CCCCeEEEECCC-CCCH
Confidence 3678888888999999999887532 111 11 12234445432 334556556532 3344
Q ss_pred hHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE-EEecCCCHHHH
Q 024751 105 DLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS-IGVSNFSPKKI 183 (263)
Q Consensus 105 ~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l 183 (263)
+...+ +-+.|+.+++ .++..|.+. +.++.+.++++.-.|-- .|=+-++.+.+
T Consensus 215 ~~A~~-~~~~L~~~~i-----~~iEeP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~ 267 (412)
T 4e4u_A 215 SSAIR-LAKRLEKYDP-----LWFEEPVPP---------------------GQEEAIAQVAKHTSIPIATGERLTTKYEF 267 (412)
T ss_dssp HHHHH-HHHHHGGGCC-----SEEECCSCS---------------------SCHHHHHHHHHTCSSCEEECTTCCHHHHH
T ss_pred HHHHH-HHHHhhhcCC-----cEEECCCCh---------------------hhHHHHHHHHhhCCCCEEecCccCCHHHH
Confidence 43332 2334566554 455555321 12467777877655543 33345678889
Q ss_pred HHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 184 ETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 184 ~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
.++++...++ ++|+...-+- .-..+...|+++|+.+..+..
T Consensus 268 ~~~i~~~a~d--~v~~d~~~~GGit~~~kia~~A~~~gi~v~~h~~ 311 (412)
T 4e4u_A 268 HKLLQAGGAS--ILQLNVARVGGLLEAKKIATLAEVHYAQIAPHLY 311 (412)
T ss_dssp HHHHHTTCCS--EECCCTTTTTSHHHHHHHHHHHHHTTCEECCCCC
T ss_pred HHHHHcCCCC--EEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 9999876655 7777765442 235799999999999977653
No 127
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=47.43 E-value=1.4e+02 Score=25.86 Aligned_cols=161 Identities=12% Similarity=0.137 Sum_probs=91.5
Q ss_pred ccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCC-cC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCC
Q 024751 27 KMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASL-YG--TERALGEAIAEALKLGLVASREELFITTKLWCSDAH 103 (263)
Q Consensus 27 ~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~-Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~ 103 (263)
+++....+.+. +.+.++..+.++.+.+.|++.|=.-.. .. .+...=+++++.+ .+++.|..-... .++
T Consensus 151 ~~~~y~~~~~~-~~~~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~~-------G~~~~l~vDaN~-~~~ 221 (388)
T 4h83_A 151 ELPMIAIGGYY-GEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAA-------GDDFIICIDANQ-GYK 221 (388)
T ss_dssp EEEEEEEECCT-TCTTCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHHH-------CSSSEEEEECTT-CBC
T ss_pred ceEEEeecccc-CCCHHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHhc-------CCCeEEEEecCc-CCC
Confidence 44554444332 134556677788899999997743221 11 1222234455442 234444444322 233
Q ss_pred hhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHH
Q 024751 104 RDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKK 182 (263)
Q Consensus 104 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~ 182 (263)
++... +.++.|. .+++.++..|... .+-++.+.+|++...|. +.|=|-++...
T Consensus 222 ~~~A~----~~~~~l~--~~~~~~iEeP~~~--------------------~~d~~~~~~l~~~~~ipIa~dE~~~~~~~ 275 (388)
T 4h83_A 222 PAVAV----DLSRRIA--DLNIRWFEEPVEW--------------------HNDKRSMRDVRYQGSVPVCAGQTEFSASG 275 (388)
T ss_dssp HHHHH----HHHHHTT--TSCCCCEESCBCS--------------------TTHHHHHHHHHHHSSSCEEECTTCSSHHH
T ss_pred HHHHH----HHHHHhh--hcCcceeecCccc--------------------ccchHHHHHHHhhcCCCccCCccccChHh
Confidence 33332 3334442 3567777776321 12345677777765543 55667889999
Q ss_pred HHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEc
Q 024751 183 IETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 183 l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~ 224 (263)
+.++++...++ ++|....-+- .-..+...|+.+|+.+..+
T Consensus 276 ~~~~i~~~a~d--~i~~d~~~~GGit~~~kia~~A~~~gv~v~~h 318 (388)
T 4h83_A 276 CRDLMETGAID--VCNFDSSWSGGPTAWLRTAAIATSYDVQMGHH 318 (388)
T ss_dssp HHHHHHHTCCS--EECCCGGGTTCHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHcCCCC--eEeecceeCCCHHHHHHHHHHHHHCCCEEEec
Confidence 99999987665 6766654332 2257889999999987544
No 128
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=47.37 E-value=9 Score=19.87 Aligned_cols=18 Identities=39% Similarity=0.613 Sum_probs=10.4
Q ss_pred EEecCCCHHHHHHHHHhC
Q 024751 173 IGVSNFSPKKIETILAFA 190 (263)
Q Consensus 173 iGvs~~~~~~l~~~~~~~ 190 (263)
-||..|+..|++++++++
T Consensus 4 sgvtrfdekqieelldnc 21 (31)
T 4h62_V 4 SGVTRFDEKQIEELLDNC 21 (31)
T ss_dssp ------CHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHH
Confidence 478889999999998864
No 129
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=46.85 E-value=1.4e+02 Score=25.74 Aligned_cols=148 Identities=18% Similarity=0.192 Sum_probs=86.1
Q ss_pred ChHHHHHHHHHHHHcCCcEEeC--CCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHh
Q 024751 41 DESAMKSAVLESIKLGYRHFDT--ASLYGTERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTL 118 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~Dt--A~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~L 118 (263)
++++..+....+++.|++.|=. .+.. ..+. =+++++. - .++.|..-.. ..++++.. +. ++.|
T Consensus 161 ~~~~~~~~a~~~~~~G~~~~KiKvg~~~-d~~~-v~avr~a-------~-~~~~l~vDaN-~~~~~~~a-~~----~~~l 224 (386)
T 1wue_A 161 DLPQLLKQVQLAVEKGYQRVKLKIRPGY-DVEP-VALIRQH-------F-PNLPLMVDAN-SAYTLADL-PQ----LQRL 224 (386)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECBTTB-SHHH-HHHHHHH-------C-TTSCEEEECT-TCCCGGGH-HH----HHGG
T ss_pred CHHHHHHHHHHHHHhhhheEEEeeCcHH-HHHH-HHHHHHh-------C-CCCeEEEeCC-CCCCHHHH-HH----HHHH
Confidence 4677777788888999987642 2111 2222 3556654 2 2333333332 22344544 22 3344
Q ss_pred CCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeee
Q 024751 119 QIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVN 197 (263)
Q Consensus 119 g~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 197 (263)
. ..++.++..|... +-++.+.+|.+.-.|. ..|=+-++...+.++++...++ ++
T Consensus 225 ~--~~~i~~iEqP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d--~i 279 (386)
T 1wue_A 225 D--HYQLAMIEQPFAA---------------------DDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCR--SI 279 (386)
T ss_dssp G--GSCCSCEECCSCT---------------------TCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCS--EE
T ss_pred H--hCCCeEEeCCCCc---------------------ccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCC--EE
Confidence 2 2466677777432 1245667776654332 3445667889999999876655 66
Q ss_pred ccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 198 QVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 198 q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
|+..+-+ ..-.++...|+++|+.++..+.+.+
T Consensus 280 ~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 314 (386)
T 1wue_A 280 NLKIPRVGGIHEALKIAAFCQENDLLVWLGGMFES 314 (386)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred EEchhhhCCHHHHHHHHHHHHHCCCeEEECCCccc
Confidence 6655432 2235799999999999988766643
No 130
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=46.46 E-value=43 Score=25.98 Aligned_cols=60 Identities=17% Similarity=0.304 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHcCCccEEEecC-CCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEE
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSN-FSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a 223 (263)
.+.++.+.+....+ ..||+++ .+.+++.++.+. +.+.. +++.. ..++++.|++.|+.+++
T Consensus 49 ~~~i~~ir~~~~~~--~~ig~~~v~~~~~~~~a~~~-Gad~i-----v~~~~-~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 49 DTVIKELSFLKEKG--AIIGAGTVTSVEQCRKAVES-GAEFI-----VSPHL-DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp HHHHHHTHHHHHTT--CEEEEESCCSHHHHHHHHHH-TCSEE-----ECSSC-CHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHCCCC--cEEEecccCCHHHHHHHHHc-CCCEE-----EcCCC-CHHHHHHHHHcCCcEEC
Confidence 33444444443223 3588844 788888888774 34533 22222 26799999999999986
No 131
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=46.21 E-value=1.4e+02 Score=25.33 Aligned_cols=153 Identities=9% Similarity=0.026 Sum_probs=89.8
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCC--HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHh
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGT--ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKTL 118 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs--e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~L 118 (263)
++++..+....+.+.|++.|..--.... ...+=+++|+. | +.-.+.| -. ...++.+...+-++. |+.+
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v~avr~~---g---~~~~l~v--Da-n~~~~~~~a~~~~~~-l~~~ 208 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKV---T---RGAKYIV--DA-NMGYTQKEAVEFARA-VYQK 208 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHH---S---TTCEEEE--EC-TTCSCHHHHHHHHHH-HHHT
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHHHHHHhh---C---CCCeEEE--EC-CCCCCHHHHHHHHHH-HHhc
Confidence 5677778888889999998864221111 11222555543 3 3333444 32 223455655554433 7777
Q ss_pred CCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEE-ecCCCHHHHHHHHHhCCCCCeee
Q 024751 119 QIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIG-VSNFSPKKIETILAFATIPPTVN 197 (263)
Q Consensus 119 g~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~~~ 197 (263)
+++ ..++..|.+ ...++.+.++++.-.|--.+ =+-++.+.+.++++....+ ++
T Consensus 209 ~i~---~~~iE~P~~---------------------~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d--~v 262 (345)
T 2zad_A 209 GID---IAVYEQPVR---------------------REDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVD--YV 262 (345)
T ss_dssp TCC---CSEEECCSC---------------------TTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCS--EE
T ss_pred CCC---eeeeeCCCC---------------------cccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCC--EE
Confidence 654 114555522 12255677777655454333 3456889999999887666 56
Q ss_pred ccccCC--CCCcHHHHHHHHhCCceEEEccCCCC
Q 024751 198 QVEMNP--AWQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 198 q~~~~~--~~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
|+..+- +..-..+...|+++|+.++..+.+.+
T Consensus 263 ~ik~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 296 (345)
T 2zad_A 263 NIKLMKSGISDALAIVEIAESSGLKLMIGCMGES 296 (345)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTTCEEEECCSSCC
T ss_pred EEecccccHHHHHHHHHHHHHcCCeEEEecCccc
Confidence 654432 11225789999999999999877643
No 132
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=46.02 E-value=1.5e+02 Score=25.79 Aligned_cols=153 Identities=10% Similarity=0.005 Sum_probs=89.6
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcC-----------CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYG-----------TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVP 109 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-----------se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~ 109 (263)
++++..+.++.+++.|++.|=.=-..+ .+...=+++|+.+ + ++-|..-.. ..++++.
T Consensus 165 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~------~--d~~L~vDaN-~~w~~~~--- 232 (393)
T 3u9i_A 165 SVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVA------P--TARLILDGN-CGYTAPD--- 232 (393)
T ss_dssp -CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHS------T--TSEEEEECC-SCCCHHH---
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHC------C--CCeEEEEcc-CCCCHHH---
Confidence 567778888888999998773211111 1122223444431 2 223333322 2233332
Q ss_pred HHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHH
Q 024751 110 ALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLT-KSIGVSNFSPKKIETILA 188 (263)
Q Consensus 110 ~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~ 188 (263)
..+.++.|..+.+++.++..|.+.. -++.+.+|.+.-.| -+.|=+-++...+.++++
T Consensus 233 -A~~~~~~L~~~~~~i~~iEeP~~~~---------------------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 290 (393)
T 3u9i_A 233 -ALRLLDMLGVHGIVPALFEQPVAKD---------------------DEEGLRRLTATRRVPVAADESVASATDAARLAR 290 (393)
T ss_dssp -HHHHHHTTTTTTCCCSEEECCSCTT---------------------CTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHH
T ss_pred -HHHHHHHHhhCCCCeEEEECCCCCC---------------------cHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHH
Confidence 2344555633446888888884321 13466777765433 355667788999999998
Q ss_pred hCCCCCeeeccccCC--CCCcHHHHHHHHhCCceEEEccCCCC
Q 024751 189 FATIPPTVNQVEMNP--AWQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 189 ~~~~~~~~~q~~~~~--~~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
...++ ++|+...- +..-..+...|+++|+.++..+.+.+
T Consensus 291 ~~a~d--~i~~k~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 331 (393)
T 3u9i_A 291 NAAVD--VLNIKLMKCGIVEALDIAAIARTAGLHLMIGGMVES 331 (393)
T ss_dssp TTCCS--EEEECHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred cCCCC--EEEecccccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 76655 66666544 11225789999999999999887754
No 133
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=45.57 E-value=51 Score=29.96 Aligned_cols=101 Identities=11% Similarity=0.119 Sum_probs=71.9
Q ss_pred CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC------------------CCChhHHHHHHHHHHHHhCCCcccEEEee
Q 024751 68 TERALGEAIAEALKLGLVASREELFITTKLWCS------------------DAHRDLVVPALKKSLKTLQIEYVDLYLIH 129 (263)
Q Consensus 68 se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~------------------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh 129 (263)
+-+.+..+-++++... -+-.+||++-++.- +.+++.++ +|+.+.|+|.+.-
T Consensus 144 TyeT~~~~~rk~~gg~---L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~-------~R~~~gyld~~~~- 212 (551)
T 1x87_A 144 TYETFAEVARQHFGGT---LAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPARIQ-------RRIDTNYLDTMTD- 212 (551)
T ss_dssp HHHHHHHHHHHHSTTC---CTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHHHHH-------HHHHTTSCSEEES-
T ss_pred HHHHHHHHHHHhcCCC---CCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHH-------HHHhCCCceeEcC-
Confidence 3455556566654322 47789999988532 34455444 4555678887431
Q ss_pred cCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCC-CCCeeeccccC
Q 024751 130 WPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFAT-IPPTVNQVEMN 202 (263)
Q Consensus 130 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~~~q~~~~ 202 (263)
+++++++-.++.+++|+...||+-..-.+.++++++..- ++...-|...|
T Consensus 213 -----------------------~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSaH 263 (551)
T 1x87_A 213 -----------------------SLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTSAH 263 (551)
T ss_dssp -----------------------CHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSCTT
T ss_pred -----------------------CHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 278999999999999999999999988999999998743 56666787765
No 134
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=45.22 E-value=53 Score=22.51 Aligned_cols=60 Identities=10% Similarity=0.078 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 158 WEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 158 ~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
...|...++.|++. . ...+..+.++......++.-... +-+....+..+|++++|+++.|
T Consensus 4 ~~~L~la~kagk~v-~-----G~~~v~kai~~gka~lViiA~D~-~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 4 AFELRKAMETGKVV-L-----GSNETIRLAKTGGAKLIIVAKNA-PKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHSSCEE-E-----SHHHHHHHHHHTCCSEEEEECCC-CHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhCCEe-E-----CHHHHHHHHHcCCccEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEe
Confidence 44667777788752 2 34677788888877776665553 2222356888899999998776
No 135
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=44.93 E-value=1.4e+02 Score=26.05 Aligned_cols=66 Identities=15% Similarity=0.226 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCCccEE-EecCCCHHHHHHHHHhCCCCCeeeccccCC--CCCcHHHHHHHHhCCceEEEcc
Q 024751 158 WEAMEECQRHGLTKSI-GVSNFSPKKIETILAFATIPPTVNQVEMNP--AWQQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 158 ~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~~~~~--~~~~~~~i~~~~~~gi~v~a~s 225 (263)
++.+.++++.-.|--. |=+-++.+.+.++++...++ ++|+...- +..-..+...|+++|+.++...
T Consensus 251 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~v~~k~~~GGit~~~~ia~~A~~~gi~~~~h~ 319 (409)
T 3go2_A 251 PQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVD--VAIVDTIWNGVWQSMKIAAFADAHDINVAPHN 319 (409)
T ss_dssp HHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCS--EEEECHHHHCHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC--EEEeCCCCCCHHHHHHHHHHHHHcCCEEeecC
Confidence 4467777776555433 33456788899999877655 66666532 1112578999999999998754
No 136
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=44.76 E-value=1.4e+02 Score=24.93 Aligned_cols=133 Identities=13% Similarity=0.081 Sum_probs=76.5
Q ss_pred HHHHHHHHHHH--HhCCCcccEEEee-cCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc-CCccEEEecCCCHH
Q 024751 106 LVVPALKKSLK--TLQIEYVDLYLIH-WPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH-GLTKSIGVSNFSPK 181 (263)
Q Consensus 106 ~i~~~~~~sL~--~Lg~~~iDl~~lh-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~ 181 (263)
....++++.++ .-|.|.||+-.-. +|.... .+ . ..........++.++++ +. -|.|=+++++
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~------v~--~----~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~ 101 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAE------VS--V----EEELQRVIPVVEAIAQRFEV--WISVDTSKPE 101 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCC------CC--H----HHHHHHHHHHHHHHHHHCCC--EEEEECCCHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCc------CC--H----HHHHHHHHHHHHHHHhhcCC--eEEEeCCCHH
Confidence 34444444443 3488999987643 342211 11 0 11134455566666654 32 4788899999
Q ss_pred HHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCC--CCCCCCc---------HHHHHHHH
Q 024751 182 KIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWG--TNQVMNN---------EALKQIAA 250 (263)
Q Consensus 182 ~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~--~~~~l~~---------~~l~~ia~ 250 (263)
.++++++.+ .+.+|- .+.. ...++++.++++|++++.+-- +|.... ......+ ....+.|.
T Consensus 102 va~aAl~aG--a~iINd--vsg~-~d~~~~~~~a~~~~~vVlmh~---~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~ 173 (282)
T 1aj0_A 102 VIRESAKVG--AHIIND--IRSL-SEPGALEAAAETGLPVCLMHM---QGNPKTMQEAPKYDDVFAEVNRYFIEQIARCE 173 (282)
T ss_dssp HHHHHHHTT--CCEEEE--TTTT-CSTTHHHHHHHHTCCEEEECC---SSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcC--CCEEEE--CCCC-CCHHHHHHHHHhCCeEEEEcc---CCCCccccccCccchHHHHHHHHHHHHHHHHH
Confidence 999999974 234553 3333 445789999999999999753 243321 0000111 22445577
Q ss_pred HhCCCchhhc
Q 024751 251 LQQGETEREL 260 (263)
Q Consensus 251 ~~~~t~~~~~ 260 (263)
++|+.+++++
T Consensus 174 ~~Gi~~~~Ii 183 (282)
T 1aj0_A 174 QAGIAKEKLL 183 (282)
T ss_dssp HTTCCGGGEE
T ss_pred HcCCChhhEE
Confidence 8888887765
No 137
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=44.72 E-value=1.1e+02 Score=24.06 Aligned_cols=94 Identities=11% Similarity=-0.012 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhC-CCCCeeeccccCCCC-----CcHHHHHHHHhCCceEEEccCC
Q 024751 154 YNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFA-TIPPTVNQVEMNPAW-----QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 154 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~-~~~~~~~q~~~~~~~-----~~~~~i~~~~~~gi~v~a~spl 227 (263)
-+++++...+--++.-|++|=|.+-+-+....+++.. +++.+++-..+.... ...+..+..++.|+.|+..+=+
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~ 107 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSHI 107 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEecc
Confidence 4555554444333334999999988877766666654 344444332222111 1368999999999999986655
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHhC-CCchhhc
Q 024751 228 GAVGSSWGTNQVMNNEALKQIAALQQ-GETEREL 260 (263)
Q Consensus 228 ~~~G~l~~~~~~l~~~~l~~ia~~~~-~t~~~~~ 260 (263)
-+ | .=+.|.+++| .+|.+++
T Consensus 108 ls-g------------veR~is~kfGG~~p~eii 128 (201)
T 1vp8_A 108 LS-G------------LERSISRKLGGVSRTEAI 128 (201)
T ss_dssp TT-T------------THHHHHHHTCCCCHHHHH
T ss_pred cc-c------------hhHHHHHhcCCCCHHHHH
Confidence 43 2 2255677774 6776654
No 138
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=44.66 E-value=1.4e+02 Score=25.15 Aligned_cols=155 Identities=12% Similarity=0.009 Sum_probs=87.0
Q ss_pred ChHHHHHHHHHHHHcCCcEEeCCCCcCC-H--HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFDTASLYGT-E--RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs-e--~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
++++..+.++.+++.|++.|-.--.-.. + ...=+++++. -.+++-|..-.. ..++++...+-++. |+.
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~-------~g~~~~L~vDaN-~~~~~~~A~~~~~~-l~~ 186 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAA-------LPPGAKLRLDAN-GSWDRATANRWFAW-LDR 186 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHH-------SCTTCEEEEECT-TCCCHHHHHHHHHH-HHH
T ss_pred ChHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHH-------cCCCCEEEEccc-CCCCHHHHHHHHHH-HHh
Confidence 4566667778888889887753221111 1 2223344443 122333333322 22345555444433 555
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLT-KSIGVSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~ 196 (263)
++ -.++.++..|.+. +-++.+.+|.+.-.| -..|=|-++...+.++++..-.+ +
T Consensus 187 ~~--~~~i~~iEqP~~~---------------------~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~--~ 241 (332)
T 2ozt_A 187 HG--NGKIEYVEQPLPP---------------------DQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPG--F 241 (332)
T ss_dssp HC--CTTEEEEECCSCT---------------------TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCS--E
T ss_pred hc--cCCcceeECCCCC---------------------CCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCC--E
Confidence 42 1378888887431 124566666654333 24455677889999998875544 4
Q ss_pred eccccCCCCCcHHHHHHHHhC--CceEEEccCCCC
Q 024751 197 NQVEMNPAWQQRKLVEFCKSK--SIIVTAFSPLGA 229 (263)
Q Consensus 197 ~q~~~~~~~~~~~~i~~~~~~--gi~v~a~spl~~ 229 (263)
+|+..+..---.++.+.|+++ |+.++..+.+.+
T Consensus 242 i~ik~~~~GGi~~i~~~A~~~~~gi~~~~~~~~es 276 (332)
T 2ozt_A 242 FVIKTALFGDPDSLSLLLRRGLEPQRLVFSSALEG 276 (332)
T ss_dssp EEECHHHHSCHHHHHHHHHTTCCGGGEEEBCCSCC
T ss_pred EEEChhhhCCHHHHHHHHHHhCCCCcEEEeCCcch
Confidence 555443321124789999999 999998876643
No 139
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=44.33 E-value=52 Score=27.76 Aligned_cols=99 Identities=8% Similarity=0.058 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHH
Q 024751 106 LVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIET 185 (263)
Q Consensus 106 ~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~ 185 (263)
.-+..+-+.|.++|+++|.+-....|... | . +.+.++.+..+.+...++..++. -+...++.
T Consensus 28 e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~--------p-------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~ 89 (307)
T 1ydo_A 28 EDKITWINQLSRTGLSYIEITSFVHPKWI--------P-------A--LRDAIDVAKGIDREKGVTYAALV-PNQRGLEN 89 (307)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEECSCTTTC--------G-------G--GTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcCcccc--------c-------c--cCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHH
Confidence 44556667789999999999875544211 0 0 11223344444444566666766 36778888
Q ss_pred HHHhCCCCCeeeccccCCCC------C--------cHHHHHHHHhCCceEEE
Q 024751 186 ILAFATIPPTVNQVEMNPAW------Q--------QRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 186 ~~~~~~~~~~~~q~~~~~~~------~--------~~~~i~~~~~~gi~v~a 223 (263)
+++.. ++.+-+-...|..+ . -.+.+++++++|+.+.+
T Consensus 90 a~~~g-~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~ 140 (307)
T 1ydo_A 90 ALEGG-INEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRA 140 (307)
T ss_dssp HHHHT-CSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCC-cCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 88753 34322222222211 0 14679999999999863
No 140
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=44.03 E-value=1.6e+02 Score=25.55 Aligned_cols=146 Identities=10% Similarity=0.044 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHcCCcEEeC-CCCc--CC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCC-ChhHHHHHHHHHHH
Q 024751 44 AMKSAVLESIKLGYRHFDT-ASLY--GT---ERALGEAIAEALKLGLVASREELFITTKLWCSDA-HRDLVVPALKKSLK 116 (263)
Q Consensus 44 ~~~~~l~~A~~~Gi~~~Dt-A~~Y--gs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~-~~~~i~~~~~~sL~ 116 (263)
+..+..+.+++.|++.|=. =-.. .+ ....=+++|+.+ .+++-|...... .. +.+...+- -+.|+
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~-------G~d~~l~vDan~-~~~~~~~A~~~-~~~L~ 225 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVI-------GWDMDMMVDCLY-RWTDWQKARWT-FRQLE 225 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHH-------CSSSEEEEECTT-CCSCHHHHHHH-HHHTG
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHh-------CCCCeEEEECCC-CCCCHHHHHHH-HHHHh
Confidence 4556778888999998865 1111 11 222334555542 234445555432 23 44433332 23455
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEE-EecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSI-GVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~ 195 (263)
.+|+ .++..|.+. +.++.+.++++.-.|--+ |=+-++...+.++++...++
T Consensus 226 ~~~i-----~~iEeP~~~---------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d-- 277 (394)
T 3mqt_A 226 DIDL-----YFIEACLQH---------------------DDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGIS-- 277 (394)
T ss_dssp GGCC-----SEEESCSCT---------------------TCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCS--
T ss_pred hcCC-----eEEECCCCc---------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCC--
Confidence 5554 455655321 124567777776555433 33456788899999876655
Q ss_pred eeccccCCCC---CcHHHHHHHHhCCceEEEccC
Q 024751 196 VNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 196 ~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~sp 226 (263)
++|+...-+- .-..+...|+++|+.++..+.
T Consensus 278 ~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 278 VVQSDYNRCGGVTELLRIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp EECCCTTTSSCHHHHHHHHHHHHHHTCEECCCCC
T ss_pred eEecCccccCCHHHHHHHHHHHHHcCCEEeccCC
Confidence 6777765542 225799999999999987764
No 141
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=43.96 E-value=71 Score=22.87 Aligned_cols=64 Identities=16% Similarity=0.142 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
..+.+.|....+.|++. .| ..+..+.++......+++--..++..-...+..+|++++|+++-.
T Consensus 6 ~ki~~~L~~a~k~gkl~-~G-----~~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 6 KKVLKTVKKASKAKNVK-RG-----VKEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHHHHHHHTTTCEE-ES-----HHHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHHHHHcCCcc-cc-----HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEE
Confidence 34556666667777653 34 467778888888888888777766544456888999999998754
No 142
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=43.69 E-value=52 Score=29.97 Aligned_cols=122 Identities=16% Similarity=0.128 Sum_probs=84.5
Q ss_pred HHHHHHHHcCCcEE--eCCCCc---C-------CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC--------------
Q 024751 47 SAVLESIKLGYRHF--DTASLY---G-------TERALGEAIAEALKLGLVASREELFITTKLWCS-------------- 100 (263)
Q Consensus 47 ~~l~~A~~~Gi~~~--DtA~~Y---g-------se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~-------------- 100 (263)
+-+...-..|...+ =||.+| | .-+.+..+-++++... -+-.+||++-++.-
T Consensus 116 e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~---L~G~~~lTaGLGGMgGAQplA~~mag~v 192 (557)
T 1uwk_A 116 EHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGGS---LKGKWVLTAGLGGMGGAQPLAATLAGAC 192 (557)
T ss_dssp HHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSSC---CTTCEEEEECCSTTTTHHHHHHHHTTCE
T ss_pred HHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCC---CCceEEEEecCCccchhhHHHHHHcCce
Confidence 34566677888766 255554 2 3455566666654322 47789999988532
Q ss_pred ----CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEec
Q 024751 101 ----DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVS 176 (263)
Q Consensus 101 ----~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 176 (263)
+.+++.++ +|+.+.|+|.+. .+++++++-.++.+++|+...||+-
T Consensus 193 ~i~~Evd~~ri~-------~R~~~gyld~~~------------------------~~ldeal~~~~~a~~~~~~~SIg~~ 241 (557)
T 1uwk_A 193 SLNIESQQSRID-------FRLETRYVDEQA------------------------TDLDDALVRIAKYTAEGKAISIALH 241 (557)
T ss_dssp EEEEESCHHHHH-------HHHHTTSCCEEC------------------------SSHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEEECHHHHH-------HHHhCCCceeEc------------------------CCHHHHHHHHHHHHHcCCceEEEEe
Confidence 33454444 455567888642 1278999999999999999999999
Q ss_pred CCCHHHHHHHHHhCC-CCCeeeccccC
Q 024751 177 NFSPKKIETILAFAT-IPPTVNQVEMN 202 (263)
Q Consensus 177 ~~~~~~l~~~~~~~~-~~~~~~q~~~~ 202 (263)
..-.+.++++++..- ++...-|...|
T Consensus 242 GNaadv~~~l~~~~i~~DlvtDQTSaH 268 (557)
T 1uwk_A 242 GNAAEILPELVKRGVRPDMVTDQTSAH 268 (557)
T ss_dssp SCHHHHHHHHHHHTCCCSEECCCSCTT
T ss_pred ccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 988999999998753 56666787765
No 143
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=43.24 E-value=91 Score=25.84 Aligned_cols=99 Identities=15% Similarity=0.244 Sum_probs=57.4
Q ss_pred cccCeeceeccccC-----C-ChH-HHHHHHHHHHH-cCCcEEeCC-CCcC--CHHHHHHHHHHHHhcCCCCCCccEEEe
Q 024751 26 RKMPVIGLGSAVDN-----I-DES-AMKSAVLESIK-LGYRHFDTA-SLYG--TERALGEAIAEALKLGLVASREELFIT 94 (263)
Q Consensus 26 ~~v~~iglG~~~~~-----~-~~~-~~~~~l~~A~~-~Gi~~~DtA-~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~ 94 (263)
-.|-.||.+.|+.. . +.. ...+.|..+.+ --.+.++.- ..|+ +++.+..+.++ ..+++.-+
T Consensus 11 ~~~i~iG~sgW~~~~W~G~fYP~~~~~~~~L~~Ya~~~~F~tVEiNsTFY~~p~~~t~~~W~~~--------tP~~F~F~ 82 (273)
T 1vpq_A 11 HHMVYVGTSGFSFEDWKGVVYPEHLKPSQFLKYYWAVLGFRIVELNFTYYTQPSWRSFVQMLRK--------TPPDFYFT 82 (273)
T ss_dssp -CEEEEEEBCSCCSTTBTTTBCTTCCGGGHHHHHHHTSCCCEEEECCCSSSSSCHHHHHHHHTT--------SCTTCEEE
T ss_pred cceEEEECCCCCCCCcCcccCCCCCCchHHHHHHhCCCCCCeEEECccccCCCCHHHHHHHHHh--------CCCCeEEE
Confidence 44667788777653 0 110 12234444443 257777663 3576 78888888775 46889999
Q ss_pred eCCCCC---C-----CChhHHHHHHHHHHHHh--CCCcccEEEeecCCC
Q 024751 95 TKLWCS---D-----AHRDLVVPALKKSLKTL--QIEYVDLYLIHWPMS 133 (263)
Q Consensus 95 tK~~~~---~-----~~~~~i~~~~~~sL~~L--g~~~iDl~~lh~p~~ 133 (263)
.|.+.. . .+.+...+.+-++++-| | +++..+++.-|-.
T Consensus 83 vKa~r~iTh~~~~~~~~~~~~~~~F~~~~~pL~~~-~kLG~vL~Q~Pps 130 (273)
T 1vpq_A 83 VKTPGSVTHVLWKEGKDPKEDMENFTRQIEPLIEE-QRLKMTLAQFPFS 130 (273)
T ss_dssp EECCHHHHHTHHHHTCCSHHHHHHHHHHHHHHHHT-TCEEEEEEECCTT
T ss_pred EEeChhhcccccccccchHHHHHHHHHHHHhhccC-CCEEEEEEEcCCC
Confidence 998531 1 11122234444566666 5 6788888887743
No 144
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=43.24 E-value=1.6e+02 Score=25.47 Aligned_cols=151 Identities=11% Similarity=0.079 Sum_probs=87.8
Q ss_pred CChHHHHHHHHHHHHc---CCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKL---GYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKK 113 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~---Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~ 113 (263)
.++++..+..+.+++. |++.|-.=-... .+...=+++|+.+ .+++-|..... ..++++...+- -+
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~-------G~~~~l~vDaN-~~~~~~~A~~~-~~ 240 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAV-------GRDTALMVDFN-QGLDMAEAMHR-TR 240 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCCCHHHHHHH-HH
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHh-------CCCCEEEEECC-CCCCHHHHHHH-HH
Confidence 3567788888888989 999875432211 2233334555542 23445555543 23344433222 22
Q ss_pred HHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCC
Q 024751 114 SLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATI 192 (263)
Q Consensus 114 sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~ 192 (263)
.|+.+ ++.++..|.+. +.++.+.++++.-.|. ..|=+-++...+.++++...+
T Consensus 241 ~l~~~-----~i~~iEqP~~~---------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~ 294 (390)
T 3ugv_A 241 QIDDL-----GLEWIEEPVVY---------------------DNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGAC 294 (390)
T ss_dssp HHTTS-----CCSEEECCSCT---------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred HHHhh-----CCCEEECCCCc---------------------ccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCC
Confidence 33443 45556666321 1245667777654443 445567889999999987665
Q ss_pred CCeeeccccCCC---CCcHHHHHHHHhCCceEEEccCC
Q 024751 193 PPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 193 ~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl 227 (263)
+ ++|+...-+ ..-..+...|+++|+.+...+.+
T Consensus 295 d--~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~~ 330 (390)
T 3ugv_A 295 D--LVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHLYP 330 (390)
T ss_dssp S--EECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBSCH
T ss_pred C--EEEeCccccCCHHHHHHHHHHHHHcCCEEeecCHH
Confidence 5 666665432 12257899999999998876544
No 145
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=43.20 E-value=20 Score=22.41 Aligned_cols=19 Identities=21% Similarity=0.256 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHcCCccE
Q 024751 154 YNGVWEAMEECQRHGLTKS 172 (263)
Q Consensus 154 ~~~~~~~l~~l~~~G~ir~ 172 (263)
.+++++.|.+|.++|+||-
T Consensus 39 kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 39 KQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp HHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHHCCCeec
Confidence 6899999999999999973
No 146
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=42.36 E-value=51 Score=29.98 Aligned_cols=122 Identities=19% Similarity=0.159 Sum_probs=84.4
Q ss_pred HHHHHHHHcCCcEE--eCCCCc---C-------CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC--------------
Q 024751 47 SAVLESIKLGYRHF--DTASLY---G-------TERALGEAIAEALKLGLVASREELFITTKLWCS-------------- 100 (263)
Q Consensus 47 ~~l~~A~~~Gi~~~--DtA~~Y---g-------se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~-------------- 100 (263)
+-+...-..|...+ =||.+| | .-+.+..+-++++... -+-.+||++-++.-
T Consensus 112 e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~---L~G~~~lTaGLGGMgGAQplA~~mag~v 188 (552)
T 2fkn_A 112 EHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGS---LKGTLTLTAGLGGMGGAQPLSVTMNEGV 188 (552)
T ss_dssp HHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSSC---CTTCEEEEECCSTTTTHHHHHHHHTTCE
T ss_pred HHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCC---CCceEEEEecCCccchhhHHHHHHcCce
Confidence 34566677888766 255554 2 3455566666654322 47789999988532
Q ss_pred ----CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEec
Q 024751 101 ----DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVS 176 (263)
Q Consensus 101 ----~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 176 (263)
+.+++.++ +|+.+.|+|.+.- +++++++-.++.+++|+...||+-
T Consensus 189 ~i~~Evd~~ri~-------~R~~~gyld~~~~------------------------~ldeal~~~~~a~~~~~~~SIg~~ 237 (552)
T 2fkn_A 189 VIAVEVDEKRID-------KRIETKYCDRKTA------------------------SIEEALAWAEEAKLAGKPLSIALL 237 (552)
T ss_dssp EEEEESCHHHHH-------HHHHTTSCSEEES------------------------CHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEEECHHHHH-------HHHhCCcceeEcC------------------------CHHHHHHHHHHHHHcCCceEEEEe
Confidence 33454444 4555678887431 278999999999999999999999
Q ss_pred CCCHHHHHHHHHhCC-CCCeeeccccC
Q 024751 177 NFSPKKIETILAFAT-IPPTVNQVEMN 202 (263)
Q Consensus 177 ~~~~~~l~~~~~~~~-~~~~~~q~~~~ 202 (263)
..-.+.++++++..- ++...-|...|
T Consensus 238 GNaadv~~~l~~~~i~~DlvtDQTSaH 264 (552)
T 2fkn_A 238 GNAAEVHHTLLNRGVKIDIVTDQTSAH 264 (552)
T ss_dssp SCHHHHHHHHHTTTCCCSEECCCSCTT
T ss_pred ccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 988899999988742 56666787765
No 147
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=41.99 E-value=90 Score=27.83 Aligned_cols=177 Identities=10% Similarity=0.056 Sum_probs=95.3
Q ss_pred HcCCcEEeCCC-----CcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC--CCChhHHHHHHHHHHHHhCCC-cccE
Q 024751 54 KLGYRHFDTAS-----LYGTERALGEAIAEALKLGLVASREELFITTKLWCS--DAHRDLVVPALKKSLKTLQIE-YVDL 125 (263)
Q Consensus 54 ~~Gi~~~DtA~-----~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~--~~~~~~i~~~~~~sL~~Lg~~-~iDl 125 (263)
..++.++-|+= .||.++.+-+++++..+.- ..+-++|.|-.... . +++..-+++.-++.... .+.+
T Consensus 61 ~~~~~~~sT~l~E~d~VfGg~~~L~~aI~~~~~~~---~P~~I~V~tTC~~e~IG---dDi~~v~~~~~~~~~~~~~~pv 134 (458)
T 1mio_B 61 KEPAMASTSSFTEGASVFGGGSNIKTAVKNIFSLY---NPDIIAVHTTCLSETLG---DDLPTYISQMEDAGSIPEGKLV 134 (458)
T ss_dssp SSCCCCEECCCCTTHHHHCSHHHHHHHHHHHHHHT---CCSEEEEEECHHHHHHT---CCHHHHHHHHHHTTCSCTTCEE
T ss_pred cCCCCcceeccccCceeeCcHHHHHHHHHHHHHhc---CCCEEEEECCcHHHHHh---cCHHHHHHHHHHhcCCCCCCeE
Confidence 34555454333 3678888888888775443 45567787776321 2 22333344444444221 3789
Q ss_pred EEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHH-HH-----HcCCccEEEecCCC--HHHHHHHHHhCCCCCeee
Q 024751 126 YLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEE-CQ-----RHGLTKSIGVSNFS--PKKIETILAFATIPPTVN 197 (263)
Q Consensus 126 ~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-l~-----~~G~ir~iGvs~~~--~~~l~~~~~~~~~~~~~~ 197 (263)
+.+|.|...... ..-...++++|-+ +. +.++|.-||-.+.. .+++.++++..++++.+.
T Consensus 135 i~v~tpgf~gs~-------------~~G~~~a~~al~~~l~~~~~~~~~~VNilg~~~~~~d~~eik~lL~~~Gi~v~~l 201 (458)
T 1mio_B 135 IHTNTPSYVGSH-------------VTGFANMVQGIVNYLSENTGAKNGKINVIPGFVGPADMREIKRLFEAMDIPYIMF 201 (458)
T ss_dssp EEECCCTTSSCH-------------HHHHHHHHHHHHHHHCCCCSCCCSCEEEECCSCCHHHHHHHHHHHHHHTCCEEES
T ss_pred EEEECCCCcccH-------------HHHHHHHHHHHHHHHccccCCCCCcEEEECCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 999987543210 0113344444433 22 24567777754332 357888888877765431
Q ss_pred c-----------cccCCCC---------------------Cc---HHHHHHHH-hCCceEEEc-cCCCCCCCCCCCCCCC
Q 024751 198 Q-----------VEMNPAW---------------------QQ---RKLVEFCK-SKSIIVTAF-SPLGAVGSSWGTNQVM 240 (263)
Q Consensus 198 q-----------~~~~~~~---------------------~~---~~~i~~~~-~~gi~v~a~-spl~~~G~l~~~~~~l 240 (263)
. -+|+.+. .. ....++.+ +.|++++.. .|+|-. -
T Consensus 202 ~d~s~~ld~~~~~~~~~~~~gg~~~~ei~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP~~~~~~p~G~~---------~ 272 (458)
T 1mio_B 202 PDTSGVLDGPTTGEYKMYPEGGTKIEDLKDTGNSDLTLSLGSYASDLGAKTLEKKCKVPFKTLRTPIGVS---------A 272 (458)
T ss_dssp SCCTTTSSCCCCSSCCSSCSCSBCHHHHHTTSSCSEEEEESHHHHHHHHHHHHHHSCCCEEEECCCBHHH---------H
T ss_pred ccccccccCcccCccceeCCCCCcHHHHHhhccCCEEEEEchhhHHHHHHHHHHHhCCCEEecCCCcCHH---------H
Confidence 0 0011110 00 23445444 569999987 577630 1
Q ss_pred CcHHHHHHHHHhCCCchh
Q 024751 241 NNEALKQIAALQQGETER 258 (263)
Q Consensus 241 ~~~~l~~ia~~~~~t~~~ 258 (263)
.+..+++||+..|...++
T Consensus 273 T~~~l~~la~~~g~~~~~ 290 (458)
T 1mio_B 273 TDEFIMALSEATGKEVPA 290 (458)
T ss_dssp HHHHHHHHHHHHCCCCCH
T ss_pred HHHHHHHHHHHHCCCchH
Confidence 245688888888876543
No 148
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=41.13 E-value=57 Score=29.84 Aligned_cols=112 Identities=10% Similarity=0.108 Sum_probs=60.4
Q ss_pred cCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC--CCChhHHHHHHHHHHHHhCCC-cccEEEeecCCCCCCCccccC
Q 024751 66 YGTERALGEAIAEALKLGLVASREELFITTKLWCS--DAHRDLVVPALKKSLKTLQIE-YVDLYLIHWPMSAKPSEKLRN 142 (263)
Q Consensus 66 Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~--~~~~~~i~~~~~~sL~~Lg~~-~iDl~~lh~p~~~~~~~~~~~ 142 (263)
||.++.+-++|++..+.- +.+-++|.|-.... . +++..-+++.-++.++. .+.++.+|.|......
T Consensus 125 fGG~~kL~~aI~~~~~~~---~P~~I~V~tTC~~e~IG---dDi~~v~~~~~~~~~ip~~~~Vv~v~tpgf~Gs~----- 193 (523)
T 3u7q_B 125 FGGQQNMKDGLQNCKATY---KPDMIAVSTTCMAEVIG---DDLNAFINNSKKEGFIPDEFPVPFAHTPSFVGSH----- 193 (523)
T ss_dssp HCSHHHHHHHHHHHHHHH---CCSEEEEEECHHHHHHT---CCHHHHHHHHHHTTSSCTTSCCCBCCCCTTSSCH-----
T ss_pred cCcHHHHHHHHHHHHHhh---CCCEEEEeCCcHHHHhc---CCHHHHHHHHHHhcCCCCCceEEEeeCCCCCCCh-----
Confidence 677777778887664432 45667887766321 2 23333344444444432 2467778877543210
Q ss_pred CCCccccccCCHHHHHHHHHH-HHH----------cCCccEEEecCC---CHHHHHHHHHhCCCCCee
Q 024751 143 DIPEEDLVSLDYNGVWEAMEE-CQR----------HGLTKSIGVSNF---SPKKIETILAFATIPPTV 196 (263)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~-l~~----------~G~ir~iGvs~~---~~~~l~~~~~~~~~~~~~ 196 (263)
..-...++++|-+ +.+ .++|.-||-.+. +.+++.++++..++++.+
T Consensus 194 --------~~G~~~a~~alv~~l~~~~~~~~~~~~~~~VNIig~~~~~~gD~~elkrlL~~~Gi~v~~ 253 (523)
T 3u7q_B 194 --------VTGWDNMFEGIARYFTLKSMDDKVVGSNKKINIVPGFETYLGNFRVIKRMLSEMGVGYSL 253 (523)
T ss_dssp --------HHHHHHHHHHHHHHHHGGGGGGCCTTTTCCEEEECCSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred --------hHHHHHHHHHHHHHhcccccccccCCCCCeEEEECCCCCChhHHHHHHHHHHHcCCeEEE
Confidence 0012334444433 222 356777774432 236788999988877543
No 149
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=39.73 E-value=1.8e+02 Score=24.91 Aligned_cols=154 Identities=12% Similarity=0.100 Sum_probs=91.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
.++++..+.++.+++.|++.|=.=-... .+...=+++++.+ +...+.|=.. ..++++... +.++
T Consensus 142 ~~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~------~~~~l~vDaN---~~~~~~~A~----~~~~ 208 (365)
T 3ik4_A 142 GDEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAA------PTAPLIVDGN---CGYDVERAL----AFCA 208 (365)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHS------SSCCEEEECT---TCCCHHHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhC------CCCeEEEECC---CCCCHHHHH----HHHH
Confidence 3677888888889999999774322111 2223334555541 2223333322 233444332 2334
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~ 195 (263)
.|..+-+++.++..|... +.++.+.+|+++-.|. +.|=+-++...+.++++...++
T Consensus 209 ~L~~~~~~i~~iEeP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d-- 265 (365)
T 3ik4_A 209 ACKAESIPMVLFEQPLPR---------------------EDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTAS-- 265 (365)
T ss_dssp HHHHTTCCEEEEECCSCT---------------------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCS--
T ss_pred HHhhCCCCceEEECCCCc---------------------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCC--
Confidence 441133588888887421 1245677777654443 4555678899999998877655
Q ss_pred eeccccCC--CCCcHHHHHHHHhCCceEEEccCCCC
Q 024751 196 VNQVEMNP--AWQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 196 ~~q~~~~~--~~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|+..+- +..-.++...|+++|+.++..+.+.+
T Consensus 266 ~v~ik~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 301 (365)
T 3ik4_A 266 VINIKLMKAGVAEGLKMIAIAQAAGLGLMIGGMVES 301 (365)
T ss_dssp EEEECHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EEEEcCCccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 66666543 11125789999999999999887754
No 150
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=39.31 E-value=40 Score=23.98 Aligned_cols=64 Identities=11% Similarity=0.113 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 154 YNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 154 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
.+.+...|....+.|++ . ....+..+.++......++.-.+.++ ....++..+|..++|+++-+
T Consensus 11 ~~~i~~~L~la~kagk~-~-----~G~~~t~kai~~gkakLVilA~D~~~-~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 11 GENINNKLQLVMKSGKY-T-----LGYKTVLKTLRSSLGKLIILANNCPP-LRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp GGHHHHHHHHHHTTCEE-E-----ESHHHHHHHHHTTCCSEEEECSCCCH-HHHHHHHHHHHHTTCCEECC
T ss_pred HHHHHHHHHHHHHhCCe-e-----ECHHHHHHHHHcCCceEEEEeCCCCH-HHHHHHHHHHHHcCCcEEEe
Confidence 45677788888888875 2 23577888888888888777766655 23467888999999999987
No 151
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=39.27 E-value=1.9e+02 Score=25.10 Aligned_cols=151 Identities=12% Similarity=0.179 Sum_probs=89.2
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCC-Cc---------------C----C------HHHHHHHHHHHHhcCCCCCCccEEE
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTAS-LY---------------G----T------ERALGEAIAEALKLGLVASREELFI 93 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~-~Y---------------g----s------e~~lG~al~~~~~~~~~~~R~~~~I 93 (263)
.++++..+..+.+++.|++.|-.=- .+ | . ....=+++|+.+ .+++-|
T Consensus 132 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~-------G~d~~l 204 (401)
T 3sbf_A 132 DTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKY-------GNQFHI 204 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH-------TTSSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHc-------CCCCEE
Confidence 4678888889999999999875311 01 0 0 112234555542 234555
Q ss_pred eeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-E
Q 024751 94 TTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-S 172 (263)
Q Consensus 94 ~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~ 172 (263)
...... .++.+...+ +-+.|+.+++++ +..|.+. +.++.+.++++.-.|- .
T Consensus 205 ~vDan~-~~~~~~A~~-~~~~L~~~~i~~-----iEqP~~~---------------------~~~~~~~~l~~~~~iPIa 256 (401)
T 3sbf_A 205 LHDVHE-RLFPNQAIQ-FAKEVEQYKPYF-----IEDILPP---------------------NQTEWLDNIRSQSSVSLG 256 (401)
T ss_dssp EEECTT-CSCHHHHHH-HHHHHGGGCCSC-----EECSSCT---------------------TCGGGHHHHHTTCCCCEE
T ss_pred EEECCC-CCCHHHHHH-HHHHHHhcCCCE-----EECCCCh---------------------hHHHHHHHHHhhCCCCEE
Confidence 555532 334444333 223456666544 4555321 1134567777654443 3
Q ss_pred EEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 173 IGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 173 iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
.|=+-++.+.+.++++...++ ++|+..+-+- .-..+...|+++|+.++.+++.
T Consensus 257 ~dE~~~~~~~~~~~i~~~~~d--~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 257 LGELFNNPEEWKSLIANRRID--FIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp ECTTCCSHHHHHHHHHTTCCS--EECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred eCCccCCHHHHHHHHhcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 344567889999999877655 6776665432 2257999999999999888773
No 152
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=39.17 E-value=86 Score=22.28 Aligned_cols=63 Identities=14% Similarity=0.177 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEE
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a 223 (263)
....+.|...++.|++. .| ..+..+.++......++.--..++..-...+..+|++++|+++-
T Consensus 15 ~~i~~~L~~A~kag~l~-~G-----~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~ 77 (120)
T 1vq8_F 15 DDALEALEVARDTGAVK-KG-----TNETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIF 77 (120)
T ss_dssp HHHHHHHHHHHHSSCEE-ES-----HHHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHcCCEe-EC-----HHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEE
Confidence 44556666777778753 23 57778888888888877777776654345688899999999754
No 153
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=38.96 E-value=75 Score=23.29 Aligned_cols=64 Identities=11% Similarity=0.126 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
..+.+.|....+.|++. .| ..+..++++......+++--..++..-...+-..|+++||+++-.
T Consensus 18 ~ki~~~L~lA~k~gkl~-~G-----~~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v 81 (134)
T 2ale_A 18 QQILDVVQQAANLRQLK-KG-----ANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFV 81 (134)
T ss_dssp HHHHHHHHHHHHTTCEE-ES-----HHHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHcCCcc-cC-----chHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44566677777888763 34 467788888888788787777777544567889999999997765
No 154
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=38.80 E-value=1.1e+02 Score=24.17 Aligned_cols=94 Identities=11% Similarity=-0.090 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCC-----CcHHHHHHHHhCCceEEEccCCC
Q 024751 154 YNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAW-----QQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 154 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~-----~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
-+++++...+--++.-|++|=|.+-+-+...++++...-+.+++-..+.... ...+..+..+++|+.|+..+=+-
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~l 115 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEGNIVSVTHHAGFREKGQLELEDEARDALLERGVNVYAGSHAL 115 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCSEEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEECCSCTT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccCCEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEeeccc
Confidence 4555554444333334999999998877777776643113333322222111 13689999999999999865443
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHhC-CCchhhc
Q 024751 229 AVGSSWGTNQVMNNEALKQIAALQQ-GETEREL 260 (263)
Q Consensus 229 ~~G~l~~~~~~l~~~~l~~ia~~~~-~t~~~~~ 260 (263)
+ | .=+.|.+|+| .+|.+++
T Consensus 116 s-G------------~eR~is~kfGG~~p~eii 135 (206)
T 1t57_A 116 S-G------------VGRGISNRFGGVTPVEIM 135 (206)
T ss_dssp T-T------------HHHHHHHHHCSCCHHHHH
T ss_pred c-c------------hhHHHHHhcCCCCHHHHH
Confidence 3 1 3467777884 6777665
No 155
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=38.38 E-value=1.3e+02 Score=26.77 Aligned_cols=122 Identities=11% Similarity=0.123 Sum_probs=62.2
Q ss_pred HHHHHHHHcCCcEEeCCCCcC------------CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHH
Q 024751 47 SAVLESIKLGYRHFDTASLYG------------TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKS 114 (263)
Q Consensus 47 ~~l~~A~~~Gi~~~DtA~~Yg------------se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~s 114 (263)
+.++...++|++.+...---. +.+.+-++++...+.|+ ..=.+.+.. +.+..+.+.+.+.++..
T Consensus 154 e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~--~~v~~dlI~--GlPget~e~~~~tl~~~ 229 (457)
T 1olt_A 154 DVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGF--TSTNIDLIY--GLPKQTPESFAFTLKRV 229 (457)
T ss_dssp HHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTC--CSCEEEEEE--SCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC--CcEEEEEEc--CCCCCCHHHHHHHHHHH
Confidence 345555667888763221100 33445566665544453 211222222 34456678888877765
Q ss_pred HHHhCCCcccEEEee-cCCCCCCC---ccccCCCCccccccCCHHHHHH-HHHHHHHcCCccEEEecCCCH
Q 024751 115 LKTLQIEYVDLYLIH-WPMSAKPS---EKLRNDIPEEDLVSLDYNGVWE-AMEECQRHGLTKSIGVSNFSP 180 (263)
Q Consensus 115 L~~Lg~~~iDl~~lh-~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~l~~l~~~G~ir~iGvs~~~~ 180 (263)
..|+.+++-++.+. .|...... .....|.. ....+.++ +.+.|.+.| ...+++|||..
T Consensus 230 -~~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~------~~~~~~~~~~~~~L~~~G-y~~yeis~fa~ 292 (457)
T 1olt_A 230 -AELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSP------QQKLDILQETIAFLTQSG-YQFIGMDHFAR 292 (457)
T ss_dssp -HHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCH------HHHHHHHHHHHHHHHHTT-CEEEETTEEEC
T ss_pred -HhcCcCEEEeecCcCCcCchhHhhccccCCCcCH------HHHHHHHHHHHHHHHHCC-CeEEEechhcC
Confidence 46899999998776 33211000 00011100 01122233 445677777 58999999853
No 156
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=38.29 E-value=28 Score=29.17 Aligned_cols=40 Identities=10% Similarity=-0.154 Sum_probs=23.0
Q ss_pred HHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhCCC
Q 024751 208 RKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQGE 255 (263)
Q Consensus 208 ~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~t 255 (263)
.+.++.|.+.|+..++..|=++ -+++++.+.+.|.+||..
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~s--------i~~~~~~~i~~a~~~gi~ 273 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRL--------LVVDREAVIAAADDLGLF 273 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBC--------EETTHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHcCCeEEEEcCCCc--------EEeCHHHHHHHHHHcCCE
Confidence 4566667777766665544332 113566666677776643
No 157
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=38.11 E-value=86 Score=22.49 Aligned_cols=64 Identities=9% Similarity=0.022 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEE
Q 024751 154 YNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 154 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a 223 (263)
...+.+.|...++.|++. .| ..+..++++......++.-...++..-...+..+|++++|+++-
T Consensus 16 ~~kil~~L~lA~kagklv-~G-----~~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~ 79 (122)
T 3o85_A 16 SLELLNLVKHGASLQAIK-RG-----ANEALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVF 79 (122)
T ss_dssp HHHHHHHHHHHHHTTCEE-ES-----HHHHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHHHHHhCCEe-Ec-----HHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEE
Confidence 355677777778888852 34 46788888888888888777776644345688899999999664
No 158
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=37.71 E-value=1.1e+02 Score=22.02 Aligned_cols=65 Identities=6% Similarity=0.063 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHc----CCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEcc
Q 024751 155 NGVWEAMEECQRH----GLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 155 ~~~~~~l~~l~~~----G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~s 225 (263)
..+-.+|+++... |++. .| ..+..++++......+++-...++......+-.+|++++|+++-+.
T Consensus 6 ~~i~~~l~~~L~~A~~~gkl~-~G-----~~~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~ 74 (126)
T 2xzm_U 6 QQLNEVLAKVIKSSNCQDAIS-KG-----LHEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVP 74 (126)
T ss_dssp HHHHHHHHHHHTTTTSSSCEE-ES-----HHHHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEES
T ss_pred ccHHHHHHHHHHHHHHcCCEe-ec-----HHHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEEC
Confidence 3444566666555 7652 34 4677788888888888877777664444678899999999998543
No 159
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=37.50 E-value=76 Score=22.22 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
..+.+.|...++.|++. . ...+..++++......++.--.. +.+....+-.+|++++|+++.+
T Consensus 7 ~~i~~~L~la~kagkl~-~-----G~~~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 7 MDVNKAIRTAVDTGKVI-L-----GSKRTIKFVKHGEGKLVVLAGNI-PKDLEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp CHHHHHHHHHHHHSEEE-E-----SHHHHHHHHHTTCCSEEEECTTC-BHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHcCCee-e-----CHHHHHHHHHcCCceEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEE
Confidence 34566777777777753 2 35677888887777766665444 3222356888899999998876
No 160
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=37.49 E-value=1.5e+02 Score=23.41 Aligned_cols=86 Identities=17% Similarity=0.158 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCccEEEecCC----------------C---HHHHHHHHHhCCCCCeeeccccCCCCCc-HHHHHHHHhC
Q 024751 158 WEAMEECQRHGLTKSIGVSNF----------------S---PKKIETILAFATIPPTVNQVEMNPAWQQ-RKLVEFCKSK 217 (263)
Q Consensus 158 ~~~l~~l~~~G~ir~iGvs~~----------------~---~~~l~~~~~~~~~~~~~~q~~~~~~~~~-~~~i~~~~~~ 217 (263)
-+.++.+.+.| ...|-+... + .+.+.++++..++.+......++..... ...+++|++-
T Consensus 25 ~~~l~~~~~~G-~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~l 103 (262)
T 3p6l_A 25 TEALDKTQELG-LKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAM 103 (262)
T ss_dssp HHHHHHHHHTT-CCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHcC-CCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHc
Confidence 34566666677 567776532 2 3456666777777665554443322222 5688888888
Q ss_pred CceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhCCC
Q 024751 218 SIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQGE 255 (263)
Q Consensus 218 gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~t 255 (263)
|+..+...|-. ..+ ..+.++|+++|++
T Consensus 104 Ga~~v~~~~~~---------~~~--~~l~~~a~~~gv~ 130 (262)
T 3p6l_A 104 DLEFITCEPAL---------SDW--DLVEKLSKQYNIK 130 (262)
T ss_dssp TCSEEEECCCG---------GGH--HHHHHHHHHHTCE
T ss_pred CCCEEEecCCH---------HHH--HHHHHHHHHhCCE
Confidence 88877765421 111 4567777777764
No 161
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=37.17 E-value=72 Score=21.94 Aligned_cols=62 Identities=6% Similarity=0.026 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 156 GVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 156 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
.+++.|.-.++.|++. . ..++..++++......++.-...++. ....+..+|++++|+++-+
T Consensus 6 ki~~~L~la~kagk~v-~-----G~~~v~kai~~gka~lViiA~D~~~~-~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 6 EWFPLLGLANRARKVV-S-----GEDLVIKEIRNARAKLVLLTEDASSN-TAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp THHHHHHHHHHTTCEE-E-----SHHHHHHHHHTTCCSEEEEETTSCHH-HHHHHHHHHHHTTCCEEEE
T ss_pred hhHHHhhhhhhhhhcc-c-----chhhhHHHHhcCceeEEEEecccccc-chhhhcccccccCCCeeee
Confidence 3566778888888863 2 35778888888888877776666553 2356788899999999876
No 162
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=35.26 E-value=1.1e+02 Score=21.95 Aligned_cols=17 Identities=18% Similarity=0.153 Sum_probs=14.9
Q ss_pred cHHHHHHHHhCCceEEE
Q 024751 207 QRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 207 ~~~~i~~~~~~gi~v~a 223 (263)
+.++.+.|+++||.++.
T Consensus 94 ~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 94 NEELEEILSENGIEPVI 110 (122)
T ss_dssp CHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHcCCeEEC
Confidence 57899999999999985
No 163
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=34.76 E-value=1.7e+02 Score=25.72 Aligned_cols=66 Identities=12% Similarity=0.146 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCCcc---EEEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEcc
Q 024751 158 WEAMEECQRHGLTK---SIGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 158 ~~~l~~l~~~G~ir---~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~s 225 (263)
++.+.+|++.-.+. +.|=+.++...+.++++...++ ++|+..+-+- .-..+...|+++|+.+...+
T Consensus 250 ~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~d--ii~~d~~~~GGitea~kia~lA~a~gv~v~~h~ 321 (404)
T 3ekg_A 250 YWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCD--IIQPDVGWCGGVTELLKISALADAHNALVVPHG 321 (404)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCC--eEecChhhcCCccHHHHHHHHHHHcCCEEEecC
Confidence 45677777664442 4566677888888888866555 6776665432 23579999999999998654
No 164
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=34.34 E-value=2.4e+02 Score=24.76 Aligned_cols=170 Identities=15% Similarity=0.140 Sum_probs=94.2
Q ss_pred CChHHHHHHHHHHHHc----------CCcEEeCCCCcC----CHHHHHHHHHHHHhc-CC-CCCCccEEEeeCCCCCCCC
Q 024751 40 IDESAMKSAVLESIKL----------GYRHFDTASLYG----TERALGEAIAEALKL-GL-VASREELFITTKLWCSDAH 103 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~----------Gi~~~DtA~~Yg----se~~lG~al~~~~~~-~~-~~~R~~~~I~tK~~~~~~~ 103 (263)
.+.++..+.+..+... +++.+=.. .+| +...+-++++...+. |+ + ....+.|+|-...
T Consensus 143 Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~-GgGEPLln~d~v~~~i~~lk~~~Gl~~-s~r~itlsTnG~~---- 216 (404)
T 3rfa_A 143 LRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMM-GMGEPLLNLNNVVPAMEIMLDDFGFGL-SKRRVTLSTSGVV---- 216 (404)
T ss_dssp CCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEEC-SSSCGGGCHHHHHHHHHHHHSTTTTCC-CGGGEEEEESCCH----
T ss_pred CCHHHHHHHHHHHHHHhhhcccccCCCccEEEEe-CCCCcccCHHHHHHHHHHHHhhcCcCc-CCCceEEECCCcH----
Confidence 5677777766665431 23333211 133 456677788766332 32 1 2336788774321
Q ss_pred hhHHHHHHHHHHHHhCCCcccE-EEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHH-HcCC------ccEEEe
Q 024751 104 RDLVVPALKKSLKTLQIEYVDL-YLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQ-RHGL------TKSIGV 175 (263)
Q Consensus 104 ~~~i~~~~~~sL~~Lg~~~iDl-~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~------ir~iGv 175 (263)
..+++.++.+. +-+ +-||.++..... .-+|.. ....+++++++++++. +.|. ++++=+
T Consensus 217 -----p~i~~L~~~~d---~~LaiSLka~d~e~~~--~i~pv~----~~~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI 282 (404)
T 3rfa_A 217 -----PALDKLGDMID---VALAISLHAPNDEIRD--EIVPIN----KKYNIETFLAAVRRYLEKSNANQGRVTIEYVML 282 (404)
T ss_dssp -----HHHHHHHHHCC---CEEEEECCCSSHHHHH--HHSGGG----GTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEB
T ss_pred -----HHHHHHHHhhc---ceEEecccCCCHHHHH--HhcCCc----cCCCHHHHHHHHHHHHHHhCCCcccEEEEEEEe
Confidence 23444444321 123 557877431110 000000 1234788899996654 5565 445545
Q ss_pred c--CCCHHHHHHHHHhCC-CCCeeeccccCCCCCc----------HHHHHHHHhCCceEEEccCCCC
Q 024751 176 S--NFSPKKIETILAFAT-IPPTVNQVEMNPAWQQ----------RKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 176 s--~~~~~~l~~~~~~~~-~~~~~~q~~~~~~~~~----------~~~i~~~~~~gi~v~a~spl~~ 229 (263)
- |.+.+.+.++.+... ....++-++||++... ..+.+.++++|+.+....+.|.
T Consensus 283 ~GvNDs~e~~~~La~ll~~l~~~VnLIpynP~~~~~~~~ps~e~i~~f~~iL~~~Gi~vtiR~~~G~ 349 (404)
T 3rfa_A 283 DHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD 349 (404)
T ss_dssp TTTTCSHHHHHHHHHHTTTSCEEEEEEECCCCTTCCCCBCCHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred cCCCCCHHHHHHHHHHHHcCCCcEEEEeccCCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEcCCCCc
Confidence 4 455778888887654 4455777888876421 3467778899999999887764
No 165
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=34.22 E-value=2.2e+02 Score=24.24 Aligned_cols=153 Identities=10% Similarity=0.057 Sum_probs=89.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcCC-H--HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYGT-E--RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygs-e--~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
.+++...+....+.+.|++.|=.--...+ + ...=+++++. -.+++.|..-.... ++++...+-+ +.|+
T Consensus 142 ~~~~~~~~~~~~~~~~g~~~~K~Kvg~~~~~~d~~~v~avr~~-------~g~~~~l~vDaN~~-~~~~~A~~~~-~~l~ 212 (370)
T 2chr_A 142 DTKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNS-------LGSKAYLRVDVNQA-WDEQVASVYI-PELE 212 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHH-------TTTTSEEEEECTTC-CCTHHHHHHH-HHHH
T ss_pred chhhhHHHHHHHHhhcccceeecccccCChHHHHHHHHHHHHh-------cCCCcEEEecCCCC-CCHHHHHHHH-HHHH
Confidence 34556667777777889887754333322 1 1122344443 23444454444222 2334433322 2233
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~ 195 (263)
. .++.++..|... +-++.+.+|++.-.|. +.|=+-++...+.++++...++
T Consensus 213 ~-----~~~~~iEeP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d-- 264 (370)
T 2chr_A 213 A-----LGVELIEQPVGR---------------------ENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVD-- 264 (370)
T ss_dssp T-----TTCCEEECCSCS---------------------SCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCS--
T ss_pred h-----cCCceecCCCCh---------------------hhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCc--
Confidence 3 466777777421 1245778887765553 4556678899999998876555
Q ss_pred eeccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 196 VNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 196 ~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|....-+ ..-.++...|+++|+.++..+.+.+
T Consensus 265 ~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~ 301 (370)
T 2chr_A 265 VFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDS 301 (370)
T ss_dssp EECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCC
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCccc
Confidence 666665432 1225789999999999988776654
No 166
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=33.63 E-value=1.1e+02 Score=24.66 Aligned_cols=66 Identities=9% Similarity=0.109 Sum_probs=41.5
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHhCC-CCCeeecc------------------c---cCC--CCCcHHHHHHHHh
Q 024751 161 MEECQRHGLTKSIGVSNFSPKKIETILAFAT-IPPTVNQV------------------E---MNP--AWQQRKLVEFCKS 216 (263)
Q Consensus 161 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~~~q~------------------~---~~~--~~~~~~~i~~~~~ 216 (263)
++.+++.|....+=+++|+.+.+.++.+... ++.....- . +++ ..-..++++.|++
T Consensus 123 ~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 202 (250)
T 3ks6_A 123 IAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADAGLMAQVQA 202 (250)
T ss_dssp HHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchhhCCHHHHHHHHH
Confidence 3344556777788899999999888877543 22111100 0 011 0123578999999
Q ss_pred CCceEEEccC
Q 024751 217 KSIIVTAFSP 226 (263)
Q Consensus 217 ~gi~v~a~sp 226 (263)
+|+.|.+|.+
T Consensus 203 ~G~~V~~WTv 212 (250)
T 3ks6_A 203 AGLDFGCWAA 212 (250)
T ss_dssp TTCEEEEECC
T ss_pred CCCEEEEEeC
Confidence 9999999964
No 167
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=33.22 E-value=75 Score=26.51 Aligned_cols=103 Identities=13% Similarity=0.060 Sum_probs=56.0
Q ss_pred CChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHH
Q 024751 102 AHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPK 181 (263)
Q Consensus 102 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~ 181 (263)
.+.+.. ..+-+.|.++|+++|.+-....|... + . +.+.++.+..+.+...++..++. .+..
T Consensus 24 ~~~e~k-~~i~~~L~~~Gv~~IE~g~~~~~~~~-p--------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~ 84 (298)
T 2cw6_A 24 VSTPVK-IKLIDMLSEAGLSVIETTSFVSPKWV-P--------------Q--MGDHTEVLKGIQKFPGINYPVLT-PNLK 84 (298)
T ss_dssp CCHHHH-HHHHHHHHHTTCSEECCEECCCTTTC-G--------------G--GTTHHHHHHHSCCCTTCBCCEEC-CSHH
T ss_pred CCHHHH-HHHHHHHHHcCcCEEEECCCcCcccc-c--------------c--cCCHHHHHHHHhhCCCCEEEEEc-CCHH
Confidence 444443 35666788999999998765444210 1 0 11222333344333334444444 4677
Q ss_pred HHHHHHHhCCCCCeeeccccCCCC--------------CcHHHHHHHHhCCceEEEc
Q 024751 182 KIETILAFATIPPTVNQVEMNPAW--------------QQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 182 ~l~~~~~~~~~~~~~~q~~~~~~~--------------~~~~~i~~~~~~gi~v~a~ 224 (263)
.++++++. .++.+-+-...|..+ .-.+.+++++++|+.+..+
T Consensus 85 ~i~~a~~a-g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 85 GFEAAVAA-GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp HHHHHHHT-TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHC-CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 78888774 444333322222211 0135799999999998643
No 168
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=33.08 E-value=85 Score=22.49 Aligned_cols=63 Identities=16% Similarity=0.185 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEE
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a 223 (263)
..+.+.|...++.|++. . ...+..+.++......++.--..++......+..+|++++|+++-
T Consensus 14 ~~i~~~L~lA~kagkl~-~-----G~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~ 76 (124)
T 2fc3_A 14 EKAYEAVKRARETGRIK-K-----GTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVY 76 (124)
T ss_dssp HHHHHHHHHHHHHSEEE-E-----SHHHHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhCCcc-C-----CHHHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEE
Confidence 34556666666777642 2 357778888888888877777776654346788899999999754
No 169
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=32.93 E-value=2.2e+02 Score=23.87 Aligned_cols=94 Identities=12% Similarity=0.109 Sum_probs=58.9
Q ss_pred HHHHHHHHHHc-CCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCC
Q 024751 157 VWEAMEECQRH-GLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWG 235 (263)
Q Consensus 157 ~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~ 235 (263)
....++.++++ +. -|.|-+++++.++++++.+. ..+| ..+......++++.++++|..++.+--- |....
T Consensus 103 vvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa--~iIN--dvsg~~~d~~m~~~aa~~g~~vVlmh~~---G~p~y 173 (297)
T 1tx2_A 103 VVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGA--HIIN--DIWGAKAEPKIAEVAAHYDVPIILMHNR---DNMNY 173 (297)
T ss_dssp HHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTC--CEEE--ETTTTSSCTHHHHHHHHHTCCEEEECCC---SCCCC
T ss_pred HHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCC--CEEE--ECCCCCCCHHHHHHHHHhCCcEEEEeCC---CCCCc
Confidence 44444666554 43 47888999999999999842 3344 3444433568999999999999998652 33210
Q ss_pred CCCCCC-----cHHHHHHHHHhCCCchhhc
Q 024751 236 TNQVMN-----NEALKQIAALQQGETEREL 260 (263)
Q Consensus 236 ~~~~l~-----~~~l~~ia~~~~~t~~~~~ 260 (263)
..... -....+.|.+.|+.+++++
T Consensus 174 -~d~v~ev~~~l~~~i~~a~~~GI~~~~Ii 202 (297)
T 1tx2_A 174 -RNLMADMIADLYDSIKIAKDAGVRDENII 202 (297)
T ss_dssp -SSHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred -chHHHHHHHHHHHHHHHHHHcCCChhcEE
Confidence 00000 1234566778888877664
No 170
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=32.09 E-value=2.2e+02 Score=23.65 Aligned_cols=51 Identities=18% Similarity=0.228 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHhCCCCCeeeccccCCCCC------cHHHHHHHHhCCceEEEccCCC
Q 024751 178 FSPKKIETILAFATIPPTVNQVEMNPAWQ------QRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 178 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~~------~~~~i~~~~~~gi~v~a~spl~ 228 (263)
.+.+.++++++..+.+.+++....|+.-. -.++.+.|+++|+.++.-...+
T Consensus 147 ~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 203 (391)
T 3dzz_A 147 VNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHG 203 (391)
T ss_dssp CCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 57888888886444444443333343211 1568899999999999876665
No 171
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=32.07 E-value=59 Score=26.09 Aligned_cols=66 Identities=11% Similarity=0.143 Sum_probs=42.5
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHhCC-CCCeeec----------cccCCCC-------CcHHHHHHHHhCCceEE
Q 024751 161 MEECQRHGLTKSIGVSNFSPKKIETILAFAT-IPPTVNQ----------VEMNPAW-------QQRKLVEFCKSKSIIVT 222 (263)
Q Consensus 161 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~~~q----------~~~~~~~-------~~~~~i~~~~~~gi~v~ 222 (263)
++.+++.|....+=+++|+.+.+.++.+... ++....- ..+..+. ...++++.|+++|+.|.
T Consensus 121 ~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~v~ 200 (238)
T 3no3_A 121 VQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSN 200 (238)
T ss_dssp HHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTCEEE
T ss_pred HHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHCCCEEE
Confidence 3445566777888999999999998887653 2211110 0111010 12368899999999999
Q ss_pred EccC
Q 024751 223 AFSP 226 (263)
Q Consensus 223 a~sp 226 (263)
+|.+
T Consensus 201 ~WTV 204 (238)
T 3no3_A 201 VWTV 204 (238)
T ss_dssp EECC
T ss_pred EECC
Confidence 9964
No 172
>3qp1_A CVIR transcriptional regulator; quorum sensing, agonist, antagonist, LUXR, acylated homoseri lactone, transcription factor; HET: HL6; 1.55A {Chromobacterium violaceum} PDB: 3qp2_A* 3qp4_A* 3qp8_A*
Probab=32.01 E-value=1.6e+02 Score=22.17 Aligned_cols=91 Identities=9% Similarity=0.057 Sum_probs=61.9
Q ss_pred CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc---EEEecC
Q 024751 101 DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK---SIGVSN 177 (263)
Q Consensus 101 ~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir---~iGvs~ 177 (263)
..+.+.+.+.+++..+.+|.+++=+..+..+... ... .+-++|
T Consensus 29 a~s~~~l~~~l~~~~~~~Gf~~~~y~~~~~~~~~----------------------------------~~~~~~~~~~~n 74 (182)
T 3qp1_A 29 IETENELKAFLDQVLSQAPSERLLLALGRLNNQN----------------------------------QIQRLERVLNVS 74 (182)
T ss_dssp CCSHHHHHHHHHHHHTTSSCSEEEEEEEEECTTS----------------------------------CEEEEEEEEESS
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEeecCCCcc----------------------------------cccchhhhhhcC
Confidence 4467899999999999999888766665544210 112 267899
Q ss_pred CCHHHHHHHHHhC--CCCCeeeccccCC--CC-----------CcHHHHHHHHhCCc----eEEEccC
Q 024751 178 FSPKKIETILAFA--TIPPTVNQVEMNP--AW-----------QQRKLVEFCKSKSI----IVTAFSP 226 (263)
Q Consensus 178 ~~~~~l~~~~~~~--~~~~~~~q~~~~~--~~-----------~~~~~i~~~~~~gi----~v~a~sp 226 (263)
|+.+.++...+.. .++|++.... +. +. .+..+++.++++|+ .+-.+.|
T Consensus 75 yP~~W~~~Y~~~~y~~~DPvv~~~~-~~~p~~W~~~~~~~~~~~~~~~~~~a~~~Gl~~G~tvp~~~~ 141 (182)
T 3qp1_A 75 YPSDWLDQYMKENYAQHDPILRIHL-GQGPVMWEERFNRAKGAEEKRFIAEATQNGMGSGITFSAASE 141 (182)
T ss_dssp SCHHHHHHHHHTTGGGTCGGGGSCT-TSCCEEHHHHHHTCCSHHHHHHHHHHHHTTCSSEEEEEEEET
T ss_pred CCHHHHHHHHHCCCcccCcchHhhc-CCCCEecCchhhcccChHHHHHHHHHHHcCCCceEEEEeecC
Confidence 9999888887753 4888876655 42 21 11568888998876 4444445
No 173
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=31.86 E-value=2.4e+02 Score=24.09 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=21.4
Q ss_pred HHHHHHcCCccEEEecCC-CHHHHHHHHHhCCCC
Q 024751 161 MEECQRHGLTKSIGVSNF-SPKKIETILAFATIP 193 (263)
Q Consensus 161 l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~~~ 193 (263)
+..+++.=.+--|++..+ +++..+++++....+
T Consensus 287 ~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD 320 (363)
T 3l5l_A 287 AERVRREAKLPVTSAWGFGTPQLAEAALQANQLD 320 (363)
T ss_dssp HHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCS
T ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCcc
Confidence 334444334666777765 688888888876555
No 174
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=31.65 E-value=2.7e+02 Score=24.54 Aligned_cols=94 Identities=10% Similarity=0.063 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcC--CccEEEecC--CCH
Q 024751 105 DLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHG--LTKSIGVSN--FSP 180 (263)
Q Consensus 105 ~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G--~ir~iGvs~--~~~ 180 (263)
..+.+.+.+.|+.+ +++++..|... +-|+.+.+|.++- .|.-+|=-. ++.
T Consensus 275 ~~~~~~~~~~l~~y-----~i~~iEdPl~~---------------------~D~~g~~~l~~~~g~~ipI~gDe~~v~~~ 328 (432)
T 2ptz_A 275 EQLRETYCKWAHDY-----PIVSIEDPYDQ---------------------DDFAGFAGITEALKGKTQIVGDDLTVTNT 328 (432)
T ss_dssp HHHHHHHHHHHHHS-----CEEEEECCSCT---------------------TCHHHHHHHHHHTTTTSEEEESTTTTTCH
T ss_pred HHHHHHHHHHHHhC-----CceEEECCCCc---------------------chHHHHHHHHHhcCCCCeEEecCcccCCH
Confidence 33443344555543 68888888431 1256666666653 555455333 678
Q ss_pred HHHHHHHHhCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEE-ccC
Q 024751 181 KKIETILAFATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTA-FSP 226 (263)
Q Consensus 181 ~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a-~sp 226 (263)
+.+.++++....+ ++|+..+-+ ..-.+++..|+++|+.++. +..
T Consensus 329 ~~~~~~i~~~a~d--~i~ik~~~~GGitea~~i~~lA~~~g~~v~~~h~~ 376 (432)
T 2ptz_A 329 ERIKMAIEKKACN--SLLLKINQIGTISEAIASSKLCMENGWSVMVSHRS 376 (432)
T ss_dssp HHHHHHHHTTCCS--EEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHcCCCC--EEEecccccCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 9999999876655 666665432 2235799999999999965 444
No 175
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=31.65 E-value=1.9e+02 Score=22.79 Aligned_cols=101 Identities=19% Similarity=0.094 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHcCCcEE---eCCCCcCCHHH---HHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHH
Q 024751 42 ESAMKSAVLESIKLGYRHF---DTASLYGTERA---LGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSL 115 (263)
Q Consensus 42 ~~~~~~~l~~A~~~Gi~~~---DtA~~Ygse~~---lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL 115 (263)
.+.+..+.++.++.|.+.| -....+ .... +-+++++. +. +- ... +.....+.+...+.+++.|
T Consensus 103 ~~~g~~a~~~L~~~G~~~i~~i~~~~~~-~~~R~~gf~~~l~~~---~~--~~---~~~--~~~~~~~~~~~~~~~~~~l 171 (280)
T 3gyb_A 103 FRGAEIATKHLIDLGHTHIAHLRVGSGA-GLRRFESFEATMRAH---GL--EP---LSN--DYLGPAVEHAGYTETLALL 171 (280)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECCSSHH-HHHHHHHHHHHHHHT---TC--CC---EEC--CCCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCeEEEEeCCCch-HHHHHHHHHHHHHHc---Cc--CC---Ccc--cccCCCCHHHHHHHHHHHH
Confidence 4456677777788887633 222222 2222 22233332 32 11 111 1233455677778888887
Q ss_pred HHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCC-----ccEEEecCC
Q 024751 116 KTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGL-----TKSIGVSNF 178 (263)
Q Consensus 116 ~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~-----ir~iGvs~~ 178 (263)
++- ..+|.++..+. ..+..+++.|++.|+ |.-+|+-+.
T Consensus 172 ~~~--~~~~ai~~~~d-----------------------~~a~g~~~al~~~g~~vP~di~vvg~d~~ 214 (280)
T 3gyb_A 172 KEH--PEVTAIFSSND-----------------------ITAIGALGAARELGLRVPEDLSIIGYDNT 214 (280)
T ss_dssp HHC--TTCCEEEESSH-----------------------HHHHHHHHHHHHHTCCTTTTCEEEEESCC
T ss_pred hCC--CCCCEEEECCh-----------------------HHHHHHHHHHHHcCCCCCCeeEEEEECCc
Confidence 763 45788887642 445666777777775 455565543
No 176
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=31.31 E-value=40 Score=29.48 Aligned_cols=41 Identities=17% Similarity=0.090 Sum_probs=31.8
Q ss_pred HHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHH----hCCCchhhcc
Q 024751 208 RKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAAL----QQGETERELG 261 (263)
Q Consensus 208 ~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~----~~~t~~~~~~ 261 (263)
.+++..++++|+.+..-|-= ....++.+|++ |++.+++|+|
T Consensus 227 ~eLi~~L~~~G~~v~IVSgg-------------~~~~v~~ia~~lg~~y~ip~~~Vig 271 (385)
T 4gxt_A 227 VDLYRSLEENGIDCYIVSAS-------------FIDIVRAFATDTNNNYKMKEEKVLG 271 (385)
T ss_dssp HHHHHHHHHTTCEEEEEEEE-------------EHHHHHHHHHCTTSSCCCCGGGEEE
T ss_pred HHHHHHHHHCCCeEEEEcCC-------------cHHHHHHHHHHhCcccCCCcceEEE
Confidence 78999999999998885532 23578889987 4577888876
No 177
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.10 E-value=1.9e+02 Score=24.24 Aligned_cols=86 Identities=9% Similarity=-0.042 Sum_probs=53.0
Q ss_pred EEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcH---HHHHHHHhCCceEEEccCCCCCCCCCCC-CCCCCcHHHHH
Q 024751 172 SIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQR---KLVEFCKSKSIIVTAFSPLGAVGSSWGT-NQVMNNEALKQ 247 (263)
Q Consensus 172 ~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~---~~i~~~~~~gi~v~a~spl~~~G~l~~~-~~~l~~~~l~~ 247 (263)
-|-|=++.++.++..++.+.-.+.+|- .|....+. ++++.|+++|..++.+.--. +|..... ........+.+
T Consensus 86 pisIDT~~~~V~eaaL~~~~Ga~iINd--Is~~~~d~~~~~~~~l~a~~ga~vV~mh~d~-~G~p~t~~~~~~i~~r~~~ 162 (300)
T 3k13_A 86 PVMIDSSKWEVIEAGLKCLQGKSIVNS--ISLKEGEEVFLEHARIIKQYGAATVVMAFDE-KGQADTAARKIEVCERAYR 162 (300)
T ss_dssp CEEEECSCHHHHHHHHHHCSSCCEEEE--ECSTTCHHHHHHHHHHHHHHTCEEEEESEET-TEECCSHHHHHHHHHHHHH
T ss_pred eEEEeCCCHHHHHHHHHhcCCCCEEEe--CCcccCChhHHHHHHHHHHhCCeEEEEeeCC-CCCCCCHHHHHHHHHHHHH
Confidence 477778999999999996422455653 33333232 79999999999999876432 2332110 00111233444
Q ss_pred HH-HHhCCCchhhc
Q 024751 248 IA-ALQQGETEREL 260 (263)
Q Consensus 248 ia-~~~~~t~~~~~ 260 (263)
.+ .++|+.++.++
T Consensus 163 ~~~~~~Gi~~~~Ii 176 (300)
T 3k13_A 163 LLVDKVGFNPHDII 176 (300)
T ss_dssp HHHHHTCCCGGGEE
T ss_pred HHHHHcCCCHHHEE
Confidence 54 78999888765
No 178
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=30.71 E-value=2.8e+02 Score=24.48 Aligned_cols=122 Identities=15% Similarity=0.139 Sum_probs=72.0
Q ss_pred HHHHHHHHhcCCCCCCccEEEeeCCC-------------CCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCcc
Q 024751 73 GEAIAEALKLGLVASREELFITTKLW-------------CSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEK 139 (263)
Q Consensus 73 G~al~~~~~~~~~~~R~~~~I~tK~~-------------~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~ 139 (263)
-+++++. |.- .-+++.|..-.. ....+++...+-+++.++.+ +++++..|.+.
T Consensus 225 ~~Air~a---gy~-~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y-----~i~~IEdPl~~----- 290 (428)
T 3tqp_A 225 LEAIEDA---NYV-PGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKY-----PVISIEDGLSE----- 290 (428)
T ss_dssp HHHHHHT---TCC-BTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHS-----CEEEEECCSCT-----
T ss_pred HHHHHHh---hcc-cCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhc-----ccceEeCCCCc-----
Confidence 4566654 431 235677665542 12345666666666656654 58888887431
Q ss_pred ccCCCCccccccCCHHHHHHHHHHHHHc-C-CccEEEe--cCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHH
Q 024751 140 LRNDIPEEDLVSLDYNGVWEAMEECQRH-G-LTKSIGV--SNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVE 212 (263)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGv--s~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~ 212 (263)
+-|+.+.+|.+. + .|.-+|= +-.+++.+.++++....+ ++|+..+-+- .-.+++.
T Consensus 291 ----------------dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d--~i~iKv~~iGGiTealkia~ 352 (428)
T 3tqp_A 291 ----------------NDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIAN--AILVKLNQIGTLTETLATVG 352 (428)
T ss_dssp ----------------TCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCS--EEEECHHHHCCHHHHHHHHH
T ss_pred ----------------ccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCC--EEEecccccCCHHHHHHHHH
Confidence 124455555543 2 3444453 233889999999876655 6666654322 2357899
Q ss_pred HHHhCCce-EEEccC
Q 024751 213 FCKSKSII-VTAFSP 226 (263)
Q Consensus 213 ~~~~~gi~-v~a~sp 226 (263)
.|+++|+. ++.+.+
T Consensus 353 lA~~~G~~~~v~H~s 367 (428)
T 3tqp_A 353 LAKSNKYGVIISHRS 367 (428)
T ss_dssp HHHHTTCEEEEECCS
T ss_pred HHHHcCCeEEEeCCC
Confidence 99999999 455543
No 179
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=29.98 E-value=90 Score=22.15 Aligned_cols=63 Identities=14% Similarity=0.179 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEE
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a 223 (263)
....+.|...++.|++. .| ..+..+.++......++.--..++..-...+..+|++++|+++-
T Consensus 13 ~~i~~~L~lA~kag~l~-~G-----~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~ 75 (119)
T 1rlg_A 13 NEALSLLEKVRESGKVK-KG-----TNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIY 75 (119)
T ss_dssp HHHHHHHHHHHHHSEEE-ES-----HHHHHHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHhCCee-EC-----HHHHHHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEE
Confidence 44556666666777652 23 56778888888888878777777755456788899999999754
No 180
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=29.68 E-value=1.3e+02 Score=26.21 Aligned_cols=72 Identities=8% Similarity=-0.049 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHc-----CCc-cEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEcc
Q 024751 155 NGVWEAMEECQRH-----GLT-KSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 155 ~~~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~s 225 (263)
.+.|+.+.+|.+. -.| -..|=+-++.+.+.++++...++ ++|+..+-+- .-.+++.+|+++|+.++..+
T Consensus 282 ~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d--~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kcz_A 282 QKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGH--MVQIKTPDLGGVNNIADAIMYCKANGMGAYCGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSS--EEEECTGGGSSTHHHHHHHHHHHHTTCEEEECC
T ss_pred cccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCC--EEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 4567778777775 222 23344567888899988866555 6776665432 23579999999999999865
Q ss_pred -CCC
Q 024751 226 -PLG 228 (263)
Q Consensus 226 -pl~ 228 (263)
.+.
T Consensus 360 ~~~e 363 (413)
T 1kcz_A 360 TCNE 363 (413)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 443
No 181
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=29.63 E-value=2.5e+02 Score=25.08 Aligned_cols=117 Identities=7% Similarity=-0.003 Sum_probs=71.2
Q ss_pred hhHHHHHHHHHHH----HhCC-CcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCC
Q 024751 104 RDLVVPALKKSLK----TLQI-EYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNF 178 (263)
Q Consensus 104 ~~~i~~~~~~sL~----~Lg~-~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 178 (263)
.+.+...++..-+ +.|- -.+|++.++.-... .+......+.+++ -.=--+-|-++
T Consensus 104 e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~d-------------------pe~~~~vVk~V~e-~~dvPL~IDS~ 163 (446)
T 4djd_C 104 SEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADD-------------------PAAFKAAVASVAA-ATQLNLVLMAD 163 (446)
T ss_dssp HHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSSS-------------------THHHHHHHHHHHT-TCCSEEEEECS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCCC-------------------HHHHHHHHHHHHH-hCCCCEEEecC
Confidence 3455555555421 2231 15789999865211 2333444444443 22235777789
Q ss_pred CHHHHHHHHHhC-CCCCeeeccccCCCCCcHHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhCC
Q 024751 179 SPKKIETILAFA-TIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQG 254 (263)
Q Consensus 179 ~~~~l~~~~~~~-~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~ 254 (263)
+++.+++.++.+ ...+.++-... ..-..+.+.+.++|..++++++ . +-.-..+.+.+.++|+
T Consensus 164 dpevleaALea~a~~~plI~sat~---dn~e~m~~lAa~y~~pVi~~~~--d---------l~~lkelv~~a~~~GI 226 (446)
T 4djd_C 164 DPDVLKEALAGVADRKPLLYAATG---ANYEAMTALAKENNCPLAVYGN--G---------LEELAELVDKIVALGH 226 (446)
T ss_dssp CHHHHHHHHGGGGGGCCEEEEECT---TTHHHHHHHHHHTTCCEEEECS--S---------HHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhhcCcCCeeEecch---hhHHHHHHHHHHcCCcEEEEec--c---------HHHHHHHHHHHHHCCC
Confidence 999999999976 45666654331 1124799999999999999976 1 0112446777777776
No 182
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=29.21 E-value=1.1e+02 Score=22.30 Aligned_cols=38 Identities=11% Similarity=-0.071 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCC
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATI 192 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~ 192 (263)
...+..|+++.++..+.-||||..+.+.+.++++..++
T Consensus 63 ~~~~~~l~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 100 (166)
T 3p7x_A 63 DQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGL 100 (166)
T ss_dssp HHHHHHHHHHSCTTTSEEEEEESSCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhcCCCEEEEEECCCHHHHHHHHHHcCC
Confidence 34566788887766689999999999999888887665
No 183
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=29.06 E-value=1.7e+02 Score=24.24 Aligned_cols=67 Identities=3% Similarity=-0.003 Sum_probs=43.5
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHhCC-CCCeeecc-------------------c-cCCCCC--cHHHHHHHHhC
Q 024751 161 MEECQRHGLTKSIGVSNFSPKKIETILAFAT-IPPTVNQV-------------------E-MNPAWQ--QRKLVEFCKSK 217 (263)
Q Consensus 161 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~~~~~q~-------------------~-~~~~~~--~~~~i~~~~~~ 217 (263)
++.+++.|....+=+++|+.+.+.++.+... +......- . +++... ..++++.|+++
T Consensus 148 ~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~ 227 (292)
T 3mz2_A 148 AQLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHER 227 (292)
T ss_dssp HHHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHC
Confidence 3445556777888899999999988877653 22111100 0 011111 25799999999
Q ss_pred CceEEEccCC
Q 024751 218 SIIVTAFSPL 227 (263)
Q Consensus 218 gi~v~a~spl 227 (263)
|+.|.+|.+-
T Consensus 228 G~~V~vWTv~ 237 (292)
T 3mz2_A 228 GVMCMISTAP 237 (292)
T ss_dssp TBCEEEECTT
T ss_pred CCEEEEEeCC
Confidence 9999999754
No 184
>1vpy_A Protein (hypothetical protein EF0366); TIM alpha/beta barrel fold, structural genomics, joint cente structural genomics, JCSG; 2.52A {Enterococcus faecalis} SCOP: c.1.32.1 PDB: 1ztv_A
Probab=29.02 E-value=2.5e+02 Score=23.31 Aligned_cols=98 Identities=15% Similarity=0.269 Sum_probs=56.7
Q ss_pred cccCeeceeccccC--CChHHHHHHHHHHHHcCCcEEeCCC-CcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC
Q 024751 26 RKMPVIGLGSAVDN--IDESAMKSAVLESIKLGYRHFDTAS-LYG--TERALGEAIAEALKLGLVASREELFITTKLWCS 100 (263)
Q Consensus 26 ~~v~~iglG~~~~~--~~~~~~~~~l~~A~~~Gi~~~DtA~-~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~ 100 (263)
..|-.||.+.|+.. . .-...+.|..+.+ -.+.++.-. .|+ +++.+..+.++ ..+++.-+.|.+..
T Consensus 11 ~~~i~iG~sgWs~~~w~-~~~~~~~L~~Ya~-~F~tVEiNsTFY~~p~~~t~~~W~~~--------tP~~F~F~vKa~r~ 80 (289)
T 1vpy_A 11 HHMIRLGLTSFSEHDYL-TGKKRSTLYEYAS-HLPLVEMDTAYYGIPPKERVAEWVKA--------VPENFRFVMKVYSG 80 (289)
T ss_dssp CCEEEEEESTTC-----------CCHHHHHH-HCSEEEECHHHHSCCCHHHHHHHHHT--------SCTTCEEEEECCTT
T ss_pred cceEEEecCCCCChhhc-CCChhhHHHHHHh-hCCEEEECccccCCCCHHHHHHHHHh--------CCCCcEEEEEechh
Confidence 45667777777653 1 1112223444433 356655533 476 78888888775 46889999998532
Q ss_pred -----CC----Ch-hHHHHHHHHHHHHhC-CCcccEEEeecCCC
Q 024751 101 -----DA----HR-DLVVPALKKSLKTLQ-IEYVDLYLIHWPMS 133 (263)
Q Consensus 101 -----~~----~~-~~i~~~~~~sL~~Lg-~~~iDl~~lh~p~~ 133 (263)
.. +. +.+.+.+.+.++-|+ -+++..+++.-|-.
T Consensus 81 iTH~~rl~~~~~~~~~~~~~F~~~~~pL~~~~kLG~vL~Q~Pps 124 (289)
T 1vpy_A 81 ISCQGEWQTYYASEEEMITAFLESMAPLIESKKLFAFLVQFSGT 124 (289)
T ss_dssp TTTCSCGGGTCSSHHHHHHHHHHHTHHHHTTTCEEEEEEECCTT
T ss_pred eecccccCCccchhHHHHHHHHHHHHhhccCCCEEEEEEEcCCC
Confidence 10 11 233355666677772 27899999998743
No 185
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=28.39 E-value=2.8e+02 Score=23.76 Aligned_cols=152 Identities=13% Similarity=-0.032 Sum_probs=83.2
Q ss_pred ChHHHHHHHHHHHH-cCCcEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIK-LGYRHFDTASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 41 ~~~~~~~~l~~A~~-~Gi~~~DtA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
++++..+....+++ .|++.|-.=-.... +...=+++|+. -.+++-|...... .++++...+- -+.|+
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a-------~g~~~~l~vDaN~-~~~~~~A~~~-~~~l~ 217 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEA-------LGDRASIRVDVNQ-AWDAATGAKG-CRELA 217 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHH-------TCTTCEEEEECTT-CBCHHHHHHH-HHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHH-------cCCCCeEEEECCC-CCCHHHHHHH-HHHHh
Confidence 35555555566665 68988753221111 22233455554 2344555555532 2344433322 23445
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLT-KSIGVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~ 195 (263)
.++ +.++..|.+. +-++.+.+|++.-.| -..|=+-++...+.++++...++
T Consensus 218 ~~~-----i~~iEeP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d-- 269 (381)
T 3fcp_A 218 AMG-----VDLIEQPVSA---------------------HDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTG-- 269 (381)
T ss_dssp HTT-----CSEEECCBCT---------------------TCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCS--
T ss_pred hcC-----ccceeCCCCc---------------------ccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCC--
Confidence 544 4556665321 124567777765333 24455678889999999876655
Q ss_pred eeccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 196 VNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 196 ~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|+...-+ ..-.++...|+++|+.++..+.+.+
T Consensus 270 ~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 306 (381)
T 3fcp_A 270 AYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEG 306 (381)
T ss_dssp EEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCC
T ss_pred EEEecccccCCHHHHHHHHHHHHHcCCceecCCCCcc
Confidence 666665432 2336789999999999988776643
No 186
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=28.04 E-value=2.1e+02 Score=22.27 Aligned_cols=88 Identities=8% Similarity=-0.036 Sum_probs=52.8
Q ss_pred HHHHHcCCccEEEecCC-------CHHHHHHHHHhCCCCCeeeccccCCCC--C----------cHHHHHHHHhCCceEE
Q 024751 162 EECQRHGLTKSIGVSNF-------SPKKIETILAFATIPPTVNQVEMNPAW--Q----------QRKLVEFCKSKSIIVT 222 (263)
Q Consensus 162 ~~l~~~G~ir~iGvs~~-------~~~~l~~~~~~~~~~~~~~q~~~~~~~--~----------~~~~i~~~~~~gi~v~ 222 (263)
....+. .|--||--.. +...++.+.+ .++. ..++++.+. . -..++..|++.|+.++
T Consensus 90 ~~a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e-~gv~---lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~iv 164 (212)
T 1v77_A 90 RYSIEK-GVDAIISPWVNRKDPGIDHVLAKLMVK-KNVA---LGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRF 164 (212)
T ss_dssp HHHHHT-TCSEEECTTTTSSSCSCCHHHHHHHHH-HTCE---EEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHhC-CCCEEecccccccCCCCCHHHHHHHHH-CCeE---EEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEE
Confidence 345566 7888875432 2433333433 3443 334444332 1 0368999999999988
Q ss_pred EccCCCCCCCCCCCCCCCCcHHHHHHHHHhCCCchhhc
Q 024751 223 AFSPLGAVGSSWGTNQVMNNEALKQIAALQQGETEREL 260 (263)
Q Consensus 223 a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~t~~~~~ 260 (263)
.-|=-.. ...+-.-..+.+++...|.+.+++.
T Consensus 165 isSDAh~------~~~v~~~~~~~~l~~~~G~~~e~~~ 196 (212)
T 1v77_A 165 LTSSAQE------KWDVRYPRDLISLGVVIGMEIPQAK 196 (212)
T ss_dssp EECCCSS------GGGCCCHHHHHHHHHHTTCCHHHHH
T ss_pred EeCCCCC------hhhcCCHHHHHHHHHHcCCCHHHHH
Confidence 7654443 2333344567899999999887765
No 187
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=28.00 E-value=63 Score=28.26 Aligned_cols=56 Identities=9% Similarity=-0.075 Sum_probs=38.7
Q ss_pred CCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCC--CCcHHHHHHHHhCCceEEEccC
Q 024751 168 GLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPA--WQQRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 168 G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~--~~~~~~i~~~~~~gi~v~a~sp 226 (263)
+.--+.|=+.+ ...+.++++...++ ++|...+-. ..-..+.+.|+++|+.+...++
T Consensus 256 ~ipIa~gE~~~-~~~~~~li~~~a~d--ii~~d~~~GGitea~kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 256 NVLIADGEGLA-SPHLIEWATRGRVD--VLQYDIIWPGFTHWMELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp CCEEEECCSSC-CTTHHHHHHTTSCC--EECCBTTTBCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CCcEECCCccc-HHHHHHHHHcCCCc--EEEeCCCCCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 44445566666 66788888876655 777776531 1125789999999999987765
No 188
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=27.81 E-value=1e+02 Score=21.00 Aligned_cols=60 Identities=10% Similarity=0.053 Sum_probs=37.8
Q ss_pred HHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 158 WEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 158 ~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
.+.|...++.|++. . ...+..++++......++.--.. +......+-.+|++++|+++.|
T Consensus 5 ~~~L~la~kagkl~-~-----G~~~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 5 AFELRKAQDTGKIV-M-----GARKSIQYAKMGGAKLIIVARNA-RPDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp HHHHHHHHHHSEEE-E-----SHHHHHHHHHHTCCSEEEEETTS-CHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCEe-E-----CHHHHHHHHHcCCCcEEEEeCCC-CHHHHHHHHHHHHhcCCCEEEe
Confidence 34555666666642 2 34677777787777766655442 2222256778899999987765
No 189
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=27.61 E-value=20 Score=26.53 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=18.1
Q ss_pred cEEeCCCCcCCHHHHHHHHHHH
Q 024751 58 RHFDTASLYGTERALGEAIAEA 79 (263)
Q Consensus 58 ~~~DtA~~Ygse~~lG~al~~~ 79 (263)
-||||++.|+..+.|=.+|+..
T Consensus 44 EFWDT~p~~~Gr~EIW~ALraA 65 (137)
T 2ksn_A 44 EFWDTAPAFEGRKEIWDALKAA 65 (137)
T ss_dssp HHHTTSSTTCCCHHHHHHHHHH
T ss_pred HHHhcCCccCCCHHHHHHHHHH
Confidence 3899999999777777788765
No 190
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=27.54 E-value=2.9e+02 Score=23.68 Aligned_cols=152 Identities=13% Similarity=0.015 Sum_probs=85.6
Q ss_pred ChHHHHHHHHHHHH-cCCcEEeCCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIK-LGYRHFDTASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 41 ~~~~~~~~l~~A~~-~Gi~~~DtA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
++++..+....+++ .|++.|-.=-.... +...=+++|+.+ .+++-|...... .++++...+ +-+.|+
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~-------g~~~~l~vDaN~-~~~~~~A~~-~~~~l~ 218 (382)
T 3dgb_A 148 DTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKAL-------GDSASVRVDVNQ-AWDEAVALR-ACRILG 218 (382)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHH-------GGGSEEEEECTT-CBCHHHHHH-HHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHc-------CCCCeEEEeCCC-CCCHHHHHH-HHHHHh
Confidence 45555555666676 69998754221111 222334555542 234455555432 234443322 223445
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCe
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPT 195 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~ 195 (263)
.++ +.++..|.+. +-++.+.++++.-.|. ..|=+-++...+.++++...++
T Consensus 219 ~~~-----i~~iEqP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d-- 270 (382)
T 3dgb_A 219 GNG-----IDLIEQPISR---------------------NNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAAS-- 270 (382)
T ss_dssp TTT-----CCCEECCBCT---------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCS--
T ss_pred hcC-----cCeeeCCCCc---------------------cCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCC--
Confidence 444 4455555221 1245677777654333 4455678899999999877655
Q ss_pred eeccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 196 VNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 196 ~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
++|+..+-+ ..-..+...|+++|+.++..+.+.+
T Consensus 271 ~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 307 (382)
T 3dgb_A 271 VFALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLEG 307 (382)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCCC
T ss_pred EEEecccccCCHHHHHHHHHHHHHcCCeEeecCCCcc
Confidence 666655432 2235789999999999988776643
No 191
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=27.50 E-value=3.1e+02 Score=23.90 Aligned_cols=97 Identities=14% Similarity=0.068 Sum_probs=55.1
Q ss_pred HHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHH-HHHHcCCccEEEecCCCHHHHHHHH
Q 024751 109 PALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAME-ECQRHGLTKSIGVSNFSPKKIETIL 187 (263)
Q Consensus 109 ~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~l~~~G~ir~iGvs~~~~~~l~~~~ 187 (263)
+++...+..+ +..=|-+++..+.. ...+..+. .+...| ++.+-+-..+.+.+++++
T Consensus 108 ~Ai~~al~al-~~~Gd~Vi~~~~~y---------------------~~~~~~~~~~~~~~G-~~~~~v~~~d~~~l~~ai 164 (430)
T 3ri6_A 108 AAISTAILTL-ARAGDSVVTTDRLF---------------------GHTLSLFQKTLPSFG-IEVRFVDVMDSLAVEHAC 164 (430)
T ss_dssp HHHHHHHHHH-CCTTCEEEEETTCC---------------------HHHHHHHHTHHHHTT-CEEEEECTTCHHHHHHHC
T ss_pred HHHHHHHHHH-hCCCCEEEEcCCCc---------------------hhHHHHHHHHHHHcC-CEEEEeCCCCHHHHHHhh
Confidence 4455555544 23347777776632 23344443 233334 344444444777777776
Q ss_pred HhCCCCCeeeccccCCCCC---cHHHHHHHHhCCceEEEccCCCC
Q 024751 188 AFATIPPTVNQVEMNPAWQ---QRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 188 ~~~~~~~~~~q~~~~~~~~---~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
+. +.+.++.....|+.-. -.++.+.|+++|+.++.-..++.
T Consensus 165 ~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~ 208 (430)
T 3ri6_A 165 DE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTP 208 (430)
T ss_dssp CT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSC
T ss_pred CC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc
Confidence 42 3344444444454332 26799999999999998887765
No 192
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=27.40 E-value=1.7e+02 Score=25.94 Aligned_cols=59 Identities=7% Similarity=-0.030 Sum_probs=34.8
Q ss_pred cCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCC--CCCChhHHHHHHHHHHHHhCCCcccEEEeecCCC
Q 024751 66 YGTERALGEAIAEALKLGLVASREELFITTKLWC--SDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMS 133 (263)
Q Consensus 66 Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~--~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~ 133 (263)
+|.++.+-+++++..+.- +.+-++|.+-... ...|.+.+-+.++ ++++ +.++.++.+..
T Consensus 79 ~Gg~ekL~~~i~~~~~~~---~P~~I~v~~TC~~~iIGdDi~~v~~~~~---~~~~---ipVi~v~~~Gf 139 (460)
T 2xdq_A 79 LNDYEELKRLCLEIKRDR---NPSVIVWIGTCTTEIIKMDLEGLAPKLE---AEIG---IPIVVARANGL 139 (460)
T ss_dssp SCHHHHHHHHHHHHHHHH---CCSEEEEEECHHHHHTTCCHHHHHHHHH---HHHS---SCEEEEECCTT
T ss_pred cCChHHHHHHHHHHHHhc---CCCEEEEECCCHHHHHhhCHHHHHHHHh---hccC---CcEEEEecCCc
Confidence 777666778877664432 3456777777632 2233344444443 3445 68999998754
No 193
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=27.34 E-value=1.2e+02 Score=23.93 Aligned_cols=33 Identities=15% Similarity=0.177 Sum_probs=24.6
Q ss_pred eeceeccccCCChHHHHHHHHHHHHcCCcEEeCCC
Q 024751 30 VIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTAS 64 (263)
Q Consensus 30 ~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~ 64 (263)
+||+-++.+. .....+.++.+-+.|+..++...
T Consensus 11 klg~~~~~~~--~~~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 11 RLGMQSYSFH--LFPLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp EEEEEGGGGT--TSCHHHHHHHHHHTTCCEEEECT
T ss_pred EEEEEecccC--CCCHHHHHHHHHHcCCCEEeecC
Confidence 5677777764 22356788999999999999875
No 194
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=27.31 E-value=57 Score=22.44 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEE
Q 024751 156 GVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 156 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a 223 (263)
.+.+.|.-.++.|++. . ...+..+.++......++.-...++. ....+..+|++++|+++-
T Consensus 5 ki~~~L~la~kagk~v-~-----G~~~v~kai~~gka~lViiA~D~~~~-~~~~i~~~c~~~~ip~~~ 65 (101)
T 3on1_A 5 KWLSLLGLAARARQLL-T-----GEEQVVKAVQNGQVTLVILSSDAGIH-TKKKLLDKCGSYQIPVKV 65 (101)
T ss_dssp HHHHHHHHHHHTTCEE-E-----SHHHHHHHHHTTCCSEEEEETTSCHH-HHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHCCEe-E-----CHHHHHHHHHcCCCcEEEEeCCCCHH-HHHHHHHHHHHcCCCEEE
Confidence 4566777778888863 2 34677888888887777776666552 235688889999999885
No 195
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=27.06 E-value=2.2e+02 Score=22.13 Aligned_cols=159 Identities=11% Similarity=0.005 Sum_probs=76.5
Q ss_pred ccCeeceeccccCCChHHHHHHHHHHHHcCCcEEeCCCC-cCCHHHHHHHHHHHHhcCCCCCCcc-------------EE
Q 024751 27 KMPVIGLGSAVDNIDESAMKSAVLESIKLGYRHFDTASL-YGTERALGEAIAEALKLGLVASREE-------------LF 92 (263)
Q Consensus 27 ~v~~iglG~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~-Ygse~~lG~al~~~~~~~~~~~R~~-------------~~ 92 (263)
.+|.++-|... +.++ +..+++.|...+..... +.....+.++.+.+ + .+. +.
T Consensus 77 ~ipvi~~g~i~---~~~~----~~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~---g----~~~i~~~~~~~~~~g~~~ 142 (253)
T 1h5y_A 77 SIPVLVGGGVR---SLED----ATTLFRAGADKVSVNTAAVRNPQLVALLAREF---G----SQSTVVAIDAKWNGEYYE 142 (253)
T ss_dssp SSCEEEESSCC---SHHH----HHHHHHHTCSEEEESHHHHHCTHHHHHHHHHH---C----GGGEEEEEEEEECSSSEE
T ss_pred CCCEEEECCCC---CHHH----HHHHHHcCCCEEEEChHHhhCcHHHHHHHHHc---C----CCcEEEEEEeecCCCcEE
Confidence 46666555433 3333 46677789888764322 22333455555554 2 222 34
Q ss_pred EeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccE
Q 024751 93 ITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKS 172 (263)
Q Consensus 93 I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 172 (263)
+.++.|..... ....+.+ +.+..+| +|.+.+|..+..... + .. .++.+.++++.-.+.-
T Consensus 143 v~~~~~~~~~~-~~~~e~~-~~~~~~G---~d~i~~~~~~~~g~~---~---------~~----~~~~i~~l~~~~~~pv 201 (253)
T 1h5y_A 143 VYVKGGREATG-LDAVKWA-KEVEELG---AGEILLTSIDRDGTG---L---------GY----DVELIRRVADSVRIPV 201 (253)
T ss_dssp EEETTTTEEEE-EEHHHHH-HHHHHHT---CSEEEEEETTTTTTC---S---------CC----CHHHHHHHHHHCSSCE
T ss_pred EEEeCCeecCC-CCHHHHH-HHHHhCC---CCEEEEecccCCCCc---C---------cC----CHHHHHHHHHhcCCCE
Confidence 45555432111 1222222 2344566 577888865321110 0 00 1344455554444555
Q ss_pred EEecCCC-HHHHHHHHHhCCCCCeeecccc-CCCCCcHHHHHHHHhCCceE
Q 024751 173 IGVSNFS-PKKIETILAFATIPPTVNQVEM-NPAWQQRKLVEFCKSKSIIV 221 (263)
Q Consensus 173 iGvs~~~-~~~l~~~~~~~~~~~~~~q~~~-~~~~~~~~~i~~~~~~gi~v 221 (263)
+.....+ .+.+.++++ .+.+-+++--.+ ..-....++.++++++|+.+
T Consensus 202 ia~GGi~~~~~~~~~~~-~Ga~~v~vgsal~~~~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 202 IASGGAGRVEHFYEAAA-AGADAVLAASLFHFRVLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp EEESCCCSHHHHHHHHH-TTCSEEEESHHHHTTSSCHHHHHHHHHHTTCBC
T ss_pred EEeCCCCCHHHHHHHHH-cCCcHHHHHHHHHcCCCCHHHHHHHHHHcCCCC
Confidence 5555544 578888875 344433322111 11112357888888888754
No 196
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=26.89 E-value=3.3e+02 Score=24.05 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=62.9
Q ss_pred ChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecC--CCH
Q 024751 103 HRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSN--FSP 180 (263)
Q Consensus 103 ~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~ 180 (263)
+++...+.+.+.++. .+++++..|.. .+-|+.+.+|.++..|--.|=-. .++
T Consensus 274 t~~eai~~~~~~l~~-----y~i~~iEdPl~---------------------~dD~~g~~~l~~~~~ipI~gDE~~vt~~ 327 (436)
T 2al1_A 274 TGPQLADLYHSLMKR-----YPIVSIEDPFA---------------------EDDWEAWSHFFKTAGIQIVADDLTVTNP 327 (436)
T ss_dssp CHHHHHHHHHHHHHH-----SCEEEEECCSC---------------------TTCHHHHHHHHTTCCSEEEESTTTTTCH
T ss_pred CHHHHHHHHHHHHHh-----CCcEEEECCCC---------------------CcCHHHHHHHHhcCCCeEEECCcccCCH
Confidence 444444455555554 36888888742 22367888888887775555433 368
Q ss_pred HHHHHHHHhCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEE-ccCC
Q 024751 181 KKIETILAFATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTA-FSPL 227 (263)
Q Consensus 181 ~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a-~spl 227 (263)
+.+.++++....+ ++|+..+-+ ..-.+++..|+++|+.++. +.+.
T Consensus 328 ~~~~~~i~~~a~d--~i~ikv~qiGGitea~~ia~lA~~~g~~~~~sh~sg 376 (436)
T 2al1_A 328 KRIATAIEKKAAD--ALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSG 376 (436)
T ss_dssp HHHHHHHHTTCCS--EEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSB
T ss_pred HHHHHHHHhCCCC--EEEechhhcCCHHHHHHHHHHHHHcCCeEEEecCCC
Confidence 9999999876555 566555432 2235799999999998755 5443
No 197
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=26.75 E-value=3e+02 Score=23.48 Aligned_cols=122 Identities=15% Similarity=0.149 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHHHcC---CcEEeCCCCcCC-HHHHHHHHHHHHhcCCCCCCccEEEeeCCC--CCCCChhHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLG---YRHFDTASLYGT-ERALGEAIAEALKLGLVASREELFITTKLW--CSDAHRDLVVPALKKS 114 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~G---i~~~DtA~~Ygs-e~~lG~al~~~~~~~~~~~R~~~~I~tK~~--~~~~~~~~i~~~~~~s 114 (263)
+.+.-.+++.+..+.- +-.+|.++..++ ...+ .+.+ + .+.-++|.+|.- ......+.+.+.+.+.
T Consensus 57 ~~e~f~~~L~~~~~~~~lil~VvD~~d~~~s~~~~l----~~~l--~---~~piilV~NK~DLl~~~~~~~~~~~~l~~~ 127 (369)
T 3ec1_A 57 DDDDFLSMLHRIGESKALVVNIVDIFDFNGSFIPGL----PRFA--A---DNPILLVGNKADLLPRSVKYPKLLRWMRRM 127 (369)
T ss_dssp --CHHHHHHHHHHHHCCEEEEEEETTCSGGGCCSSH----HHHC--T---TSCEEEEEECGGGSCTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhccCcEEEEEEECCCCCCchhhHH----HHHh--C---CCCEEEEEEChhcCCCccCHHHHHHHHHHH
Confidence 4455666777765432 457888775541 1111 2221 1 355688899983 2333345666667777
Q ss_pred HHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHH-HHHHHh
Q 024751 115 LKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKI-ETILAF 189 (263)
Q Consensus 115 L~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l-~~~~~~ 189 (263)
++.+|....+++.+..-.. ....+.++.+.++.+...|--+|-+|.....+ ..+...
T Consensus 128 ~~~~g~~~~~v~~iSA~~g------------------~gi~~L~~~I~~~~~~~~i~~vG~~nvGKStliN~L~~~ 185 (369)
T 3ec1_A 128 AEELGLCPVDVCLVSAAKG------------------IGMAKVMEAINRYREGGDVYVVGCTNVGKSTFINRIIEE 185 (369)
T ss_dssp HHTTTCCCSEEEECBTTTT------------------BTHHHHHHHHHHHHTTSCEEEECCTTSSHHHHHHHHHHH
T ss_pred HHHcCCCcccEEEEECCCC------------------CCHHHHHHHHHhhcccCcEEEEcCCCCchHHHHHHHHhh
Confidence 7888865456666543321 12788888898888888899999999986554 444443
No 198
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=26.67 E-value=90 Score=22.83 Aligned_cols=64 Identities=11% Similarity=0.076 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
..+.+.|...++.|++. .| ..+..+.++......++.--..++...-..+..+|++++|+++-+
T Consensus 27 ~ki~~~L~lA~kagklv-~G-----~~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v 90 (135)
T 2aif_A 27 NKIINLVQQACNYKQLR-KG-----ANEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFV 90 (135)
T ss_dssp HHHHHHHHHHHHTTCEE-ES-----HHHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHcCCcc-cC-----HHHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEE
Confidence 45667777778888763 23 567788888877776666655555332356888899999998754
No 199
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=26.28 E-value=3.5e+02 Score=24.17 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=58.0
Q ss_pred CChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEE--ecCCC
Q 024751 102 AHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIG--VSNFS 179 (263)
Q Consensus 102 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG--vs~~~ 179 (263)
.+++++.+-.++.++.. +++++-.|-... .-+.|..|.+... .+|.-+| ++..+
T Consensus 281 ~t~~Elid~y~~lle~y-----pIv~IEDPl~~d------------------D~eg~a~Lt~~lg-~~iqIvGDDl~vTn 336 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKY-----PIISVEDPFDQD------------------DFASFSAFTKDVG-EKTQVIGDDILVTN 336 (452)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEECCSCTT------------------CHHHHHHHHHHHT-TTSEEEESTTTTTC
T ss_pred ccHHHHHHHHHHHHhhh-----CceEEecCCChh------------------hHHHHHHHHHhhC-CCeEEEeCccccCC
Confidence 35566666666666653 488888884321 1233444443321 2465566 33457
Q ss_pred HHHHHHHHHhCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEEc
Q 024751 180 PKKIETILAFATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 180 ~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~ 224 (263)
++.+.++++....+ ++++..|-. ..-.+++..|+++|+.++.-
T Consensus 337 ~~~i~~~Ie~~a~n--~IlIKvnQIGgITEalka~~lA~~~G~~vmvs 382 (452)
T 3otr_A 337 ILRIEKALKDKACN--CLLLKVNQIGSVTEAIEACLLAQKSGWGVQVS 382 (452)
T ss_dssp HHHHHHHHHHTCCS--EEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhcCCCC--EEEeeccccccHHHHHHHHHHHHHcCCeEEEe
Confidence 89999998876544 444444322 12257889999999997663
No 200
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=26.14 E-value=3e+02 Score=23.32 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=22.3
Q ss_pred HHHHHHHHcCCccEEEecC-CCHHHHHHHHHhCCCC
Q 024751 159 EAMEECQRHGLTKSIGVSN-FSPKKIETILAFATIP 193 (263)
Q Consensus 159 ~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~ 193 (263)
+.+.++++.-.+--|++.. ++++..+++++....+
T Consensus 278 ~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD 313 (349)
T 3hgj_A 278 PFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSAD 313 (349)
T ss_dssp HHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCce
Confidence 3444555443455666666 4788889998876555
No 201
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=26.13 E-value=2.8e+02 Score=22.95 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=25.4
Q ss_pred HHHHHH-HHHHHcCCccEEEecCCCHHHHHHHHHhC
Q 024751 156 GVWEAM-EECQRHGLTKSIGVSNFSPKKIETILAFA 190 (263)
Q Consensus 156 ~~~~~l-~~l~~~G~ir~iGvs~~~~~~l~~~~~~~ 190 (263)
+..+.+ +.+++.|....+=+++|+.+.+.++.+..
T Consensus 165 ~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~ 200 (313)
T 3l12_A 165 EMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQA 200 (313)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHC
Confidence 334443 44556677788999999999999887754
No 202
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=25.84 E-value=2.5e+02 Score=23.26 Aligned_cols=97 Identities=13% Similarity=0.165 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc-CCccEEEecCCCHHHHHH
Q 024751 107 VVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH-GLTKSIGVSNFSPKKIET 185 (263)
Q Consensus 107 i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~ 185 (263)
-+-.+-+.|.++|+++|++-+ |.. ...-|+.+..+.+. ..++..++.......++.
T Consensus 28 ~K~~i~~~L~~~Gv~~IE~g~---p~~--------------------~~~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~ 84 (293)
T 3ewb_X 28 EKIQIALQLEKLGIDVIEAGF---PIS--------------------SPGDFECVKAIAKAIKHCSVTGLARCVEGDIDR 84 (293)
T ss_dssp HHHHHHHHHHHHTCSEEEEEC---GGG--------------------CHHHHHHHHHHHHHCCSSEEEEEEESSHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeC---CCC--------------------CccHHHHHHHHHHhcCCCEEEEEecCCHHHHHH
Confidence 344455568999999988863 311 11234444444432 456777777666667777
Q ss_pred HHHh---CCCCCeeeccccCCCC-------C-------cHHHHHHHHhCCceEEEccC
Q 024751 186 ILAF---ATIPPTVNQVEMNPAW-------Q-------QRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 186 ~~~~---~~~~~~~~q~~~~~~~-------~-------~~~~i~~~~~~gi~v~a~sp 226 (263)
+++. ++.+-+-+....|..+ . -.+.+++|+++|+.+...-+
T Consensus 85 a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~ 142 (293)
T 3ewb_X 85 AEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE 142 (293)
T ss_dssp HHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred HHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 7774 3332221212222111 1 14678899999988764333
No 203
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=25.82 E-value=36 Score=30.87 Aligned_cols=23 Identities=9% Similarity=0.037 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHHcCCcEEeCCC
Q 024751 42 ESAMKSAVLESIKLGYRHFDTAS 64 (263)
Q Consensus 42 ~~~~~~~l~~A~~~Gi~~~DtA~ 64 (263)
......+++.|+++|++++|||.
T Consensus 93 ~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 93 GISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SSCHHHHHHHHHHHTCEEEESSC
T ss_pred cccCHHHHHHHHHcCCCEEECCC
Confidence 34567899999999999999994
No 204
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=25.77 E-value=2.6e+02 Score=23.64 Aligned_cols=105 Identities=12% Similarity=0.066 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEec---CCCHHH
Q 024751 106 LVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVS---NFSPKK 182 (263)
Q Consensus 106 ~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs---~~~~~~ 182 (263)
.-+..+-+.|.++|+++|.+-..-.|...... ..+.. .|+.|+.+++...++.-.+. |..++.
T Consensus 24 ~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~----------~~~~~----~~e~l~~i~~~~~~~~~~L~r~~~~~~~d 89 (320)
T 3dxi_A 24 KIVDAYILAMNELPIDYLEVGYRNKPSKEYMG----------KFGYT----PVSVLKHLRNISTKKIAIMLNEKNTTPED 89 (320)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEECCSCCSSCCC----------HHHHC----CHHHHHHHHHHCCSEEEEEEEGGGCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEecccCCcccccc----------ccccC----hHHHHHHHhhccCCeEEEEecCCCCChhh
Confidence 34455666788999999988887555221100 00011 15555555544455665553 222334
Q ss_pred HHHHHHh--CCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 183 IETILAF--ATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 183 l~~~~~~--~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
+..+... ..++...+-...+.+..-.+.+++++++|+.+...
T Consensus 90 v~~~~~a~~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 90 LNHLLLPIIGLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp HHHHHGGGTTTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHhhhcCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 5444322 33443322222221222357888899999887654
No 205
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=25.04 E-value=95 Score=23.32 Aligned_cols=81 Identities=9% Similarity=0.085 Sum_probs=54.8
Q ss_pred CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc---CCccEEEecC
Q 024751 101 DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH---GLTKSIGVSN 177 (263)
Q Consensus 101 ~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~ 177 (263)
..+.+.+.+.+++.-+.+|++ +++++-.. -.+..+.+++...+ |.|-.=|--+
T Consensus 23 ~~tl~di~~~l~~~a~~~g~~-v~~~QSN~-----------------------EgeLId~Ih~a~~~~~dgiIINpgA~T 78 (149)
T 2uyg_A 23 RTTLEELEALCEAWGAELGLG-VVFRQTNY-----------------------EGQLIEWVQQAHQEGFLAIVLNPGALT 78 (149)
T ss_dssp SCCHHHHHHHHHHHHHHTTCC-EEEEECSC-----------------------HHHHHHHHHHTTTTTCSEEEEECGGGG
T ss_pred cCCHHHHHHHHHHHHHHcCCE-EEEEeeCC-----------------------HHHHHHHHHHhccCCeeEEEEccchhc
Confidence 345688999999999999963 55555421 46788888887655 3333335556
Q ss_pred CCHHHHHHHHHhCCCCCeeeccccCCCCCc
Q 024751 178 FSPKKIETILAFATIPPTVNQVEMNPAWQQ 207 (263)
Q Consensus 178 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~ 207 (263)
|+.-.+..++....++ ++.+++|..+.+
T Consensus 79 HtSvAlrDAl~~v~~P--~VEVHiSNi~aR 106 (149)
T 2uyg_A 79 HYSYALLDAIRAQPLP--VVEVHLTNLHAR 106 (149)
T ss_dssp GTCHHHHHHHHTSCSC--EEEEESSCGGGS
T ss_pred cccHHHHHHHHhCCCC--EEEEEecCcccc
Confidence 6667777777766655 777788766554
No 206
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=24.99 E-value=1.2e+02 Score=20.80 Aligned_cols=63 Identities=11% Similarity=0.144 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
+.+.+.|...++.|++. .| ..+..+.++......++.--..++. ....+..+|++++|+++.|
T Consensus 8 ~~i~~~L~la~kagklv-~G-----~~~v~kai~~gkaklViiA~D~~~~-~~~~i~~~c~~~~ip~~~~ 70 (104)
T 4a18_G 8 DNIQSKLALVMRSGKAT-LG-----YKSTIKAIRNGTAKLVFISNNCPTV-RKSEIEYYASLAQISIHHF 70 (104)
T ss_dssp CHHHHHHHHHHHHSEEE-ES-----HHHHHHHHHHTCCCEEEECTTSCHH-HHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHhCCEe-EC-----HHHHHHHHHcCCceEEEEeCCCCHH-HHHHHHHHHHHcCCcEEEe
Confidence 45666777777888752 23 4677888888887777776665542 2356778899999999864
No 207
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=24.58 E-value=3.7e+02 Score=23.87 Aligned_cols=96 Identities=11% Similarity=0.146 Sum_probs=58.3
Q ss_pred ChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc-C-CccEEEecCC--
Q 024751 103 HRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH-G-LTKSIGVSNF-- 178 (263)
Q Consensus 103 ~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGvs~~-- 178 (263)
+++...+.+++.|+.+ +++++-.|.+. +-|+.+.+|.+. | .|.-+|=-.+
T Consensus 290 t~~eai~~~~~lle~y-----~i~~IEdPl~~---------------------dD~eg~~~L~~~~~~~ipI~gDE~~~t 343 (449)
T 3uj2_A 290 ASEELVAHWKSLCERY-----PIVSIEDGLDE---------------------EDWEGWQYMTRELGDKIQLVGDDLFVT 343 (449)
T ss_dssp EHHHHHHHHHHHHHHS-----CEEEEESCSCT---------------------TCHHHHHHHHHHHTTTSEEEESTTTTT
T ss_pred CHHHHHHHHHHHHHhc-----CceEEECCCCc---------------------chHHHHHHHHHHhCCCceEECCcceeC
Confidence 4444544445555543 68888887431 124555555554 2 4544443233
Q ss_pred CHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCce-EEEccC
Q 024751 179 SPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSII-VTAFSP 226 (263)
Q Consensus 179 ~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~-v~a~sp 226 (263)
+++.+.++++....+ ++|+..+-+- .-.+++..|+++|+. ++.+.+
T Consensus 344 n~~~~~~~i~~~a~d--~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~H~s 393 (449)
T 3uj2_A 344 NTERLNKGIKERCGN--SILIKLNQIGTVSETLEAIKMAHKAGYTAVVSHRS 393 (449)
T ss_dssp CHHHHHHHHHTTCCS--EEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CHHHHHHHHHcCCCC--EEEECccccCCHHHHHHHHHHHHHcCCeEEEeCCC
Confidence 689999999876655 6666654322 236789999999999 555544
No 208
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=24.44 E-value=3.9e+02 Score=24.00 Aligned_cols=157 Identities=11% Similarity=0.128 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCC--CCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCC
Q 024751 67 GTERALGEAIAEALKLGLVASREELFITTKLWC--SDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDI 144 (263)
Q Consensus 67 gse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~--~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~ 144 (263)
|.++.+-++|++..+.. +.+-++|.|-+.+ ...|.+.+.+.++. ..| ++++.+|.|......
T Consensus 71 G~~~kL~~~I~~~~~~~---~P~~I~V~tTC~~e~IGdDi~~v~~~~~~---~~g---~pVi~v~tpgf~g~~------- 134 (511)
T 2xdq_B 71 GSQEKVVDNIIRKDTEE---HPDLIVLTPTCTSSILQEDLQNFVRRASL---STT---ADVLLADVNHYRVNE------- 134 (511)
T ss_dssp CSSSHHHHHHHHHHHHH---CCSEEEEECCHHHHTTCCCHHHHHHHHHH---HCS---SEEEECCCCTTTCCH-------
T ss_pred chHHHHHHHHHHHHHhc---CCCEEEEeCCcHHHHhccCHHHHHHHhhh---ccC---CCEEEeeCCCcccch-------
Confidence 56656666676543322 4556788877632 23344555555543 344 688999987543210
Q ss_pred CccccccCCHHHHHHHHHH-HH--------------HcCCccEEEecCCC------HHHHHHHHHhCCCCCeeeccc---
Q 024751 145 PEEDLVSLDYNGVWEAMEE-CQ--------------RHGLTKSIGVSNFS------PKKIETILAFATIPPTVNQVE--- 200 (263)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~-l~--------------~~G~ir~iGvs~~~------~~~l~~~~~~~~~~~~~~q~~--- 200 (263)
. .-...++++|-+ +. ..+.|.-||..+.. .+++.++++..++++...-..
T Consensus 135 ----~--~G~d~a~~~lv~~~~~~~~~~~~~~~~~~~~~~VNiiG~~~~~~~~~gD~~eik~lL~~~Gi~v~~~~~gg~~ 208 (511)
T 2xdq_B 135 ----L--QAADRTLEQIVQFYIDKARRQGTLGTSKTPTPSVNIIGITTLGFHNQHDCRELKQLMADLGIQVNLVIPAAAT 208 (511)
T ss_dssp ----H--HHHHHHHHHHHHHHHHHHHHHTCCCCSCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHHHTCEEEEEEETTCC
T ss_pred ----h--HHHHHHHHHHHHHHhhccccccccccccCCCCceEEEeccCCCCCCccHHHHHHHHHHHCCCeEEEEECCcCc
Confidence 0 002223333321 11 24568888987643 577889998877664421111
Q ss_pred -----------cCCC-CC--cHHHHHHH-HhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhCC
Q 024751 201 -----------MNPA-WQ--QRKLVEFC-KSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQG 254 (263)
Q Consensus 201 -----------~~~~-~~--~~~~i~~~-~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~ 254 (263)
+|+. .+ .....++. ++.|++++...|+|-. -.+..+++||+..|.
T Consensus 209 ~~ei~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP~i~~~PiG~~---------~T~~~L~~ia~~~g~ 268 (511)
T 2xdq_B 209 VHDLQRLPQAWFNLVPYREIGGLTAQYLEREFGQPSVRITPMGVV---------ETARCIRAIQGVLNA 268 (511)
T ss_dssp TTTGGGGGGSSEEECCCTTSSHHHHHHHHHHHCCCEECCCCCSHH---------HHHHHHHHHHHHHHT
T ss_pred HHHHHhhccCCEEEEEchhhhHHHHHHHHHHhCCCeEeecccCHH---------HHHHHHHHHHHHhCC
Confidence 1111 11 13566666 6679999988888630 123456777776654
No 209
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=24.42 E-value=1.1e+02 Score=25.45 Aligned_cols=51 Identities=20% Similarity=0.183 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHH-cCCc
Q 024751 108 VPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQR-HGLT 170 (263)
Q Consensus 108 ~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~i 170 (263)
++.+.+.|+.||+..=|.+++|.--...- +.......++++|.+.+- +|-+
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG------------~v~gg~~~vi~AL~~~vg~~GTL 66 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIG------------WVNGGAVAVIQALIDVVTEEGTI 66 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGC------------CBTTHHHHHHHHHHHHHTTTSEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhC------------CCCCCHHHHHHHHHHHhCCCCeE
Confidence 55678888999999999999996422100 011226788999988774 6644
No 210
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=24.38 E-value=2.1e+02 Score=23.41 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHcCCcEEeCCCCcC--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCC------CCCCChhHHHHHHHHHH
Q 024751 44 AMKSAVLESIKLGYRHFDTASLYG--TERALGEAIAEALKLGLVASREELFITTKLW------CSDAHRDLVVPALKKSL 115 (263)
Q Consensus 44 ~~~~~l~~A~~~Gi~~~DtA~~Yg--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~------~~~~~~~~i~~~~~~sL 115 (263)
...+.++.|-+.|+.+++.++..- +++..-++++.....| +.+.+-++ ....+++...+.+++-|
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G-------~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~L 158 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNG-------FMVLTEVGKKMPDKDKQLTIDDRIKLINFDL 158 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTT-------CEEEEEECCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCC-------CEEeeeccccCCcccCCCCHHHHHHHHHHHH
Confidence 456677788888888888887765 6777777787763333 44444443 23457788888888888
Q ss_pred HHhCCCcccEEEeecC
Q 024751 116 KTLQIEYVDLYLIHWP 131 (263)
Q Consensus 116 ~~Lg~~~iDl~~lh~p 131 (263)
+. | .|.+++..-
T Consensus 159 eA-G---A~~ViiEar 170 (251)
T 1qwg_A 159 DA-G---ADYVIIEGR 170 (251)
T ss_dssp HH-T---CSEEEECCT
T ss_pred HC-C---CcEEEEeee
Confidence 76 5 577888754
No 211
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=24.20 E-value=3.2e+02 Score=22.99 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHc-CCccEEEecCCCHHHHHHH
Q 024751 108 VPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRH-GLTKSIGVSNFSPKKIETI 186 (263)
Q Consensus 108 ~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~ 186 (263)
+-.+-+.|.++|+++|.+-+ |.. ...-|+.++++.+. ..++..+++--+...++.+
T Consensus 30 Kl~ia~~L~~~Gv~~IE~g~---p~~--------------------~~~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a 86 (325)
T 3eeg_A 30 KIIVAKALDELGVDVIEAGF---PVS--------------------SPGDFNSVVEITKAVTRPTICALTRAKEADINIA 86 (325)
T ss_dssp HHHHHHHHHHHTCSEEEEEC---TTS--------------------CHHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeC---CCC--------------------CHhHHHHHHHHHHhCCCCEEEEeecCCHHHHHHH
Confidence 34455568889999988852 311 12234555555553 3466667765567777776
Q ss_pred HHh---CCCCCeeeccccCCC---------C-----CcHHHHHHHHhCCceEEEccCCC
Q 024751 187 LAF---ATIPPTVNQVEMNPA---------W-----QQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 187 ~~~---~~~~~~~~q~~~~~~---------~-----~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
++. .+++-+-+....|.. . .-.+.+++|+++|+.+.-.-|.+
T Consensus 87 ~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~ 145 (325)
T 3eeg_A 87 GEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDA 145 (325)
T ss_dssp HHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETG
T ss_pred HHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 665 122211111111111 0 11578999999999886555544
No 212
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=24.16 E-value=3.6e+02 Score=23.56 Aligned_cols=151 Identities=13% Similarity=0.124 Sum_probs=88.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEeC--C-----CCcC----------------------------CHHHHHHHHHHHHhcCC
Q 024751 40 IDESAMKSAVLESIKLGYRHFDT--A-----SLYG----------------------------TERALGEAIAEALKLGL 84 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~Dt--A-----~~Yg----------------------------se~~lG~al~~~~~~~~ 84 (263)
.++++..+..+.+++.|++.|=. . ..|| ....+=+++|+.+
T Consensus 149 ~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~---- 224 (425)
T 3vcn_A 149 ETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVL---- 224 (425)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHc----
Confidence 46788888899999999986631 1 0121 1123335566542
Q ss_pred CCCCccEEEeeCCCCCCCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHH
Q 024751 85 VASREELFITTKLWCSDAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEEC 164 (263)
Q Consensus 85 ~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 164 (263)
.+++-|..... ...+.+...+ +-+.|+.+++ .++..|.+.. .++.+.++
T Consensus 225 ---G~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~i-----~~iEqP~~~~---------------------d~~~~~~l 273 (425)
T 3vcn_A 225 ---GWDVHLLHDVH-HRLTPIEAAR-LGKDLEPYRL-----FWLEDSVPAE---------------------NQAGFRLI 273 (425)
T ss_dssp ---CSSSEEEEECT-TCCCHHHHHH-HHHHHGGGCC-----SEEECCSCCS---------------------STTHHHHH
T ss_pred ---CCCCEEEEECC-CCCCHHHHHH-HHHHHHhcCC-----CEEECCCChh---------------------hHHHHHHH
Confidence 23344544543 2344444333 2234565554 4455553210 12356667
Q ss_pred HHcCCccE-EEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 165 QRHGLTKS-IGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 165 ~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
++.-.|-- .|=+-++.+.+.++++...++ ++|+...-+- .-..+...|+++|+.++..+..
T Consensus 274 ~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 274 RQHTTTPLAVGEIFAHVWDAKQLIEEQLID--YLRATVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp HHHCCSCEEECTTCCSGGGTHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred HhcCCCCEEeCCCcCCHHHHHHHHHcCCCC--eEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 66544442 333556788899999876655 7777765432 2257999999999999888775
No 213
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=24.11 E-value=3.4e+02 Score=23.21 Aligned_cols=36 Identities=14% Similarity=0.189 Sum_probs=27.0
Q ss_pred HHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCC
Q 024751 159 EAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 159 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
+.+.++++.=.+--|+...++.+..+++++....+.
T Consensus 284 ~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~ 319 (364)
T 1vyr_A 284 AFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDA 319 (364)
T ss_dssp HHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccE
Confidence 345566666567778888889999999999876663
No 214
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=24.07 E-value=1.8e+02 Score=20.78 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHhCCCCCeeeccccCCCC-CcHHHHHHHHhCCceEEEccCC
Q 024751 178 FSPKKIETILAFATIPPTVNQVEMNPAW-QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 178 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~-~~~~~i~~~~~~gi~v~a~spl 227 (263)
.+.+.+..+++. .++..++=..-.... ...++.++++++||++..+..-
T Consensus 49 l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~ 98 (122)
T 2ab1_A 49 VQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTE 98 (122)
T ss_dssp CCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECHH
T ss_pred CCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCHH
Confidence 456777777663 345444444444433 4578999999999999887643
No 215
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=23.94 E-value=2.6e+02 Score=23.03 Aligned_cols=71 Identities=20% Similarity=0.079 Sum_probs=48.4
Q ss_pred HHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCC-ceEEEccCCCC
Q 024751 158 WEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKS-IIVTAFSPLGA 229 (263)
Q Consensus 158 ~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~g-i~v~a~spl~~ 229 (263)
.+.++.+...| +..+-..-.+.+.+.++++..+++.+++-...........+++.|++.| +..+.+|.++.
T Consensus 51 ~~~~~~l~~~~-v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~ 122 (346)
T 3i6i_A 51 AKIFKALEDKG-AIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGH 122 (346)
T ss_dssp HHHHHHHHHTT-CEEEECCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSS
T ss_pred HHHHHHHHhCC-cEEEEeecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecccCC
Confidence 34455665554 5566555557888999998666666665544433344578999999999 88888887753
No 216
>2fg1_A Conserved hypothetical protein BT1257; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.25A {Bacteroides thetaiotaomicron} SCOP: c.50.1.2 PDB: 2afc_A
Probab=23.90 E-value=47 Score=24.92 Aligned_cols=32 Identities=25% Similarity=0.193 Sum_probs=23.4
Q ss_pred cccCeeceeccccCCChHHHHHHHHHHH-HcCCcE
Q 024751 26 RKMPVIGLGSAVDNIDESAMKSAVLESI-KLGYRH 59 (263)
Q Consensus 26 ~~v~~iglG~~~~~~~~~~~~~~l~~A~-~~Gi~~ 59 (263)
+.+|+||.|... .+.+++.+++...+ +.++..
T Consensus 121 Ia~P~Ig~G~~G--~~w~~v~~ii~~~l~~~~i~v 153 (158)
T 2fg1_A 121 VHMPRIGCGLAG--GKWELMEQIIKEELITKEIAV 153 (158)
T ss_dssp EEECCTTCSTTC--CCHHHHHHHHHHHTGGGTCCE
T ss_pred EEecCcCCCCCC--CCHHHHHHHHHHHhccCCcEE
Confidence 778888888877 46778888888776 445543
No 217
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=23.80 E-value=3.2e+02 Score=22.81 Aligned_cols=147 Identities=12% Similarity=0.059 Sum_probs=76.5
Q ss_pred ChHHHHHHHHHHHHcCCcEEe-CCCCcCC---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHH
Q 024751 41 DESAMKSAVLESIKLGYRHFD-TASLYGT---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLK 116 (263)
Q Consensus 41 ~~~~~~~~l~~A~~~Gi~~~D-tA~~Ygs---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~ 116 (263)
.+.+..+.+..+++.+.+..- ....+|. .+.+-+.+.+.. | -+++++++= -.+++...++
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~--g----~~~v~~~~g----------gt~a~~~~~~ 121 (398)
T 3a2b_A 58 TDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYV--G----KEAAILFST----------GFQSNLGPLS 121 (398)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH--T----CSEEEEESS----------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHh--C----CCcEEEECC----------HHHHHHHHHH
Confidence 456677777777765432111 0112332 234455555432 2 245555431 1234444555
Q ss_pred HhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhC---CCC
Q 024751 117 TLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFA---TIP 193 (263)
Q Consensus 117 ~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~---~~~ 193 (263)
.+ ++.=|.+++..|.+ ......+ ...| .+-+.+...+.+.++++++.. +++
T Consensus 122 ~~-~~~gd~V~~~~p~~---------------------~~~~~~~---~~~g-~~~~~v~~~d~~~l~~~l~~~~~~~~~ 175 (398)
T 3a2b_A 122 CL-MGRNDYILLDERDH---------------------ASIIDGS---RLSF-SKVIKYGHNNMEDLRAKLSRLPEDSAK 175 (398)
T ss_dssp HS-SCTTCEEEEETTCC---------------------HHHHHHH---HHSS-SEEEEECTTCHHHHHHHHHTSCSSSCE
T ss_pred HH-hCCCCEEEECCccC---------------------HHHHHHH---HHcC-CceEEeCCCCHHHHHHHHHhhccCCce
Confidence 54 23447888887743 1222222 2233 234445446778888887753 334
Q ss_pred CeeeccccCCC---CCcHHHHHHHHhCCceEEEccCCCC
Q 024751 194 PTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 194 ~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
.++.....|+. ..-.++.++|+++|+.++.-...+.
T Consensus 176 ~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~ 214 (398)
T 3a2b_A 176 LICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSL 214 (398)
T ss_dssp EEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred EEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcc
Confidence 33433333432 1236788999999998888776653
No 218
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=23.75 E-value=3.8e+02 Score=23.68 Aligned_cols=148 Identities=11% Similarity=0.061 Sum_probs=87.2
Q ss_pred CChHHHHHHHHHHHHc-CCcEEeCCCCcCC-H--HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKL-GYRHFDTASLYGT-E--RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSL 115 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Ygs-e--~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL 115 (263)
.++++..+..+.+++. |++.|=.=..... + ...=+++|+. - +++-|..-.. ...+++.. .+.+
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea-------~-~~~~L~vDaN-~~w~~~~A----i~~~ 256 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKA-------F-PGVPLRLDPN-AAWTVETS----KWVA 256 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHH-------S-TTCCEEEECT-TCBCHHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHh-------C-CCCcEeeeCC-CCCCHHHH----HHHH
Confidence 4677888888888875 9997743211111 2 2223455654 2 2333333322 22333332 2334
Q ss_pred HHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCC
Q 024751 116 KTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 116 ~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
+.|. ++ +.++..|. . .++.+.++++.-.|- +.|=+-++...+.++++...++
T Consensus 257 ~~L~-~~--l~~iEeP~----------------------~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d- 309 (445)
T 3va8_A 257 KELE-GI--VEYLEDPA----------------------G-EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQ- 309 (445)
T ss_dssp HHTT-TT--CSEEESCB----------------------S-HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCS-
T ss_pred HHHh-hh--cCeEeecC----------------------c-CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCC-
Confidence 5554 23 66777661 1 256777777654433 4455677888899999876665
Q ss_pred eeeccccCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 195 TVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 195 ~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
++|....-+ ..-..+...|+++|+.+...+...
T Consensus 310 -iv~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~e 345 (445)
T 3va8_A 310 -VILSDHHFWGGLRKSQTLASICATWGLRLSMHSNSH 345 (445)
T ss_dssp -EEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCCSC
T ss_pred -EEEecchhcCCHHHHHHHHHHHHHcCCEEEEeCCcc
Confidence 677654332 223679999999999999987664
No 219
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=23.74 E-value=3.4e+02 Score=23.08 Aligned_cols=151 Identities=11% Similarity=0.064 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHH-cCCcEEeCCCCcC---CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHHHH
Q 024751 42 ESAMKSAVLESIK-LGYRHFDTASLYG---TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 42 ~~~~~~~l~~A~~-~Gi~~~DtA~~Yg---se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL~~ 117 (263)
.++..+....+++ .|++.|-.=-... .+...=+++|+. -.+++-|..... ..++.+...+ +-+.|+.
T Consensus 143 ~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~-------~g~~~~l~vDan-~~~~~~~a~~-~~~~l~~ 213 (370)
T 1chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNS-------LGSKAYLRVDVN-QAWDEQVASV-YIPELEA 213 (370)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHH-------SSTTCCEEEECT-TCCCTTHHHH-HTHHHHT
T ss_pred cHHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHh-------cCCCCEEEEECC-CCCCHHHHHH-HHHHHHh
Confidence 3443444455555 8999875422111 223334566654 233344444542 2233333322 2233444
Q ss_pred hCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCee
Q 024751 118 LQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTV 196 (263)
Q Consensus 118 Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~ 196 (263)
+ ++.++..|... ..++.+.++++.-.|. ..|=+-++..++.++++...++ +
T Consensus 214 ~-----~i~~iEqP~~~---------------------~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d--~ 265 (370)
T 1chr_A 214 L-----GVELIEQPVGR---------------------ENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVD--V 265 (370)
T ss_dssp T-----TEEEEECCSCT---------------------TCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCS--E
T ss_pred c-----CCCEEECCCCc---------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCC--E
Confidence 4 45666666321 1245677777654443 3344567889999998876555 7
Q ss_pred eccccCCCC---CcHHHHHHHHhCCceEEEccCCCC
Q 024751 197 NQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 197 ~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
+|+..+-+- .-..+...|+++|+.++..+.+.+
T Consensus 266 v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (370)
T 1chr_A 266 FSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDS 301 (370)
T ss_dssp EEECTTTSCSHHHHHHHHHHHHHHTCEEEECCSCCT
T ss_pred EEECccccCCHHHHHHHHHHHHHcCCeEEecCCCcc
Confidence 777765442 235799999999999998776654
No 220
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=23.48 E-value=2.9e+02 Score=22.30 Aligned_cols=75 Identities=9% Similarity=0.088 Sum_probs=48.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCC--CCCChhHHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWC--SDAHRDLVVPALKKSLKT 117 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~--~~~~~~~i~~~~~~sL~~ 117 (263)
.+.++..++++.|.+.|+.-+-..+.| +..+-+.+ ...++-|++=+.. ...+.+.-....++.++.
T Consensus 40 ~t~~~i~~lc~eA~~~~~~aVcV~p~~-----v~~a~~~L-------~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~ 107 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAEYKFASVCVNPTW-----VPLCAELL-------KGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQ 107 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGGG-----HHHHHHHH-------TTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHHH-----HHHHHHHh-------CCCCCeEEEEeccCCCCCchHHHHHHHHHHHHc
Confidence 467889999999999999988877766 33332322 2334555555533 233444445567777775
Q ss_pred hCCCcccEEE
Q 024751 118 LQIEYVDLYL 127 (263)
Q Consensus 118 Lg~~~iDl~~ 127 (263)
|.|-||+++
T Consensus 108 -GAdEIDmVi 116 (239)
T 3ngj_A 108 -GAEEVDMVI 116 (239)
T ss_dssp -TCSEEEEEC
T ss_pred -CCCEEEEEe
Confidence 999999874
No 221
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=23.46 E-value=3.5e+02 Score=23.22 Aligned_cols=21 Identities=10% Similarity=0.268 Sum_probs=17.4
Q ss_pred HHHHHHHHhCCceEEEccCCC
Q 024751 208 RKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 208 ~~~i~~~~~~gi~v~a~spl~ 228 (263)
.++.+.|+++|+.++.-.+.+
T Consensus 224 ~~i~~l~~~~~~~li~De~~~ 244 (447)
T 3b46_A 224 TTLGNICVKHNVVIISDEVYE 244 (447)
T ss_dssp HHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHHHcCcEEEEeccch
Confidence 568999999999999866665
No 222
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=23.32 E-value=2.8e+02 Score=22.06 Aligned_cols=103 Identities=9% Similarity=0.091 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHcCCcEE---eCCCCcC-CH---HHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHH
Q 024751 42 ESAMKSAVLESIKLGYRHF---DTASLYG-TE---RALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKS 114 (263)
Q Consensus 42 ~~~~~~~l~~A~~~Gi~~~---DtA~~Yg-se---~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~s 114 (263)
...+..++++.++.|.+.| -....+. .. ..+-+++++. |+ +-+ .+ ....+.+...+.+++.
T Consensus 116 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~---g~--~~~--~~-----~~~~~~~~~~~~~~~~ 183 (295)
T 3hcw_A 116 ILASENLTRHVIEQGVDELIFITEKGNFEVSKDRIQGFETVASQF---NL--DYQ--II-----ETSNEREVILNYMQNL 183 (295)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEESSCCHHHHHHHHHHHHHHHHT---TC--EEE--EE-----EECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccEEEEcCCccchhHHHHHHHHHHHHHHc---CC--Cee--EE-----eccCCHHHHHHHHHHH
Confidence 3456777778888887743 2222221 22 2222333332 42 111 11 1234567777888888
Q ss_pred HHHhC-CCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCc--cEEEecCCC
Q 024751 115 LKTLQ-IEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLT--KSIGVSNFS 179 (263)
Q Consensus 115 L~~Lg-~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i--r~iGvs~~~ 179 (263)
|+... -+.+|.++..+ ..-+..+++.|++.|+- +-|.|..|+
T Consensus 184 l~~~~~~~~~~ai~~~~-----------------------d~~A~g~~~al~~~g~~vP~di~vig~D 228 (295)
T 3hcw_A 184 HTRLKDPNIKQAIISLD-----------------------AMLHLAILSVLYELNIEIPKDVMTATFN 228 (295)
T ss_dssp HHHHTCTTSCEEEEESS-----------------------HHHHHHHHHHHHHTTCCTTTTEEEEEEC
T ss_pred HhhcccCCCCcEEEECC-----------------------hHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 87763 23578877753 24567778888888863 344444443
No 223
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=23.31 E-value=87 Score=23.37 Aligned_cols=42 Identities=12% Similarity=0.147 Sum_probs=21.6
Q ss_pred HHHHHHHhCCCc--ccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcC
Q 024751 111 LKKSLKTLQIEY--VDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHG 168 (263)
Q Consensus 111 ~~~sL~~Lg~~~--iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G 168 (263)
+.+.|+.+.... +|.+++...+...+. ..+....++.|.+.|
T Consensus 62 l~~ll~~~~~g~~~~d~lvv~~ldRl~R~----------------~~~~~~~~~~l~~~g 105 (167)
T 3guv_A 62 FNRMMEDIKSGKDGVSFVLVFKLSRFARN----------------AADVLSTLQIMQDYG 105 (167)
T ss_dssp HHHHHHHHHTCTTCCSEEEESCGGGTCSS----------------HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCccEEEEEeCchhcCC----------------HHHHHHHHHHHHHCC
Confidence 344444443333 666666665443332 555556666666555
No 224
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.31 E-value=3e+02 Score=22.38 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=34.6
Q ss_pred eeceeccccCCC-hH-HHHHHHHHHHHcCCcEEeCCC-----CcC-CHHHHHHHHHHH
Q 024751 30 VIGLGSAVDNID-ES-AMKSAVLESIKLGYRHFDTAS-----LYG-TERALGEAIAEA 79 (263)
Q Consensus 30 ~iglG~~~~~~~-~~-~~~~~l~~A~~~Gi~~~DtA~-----~Yg-se~~lG~al~~~ 79 (263)
+||+-+|++... .+ ...+.++.+-+.|+..++... .|+ .-+.+.+.+++.
T Consensus 14 ~~g~~~~s~~~~~~~~~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~ 71 (303)
T 3l23_A 14 EIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDA 71 (303)
T ss_dssp CCEEEGGGGGGGGGSSCHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHT
T ss_pred ceEEEEEEchhhhccCCHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHc
Confidence 578888876410 11 466789999999999999875 344 456666777765
No 225
>3szt_A QCSR, quorum-sensing control repressor; quorum sensing acyl-homoserine lactone, helix-turn-helix, transcription factor, 3-OXO-C12 HSL; HET: OHN; 2.55A {Pseudomonas aeruginosa}
Probab=23.30 E-value=2.7e+02 Score=21.87 Aligned_cols=92 Identities=13% Similarity=0.035 Sum_probs=54.0
Q ss_pred CChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHH
Q 024751 102 AHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSIGVSNFSPK 181 (263)
Q Consensus 102 ~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~ 181 (263)
.+.+.+.+.+++..+.+|.+++-..+.+.. +.. .-..+-++|++.+
T Consensus 16 ~~~~~l~~~l~~~~~~lGf~~~~y~~~~~~-~~~---------------------------------~~~~~i~~~~p~~ 61 (237)
T 3szt_A 16 TTEEEFFSLVLEICGNYGFEFFSFGARAPF-PLT---------------------------------APKYHFLSNYPGE 61 (237)
T ss_dssp CSHHHHHHHHHHHHHHTTCSEEEEEEECCC-STT---------------------------------SCCEEEEECCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEeecCC-CCC---------------------------------CCCeEeeCCCCHH
Confidence 356889999999999999988777665522 100 0123446677766
Q ss_pred HHHHHHHh--CCCCCeeeccccC--C-------CCCcHHHHHHHHhCCceEEEccCC
Q 024751 182 KIETILAF--ATIPPTVNQVEMN--P-------AWQQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 182 ~l~~~~~~--~~~~~~~~q~~~~--~-------~~~~~~~i~~~~~~gi~v~a~spl 227 (263)
.++...+. ..++|++....-+ | ......+++.++++|+.--..-|+
T Consensus 62 w~~~Y~~~~y~~~DPv~~~~~~~~~p~~W~~~~~~~~~~~~~~a~~~gl~~G~~~p~ 118 (237)
T 3szt_A 62 WKSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQENRFFWEEALHHGIRHGWSIPV 118 (237)
T ss_dssp HHHHHHHTTGGGTCHHHHHHHHSCSCEEEETTTCSSCHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHCCCcccChHhhhhcCCCCCEEeCCCCcccHHHHHHHHHHcCCCCEEEEEe
Confidence 66665553 2345544222111 1 122367999999998753333344
No 226
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=23.28 E-value=3e+02 Score=22.48 Aligned_cols=87 Identities=9% Similarity=0.028 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHHHHc-CCccEEEecCCCH------HHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEE-E
Q 024751 152 LDYNGVWEAMEECQRH-GLTKSIGVSNFSP------KKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVT-A 223 (263)
Q Consensus 152 ~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~------~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~-a 223 (263)
......++.+++++++ -.+--+..+-+++ +.+.+.+..++++-.++ .--+.....++++.|+++|+.++ .
T Consensus 77 ~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii--~Dlp~ee~~~~~~~~~~~gl~~i~l 154 (267)
T 3vnd_A 77 TTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLI--ADVPVEESAPFSKAAKAHGIAPIFI 154 (267)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEE--TTSCGGGCHHHHHHHHHTTCEEECE
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEe--CCCCHhhHHHHHHHHHHcCCeEEEE
Confidence 4455678888888877 3555455544454 44444444455664333 22233445689999999998755 4
Q ss_pred ccCCCCCCCCCCCCCCCCcHHHHHHHHHh
Q 024751 224 FSPLGAVGSSWGTNQVMNNEALKQIAALQ 252 (263)
Q Consensus 224 ~spl~~~G~l~~~~~~l~~~~l~~ia~~~ 252 (263)
.+|-. ...+++.+++.-
T Consensus 155 iaP~t------------~~eri~~i~~~~ 171 (267)
T 3vnd_A 155 APPNA------------DADTLKMVSEQG 171 (267)
T ss_dssp ECTTC------------CHHHHHHHHHHC
T ss_pred ECCCC------------CHHHHHHHHHhC
Confidence 44443 235677777653
No 227
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=22.83 E-value=59 Score=24.14 Aligned_cols=26 Identities=23% Similarity=0.314 Sum_probs=13.5
Q ss_pred cccCeeceeccccCCChHHHHHHHHHHH
Q 024751 26 RKMPVIGLGSAVDNIDESAMKSAVLESI 53 (263)
Q Consensus 26 ~~v~~iglG~~~~~~~~~~~~~~l~~A~ 53 (263)
+.+|+||.|... .+.+++.+++..++
T Consensus 112 Ia~P~IgtG~~G--~~~~~v~~ii~~~~ 137 (149)
T 2eee_A 112 LSMPRIGCGLDR--LQWENVSAMIEEVF 137 (149)
T ss_dssp EECCCCCCTTTT--CCHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCC--CCHHHHHHHHHHHh
Confidence 455555555544 34555555555554
No 228
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=22.79 E-value=1.5e+02 Score=27.01 Aligned_cols=166 Identities=11% Similarity=0.110 Sum_probs=85.3
Q ss_pred CcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC--CCChhHHHHHHHHHHHHhCCC-cccEEEeecCCCCCCCcccc
Q 024751 65 LYGTERALGEAIAEALKLGLVASREELFITTKLWCS--DAHRDLVVPALKKSLKTLQIE-YVDLYLIHWPMSAKPSEKLR 141 (263)
Q Consensus 65 ~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~--~~~~~~i~~~~~~sL~~Lg~~-~iDl~~lh~p~~~~~~~~~~ 141 (263)
.||.++.+-++|++..+.- ..+-++|.|-.... ..|.+.+ +++.-++-++. .+.++.+|.|......
T Consensus 122 VfGg~~kL~~aI~~~~~~~---~P~~I~V~tTC~~eiIGdDi~~v---~~~~~~~~~~p~g~pVi~v~tpgf~gs~---- 191 (519)
T 1qgu_B 122 VFGGNNNMNLGLQNASALY---KPEIIAVSTTCMAEVIGDDLQAF---IANAKKDGFVDSSIAVPHAHTPSFIGSH---- 191 (519)
T ss_dssp HHCSHHHHHHHHHHHHHHH---CCSEEEEEECHHHHHHTCCHHHH---HHHHHHTTSSCTTSBCCBCCCCTTSSCH----
T ss_pred ccCCHHHHHHHHHHHHHhh---CCCEEEEeCCCcHHHhCCCHHHH---HHHHHHhcCCCCCCcEEEeeCCCcCCCh----
Confidence 3677777788887664432 45557888766321 2222333 33333331121 3788888877543210
Q ss_pred CCCCccccccCCHHHHHHHHHH-HHH--------cCCccEEEecCC---CHHHHHHHHHhCCCCCeeecc----------
Q 024751 142 NDIPEEDLVSLDYNGVWEAMEE-CQR--------HGLTKSIGVSNF---SPKKIETILAFATIPPTVNQV---------- 199 (263)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~-l~~--------~G~ir~iGvs~~---~~~~l~~~~~~~~~~~~~~q~---------- 199 (263)
..-...++++|-+ +.+ .++|.-||-.+. +.+++.++++..++++.+..-
T Consensus 192 ---------~~G~~~a~~al~~~l~~~~~~~~~~~~~VNIlg~~~~~~gD~~eik~lL~~~Gi~v~~lpd~s~~ld~~~~ 262 (519)
T 1qgu_B 192 ---------VTGWDNMFEGFAKTFTADYQGQPGKLPKLNLVTGFETYLGNFRVLKRMMEQMAVPCSLLSDPSEVLDTPAD 262 (519)
T ss_dssp ---------HHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCSCCCHHHHHHHHHHHHHHTCCEEESSCTTTTTSCCCS
T ss_pred ---------hHHHHHHHHHHHHHhhccccccCCCCCcEEEECCCCCCcccHHHHHHHHHHcCCeEEEecCccccccCccc
Confidence 0113344444443 322 123555664432 236788888888877543110
Q ss_pred -ccCCCC---------------------C--cHHHHHHHHhC-CceEEEc-cCCCCCCCCCCCCCCCCcHHHHHHHHHhC
Q 024751 200 -EMNPAW---------------------Q--QRKLVEFCKSK-SIIVTAF-SPLGAVGSSWGTNQVMNNEALKQIAALQQ 253 (263)
Q Consensus 200 -~~~~~~---------------------~--~~~~i~~~~~~-gi~v~a~-spl~~~G~l~~~~~~l~~~~l~~ia~~~~ 253 (263)
+|+.+. + .....++.+++ |++++.. .|+|- --.+..+++||+..|
T Consensus 263 ~~~~~~~gg~~~~ei~~~~~A~~niv~~~~~~~~~A~~Le~r~GiP~i~~~~PiG~---------~~T~~~L~~la~~~g 333 (519)
T 1qgu_B 263 GHYRMYSGGTTQQEMKEAPDAIDTLLLQPWQLLKSKKVVQEMWNQPATEVAIPLGL---------AATDELLMTVSQLSG 333 (519)
T ss_dssp SCCCSCCCCBCHHHHHHGGGEEEEEESSTTTCHHHHHHHHHTSCCCCCCCCCCBSH---------HHHHHHHHHHHHHHC
T ss_pred CcccccCCCCCHHHHHhhhcCCEEEEECHHHHHHHHHHHHHHcCCCeEecCCCcch---------HHHHHHHHHHHHHHC
Confidence 011110 1 13455566554 8887765 35642 012456888888888
Q ss_pred CCchh
Q 024751 254 GETER 258 (263)
Q Consensus 254 ~t~~~ 258 (263)
...++
T Consensus 334 ~~~~~ 338 (519)
T 1qgu_B 334 KPIAD 338 (519)
T ss_dssp CCCCH
T ss_pred CCcHH
Confidence 76443
No 229
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=22.77 E-value=95 Score=21.49 Aligned_cols=63 Identities=10% Similarity=0.047 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
+.+.+.|...++.|++ -. ...+..+.++......++.--+.++ .....+..+|++++|+++.|
T Consensus 8 ~~i~~~L~la~kagk~-v~-----G~~~v~kai~~gkaklVilA~D~~~-~~~~~i~~~c~~~~ip~~~~ 70 (105)
T 3u5e_c 8 ESINQKLALVIKSGKY-TL-----GYKSTVKSLRQGKSKLIIIAANTPV-LRKSELEYYAMLSKTKVYYF 70 (105)
T ss_dssp -CHHHHHHHHHTTSEE-EE-----SHHHHHHHHHTTCCSEEEECTTSCH-HHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHhCCe-eE-----CHHHHHHHHHcCCceEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEe
Confidence 4466677777788875 22 3567778888888777776655543 12356888999999999865
No 230
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=22.68 E-value=3.5e+02 Score=22.89 Aligned_cols=73 Identities=10% Similarity=0.039 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCCCC
Q 024751 156 GVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPLGA 229 (263)
Q Consensus 156 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl~~ 229 (263)
..+..+..+.+.--++..-+...+.+.++++++. +.+.+++....|+.- .-.++.+.|+++|+.++.-...+.
T Consensus 117 ~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~ 192 (392)
T 3qhx_A 117 GTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFAS 192 (392)
T ss_dssp HHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTC
T ss_pred hHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcc
Confidence 3444554433322233444444467777777642 333334333344432 226899999999999998877764
No 231
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=22.66 E-value=3.6e+02 Score=23.03 Aligned_cols=35 Identities=9% Similarity=-0.043 Sum_probs=25.9
Q ss_pred HHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCC
Q 024751 159 EAMEECQRHGLTKSIGVSNFSPKKIETILAFATIP 193 (263)
Q Consensus 159 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 193 (263)
+.+.++++.=.+--|++..++++..+++++....+
T Consensus 283 ~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD 317 (365)
T 2gou_A 283 SFKRALREAYQGVLIYAGRYNAEKAEQAINDGLAD 317 (365)
T ss_dssp HHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcc
Confidence 34455555556677888888999999999987655
No 232
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=22.48 E-value=3.3e+02 Score=22.55 Aligned_cols=84 Identities=8% Similarity=-0.038 Sum_probs=53.7
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHhCCC----------------CCeeeccccCCCCCcHHHHHHHHhCCceEEEc
Q 024751 161 MEECQRHGLTKSIGVSNFSPKKIETILAFATI----------------PPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAF 224 (263)
Q Consensus 161 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~----------------~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~ 224 (263)
+..+.+...++-++|++-+.+..+++.+..++ +.+++ .+|-....+++..|-++|+.|++=
T Consensus 40 ~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I---~tP~~~H~~~~~~al~aGkhVl~E 116 (350)
T 4had_A 40 VPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYI---PLPTSQHIEWSIKAADAGKHVVCE 116 (350)
T ss_dssp HHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEE---CSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEE---eCCCchhHHHHHHHHhcCCEEEEe
Confidence 44556666788889998888877776654432 22111 112122257888888999999999
Q ss_pred cCCCCCCCCCCCCCCCCcHHHHHHHHHhCCC
Q 024751 225 SPLGAVGSSWGTNQVMNNEALKQIAALQQGE 255 (263)
Q Consensus 225 spl~~~G~l~~~~~~l~~~~l~~ia~~~~~t 255 (263)
.|++. .+-+-..+.+.|++.++.
T Consensus 117 KPla~--------~~~ea~~l~~~a~~~~~~ 139 (350)
T 4had_A 117 KPLAL--------KAGDIDAVIAARDRNKVV 139 (350)
T ss_dssp SCCCS--------SGGGGHHHHHHHHHHTCC
T ss_pred CCccc--------chhhHHHHHHHHHHcCCc
Confidence 99985 222345566777776653
No 233
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=22.40 E-value=1.7e+02 Score=26.62 Aligned_cols=156 Identities=13% Similarity=0.123 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC--CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCC
Q 024751 68 TERALGEAIAEALKLGLVASREELFITTKLWCS--DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIP 145 (263)
Q Consensus 68 se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~--~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~ 145 (263)
.++.+-++|++..+.. +.+-|+|.|-+... ..|.+.+.+. +.. .+.++.+|.|......
T Consensus 69 ~e~kL~~aI~~~~~~~---~P~~I~V~tTC~~elIGdDi~~v~~~-------~~~-~~pVi~v~tpgf~g~~-------- 129 (525)
T 3aek_B 69 TAILLKDALAAAHARY---KPQAMAVALTCTAELLQDDPNGISRA-------LNL-PVPVVPLELPSYSRKE-------- 129 (525)
T ss_dssp HHHHHHHHHHHHHHHH---CCSEEEEEECTTGGGSCCCHHHHHHH-------HTC-SSCEEECCCCTTTCCH--------
T ss_pred cHHHHHHHHHHHHHhc---CCCEEEEECCcHHHHhcccHHHHHHH-------hcC-CCCEEEEECCCcCCch--------
Confidence 5667777776654332 34568888876432 2233333333 333 4679999988543210
Q ss_pred ccccccCCHHHHHHHHHHH-H------HcCCccEEEecCC------CHHHHHHHHHhCCCCCeeeccc------------
Q 024751 146 EEDLVSLDYNGVWEAMEEC-Q------RHGLTKSIGVSNF------SPKKIETILAFATIPPTVNQVE------------ 200 (263)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~l-~------~~G~ir~iGvs~~------~~~~l~~~~~~~~~~~~~~q~~------------ 200 (263)
. .-...++.+|-+. . +.+.|.-||..+. +.+.+.++++..++++...--.
T Consensus 130 ---~--~G~~~al~alv~~~~~~~~~~~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~~pgg~t~~ei~~~~~ 204 (525)
T 3aek_B 130 ---N--YGADETFRALVRALAVPMERTPEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAPLGASPDDLRKLGQ 204 (525)
T ss_dssp ---H--HHHHHHHHHHHHHHCCCCCCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEEEETTCCHHHHHTGGG
T ss_pred ---h--HHHHHHHHHHHHHhccCccCCCCCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhcc
Confidence 0 0022233333322 1 1256888898773 3567899999887765442111
Q ss_pred --cCCCCCc---HHHHHHH-HhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhCCCc
Q 024751 201 --MNPAWQQ---RKLVEFC-KSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQGET 256 (263)
Q Consensus 201 --~~~~~~~---~~~i~~~-~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~t~ 256 (263)
+|+.... ....++. ++.|++++...|+|-. -.+..+++||+..|..+
T Consensus 205 A~~niv~~~~~g~~~A~~Le~r~GiP~i~~~PiG~~---------~T~~~Lr~ia~~~g~~~ 257 (525)
T 3aek_B 205 AHFNVLMYPETGESAARHLERACKQPFTKIVPIGVG---------ATRDFLAEVSKITGLPV 257 (525)
T ss_dssp SSEEEECCHHHHHHHHHHHHHHSCCCBCCCCCCSHH---------HHHHHHHHHHHHHCCCC
T ss_pred CCEEEEEChhhHHHHHHHHHHHcCCCceecCCcCHH---------HHHHHHHHHHHHHCCCH
Confidence 1111111 2345555 4569999988888630 12456788888777654
No 234
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=22.24 E-value=1.9e+02 Score=25.43 Aligned_cols=65 Identities=15% Similarity=0.192 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCC--cc-EEEecCCCHHHHHHHHHhCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEEcc
Q 024751 158 WEAMEECQRHGL--TK-SIGVSNFSPKKIETILAFATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 158 ~~~l~~l~~~G~--ir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~s 225 (263)
|+.+.+|.+.-. |. ..|=+.++...+.++++.. ++ ++|+..+-+ ..-.+++..|+++|+.++..+
T Consensus 262 ~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d--~i~ik~~~~GGitea~~ia~lA~~~gi~v~~h~ 332 (415)
T 2p3z_A 262 YEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-ID--IMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHG 332 (415)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CS--EECCCHHHHTCHHHHHHHHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CC--EEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 556666665432 21 3344567888888888865 54 676665432 223579999999999988754
No 235
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=22.19 E-value=1.5e+02 Score=25.06 Aligned_cols=49 Identities=6% Similarity=-0.065 Sum_probs=28.5
Q ss_pred CCHHHHHHHHHhCCCCCeeeccccCCCCC-cHHHHHHHHhCCceEEEccC
Q 024751 178 FSPKKIETILAFATIPPTVNQVEMNPAWQ-QRKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 178 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~~-~~~~i~~~~~~gi~v~a~sp 226 (263)
.+.+.++++++..+.+.++.....++... -.++.+.|+++|+.++.-.+
T Consensus 156 ~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~ 205 (420)
T 3gbx_A 156 IDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMA 205 (420)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECT
T ss_pred cCHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECC
Confidence 46777777776533443333222222222 25788888888888877555
No 236
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=21.86 E-value=2.7e+02 Score=22.83 Aligned_cols=99 Identities=9% Similarity=-0.055 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHcCCcEE---eCCCCcC-C---HHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHH
Q 024751 42 ESAMKSAVLESIKLGYRHF---DTASLYG-T---ERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKS 114 (263)
Q Consensus 42 ~~~~~~~l~~A~~~Gi~~~---DtA~~Yg-s---e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~s 114 (263)
...+..+.++.++.|.+.| -....+. . ...+-+++++. |+ + ..+.. ...+.+...+.+++.
T Consensus 159 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~---g~--~---~~~~~----~~~~~~~~~~~~~~l 226 (333)
T 3jvd_A 159 EAGFFQLTESVLGGSGMNIAALVGEESLSTTQERMRGISHAASIY---GA--E---VTFHF----GHYSVESGEEMAQVV 226 (333)
T ss_dssp HHHHHHHHHHHCCSSSCEEEEEESCTTSHHHHHHHHHHHHHHHHT---TC--E---EEEEE----CCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHC---CC--C---EEEec----CCCCHHHHHHHHHHH
Confidence 4456667777778897743 3322222 2 22333444443 42 2 22220 234567777778877
Q ss_pred HHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCC-----ccEEEecCC
Q 024751 115 LKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGL-----TKSIGVSNF 178 (263)
Q Consensus 115 L~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~-----ir~iGvs~~ 178 (263)
|++-. +|.++..+ ..-++.+++.|++.|+ |.-+|+-+.
T Consensus 227 l~~~~---~~ai~~~n-----------------------d~~A~g~~~al~~~G~~vP~disvig~D~~ 269 (333)
T 3jvd_A 227 FNNGL---PDALIVAS-----------------------PRLMAGVMRAFTRLNVRVPHDVVIGGYDDP 269 (333)
T ss_dssp HHTCC---CSEEEECC-----------------------HHHHHHHHHHHHHTTCCTTTTCEEEEESCC
T ss_pred hcCCC---CcEEEECC-----------------------HHHHHHHHHHHHHcCCCCCCceEEEEECCh
Confidence 76533 88888774 2456677888888886 344555443
No 237
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=21.39 E-value=3.9e+02 Score=22.94 Aligned_cols=34 Identities=6% Similarity=-0.081 Sum_probs=23.7
Q ss_pred HHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCC
Q 024751 161 MEECQRHGLTKSIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 161 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
+.++++.=.+--|+...++.+..+++++....+.
T Consensus 293 ~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~ 326 (376)
T 1icp_A 293 LVPMRKAYKGTFIVAGGYDREDGNRALIEDRADL 326 (376)
T ss_dssp SHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcE
Confidence 3444444456677877888899999998776663
No 238
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=21.37 E-value=4.2e+02 Score=23.26 Aligned_cols=123 Identities=10% Similarity=0.042 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhcCCCCCCccEEEeeCCCCC-------------CCChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCC
Q 024751 71 ALGEAIAEALKLGLVASREELFITTKLWCS-------------DAHRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPS 137 (263)
Q Consensus 71 ~lG~al~~~~~~~~~~~R~~~~I~tK~~~~-------------~~~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~ 137 (263)
.+-+++++. | ...++.|..-.... ..+++...+.+++.++.+ +++++..|...
T Consensus 223 ~i~~Air~a---G---y~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y-----~i~~IEdPl~~--- 288 (417)
T 3qn3_A 223 LLMTCIKKA---G---YENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKY-----PICSIEDGLAE--- 288 (417)
T ss_dssp HHHHHHHHT---T---CTTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHS-----CEEEEESSSCT---
T ss_pred HHHHHHHHc---C---CCCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhc-----ceeEEecCCCc---
Confidence 344666654 5 34578877765321 124555555555555543 58888877431
Q ss_pred ccccCCCCccccccCCHHHHHHHHHHHHHc-C-CccEEE-ecCCC-HHHHHHHHHhCCCCCeeeccccCCCC---CcHHH
Q 024751 138 EKLRNDIPEEDLVSLDYNGVWEAMEECQRH-G-LTKSIG-VSNFS-PKKIETILAFATIPPTVNQVEMNPAW---QQRKL 210 (263)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G-~ir~iG-vs~~~-~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~ 210 (263)
+-|+.+.+|.++ | .|.-+| =+.++ ++.+.++++....+ ++|+..+-.- .-.++
T Consensus 289 ------------------dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d--~i~iKv~qiGGiTea~ki 348 (417)
T 3qn3_A 289 ------------------NDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMAN--AVLIKPNQIGTITQTMRT 348 (417)
T ss_dssp ------------------TCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCS--EEEECHHHHCSHHHHHHH
T ss_pred ------------------ccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCC--EEEecCCCCCCHHHHHHH
Confidence 124555555544 3 444333 23344 88999999877655 6666654322 23578
Q ss_pred HHHHHhCCceEEEccCC
Q 024751 211 VEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 211 i~~~~~~gi~v~a~spl 227 (263)
+..|+++|+.++.-...
T Consensus 349 a~lA~~~G~~v~vsh~s 365 (417)
T 3qn3_A 349 VRLAQRNNYKCVMSHRS 365 (417)
T ss_dssp HHHHHHTTCEEEEECCS
T ss_pred HHHHHHcCCeEEEeCCC
Confidence 99999999998764443
No 239
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=21.36 E-value=1.4e+02 Score=24.68 Aligned_cols=53 Identities=19% Similarity=0.192 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHH-cCCcc
Q 024751 107 VVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQR-HGLTK 171 (263)
Q Consensus 107 i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~ir 171 (263)
-++.+.+.|+.||+..=|.+++|.--...- +..-....++++|.+.+. +|-+-
T Consensus 16 t~~~l~~~L~~LGi~~Gd~llVHsSl~~lG------------~v~gg~~~vi~AL~~~vg~~GTLv 69 (268)
T 3ijw_A 16 TIKTITNDLRKLGLKKGMTVIVHSSLSSIG------------WISGGAVAVVEALMEVITEEGTII 69 (268)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECTGGGC------------CBTTHHHHHHHHHHHHHCTTSEEE
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhC------------CCCCCHHHHHHHHHHHhCCCCeEE
Confidence 346678888999999999999996422110 001125788889988875 66543
No 240
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=21.28 E-value=69 Score=22.71 Aligned_cols=22 Identities=9% Similarity=0.093 Sum_probs=19.3
Q ss_pred cHHHHHHHHhCCceEEEccCCC
Q 024751 207 QRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 207 ~~~~i~~~~~~gi~v~a~spl~ 228 (263)
..+.+.||+++|+.+....|--
T Consensus 69 kE~AiayAek~G~~y~V~ep~~ 90 (108)
T 2lju_A 69 RELAIAYAVAHKIDYTVLQDNP 90 (108)
T ss_dssp HHHHHHHHHHTTCEEEEECSSC
T ss_pred HHHHHHHHHHcCCEEEEecCCc
Confidence 4689999999999999988864
No 241
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=21.22 E-value=1.2e+02 Score=25.63 Aligned_cols=49 Identities=6% Similarity=0.011 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHhCCCCCeeeccccCCCCCc-HHHHHHHHhCCceEEEccC
Q 024751 178 FSPKKIETILAFATIPPTVNQVEMNPAWQQ-RKLVEFCKSKSIIVTAFSP 226 (263)
Q Consensus 178 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~-~~~i~~~~~~gi~v~a~sp 226 (263)
.+.+.+++++...+.+.++.....|+.... .++.+.|+++|+.++.-.+
T Consensus 159 ~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~ 208 (425)
T 3ecd_A 159 IDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMA 208 (425)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECG
T ss_pred cCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 367777777764344433332222322222 5788888888888876555
No 242
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=21.20 E-value=3.7e+02 Score=22.58 Aligned_cols=50 Identities=10% Similarity=0.183 Sum_probs=29.9
Q ss_pred CCHHHHHHHHHhCCCCCeeeccccCCCCC------cHHHHHHHHhCCceEEEccCCC
Q 024751 178 FSPKKIETILAFATIPPTVNQVEMNPAWQ------QRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 178 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~~------~~~~i~~~~~~gi~v~a~spl~ 228 (263)
.+.+.++++++. +.+.+++....|+.-. -.++.++|+++|+.++.-...+
T Consensus 162 ~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 217 (422)
T 3fvs_A 162 LDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQ 217 (422)
T ss_dssp CCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccch
Confidence 466666665532 2333333333333321 1578999999999999877665
No 243
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=20.82 E-value=4.4e+02 Score=23.28 Aligned_cols=148 Identities=14% Similarity=0.098 Sum_probs=86.2
Q ss_pred CChHHHHHHHHHHHHc-CCcEEeCCCCc-C--CHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCCCCChhHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKL-GYRHFDTASLY-G--TERALGEAIAEALKLGLVASREELFITTKLWCSDAHRDLVVPALKKSL 115 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Y-g--se~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~~~~~~~i~~~~~~sL 115 (263)
.++++..+..+.+++. |++.|=.=-.. . .+...=+++|+. - +++-|..-.. ...+++.. .+.+
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea-------~-~d~~L~vDaN-~~w~~~~A----i~~~ 258 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAA-------F-PDHPLRLDPN-AAWTPQTS----VKVA 258 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHH-------C-TTSCEEEECT-TCSCHHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHh-------C-CCCcEEEECC-CCCCHHHH----HHHH
Confidence 4677888888888875 99877432111 1 122223455655 2 2333333321 22333332 2334
Q ss_pred HHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCC
Q 024751 116 KTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPP 194 (263)
Q Consensus 116 ~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~ 194 (263)
+.|. + + +.++..|.+ -++.+.++++.-.|. +.|=+-++..++.++++...++
T Consensus 259 ~~L~-~-~-l~~iEeP~~-----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d- 311 (445)
T 3vdg_A 259 AGLE-G-V-LEYLEDPTP-----------------------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQ- 311 (445)
T ss_dssp HHTT-T-T-CSEEECCSS-----------------------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCS-
T ss_pred HHHh-h-H-HHeeeCCCC-----------------------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCC-
Confidence 5554 2 3 777777621 134666776653332 4455677888899999877666
Q ss_pred eeeccccCCC---CCcHHHHHHHHhCCceEEEccCCC
Q 024751 195 TVNQVEMNPA---WQQRKLVEFCKSKSIIVTAFSPLG 228 (263)
Q Consensus 195 ~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a~spl~ 228 (263)
++|....-+ ..-..+...|+++|+.+..++...
T Consensus 312 -iv~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~e 347 (445)
T 3vdg_A 312 -VVLSDHHYWGGLQRSRLLAGICDTFGLGLSMHSNSH 347 (445)
T ss_dssp -EEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCCSC
T ss_pred -EEeeCcceeCCHHHHHHHHHHHHHcCCEEEEeCCcc
Confidence 676654332 223579999999999999987653
No 244
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=20.60 E-value=3.5e+02 Score=22.05 Aligned_cols=14 Identities=21% Similarity=0.264 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHcCC
Q 024751 156 GVWEAMEECQRHGL 169 (263)
Q Consensus 156 ~~~~~l~~l~~~G~ 169 (263)
-++.+++.|++.|+
T Consensus 253 ~A~g~~~al~~~G~ 266 (338)
T 3dbi_A 253 MAIGAMKALHERGV 266 (338)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 34445555555554
No 245
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=20.55 E-value=85 Score=26.27 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=38.9
Q ss_pred cccCeeceeccccC------C-----ChHHHHHHHHHHHHc-CCcEEeCCCCcC---CHHHHHHHHHHH
Q 024751 26 RKMPVIGLGSAVDN------I-----DESAMKSAVLESIKL-GYRHFDTASLYG---TERALGEAIAEA 79 (263)
Q Consensus 26 ~~v~~iglG~~~~~------~-----~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg---se~~lG~al~~~ 79 (263)
..-|+.|+|+|.++ . ++....+.++.+-+. |+..++....+. .-+.+.+++++.
T Consensus 5 ~~~~~~~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~ 73 (333)
T 3ktc_A 5 YNYPEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDA 73 (333)
T ss_dssp CCCCCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHH
T ss_pred cCCCcceeeeeeeecccccccCCCCCCCCCHHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHc
Confidence 34578899998876 1 233457889999999 999998764443 456677788876
No 246
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=20.53 E-value=3.2e+02 Score=21.62 Aligned_cols=151 Identities=13% Similarity=0.092 Sum_probs=82.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEeCCCCcCCHHHHHHHHHHHHhcCCCCCCccEEEeeCCCCC--CCChhHHHHHHHHHHHH
Q 024751 40 IDESAMKSAVLESIKLGYRHFDTASLYGTERALGEAIAEALKLGLVASREELFITTKLWCS--DAHRDLVVPALKKSLKT 117 (263)
Q Consensus 40 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Ygse~~lG~al~~~~~~~~~~~R~~~~I~tK~~~~--~~~~~~i~~~~~~sL~~ 117 (263)
.+.++..++++.|.+.|..-+-..+.| +-.+-+.+ ...++.|++-+..+ ..+.+.....+++.++
T Consensus 16 ~t~~~i~~l~~~a~~~~~~aVcv~p~~-----v~~~~~~l-------~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~- 82 (220)
T 1ub3_A 16 ATLEEVAKAAEEALEYGFYGLCIPPSY-----VAWVRARY-------PHAPFRLVTVVGFPLGYQEKEVKALEAALACA- 82 (220)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCGGG-----HHHHHHHC-------TTCSSEEEEEESTTTCCSCHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECHHH-----HHHHHHHh-------CCCCceEEEEecCCCCCCchHHHHHHHHHHHH-
Confidence 467889999999999999988877766 22222221 22345566665332 2444555566676666
Q ss_pred hCCCcccEEEee-cCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcC---CccEE-EecCCCHHHHHHHHHh---
Q 024751 118 LQIEYVDLYLIH-WPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHG---LTKSI-GVSNFSPKKIETILAF--- 189 (263)
Q Consensus 118 Lg~~~iDl~~lh-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G---~ir~i-Gvs~~~~~~l~~~~~~--- 189 (263)
+|.|-+|+++-- +.- .-+.....+.+.+.++.- .++-| -.+-.+.+++..+.+.
T Consensus 83 ~GAdevd~vinig~~~------------------~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~e 144 (220)
T 1ub3_A 83 RGADEVDMVLHLGRAK------------------AGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIR 144 (220)
T ss_dssp TTCSEEEEECCHHHHH------------------TTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHH
T ss_pred cCCCEEEecccchhhh------------------CCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 799999987632 210 112456666777766642 23333 2233456665555443
Q ss_pred CCCCCeeeccc--cCCCCCcH---HHHHHHHhCCceEEE
Q 024751 190 ATIPPTVNQVE--MNPAWQQR---KLVEFCKSKSIIVTA 223 (263)
Q Consensus 190 ~~~~~~~~q~~--~~~~~~~~---~~i~~~~~~gi~v~a 223 (263)
.+.+ ++... |++-.... +++...-...++|.+
T Consensus 145 aGAD--fVKTsTGf~~~gat~~dv~~m~~~vg~~v~Vka 181 (220)
T 1ub3_A 145 GGAD--FLKTSTGFGPRGASLEDVALLVRVAQGRAQVKA 181 (220)
T ss_dssp HTCS--EEECCCSSSSCCCCHHHHHHHHHHHTTSSEEEE
T ss_pred hCCC--EEEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEE
Confidence 3444 44444 44322222 222222245677766
No 247
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=20.50 E-value=3.5e+02 Score=22.08 Aligned_cols=52 Identities=6% Similarity=0.021 Sum_probs=26.1
Q ss_pred CeeeccccCCCCCc--HHHHHHHHhCCceEEEccCCCCCCCCCCCCCCCCcHHHHHHHHHhCCC
Q 024751 194 PTVNQVEMNPAWQQ--RKLVEFCKSKSIIVTAFSPLGAVGSSWGTNQVMNNEALKQIAALQQGE 255 (263)
Q Consensus 194 ~~~~q~~~~~~~~~--~~~i~~~~~~gi~v~a~spl~~~G~l~~~~~~l~~~~l~~ia~~~~~t 255 (263)
|.+.+.-||+..+. ...++.|.+.|+--+...-+.- .....+.+.+++||..
T Consensus 97 Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~----------ee~~~~~~~~~~~gl~ 150 (267)
T 3vnd_A 97 PIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPV----------EESAPFSKAAKAHGIA 150 (267)
T ss_dssp CEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCG----------GGCHHHHHHHHHTTCE
T ss_pred CEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCH----------hhHHHHHHHHHHcCCe
Confidence 34444444654331 4566667776665544322211 1234566777777654
No 248
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=20.45 E-value=4.3e+02 Score=23.05 Aligned_cols=67 Identities=15% Similarity=0.122 Sum_probs=47.2
Q ss_pred HHHHHHHHcCCcc-EEEecCCCHHHHHHHHHhCCCCCeeeccccCCCC---CcHHHHHHHHhCCceEEEccCC
Q 024751 159 EAMEECQRHGLTK-SIGVSNFSPKKIETILAFATIPPTVNQVEMNPAW---QQRKLVEFCKSKSIIVTAFSPL 227 (263)
Q Consensus 159 ~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~~~~~i~~~~~~gi~v~a~spl 227 (263)
+.+.++++.-.|- ..|=+-++...+.++++...++ ++|+...-+- .-..+...|+++|+.++..++.
T Consensus 267 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 267 ESFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQWID--YIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp THHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred HHHHHHHhhCCCCEEEccCcCCHHHHHHHHHcCCCC--eEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 4566676654443 2334556788899999876655 7777765442 2257999999999999998885
No 249
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=20.43 E-value=5.1e+02 Score=23.92 Aligned_cols=77 Identities=10% Similarity=0.138 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHcCCcEEeCC-------------------CCcC-C----HHHHHHHHHHHHhcCCCCCCccEEEeeCCCC
Q 024751 44 AMKSAVLESIKLGYRHFDTA-------------------SLYG-T----ERALGEAIAEALKLGLVASREELFITTKLWC 99 (263)
Q Consensus 44 ~~~~~l~~A~~~Gi~~~DtA-------------------~~Yg-s----e~~lG~al~~~~~~~~~~~R~~~~I~tK~~~ 99 (263)
+..+.-+.|.++|+..++.- +.|| + -+.+-+.++...+. -.+++-|..|+..
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~----vG~~~~v~vrls~ 217 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRER----VGNDFIIIYRLSM 217 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH----HCSSSEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHH----cCCCceEEEEECc
Confidence 34455566788999888762 3366 2 12233333332111 2345667777632
Q ss_pred -----CCCChhHHHHHHHHHHHHhCCCcccE
Q 024751 100 -----SDAHRDLVVPALKKSLKTLQIEYVDL 125 (263)
Q Consensus 100 -----~~~~~~~i~~~~~~sL~~Lg~~~iDl 125 (263)
...+.+.. ..+-+.|+..|+||+++
T Consensus 218 ~~~~~~g~~~~~~-~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 218 LDLVEDGGTFAET-VELAQAIEAAGATIINT 247 (671)
T ss_dssp ECCSTTCCCHHHH-HHHHHHHHHHTCSEEEE
T ss_pred cccCCCCCCHHHH-HHHHHHHHhcCCCEEEc
Confidence 23344433 23446678889877765
No 250
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=20.37 E-value=3.7e+02 Score=22.21 Aligned_cols=66 Identities=14% Similarity=0.212 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEEcc
Q 024751 154 YNGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTAFS 225 (263)
Q Consensus 154 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a~s 225 (263)
...+...++.+++.+. .|.|=++.++..+++++.+- + .+| ..+-.....++++.+.+++++++.|-
T Consensus 67 ~~Rv~pvi~~l~~~~v--~iSIDT~~~~Va~~al~aGa-~-iIN--DVs~g~~d~~m~~~va~~~~~~vlMH 132 (270)
T 4hb7_A 67 LNRVLPVVEAIVGFDV--KISVDTFRSEVAEACLKLGV-D-MIN--DQWAGLYDHRMFQIVAKYDAEIILMH 132 (270)
T ss_dssp HHHHHHHHHHHTTSSS--EEEEECSCHHHHHHHHHHTC-C-EEE--ETTTTSSCTHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHhhcCCC--eEEEECCCHHHHHHHHHhcc-c-eec--cccccccchhHHHHHHHcCCCeEEec
Confidence 3445566677766543 57788999999999998653 3 133 33444455789999999999999885
No 251
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=20.11 E-value=4.3e+02 Score=22.98 Aligned_cols=96 Identities=7% Similarity=0.028 Sum_probs=59.3
Q ss_pred ChhHHHHHHHHHHHHhCCCcccEEEeecCCCCCCCccccCCCCccccccCCHHHHHHHHHHHHHcCCccEE-Eec-CCCH
Q 024751 103 HRDLVVPALKKSLKTLQIEYVDLYLIHWPMSAKPSEKLRNDIPEEDLVSLDYNGVWEAMEECQRHGLTKSI-GVS-NFSP 180 (263)
Q Consensus 103 ~~~~i~~~~~~sL~~Lg~~~iDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs-~~~~ 180 (263)
+++...+.+.+.|+. .+++++..|.+. +-|+.+.+|.+.-.|.=. |=+ ..+.
T Consensus 268 ~~~~ai~~~~~~l~~-----~~i~~iEeP~~~---------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~ 321 (427)
T 2pa6_A 268 TREELLDYYKALVDE-----YPIVSIEDPFHE---------------------EDFEGFAMITKELDIQIVGDDLFVTNV 321 (427)
T ss_dssp CHHHHHHHHHHHHHH-----SCEEEEECCSCT---------------------TCHHHHHHHHHHSSSEEEESTTTTTCH
T ss_pred CHHHHHHHHHHHHhh-----CCCcEEEcCCCh---------------------hhHHHHHHHHhhCCCeEEeCccccCCH
Confidence 444544444555554 468888888431 124667777766544322 222 2348
Q ss_pred HHHHHHHHhCCCCCeeeccccCCC---CCcHHHHHHHHhCCceEEE-ccC
Q 024751 181 KKIETILAFATIPPTVNQVEMNPA---WQQRKLVEFCKSKSIIVTA-FSP 226 (263)
Q Consensus 181 ~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~i~~~~~~gi~v~a-~sp 226 (263)
..+.++++...++ ++|+..+-+ ..-.++...|+++|+.++. +..
T Consensus 322 ~~~~~~i~~~a~d--~i~ik~~~~GGitea~~ia~lA~~~g~~~~~~h~~ 369 (427)
T 2pa6_A 322 ERLRKGIEMKAAN--ALLLKVNQIGTLSEAVDAAQLAFRNGYGVVVSHRS 369 (427)
T ss_dssp HHHHHHHHHTCCS--EEEECHHHHCSHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHhCCCC--EEEEcccccCCHHHHHHHHHHHHHcCCeEEEeCCC
Confidence 8999998876655 666655432 2235799999999999876 544
No 252
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=20.09 E-value=4.3e+02 Score=22.89 Aligned_cols=69 Identities=19% Similarity=0.144 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCCeeeccccCCCCCcHHHHHHHHhCCceEEE
Q 024751 155 NGVWEAMEECQRHGLTKSIGVSNFSPKKIETILAFATIPPTVNQVEMNPAWQQRKLVEFCKSKSIIVTA 223 (263)
Q Consensus 155 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~i~~~~~~gi~v~a 223 (263)
.+..+++.+.++.=.|=-++=-.|++..+.++++.+--+..+|.-++.--.+-.++++.|+++|+++-.
T Consensus 70 ~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRI 138 (366)
T 3noy_A 70 KEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRI 138 (366)
T ss_dssp HHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEE
T ss_pred hHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEE
Confidence 455678888888755555555578988887777753223334444432211125799999999998765
Done!